Query 041488
Match_columns 402
No_of_seqs 212 out of 2567
Neff 11.0
Searched_HMMs 46136
Date Fri Mar 29 07:41:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041488.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041488hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02872 triacylglycerol lipas 100.0 9.8E-49 2.1E-53 350.6 27.8 353 42-401 34-388 (395)
2 KOG2624 Triglyceride lipase-ch 100.0 6.9E-44 1.5E-48 313.5 23.2 351 41-401 37-397 (403)
3 PHA02857 monoglyceride lipase; 100.0 7.3E-31 1.6E-35 229.7 18.1 269 55-402 4-273 (276)
4 PLN02385 hydrolase; alpha/beta 100.0 8E-30 1.7E-34 229.9 21.7 272 56-402 66-345 (349)
5 KOG1455 Lysophospholipase [Lip 100.0 2.5E-30 5.4E-35 212.8 15.3 274 52-402 28-312 (313)
6 PRK10749 lysophospholipase L2; 100.0 1.1E-29 2.4E-34 226.8 19.5 134 54-205 33-167 (330)
7 PLN02824 hydrolase, alpha/beta 100.0 1.6E-29 3.4E-34 223.2 18.2 278 58-402 14-294 (294)
8 TIGR02240 PHA_depoly_arom poly 100.0 4.1E-29 8.9E-34 218.4 18.8 258 57-401 7-265 (276)
9 PLN02298 hydrolase, alpha/beta 100.0 2.2E-28 4.7E-33 219.3 23.9 275 55-402 36-317 (330)
10 COG2267 PldB Lysophospholipase 100.0 5.4E-29 1.2E-33 216.2 18.1 278 52-401 10-293 (298)
11 PRK03592 haloalkane dehalogena 100.0 5.6E-29 1.2E-33 219.8 17.0 117 56-204 11-128 (295)
12 PRK00870 haloalkane dehalogena 100.0 2.1E-28 4.5E-33 216.7 20.5 104 80-203 45-149 (302)
13 PLN02652 hydrolase; alpha/beta 100.0 1.7E-27 3.6E-32 215.0 24.2 267 56-401 115-386 (395)
14 PRK06489 hypothetical protein; 100.0 3.3E-27 7.2E-32 213.5 23.9 135 58-204 46-189 (360)
15 KOG4178 Soluble epoxide hydrol 100.0 5.1E-28 1.1E-32 202.7 16.5 289 54-401 24-319 (322)
16 PLN02578 hydrolase 100.0 3.8E-27 8.3E-32 212.4 21.0 268 58-400 72-353 (354)
17 TIGR03343 biphenyl_bphD 2-hydr 100.0 3.2E-27 7E-32 207.5 20.0 251 81-400 30-281 (282)
18 PLN02679 hydrolase, alpha/beta 100.0 2.8E-27 6.1E-32 213.5 18.8 120 60-204 69-191 (360)
19 PRK03204 haloalkane dehalogena 100.0 3E-27 6.4E-32 207.0 17.8 125 49-204 11-136 (286)
20 PLN02965 Probable pheophorbida 100.0 2.9E-27 6.4E-32 204.1 16.4 241 83-401 5-252 (255)
21 PLN03087 BODYGUARD 1 domain co 99.9 6.6E-27 1.4E-31 213.6 18.2 285 56-401 180-478 (481)
22 KOG4409 Predicted hydrolase/ac 99.9 2.4E-26 5.2E-31 193.0 17.3 282 56-401 70-363 (365)
23 TIGR03056 bchO_mg_che_rel puta 99.9 2.1E-26 4.5E-31 202.0 17.9 267 56-400 10-278 (278)
24 COG1647 Esterase/lipase [Gener 99.9 8.5E-27 1.8E-31 182.4 13.2 229 81-401 15-243 (243)
25 TIGR03611 RutD pyrimidine util 99.9 3.8E-26 8.3E-31 197.8 19.0 246 79-401 11-257 (257)
26 PRK10349 carboxylesterase BioH 99.9 1.4E-26 3.1E-31 200.3 15.1 240 82-401 14-255 (256)
27 PRK10673 acyl-CoA esterase; Pr 99.9 5.3E-26 1.1E-30 196.8 18.6 240 79-402 14-255 (255)
28 TIGR01607 PST-A Plasmodium sub 99.9 4.5E-26 9.8E-31 202.8 18.4 277 56-400 2-331 (332)
29 TIGR01836 PHA_synth_III_C poly 99.9 4.7E-25 1E-29 198.7 24.0 282 80-402 61-350 (350)
30 PRK07581 hypothetical protein; 99.9 1.9E-26 4.2E-31 207.4 14.8 293 60-401 24-335 (339)
31 TIGR02427 protocat_pcaD 3-oxoa 99.9 2.4E-25 5.3E-30 191.9 20.4 239 80-400 12-251 (251)
32 PRK13604 luxD acyl transferase 99.9 8E-26 1.7E-30 192.2 16.8 131 53-205 11-142 (307)
33 PLN03084 alpha/beta hydrolase 99.9 4E-25 8.7E-30 198.3 21.9 272 57-401 110-383 (383)
34 KOG1454 Predicted hydrolase/ac 99.9 7E-26 1.5E-30 198.6 16.3 263 79-401 56-323 (326)
35 TIGR01738 bioH putative pimelo 99.9 1.5E-25 3.3E-30 192.5 14.5 242 81-399 4-245 (245)
36 TIGR01250 pro_imino_pep_2 prol 99.9 1.4E-24 3.1E-29 191.2 20.0 125 56-204 6-131 (288)
37 PLN02511 hydrolase 99.9 1.4E-24 3E-29 197.1 20.2 135 54-204 74-210 (388)
38 PRK10985 putative hydrolase; P 99.9 1.2E-24 2.6E-29 193.8 18.3 136 53-205 33-169 (324)
39 TIGR01392 homoserO_Ac_trn homo 99.9 1.8E-24 3.9E-29 195.1 18.1 129 59-205 13-163 (351)
40 PLN02894 hydrolase, alpha/beta 99.9 2.9E-24 6.3E-29 195.8 19.6 128 56-207 84-214 (402)
41 PRK08775 homoserine O-acetyltr 99.9 3.5E-24 7.6E-29 192.6 19.2 118 56-205 40-174 (343)
42 TIGR01249 pro_imino_pep_1 prol 99.9 3.5E-24 7.7E-29 189.7 18.3 123 54-204 7-130 (306)
43 PLN02211 methyl indole-3-aceta 99.9 5E-24 1.1E-28 184.8 18.4 116 59-203 4-121 (273)
44 PRK11126 2-succinyl-6-hydroxy- 99.9 2.2E-24 4.8E-29 185.1 16.1 99 81-204 2-102 (242)
45 PRK14875 acetoin dehydrogenase 99.9 5.1E-24 1.1E-28 194.7 16.6 116 60-205 117-233 (371)
46 PRK05077 frsA fermentation/res 99.9 4.2E-23 9.1E-28 188.1 20.5 244 48-402 164-412 (414)
47 PRK00175 metX homoserine O-ace 99.9 2E-23 4.3E-28 189.7 18.0 135 60-205 31-183 (379)
48 PF12697 Abhydrolase_6: Alpha/ 99.9 2.3E-24 4.9E-29 182.8 10.9 101 84-205 1-102 (228)
49 TIGR01838 PHA_synth_I poly(R)- 99.9 7.3E-23 1.6E-27 188.9 21.4 265 80-383 187-459 (532)
50 TIGR03695 menH_SHCHC 2-succiny 99.9 1.4E-23 3.1E-28 180.7 15.4 104 81-204 1-105 (251)
51 KOG4391 Predicted alpha/beta h 99.9 8.9E-23 1.9E-27 158.7 15.3 240 35-401 37-281 (300)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 2.1E-22 4.6E-27 174.8 17.6 126 58-205 8-135 (274)
53 PRK05855 short chain dehydroge 99.9 1.1E-21 2.3E-26 190.4 20.2 124 54-201 5-128 (582)
54 PRK10566 esterase; Provisional 99.9 1.6E-21 3.5E-26 167.9 17.5 220 79-402 25-248 (249)
55 PRK07868 acyl-CoA synthetase; 99.9 2.6E-21 5.7E-26 195.9 19.8 281 79-402 65-361 (994)
56 PLN02980 2-oxoglutarate decarb 99.9 1.7E-21 3.6E-26 203.8 17.1 110 80-204 1370-1480(1655)
57 KOG1552 Predicted alpha/beta h 99.9 1.6E-21 3.4E-26 157.9 11.7 213 51-400 34-250 (258)
58 KOG2382 Predicted alpha/beta h 99.9 1E-20 2.2E-25 159.2 15.3 256 79-402 50-313 (315)
59 PRK11071 esterase YqiA; Provis 99.9 6.8E-21 1.5E-25 155.2 13.5 89 82-204 2-93 (190)
60 COG0429 Predicted hydrolase of 99.9 2.9E-20 6.2E-25 155.8 15.8 281 55-401 53-339 (345)
61 KOG1838 Alpha/beta hydrolase [ 99.8 2.3E-20 5.1E-25 162.3 15.1 132 56-201 98-232 (409)
62 PF12695 Abhydrolase_5: Alpha/ 99.8 4.3E-21 9.3E-26 150.9 8.9 143 83-379 1-145 (145)
63 KOG2984 Predicted hydrolase [G 99.8 1.3E-20 2.7E-25 145.1 10.7 246 58-401 27-275 (277)
64 PRK06765 homoserine O-acetyltr 99.8 9.3E-20 2E-24 164.1 17.3 314 56-401 30-387 (389)
65 TIGR01839 PHA_synth_II poly(R) 99.8 1.9E-18 4.1E-23 157.7 21.9 267 79-383 213-485 (560)
66 COG1506 DAP2 Dipeptidyl aminop 99.8 3.7E-19 8.1E-24 170.9 16.1 240 56-402 370-616 (620)
67 KOG4667 Predicted esterase [Li 99.8 5.7E-20 1.2E-24 143.1 8.0 109 79-204 31-139 (269)
68 PF00561 Abhydrolase_1: alpha/ 99.8 3E-20 6.6E-25 158.1 6.5 77 115-203 1-78 (230)
69 TIGR03101 hydr2_PEP hydrolase, 99.8 5.7E-19 1.2E-23 150.0 11.1 130 56-205 5-135 (266)
70 PF00326 Peptidase_S9: Prolyl 99.8 3.8E-19 8.3E-24 149.1 9.4 201 104-402 4-209 (213)
71 PRK11460 putative hydrolase; P 99.8 6.7E-18 1.4E-22 142.5 13.9 185 79-400 14-206 (232)
72 COG4757 Predicted alpha/beta h 99.8 3.7E-18 8E-23 134.7 11.0 268 54-399 8-280 (281)
73 TIGR01849 PHB_depoly_PhaZ poly 99.8 3.2E-17 7E-22 145.7 18.0 285 81-402 102-406 (406)
74 KOG2564 Predicted acetyltransf 99.8 1.4E-17 3E-22 135.2 13.2 109 79-203 72-181 (343)
75 PLN02442 S-formylglutathione h 99.7 5.2E-17 1.1E-21 141.4 15.8 139 59-205 27-179 (283)
76 PLN00021 chlorophyllase 99.7 3.2E-17 6.8E-22 143.3 13.1 103 79-204 50-166 (313)
77 TIGR02821 fghA_ester_D S-formy 99.7 1.5E-16 3.2E-21 138.4 15.8 138 58-205 21-174 (275)
78 COG3243 PhaC Poly(3-hydroxyalk 99.7 1.2E-15 2.6E-20 132.1 19.0 307 56-400 79-397 (445)
79 PF05448 AXE1: Acetyl xylan es 99.7 1.4E-16 3.1E-21 139.3 13.4 246 56-402 61-320 (320)
80 COG2945 Predicted hydrolase of 99.7 9.1E-17 2E-21 123.6 10.0 178 79-400 26-205 (210)
81 COG2021 MET2 Homoserine acetyl 99.7 4.9E-15 1.1E-19 126.9 19.6 311 61-401 35-367 (368)
82 PF01738 DLH: Dienelactone hyd 99.7 2.4E-16 5.1E-21 132.6 11.0 193 79-402 12-217 (218)
83 TIGR01840 esterase_phb esteras 99.7 5.8E-16 1.3E-20 129.4 13.0 116 79-204 11-130 (212)
84 COG3458 Acetyl esterase (deace 99.7 3.9E-15 8.5E-20 120.7 14.8 240 56-400 61-315 (321)
85 PF02230 Abhydrolase_2: Phosph 99.6 1.1E-15 2.5E-20 127.9 10.5 60 334-401 155-214 (216)
86 PF06500 DUF1100: Alpha/beta h 99.6 2.9E-15 6.3E-20 131.9 13.3 134 47-205 160-297 (411)
87 COG0596 MhpC Predicted hydrola 99.6 9.7E-15 2.1E-19 126.7 16.5 101 81-205 21-124 (282)
88 PRK10162 acetyl esterase; Prov 99.6 9.4E-14 2E-18 123.2 20.1 125 52-205 57-196 (318)
89 PRK10115 protease 2; Provision 99.6 4.6E-14 1E-18 136.7 18.1 143 49-205 413-560 (686)
90 PF06342 DUF1057: Alpha/beta h 99.6 1.3E-13 2.9E-18 113.7 17.9 126 56-205 11-138 (297)
91 PF06821 Ser_hydrolase: Serine 99.6 1.1E-14 2.4E-19 115.6 9.5 86 84-204 1-91 (171)
92 COG3208 GrsT Predicted thioest 99.6 1.2E-13 2.6E-18 111.7 14.0 223 79-400 5-234 (244)
93 COG0412 Dienelactone hydrolase 99.6 2.1E-13 4.5E-18 114.6 15.6 210 56-401 7-232 (236)
94 COG0400 Predicted esterase [Ge 99.5 3.5E-13 7.6E-18 109.4 14.6 59 334-401 146-204 (207)
95 PF12146 Hydrolase_4: Putative 99.5 2.3E-14 5E-19 97.6 6.2 78 61-158 1-78 (79)
96 TIGR03230 lipo_lipase lipoprot 99.5 4E-14 8.6E-19 127.5 9.3 110 79-205 39-155 (442)
97 PF08538 DUF1749: Protein of u 99.5 3.8E-14 8.1E-19 119.8 8.5 111 80-210 32-154 (303)
98 TIGR00976 /NonD putative hydro 99.5 7.4E-14 1.6E-18 133.2 9.9 128 56-205 1-133 (550)
99 PF02273 Acyl_transf_2: Acyl t 99.5 4.8E-13 1E-17 107.1 11.1 127 54-203 5-133 (294)
100 cd00707 Pancreat_lipase_like P 99.5 6.1E-14 1.3E-18 121.1 6.1 109 79-204 34-147 (275)
101 PF12715 Abhydrolase_7: Abhydr 99.4 7E-13 1.5E-17 114.9 9.1 150 46-202 82-258 (390)
102 KOG2931 Differentiation-relate 99.4 3.9E-11 8.4E-16 99.1 18.0 280 52-401 22-305 (326)
103 PF02129 Peptidase_S15: X-Pro 99.4 3.9E-12 8.4E-17 110.6 12.5 132 60-206 1-138 (272)
104 KOG2281 Dipeptidyl aminopeptid 99.4 1.2E-11 2.5E-16 112.0 15.6 241 56-402 618-867 (867)
105 PRK05371 x-prolyl-dipeptidyl a 99.4 4E-12 8.7E-17 124.1 12.9 88 105-205 270-374 (767)
106 PF05728 UPF0227: Uncharacteri 99.4 9.1E-12 2E-16 100.0 12.2 88 84-205 2-92 (187)
107 PF03096 Ndr: Ndr family; Int 99.4 3E-11 6.4E-16 101.4 15.3 270 56-401 4-278 (283)
108 PF00975 Thioesterase: Thioest 99.4 1.5E-11 3.3E-16 104.4 13.2 101 82-203 1-103 (229)
109 KOG2100 Dipeptidyl aminopeptid 99.3 1.1E-11 2.4E-16 120.7 13.4 246 49-401 494-746 (755)
110 TIGR03502 lipase_Pla1_cef extr 99.3 2.6E-12 5.7E-17 123.0 8.7 125 56-187 422-575 (792)
111 KOG2565 Predicted hydrolases o 99.3 1.1E-11 2.4E-16 105.3 11.3 122 59-202 131-262 (469)
112 PF12740 Chlorophyllase2: Chlo 99.3 9.2E-12 2E-16 103.5 10.1 103 79-204 15-131 (259)
113 KOG3043 Predicted hydrolase re 99.3 3.6E-12 7.9E-17 101.0 7.3 171 104-402 57-240 (242)
114 PF10503 Esterase_phd: Esteras 99.3 1.1E-10 2.3E-15 96.0 13.8 116 80-205 15-133 (220)
115 PF11339 DUF3141: Protein of u 99.3 2.6E-09 5.6E-14 95.5 22.2 250 104-387 91-356 (581)
116 PF06028 DUF915: Alpha/beta hy 99.2 7.9E-11 1.7E-15 99.1 11.5 120 79-205 9-144 (255)
117 PF07859 Abhydrolase_3: alpha/ 99.2 6.7E-11 1.5E-15 99.0 11.2 103 84-206 1-112 (211)
118 PF09752 DUF2048: Uncharacteri 99.2 6.7E-10 1.4E-14 95.7 15.8 112 79-203 90-209 (348)
119 PF10230 DUF2305: Uncharacteri 99.2 4.8E-10 1E-14 96.3 14.2 117 81-207 2-125 (266)
120 COG3571 Predicted hydrolase of 99.2 2.5E-10 5.5E-15 85.3 10.3 108 80-203 13-123 (213)
121 KOG4627 Kynurenine formamidase 99.2 6.4E-10 1.4E-14 86.9 12.8 107 79-205 65-173 (270)
122 COG4188 Predicted dienelactone 99.2 1.3E-10 2.8E-15 100.4 8.5 100 80-189 70-181 (365)
123 COG3545 Predicted esterase of 99.1 1E-09 2.2E-14 84.1 11.9 60 334-399 117-176 (181)
124 PF07224 Chlorophyllase: Chlor 99.1 6.8E-10 1.5E-14 90.4 10.2 105 79-206 44-159 (307)
125 PF08840 BAAT_C: BAAT / Acyl-C 99.1 9.8E-11 2.1E-15 97.2 4.7 50 154-206 6-58 (213)
126 PF06057 VirJ: Bacterial virul 99.1 5.7E-10 1.2E-14 87.6 8.6 101 83-204 4-107 (192)
127 PF07819 PGAP1: PGAP1-like pro 99.1 3.8E-10 8.2E-15 94.2 7.9 106 80-204 3-123 (225)
128 PF03403 PAF-AH_p_II: Platelet 99.1 2.6E-10 5.6E-15 102.6 7.2 116 80-204 99-262 (379)
129 PF03583 LIP: Secretory lipase 99.1 5.4E-09 1.2E-13 91.0 14.8 62 334-401 219-280 (290)
130 COG4099 Predicted peptidase [G 99.1 4.3E-09 9.3E-14 87.1 13.1 135 53-203 163-303 (387)
131 KOG1515 Arylacetamide deacetyl 99.0 6.9E-08 1.5E-12 84.6 19.0 230 79-401 88-334 (336)
132 COG0657 Aes Esterase/lipase [L 99.0 2.2E-08 4.8E-13 89.1 15.5 110 79-207 77-194 (312)
133 PF01674 Lipase_2: Lipase (cla 99.0 2E-09 4.2E-14 88.5 7.9 90 82-187 2-95 (219)
134 PF03959 FSH1: Serine hydrolas 98.9 8.3E-10 1.8E-14 91.8 5.0 122 80-203 3-144 (212)
135 KOG2551 Phospholipase/carboxyh 98.9 1.8E-08 3.9E-13 80.3 11.9 57 334-401 163-219 (230)
136 PRK04940 hypothetical protein; 98.9 5.5E-08 1.2E-12 76.5 12.4 54 336-401 126-179 (180)
137 PF12048 DUF3530: Protein of u 98.9 3.7E-07 8.1E-12 80.1 18.9 140 56-204 67-229 (310)
138 PTZ00472 serine carboxypeptida 98.9 1E-06 2.3E-11 81.8 22.7 134 60-205 59-217 (462)
139 COG2936 Predicted acyl esteras 98.9 4.7E-08 1E-12 90.0 13.2 131 56-204 24-159 (563)
140 KOG3975 Uncharacterized conser 98.8 1.3E-07 2.8E-12 76.6 12.3 116 79-204 27-147 (301)
141 PLN02733 phosphatidylcholine-s 98.8 7.6E-09 1.6E-13 94.4 5.9 88 104-204 111-201 (440)
142 KOG2112 Lysophospholipase [Lip 98.8 3.2E-08 6.9E-13 78.4 8.3 58 335-400 145-202 (206)
143 PF04083 Abhydro_lipase: Parti 98.8 2.1E-08 4.6E-13 64.2 5.7 55 45-99 5-61 (63)
144 PRK10252 entF enterobactin syn 98.7 1.7E-07 3.8E-12 99.8 15.1 99 81-203 1068-1170(1296)
145 COG4814 Uncharacterized protei 98.7 7.9E-07 1.7E-11 72.4 14.2 118 81-205 45-177 (288)
146 PF05677 DUF818: Chlamydia CHL 98.7 2.7E-07 5.8E-12 78.9 11.4 117 56-189 116-237 (365)
147 PF00151 Lipase: Lipase; Inte 98.6 2.2E-08 4.8E-13 88.3 3.2 111 78-205 68-188 (331)
148 PF05990 DUF900: Alpha/beta hy 98.6 4.3E-08 9.4E-13 82.4 4.8 112 79-204 16-137 (233)
149 KOG1553 Predicted alpha/beta h 98.6 1.5E-07 3.3E-12 79.7 7.8 123 56-203 219-344 (517)
150 COG3319 Thioesterase domains o 98.5 1.7E-07 3.6E-12 78.9 5.8 102 82-205 1-104 (257)
151 PRK10439 enterobactin/ferric e 98.5 5.1E-06 1.1E-10 76.0 15.9 108 79-204 207-323 (411)
152 KOG4840 Predicted hydrolases o 98.4 1.8E-05 3.9E-10 63.2 15.0 105 81-205 36-145 (299)
153 KOG3847 Phospholipase A2 (plat 98.4 1.6E-06 3.4E-11 72.8 8.6 44 79-128 116-159 (399)
154 smart00824 PKS_TE Thioesterase 98.3 2.8E-06 6.2E-11 70.8 9.0 84 104-203 16-101 (212)
155 COG1505 Serine proteases of th 98.3 2.2E-05 4.8E-10 72.1 14.6 144 46-205 388-536 (648)
156 KOG3253 Predicted alpha/beta h 98.3 4.3E-06 9.3E-11 76.3 9.7 42 334-379 304-345 (784)
157 COG4782 Uncharacterized protei 98.3 1.8E-06 3.8E-11 74.5 6.0 112 79-204 114-234 (377)
158 COG3509 LpqC Poly(3-hydroxybut 98.3 6.8E-06 1.5E-10 69.0 9.2 132 59-204 42-179 (312)
159 COG1075 LipA Predicted acetylt 98.2 1.3E-06 2.8E-11 77.9 5.2 103 81-205 59-165 (336)
160 KOG3101 Esterase D [General fu 98.2 4.7E-06 1E-10 65.9 6.6 124 79-207 42-179 (283)
161 PF00756 Esterase: Putative es 98.2 1.7E-06 3.7E-11 74.4 4.7 118 79-205 22-151 (251)
162 COG0627 Predicted esterase [Ge 98.2 1.8E-05 3.8E-10 69.2 10.4 124 79-207 52-190 (316)
163 PF05057 DUF676: Putative seri 98.1 3.4E-06 7.3E-11 70.4 5.0 90 80-186 3-97 (217)
164 COG1073 Hydrolases of the alph 98.1 1.3E-05 2.9E-10 70.7 8.7 69 328-402 227-297 (299)
165 cd00312 Esterase_lipase Estera 98.1 5.2E-05 1.1E-09 72.2 12.9 110 79-205 93-214 (493)
166 KOG3724 Negative regulator of 98.1 5.6E-05 1.2E-09 71.5 12.4 128 56-202 62-218 (973)
167 PF10340 DUF2424: Protein of u 98.1 7.7E-05 1.7E-09 66.0 12.5 114 79-207 120-238 (374)
168 COG3150 Predicted esterase [Ge 98.1 2.5E-05 5.4E-10 59.6 7.9 90 84-205 2-92 (191)
169 COG2272 PnbA Carboxylesterase 98.0 5.5E-05 1.2E-09 68.4 10.9 135 57-205 75-218 (491)
170 PF04301 DUF452: Protein of un 98.0 9.2E-05 2E-09 60.4 11.3 78 81-205 11-91 (213)
171 PF00450 Peptidase_S10: Serine 98.0 9.9E-05 2.1E-09 68.7 13.2 137 58-206 20-183 (415)
172 KOG2237 Predicted serine prote 98.0 0.00011 2.3E-09 68.2 12.6 142 49-204 438-584 (712)
173 KOG2183 Prolylcarboxypeptidase 98.0 0.00017 3.6E-09 63.4 12.9 120 82-206 81-205 (492)
174 PF05705 DUF829: Eukaryotic pr 98.0 0.00029 6.3E-09 60.1 13.9 63 334-399 178-240 (240)
175 KOG1282 Serine carboxypeptidas 97.9 0.002 4.4E-08 59.0 19.4 64 335-401 364-447 (454)
176 PF05577 Peptidase_S28: Serine 97.9 2.8E-05 6E-10 72.6 7.5 114 81-204 29-148 (434)
177 KOG1551 Uncharacterized conser 97.9 0.00062 1.4E-08 56.2 13.9 57 337-401 309-365 (371)
178 COG1770 PtrB Protease II [Amin 97.8 0.00043 9.2E-09 64.8 13.4 136 56-204 424-562 (682)
179 PF08386 Abhydrolase_4: TAP-li 97.8 5.5E-05 1.2E-09 54.7 6.2 59 334-400 34-92 (103)
180 PF10142 PhoPQ_related: PhoPQ- 97.7 0.00031 6.7E-09 62.5 10.4 58 334-401 262-319 (367)
181 PF02450 LCAT: Lecithin:choles 97.7 4E-05 8.7E-10 70.0 4.9 83 104-204 68-160 (389)
182 COG3946 VirJ Type IV secretory 97.7 0.0011 2.4E-08 58.3 12.5 69 104-187 277-346 (456)
183 PF05576 Peptidase_S37: PS-10 97.6 0.0016 3.5E-08 57.7 12.9 108 79-203 61-169 (448)
184 PF00135 COesterase: Carboxyle 97.5 0.00034 7.3E-09 67.5 8.1 113 80-205 124-246 (535)
185 PLN02606 palmitoyl-protein thi 97.5 0.00024 5.3E-09 60.8 5.7 101 82-203 27-131 (306)
186 COG4553 DepA Poly-beta-hydroxy 97.4 0.0021 4.6E-08 54.0 10.5 71 328-402 334-407 (415)
187 PF06850 PHB_depo_C: PHB de-po 97.4 0.00023 5E-09 56.2 4.1 74 328-402 129-202 (202)
188 KOG2369 Lecithin:cholesterol a 97.3 0.00037 7.9E-09 62.7 4.7 84 104-203 127-224 (473)
189 PLN02517 phosphatidylcholine-s 97.2 0.00046 9.9E-09 64.3 5.1 90 104-203 159-262 (642)
190 PF11144 DUF2920: Protein of u 97.2 0.0013 2.8E-08 58.7 7.5 50 152-203 164-218 (403)
191 PLN02633 palmitoyl protein thi 97.2 0.00081 1.7E-08 57.7 5.8 103 81-203 25-130 (314)
192 PF02089 Palm_thioest: Palmito 97.2 0.00031 6.8E-09 59.6 3.1 104 80-203 4-115 (279)
193 PF07082 DUF1350: Protein of u 97.1 0.025 5.4E-07 47.1 13.2 101 81-201 17-122 (250)
194 COG2819 Predicted hydrolase of 96.8 0.0009 2E-08 56.1 2.9 39 167-207 137-175 (264)
195 KOG2541 Palmitoyl protein thio 96.7 0.0045 9.7E-08 51.5 6.2 98 82-202 24-126 (296)
196 KOG2182 Hydrolytic enzymes of 96.7 0.012 2.5E-07 53.7 9.2 120 79-204 84-207 (514)
197 cd00741 Lipase Lipase. Lipase 96.7 0.0013 2.8E-08 51.7 2.9 51 153-203 13-66 (153)
198 PF06259 Abhydrolase_8: Alpha/ 96.7 0.041 8.8E-07 43.9 11.1 118 79-204 17-144 (177)
199 PLN03016 sinapoylglucose-malat 96.4 0.054 1.2E-06 50.2 11.7 64 334-401 347-430 (433)
200 PF01764 Lipase_3: Lipase (cla 96.4 0.0045 9.9E-08 47.7 4.1 35 153-187 49-84 (140)
201 PLN02209 serine carboxypeptida 96.4 0.079 1.7E-06 49.2 12.6 136 59-205 49-213 (437)
202 KOG3967 Uncharacterized conser 96.3 0.0073 1.6E-07 48.3 4.9 114 79-203 99-226 (297)
203 PF11187 DUF2974: Protein of u 96.3 0.0033 7.1E-08 52.4 3.2 51 155-205 72-124 (224)
204 PF11288 DUF3089: Protein of u 96.3 0.0051 1.1E-07 50.0 3.9 100 83-188 3-116 (207)
205 COG2939 Carboxypeptidase C (ca 95.7 0.06 1.3E-06 49.5 8.2 124 79-212 99-245 (498)
206 COG2382 Fes Enterochelin ester 95.6 0.014 3.1E-07 49.8 3.9 48 157-206 162-214 (299)
207 cd00519 Lipase_3 Lipase (class 95.5 0.015 3.1E-07 49.2 3.8 51 153-203 113-167 (229)
208 PLN02454 triacylglycerol lipas 95.5 0.017 3.6E-07 52.2 4.1 36 152-187 210-248 (414)
209 KOG1516 Carboxylesterase and r 95.3 0.034 7.3E-07 53.8 6.0 114 81-207 112-235 (545)
210 COG4287 PqaA PhoPQ-activated p 95.3 0.14 3.1E-06 44.9 8.8 42 334-379 329-370 (507)
211 PLN00413 triacylglycerol lipas 95.1 0.026 5.5E-07 51.7 4.1 34 153-186 269-303 (479)
212 PLN02162 triacylglycerol lipas 94.8 0.035 7.5E-07 50.7 4.0 34 153-186 263-297 (475)
213 PLN02571 triacylglycerol lipas 94.6 0.038 8.3E-07 50.0 3.9 35 153-187 209-246 (413)
214 KOG2521 Uncharacterized conser 94.5 1 2.2E-05 40.2 12.3 64 335-401 226-289 (350)
215 PLN02408 phospholipase A1 94.5 0.044 9.6E-07 48.8 3.9 35 153-187 183-220 (365)
216 PF06441 EHN: Epoxide hydrolas 94.4 0.048 1E-06 39.8 3.3 37 56-97 72-108 (112)
217 PLN02934 triacylglycerol lipas 94.4 0.046 1E-06 50.5 3.8 34 153-186 306-340 (515)
218 PF07519 Tannase: Tannase and 94.3 0.083 1.8E-06 49.7 5.4 67 334-401 353-426 (474)
219 PF01083 Cutinase: Cutinase; 94.2 0.027 5.9E-07 45.3 1.8 52 153-204 66-122 (179)
220 PLN02310 triacylglycerol lipas 94.1 0.053 1.1E-06 49.0 3.6 34 154-187 191-229 (405)
221 PLN03037 lipase class 3 family 93.9 0.056 1.2E-06 50.1 3.4 21 167-187 318-338 (525)
222 PLN02324 triacylglycerol lipas 93.7 0.08 1.7E-06 47.9 3.9 34 153-186 198-234 (415)
223 TIGR03712 acc_sec_asp2 accesso 93.2 3.5 7.6E-05 38.2 13.4 120 56-208 270-394 (511)
224 PLN02719 triacylglycerol lipas 93.2 0.11 2.3E-06 48.3 3.9 34 153-186 278-317 (518)
225 COG2830 Uncharacterized protei 93.1 0.54 1.2E-05 36.1 6.9 78 81-203 11-89 (214)
226 PLN02802 triacylglycerol lipas 93.1 0.11 2.3E-06 48.2 3.8 35 153-187 313-350 (509)
227 PLN02753 triacylglycerol lipas 92.9 0.12 2.6E-06 48.0 3.9 34 153-186 292-331 (531)
228 PLN02761 lipase class 3 family 92.8 0.13 2.7E-06 47.9 3.8 34 153-186 273-313 (527)
229 PLN02847 triacylglycerol lipas 91.8 0.23 4.9E-06 47.0 4.2 33 154-186 237-270 (633)
230 KOG4540 Putative lipase essent 90.7 0.28 6.2E-06 41.5 3.4 36 153-188 261-297 (425)
231 COG5153 CVT17 Putative lipase 90.7 0.28 6.2E-06 41.5 3.4 36 153-188 261-297 (425)
232 KOG4569 Predicted lipase [Lipi 89.8 0.39 8.5E-06 43.1 3.8 35 153-187 156-191 (336)
233 PLN02213 sinapoylglucose-malat 89.0 1 2.3E-05 40.1 5.9 64 334-401 233-316 (319)
234 PF07519 Tannase: Tannase and 87.8 2.6 5.7E-05 39.8 8.0 95 106-206 52-152 (474)
235 PLN02213 sinapoylglucose-malat 87.3 1.4 3.1E-05 39.2 5.7 82 116-206 3-98 (319)
236 PF08237 PE-PPE: PE-PPE domain 87.1 1.6 3.5E-05 36.6 5.5 34 154-187 33-68 (225)
237 PF05277 DUF726: Protein of un 86.6 0.58 1.3E-05 41.7 2.8 38 167-204 220-260 (345)
238 PLN02209 serine carboxypeptida 85.8 1.9 4.1E-05 40.2 5.8 64 334-401 351-434 (437)
239 PLN03016 sinapoylglucose-malat 85.2 2.2 4.7E-05 39.8 5.9 135 59-204 47-210 (433)
240 COG4947 Uncharacterized protei 84.9 0.92 2E-05 35.4 2.8 47 156-204 89-136 (227)
241 KOG4372 Predicted alpha/beta h 83.4 0.82 1.8E-05 41.1 2.2 21 167-187 150-170 (405)
242 KOG2029 Uncharacterized conser 81.5 1.4 3.1E-05 41.6 3.0 31 156-186 512-545 (697)
243 PF10605 3HBOH: 3HB-oligomer h 80.9 2 4.4E-05 40.7 3.9 49 334-382 555-606 (690)
244 PF03283 PAE: Pectinacetyleste 79.0 1.9 4.1E-05 39.1 3.1 34 153-186 139-175 (361)
245 KOG1202 Animal-type fatty acid 79.0 2.5 5.5E-05 43.6 4.0 98 79-204 2121-2219(2376)
246 COG3673 Uncharacterized conser 73.8 17 0.00037 31.9 7.1 101 80-187 30-142 (423)
247 PF09994 DUF2235: Uncharacteri 70.8 15 0.00033 31.9 6.5 35 153-187 76-112 (277)
248 KOG2385 Uncharacterized conser 64.1 10 0.00023 35.4 4.1 38 167-204 447-487 (633)
249 COG4822 CbiK Cobalamin biosynt 63.1 18 0.0004 29.6 4.8 63 79-172 136-199 (265)
250 COG0529 CysC Adenylylsulfate k 62.3 7.9 0.00017 30.8 2.7 47 79-129 20-68 (197)
251 PF06309 Torsin: Torsin; Inte 62.0 6.2 0.00013 29.5 2.0 32 79-114 50-81 (127)
252 PF00698 Acyl_transf_1: Acyl t 57.4 18 0.0004 32.2 4.6 29 160-188 76-105 (318)
253 KOG1283 Serine carboxypeptidas 53.2 88 0.0019 27.7 7.6 138 57-205 9-167 (414)
254 cd07212 Pat_PNPLA9 Patatin-lik 52.0 23 0.00049 31.5 4.2 33 156-188 16-53 (312)
255 COG1073 Hydrolases of the alph 51.2 2.1 4.5E-05 37.3 -2.4 37 80-122 48-84 (299)
256 PF09419 PGP_phosphatase: Mito 49.4 46 0.001 26.4 5.1 53 110-178 36-89 (168)
257 KOG4388 Hormone-sensitive lipa 48.6 23 0.0005 33.9 3.7 41 336-379 789-829 (880)
258 PRK13256 thiopurine S-methyltr 46.2 15 0.00032 30.8 2.1 31 83-124 45-75 (226)
259 cd01714 ETF_beta The electron 46.1 52 0.0011 27.1 5.2 59 108-187 70-133 (202)
260 smart00827 PKS_AT Acyl transfe 45.6 33 0.00072 30.1 4.3 25 163-187 77-102 (298)
261 PF11713 Peptidase_C80: Peptid 45.2 13 0.00028 29.1 1.5 21 159-179 91-116 (157)
262 TIGR03131 malonate_mdcH malona 44.4 36 0.00078 29.9 4.4 26 163-188 71-97 (295)
263 PF05724 TPMT: Thiopurine S-me 44.4 16 0.00035 30.5 2.0 32 82-124 38-69 (218)
264 KOG4389 Acetylcholinesterase/B 43.7 1.4E+02 0.0029 28.4 7.7 53 153-205 198-256 (601)
265 TIGR00128 fabD malonyl CoA-acy 43.3 31 0.00068 30.1 3.8 22 167-188 83-104 (290)
266 COG5353 Uncharacterized protei 42.1 23 0.0005 27.0 2.2 10 1-10 1-10 (161)
267 PF00326 Peptidase_S9: Prolyl 41.1 43 0.00093 27.6 4.1 46 80-128 143-190 (213)
268 TIGR02816 pfaB_fam PfaB family 40.0 40 0.00086 32.6 4.1 26 163-188 260-286 (538)
269 COG0331 FabD (acyl-carrier-pro 39.4 40 0.00087 29.9 3.8 30 158-187 74-105 (310)
270 PF03205 MobB: Molybdopterin g 37.9 23 0.0005 27.1 1.8 43 83-129 1-43 (140)
271 PRK12467 peptide synthase; Pro 37.6 89 0.0019 38.9 7.2 85 81-187 3692-3777(3956)
272 cd03146 GAT1_Peptidase_E Type 36.5 81 0.0018 26.2 5.0 40 80-124 30-70 (212)
273 PF10081 Abhydrolase_9: Alpha/ 36.3 26 0.00055 30.3 2.0 38 167-204 109-147 (289)
274 TIGR01626 ytfJ_HI0045 conserve 35.3 1E+02 0.0022 24.9 5.2 53 60-121 43-101 (184)
275 cd07225 Pat_PNPLA6_PNPLA7 Pata 35.3 56 0.0012 29.0 4.0 32 156-188 32-64 (306)
276 cd07211 Pat_PNPLA8 Patatin-lik 35.0 53 0.0012 29.1 3.9 32 156-187 25-61 (308)
277 KOG1252 Cystathionine beta-syn 34.6 3.5E+02 0.0075 24.4 9.1 39 80-125 210-250 (362)
278 cd07198 Patatin Patatin-like p 34.4 80 0.0017 25.1 4.5 33 156-189 15-48 (172)
279 TIGR01361 DAHP_synth_Bsub phos 34.2 1.4E+02 0.0031 25.7 6.3 75 79-177 130-206 (260)
280 cd07207 Pat_ExoU_VipD_like Exo 34.1 71 0.0015 25.8 4.3 32 156-188 16-48 (194)
281 PF01583 APS_kinase: Adenylyls 34.0 30 0.00065 27.1 1.9 38 81-122 1-38 (156)
282 cd07230 Pat_TGL4-5_like Triacy 32.7 59 0.0013 30.4 3.9 40 156-198 90-130 (421)
283 PRK03147 thiol-disulfide oxido 32.6 69 0.0015 25.2 3.9 18 106-123 86-103 (173)
284 PRK15222 putative pilin struct 32.4 2.4E+02 0.0052 21.9 6.3 17 79-95 79-95 (156)
285 KOG1209 1-Acyl dihydroxyaceton 32.2 57 0.0012 27.0 3.2 37 80-123 5-41 (289)
286 PRK13397 3-deoxy-7-phosphohept 31.3 86 0.0019 26.8 4.3 41 79-125 120-160 (250)
287 COG4667 Predicted esterase of 30.8 79 0.0017 27.2 3.9 43 154-198 26-69 (292)
288 PF06500 DUF1100: Alpha/beta h 30.0 61 0.0013 30.0 3.4 66 334-401 189-254 (411)
289 PRK05282 (alpha)-aspartyl dipe 29.2 1.4E+02 0.003 25.3 5.2 95 81-186 31-131 (233)
290 PF01656 CbiA: CobQ/CobB/MinD/ 29.0 34 0.00073 27.6 1.6 22 104-125 17-38 (195)
291 cd07232 Pat_PLPL Patain-like p 28.9 71 0.0015 29.7 3.8 40 156-198 84-124 (407)
292 cd07210 Pat_hypo_W_succinogene 28.8 1E+02 0.0022 25.8 4.4 32 156-188 17-49 (221)
293 TIGR02764 spore_ybaN_pdaB poly 28.7 33 0.00072 27.8 1.5 35 81-121 151-188 (191)
294 PRK11613 folP dihydropteroate 28.7 1.7E+02 0.0037 25.6 5.7 53 109-181 171-225 (282)
295 cd07227 Pat_Fungal_NTE1 Fungal 28.3 92 0.002 27.0 4.1 32 156-188 27-59 (269)
296 PRK13255 thiopurine S-methyltr 28.3 48 0.001 27.7 2.4 15 109-123 54-68 (218)
297 cd07209 Pat_hypo_Ecoli_Z1214_l 27.9 1E+02 0.0023 25.6 4.3 33 156-189 15-48 (215)
298 PF13207 AAA_17: AAA domain; P 27.7 39 0.00085 24.7 1.6 37 84-128 1-40 (121)
299 PRK10081 entericidin B membran 27.6 84 0.0018 18.9 2.5 8 1-8 1-8 (48)
300 COG0218 Predicted GTPase [Gene 27.2 1E+02 0.0022 25.3 3.8 61 334-401 135-198 (200)
301 PRK10279 hypothetical protein; 26.5 89 0.0019 27.6 3.8 32 156-188 22-54 (300)
302 PRK15219 carbonic anhydrase; P 26.3 77 0.0017 27.0 3.2 32 153-184 128-160 (245)
303 PLN02633 palmitoyl protein thi 26.1 1.2E+02 0.0026 26.9 4.3 60 334-396 25-87 (314)
304 PF03853 YjeF_N: YjeF-related 26.0 48 0.001 26.3 1.9 35 79-119 23-57 (169)
305 TIGR02884 spore_pdaA delta-lac 25.5 48 0.001 27.8 1.9 35 81-121 186-221 (224)
306 PF14253 AbiH: Bacteriophage a 25.0 50 0.0011 28.5 2.0 13 167-179 235-247 (270)
307 PF02230 Abhydrolase_2: Phosph 24.8 84 0.0018 26.0 3.3 44 81-127 155-198 (216)
308 PF08257 Sulfakinin: Sulfakini 24.5 40 0.00086 12.2 0.5 6 374-379 2-7 (9)
309 PRK11460 putative hydrolase; P 24.4 1.5E+02 0.0031 25.0 4.6 45 80-127 147-193 (232)
310 cd07231 Pat_SDP1-like Sugar-De 24.4 1.1E+02 0.0023 27.3 3.8 40 156-198 85-125 (323)
311 cd03818 GT1_ExpC_like This fam 24.2 85 0.0018 28.9 3.5 38 84-129 2-39 (396)
312 PF07643 DUF1598: Protein of u 24.1 1.6E+02 0.0034 20.2 3.6 35 153-187 28-63 (84)
313 cd07228 Pat_NTE_like_bacteria 24.1 1.5E+02 0.0032 23.6 4.4 32 156-188 17-49 (175)
314 TIGR03840 TMPT_Se_Te thiopurin 23.8 63 0.0014 26.9 2.2 16 108-123 50-65 (213)
315 KOG2170 ATPase of the AAA+ sup 23.7 49 0.0011 29.0 1.6 32 79-114 107-138 (344)
316 TIGR03569 NeuB_NnaB N-acetylne 23.5 2.1E+02 0.0046 25.7 5.5 82 80-188 132-216 (329)
317 cd07205 Pat_PNPLA6_PNPLA7_NTE1 23.5 1.3E+02 0.0028 23.8 4.0 32 156-188 17-49 (175)
318 cd01983 Fer4_NifH The Fer4_Nif 23.4 59 0.0013 22.2 1.8 18 104-121 17-34 (99)
319 cd00382 beta_CA Carbonic anhyd 23.4 1E+02 0.0023 22.7 3.1 30 153-182 44-74 (119)
320 COG0400 Predicted esterase [Ge 23.1 1.7E+02 0.0038 24.2 4.7 45 79-126 144-189 (207)
321 COG1092 Predicted SAM-dependen 23.1 1.8E+02 0.0038 27.0 5.1 45 114-173 290-335 (393)
322 PF05577 Peptidase_S28: Serine 22.7 67 0.0015 30.1 2.5 38 335-380 377-414 (434)
323 PRK11586 napB nitrate reductas 22.6 99 0.0021 23.7 2.8 27 1-27 1-27 (149)
324 TIGR03709 PPK2_rel_1 polyphosp 22.5 52 0.0011 28.4 1.5 41 80-124 54-94 (264)
325 TIGR00632 vsr DNA mismatch end 22.5 1.7E+02 0.0038 21.6 4.0 15 106-120 99-113 (117)
326 cd07208 Pat_hypo_Ecoli_yjju_li 22.3 1.3E+02 0.0028 26.0 4.0 34 156-189 15-49 (266)
327 CHL00175 minD septum-site dete 21.7 81 0.0018 27.4 2.7 39 81-123 15-53 (281)
328 COG1506 DAP2 Dipeptidyl aminop 21.5 1.5E+02 0.0032 29.5 4.6 48 79-129 549-598 (620)
329 COG3727 Vsr DNA G:T-mismatch r 21.2 1.4E+02 0.0031 22.5 3.3 14 107-120 101-114 (150)
330 PHA02114 hypothetical protein 20.9 90 0.002 21.9 2.1 35 81-121 82-116 (127)
331 COG2939 Carboxypeptidase C (ca 20.8 1.1E+02 0.0023 29.1 3.2 63 334-400 425-489 (498)
332 TIGR03586 PseI pseudaminic aci 20.8 3.6E+02 0.0077 24.3 6.4 81 80-187 133-214 (327)
333 PF01012 ETF: Electron transfe 20.7 2.1E+02 0.0046 22.3 4.7 61 106-187 50-112 (164)
334 COG1752 RssA Predicted esteras 20.5 1.3E+02 0.0028 26.6 3.8 31 157-188 29-60 (306)
335 cd03028 GRX_PICOT_like Glutare 20.2 2.6E+02 0.0056 19.2 4.5 40 80-123 7-46 (90)
336 cd00883 beta_CA_cladeA Carboni 20.0 1.3E+02 0.0029 24.2 3.3 32 153-184 66-98 (182)
No 1
>PLN02872 triacylglycerol lipase
Probab=100.00 E-value=9.8e-49 Score=350.60 Aligned_cols=353 Identities=42% Similarity=0.783 Sum_probs=301.7
Q ss_pred cCCCCCCCCcceEE-EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEee
Q 041488 42 LAPAASDDGICASV-VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLA 120 (402)
Q Consensus 42 ~~~~~~~~~~~~~~-~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~ 120 (402)
.+.....+++.|++ ++|+||+.|.+++++..+.......+++|||+||+.+++..|....+.+.++..|+++||+|+++
T Consensus 34 ~~~i~~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~ 113 (395)
T PLN02872 34 AQLIHPAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVG 113 (395)
T ss_pred HHHHHHcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccc
Confidence 44456789999999 99999999999999754311122347899999999999999976655577888999999999999
Q ss_pred cCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhCCcceEEecChhHHHHHHHhcCCCc-ccccchhhc
Q 041488 121 NTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTGQKPHYVGHSLGTLIALASFSKDQP-VNKLRSAAL 199 (402)
Q Consensus 121 D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~~~v~~~v~ 199 (402)
|+||+|.|.++...++.+.++|+|++++++.+|+.++++++++..+++++++||||||.+++.++. +|. .++|+.+++
T Consensus 114 n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~~-~p~~~~~v~~~~~ 192 (395)
T PLN02872 114 NVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAALT-QPNVVEMVEAAAL 192 (395)
T ss_pred cccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHhh-ChHHHHHHHHHHH
Confidence 999999998877767777889999999999899999999998765589999999999999997664 452 247999999
Q ss_pred ccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhc
Q 041488 200 LSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFL 279 (402)
Q Consensus 200 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (402)
++|..+......+............+...++..++.|.......+...+|... ..|..++..+.|.+..++..+++.+.
T Consensus 193 l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~-~~c~~~~~~~~g~~~~~n~~~~~~~~ 271 (395)
T PLN02872 193 LCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGH-MDCNDLLTSITGTNCCFNASRIDYYL 271 (395)
T ss_pred hcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCc-hhHHHHHHHHhCCCcccchhhhhHHH
Confidence 99999887777776654443333445556888888888888888888888653 35999999999988779999999999
Q ss_pred ccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHH
Q 041488 280 EHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLES 359 (402)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~ 359 (402)
.+.|++.+.+++.||.|.++.+.|+.||++. ..|...|++..||.+++++++.++|+++++|++|.+++++.++++.+.
T Consensus 272 ~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~-~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~ 350 (395)
T PLN02872 272 EYEPHPSSVKNLRHLFQMIRKGTFAHYDYGI-FKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAE 350 (395)
T ss_pred hcCCCcchHHHHHHHHHHHhcCCcccCCCCc-hhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999997 459999999999999999996568999999999999999999999999
Q ss_pred ccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 360 LNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 360 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
+++ ..+++.+++++|.+|++..+.++++++.|++||++
T Consensus 351 Lp~----~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~ 388 (395)
T PLN02872 351 LPS----KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRS 388 (395)
T ss_pred CCC----ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHH
Confidence 987 35788899999999889999999999999999975
No 2
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=100.00 E-value=6.9e-44 Score=313.49 Aligned_cols=351 Identities=40% Similarity=0.680 Sum_probs=311.2
Q ss_pred ccCCCCCCCCcceEE-EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEe
Q 041488 41 ALAPAASDDGICASV-VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWL 119 (402)
Q Consensus 41 ~~~~~~~~~~~~~~~-~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~ 119 (402)
........+++.|++ +.|.||+.+..+++|.+. +++|+|+|.||+.+++..|....+.++++..|+++||+|+.
T Consensus 37 ~~~~i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~-----~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWL 111 (403)
T KOG2624|consen 37 TPEIIEKYGYPVEEHEVTTEDGYILTLHRIPRGK-----KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWL 111 (403)
T ss_pred HHHHHHHcCCceEEEEEEccCCeEEEEeeecCCC-----CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceee
Confidence 345567889999999 999999999999999885 77999999999999999999999999999999999999999
Q ss_pred ecCCCCcccCCCCCCCCC-CcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcc-cccch
Q 041488 120 ANTRGTKYSRGHVSLSPD-DSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPV-NKLRS 196 (402)
Q Consensus 120 ~D~rG~G~S~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~-~~v~~ 196 (402)
-+.||.-.|.++...++. ..+||+||+++++.+|+.++|+++++..+ ++++.+|||.|+......++.+|.. ++|+.
T Consensus 112 gN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~ 191 (403)
T KOG2624|consen 112 GNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKS 191 (403)
T ss_pred ecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhhe
Confidence 999999999999999996 77899999999999999999999999999 9999999999999999988887644 38999
Q ss_pred hhcccccccccCCchhHHHHhhhhh--HHHHHHHhcCCCCCCchHHHHHHHHHhhcCC---CCchhhhhhhhcCCC-CCC
Q 041488 197 AALLSPIAYVGQMTSPLAKNAADNF--LAEALYWLGLDEFDPRGEAVVKLLKNICQKP---GVDCTNLLNSFTGQN-CCL 270 (402)
Q Consensus 197 ~v~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~ 270 (402)
+++++|++++.-...+......... ...+...++..++.|...+.+.+...+|... ...|..++..+.|++ ..+
T Consensus 192 ~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~ 271 (403)
T KOG2624|consen 192 FIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNW 271 (403)
T ss_pred eeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhh
Confidence 9999999977644444444333221 1246677888999999999999999999843 457999999999988 788
Q ss_pred CccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCCh
Q 041488 271 NSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDV 350 (402)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~ 350 (402)
+..+...++.+.|++.+.+++.||.|..+++.++.||++.. +|...|++..||.+++.++ ++|+.+++|+.|.++.+
T Consensus 272 n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~-~N~~~Y~q~~pP~Y~l~~i--~~P~~l~~g~~D~l~~~ 348 (403)
T KOG2624|consen 272 NTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSK-RNLKHYGQSTPPEYDLTNI--KVPTALYYGDNDWLADP 348 (403)
T ss_pred hhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCcc-ccHhhcCCCCCCCCCcccc--ccCEEEEecCCcccCCH
Confidence 88888999999999999999999999999999999999996 8999999999999999999 89999999999999999
Q ss_pred hHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 351 NDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
+++..+...+++... ...+.+++..|++|++..+.++++++.|++.+++
T Consensus 349 ~DV~~~~~~~~~~~~--~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~ 397 (403)
T KOG2624|consen 349 EDVLILLLVLPNSVI--KYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRL 397 (403)
T ss_pred HHHHHHHHhcccccc--cccccCCCccceeeeeccCcHHHHHHHHHHHHHh
Confidence 999999888887211 2233489999999999999999999999999874
No 3
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=7.3e-31 Score=229.68 Aligned_cols=269 Identities=13% Similarity=0.136 Sum_probs=166.1
Q ss_pred EEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCC
Q 041488 55 VVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSL 134 (402)
Q Consensus 55 ~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~ 134 (402)
++...||..+.++.+.+.. ..++.|+++||+++++..| ..++..|++.||+|+++|+||||.|++...
T Consensus 4 ~~~~~~g~~l~~~~~~~~~-----~~~~~v~llHG~~~~~~~~------~~~~~~l~~~g~~via~D~~G~G~S~~~~~- 71 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT-----YPKALVFISHGAGEHSGRY------EELAENISSLGILVFSHDHIGHGRSNGEKM- 71 (276)
T ss_pred eeecCCCCEEEEEeccCCC-----CCCEEEEEeCCCccccchH------HHHHHHHHhCCCEEEEccCCCCCCCCCccC-
Confidence 3667899999999886542 4467788889999999998 778999988999999999999999975321
Q ss_pred CCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhH
Q 041488 135 SPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPL 213 (402)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~ 213 (402)
+ ..++.++. .|+...++.+.+..+ .+++++||||||++++.++.++| ++|+++|+++|....... ..
T Consensus 72 ~-------~~~~~~~~-~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p--~~i~~lil~~p~~~~~~~--~~ 139 (276)
T PHA02857 72 M-------IDDFGVYV-RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNP--NLFTAMILMSPLVNAEAV--PR 139 (276)
T ss_pred C-------cCCHHHHH-HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCc--cccceEEEeccccccccc--cH
Confidence 1 11444443 367777777766666 68999999999999999999987 899999999996542211 11
Q ss_pred HHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHH
Q 041488 214 AKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIH 293 (402)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (402)
....... .............. .... .... ......... + .+... ..........
T Consensus 140 ~~~~~~~----~~~~~~~~~~~~~~-~~~~----~~~~----~~~~~~~~~--~---------~~~~~--~~~~~~~~~~ 193 (276)
T PHA02857 140 LNLLAAK----LMGIFYPNKIVGKL-CPES----VSRD----MDEVYKYQY--D---------PLVNH--EKIKAGFASQ 193 (276)
T ss_pred HHHHHHH----HHHHhCCCCccCCC-CHhh----ccCC----HHHHHHHhc--C---------CCccC--CCccHHHHHH
Confidence 1100000 00101000000000 0000 0000 000000000 0 00000 0000000000
Q ss_pred HHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEEC
Q 041488 294 VAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYR 373 (402)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (402)
..... ... ...+.++ ++|+|+++|++|.++|++.++++.+.+.. +++++++
T Consensus 194 ~~~~~--------------~~~---------~~~l~~i--~~Pvliv~G~~D~i~~~~~~~~l~~~~~~----~~~~~~~ 244 (276)
T PHA02857 194 VLKAT--------------NKV---------RKIIPKI--KTPILILQGTNNEISDVSGAYYFMQHANC----NREIKIY 244 (276)
T ss_pred HHHHH--------------HHH---------HHhcccC--CCCEEEEecCCCCcCChHHHHHHHHHccC----CceEEEe
Confidence 00000 000 0126677 89999999999999999999999998854 3899999
Q ss_pred CCCCccceecccCcchhccHHHHHHHhcC
Q 041488 374 QDYAHADYVMGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 374 ~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 402 (402)
+++||.......+..+++++.|.+||+++
T Consensus 245 ~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 245 EGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999953322344788999999999863
No 4
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=8e-30 Score=229.87 Aligned_cols=272 Identities=16% Similarity=0.224 Sum_probs=164.9
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
+.+.||..+.+..+.+.+ ...+++|||+||++++...|. ..++..|+++||+|+++|+||||.|++....
T Consensus 66 ~~~~~g~~l~~~~~~p~~----~~~~~~iv~lHG~~~~~~~~~-----~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~- 135 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPEN----SRPKAAVCFCHGYGDTCTFFF-----EGIARKIASSGYGVFAMDYPGFGLSEGLHGY- 135 (349)
T ss_pred EEcCCCCEEEEEEEecCC----CCCCeEEEEECCCCCccchHH-----HHHHHHHHhCCCEEEEecCCCCCCCCCCCCC-
Confidence 778999999999986542 135789999999998876431 5677888888999999999999999863211
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHH--hC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchh
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQ--TG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSP 212 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~--~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~ 212 (402)
..++++++. |+.+.++.+... +. .+++|+||||||++++.++.++| ++|+++|+++|.........+
T Consensus 136 -------~~~~~~~~~-dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p--~~v~glVLi~p~~~~~~~~~~ 205 (349)
T PLN02385 136 -------IPSFDDLVD-DVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQP--NAWDGAILVAPMCKIADDVVP 205 (349)
T ss_pred -------cCCHHHHHH-HHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCc--chhhheeEecccccccccccC
Confidence 126676644 777777776543 23 58999999999999999999988 999999999986542211100
Q ss_pred HHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcc-cCCCcchHHHH
Q 041488 213 LAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLE-HEPQATSTKNM 291 (402)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 291 (402)
... .......+..........+...+...+.. .. ... ....+.. ...........
T Consensus 206 ~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~---~~~---------------~~~~~~~~~~~~~~~~~~~ 261 (349)
T PLN02385 206 PPL--VLQILILLANLLPKAKLVPQKDLAELAFR----DL---KKR---------------KMAEYNVIAYKDKPRLRTA 261 (349)
T ss_pred chH--HHHHHHHHHHHCCCceecCCCcccccccc----CH---HHH---------------HHhhcCcceeCCCcchHHH
Confidence 000 00000111111111101111000000000 00 000 0000000 00000000000
Q ss_pred HHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEE
Q 041488 292 IHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQ 371 (402)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~ 371 (402)
. ..+... .. ....+.++ ++|+|+|+|++|.++|++.++.+++.++. .+.+++
T Consensus 262 ~---~~l~~~-----------~~---------~~~~l~~i--~~P~Lii~G~~D~vv~~~~~~~l~~~~~~---~~~~l~ 313 (349)
T PLN02385 262 V---ELLRTT-----------QE---------IEMQLEEV--SLPLLILHGEADKVTDPSVSKFLYEKASS---SDKKLK 313 (349)
T ss_pred H---HHHHHH-----------HH---------HHHhcccC--CCCEEEEEeCCCCccChHHHHHHHHHcCC---CCceEE
Confidence 0 000000 00 00125677 89999999999999999999999998854 237899
Q ss_pred ECCCCCccceecccCcchh----ccHHHHHHHhcC
Q 041488 372 YRQDYAHADYVMGENAGQV----LYEPLMAFFKLQ 402 (402)
Q Consensus 372 ~~~~~gH~~~~~~~~~~~~----~~~~i~~fl~~~ 402 (402)
++|++||.. ..+.|++ +++.|++||+++
T Consensus 314 ~i~~~gH~l---~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 314 LYEDAYHSI---LEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred EeCCCeeec---ccCCChhhHHHHHHHHHHHHHHh
Confidence 999999993 4566665 889999999864
No 5
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=2.5e-30 Score=212.77 Aligned_cols=274 Identities=19% Similarity=0.234 Sum_probs=181.6
Q ss_pred ceEEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCcccccc-ccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCC
Q 041488 52 CASVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAV-TWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRG 130 (402)
Q Consensus 52 ~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~-~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~ 130 (402)
.+.++.+.+|..+.+..|.+.. ....+..|+++||++.... .+ +.++..|+..||.|+++|++|||.|++
T Consensus 28 ~~~~~~n~rG~~lft~~W~p~~---~~~pr~lv~~~HG~g~~~s~~~------~~~a~~l~~~g~~v~a~D~~GhG~SdG 98 (313)
T KOG1455|consen 28 SESFFTNPRGAKLFTQSWLPLS---GTEPRGLVFLCHGYGEHSSWRY------QSTAKRLAKSGFAVYAIDYEGHGRSDG 98 (313)
T ss_pred eeeeEEcCCCCEeEEEecccCC---CCCCceEEEEEcCCcccchhhH------HHHHHHHHhCCCeEEEeeccCCCcCCC
Confidence 3444899999999999997642 2255778999999999873 33 679999999999999999999999997
Q ss_pred CCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccccccc
Q 041488 131 HVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVG 207 (402)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~ 207 (402)
....-+ +++.. .+|+...++.++.+.. .+.+|+||||||++++.++.++| +..+++|+++|..-..
T Consensus 99 l~~yi~--------~~d~~-v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p--~~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 99 LHAYVP--------SFDLV-VDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDP--NFWDGAILVAPMCKIS 167 (313)
T ss_pred CcccCC--------cHHHH-HHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCC--cccccceeeecccccC
Confidence 554433 45555 3478888887666543 68999999999999999999988 9999999999976433
Q ss_pred CCc--hhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCC--
Q 041488 208 QMT--SPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEP-- 283 (402)
Q Consensus 208 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 283 (402)
... .+....+ ...+....+.....|........ ..+.......+.+|
T Consensus 168 ~~~kp~p~v~~~----l~~l~~liP~wk~vp~~d~~~~~-------------------------~kdp~~r~~~~~npl~ 218 (313)
T KOG1455|consen 168 EDTKPHPPVISI----LTLLSKLIPTWKIVPTKDIIDVA-------------------------FKDPEKRKILRSDPLC 218 (313)
T ss_pred CccCCCcHHHHH----HHHHHHhCCceeecCCccccccc-------------------------cCCHHHHHHhhcCCce
Confidence 322 1111111 11111222222222221110000 00001111111111
Q ss_pred --CcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHcc
Q 041488 284 --QATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLN 361 (402)
Q Consensus 284 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~ 361 (402)
.....++.....+... . ...++.++ ++|.+|+||++|.++.|+.++.+++..+
T Consensus 219 y~g~pRl~T~~ElLr~~~--------------~---------le~~l~~v--tvPflilHG~dD~VTDp~~Sk~Lye~A~ 273 (313)
T KOG1455|consen 219 YTGKPRLKTAYELLRVTA--------------D---------LEKNLNEV--TVPFLILHGTDDKVTDPKVSKELYEKAS 273 (313)
T ss_pred ecCCccHHHHHHHHHHHH--------------H---------HHHhcccc--cccEEEEecCCCcccCcHHHHHHHHhcc
Confidence 1112222222211100 0 01126677 8999999999999999999999999988
Q ss_pred CCCCCceEEEECCCCCcccee-cccCcchhccHHHHHHHhcC
Q 041488 362 DHEGDKLVVQYRQDYAHADYV-MGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 362 ~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~i~~fl~~~ 402 (402)
. .++++.+|||.-|.-+. ..++..+.++..|++||+++
T Consensus 274 S---~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 274 S---SDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred C---CCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 8 46899999999997311 35677889999999999864
No 6
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=1.1e-29 Score=226.84 Aligned_cols=134 Identities=22% Similarity=0.217 Sum_probs=107.1
Q ss_pred EEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC
Q 041488 54 SVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS 133 (402)
Q Consensus 54 ~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~ 133 (402)
..+...||..++++.++.. ..+++||++||++.+...| ..++..|+++||+|+++|+||||.|++...
T Consensus 33 ~~~~~~~g~~l~~~~~~~~------~~~~~vll~HG~~~~~~~y------~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~ 100 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAP------HHDRVVVICPGRIESYVKY------AELAYDLFHLGYDVLIIDHRGQGRSGRLLD 100 (330)
T ss_pred eEEEcCCCCEEEEEEccCC------CCCcEEEEECCccchHHHH------HHHHHHHHHCCCeEEEEcCCCCCCCCCCCC
Confidence 3477889999999988654 2367899999999988777 678888889999999999999999975322
Q ss_pred CCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 134 LSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
... .....+++++.. |+.++++.+.+..+ .+++++||||||.+++.++.++| ++|+++|+++|...
T Consensus 101 ~~~---~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p--~~v~~lvl~~p~~~ 167 (330)
T PRK10749 101 DPH---RGHVERFNDYVD-DLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHP--GVFDAIALCAPMFG 167 (330)
T ss_pred CCC---cCccccHHHHHH-HHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCC--CCcceEEEECchhc
Confidence 111 011236777755 88888888766666 79999999999999999999988 99999999998753
No 7
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=1.6e-29 Score=223.24 Aligned_cols=278 Identities=14% Similarity=0.137 Sum_probs=159.8
Q ss_pred cCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCC
Q 041488 58 TKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPD 137 (402)
Q Consensus 58 ~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~ 137 (402)
+.+|..++|...+.+ +++|||+||+++++..| ..++..|.+ .|+|+++|+||||.|+.......
T Consensus 14 ~~~~~~i~y~~~G~~--------~~~vlllHG~~~~~~~w------~~~~~~L~~-~~~vi~~DlpG~G~S~~~~~~~~- 77 (294)
T PLN02824 14 RWKGYNIRYQRAGTS--------GPALVLVHGFGGNADHW------RKNTPVLAK-SHRVYAIDLLGYGYSDKPNPRSA- 77 (294)
T ss_pred EEcCeEEEEEEcCCC--------CCeEEEECCCCCChhHH------HHHHHHHHh-CCeEEEEcCCCCCCCCCCccccc-
Confidence 447888888775422 47999999999999999 678888865 47999999999999986321100
Q ss_pred CcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCch--hHH
Q 041488 138 DSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTS--PLA 214 (402)
Q Consensus 138 ~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~--~~~ 214 (402)
+.-..|++++++. |+.++ ++.++ ++++++||||||.+++.++.++| ++|+++|++++......... ...
T Consensus 78 -~~~~~~~~~~~a~-~l~~~----l~~l~~~~~~lvGhS~Gg~va~~~a~~~p--~~v~~lili~~~~~~~~~~~~~~~~ 149 (294)
T PLN02824 78 -PPNSFYTFETWGE-QLNDF----CSDVVGDPAFVICNSVGGVVGLQAAVDAP--ELVRGVMLINISLRGLHIKKQPWLG 149 (294)
T ss_pred -cccccCCHHHHHH-HHHHH----HHHhcCCCeEEEEeCHHHHHHHHHHHhCh--hheeEEEEECCCcccccccccchhh
Confidence 0001346776654 44444 44445 79999999999999999999988 99999999998642211110 000
Q ss_pred HHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHH
Q 041488 215 KNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHV 294 (402)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (402)
... ...+...+... ...+.+...... ......++....+.+...+......+........ ....+
T Consensus 150 ~~~----~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 214 (294)
T PLN02824 150 RPF----IKAFQNLLRET------AVGKAFFKSVAT--PETVKNILCQCYHDDSAVTDELVEAILRPGLEPG---AVDVF 214 (294)
T ss_pred hHH----HHHHHHHHhch------hHHHHHHHhhcC--HHHHHHHHHHhccChhhccHHHHHHHHhccCCch---HHHHH
Confidence 000 00010100000 000000000000 0000001110011111111111111111000000 00001
Q ss_pred HHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECC
Q 041488 295 AQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQ 374 (402)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (402)
...... . +.. .....+.++ ++|+|+|+|++|.++|.+.++.+.+.+++ .++++++
T Consensus 215 ~~~~~~---~--~~~-------------~~~~~l~~i--~~P~lvi~G~~D~~~~~~~~~~~~~~~~~-----~~~~~i~ 269 (294)
T PLN02824 215 LDFISY---S--GGP-------------LPEELLPAV--KCPVLIAWGEKDPWEPVELGRAYANFDAV-----EDFIVLP 269 (294)
T ss_pred HHHhcc---c--ccc-------------chHHHHhhc--CCCeEEEEecCCCCCChHHHHHHHhcCCc-----cceEEeC
Confidence 111100 0 000 001126677 89999999999999999999888777765 7899999
Q ss_pred CCCccceecccCcchhccHHHHHHHhcC
Q 041488 375 DYAHADYVMGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 375 ~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 402 (402)
++||+ .+.++|+++.+.|.+|++++
T Consensus 270 ~~gH~---~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 270 GVGHC---PQDEAPELVNPLIESFVARH 294 (294)
T ss_pred CCCCC---hhhhCHHHHHHHHHHHHhcC
Confidence 99999 46799999999999999875
No 8
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.97 E-value=4.1e-29 Score=218.39 Aligned_cols=258 Identities=12% Similarity=0.078 Sum_probs=156.2
Q ss_pred EcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCC
Q 041488 57 TTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSP 136 (402)
Q Consensus 57 ~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~ 136 (402)
...+|.+++|+....+ ..+++|||+||++++...| ..+...|. .+|+|+++|+||||.|+....
T Consensus 7 ~~~~~~~~~~~~~~~~------~~~~plvllHG~~~~~~~w------~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~--- 70 (276)
T TIGR02240 7 IDLDGQSIRTAVRPGK------EGLTPLLIFNGIGANLELV------FPFIEALD-PDLEVIAFDVPGVGGSSTPRH--- 70 (276)
T ss_pred eccCCcEEEEEEecCC------CCCCcEEEEeCCCcchHHH------HHHHHHhc-cCceEEEECCCCCCCCCCCCC---
Confidence 3457888988776432 2357999999999999999 66777774 579999999999999975321
Q ss_pred CCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHH
Q 041488 137 DDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAK 215 (402)
Q Consensus 137 ~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~ 215 (402)
.+++++++. | ++.+++.++ ++++|+||||||.+++.+|.++| ++|+++|++++.............
T Consensus 71 ------~~~~~~~~~-~----~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~ 137 (276)
T TIGR02240 71 ------PYRFPGLAK-L----AARMLDYLDYGQVNAIGVSWGGALAQQFAHDYP--ERCKKLILAATAAGAVMVPGKPKV 137 (276)
T ss_pred ------cCcHHHHHH-H----HHHHHHHhCcCceEEEEECHHHHHHHHHHHHCH--HHhhheEEeccCCccccCCCchhH
Confidence 235666643 3 444555566 79999999999999999999988 999999999987642111110000
Q ss_pred HhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHH
Q 041488 216 NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVA 295 (402)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (402)
. ... ........ ... .. .. .... + +.....+......+..............
T Consensus 138 ~-~~~--~~~~~~~~-~~~-~~-~~----~~~~-----------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 189 (276)
T TIGR02240 138 L-MMM--ASPRRYIQ-PSH-GI-HI----APDI-----------Y----GGAFRRDPELAMAHASKVRSGGKLGYYW--- 189 (276)
T ss_pred H-HHh--cCchhhhc-ccc-cc-ch----hhhh-----------c----cceeeccchhhhhhhhhcccCCCchHHH---
Confidence 0 000 00000000 000 00 00 0000 0 0000000000000000000000000000
Q ss_pred HHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCC
Q 041488 296 QMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQD 375 (402)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (402)
+.... .+ ......+.++ ++|+|+|+|++|+++|++.++++.+.+++ .+++++++
T Consensus 190 ~~~~~-----~~--------------~~~~~~l~~i--~~P~lii~G~~D~~v~~~~~~~l~~~~~~-----~~~~~i~~ 243 (276)
T TIGR02240 190 QLFAG-----LG--------------WTSIHWLHKI--QQPTLVLAGDDDPIIPLINMRLLAWRIPN-----AELHIIDD 243 (276)
T ss_pred HHHHH-----cC--------------CchhhHhhcC--CCCEEEEEeCCCCcCCHHHHHHHHHhCCC-----CEEEEEcC
Confidence 00000 00 0001126678 89999999999999999999999999998 78888875
Q ss_pred CCccceecccCcchhccHHHHHHHhc
Q 041488 376 YAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 376 ~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
||+ .+.+.|+++++.|.+|+++
T Consensus 244 -gH~---~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 244 -GHL---FLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred -CCc---hhhccHHHHHHHHHHHHHH
Confidence 999 4678999999999999975
No 9
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=2.2e-28 Score=219.30 Aligned_cols=275 Identities=16% Similarity=0.230 Sum_probs=163.1
Q ss_pred EEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCC
Q 041488 55 VVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSL 134 (402)
Q Consensus 55 ~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~ 134 (402)
.+.+.||..++++.+.... ....+++|||+||++.+. .|.. ..++..|+++||+|+++|+||||.|.+....
T Consensus 36 ~~~~~dg~~l~~~~~~~~~---~~~~~~~VvllHG~~~~~-~~~~----~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~ 107 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSS---SSPPRALIFMVHGYGNDI-SWTF----QSTAIFLAQMGFACFALDLEGHGRSEGLRAY 107 (330)
T ss_pred eEEcCCCCEEEEEEEecCC---CCCCceEEEEEcCCCCCc-ceeh----hHHHHHHHhCCCEEEEecCCCCCCCCCcccc
Confidence 4888999999998885442 113467799999998665 3422 5567788889999999999999999753221
Q ss_pred CCCCcccccccHHHHhhcchHHHHHHHHHHh--C-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCch
Q 041488 135 SPDDSAFWDWTWDELVAYDLPATLQHVHDQT--G-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTS 211 (402)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~--~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~ 211 (402)
..+++++. +|+.++++++.... . .+++|+||||||.+++.++.++| ++|+++|+++|.........
T Consensus 108 --------~~~~~~~~-~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~ 176 (330)
T PLN02298 108 --------VPNVDLVV-EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANP--EGFDGAVLVAPMCKISDKIR 176 (330)
T ss_pred --------CCCHHHHH-HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCc--ccceeEEEecccccCCcccC
Confidence 12566664 48999999987642 2 57999999999999999999988 89999999998754322100
Q ss_pred hHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHH
Q 041488 212 PLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNM 291 (402)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (402)
+... .......+..........+....... ....... ..+...+ ...+.. . ......
T Consensus 177 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~---~~~~~~~-------~~~~~~-~---~~~~~~ 233 (330)
T PLN02298 177 PPWP--IPQILTFVARFLPTLAIVPTADLLEK-------SVKVPAK---KIIAKRN-------PMRYNG-K---PRLGTV 233 (330)
T ss_pred CchH--HHHHHHHHHHHCCCCccccCCCcccc-------cccCHHH---HHHHHhC-------ccccCC-C---ccHHHH
Confidence 0000 00000001111110000000000000 0000000 0000000 000000 0 000000
Q ss_pred HHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEE
Q 041488 292 IHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQ 371 (402)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~ 371 (402)
........ .. ...+.++ ++|+|+++|++|.++|++.++.+++.++. ..++++
T Consensus 234 ~~~~~~~~-----------------~~------~~~l~~i--~~PvLii~G~~D~ivp~~~~~~l~~~i~~---~~~~l~ 285 (330)
T PLN02298 234 VELLRVTD-----------------YL------GKKLKDV--SIPFIVLHGSADVVTDPDVSRALYEEAKS---EDKTIK 285 (330)
T ss_pred HHHHHHHH-----------------HH------HHhhhhc--CCCEEEEecCCCCCCCHHHHHHHHHHhcc---CCceEE
Confidence 00000000 00 0125677 89999999999999999999999998864 237999
Q ss_pred ECCCCCccceecccCcc----hhccHHHHHHHhcC
Q 041488 372 YRQDYAHADYVMGENAG----QVLYEPLMAFFKLQ 402 (402)
Q Consensus 372 ~~~~~gH~~~~~~~~~~----~~~~~~i~~fl~~~ 402 (402)
++++++|.. ..+.| +++.+.|.+||.++
T Consensus 286 ~~~~a~H~~---~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 286 IYDGMMHSL---LFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred EcCCcEeee---ecCCCHHHHHHHHHHHHHHHHHh
Confidence 999999993 33444 56888999999753
No 10
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.96 E-value=5.4e-29 Score=216.23 Aligned_cols=278 Identities=23% Similarity=0.287 Sum_probs=177.9
Q ss_pred ceEEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccC-C
Q 041488 52 CASVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSR-G 130 (402)
Q Consensus 52 ~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~-~ 130 (402)
.+..+.+.||..+.++.+...+ ..+.+||++||++.+...| ..++..|..+||.|+++|+||||.|. +
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~-----~~~g~Vvl~HG~~Eh~~ry------~~la~~l~~~G~~V~~~D~RGhG~S~r~ 78 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPE-----PPKGVVVLVHGLGEHSGRY------EELADDLAARGFDVYALDLRGHGRSPRG 78 (298)
T ss_pred ccceeecCCCceEEEEeecCCC-----CCCcEEEEecCchHHHHHH------HHHHHHHHhCCCEEEEecCCCCCCCCCC
Confidence 3455889999999999998774 3348999999999999998 77999999999999999999999997 3
Q ss_pred CCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCC
Q 041488 131 HVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQM 209 (402)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~ 209 (402)
..... . ++.++. .|+.++++.+..... .+++++||||||.+++.++.+++ .+|+++|+.+|......
T Consensus 79 ~rg~~-~-------~f~~~~-~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~--~~i~~~vLssP~~~l~~- 146 (298)
T COG2267 79 QRGHV-D-------SFADYV-DDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP--PRIDGLVLSSPALGLGG- 146 (298)
T ss_pred CcCCc-h-------hHHHHH-HHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC--ccccEEEEECccccCCh-
Confidence 32221 1 466664 489999998887645 89999999999999999999987 99999999999875443
Q ss_pred chhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCC-cchH
Q 041488 210 TSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQ-ATST 288 (402)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 288 (402)
.......... .......+.|..... . +...........-+....+.+.. .|. ....
T Consensus 147 -~~~~~~~~~~------~~~~~~~~~p~~~~~--------------~-~~~~~~~~~~~sr~~~~~~~~~~-dP~~~~~~ 203 (298)
T COG2267 147 -AILRLILARL------ALKLLGRIRPKLPVD--------------S-NLLEGVLTDDLSRDPAEVAAYEA-DPLIGVGG 203 (298)
T ss_pred -hHHHHHHHHH------hcccccccccccccC--------------c-ccccCcCcchhhcCHHHHHHHhc-CCccccCC
Confidence 0000000000 000001111100000 0 00000000000111111222222 221 1111
Q ss_pred HHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCC-hhHHHHHHHHccCCCCCc
Q 041488 289 KNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSD-VNDVKLLLESLNDHEGDK 367 (402)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~-~~~~~~~~~~~~~~~~~~ 367 (402)
....++........ . +...+..++ ++|+|+++|++|.+++ .+...++++.... .+
T Consensus 204 ~~~~w~~~~~~a~~--~-----------------~~~~~~~~~--~~PvLll~g~~D~vv~~~~~~~~~~~~~~~---~~ 259 (298)
T COG2267 204 PVSRWVDLALLAGR--V-----------------PALRDAPAI--ALPVLLLQGGDDRVVDNVEGLARFFERAGS---PD 259 (298)
T ss_pred ccHHHHHHHHHhhc--c-----------------cchhccccc--cCCEEEEecCCCccccCcHHHHHHHHhcCC---CC
Confidence 11111111111111 0 001113345 7999999999999999 7888888888776 34
Q ss_pred eEEEECCCCCccceecccCcc--hhccHHHHHHHhc
Q 041488 368 LVVQYRQDYAHADYVMGENAG--QVLYEPLMAFFKL 401 (402)
Q Consensus 368 ~~~~~~~~~gH~~~~~~~~~~--~~~~~~i~~fl~~ 401 (402)
+++++++++.|.. +.+... +++++.+.+|+.+
T Consensus 260 ~~~~~~~g~~He~--~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 260 KELKVIPGAYHEL--LNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred ceEEecCCcchhh--hcCcchHHHHHHHHHHHHHHh
Confidence 7899999999993 455555 9999999999975
No 11
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=5.6e-29 Score=219.81 Aligned_cols=117 Identities=19% Similarity=0.246 Sum_probs=93.7
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
..+.+|.+++|...+ .+++|||+||++++...| +.++..|++. |+|+++|+||||.|+.+..
T Consensus 11 ~~~~~g~~i~y~~~G---------~g~~vvllHG~~~~~~~w------~~~~~~L~~~-~~via~D~~G~G~S~~~~~-- 72 (295)
T PRK03592 11 RVEVLGSRMAYIETG---------EGDPIVFLHGNPTSSYLW------RNIIPHLAGL-GRCLAPDLIGMGASDKPDI-- 72 (295)
T ss_pred EEEECCEEEEEEEeC---------CCCEEEEECCCCCCHHHH------HHHHHHHhhC-CEEEEEcCCCCCCCCCCCC--
Confidence 345588888887764 257999999999999999 6788888766 5999999999999986321
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
.|++++++. |+.+ +.+.++ ++++++||||||.+++.++.++| ++|+++|++++..
T Consensus 73 -------~~~~~~~a~-dl~~----ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lil~~~~~ 128 (295)
T PRK03592 73 -------DYTFADHAR-YLDA----WFDALGLDDVVLVGHDWGSALGFDWAARHP--DRVRGIAFMEAIV 128 (295)
T ss_pred -------CCCHHHHHH-HHHH----HHHHhCCCCeEEEEECHHHHHHHHHHHhCh--hheeEEEEECCCC
Confidence 246666654 4444 445556 79999999999999999999988 9999999999854
No 12
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=2.1e-28 Score=216.73 Aligned_cols=104 Identities=19% Similarity=0.194 Sum_probs=84.4
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQ 159 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~ 159 (402)
.+++|||+||++++...| ..++..|.+.||+|+++|+||||.|++.... ..|++++++. | +.
T Consensus 45 ~~~~lvliHG~~~~~~~w------~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~-------~~~~~~~~a~-~----l~ 106 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLY------RKMIPILAAAGHRVIAPDLIGFGRSDKPTRR-------EDYTYARHVE-W----MR 106 (302)
T ss_pred CCCEEEEECCCCCchhhH------HHHHHHHHhCCCEEEEECCCCCCCCCCCCCc-------ccCCHHHHHH-H----HH
Confidence 367999999999999999 6788889778999999999999999753211 1346666543 3 44
Q ss_pred HHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 160 HVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 160 ~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
.+.++++ ++++++||||||.+++.++.++| ++|+++|++++.
T Consensus 107 ~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~ 149 (302)
T PRK00870 107 SWFEQLDLTDVTLVCQDWGGLIGLRLAAEHP--DRFARLVVANTG 149 (302)
T ss_pred HHHHHcCCCCEEEEEEChHHHHHHHHHHhCh--hheeEEEEeCCC
Confidence 4455567 79999999999999999999988 999999999874
No 13
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=1.7e-27 Score=215.03 Aligned_cols=267 Identities=16% Similarity=0.138 Sum_probs=166.3
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
+...+|..+.++.|.+.. ...+++|||+||++++...| ..++..|+++||+|+++|+||||.|++....
T Consensus 115 ~~~~~~~~l~~~~~~p~~----~~~~~~Vl~lHG~~~~~~~~------~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~- 183 (395)
T PLN02652 115 FYGARRNALFCRSWAPAA----GEMRGILIIIHGLNEHSGRY------LHFAKQLTSCGFGVYAMDWIGHGGSDGLHGY- 183 (395)
T ss_pred EECCCCCEEEEEEecCCC----CCCceEEEEECCchHHHHHH------HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC-
Confidence 677888888888875531 13467999999999998887 6789999999999999999999999863221
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCc-ccccchhhcccccccccCCchhH
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQP-VNKLRSAALLSPIAYVGQMTSPL 213 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~-~~~v~~~v~~~p~~~~~~~~~~~ 213 (402)
..+++.+. +|+.++++++....+ .+++++||||||.+++.++. +|. +++|+++|+.+|....... .+.
T Consensus 184 -------~~~~~~~~-~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~-~~~ 253 (395)
T PLN02652 184 -------VPSLDYVV-EDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA-HPI 253 (395)
T ss_pred -------CcCHHHHH-HHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc-hHH
Confidence 12555554 489999999987766 68999999999999998775 342 2589999999987543221 111
Q ss_pred HHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCC---CcchHHH
Q 041488 214 AKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEP---QATSTKN 290 (402)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 290 (402)
...... . .........+..... .... . ..+............ .......
T Consensus 254 ~~~~~~-l---~~~~~p~~~~~~~~~---------~~~~--~-------------s~~~~~~~~~~~dp~~~~g~i~~~~ 305 (395)
T PLN02652 254 VGAVAP-I---FSLVAPRFQFKGANK---------RGIP--V-------------SRDPAALLAKYSDPLVYTGPIRVRT 305 (395)
T ss_pred HHHHHH-H---HHHhCCCCcccCccc---------ccCC--c-------------CCCHHHHHHHhcCCCcccCCchHHH
Confidence 111000 0 000000000000000 0000 0 000000000000000 0000000
Q ss_pred HHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEE
Q 041488 291 MIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVV 370 (402)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~ 370 (402)
........ ... ...+.+| ++|+|++||++|.++|++.++++++.+.+ ...++
T Consensus 306 ~~~~~~~~-----------------~~l------~~~L~~I--~vPvLIi~G~~D~vvp~~~a~~l~~~~~~---~~k~l 357 (395)
T PLN02652 306 GHEILRIS-----------------SYL------TRNFKSV--TVPFMVLHGTADRVTDPLASQDLYNEAAS---RHKDI 357 (395)
T ss_pred HHHHHHHH-----------------HHH------HhhcccC--CCCEEEEEeCCCCCCCHHHHHHHHHhcCC---CCceE
Confidence 00000000 000 0126677 89999999999999999999999998765 24788
Q ss_pred EECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 371 QYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 371 ~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
+++|+++|.. +.++.++++++.|.+||++
T Consensus 358 ~~~~ga~H~l--~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 358 KLYDGFLHDL--LFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred EEECCCeEEe--ccCCCHHHHHHHHHHHHHH
Confidence 9999999993 4455799999999999975
No 14
>PRK06489 hypothetical protein; Provisional
Probab=99.96 E-value=3.3e-27 Score=213.49 Aligned_cols=135 Identities=18% Similarity=0.166 Sum_probs=91.6
Q ss_pred cCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHH-------HhCCCcEEeecCCCCcccCC
Q 041488 58 TKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLL-------ADNGYDVWLANTRGTKYSRG 130 (402)
Q Consensus 58 ~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l-------~~~g~~v~~~D~rG~G~S~~ 130 (402)
+.+|..++|...+.+........+++|||+||++++...|.. ..+...| ..++|+|+++|+||||.|+.
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~----~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~ 121 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLS----PTFAGELFGPGQPLDASKYFIILPDGIGHGKSSK 121 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhcc----chhHHHhcCCCCcccccCCEEEEeCCCCCCCCCC
Confidence 356788888766532100001126799999999999888831 1344333 24689999999999999985
Q ss_pred CCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-Ccce-EEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 131 HVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPH-YVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~-lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
+.... ...+..|++++++. .+++.+.++++ ++++ ++||||||++++.++.++| ++|+++|++++..
T Consensus 122 p~~~~--~~~~~~~~~~~~a~----~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P--~~V~~LVLi~s~~ 189 (360)
T PRK06489 122 PSDGL--RAAFPRYDYDDMVE----AQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYP--DFMDALMPMASQP 189 (360)
T ss_pred CCcCC--CCCCCcccHHHHHH----HHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCc--hhhheeeeeccCc
Confidence 32110 00112346665543 23344556677 7875 8999999999999999988 9999999998754
No 15
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.96 E-value=5.1e-28 Score=202.66 Aligned_cols=289 Identities=18% Similarity=0.208 Sum_probs=167.5
Q ss_pred EEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC
Q 041488 54 SVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS 133 (402)
Q Consensus 54 ~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~ 133 (402)
..+.+.+|.++++..-+. +.+|.|+++||++.++.+| +.....|+..||+|+++|+||+|.|+.+..
T Consensus 24 hk~~~~~gI~~h~~e~g~-------~~gP~illlHGfPe~wysw------r~q~~~la~~~~rviA~DlrGyG~Sd~P~~ 90 (322)
T KOG4178|consen 24 HKFVTYKGIRLHYVEGGP-------GDGPIVLLLHGFPESWYSW------RHQIPGLASRGYRVIAPDLRGYGFSDAPPH 90 (322)
T ss_pred eeeEEEccEEEEEEeecC-------CCCCEEEEEccCCccchhh------hhhhhhhhhcceEEEecCCCCCCCCCCCCC
Confidence 337777886655555433 4589999999999999999 777888999999999999999999997543
Q ss_pred CCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchh
Q 041488 134 LSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSP 212 (402)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~ 212 (402)
.. .||++.++. .+..+++.++ ++++++||+||+++++.++..+| ++|+++|+++.... .....+
T Consensus 91 ~~-------~Yt~~~l~~-----di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~P--erv~~lv~~nv~~~-~p~~~~ 155 (322)
T KOG4178|consen 91 IS-------EYTIDELVG-----DIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYP--ERVDGLVTLNVPFP-NPKLKP 155 (322)
T ss_pred cc-------eeeHHHHHH-----HHHHHHHHhccceeEEEeccchhHHHHHHHHhCh--hhcceEEEecCCCC-Ccccch
Confidence 22 457776654 3556666777 89999999999999999999988 99999999877654 111111
Q ss_pred HHHHhhhhhHHHHHHHhcCCCCCCchHHH----HHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchH
Q 041488 213 LAKNAADNFLAEALYWLGLDEFDPRGEAV----VKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATST 288 (402)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (402)
.... ...+.........+....+...+. +.+......+ -.+....... .....+.-...
T Consensus 156 ~~~~-~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~-----------~~~~~~~~~~-----~~~~~~~w~t~ 218 (322)
T KOG4178|consen 156 LDSS-KAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTR-----------KTPGPLIVPK-----QPNENPLWLTE 218 (322)
T ss_pred hhhh-ccccCccceeEeccccCcchhhhccchhHHhHHhhhcc-----------ccCCccccCC-----CCCCccchhhH
Confidence 1111 011111111110111111111000 0000000000 0000000000 00000000001
Q ss_pred HHHHHHHHHHhcCcee-eecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChh-HHHHHHHHccCCCCC
Q 041488 289 KNMIHVAQMIREGTIA-MYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVN-DVKLLLESLNDHEGD 366 (402)
Q Consensus 289 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~-~~~~~~~~~~~~~~~ 366 (402)
..+..+........+. ..++.. |+...-+ .....+.++ ++|+++++|+.|.+.+.. ....+.+.++.
T Consensus 219 edi~~~~~~f~~~g~~gplNyyr---n~~r~w~--a~~~~~~~i--~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~---- 287 (322)
T KOG4178|consen 219 EDIAFYVSKFQIDGFTGPLNYYR---NFRRNWE--AAPWALAKI--TIPVLFIWGDLDPVLPYPIFGELYRKDVPR---- 287 (322)
T ss_pred HHHHHHHhccccccccccchhhH---HHhhCch--hcccccccc--ccceEEEEecCcccccchhHHHHHHHhhcc----
Confidence 1111111111111121 122111 1111110 112236678 899999999999988765 45555666666
Q ss_pred ceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 367 KLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 367 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
..+.++++++||+ .+.|.|+++++.|+.|+++
T Consensus 288 l~~~vv~~~~gH~---vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 288 LTERVVIEGIGHF---VQQEKPQEVNQAILGFINS 319 (322)
T ss_pred ccceEEecCCccc---ccccCHHHHHHHHHHHHHh
Confidence 3478899999999 5899999999999999975
No 16
>PLN02578 hydrolase
Probab=99.95 E-value=3.8e-27 Score=212.45 Aligned_cols=268 Identities=15% Similarity=0.196 Sum_probs=153.3
Q ss_pred cCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCC
Q 041488 58 TKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPD 137 (402)
Q Consensus 58 ~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~ 137 (402)
+.+|..++|...+ ++++|||+||++++...| ..+...|+ ++|+|+++|+||||.|++...
T Consensus 72 ~~~~~~i~Y~~~g---------~g~~vvliHG~~~~~~~w------~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~---- 131 (354)
T PLN02578 72 TWRGHKIHYVVQG---------EGLPIVLIHGFGASAFHW------RYNIPELA-KKYKVYALDLLGFGWSDKALI---- 131 (354)
T ss_pred EECCEEEEEEEcC---------CCCeEEEECCCCCCHHHH------HHHHHHHh-cCCEEEEECCCCCCCCCCccc----
Confidence 4457778776532 257899999999999888 55667774 579999999999999986321
Q ss_pred CcccccccHHHHhhcchHHHHHHHHHHhCCcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHH--
Q 041488 138 DSAFWDWTWDELVAYDLPATLQHVHDQTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAK-- 215 (402)
Q Consensus 138 ~~~~~~~~~~~~~~~d~~~~v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~-- 215 (402)
.|+.++++. |+.++++.+. .++++++||||||.+++.+|.++| ++|+++|++++.+...........
T Consensus 132 -----~~~~~~~a~-~l~~~i~~~~---~~~~~lvG~S~Gg~ia~~~A~~~p--~~v~~lvLv~~~~~~~~~~~~~~~~~ 200 (354)
T PLN02578 132 -----EYDAMVWRD-QVADFVKEVV---KEPAVLVGNSLGGFTALSTAVGYP--ELVAGVALLNSAGQFGSESREKEEAI 200 (354)
T ss_pred -----ccCHHHHHH-HHHHHHHHhc---cCCeEEEEECHHHHHHHHHHHhCh--HhcceEEEECCCcccccccccccccc
Confidence 345665543 4444444332 269999999999999999999988 999999999876543221110000
Q ss_pred -----HhhhhhHHHHHHHhcC------CCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCC
Q 041488 216 -----NAADNFLAEALYWLGL------DEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQ 284 (402)
Q Consensus 216 -----~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (402)
................ ..........+....... ......+....+.+......
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~ 265 (354)
T PLN02578 201 VVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVY---------------KDKSNVDDYLVESITEPAAD 265 (354)
T ss_pred ccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhc---------------CCcccCCHHHHHHHHhcccC
Confidence 0000000000000000 000000000011110000 00000110001111000000
Q ss_pred cchHHHHHHHH-HHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCC
Q 041488 285 ATSTKNMIHVA-QMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDH 363 (402)
Q Consensus 285 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~ 363 (402)
......+.... ..... ...++ ....+.++ ++|+++|+|++|.++|++.++.+.+.+++
T Consensus 266 ~~~~~~~~~~~~~~~~~--~~~~~----------------~~~~l~~i--~~PvLiI~G~~D~~v~~~~~~~l~~~~p~- 324 (354)
T PLN02578 266 PNAGEVYYRLMSRFLFN--QSRYT----------------LDSLLSKL--SCPLLLLWGDLDPWVGPAKAEKIKAFYPD- 324 (354)
T ss_pred CchHHHHHHHHHHHhcC--CCCCC----------------HHHHhhcC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCC-
Confidence 00001111000 00000 00000 01125677 89999999999999999999999999988
Q ss_pred CCCceEEEECCCCCccceecccCcchhccHHHHHHHh
Q 041488 364 EGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 400 (402)
Q Consensus 364 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~ 400 (402)
.+++++ ++||+ .+.+.|+++.+.|.+|++
T Consensus 325 ----a~l~~i-~~GH~---~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 325 ----TTLVNL-QAGHC---PHDEVPEQVNKALLEWLS 353 (354)
T ss_pred ----CEEEEe-CCCCC---ccccCHHHHHHHHHHHHh
Confidence 788888 59999 478999999999999996
No 17
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.95 E-value=3.2e-27 Score=207.53 Aligned_cols=251 Identities=15% Similarity=0.175 Sum_probs=143.3
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQH 160 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~ 160 (402)
+++|||+||++++...|... ......|.+.||+|+++|+||||.|+..... . ..+. +..+.+..
T Consensus 30 ~~~ivllHG~~~~~~~~~~~---~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~-~------~~~~------~~~~~l~~ 93 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNY---YRNIGPFVDAGYRVILKDSPGFNKSDAVVMD-E------QRGL------VNARAVKG 93 (282)
T ss_pred CCeEEEECCCCCchhhHHHH---HHHHHHHHhCCCEEEEECCCCCCCCCCCcCc-c------cccc------hhHHHHHH
Confidence 57899999999888777220 1223456678999999999999999753210 0 0011 12233455
Q ss_pred HHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchH
Q 041488 161 VHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGE 239 (402)
Q Consensus 161 l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 239 (402)
+++.++ ++++++||||||.+++.++.++| ++|+++|+++|.............. .......... .+...
T Consensus 94 ~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~ 163 (282)
T TIGR03343 94 LMDALDIEKAHLVGNSMGGATALNFALEYP--DRIGKLILMGPGGLGPSLFAPMPME----GIKLLFKLYA----EPSYE 163 (282)
T ss_pred HHHHcCCCCeeEEEECchHHHHHHHHHhCh--HhhceEEEECCCCCCccccccCchH----HHHHHHHHhc----CCCHH
Confidence 566678 89999999999999999999988 9999999998863211100000000 0000000000 00001
Q ss_pred HHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccC
Q 041488 240 AVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYG 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (402)
....+......... ..+........... .. .......+............
T Consensus 164 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~------------- 213 (282)
T TIGR03343 164 TLKQMLNVFLFDQS---------------LITEELLQGRWENI-QR-QPEHLKNFLISSQKAPLSTW------------- 213 (282)
T ss_pred HHHHHHhhCccCcc---------------cCcHHHHHhHHHHh-hc-CHHHHHHHHHhccccccccc-------------
Confidence 11111110000000 00000000000000 00 00000000000000000000
Q ss_pred CCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHH
Q 041488 320 QPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFF 399 (402)
Q Consensus 320 ~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl 399 (402)
.....++++ ++|+|+++|++|.+++++.++++++.+++ .++++++++||+ ...+.|+++.+.|.+||
T Consensus 214 ---~~~~~l~~i--~~Pvlli~G~~D~~v~~~~~~~~~~~~~~-----~~~~~i~~agH~---~~~e~p~~~~~~i~~fl 280 (282)
T TIGR03343 214 ---DVTARLGEI--KAKTLVTWGRDDRFVPLDHGLKLLWNMPD-----AQLHVFSRCGHW---AQWEHADAFNRLVIDFL 280 (282)
T ss_pred ---hHHHHHhhC--CCCEEEEEccCCCcCCchhHHHHHHhCCC-----CEEEEeCCCCcC---CcccCHHHHHHHHHHHh
Confidence 001126677 89999999999999999999999999998 899999999999 47799999999999999
Q ss_pred h
Q 041488 400 K 400 (402)
Q Consensus 400 ~ 400 (402)
+
T Consensus 281 ~ 281 (282)
T TIGR03343 281 R 281 (282)
T ss_pred h
Confidence 6
No 18
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=2.8e-27 Score=213.46 Aligned_cols=120 Identities=18% Similarity=0.256 Sum_probs=89.5
Q ss_pred CCc-EEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCC
Q 041488 60 DGY-ILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDD 138 (402)
Q Consensus 60 dG~-~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~ 138 (402)
+|. +++|...+.+. ....+++|||+||++++...| ..++..|. .+|+|+++|+||||.|++...
T Consensus 69 ~g~~~i~Y~~~G~g~---~~~~gp~lvllHG~~~~~~~w------~~~~~~L~-~~~~via~Dl~G~G~S~~~~~----- 133 (360)
T PLN02679 69 KGEYSINYLVKGSPE---VTSSGPPVLLVHGFGASIPHW------RRNIGVLA-KNYTVYAIDLLGFGASDKPPG----- 133 (360)
T ss_pred CCceeEEEEEecCcc---cCCCCCeEEEECCCCCCHHHH------HHHHHHHh-cCCEEEEECCCCCCCCCCCCC-----
Confidence 455 78877665431 112458999999999999999 66777785 589999999999999975321
Q ss_pred cccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcC-CCcccccchhhcccccc
Q 041488 139 SAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSK-DQPVNKLRSAALLSPIA 204 (402)
Q Consensus 139 ~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~-~p~~~~v~~~v~~~p~~ 204 (402)
..|++++++. |+.+ +.+.++ ++++++||||||.+++.++.. +| ++|+++|++++..
T Consensus 134 ---~~~~~~~~a~-~l~~----~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P--~rV~~LVLi~~~~ 191 (360)
T PLN02679 134 ---FSYTMETWAE-LILD----FLEEVVQKPTVLIGNSVGSLACVIAASESTR--DLVRGLVLLNCAG 191 (360)
T ss_pred ---ccccHHHHHH-HHHH----HHHHhcCCCeEEEEECHHHHHHHHHHHhcCh--hhcCEEEEECCcc
Confidence 1346666543 3333 344556 799999999999999988874 57 9999999999864
No 19
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=3e-27 Score=206.98 Aligned_cols=125 Identities=14% Similarity=0.125 Sum_probs=95.7
Q ss_pred CCcceEEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCccc
Q 041488 49 DGICASVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYS 128 (402)
Q Consensus 49 ~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S 128 (402)
.++.++.+...+|.+++|...+ .+++|||+||++.+...| +.+...| .++|+|+++|+||||.|
T Consensus 11 ~~~~~~~~~~~~~~~i~y~~~G---------~~~~iv~lHG~~~~~~~~------~~~~~~l-~~~~~vi~~D~~G~G~S 74 (286)
T PRK03204 11 LYPFESRWFDSSRGRIHYIDEG---------TGPPILLCHGNPTWSFLY------RDIIVAL-RDRFRCVAPDYLGFGLS 74 (286)
T ss_pred cccccceEEEcCCcEEEEEECC---------CCCEEEEECCCCccHHHH------HHHHHHH-hCCcEEEEECCCCCCCC
Confidence 4445555555578888876542 257899999999888888 5677777 46799999999999999
Q ss_pred CCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 129 RGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
++.... .++++ +.++.+..++++++ ++++++||||||.+++.++..+| ++|+++|++++..
T Consensus 75 ~~~~~~--------~~~~~-----~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p--~~v~~lvl~~~~~ 136 (286)
T PRK03204 75 ERPSGF--------GYQID-----EHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERA--DRVRGVVLGNTWF 136 (286)
T ss_pred CCCCcc--------ccCHH-----HHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhCh--hheeEEEEECccc
Confidence 753210 12444 44455677777778 89999999999999999999988 9999999987753
No 20
>PLN02965 Probable pheophorbidase
Probab=99.95 E-value=2.9e-27 Score=204.09 Aligned_cols=241 Identities=17% Similarity=0.177 Sum_probs=145.4
Q ss_pred cEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHH
Q 041488 83 PVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVH 162 (402)
Q Consensus 83 ~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~ 162 (402)
+|||+||++.+...| +.++..|.+.||+|+++|+||||.|+.... ..+++++++. |+.+++
T Consensus 5 ~vvllHG~~~~~~~w------~~~~~~L~~~~~~via~Dl~G~G~S~~~~~--------~~~~~~~~a~-dl~~~l---- 65 (255)
T PLN02965 5 HFVFVHGASHGAWCW------YKLATLLDAAGFKSTCVDLTGAGISLTDSN--------TVSSSDQYNR-PLFALL---- 65 (255)
T ss_pred EEEEECCCCCCcCcH------HHHHHHHhhCCceEEEecCCcCCCCCCCcc--------ccCCHHHHHH-HHHHHH----
Confidence 599999999999999 678888878899999999999999975321 0236666654 444444
Q ss_pred HHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCc-hhHHH-HhhhhhHHHHHHHh-cCCCCCCc
Q 041488 163 DQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMT-SPLAK-NAADNFLAEALYWL-GLDEFDPR 237 (402)
Q Consensus 163 ~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~-~~~~~-~~~~~~~~~~~~~~-~~~~~~p~ 237 (402)
+.++ ++++++||||||.+++.++.++| ++|+++|++++........ ..... ..... ....... ......+.
T Consensus 66 ~~l~~~~~~~lvGhSmGG~ia~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 141 (255)
T PLN02965 66 SDLPPDHKVILVGHSIGGGSVTEALCKFT--DKISMAIYVAAAMVKPGSIISPRLKNVMEGT--EKIWDYTFGEGPDKPP 141 (255)
T ss_pred HhcCCCCCEEEEecCcchHHHHHHHHhCc--hheeEEEEEccccCCCCCCccHHHHhhhhcc--ccceeeeeccCCCCCc
Confidence 4454 49999999999999999999988 9999999998853211110 00000 00000 0000000 00000000
Q ss_pred hH-HH-HHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhh
Q 041488 238 GE-AV-VKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENK 315 (402)
Q Consensus 238 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (402)
.. .. ..+.... +....+ ................... . ..
T Consensus 142 ~~~~~~~~~~~~~-----------------------------~~~~~~----~~~~~~~~~~~~~~~~~~~--~----~~ 182 (255)
T PLN02965 142 TGIMMKPEFVRHY-----------------------------YYNQSP----LEDYTLSSKLLRPAPVRAF--Q----DL 182 (255)
T ss_pred chhhcCHHHHHHH-----------------------------HhcCCC----HHHHHHHHHhcCCCCCcch--h----hh
Confidence 00 00 0000000 000000 0000000000000000000 0 00
Q ss_pred cccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHH
Q 041488 316 KHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPL 395 (402)
Q Consensus 316 ~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i 395 (402)
. .....+.++ ++|+++|+|++|.++|+..++.+.+.+++ .++++++++||++ +.+.|+++.+.|
T Consensus 183 ~------~~~~~~~~i--~vP~lvi~g~~D~~~~~~~~~~~~~~~~~-----a~~~~i~~~GH~~---~~e~p~~v~~~l 246 (255)
T PLN02965 183 D------KLPPNPEAE--KVPRVYIKTAKDNLFDPVRQDVMVENWPP-----AQTYVLEDSDHSA---FFSVPTTLFQYL 246 (255)
T ss_pred h------hccchhhcC--CCCEEEEEcCCCCCCCHHHHHHHHHhCCc-----ceEEEecCCCCch---hhcCHHHHHHHH
Confidence 0 001124466 89999999999999999999999999998 8899999999994 679999999999
Q ss_pred HHHHhc
Q 041488 396 MAFFKL 401 (402)
Q Consensus 396 ~~fl~~ 401 (402)
.+|++.
T Consensus 247 ~~~~~~ 252 (255)
T PLN02965 247 LQAVSS 252 (255)
T ss_pred HHHHHH
Confidence 999874
No 21
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.95 E-value=6.6e-27 Score=213.56 Aligned_cols=285 Identities=17% Similarity=0.160 Sum_probs=160.0
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHH---hCCCcEEeecCCCCcccCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLA---DNGYDVWLANTRGTKYSRGHV 132 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~---~~g~~v~~~D~rG~G~S~~~~ 132 (402)
+.+.+|..++++..++.. ...+++|||+||++++...|.. .+...|. +.+|+|+++|+||||.|+++.
T Consensus 180 ~~~~~~~~l~~~~~gp~~----~~~k~~VVLlHG~~~s~~~W~~-----~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~ 250 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKD----NKAKEDVLFIHGFISSSAFWTE-----TLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA 250 (481)
T ss_pred eEeeCCeEEEEEEecCCC----CCCCCeEEEECCCCccHHHHHH-----HHHHHHHHHhhCCCEEEEECCCCCCCCcCCC
Confidence 455667888888876542 1336899999999999998832 2334443 479999999999999997532
Q ss_pred CCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCch
Q 041488 133 SLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTS 211 (402)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~ 211 (402)
. ..|+++++.. |+ ...+.+.++ ++++++||||||.+++.++.++| ++|+++|+++|.........
T Consensus 251 ~--------~~ytl~~~a~-~l---~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~P--e~V~~LVLi~~~~~~~~~~~ 316 (481)
T PLN03087 251 D--------SLYTLREHLE-MI---ERSVLERYKVKSFHIVAHSLGCILALALAVKHP--GAVKSLTLLAPPYYPVPKGV 316 (481)
T ss_pred C--------CcCCHHHHHH-HH---HHHHHHHcCCCCEEEEEECHHHHHHHHHHHhCh--HhccEEEEECCCccccccch
Confidence 1 1246666543 22 135666778 89999999999999999999988 99999999998654322111
Q ss_pred hHHHHhhhhhHHHHHHHhcCCCCCCc---hHHHHHHHHHhhcCC-------CCchhhhhhhhcCCCCCCCccccchhccc
Q 041488 212 PLAKNAADNFLAEALYWLGLDEFDPR---GEAVVKLLKNICQKP-------GVDCTNLLNSFTGQNCCLNSSIVDVFLEH 281 (402)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (402)
..... ...........+. ......+........ ...+..+...+. .. .........+..+
T Consensus 317 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~l~~~~~~~ 386 (481)
T PLN03087 317 QATQY--------VMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLT-RN-RMRTFLIEGFFCH 386 (481)
T ss_pred hHHHH--------HHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhh-hh-hhhHHHHHHHHhc
Confidence 00000 0000000000000 011111111000000 000000000000 00 0000000000000
Q ss_pred CCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHcc
Q 041488 282 EPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLN 361 (402)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~ 361 (402)
.. . ..+............ ..+ ..... .+.+| ++|+|+|+|++|.++|++.++.+++.++
T Consensus 387 ~~-~---~~~~~l~~~i~~~~~-~l~-----~~l~~---------l~~~I--~vPtLII~Ge~D~ivP~~~~~~la~~iP 445 (481)
T PLN03087 387 TH-N---AAWHTLHNIICGSGS-KLD-----GYLDH---------VRDQL--KCDVAIFHGGDDELIPVECSYAVKAKVP 445 (481)
T ss_pred cc-h---hhHHHHHHHHhchhh-hhh-----hHHHH---------HHHhC--CCCEEEEEECCCCCCCHHHHHHHHHhCC
Confidence 00 0 000000000000000 000 00000 02256 7999999999999999999999999999
Q ss_pred CCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 362 DHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 362 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
+ +++++++++||.++ ..+.|+++++.|.+|.+.
T Consensus 446 ~-----a~l~vI~~aGH~~~--v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 446 R-----ARVKVIDDKDHITI--VVGRQKEFARELEEIWRR 478 (481)
T ss_pred C-----CEEEEeCCCCCcch--hhcCHHHHHHHHHHHhhc
Confidence 8 89999999999963 237899999999999864
No 22
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=2.4e-26 Score=192.99 Aligned_cols=282 Identities=17% Similarity=0.159 Sum_probs=160.7
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
+...++..+......... ..+.++||+||++.+...|..++ ..|++ .++|+++|++|+|+|+++....
T Consensus 70 v~i~~~~~iw~~~~~~~~-----~~~~plVliHGyGAg~g~f~~Nf------~~La~-~~~vyaiDllG~G~SSRP~F~~ 137 (365)
T KOG4409|consen 70 VRIPNGIEIWTITVSNES-----ANKTPLVLIHGYGAGLGLFFRNF------DDLAK-IRNVYAIDLLGFGRSSRPKFSI 137 (365)
T ss_pred eecCCCceeEEEeecccc-----cCCCcEEEEeccchhHHHHHHhh------hhhhh-cCceEEecccCCCCCCCCCCCC
Confidence 444455555444443332 56889999999999999995533 24543 8999999999999999865422
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCC-chhH
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQM-TSPL 213 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~-~~~~ 213 (402)
.. +.. .....+.++.-+...+ ++++|+|||+||+++..||.++| ++|+.+||++|.+..... ..+.
T Consensus 138 d~---------~~~-e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyP--erV~kLiLvsP~Gf~~~~~~~~~ 205 (365)
T KOG4409|consen 138 DP---------TTA-EKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYP--ERVEKLILVSPWGFPEKPDSEPE 205 (365)
T ss_pred Cc---------ccc-hHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhCh--HhhceEEEecccccccCCCcchh
Confidence 11 001 1123345666677778 89999999999999999999988 999999999999876644 2111
Q ss_pred H-HHhhhhh------HHHHHHHhcCCCCCC-chHHHHHHHHHhhcCCCC-chhh-hhhhhcCCCCCCCccccchhcccCC
Q 041488 214 A-KNAADNF------LAEALYWLGLDEFDP-RGEAVVKLLKNICQKPGV-DCTN-LLNSFTGQNCCLNSSIVDVFLEHEP 283 (402)
Q Consensus 214 ~-~~~~~~~------~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (402)
. .....+. .....++...+...| ...++.++.......... ..++ +..+..+.+ ...|
T Consensus 206 ~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n------------~~~p 273 (365)
T KOG4409|consen 206 FTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCN------------AQNP 273 (365)
T ss_pred hcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhc------------CCCC
Confidence 1 1111111 000000000011111 112222222222211110 0011 111111111 0011
Q ss_pred CcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCC
Q 041488 284 QATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDH 363 (402)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~ 363 (402)
.++ ..+ ..+.....+..- |-...+..++.++|+++|+|+.| +++...+.++.+.+..
T Consensus 274 sgE--~~f---k~l~~~~g~Ar~----------------Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~~- 330 (365)
T KOG4409|consen 274 SGE--TAF---KNLFEPGGWARR----------------PMIQRLRELKKDVPVTFIYGDRD-WMDKNAGLEVTKSLMK- 330 (365)
T ss_pred cHH--HHH---HHHHhccchhhh----------------hHHHHHHhhccCCCEEEEecCcc-cccchhHHHHHHHhhc-
Confidence 111 111 111111111100 00011223322599999999999 4577888888887654
Q ss_pred CCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 364 EGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 364 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
..++.+++|++||. ...+.|+.|++.|+.++++
T Consensus 331 --~~~~~~~v~~aGHh---vylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 331 --EYVEIIIVPGAGHH---VYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred --ccceEEEecCCCce---eecCCHHHHHHHHHHHHhc
Confidence 35899999999999 4579999999999999875
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.95 E-value=2.1e-26 Score=202.03 Aligned_cols=267 Identities=16% Similarity=0.203 Sum_probs=156.3
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
+.+.+|.++++...+.. .+++|||+||++++...| ..+...|+ ++|+|+++|+||||.|+....
T Consensus 10 ~~~~~~~~~~~~~~g~~-------~~~~vv~~hG~~~~~~~~------~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-- 73 (278)
T TIGR03056 10 RVTVGPFHWHVQDMGPT-------AGPLLLLLHGTGASTHSW------RDLMPPLA-RSFRVVAPDLPGHGFTRAPFR-- 73 (278)
T ss_pred eeeECCEEEEEEecCCC-------CCCeEEEEcCCCCCHHHH------HHHHHHHh-hCcEEEeecCCCCCCCCCccc--
Confidence 34558888888776543 267999999999999998 66777784 579999999999999975322
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCch-hH
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTS-PL 213 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~-~~ 213 (402)
..+++++++. | +..+++.++ ++++++||||||.+++.++.++| ++++++|++++......... ..
T Consensus 74 ------~~~~~~~~~~-~----l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~~v~~~~~~~~~~~~~~~~ 140 (278)
T TIGR03056 74 ------FRFTLPSMAE-D----LSALCAAEGLSPDGVIGHSAGAAIALRLALDGP--VTPRMVVGINAALMPFEGMAGTL 140 (278)
T ss_pred ------cCCCHHHHHH-H----HHHHHHHcCCCCceEEEECccHHHHHHHHHhCC--cccceEEEEcCcccccccccccc
Confidence 1236666544 3 444445566 78999999999999999999987 89999999887543211000 00
Q ss_pred HHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHH
Q 041488 214 AKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIH 293 (402)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (402)
...... .+......+ .+........ .....+.. ......+......+............
T Consensus 141 ~~~~~~--------~~~~~~~~~------~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--- 199 (278)
T TIGR03056 141 FPYMAR--------VLACNPFTP------PMMSRGAADQ-QRVERLIR---DTGSLLDKAGMTYYGRLIRSPAHVDG--- 199 (278)
T ss_pred cchhhH--------hhhhcccch------HHHHhhcccC-cchhHHhh---ccccccccchhhHHHHhhcCchhhhH---
Confidence 000000 000000000 0000000000 00000000 00000000000000000000000000
Q ss_pred HHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEEC
Q 041488 294 VAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYR 373 (402)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (402)
..... ..++.. +....++++ ++|+++|+|++|.++|++.++.+.+.+++ .+++++
T Consensus 200 ~~~~~-----~~~~~~-------------~~~~~~~~i--~~P~lii~g~~D~~vp~~~~~~~~~~~~~-----~~~~~~ 254 (278)
T TIGR03056 200 ALSMM-----AQWDLA-------------PLNRDLPRI--TIPLHLIAGEEDKAVPPDESKRAATRVPT-----ATLHVV 254 (278)
T ss_pred HHHHh-----hccccc-------------chhhhcccC--CCCEEEEEeCCCcccCHHHHHHHHHhccC-----CeEEEE
Confidence 00000 000000 001126677 79999999999999999999999999888 889999
Q ss_pred CCCCccceecccCcchhccHHHHHHHh
Q 041488 374 QDYAHADYVMGENAGQVLYEPLMAFFK 400 (402)
Q Consensus 374 ~~~gH~~~~~~~~~~~~~~~~i~~fl~ 400 (402)
+++||+ +..+.|+++.+.|.+|++
T Consensus 255 ~~~gH~---~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 255 PGGGHL---VHEEQADGVVGLILQAAE 278 (278)
T ss_pred CCCCCc---ccccCHHHHHHHHHHHhC
Confidence 999999 356889999999999985
No 24
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.95 E-value=8.5e-27 Score=182.39 Aligned_cols=229 Identities=16% Similarity=0.205 Sum_probs=158.9
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQH 160 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~ 160 (402)
+..|||+||+.++.... +.++++|.++||.|++|.+||||.... .+...+.+++-. |+.+..++
T Consensus 15 ~~AVLllHGFTGt~~Dv------r~Lgr~L~e~GyTv~aP~ypGHG~~~e---------~fl~t~~~DW~~-~v~d~Y~~ 78 (243)
T COG1647 15 NRAVLLLHGFTGTPRDV------RMLGRYLNENGYTVYAPRYPGHGTLPE---------DFLKTTPRDWWE-DVEDGYRD 78 (243)
T ss_pred CEEEEEEeccCCCcHHH------HHHHHHHHHCCceEecCCCCCCCCCHH---------HHhcCCHHHHHH-HHHHHHHH
Confidence 47899999999999987 889999999999999999999997642 344457777744 78888888
Q ss_pred HHHHhCCcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHH
Q 041488 161 VHDQTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEA 240 (402)
Q Consensus 161 l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 240 (402)
+.++.-+.|.++|.||||.+++.+|...| ++++|.+|+.................. +..... . .+....
T Consensus 79 L~~~gy~eI~v~GlSmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie~~l~y~--~~~kk~---e--~k~~e~ 147 (243)
T COG1647 79 LKEAGYDEIAVVGLSMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIEGLLEYF--RNAKKY---E--GKDQEQ 147 (243)
T ss_pred HHHcCCCeEEEEeecchhHHHHHHHhhCC----ccceeeecCCcccccchhhhHHHHHHH--HHhhhc---c--CCCHHH
Confidence 77553389999999999999999998864 789999888765444332222211110 000000 0 011111
Q ss_pred HHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCC
Q 041488 241 VVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQ 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (402)
.++-+..... .+ ..+...+.++.....
T Consensus 148 ~~~e~~~~~~-------------------------------~~-~~~~~~~~~~i~~~~--------------------- 174 (243)
T COG1647 148 IDKEMKSYKD-------------------------------TP-MTTTAQLKKLIKDAR--------------------- 174 (243)
T ss_pred HHHHHHHhhc-------------------------------ch-HHHHHHHHHHHHHHH---------------------
Confidence 1111110000 00 011122222221111
Q ss_pred CCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHh
Q 041488 321 PNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 400 (402)
Q Consensus 321 ~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~ 400 (402)
.+++.| ..|+++++|++|+++|.+.+..++++... .+.++.++++.||. +..+...+++.+.|+.||+
T Consensus 175 -----~~~~~I--~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s---~~KeL~~~e~SgHV--It~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 175 -----RSLDKI--YSPTLVVQGRQDEMVPAESANFIYDHVES---DDKELKWLEGSGHV--ITLDKERDQVEEDVITFLE 242 (243)
T ss_pred -----hhhhhc--ccchhheecccCCCCCHHHHHHHHHhccC---CcceeEEEccCCce--eecchhHHHHHHHHHHHhh
Confidence 126788 89999999999999999999999999877 57899999999998 7788899999999999997
Q ss_pred c
Q 041488 401 L 401 (402)
Q Consensus 401 ~ 401 (402)
.
T Consensus 243 ~ 243 (243)
T COG1647 243 K 243 (243)
T ss_pred C
Confidence 4
No 25
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.95 E-value=3.8e-26 Score=197.85 Aligned_cols=246 Identities=19% Similarity=0.230 Sum_probs=144.9
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
..+++|||+||+++++..| ..++..| .++|+|+++|+||||.|..... ..+++++++. |+.+
T Consensus 11 ~~~~~iv~lhG~~~~~~~~------~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~--------~~~~~~~~~~-~~~~-- 72 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYW------APQLDVL-TQRFHVVTYDHRGTGRSPGELP--------PGYSIAHMAD-DVLQ-- 72 (257)
T ss_pred CCCCEEEEEcCCCcchhHH------HHHHHHH-HhccEEEEEcCCCCCCCCCCCc--------ccCCHHHHHH-HHHH--
Confidence 3478999999999999988 5566667 4689999999999999975321 1235655543 3333
Q ss_pred HHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCc
Q 041488 159 QHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPR 237 (402)
Q Consensus 159 ~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 237 (402)
+.+..+ ++++++||||||.+++.++.++| ++|+++|++++.......... ..... ...........
T Consensus 73 --~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~--~~v~~~i~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~---- 139 (257)
T TIGR03611 73 --LLDALNIERFHFVGHALGGLIGLQLALRYP--ERLLSLVLINAWSRPDPHTRR----CFDVR-IALLQHAGPEA---- 139 (257)
T ss_pred --HHHHhCCCcEEEEEechhHHHHHHHHHHCh--HHhHHheeecCCCCCChhHHH----HHHHH-HHHHhccCcch----
Confidence 344556 78999999999999999999987 899999999875432211100 00000 00000000000
Q ss_pred hHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcc
Q 041488 238 GEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKH 317 (402)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (402)
+......... ... +................. ... .. ......+ ... ..++.
T Consensus 140 --~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~-~~~-----~~~~~--------- 190 (257)
T TIGR03611 140 --YVHAQALFLY-PAD--------WISENAARLAADEAHALA-HFP-GK-ANVLRRI-NAL-----EAFDV--------- 190 (257)
T ss_pred --hhhhhhhhhc-ccc--------Hhhccchhhhhhhhhccc-ccC-cc-HHHHHHH-HHH-----HcCCc---------
Confidence 0000000000 000 000000000000000000 000 00 0000000 000 00110
Q ss_pred cCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHH
Q 041488 318 YGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMA 397 (402)
Q Consensus 318 ~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~ 397 (402)
...+.++ ++|+++++|++|.++|++.++++++.+++ .+++.++++||. ...+.|+++.+.|.+
T Consensus 191 -------~~~~~~i--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~---~~~~~~~~~~~~i~~ 253 (257)
T TIGR03611 191 -------SARLDRI--QHPVLLIANRDDMLVPYTQSLRLAAALPN-----AQLKLLPYGGHA---SNVTDPETFNRALLD 253 (257)
T ss_pred -------HHHhccc--CccEEEEecCcCcccCHHHHHHHHHhcCC-----ceEEEECCCCCC---ccccCHHHHHHHHHH
Confidence 1125677 79999999999999999999999999988 788999999999 356899999999999
Q ss_pred HHhc
Q 041488 398 FFKL 401 (402)
Q Consensus 398 fl~~ 401 (402)
||++
T Consensus 254 fl~~ 257 (257)
T TIGR03611 254 FLKT 257 (257)
T ss_pred HhcC
Confidence 9974
No 26
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.94 E-value=1.4e-26 Score=200.27 Aligned_cols=240 Identities=18% Similarity=0.190 Sum_probs=141.2
Q ss_pred CcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHH
Q 041488 82 LPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHV 161 (402)
Q Consensus 82 ~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l 161 (402)
++|||+||+++++..| ..++..|. .+|+|+++|+||||.|+... .++++++ ++.+
T Consensus 14 ~~ivllHG~~~~~~~w------~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~----------~~~~~~~--------~~~l 68 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW------RCIDEELS-SHFTLHLVDLPGFGRSRGFG----------ALSLADM--------AEAV 68 (256)
T ss_pred CeEEEECCCCCChhHH------HHHHHHHh-cCCEEEEecCCCCCCCCCCC----------CCCHHHH--------HHHH
Confidence 4699999999999999 66788885 56999999999999997421 1244433 3333
Q ss_pred HHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCch-hHHHHhhhhhHHHHHHHhcCCCCCCchH
Q 041488 162 HDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTS-PLAKNAADNFLAEALYWLGLDEFDPRGE 239 (402)
Q Consensus 162 ~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 239 (402)
.+ +. ++++++||||||.+++.++.++| ++|+++|++++......... +... .. ........+. . ....
T Consensus 69 ~~-~~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lili~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~--~--~~~~ 138 (256)
T PRK10349 69 LQ-QAPDKAIWLGWSLGGLVASQIALTHP--ERVQALVTVASSPCFSARDEWPGIK--PD-VLAGFQQQLS--D--DFQR 138 (256)
T ss_pred Hh-cCCCCeEEEEECHHHHHHHHHHHhCh--HhhheEEEecCccceecCCCCCccc--HH-HHHHHHHHHH--h--chHH
Confidence 33 34 79999999999999999999988 99999999987543211100 0000 00 0000000000 0 0001
Q ss_pred HHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccC
Q 041488 240 AVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYG 319 (402)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (402)
..+.+.................. ...+.. .+.. ....+........ ..+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~-~~~~~~~~~~~~~-----~~~~----------- 188 (256)
T PRK10349 139 TVERFLALQTMGTETARQDARAL------------KKTVLA-LPMP-EVDVLNGGLEILK-----TVDL----------- 188 (256)
T ss_pred HHHHHHHHHHccCchHHHHHHHH------------HHHhhc-cCCC-cHHHHHHHHHHHH-----hCcc-----------
Confidence 11111111000000000000000 000000 0000 0000000000000 0010
Q ss_pred CCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHH
Q 041488 320 QPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFF 399 (402)
Q Consensus 320 ~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl 399 (402)
...+.++ ++|+|+++|++|.++|++.++.+.+.+++ .+++++|++||+. +.+.|++|.+.+.+|-
T Consensus 189 -----~~~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~i~~-----~~~~~i~~~gH~~---~~e~p~~f~~~l~~~~ 253 (256)
T PRK10349 189 -----RQPLQNV--SMPFLRLYGYLDGLVPRKVVPMLDKLWPH-----SESYIFAKAAHAP---FISHPAEFCHLLVALK 253 (256)
T ss_pred -----HHHHhhc--CCCeEEEecCCCccCCHHHHHHHHHhCCC-----CeEEEeCCCCCCc---cccCHHHHHHHHHHHh
Confidence 1126677 89999999999999999999999999988 8999999999994 6799999999999986
Q ss_pred hc
Q 041488 400 KL 401 (402)
Q Consensus 400 ~~ 401 (402)
++
T Consensus 254 ~~ 255 (256)
T PRK10349 254 QR 255 (256)
T ss_pred cc
Confidence 54
No 27
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.94 E-value=5.3e-26 Score=196.80 Aligned_cols=240 Identities=13% Similarity=0.117 Sum_probs=146.1
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
..+++|||+||++++...| ..++..| .++|+|+++|+||||.|.... .+++++++. |+.+++
T Consensus 14 ~~~~~iv~lhG~~~~~~~~------~~~~~~l-~~~~~vi~~D~~G~G~s~~~~----------~~~~~~~~~-d~~~~l 75 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNL------GVLARDL-VNDHDIIQVDMRNHGLSPRDP----------VMNYPAMAQ-DLLDTL 75 (255)
T ss_pred CCCCCEEEECCCCCchhHH------HHHHHHH-hhCCeEEEECCCCCCCCCCCC----------CCCHHHHHH-HHHHHH
Confidence 4588999999999999988 6677777 468999999999999997521 246776654 555544
Q ss_pred HHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCc
Q 041488 159 QHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPR 237 (402)
Q Consensus 159 ~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 237 (402)
+ .++ ++++++||||||.+++.++.++| ++|+++|++++......... ... ....+..... ... ..
T Consensus 76 ~----~l~~~~~~lvGhS~Gg~va~~~a~~~~--~~v~~lvli~~~~~~~~~~~-~~~-----~~~~~~~~~~-~~~-~~ 141 (255)
T PRK10673 76 D----ALQIEKATFIGHSMGGKAVMALTALAP--DRIDKLVAIDIAPVDYHVRR-HDE-----IFAAINAVSE-AGA-TT 141 (255)
T ss_pred H----HcCCCceEEEEECHHHHHHHHHHHhCH--hhcceEEEEecCCCCccchh-hHH-----HHHHHHHhhh-ccc-cc
Confidence 4 456 78999999999999999999987 99999999865332111000 000 0000000000 000 11
Q ss_pred hHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHH-HHHHHHHHHhcCceeeecCCccchhhc
Q 041488 238 GEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTK-NMIHVAQMIREGTIAMYDYNNKEENKK 316 (402)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (402)
.............. .....+.... + .......... .+..+.. ..
T Consensus 142 ~~~~~~~~~~~~~~--~~~~~~~~~~--------------~-~~~~~~~~~~~~~~~~~~------------------~~ 186 (255)
T PRK10673 142 RQQAAAIMRQHLNE--EGVIQFLLKS--------------F-VDGEWRFNVPVLWDQYPH------------------IV 186 (255)
T ss_pred HHHHHHHHHHhcCC--HHHHHHHHhc--------------C-CcceeEeeHHHHHHhHHH------------------Hh
Confidence 00000011000000 0000000000 0 0000000000 0000000 00
Q ss_pred ccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHH
Q 041488 317 HYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 396 (402)
Q Consensus 317 ~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~ 396 (402)
. ...+.++ ++|+|+|+|++|..++++..+.+.+.+++ .++++++++||. ...+.|+++.+.|.
T Consensus 187 ~-------~~~~~~~--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~---~~~~~p~~~~~~l~ 249 (255)
T PRK10673 187 G-------WEKIPAW--PHPALFIRGGNSPYVTEAYRDDLLAQFPQ-----ARAHVIAGAGHW---VHAEKPDAVLRAIR 249 (255)
T ss_pred C-------CcccCCC--CCCeEEEECCCCCCCCHHHHHHHHHhCCC-----cEEEEeCCCCCe---eeccCHHHHHHHHH
Confidence 0 0115566 79999999999999999999999999998 899999999998 46788999999999
Q ss_pred HHHhcC
Q 041488 397 AFFKLQ 402 (402)
Q Consensus 397 ~fl~~~ 402 (402)
+||+++
T Consensus 250 ~fl~~~ 255 (255)
T PRK10673 250 RYLNDK 255 (255)
T ss_pred HHHhcC
Confidence 999863
No 28
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.94 E-value=4.5e-26 Score=202.79 Aligned_cols=277 Identities=16% Similarity=0.157 Sum_probs=161.8
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccc-cccC--------------C-----CCCCHHHHHHhCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVT-WLLL--------------P-----PEQSLAFLLADNGY 115 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-~~~~--------------~-----~~~~~~~~l~~~g~ 115 (402)
+.+.||..|.++.|... .++.+|+++||++.+... +... + ....+++.|.++||
T Consensus 2 ~~~~~g~~l~~~~~~~~------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~ 75 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGY 75 (332)
T ss_pred ccCCCCCeEEEeeeecc------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCC
Confidence 45789999999998664 347899999999999862 1000 0 01357899999999
Q ss_pred cEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHH-------------------Hh--CCcceEEec
Q 041488 116 DVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHD-------------------QT--GQKPHYVGH 174 (402)
Q Consensus 116 ~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~-------------------~~--~~~~~lvGh 174 (402)
+|+++|+||||.|.+.... ..+ -.+++++.. |+..+++.+.+ .. +.+++++||
T Consensus 76 ~V~~~D~rGHG~S~~~~~~----~g~-~~~~~~~v~-Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~Gh 149 (332)
T TIGR01607 76 SVYGLDLQGHGESDGLQNL----RGH-INCFDDLVY-DVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGL 149 (332)
T ss_pred cEEEecccccCCCcccccc----ccc-hhhHHHHHH-HHHHHHHHhhhhhccccccccccccccccccccCCCceeEeec
Confidence 9999999999999863210 011 126777754 88888888765 23 258999999
Q ss_pred ChhHHHHHHHhcCCCcc------cccchhhcccccccccCCchh--H-HHHhhhhhHHHHHHHhcCCCCCCchHHHHHHH
Q 041488 175 SLGTLIALASFSKDQPV------NKLRSAALLSPIAYVGQMTSP--L-AKNAADNFLAEALYWLGLDEFDPRGEAVVKLL 245 (402)
Q Consensus 175 S~Gg~~a~~~a~~~p~~------~~v~~~v~~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 245 (402)
||||.+++.++...+.. ..++++|+++|.........+ . ...........+....+...+.....
T Consensus 150 SmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~------ 223 (332)
T TIGR01607 150 SMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIR------ 223 (332)
T ss_pred cCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccc------
Confidence 99999999988653211 268999988887532211000 0 00000001111111111000000000
Q ss_pred HHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCC---CcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCC
Q 041488 246 KNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEP---QATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPN 322 (402)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (402)
... +....+.+..+.. ...+...+......... ..
T Consensus 224 --~~~--------------------~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~-----------------~~--- 261 (332)
T TIGR01607 224 --YEK--------------------SPYVNDIIKFDKFRYDGGITFNLASELIKATDT-----------------LD--- 261 (332)
T ss_pred --ccc--------------------ChhhhhHHhcCccccCCcccHHHHHHHHHHHHH-----------------HH---
Confidence 000 0000000100000 01111222222111100 00
Q ss_pred CCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHh
Q 041488 323 PPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 400 (402)
Q Consensus 323 ~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~ 400 (402)
..+.+++.++|+|+++|++|.+++++.++.+++.+.. .+.+++++++++|.. ..+..++++.+.|.+||+
T Consensus 262 ---~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~---~~~~l~~~~g~~H~i--~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 262 ---CDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI---SNKELHTLEDMDHVI--TIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred ---hhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC---CCcEEEEECCCCCCC--ccCCCHHHHHHHHHHHhh
Confidence 0022332258999999999999999999999887754 247889999999993 444457899999999996
No 29
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.94 E-value=4.7e-25 Score=198.69 Aligned_cols=282 Identities=11% Similarity=0.093 Sum_probs=167.3
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQ 159 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~ 159 (402)
.++|||++||+..+...++.. +.++++..|+++||+|+++|+||+|.|++ .++++++..+|+.++++
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~-~~~~~~~~L~~~G~~V~~~D~~g~g~s~~------------~~~~~d~~~~~~~~~v~ 127 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQ-EDRSLVRGLLERGQDVYLIDWGYPDRADR------------YLTLDDYINGYIDKCVD 127 (350)
T ss_pred CCCcEEEeccccccceeccCC-CCchHHHHHHHCCCeEEEEeCCCCCHHHh------------cCCHHHHHHHHHHHHHH
Confidence 356899999987666554322 34789999999999999999999998764 23778887778999999
Q ss_pred HHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCch
Q 041488 160 HVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRG 238 (402)
Q Consensus 160 ~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 238 (402)
++++..+ ++++++||||||.+++.++..+| ++|+++|+++|..........................+ ...|..
T Consensus 128 ~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~--~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~ 202 (350)
T TIGR01836 128 YICRTSKLDQISLLGICQGGTFSLCYAALYP--DKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTM---GNIPGE 202 (350)
T ss_pred HHHHHhCCCcccEEEECHHHHHHHHHHHhCc--hheeeEEEeccccccCCCCchhhhhccccCHHHHHHhc---CCCCHH
Confidence 9999998 89999999999999999999987 89999999998765433222111111110011111111 111211
Q ss_pred HHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccc------hhcccCCCcchHHHHHHHHHHH-hcCceeeecCCcc
Q 041488 239 EAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVD------VFLEHEPQATSTKNMIHVAQMI-REGTIAMYDYNNK 311 (402)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 311 (402)
. .......+.. ....+......... ..+.+.+. .+....+ ......+..+...+ ....+..-
T Consensus 203 ~-~~~~f~~l~p-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~w~~d~~-~~~~~~~~~~~~~~~~~n~l~~g----- 271 (350)
T TIGR01836 203 L-LNLTFLMLKP-FSLGYQKYVNLVDI---LEDERKVENFLRMEKWIFDSP-DQAGEAFRQFVKDFYQQNGLING----- 271 (350)
T ss_pred H-HHHHHHhcCc-chhhhHHHHHHHHh---cCChHHHHHHHHHHHHhcCCc-CccHHHHHHHHHHHHhcCcccCC-----
Confidence 1 1110000000 00000000000000 00000001 1111111 11111222222111 11111000
Q ss_pred chhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhc
Q 041488 312 EENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVL 391 (402)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 391 (402)
.... .....++.++ ++|+++++|++|.++|++.++.+++.+++ ...++++++ +||.+++...+.++++
T Consensus 272 --~~~~----~~~~~~l~~i--~~Pvliv~G~~D~i~~~~~~~~~~~~~~~---~~~~~~~~~-~gH~~~~~~~~~~~~v 339 (350)
T TIGR01836 272 --EVEI----GGRKVDLKNI--KMPILNIYAERDHLVPPDASKALNDLVSS---EDYTELSFP-GGHIGIYVSGKAQKEV 339 (350)
T ss_pred --eeEE----CCEEccHHhC--CCCeEEEecCCCCcCCHHHHHHHHHHcCC---CCeEEEEcC-CCCEEEEECchhHhhh
Confidence 0000 0012236778 89999999999999999999999999876 246777777 7999877777778999
Q ss_pred cHHHHHHHhcC
Q 041488 392 YEPLMAFFKLQ 402 (402)
Q Consensus 392 ~~~i~~fl~~~ 402 (402)
++.|.+||.++
T Consensus 340 ~~~i~~wl~~~ 350 (350)
T TIGR01836 340 PPAIGKWLQAR 350 (350)
T ss_pred hHHHHHHHHhC
Confidence 99999999864
No 30
>PRK07581 hypothetical protein; Validated
Probab=99.94 E-value=1.9e-26 Score=207.42 Aligned_cols=293 Identities=11% Similarity=0.024 Sum_probs=151.6
Q ss_pred CCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHH---HHHHhCCCcEEeecCCCCcccCCCCCCCC
Q 041488 60 DGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLA---FLLADNGYDVWLANTRGTKYSRGHVSLSP 136 (402)
Q Consensus 60 dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~---~~l~~~g~~v~~~D~rG~G~S~~~~~~~~ 136 (402)
+|.+++|...+... .+..++||+.||++++...| ..+. ..|...+|+|+++|+||||.|+.+....+
T Consensus 24 ~~~~l~y~~~G~~~----~~~~~~vll~~~~~~~~~~~------~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~ 93 (339)
T PRK07581 24 PDARLAYKTYGTLN----AAKDNAILYPTWYSGTHQDN------EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPA 93 (339)
T ss_pred CCceEEEEecCccC----CCCCCEEEEeCCCCCCcccc------hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCC
Confidence 45667776665421 02345677777777666665 2221 24545789999999999999975322100
Q ss_pred CCcccccccHHHH----hhcchHHHHHHHHHHhC-Cc-ceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCc
Q 041488 137 DDSAFWDWTWDEL----VAYDLPATLQHVHDQTG-QK-PHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMT 210 (402)
Q Consensus 137 ~~~~~~~~~~~~~----~~~d~~~~v~~l~~~~~-~~-~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~ 210 (402)
.|+++++ ..+|+.+....+.+.++ ++ ++||||||||++++.++.++| ++|+++|++++......
T Consensus 94 ------~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P--~~V~~Lvli~~~~~~~~-- 163 (339)
T PRK07581 94 ------PFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYP--DMVERAAPIAGTAKTTP-- 163 (339)
T ss_pred ------CCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCH--HHHhhheeeecCCCCCH--
Confidence 1233321 12255555556777888 88 579999999999999999998 99999999986543211
Q ss_pred hhHHHHhhhhhHHHHHHHhcC----CCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCC----ccccchhcccC
Q 041488 211 SPLAKNAADNFLAEALYWLGL----DEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLN----SSIVDVFLEHE 282 (402)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 282 (402)
............+...... ....|. .....+........ ....++... ... ... ......+....
T Consensus 164 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 236 (339)
T PRK07581 164 --HNFVFLEGLKAALTADPAFNGGWYAEPPE-RGLRAHARVYAGWG--FSQAFYRQE-LWR-AMGYASLEDFLVGFWEGN 236 (339)
T ss_pred --HHHHHHHHHHHHHHhCCCCCCCCCCCcHH-HHHHHHHHHHHHHH--hHHHHHHhh-hcc-ccChhhHHHHHHHHHHHh
Confidence 1000000000000000000 000010 00000000000000 000000000 000 000 00000000000
Q ss_pred CCcchHHHHHHHHHHHhcCce-eeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHcc
Q 041488 283 PQATSTKNMIHVAQMIREGTI-AMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLN 361 (402)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~ 361 (402)
....................+ ....+ .......+.+| ++|+|+|+|++|.++|+..++.+.+.++
T Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~d~~~~L~~I--~~PtLvI~G~~D~~~p~~~~~~l~~~ip 302 (339)
T PRK07581 237 FLPRDPNNLLAMLWTWQRGDISRNPAY------------GGDLAAALGSI--TAKTFVMPISTDLYFPPEDCEAEAALIP 302 (339)
T ss_pred hcccCcccHHHHHHHhhhcccccCccc------------CCCHHHHHhcC--CCCEEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 000000000000000000000 00000 00001126678 8999999999999999999999999998
Q ss_pred CCCCCceEEEECCC-CCccceecccCcchhccHHHHHHHhc
Q 041488 362 DHEGDKLVVQYRQD-YAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 362 ~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
+ .+++++++ +||.. ..++++++.+.|.+||++
T Consensus 303 ~-----a~l~~i~~~~GH~~---~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 303 N-----AELRPIESIWGHLA---GFGQNPADIAFIDAALKE 335 (339)
T ss_pred C-----CeEEEeCCCCCccc---cccCcHHHHHHHHHHHHH
Confidence 8 89999998 99994 568999999999999986
No 31
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.94 E-value=2.4e-25 Score=191.87 Aligned_cols=239 Identities=15% Similarity=0.190 Sum_probs=142.7
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQ 159 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~ 159 (402)
.+|+|||+||++++...| ..++..| +.||+|+++|+||||.|..... .+++++++. | +.
T Consensus 12 ~~~~li~~hg~~~~~~~~------~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~---------~~~~~~~~~-~----~~ 70 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMW------DPVLPAL-TPDFRVLRYDKRGHGLSDAPEG---------PYSIEDLAD-D----VL 70 (251)
T ss_pred CCCeEEEEcCcccchhhH------HHHHHHh-hcccEEEEecCCCCCCCCCCCC---------CCCHHHHHH-H----HH
Confidence 468899999999999988 5677777 5799999999999999864211 235555543 3 44
Q ss_pred HHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCch
Q 041488 160 HVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRG 238 (402)
Q Consensus 160 ~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 238 (402)
.+.+.++ ++++++||||||.+++.++.++| ++|+++|++++........ ........ +. .. ...
T Consensus 71 ~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p--~~v~~li~~~~~~~~~~~~-~~~~~~~~-----~~----~~---~~~ 135 (251)
T TIGR02427 71 ALLDHLGIERAVFCGLSLGGLIAQGLAARRP--DRVRALVLSNTAAKIGTPE-SWNARIAA-----VR----AE---GLA 135 (251)
T ss_pred HHHHHhCCCceEEEEeCchHHHHHHHHHHCH--HHhHHHhhccCccccCchh-hHHHHHhh-----hh----hc---cHH
Confidence 4445556 78999999999999999999987 9999999998764322111 00000000 00 00 000
Q ss_pred HHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhccc
Q 041488 239 EAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHY 318 (402)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (402)
.............. + ..........+.... .......+....... ...+
T Consensus 136 ~~~~~~~~~~~~~~----------~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~----------- 184 (251)
T TIGR02427 136 ALADAVLERWFTPG----------F----REAHPARLDLYRNML-VRQPPDGYAGCCAAI-----RDAD----------- 184 (251)
T ss_pred HHHHHHHHHHcccc----------c----ccCChHHHHHHHHHH-HhcCHHHHHHHHHHH-----hccc-----------
Confidence 00011110000000 0 000000000000000 000000000000000 0000
Q ss_pred CCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHH
Q 041488 319 GQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAF 398 (402)
Q Consensus 319 ~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~f 398 (402)
....+.++ ++|+++++|++|.++|++..+.+.+.+++ .++++++++||.. ..+.|+++.+.|.+|
T Consensus 185 -----~~~~~~~~--~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~---~~~~p~~~~~~i~~f 249 (251)
T TIGR02427 185 -----FRDRLGAI--AVPTLCIAGDQDGSTPPELVREIADLVPG-----ARFAEIRGAGHIP---CVEQPEAFNAALRDF 249 (251)
T ss_pred -----HHHHhhhc--CCCeEEEEeccCCcCChHHHHHHHHhCCC-----ceEEEECCCCCcc---cccChHHHHHHHHHH
Confidence 00125567 79999999999999999999999999887 7889999999984 457899999999999
Q ss_pred Hh
Q 041488 399 FK 400 (402)
Q Consensus 399 l~ 400 (402)
++
T Consensus 250 l~ 251 (251)
T TIGR02427 250 LR 251 (251)
T ss_pred hC
Confidence 84
No 32
>PRK13604 luxD acyl transferase; Provisional
Probab=99.94 E-value=8e-26 Score=192.22 Aligned_cols=131 Identities=15% Similarity=0.175 Sum_probs=103.4
Q ss_pred eEEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCC-cccCCC
Q 041488 53 ASVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGT-KYSRGH 131 (402)
Q Consensus 53 ~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~-G~S~~~ 131 (402)
..++.+.||..|..|..++.+. ...+.++||++||++.+...+ ..++++|+++||.|+.||.||+ |.|++.
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~--~~~~~~~vIi~HGf~~~~~~~------~~~A~~La~~G~~vLrfD~rg~~GeS~G~ 82 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKEN--SPKKNNTILIASGFARRMDHF------AGLAEYLSSNGFHVIRYDSLHHVGLSSGT 82 (307)
T ss_pred hheEEcCCCCEEEEEEEcCccc--CCCCCCEEEEeCCCCCChHHH------HHHHHHHHHCCCEEEEecCCCCCCCCCCc
Confidence 3448899999999999977521 224568899999999987544 6899999999999999999987 999873
Q ss_pred CCCCCCCcccccccHHHHhhcchHHHHHHHHHHhCCcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 132 VSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
.. .+++... .+|+.++++++++...+++.|+||||||.+++..|.. ..++++|+.+|...
T Consensus 83 ~~---------~~t~s~g-~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~----~~v~~lI~~sp~~~ 142 (307)
T PRK13604 83 ID---------EFTMSIG-KNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINE----IDLSFLITAVGVVN 142 (307)
T ss_pred cc---------cCccccc-HHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcC----CCCCEEEEcCCccc
Confidence 32 1233222 4699999999987633889999999999999777764 34899999999865
No 33
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.94 E-value=4e-25 Score=198.25 Aligned_cols=272 Identities=17% Similarity=0.192 Sum_probs=156.6
Q ss_pred EcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCC
Q 041488 57 TTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSP 136 (402)
Q Consensus 57 ~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~ 136 (402)
.+.+|++++|...+.. .+++|||+||++.+...| +.++..|+ ++|+|+++|+||||.|+++....
T Consensus 110 ~~~~~~~~~y~~~G~~-------~~~~ivllHG~~~~~~~w------~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~~- 174 (383)
T PLN03084 110 ASSDLFRWFCVESGSN-------NNPPVLLIHGFPSQAYSY------RKVLPVLS-KNYHAIAFDWLGFGFSDKPQPGY- 174 (383)
T ss_pred EcCCceEEEEEecCCC-------CCCeEEEECCCCCCHHHH------HHHHHHHh-cCCEEEEECCCCCCCCCCCcccc-
Confidence 3567788877765433 367999999999999999 67888885 58999999999999998643210
Q ss_pred CCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHH
Q 041488 137 DDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAK 215 (402)
Q Consensus 137 ~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~ 215 (402)
-..|++++++. | +..++++++ ++++++|||+||++++.++.++| ++|+++|+++|.........+..
T Consensus 175 ----~~~ys~~~~a~-~----l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P--~~v~~lILi~~~~~~~~~~~p~~- 242 (383)
T PLN03084 175 ----GFNYTLDEYVS-S----LESLIDELKSDKVSLVVQGYFSPPVVKYASAHP--DKIKKLILLNPPLTKEHAKLPST- 242 (383)
T ss_pred ----cccCCHHHHHH-H----HHHHHHHhCCCCceEEEECHHHHHHHHHHHhCh--HhhcEEEEECCCCccccccchHH-
Confidence 01346666654 3 444555566 79999999999999999999988 99999999998643211000000
Q ss_pred HhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccC-CCcchHHHHHHH
Q 041488 216 NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHE-PQATSTKNMIHV 294 (402)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 294 (402)
... +...+....... .+. ......... .. ...........+.... ..+.....+..+
T Consensus 243 -l~~-~~~~l~~~~~~~--~~~-~~~~~~~~~-~~----------------~~~~~~e~~~~~~~~~~~~~~~~~~l~~~ 300 (383)
T PLN03084 243 -LSE-FSNFLLGEIFSQ--DPL-RASDKALTS-CG----------------PYAMKEDDAMVYRRPYLTSGSSGFALNAI 300 (383)
T ss_pred -HHH-HHHHHhhhhhhc--chH-HHHhhhhcc-cC----------------ccCCCHHHHHHHhccccCCcchHHHHHHH
Confidence 000 000000000000 000 000000000 00 0000001111111100 000000011111
Q ss_pred HHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECC
Q 041488 295 AQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQ 374 (402)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (402)
.+.+.. ....+ ...... .....++ ++|+|+|+|+.|.+++++.++.+++. .+ .+++++|
T Consensus 301 ~r~~~~-~l~~~-----~~~l~~-------~l~~~~i--~vPvLiI~G~~D~~v~~~~~~~~a~~-~~-----a~l~vIp 359 (383)
T PLN03084 301 SRSMKK-ELKKY-----IEEMRS-------ILTDKNW--KTPITVCWGLRDRWLNYDGVEDFCKS-SQ-----HKLIELP 359 (383)
T ss_pred HHHhhc-ccchh-----hHHHHh-------hhccccC--CCCEEEEeeCCCCCcCHHHHHHHHHh-cC-----CeEEEEC
Confidence 111110 00000 000000 0001346 78999999999999999988888886 35 7889999
Q ss_pred CCCccceecccCcchhccHHHHHHHhc
Q 041488 375 DYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 375 ~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
++||+ .+.+.|+++.+.|.+||.+
T Consensus 360 ~aGH~---~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 360 MAGHH---VQEDCGEELGGIISGILSK 383 (383)
T ss_pred CCCCC---cchhCHHHHHHHHHHHhhC
Confidence 99999 4789999999999999964
No 34
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.94 E-value=7e-26 Score=198.64 Aligned_cols=263 Identities=18% Similarity=0.200 Sum_probs=149.4
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhC-CCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADN-GYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
..+++||++|||+++...| +.....|.+. |++|+++|.+|+|.|+...... . |+.. +....
T Consensus 56 ~~~~pvlllHGF~~~~~~w------~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~----~---y~~~-----~~v~~ 117 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSW------RRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGP----L---YTLR-----ELVEL 117 (326)
T ss_pred CCCCcEEEeccccCCcccH------hhhccccccccceEEEEEecCCCCcCCCCCCCC----c---eehh-----HHHHH
Confidence 4689999999999999999 5555556544 5999999999999655422211 1 2333 33445
Q ss_pred HHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhh---cccccccccCCchhHHHHhhhhhHHHHHHHhcCCC
Q 041488 158 LQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAA---LLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDE 233 (402)
Q Consensus 158 v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
+..+..... .+++++|||+||.++..+|+.+| +.|+++| ++++..................+............
T Consensus 118 i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P--~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 195 (326)
T KOG1454|consen 118 IRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYP--ETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSL 195 (326)
T ss_pred HHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCc--ccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCcccc
Confidence 666666666 78999999999999999999988 9999999 66666554333222211111111110000000000
Q ss_pred CCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccch
Q 041488 234 FDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEE 313 (402)
Q Consensus 234 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
..+.....+.+....+... .+.....+.......... ...+. +.....-+.... .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~-~- 250 (326)
T KOG1454|consen 196 TEPVRLVSEGLLRCLKVVY-------------TDPSRLLEKLLHLLSRPV-------KEHFH---RDARLSLFLELL-G- 250 (326)
T ss_pred ccchhheeHhhhcceeeec-------------cccccchhhhhhheeccc-------ccchh---hhheeeEEEecc-C-
Confidence 0111000011111111000 000000000000000000 00000 000000000000 0
Q ss_pred hhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccH
Q 041488 314 NKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYE 393 (402)
Q Consensus 314 ~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 393 (402)
...-....++++. ++|+|+++|++|+++|.+.++.+.+.+++ +++++++++||.+ +.+.|+++++
T Consensus 251 ------~~~~~~~~~~~i~-~~pvlii~G~~D~~~p~~~~~~~~~~~pn-----~~~~~I~~~gH~~---h~e~Pe~~~~ 315 (326)
T KOG1454|consen 251 ------FDENLLSLIKKIW-KCPVLIIWGDKDQIVPLELAEELKKKLPN-----AELVEIPGAGHLP---HLERPEEVAA 315 (326)
T ss_pred ------ccchHHHhhcccc-CCceEEEEcCcCCccCHHHHHHHHhhCCC-----ceEEEeCCCCccc---ccCCHHHHHH
Confidence 0000011245662 49999999999999999999999999977 9999999999995 7799999999
Q ss_pred HHHHHHhc
Q 041488 394 PLMAFFKL 401 (402)
Q Consensus 394 ~i~~fl~~ 401 (402)
.|..|+.+
T Consensus 316 ~i~~Fi~~ 323 (326)
T KOG1454|consen 316 LLRSFIAR 323 (326)
T ss_pred HHHHHHHH
Confidence 99999975
No 35
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.93 E-value=1.5e-25 Score=192.48 Aligned_cols=242 Identities=19% Similarity=0.193 Sum_probs=140.5
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQH 160 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~ 160 (402)
.++|||+||++++...| ..++..|. .+|+|+++|+||||.|.... .+ ++..+++.
T Consensus 4 ~~~iv~~HG~~~~~~~~------~~~~~~l~-~~~~vi~~d~~G~G~s~~~~----------~~--------~~~~~~~~ 58 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVF------RCLDEELS-AHFTLHLVDLPGHGRSRGFG----------PL--------SLADAAEA 58 (245)
T ss_pred CceEEEEcCCCCchhhH------HHHHHhhc-cCeEEEEecCCcCccCCCCC----------Cc--------CHHHHHHH
Confidence 37899999999999998 67788884 67999999999999986421 11 33344555
Q ss_pred HHHHhCCcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHH
Q 041488 161 VHDQTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEA 240 (402)
Q Consensus 161 l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 240 (402)
+.+...++++++||||||.+++.++.++| ++++++|++++................. ....+...+. .. ....
T Consensus 59 ~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~~il~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~---~~~~ 131 (245)
T TIGR01738 59 IAAQAPDPAIWLGWSLGGLVALHIAATHP--DRVRALVTVASSPCFSAREDWPEGIKPD-VLTGFQQQLS-DD---YQRT 131 (245)
T ss_pred HHHhCCCCeEEEEEcHHHHHHHHHHHHCH--HhhheeeEecCCcccccCCcccccCCHH-HHHHHHHHhh-hh---HHHH
Confidence 55544579999999999999999999987 9999999998764321110000000000 0000000000 00 0000
Q ss_pred HHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCC
Q 041488 241 VVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQ 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (402)
...+................ ............ ....+....... ...+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~------------- 179 (245)
T TIGR01738 132 IERFLALQTLGTPTARQDAR-------------ALKQTLLARPTP-NVQVLQAGLEIL-----ATVD------------- 179 (245)
T ss_pred HHHHHHHHHhcCCccchHHH-------------HHHHHhhccCCC-CHHHHHHHHHHh-----hccc-------------
Confidence 01110000000000000000 000000000000 000000000000 0000
Q ss_pred CCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHH
Q 041488 321 PNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFF 399 (402)
Q Consensus 321 ~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl 399 (402)
....+.++ ++|+++++|++|.++|++..+.+.+.+++ .+++++|++||+. ..++|+++.+.|.+|+
T Consensus 180 ---~~~~l~~i--~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~---~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 180 ---LRQPLQNI--SVPFLRLYGYLDGLVPAKVVPYLDKLAPH-----SELYIFAKAAHAP---FLSHAEAFCALLVAFK 245 (245)
T ss_pred ---HHHHHhcC--CCCEEEEeecCCcccCHHHHHHHHHhCCC-----CeEEEeCCCCCCc---cccCHHHHHHHHHhhC
Confidence 00125677 89999999999999999999999999987 8999999999994 5689999999999986
No 36
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.93 E-value=1.4e-24 Score=191.22 Aligned_cols=125 Identities=26% Similarity=0.339 Sum_probs=89.5
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
+.+.+|..+.+...+.. +.+++|||+||++++...|. ..+...+.+.||+|+++|+||||.|..+....
T Consensus 6 ~~~~~~~~~~~~~~~~~------~~~~~vl~~hG~~g~~~~~~-----~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~ 74 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGE------GEKIKLLLLHGGPGMSHEYL-----ENLRELLKEEGREVIMYDQLGCGYSDQPDDSD 74 (288)
T ss_pred eecCCCCeEEEEeccCC------CCCCeEEEEcCCCCccHHHH-----HHHHHHHHhcCCEEEEEcCCCCCCCCCCCccc
Confidence 34556666666655432 34689999999876665442 34555665569999999999999997532110
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
. .+++++++. .+..+.+.++ ++++++||||||.+++.++.++| ++|+++|++++..
T Consensus 75 ----~--~~~~~~~~~-----~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 131 (288)
T TIGR01250 75 ----E--LWTIDYFVD-----ELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYG--QHLKGLIISSMLD 131 (288)
T ss_pred ----c--cccHHHHHH-----HHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCc--cccceeeEecccc
Confidence 0 135555543 3455566677 78999999999999999999987 9999999988754
No 37
>PLN02511 hydrolase
Probab=99.93 E-value=1.4e-24 Score=197.10 Aligned_cols=135 Identities=19% Similarity=0.222 Sum_probs=97.4
Q ss_pred EEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccc-cccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCC
Q 041488 54 SVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVT-WLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHV 132 (402)
Q Consensus 54 ~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~ 132 (402)
+.+.+.||..+.+........ .....+|+||++||+++++.. |. ..++..+.++||+|+++|+||||.|....
T Consensus 74 e~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~-----~~~~~~~~~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 74 ECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYV-----RHMLLRARSKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred EEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHH-----HHHHHHHHHCCCEEEEEecCCCCCCCCCC
Confidence 448899999888755432110 012347889999999887654 41 34566667899999999999999997521
Q ss_pred CCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 133 SLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
. .+ ....+ .+|+.++++++..+++ .+++++||||||.+++.++.++|....|++++++++..
T Consensus 148 ~------~~---~~~~~-~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 148 P------QF---YSASF-TGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred c------CE---EcCCc-hHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 1 11 11122 3489999999999888 79999999999999999999987222388888776643
No 38
>PRK10985 putative hydrolase; Provisional
Probab=99.93 E-value=1.2e-24 Score=193.80 Aligned_cols=136 Identities=17% Similarity=0.121 Sum_probs=97.2
Q ss_pred eEEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCC
Q 041488 53 ASVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHV 132 (402)
Q Consensus 53 ~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~ 132 (402)
.+.+.+.||..+.+.....+. ....+|+||++||++++....+. ..++..|.++||+|+++|+||||.+....
T Consensus 33 ~~~~~~~dg~~~~l~w~~~~~---~~~~~p~vll~HG~~g~~~~~~~----~~~~~~l~~~G~~v~~~d~rG~g~~~~~~ 105 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSEDPA---QARHKPRLVLFHGLEGSFNSPYA----HGLLEAAQKRGWLGVVMHFRGCSGEPNRL 105 (324)
T ss_pred eeEEECCCCCEEEEecCCCCc---cCCCCCEEEEeCCCCCCCcCHHH----HHHHHHHHHCCCEEEEEeCCCCCCCccCC
Confidence 345889999887765442221 12357899999999887654212 45788899999999999999999764311
Q ss_pred CCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 133 SLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
+. .+ .... .+|+..+++++.++++ .+++++||||||.+++.++.+++....++++|++++...
T Consensus 106 ---~~--~~---~~~~--~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 106 ---HR--IY---HSGE--TEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred ---cc--eE---CCCc--hHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 10 11 1111 3488889999998888 799999999999998888877542224888888887653
No 39
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.93 E-value=1.8e-24 Score=195.12 Aligned_cols=129 Identities=22% Similarity=0.227 Sum_probs=89.8
Q ss_pred CCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccc-----------cccCCCCCCHH---HHHHhCCCcEEeecCCC
Q 041488 59 KDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVT-----------WLLLPPEQSLA---FLLADNGYDVWLANTRG 124 (402)
Q Consensus 59 ~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-----------~~~~~~~~~~~---~~l~~~g~~v~~~D~rG 124 (402)
.+|.+++|..++..+ ...+++|||+||++++... | ..+. ..|...+|+|+++|+||
T Consensus 13 ~~~~~~~y~~~g~~~----~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w------~~~~~~~~~l~~~~~~vi~~D~~G 82 (351)
T TIGR01392 13 LSDVRVAYETYGTLN----AERSNAVLVCHALTGDAHVAGYHDDGDPGWW------DDLIGPGRAIDTDRYFVVCSNVLG 82 (351)
T ss_pred cCCceEEEEeccccC----CCCCCEEEEcCCcCcchhhcccCCCCCCCch------hhccCCCCCcCCCceEEEEecCCC
Confidence 467788888886531 0235799999999997743 4 2222 24556889999999999
Q ss_pred --CcccCCCCCCCCC----CcccccccHHHHhhcchHHHHHHHHHHhC-Cc-ceEEecChhHHHHHHHhcCCCcccccch
Q 041488 125 --TKYSRGHVSLSPD----DSAFWDWTWDELVAYDLPATLQHVHDQTG-QK-PHYVGHSLGTLIALASFSKDQPVNKLRS 196 (402)
Q Consensus 125 --~G~S~~~~~~~~~----~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~-~~lvGhS~Gg~~a~~~a~~~p~~~~v~~ 196 (402)
||.|... ...+. ...+..+++++++. .+..++++++ ++ ++++||||||++++.++.++| ++|++
T Consensus 83 ~~~g~s~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p--~~v~~ 154 (351)
T TIGR01392 83 GCYGSTGPS-SINPGGRPYGSDFPLITIRDDVK-----AQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYP--ERVRA 154 (351)
T ss_pred CCCCCCCCC-CCCCCCCcCCCCCCCCcHHHHHH-----HHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHCh--Hhhhe
Confidence 5554321 11111 11223456666543 4555566778 77 999999999999999999988 99999
Q ss_pred hhccccccc
Q 041488 197 AALLSPIAY 205 (402)
Q Consensus 197 ~v~~~p~~~ 205 (402)
+|++++...
T Consensus 155 lvl~~~~~~ 163 (351)
T TIGR01392 155 IVVLATSAR 163 (351)
T ss_pred EEEEccCCc
Confidence 999998654
No 40
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=2.9e-24 Score=195.75 Aligned_cols=128 Identities=13% Similarity=0.076 Sum_probs=91.1
Q ss_pred EEcCCCc--EEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC
Q 041488 56 VTTKDGY--ILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS 133 (402)
Q Consensus 56 ~~~~dG~--~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~ 133 (402)
+.+.+|. .+.+..++.. +.+++|||+||++.+...| ......|. ++|+|+++|+||||.|++...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~------~~~p~vvllHG~~~~~~~~------~~~~~~L~-~~~~vi~~D~rG~G~S~~~~~ 150 (402)
T PLN02894 84 FRSASNEPRFINTVTFDSK------EDAPTLVMVHGYGASQGFF------FRNFDALA-SRFRVIAIDQLGWGGSSRPDF 150 (402)
T ss_pred eecccCcCCeEEEEEecCC------CCCCEEEEECCCCcchhHH------HHHHHHHH-hCCEEEEECCCCCCCCCCCCc
Confidence 5555664 6666666533 4578999999999988887 34556675 469999999999999976321
Q ss_pred CCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccccc
Q 041488 134 LSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVG 207 (402)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~ 207 (402)
. ..+.++. .+.+.+.+..+++..+ ++++++||||||.+++.++.++| ++|+++|+++|.....
T Consensus 151 ~--------~~~~~~~-~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p--~~v~~lvl~~p~~~~~ 214 (402)
T PLN02894 151 T--------CKSTEET-EAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHP--EHVQHLILVGPAGFSS 214 (402)
T ss_pred c--------cccHHHH-HHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCc--hhhcEEEEECCccccC
Confidence 0 0011222 1123333444455567 89999999999999999999988 9999999999876443
No 41
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.92 E-value=3.5e-24 Score=192.63 Aligned_cols=118 Identities=18% Similarity=0.202 Sum_probs=82.9
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCcccccc------------ccccCCCCCCHHH---HHHhCCCcEEee
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAV------------TWLLLPPEQSLAF---LLADNGYDVWLA 120 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~------------~~~~~~~~~~~~~---~l~~~g~~v~~~ 120 (402)
....+|..++|...+.+ ++++||+||+.++.. .| ..+.. .|...+|+|+++
T Consensus 40 ~~~~~~~~l~y~~~G~~--------~~p~vll~g~~~~~~~~~~~~~~~~~~~w------~~~v~~~~~L~~~~~~Vi~~ 105 (343)
T PRK08775 40 HAGLEDLRLRYELIGPA--------GAPVVFVAGGISAHRHVAATATFPEKGWW------EGLVGSGRALDPARFRLLAF 105 (343)
T ss_pred CCCCCCceEEEEEeccC--------CCCEEEEecCCCcccccccccCCCCCCcc------hhccCCCCccCccccEEEEE
Confidence 34457888888876532 345777777666655 45 33332 353468999999
Q ss_pred cCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-Ccc-eEEecChhHHHHHHHhcCCCcccccchhh
Q 041488 121 NTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKP-HYVGHSLGTLIALASFSKDQPVNKLRSAA 198 (402)
Q Consensus 121 D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~-~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v 198 (402)
|+||||.|... .+++++++. | +..+++.++ ++. +++||||||++++.++.++| ++|+++|
T Consensus 106 Dl~G~g~s~~~-----------~~~~~~~a~-d----l~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P--~~V~~Lv 167 (343)
T PRK08775 106 DFIGADGSLDV-----------PIDTADQAD-A----IALLLDALGIARLHAFVGYSYGALVGLQFASRHP--ARVRTLV 167 (343)
T ss_pred eCCCCCCCCCC-----------CCCHHHHHH-H----HHHHHHHcCCCcceEEEEECHHHHHHHHHHHHCh--HhhheEE
Confidence 99999977421 225555533 3 444555667 564 79999999999999999988 9999999
Q ss_pred ccccccc
Q 041488 199 LLSPIAY 205 (402)
Q Consensus 199 ~~~p~~~ 205 (402)
++++...
T Consensus 168 Li~s~~~ 174 (343)
T PRK08775 168 VVSGAHR 174 (343)
T ss_pred EECcccc
Confidence 9998643
No 42
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.92 E-value=3.5e-24 Score=189.67 Aligned_cols=123 Identities=20% Similarity=0.180 Sum_probs=91.6
Q ss_pred EEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC
Q 041488 54 SVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS 133 (402)
Q Consensus 54 ~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~ 133 (402)
.++...||..++|...+.+ .+++|||+||++++...+ .+...+...+|+|+++|+||||.|++...
T Consensus 7 ~~~~~~~~~~l~y~~~g~~-------~~~~lvllHG~~~~~~~~-------~~~~~~~~~~~~vi~~D~~G~G~S~~~~~ 72 (306)
T TIGR01249 7 GYLNVSDNHQLYYEQSGNP-------DGKPVVFLHGGPGSGTDP-------GCRRFFDPETYRIVLFDQRGCGKSTPHAC 72 (306)
T ss_pred CeEEcCCCcEEEEEECcCC-------CCCEEEEECCCCCCCCCH-------HHHhccCccCCEEEEECCCCCCCCCCCCC
Confidence 4477788999998776433 256899999988776543 23334445689999999999999985321
Q ss_pred CCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 134 LSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
...++++ |+.+.+..+.+.++ ++++++||||||.+++.++.++| ++|+++|++++..
T Consensus 73 -------~~~~~~~-----~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p--~~v~~lvl~~~~~ 130 (306)
T TIGR01249 73 -------LEENTTW-----DLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHP--EVVTGLVLRGIFL 130 (306)
T ss_pred -------cccCCHH-----HHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHCh--Hhhhhheeecccc
Confidence 0122333 44455666777778 89999999999999999999988 9999999998754
No 43
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.92 E-value=5e-24 Score=184.78 Aligned_cols=116 Identities=20% Similarity=0.271 Sum_probs=86.9
Q ss_pred CCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCC
Q 041488 59 KDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDD 138 (402)
Q Consensus 59 ~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~ 138 (402)
++|.++.+.. ++ +.+|+|||+||++.+...| ..+...|.++||+|+++|+||||.|......
T Consensus 4 ~~~~~~~~~~-~~-------~~~p~vvliHG~~~~~~~w------~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~---- 65 (273)
T PLN02211 4 ENGEEVTDMK-PN-------RQPPHFVLIHGISGGSWCW------YKIRCLMENSGYKVTCIDLKSAGIDQSDADS---- 65 (273)
T ss_pred cccccccccc-cc-------CCCCeEEEECCCCCCcCcH------HHHHHHHHhCCCEEEEecccCCCCCCCCccc----
Confidence 4566655544 22 3478999999999999999 6788889888999999999999987532110
Q ss_pred cccccccHHHHhhcchHHHHHHHHHHh-C-CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 139 SAFWDWTWDELVAYDLPATLQHVHDQT-G-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 139 ~~~~~~~~~~~~~~d~~~~v~~l~~~~-~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
.+++++++. ++.+. + +.+ + ++++++||||||.+++.++.++| ++|+++|++++.
T Consensus 66 ----~~~~~~~~~-~l~~~---i-~~l~~~~~v~lvGhS~GG~v~~~~a~~~p--~~v~~lv~~~~~ 121 (273)
T PLN02211 66 ----VTTFDEYNK-PLIDF---L-SSLPENEKVILVGHSAGGLSVTQAIHRFP--KKICLAVYVAAT 121 (273)
T ss_pred ----CCCHHHHHH-HHHHH---H-HhcCCCCCEEEEEECchHHHHHHHHHhCh--hheeEEEEeccc
Confidence 136665543 33333 3 333 3 79999999999999999999877 999999999774
No 44
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.92 E-value=2.2e-24 Score=185.09 Aligned_cols=99 Identities=19% Similarity=0.127 Sum_probs=78.1
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQH 160 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~ 160 (402)
+|+|||+||+++++..| +.++..| ++|+|+++|+||||.|+.... .++++++. | +..
T Consensus 2 ~p~vvllHG~~~~~~~w------~~~~~~l--~~~~vi~~D~~G~G~S~~~~~----------~~~~~~~~-~----l~~ 58 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW------QPVGEAL--PDYPRLYIDLPGHGGSAAISV----------DGFADVSR-L----LSQ 58 (242)
T ss_pred CCEEEEECCCCCChHHH------HHHHHHc--CCCCEEEecCCCCCCCCCccc----------cCHHHHHH-H----HHH
Confidence 56899999999999999 6677777 379999999999999975321 14555543 3 444
Q ss_pred HHHHhC-CcceEEecChhHHHHHHHhcCCCccc-ccchhhcccccc
Q 041488 161 VHDQTG-QKPHYVGHSLGTLIALASFSKDQPVN-KLRSAALLSPIA 204 (402)
Q Consensus 161 l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~-~v~~~v~~~p~~ 204 (402)
+.+.++ ++++++||||||.+++.++.++| + +|++++++++..
T Consensus 59 ~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~--~~~v~~lvl~~~~~ 102 (242)
T PRK11126 59 TLQSYNILPYWLVGYSLGGRIAMYYACQGL--AGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHcCCCCeEEEEECHHHHHHHHHHHhCC--cccccEEEEeCCCC
Confidence 445567 89999999999999999999875 4 599999987654
No 45
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.92 E-value=5.1e-24 Score=194.74 Aligned_cols=116 Identities=29% Similarity=0.403 Sum_probs=88.2
Q ss_pred CCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCc
Q 041488 60 DGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDS 139 (402)
Q Consensus 60 dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~ 139 (402)
+|..+++...+. +.+++|||+||++++...| ..+...|. .+|+|+++|+||||.|.....
T Consensus 117 ~~~~i~~~~~g~-------~~~~~vl~~HG~~~~~~~~------~~~~~~l~-~~~~v~~~d~~g~G~s~~~~~------ 176 (371)
T PRK14875 117 GGRTVRYLRLGE-------GDGTPVVLIHGFGGDLNNW------LFNHAALA-AGRPVIALDLPGHGASSKAVG------ 176 (371)
T ss_pred cCcEEEEecccC-------CCCCeEEEECCCCCccchH------HHHHHHHh-cCCEEEEEcCCCCCCCCCCCC------
Confidence 455666554433 2368999999999999998 56777774 569999999999999864221
Q ss_pred ccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 140 AFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 140 ~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
..+++++ .+.+..+.+.++ .+++++||||||.+++.++..+| ++++++|+++|...
T Consensus 177 ---~~~~~~~-----~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~--~~v~~lv~~~~~~~ 233 (371)
T PRK14875 177 ---AGSLDEL-----AAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAP--QRVASLTLIAPAGL 233 (371)
T ss_pred ---CCCHHHH-----HHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCc--hheeEEEEECcCCc
Confidence 1245444 344555566777 79999999999999999999877 89999999988643
No 46
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.91 E-value=4.2e-23 Score=188.11 Aligned_cols=244 Identities=14% Similarity=0.083 Sum_probs=150.6
Q ss_pred CCCcceEE-EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccc-cccccCCCCCCHHHHHHhCCCcEEeecCCCC
Q 041488 48 DDGICASV-VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDA-VTWLLLPPEQSLAFLLADNGYDVWLANTRGT 125 (402)
Q Consensus 48 ~~~~~~~~-~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~-~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~ 125 (402)
.+.+.+++ +++.||..+..+...+.. .++.|+||+.||+.+.. ..| ..++..|+++||+|+++|+||+
T Consensus 164 ~~~~~e~v~i~~~~g~~l~g~l~~P~~----~~~~P~Vli~gG~~~~~~~~~------~~~~~~La~~Gy~vl~~D~pG~ 233 (414)
T PRK05077 164 LPGELKELEFPIPGGGPITGFLHLPKG----DGPFPTVLVCGGLDSLQTDYY------RLFRDYLAPRGIAMLTIDMPSV 233 (414)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEECCC----CCCccEEEEeCCcccchhhhH------HHHHHHHHhCCCEEEEECCCCC
Confidence 34456666 888889778877653322 14466677666666543 345 4577789899999999999999
Q ss_pred cccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHh--C-CcceEEecChhHHHHHHHhcCCCcccccchhhcccc
Q 041488 126 KYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQT--G-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSP 202 (402)
Q Consensus 126 G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~--~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p 202 (402)
|.|.+... .. +... ...++++++.... + ++++++||||||.+++.++..+| ++|+++|+++|
T Consensus 234 G~s~~~~~-~~--------d~~~----~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p--~ri~a~V~~~~ 298 (414)
T PRK05077 234 GFSSKWKL-TQ--------DSSL----LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP--PRLKAVACLGP 298 (414)
T ss_pred CCCCCCCc-cc--------cHHH----HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC--cCceEEEEECC
Confidence 99975211 00 1111 2245677776653 4 68999999999999999999877 89999999988
Q ss_pred cccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccC
Q 041488 203 IAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHE 282 (402)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (402)
......................+...++...
T Consensus 299 ~~~~~~~~~~~~~~~p~~~~~~la~~lg~~~------------------------------------------------- 329 (414)
T PRK05077 299 VVHTLLTDPKRQQQVPEMYLDVLASRLGMHD------------------------------------------------- 329 (414)
T ss_pred ccchhhcchhhhhhchHHHHHHHHHHhCCCC-------------------------------------------------
Confidence 7531110000000000000000000000000
Q ss_pred CCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccC
Q 041488 283 PQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLND 362 (402)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~ 362 (402)
.....+... +. .+... ... . ...++ ++|+|+|+|++|.++|++.++.+.+..++
T Consensus 330 ---~~~~~l~~~---l~-----~~sl~----~~~--------~-l~~~i--~~PvLiI~G~~D~ivP~~~a~~l~~~~~~ 383 (414)
T PRK05077 330 ---ASDEALRVE---LN-----RYSLK----VQG--------L-LGRRC--PTPMLSGYWKNDPFSPEEDSRLIASSSAD 383 (414)
T ss_pred ---CChHHHHHH---hh-----hccch----hhh--------h-hccCC--CCcEEEEecCCCCCCCHHHHHHHHHhCCC
Confidence 000000000 00 00000 000 0 01356 79999999999999999999999888887
Q ss_pred CCCCceEEEECCCCCccceecccCcchhccHHHHHHHhcC
Q 041488 363 HEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 363 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 402 (402)
.+++++|++.|. +.++++.+.|.+||+++
T Consensus 384 -----~~l~~i~~~~~~------e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 384 -----GKLLEIPFKPVY------RNFDKALQEISDWLEDR 412 (414)
T ss_pred -----CeEEEccCCCcc------CCHHHHHHHHHHHHHHH
Confidence 889999987333 68899999999999863
No 47
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.91 E-value=2e-23 Score=189.68 Aligned_cols=135 Identities=24% Similarity=0.214 Sum_probs=88.6
Q ss_pred CCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCC-------CCCHH---HHHHhCCCcEEeecCCCC-ccc
Q 041488 60 DGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPP-------EQSLA---FLLADNGYDVWLANTRGT-KYS 128 (402)
Q Consensus 60 dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~-------~~~~~---~~l~~~g~~v~~~D~rG~-G~S 128 (402)
+|.+++|..++..+ .+.+|+|||+||++++...|..... ...++ ..|...+|+|+++|+||+ |.|
T Consensus 31 ~~~~~~y~~~G~~~----~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 31 PPVELAYETYGTLN----ADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGS 106 (379)
T ss_pred CCceEEEEeccccC----CCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCC
Confidence 44566777765421 1236899999999999986421100 01222 123357899999999983 555
Q ss_pred CCCCCCCCC-----CcccccccHHHHhhcchHHHHHHHHHHhC-Cc-ceEEecChhHHHHHHHhcCCCcccccchhhccc
Q 041488 129 RGHVSLSPD-----DSAFWDWTWDELVAYDLPATLQHVHDQTG-QK-PHYVGHSLGTLIALASFSKDQPVNKLRSAALLS 201 (402)
Q Consensus 129 ~~~~~~~~~-----~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~-~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~ 201 (402)
+++....+. ...+..|++++++. .+..++++++ ++ ++++||||||++++.++.++| ++|+++|+++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p--~~v~~lvl~~ 179 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVR-----AQARLLDALGITRLAAVVGGSMGGMQALEWAIDYP--DRVRSALVIA 179 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHH-----HHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhCh--HhhhEEEEEC
Confidence 443211111 11222456766653 4555566678 77 489999999999999999988 9999999998
Q ss_pred cccc
Q 041488 202 PIAY 205 (402)
Q Consensus 202 p~~~ 205 (402)
+...
T Consensus 180 ~~~~ 183 (379)
T PRK00175 180 SSAR 183 (379)
T ss_pred CCcc
Confidence 7653
No 48
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.91 E-value=2.3e-24 Score=182.84 Aligned_cols=101 Identities=28% Similarity=0.423 Sum_probs=81.4
Q ss_pred EEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHH
Q 041488 84 VFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHD 163 (402)
Q Consensus 84 vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~ 163 (402)
|||+||++++...| ..++..| ++||+|+++|+||+|.|..... +..+++++++. .+..+.+
T Consensus 1 vv~~hG~~~~~~~~------~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~-------~~~~~~~~~~~-----~l~~~l~ 61 (228)
T PF12697_consen 1 VVFLHGFGGSSESW------DPLAEAL-ARGYRVIAFDLPGHGRSDPPPD-------YSPYSIEDYAE-----DLAELLD 61 (228)
T ss_dssp EEEE-STTTTGGGG------HHHHHHH-HTTSEEEEEECTTSTTSSSHSS-------GSGGSHHHHHH-----HHHHHHH
T ss_pred eEEECCCCCCHHHH------HHHHHHH-hCCCEEEEEecCCccccccccc-------cCCcchhhhhh-----hhhhccc
Confidence 79999999999998 6788888 5899999999999999986331 12335555543 3444556
Q ss_pred HhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 164 QTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 164 ~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
.++ ++++++|||+||.+++.++.++| ++|+++|+++|...
T Consensus 62 ~~~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 62 ALGIKKVILVGHSMGGMIALRLAARYP--DRVKGLVLLSPPPP 102 (228)
T ss_dssp HTTTSSEEEEEETHHHHHHHHHHHHSG--GGEEEEEEESESSS
T ss_pred ccccccccccccccccccccccccccc--cccccceeeccccc
Confidence 666 79999999999999999999988 99999999999764
No 49
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.91 E-value=7.3e-23 Score=188.87 Aligned_cols=265 Identities=13% Similarity=0.134 Sum_probs=160.1
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQ 159 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~ 159 (402)
.++|||++||+......|+.. ++++++++|.++||+|+++|+||+|.|.+ .++++++..+++.+.++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~-p~~Slv~~L~~qGf~V~~iDwrgpg~s~~------------~~~~ddY~~~~i~~al~ 253 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLR-PQNSLVRWLVEQGHTVFVISWRNPDASQA------------DKTFDDYIRDGVIAALE 253 (532)
T ss_pred CCCcEEEECcccccceeeecc-cchHHHHHHHHCCcEEEEEECCCCCcccc------------cCChhhhHHHHHHHHHH
Confidence 578999999998877777543 34789999999999999999999998864 22566777778999999
Q ss_pred HHHHHhC-CcceEEecChhHHHHH----HHhcCC-CcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCC
Q 041488 160 HVHDQTG-QKPHYVGHSLGTLIAL----ASFSKD-QPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDE 233 (402)
Q Consensus 160 ~l~~~~~-~~~~lvGhS~Gg~~a~----~~a~~~-p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
.+++..+ ++++++||||||.++. .++..+ + ++|++++++++...+... ..+...+.......+........
T Consensus 254 ~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~--~rv~slvll~t~~Df~~~-G~l~~f~~~~~~~~~e~~~~~~G 330 (532)
T TIGR01838 254 VVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDD--KRIKSATFFTTLLDFSDP-GELGVFVDEEIVAGIERQNGGGG 330 (532)
T ss_pred HHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCC--CccceEEEEecCcCCCCc-chhhhhcCchhHHHHHHHHHhcC
Confidence 9999999 8999999999999862 244554 5 789999999887655433 22222211111222222222333
Q ss_pred CCCchHHHHHHHHHhhcCCCCchhhh-hhhhcCCCCCCCccccchhcccCCCcchHHHHHHHH-HHHhcCceeeecCCcc
Q 041488 234 FDPRGEAVVKLLKNICQKPGVDCTNL-LNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVA-QMIREGTIAMYDYNNK 311 (402)
Q Consensus 234 ~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 311 (402)
+.|... +...+..+ +.....+... ..++.+.... . ..+..|..+.+ .........+. ..+....+..-.+
T Consensus 331 ~lpg~~-m~~~F~~l-rp~~l~w~~~v~~yl~g~~~~-~-fdll~Wn~D~t-~lP~~~~~~~lr~ly~~N~L~~G~~--- 402 (532)
T TIGR01838 331 YLDGRQ-MAVTFSLL-RENDLIWNYYVDNYLKGKSPV-P-FDLLFWNSDST-NLPGKMHNFYLRNLYLQNALTTGGL--- 402 (532)
T ss_pred CCCHHH-HHHHHHhc-ChhhHHHHHHHHHHhcCCCcc-c-hhHHHHhccCc-cchHHHHHHHHHHHHhcCCCcCCee---
Confidence 445442 22222222 1111112211 1222222211 1 11222222111 11111111221 2222222211000
Q ss_pred chhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceec
Q 041488 312 EENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVM 383 (402)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 383 (402)
.. .....+|.+| ++|+|+++|++|.++|++.++.+.+.+++ .+..+++++||...+.
T Consensus 403 ----~v----~g~~~dL~~I--~vPvLvV~G~~D~IvP~~sa~~l~~~i~~-----~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 403 ----EV----CGVRLDLSKV--KVPVYIIATREDHIAPWQSAYRGAALLGG-----PKTFVLGESGHIAGVV 459 (532)
T ss_pred ----EE----CCEecchhhC--CCCEEEEeeCCCCcCCHHHHHHHHHHCCC-----CEEEEECCCCCchHhh
Confidence 00 0112358899 89999999999999999999999999987 6778899999996544
No 50
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.91 E-value=1.4e-23 Score=180.66 Aligned_cols=104 Identities=23% Similarity=0.310 Sum_probs=82.4
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQH 160 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~ 160 (402)
+++|||+||++++...| ..+...|+ +||+|+++|+||+|.|+...... .++++++.. .++..
T Consensus 1 ~~~vv~~hG~~~~~~~~------~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~-------~~~~~~~~~----~~~~~ 62 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADW------QALIELLG-PHFRCLAIDLPGHGSSQSPDEIE-------RYDFEEAAQ----DILAT 62 (251)
T ss_pred CCEEEEEcCCCCchhhH------HHHHHHhc-ccCeEEEEcCCCCCCCCCCCccC-------hhhHHHHHH----HHHHH
Confidence 36899999999999998 67888886 89999999999999997532111 224443322 22555
Q ss_pred HHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 161 VHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 161 l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
+.+.++ ++++++||||||.+++.++.++| ++|++++++++..
T Consensus 63 ~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~--~~v~~lil~~~~~ 105 (251)
T TIGR03695 63 LLDQLGIEPFFLVGYSMGGRIALYYALQYP--ERVQGLILESGSP 105 (251)
T ss_pred HHHHcCCCeEEEEEeccHHHHHHHHHHhCc--hheeeeEEecCCC
Confidence 666667 79999999999999999999988 8999999998764
No 51
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.90 E-value=8.9e-23 Score=158.70 Aligned_cols=240 Identities=17% Similarity=0.204 Sum_probs=168.8
Q ss_pred ccCCCcccCCCCCCCCcceEE-EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHH-HHHh
Q 041488 35 AKGHKAALAPAASDDGICASV-VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAF-LLAD 112 (402)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~-~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~-~l~~ 112 (402)
++++.+..+.++..+.|.+.. +.|.|..+++.+.+... .++|+++.+||..+|..... ..++ .+..
T Consensus 37 pqgsR~~vptP~~~n~pye~i~l~T~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmGhr~------~i~~~fy~~ 104 (300)
T KOG4391|consen 37 PQGSRENVPTPKEFNMPYERIELRTRDKVTLDAYLMLSE------SSRPTLLYFHANAGNMGHRL------PIARVFYVN 104 (300)
T ss_pred ccccccCCCCccccCCCceEEEEEcCcceeEeeeeeccc------CCCceEEEEccCCCcccchh------hHHHHHHHH
Confidence 344555666777888888888 99999999999888744 57899999999999987652 2333 3445
Q ss_pred CCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCC
Q 041488 113 NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQ 189 (402)
Q Consensus 113 ~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p 189 (402)
.+.+|+.+++||+|.|.+.+. ++.. .-|..++++++..+.. .++++.|.|+||++|...|+++.
T Consensus 105 l~mnv~ivsYRGYG~S~Gsps----E~GL---------~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~ 171 (300)
T KOG4391|consen 105 LKMNVLIVSYRGYGKSEGSPS----EEGL---------KLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNS 171 (300)
T ss_pred cCceEEEEEeeccccCCCCcc----ccce---------eccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccch
Confidence 689999999999999998432 2221 2288899999998765 58999999999999999999976
Q ss_pred cccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCC
Q 041488 190 PVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCC 269 (402)
Q Consensus 190 ~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (402)
+++.++|+-+........ . ..-+.| +..+....+|...
T Consensus 172 --~ri~~~ivENTF~SIp~~-----------~---------i~~v~p---~~~k~i~~lc~kn----------------- 209 (300)
T KOG4391|consen 172 --DRISAIIVENTFLSIPHM-----------A---------IPLVFP---FPMKYIPLLCYKN----------------- 209 (300)
T ss_pred --hheeeeeeechhccchhh-----------h---------hheecc---chhhHHHHHHHHh-----------------
Confidence 899999977654321100 0 000011 0001111111100
Q ss_pred CCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCC
Q 041488 270 LNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSD 349 (402)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~ 349 (402)
.|. .+ .+ +.+. .+|.|++.|..|.+||
T Consensus 210 -----------------------~~~---------S~---------~k----------i~~~--~~P~LFiSGlkDelVP 236 (300)
T KOG4391|consen 210 -----------------------KWL---------SY---------RK----------IGQC--RMPFLFISGLKDELVP 236 (300)
T ss_pred -----------------------hhc---------ch---------hh----------hccc--cCceEEeecCccccCC
Confidence 000 00 00 2222 6899999999999999
Q ss_pred hhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 350 VNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
|.+++.+++..+. ...++.++|++.|.+-. ..+..++.|.+||.+
T Consensus 237 P~~Mr~Ly~~c~S---~~Krl~eFP~gtHNDT~----i~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 237 PVMMRQLYELCPS---RTKRLAEFPDGTHNDTW----ICDGYFQAIEDFLAE 281 (300)
T ss_pred cHHHHHHHHhCch---hhhhheeCCCCccCceE----EeccHHHHHHHHHHH
Confidence 9999999999988 46789999999999633 345678888888853
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.90 E-value=2.1e-22 Score=174.82 Aligned_cols=126 Identities=19% Similarity=0.126 Sum_probs=89.3
Q ss_pred cCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCC
Q 041488 58 TKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPD 137 (402)
Q Consensus 58 ~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~ 137 (402)
..+|..+......+.+ ..+++||++||++.....+... ...+++.|+++||+|+++|+||||.|.+..
T Consensus 8 ~~~~~~l~g~~~~p~~-----~~~~~vv~i~gg~~~~~g~~~~--~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~----- 75 (274)
T TIGR03100 8 SCEGETLVGVLHIPGA-----SHTTGVLIVVGGPQYRVGSHRQ--FVLLARRLAEAGFPVLRFDYRGMGDSEGEN----- 75 (274)
T ss_pred EcCCcEEEEEEEcCCC-----CCCCeEEEEeCCccccCCchhH--HHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-----
Confidence 3445666655443332 3356788888766432211000 145788999999999999999999987521
Q ss_pred CcccccccHHHHhhcchHHHHHHHHHHh-C-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 138 DSAFWDWTWDELVAYDLPATLQHVHDQT-G-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 138 ~~~~~~~~~~~~~~~d~~~~v~~l~~~~-~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
.+++++ .+|+.++++++++.. + ++++++||||||.+++.++.. + .+|+++|+++|...
T Consensus 76 ------~~~~~~-~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~--~~v~~lil~~p~~~ 135 (274)
T TIGR03100 76 ------LGFEGI-DADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-D--LRVAGLVLLNPWVR 135 (274)
T ss_pred ------CCHHHH-HHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-C--CCccEEEEECCccC
Confidence 144444 348999999998775 4 789999999999999999765 3 68999999998643
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=99.89 E-value=1.1e-21 Score=190.36 Aligned_cols=124 Identities=22% Similarity=0.329 Sum_probs=90.0
Q ss_pred EEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC
Q 041488 54 SVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS 133 (402)
Q Consensus 54 ~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~ 133 (402)
+.+...||..++++.++.. .+++|||+||++++...| ..+...| ..||+|+++|+||||.|++...
T Consensus 5 ~~~~~~~g~~l~~~~~g~~-------~~~~ivllHG~~~~~~~w------~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~ 70 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP-------DRPTVVLVHGYPDNHEVW------DGVAPLL-ADRFRVVAYDVRGAGRSSAPKR 70 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC-------CCCeEEEEcCCCchHHHH------HHHHHHh-hcceEEEEecCCCCCCCCCCCc
Confidence 4466779999999877543 368999999999999999 6677778 6799999999999999985321
Q ss_pred CCCCCcccccccHHHHhhcchHHHHHHHHHHhCCcceEEecChhHHHHHHHhcCCCcccccchhhccc
Q 041488 134 LSPDDSAFWDWTWDELVAYDLPATLQHVHDQTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLS 201 (402)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~ 201 (402)
. ..+++++++. |+..+++.+. .+.+++++||||||.+++.++.+...+.++..++.++
T Consensus 71 ~-------~~~~~~~~a~-dl~~~i~~l~--~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 71 T-------AAYTLARLAD-DFAAVIDAVS--PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred c-------cccCHHHHHH-HHHHHHHHhC--CCCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 1 1346777755 5666655432 1145999999999999998887743234555544443
No 54
>PRK10566 esterase; Provisional
Probab=99.88 E-value=1.6e-21 Score=167.94 Aligned_cols=220 Identities=18% Similarity=0.249 Sum_probs=131.7
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
++.|+||++||++++...| ..++..|+++||+|+++|+||||.+..... ......+|. .-....+|+.+++
T Consensus 25 ~~~p~vv~~HG~~~~~~~~------~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 95 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVY------SYFAVALAQAGFRVIMPDAPMHGARFSGDE-ARRLNHFWQ--ILLQNMQEFPTLR 95 (249)
T ss_pred CCCCEEEEeCCCCcccchH------HHHHHHHHhCCCEEEEecCCcccccCCCcc-ccchhhHHH--HHHHHHHHHHHHH
Confidence 4468999999999988777 678889999999999999999997632110 000011111 1112234677778
Q ss_pred HHHHHHh--C-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCC
Q 041488 159 QHVHDQT--G-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFD 235 (402)
Q Consensus 159 ~~l~~~~--~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (402)
+++.+.. + ++++++||||||.+++.++.++| + +.+.+.+.+.... ... .. ..+. .. .
T Consensus 96 ~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~--~-~~~~~~~~~~~~~----~~~----~~-------~~~~-~~-~ 155 (249)
T PRK10566 96 AAIREEGWLLDDRLAVGGASMGGMTALGIMARHP--W-VKCVASLMGSGYF----TSL----AR-------TLFP-PL-I 155 (249)
T ss_pred HHHHhcCCcCccceeEEeecccHHHHHHHHHhCC--C-eeEEEEeeCcHHH----HHH----HH-------Hhcc-cc-c
Confidence 8887663 3 68999999999999999988865 4 3333322221110 000 00 0000 00 0
Q ss_pred CchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhh
Q 041488 236 PRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENK 315 (402)
Q Consensus 236 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (402)
+... . ............ ..++.
T Consensus 156 ~~~~--------------------------------------------~--~~~~~~~~~~~~-----~~~~~------- 177 (249)
T PRK10566 156 PETA--------------------------------------------A--QQAEFNNIVAPL-----AEWEV------- 177 (249)
T ss_pred cccc--------------------------------------------c--cHHHHHHHHHHH-----hhcCh-------
Confidence 0000 0 000000000000 00000
Q ss_pred cccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCC-ceEEEECCCCCccceecccCcchhccHH
Q 041488 316 KHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGD-KLVVQYRQDYAHADYVMGENAGQVLYEP 394 (402)
Q Consensus 316 ~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 394 (402)
...+.++. ++|+|+++|++|.++|++.++.+++.++.+... ..+++.++++||. +. .+..+.
T Consensus 178 ---------~~~~~~i~-~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~---~~----~~~~~~ 240 (249)
T PRK10566 178 ---------THQLEQLA-DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHR---IT----PEALDA 240 (249)
T ss_pred ---------hhhhhhcC-CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCc---cC----HHHHHH
Confidence 00122331 479999999999999999999999988764332 4688899999998 22 346899
Q ss_pred HHHHHhcC
Q 041488 395 LMAFFKLQ 402 (402)
Q Consensus 395 i~~fl~~~ 402 (402)
+.+||+++
T Consensus 241 ~~~fl~~~ 248 (249)
T PRK10566 241 GVAFFRQH 248 (249)
T ss_pred HHHHHHhh
Confidence 99999864
No 55
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.88 E-value=2.6e-21 Score=195.92 Aligned_cols=281 Identities=17% Similarity=0.213 Sum_probs=159.5
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
..++||||+||+..+...|.... .+++...|.++||+|+++|+ |.|+... .+..+++.++.. ++.+.+
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~-~~s~v~~L~~~g~~v~~~d~---G~~~~~~-------~~~~~~l~~~i~-~l~~~l 132 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTR-DDGAVGILHRAGLDPWVIDF---GSPDKVE-------GGMERNLADHVV-ALSEAI 132 (994)
T ss_pred CCCCcEEEECCCCCCccceecCC-cccHHHHHHHCCCEEEEEcC---CCCChhH-------cCccCCHHHHHH-HHHHHH
Confidence 35789999999999999996543 36788999999999999995 5555321 111346776653 566666
Q ss_pred HHHHHHhCCcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCC---chh--HHHHhhhhhHHHHHHHhcCCC
Q 041488 159 QHVHDQTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQM---TSP--LAKNAADNFLAEALYWLGLDE 233 (402)
Q Consensus 159 ~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~ 233 (402)
+.+++..+++++++||||||++++.+++.++ +++|+++|++++....... ..+ ............+.. . .
T Consensus 133 ~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~-~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~ 207 (994)
T PRK07868 133 DTVKDVTGRDVHLVGYSQGGMFCYQAAAYRR-SKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFN---R-L 207 (994)
T ss_pred HHHHHhhCCceEEEEEChhHHHHHHHHHhcC-CCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhh---c-C
Confidence 6666555578999999999999999887543 1689999988776543211 000 000000000000000 0 0
Q ss_pred CCCchHHHHHHHHHhhcCCCC--chhhhhhhhcCCCCCCCccccchhcccC-----CCcchHHHHHHHHHHHh-cCcee-
Q 041488 234 FDPRGEAVVKLLKNICQKPGV--DCTNLLNSFTGQNCCLNSSIVDVFLEHE-----PQATSTKNMIHVAQMIR-EGTIA- 304 (402)
Q Consensus 234 ~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~- 304 (402)
..|.. +...... +...... ....+...+.+.....+.+....+.... +.. ....+...+. .....
T Consensus 208 ~~p~~-~~~~~~~-~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~----~~~~~~~~~~~~n~~~~ 281 (994)
T PRK07868 208 DIPGW-MARTGFQ-MLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGP----AISELLKQFIAHNRMMT 281 (994)
T ss_pred CCCHH-HHHHHHH-hcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchH----HHHHHHHHHHHhCcccC
Confidence 11111 0000000 0000000 0001111111111111111111111111 110 1111111111 00000
Q ss_pred -eecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEE-EECCCCCcccee
Q 041488 305 -MYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVV-QYRQDYAHADYV 382 (402)
Q Consensus 305 -~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~ 382 (402)
.+... ....+|.+| ++|+|+|+|++|.++|++.++.+.+.+++ .++ .+++++||++++
T Consensus 282 g~~~~~-------------~~~~~L~~i--~~P~L~i~G~~D~ivp~~~~~~l~~~i~~-----a~~~~~~~~~GH~g~~ 341 (994)
T PRK07868 282 GGFAIN-------------GQMVTLADI--TCPVLAFVGEVDDIGQPASVRGIRRAAPN-----AEVYESLIRAGHFGLV 341 (994)
T ss_pred ceEEEC-------------CEEcchhhC--CCCEEEEEeCCCCCCCHHHHHHHHHhCCC-----CeEEEEeCCCCCEeee
Confidence 00000 011237888 89999999999999999999999999988 665 678999999999
Q ss_pred cccCcchhccHHHHHHHhcC
Q 041488 383 MGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 383 ~~~~~~~~~~~~i~~fl~~~ 402 (402)
.....+++++..|.+||.++
T Consensus 342 ~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 342 VGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred echhhhhhhChHHHHHHHHh
Confidence 99999999999999999853
No 56
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.87 E-value=1.7e-21 Score=203.82 Aligned_cols=110 Identities=17% Similarity=0.169 Sum_probs=82.5
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQ 159 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~ 159 (402)
.+++|||+||++++...| ..++..|. .+|+|+++|+||||.|....... ....-..+++++++. .+.
T Consensus 1370 ~~~~vVllHG~~~s~~~w------~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~-~~~~~~~~si~~~a~-----~l~ 1436 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDW------IPIMKAIS-GSARCISIDLPGHGGSKIQNHAK-ETQTEPTLSVELVAD-----LLY 1436 (1655)
T ss_pred CCCeEEEECCCCCCHHHH------HHHHHHHh-CCCEEEEEcCCCCCCCCCccccc-cccccccCCHHHHHH-----HHH
Confidence 467999999999999999 66777774 57999999999999997532100 000111235555543 344
Q ss_pred HHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 160 HVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 160 ~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
.+.++++ ++++++||||||.+++.++.++| ++|+++|++++..
T Consensus 1437 ~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P--~~V~~lVlis~~p 1480 (1655)
T PLN02980 1437 KLIEHITPGKVTLVGYSMGARIALYMALRFS--DKIEGAVIISGSP 1480 (1655)
T ss_pred HHHHHhCCCCEEEEEECHHHHHHHHHHHhCh--HhhCEEEEECCCC
Confidence 4455566 89999999999999999999988 9999999998754
No 57
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=1.6e-21 Score=157.94 Aligned_cols=213 Identities=19% Similarity=0.209 Sum_probs=150.9
Q ss_pred cceEE-EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHh-CCCcEEeecCCCCccc
Q 041488 51 ICASV-VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLAD-NGYDVWLANTRGTKYS 128 (402)
Q Consensus 51 ~~~~~-~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~D~rG~G~S 128 (402)
..+.+ +++..|..+....+.+.+ ...+++|+.||........ ..+-..|.. -+++|+.+|++|+|.|
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~-----~~~~~lly~hGNa~Dlgq~------~~~~~~l~~~ln~nv~~~DYSGyG~S 102 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE-----AAHPTLLYSHGNAADLGQM------VELFKELSIFLNCNVVSYDYSGYGRS 102 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc-----ccceEEEEcCCcccchHHH------HHHHHHHhhcccceEEEEeccccccc
Confidence 33444 778888888877776654 3468999999985544422 122222322 3899999999999999
Q ss_pred CCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccc
Q 041488 129 RGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYV 206 (402)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~ 206 (402)
.+..... .. .+|+.++.+++++.+| ++++|+|+|+|...+..+|++.| ++++|+.+|....
T Consensus 103 ~G~psE~-----------n~--y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~ 165 (258)
T KOG1552|consen 103 SGKPSER-----------NL--YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSG 165 (258)
T ss_pred CCCcccc-----------cc--hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEeccchhh
Confidence 9844311 11 3499999999999996 89999999999999999999963 8999999987532
Q ss_pred cCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcc
Q 041488 207 GQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQAT 286 (402)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (402)
.+... +... ...
T Consensus 166 ~rv~~------------------------~~~~-----------------------------------~~~--------- 177 (258)
T KOG1552|consen 166 MRVAF------------------------PDTK-----------------------------------TTY--------- 177 (258)
T ss_pred hhhhc------------------------cCcc-----------------------------------eEE---------
Confidence 21100 0000 000
Q ss_pred hHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCC
Q 041488 287 STKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGD 366 (402)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~ 366 (402)
| +..+- + ...++.| ++|+|++||++|.++|...+..+++..++
T Consensus 178 -------~--------~d~f~------~----------i~kI~~i--~~PVLiiHgtdDevv~~sHg~~Lye~~k~---- 220 (258)
T KOG1552|consen 178 -------C--------FDAFP------N----------IEKISKI--TCPVLIIHGTDDEVVDFSHGKALYERCKE---- 220 (258)
T ss_pred -------e--------ecccc------c----------cCcceec--cCCEEEEecccCceecccccHHHHHhccc----
Confidence 0 00000 0 1115677 89999999999999999999999999988
Q ss_pred ceEEEECCCCCccceecccCcchhccHHHHHHHh
Q 041488 367 KLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 400 (402)
Q Consensus 367 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~ 400 (402)
+.+-.++.++||.+ .+...++.+.+..|+.
T Consensus 221 ~~epl~v~g~gH~~----~~~~~~yi~~l~~f~~ 250 (258)
T KOG1552|consen 221 KVEPLWVKGAGHND----IELYPEYIEHLRRFIS 250 (258)
T ss_pred cCCCcEEecCCCcc----cccCHHHHHHHHHHHH
Confidence 56888899999994 4566677888887764
No 58
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.86 E-value=1e-20 Score=159.16 Aligned_cols=256 Identities=16% Similarity=0.171 Sum_probs=154.9
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHh-CCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLAD-NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
...|+++++||+.++...| ++++..|+. .+..|++.|.|.||.|...... +++.++. |+..+
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw------~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h----------~~~~ma~-dv~~F 112 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENW------RSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH----------NYEAMAE-DVKLF 112 (315)
T ss_pred CCCCceEEecccccCCCCH------HHHHHHhcccccCceEEEecccCCCCcccccc----------CHHHHHH-HHHHH
Confidence 4689999999999999999 889999975 4789999999999998764332 5666754 88888
Q ss_pred HHHHHHHhC-CcceEEecChhH-HHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCC-
Q 041488 158 LQHVHDQTG-QKPHYVGHSLGT-LIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEF- 234 (402)
Q Consensus 158 v~~l~~~~~-~~~~lvGhS~Gg-~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (402)
++.+...+. .+++++|||||| .+++..+...| ..+..+|+++-.+.... ...... ...++........
T Consensus 113 i~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p--~~~~rliv~D~sP~~~~--~~~~e~-----~e~i~~m~~~d~~~ 183 (315)
T KOG2382|consen 113 IDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKP--DLIERLIVEDISPGGVG--RSYGEY-----RELIKAMIQLDLSI 183 (315)
T ss_pred HHHcccccccCCceecccCcchHHHHHHHHHhcC--cccceeEEEecCCccCC--cccchH-----HHHHHHHHhccccc
Confidence 888876656 799999999999 66666777767 88888888765442111 111100 0111111111111
Q ss_pred --CCch-HHHHHHHHHhhcCCCCchhhhh-hhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCc
Q 041488 235 --DPRG-EAVVKLLKNICQKPGVDCTNLL-NSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNN 310 (402)
Q Consensus 235 --~p~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (402)
.+.. ...+.+..-..+. ....+. ..+. +..+. ..+....+ ...+. +.+.... ...+.
T Consensus 184 ~~~~~rke~~~~l~~~~~d~---~~~~fi~~nl~---~~~~~---~s~~w~~n----l~~i~---~~~~~~~--~~s~~- 244 (315)
T KOG2382|consen 184 GVSRGRKEALKSLIEVGFDN---LVRQFILTNLK---KSPSD---GSFLWRVN----LDSIA---SLLDEYE--ILSYW- 244 (315)
T ss_pred cccccHHHHHHHHHHHhcch---HHHHHHHHhcC---cCCCC---CceEEEeC----HHHHH---HHHHHHH--hhccc-
Confidence 1111 2222222211100 011110 1100 00000 00000000 01111 1111100 00000
Q ss_pred cchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchh
Q 041488 311 KEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQV 390 (402)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 390 (402)
.++.+-+.+.|||++.|.++..++.+.-.++.+.+++ +++++++++||+ .+.|.|++
T Consensus 245 ---------------~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~-----~e~~~ld~aGHw---Vh~E~P~~ 301 (315)
T KOG2382|consen 245 ---------------ADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN-----VEVHELDEAGHW---VHLEKPEE 301 (315)
T ss_pred ---------------ccccccccccceeEEecCCCCCcChhHHHHHHHhccc-----hheeecccCCce---eecCCHHH
Confidence 0111111168999999999999999988999999998 999999999999 68999999
Q ss_pred ccHHHHHHHhcC
Q 041488 391 LYEPLMAFFKLQ 402 (402)
Q Consensus 391 ~~~~i~~fl~~~ 402 (402)
+.+.|.+|++++
T Consensus 302 ~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 302 FIESISEFLEEP 313 (315)
T ss_pred HHHHHHHHhccc
Confidence 999999999753
No 59
>PRK11071 esterase YqiA; Provisional
Probab=99.86 E-value=6.8e-21 Score=155.21 Aligned_cols=89 Identities=18% Similarity=0.111 Sum_probs=69.6
Q ss_pred CcEEEecCccccccccccCCCCCCHHHHHHh--CCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHH
Q 041488 82 LPVFLQHGLLMDAVTWLLLPPEQSLAFLLAD--NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQ 159 (402)
Q Consensus 82 ~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~--~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~ 159 (402)
|+|||+||++++...|.. ..+...+.+ .+|+|+++|+||+|. +..+.++
T Consensus 2 p~illlHGf~ss~~~~~~----~~~~~~l~~~~~~~~v~~~dl~g~~~-------------------------~~~~~l~ 52 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKA----TLLKNWLAQHHPDIEMIVPQLPPYPA-------------------------DAAELLE 52 (190)
T ss_pred CeEEEECCCCCCcchHHH----HHHHHHHHHhCCCCeEEeCCCCCCHH-------------------------HHHHHHH
Confidence 579999999999999832 234566654 379999999999851 3445566
Q ss_pred HHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 160 HVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 160 ~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
.+.++++ ++++++||||||.+++.++.++| . .+|+++|..
T Consensus 53 ~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~--~---~~vl~~~~~ 93 (190)
T PRK11071 53 SLVLEHGGDPLGLVGSSLGGYYATWLSQCFM--L---PAVVVNPAV 93 (190)
T ss_pred HHHHHcCCCCeEEEEECHHHHHHHHHHHHcC--C---CEEEECCCC
Confidence 7777777 89999999999999999999876 3 357788764
No 60
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.85 E-value=2.9e-20 Score=155.80 Aligned_cols=281 Identities=15% Similarity=0.133 Sum_probs=156.4
Q ss_pred EEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCC
Q 041488 55 VVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSL 134 (402)
Q Consensus 55 ~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~ 134 (402)
.+.+.||..+.....-.+ .+..+|.||++||+.+++.+-+. +.+++.+.++||.|+++|+||+|.+.-....
T Consensus 53 ~v~~pdg~~~~ldw~~~p----~~~~~P~vVl~HGL~G~s~s~y~----r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~ 124 (345)
T COG0429 53 RLETPDGGFIDLDWSEDP----RAAKKPLVVLFHGLEGSSNSPYA----RGLMRALSRRGWLVVVFHFRGCSGEANTSPR 124 (345)
T ss_pred EEEcCCCCEEEEeeccCc----cccCCceEEEEeccCCCCcCHHH----HHHHHHHHhcCCeEEEEecccccCCcccCcc
Confidence 477777765554444322 12557899999999998886554 6788899999999999999999987642211
Q ss_pred CCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhH
Q 041488 135 SPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPL 213 (402)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~ 213 (402)
-| +..+ ..|+..+++++++..+ .++..+|.|+||.....|..+......+++.+.++...........+
T Consensus 125 -----~y---h~G~--t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l 194 (345)
T COG0429 125 -----LY---HSGE--TEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRL 194 (345)
T ss_pred -----ee---cccc--hhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHh
Confidence 11 1111 2489999999999877 89999999999966666655532223566666555433211000000
Q ss_pred HHHhh-hhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHH
Q 041488 214 AKNAA-DNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMI 292 (402)
Q Consensus 214 ~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (402)
..-.. ..+ ...+.+.+......+ +..+....+. .....+.
T Consensus 195 ~~~~s~~ly---------------~r~l~~~L~~~~~~k-----------------------l~~l~~~~p~-~~~~~ik 235 (345)
T COG0429 195 DSGFSLRLY---------------SRYLLRNLKRNAARK-----------------------LKELEPSLPG-TVLAAIK 235 (345)
T ss_pred cCchhhhhh---------------HHHHHHHHHHHHHHH-----------------------HHhcCcccCc-HHHHHHH
Confidence 00000 000 000001111100000 0000000000 0000000
Q ss_pred HHHHHHh-cCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHH-HccCCCCCceEE
Q 041488 293 HVAQMIR-EGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLE-SLNDHEGDKLVV 370 (402)
Q Consensus 293 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~-~~~~~~~~~~~~ 370 (402)
.+..... ...+...-++. .+...|.+..+....|++| .+|+|||++.+|++++++..-+... ..+ .+.+
T Consensus 236 ~~~ti~eFD~~~Tap~~Gf--~da~dYYr~aSs~~~L~~I--r~PtLii~A~DDP~~~~~~iP~~~~~~np-----~v~l 306 (345)
T COG0429 236 RCRTIREFDDLLTAPLHGF--ADAEDYYRQASSLPLLPKI--RKPTLIINAKDDPFMPPEVIPKLQEMLNP-----NVLL 306 (345)
T ss_pred hhchHHhccceeeecccCC--CcHHHHHHhcccccccccc--ccceEEEecCCCCCCChhhCCcchhcCCC-----ceEE
Confidence 0000000 01111111111 1334444444445559999 8999999999999999976655554 334 4899
Q ss_pred EECCCCCccceecccC-cch-hccHHHHHHHhc
Q 041488 371 QYRQDYAHADYVMGEN-AGQ-VLYEPLMAFFKL 401 (402)
Q Consensus 371 ~~~~~~gH~~~~~~~~-~~~-~~~~~i~~fl~~ 401 (402)
..-+.+||.+|+-... ++. ...+.+.+|++.
T Consensus 307 ~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 307 QLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred EeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 9999999999876333 332 566788888864
No 61
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.85 E-value=2.3e-20 Score=162.34 Aligned_cols=132 Identities=20% Similarity=0.217 Sum_probs=98.5
Q ss_pred EEcCCCcEEEEEEecCCCCC--CCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSG--GEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS 133 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~--~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~ 133 (402)
++++||-.+.+...-..... .+.+..|.||++||..+++..=+. +.++..+.+.||+|++++.||+|.|.-...
T Consensus 98 i~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YV----r~lv~~a~~~G~r~VVfN~RG~~g~~LtTp 173 (409)
T KOG1838|consen 98 IKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYV----RHLVHEAQRKGYRVVVFNHRGLGGSKLTTP 173 (409)
T ss_pred EEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHH----HHHHHHHHhCCcEEEEECCCCCCCCccCCC
Confidence 88999999888777443211 113457999999999998876444 678888889999999999999998863221
Q ss_pred CCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccc
Q 041488 134 LSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLS 201 (402)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~ 201 (402)
. - |+... .+|+..++++++++++ .+++.+|.||||.+...|+.+......+.+.+.++
T Consensus 174 ---r--~---f~ag~--t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~ 232 (409)
T KOG1838|consen 174 ---R--L---FTAGW--TEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVC 232 (409)
T ss_pred ---c--e---eecCC--HHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEe
Confidence 1 1 12221 3499999999999999 89999999999999999998743333455555444
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.84 E-value=4.3e-21 Score=150.90 Aligned_cols=143 Identities=27% Similarity=0.353 Sum_probs=114.7
Q ss_pred cEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHH
Q 041488 83 PVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVH 162 (402)
Q Consensus 83 ~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~ 162 (402)
+||++||++.+...| ..+++.|+++||.|+++|+||+|.+.. ..++..+++.+.
T Consensus 1 ~vv~~HG~~~~~~~~------~~~~~~l~~~G~~v~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY------QPLAEALAEQGYAVVAFDYPGHGDSDG--------------------ADAVERVLADIR 54 (145)
T ss_dssp EEEEECTTTTTTHHH------HHHHHHHHHTTEEEEEESCTTSTTSHH--------------------SHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHH------HHHHHHHHHCCCEEEEEecCCCCccch--------------------hHHHHHHHHHHH
Confidence 589999999998887 689999999999999999999997742 125556666664
Q ss_pred HH-hC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHH
Q 041488 163 DQ-TG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEA 240 (402)
Q Consensus 163 ~~-~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 240 (402)
+. .+ ++++++|||+||.+++.++.+. .+++++|+++|... . ..
T Consensus 55 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~---~~v~~~v~~~~~~~---~--------~~--------------------- 99 (145)
T PF12695_consen 55 AGYPDPDRIILIGHSMGGAIAANLAARN---PRVKAVVLLSPYPD---S--------ED--------------------- 99 (145)
T ss_dssp HHHCTCCEEEEEEETHHHHHHHHHHHHS---TTESEEEEESESSG---C--------HH---------------------
T ss_pred hhcCCCCcEEEEEEccCcHHHHHHhhhc---cceeEEEEecCccc---h--------hh---------------------
Confidence 43 25 8999999999999999999874 78999999998210 0 00
Q ss_pred HHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCC
Q 041488 241 VVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQ 320 (402)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (402)
T Consensus 100 -------------------------------------------------------------------------------- 99 (145)
T PF12695_consen 100 -------------------------------------------------------------------------------- 99 (145)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCcc
Q 041488 321 PNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHA 379 (402)
Q Consensus 321 ~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 379 (402)
+.+. ++|+++++|+.|.+++++..+++++.++. +.++.++++++|+
T Consensus 100 -------~~~~--~~pv~~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 -------LAKI--RIPVLFIHGENDPLVPPEQVRRLYEALPG----PKELYIIPGAGHF 145 (145)
T ss_dssp -------HTTT--TSEEEEEEETT-SSSHHHHHHHHHHHHCS----SEEEEEETTS-TT
T ss_pred -------hhcc--CCcEEEEEECCCCcCCHHHHHHHHHHcCC----CcEEEEeCCCcCc
Confidence 1122 68999999999999999999999999985 5899999999995
No 63
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.84 E-value=1.3e-20 Score=145.15 Aligned_cols=246 Identities=15% Similarity=0.150 Sum_probs=156.1
Q ss_pred cCCCcEEEEEEecCCCCCCCCCCCCcEEEecCcccccc-ccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCC
Q 041488 58 TKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAV-TWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSP 136 (402)
Q Consensus 58 ~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~-~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~ 136 (402)
..+|..|.|...+.+ ...||++.|..++.. .|-+ .+....-...+.|++.|.||+|.|..+..
T Consensus 27 ~vng~ql~y~~~G~G--------~~~iLlipGalGs~~tDf~p-----ql~~l~k~l~~TivawDPpGYG~SrPP~R--- 90 (277)
T KOG2984|consen 27 HVNGTQLGYCKYGHG--------PNYILLIPGALGSYKTDFPP-----QLLSLFKPLQVTIVAWDPPGYGTSRPPER--- 90 (277)
T ss_pred eecCceeeeeecCCC--------CceeEecccccccccccCCH-----HHHhcCCCCceEEEEECCCCCCCCCCCcc---
Confidence 447888888777655 347999999777665 4522 22222222349999999999999986433
Q ss_pred CCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHH
Q 041488 137 DDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAK 215 (402)
Q Consensus 137 ~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~ 215 (402)
.+..+-+ .+|...+++-. +.+. +++.++|||=||..++..|++++ +.|.++|+.+...+.........+
T Consensus 91 ------kf~~~ff-~~Da~~avdLM-~aLk~~~fsvlGWSdGgiTalivAak~~--e~v~rmiiwga~ayvn~~~~ma~k 160 (277)
T KOG2984|consen 91 ------KFEVQFF-MKDAEYAVDLM-EALKLEPFSVLGWSDGGITALIVAAKGK--EKVNRMIIWGAAAYVNHLGAMAFK 160 (277)
T ss_pred ------cchHHHH-HHhHHHHHHHH-HHhCCCCeeEeeecCCCeEEEEeeccCh--hhhhhheeecccceecchhHHHHh
Confidence 1233333 44777777654 4556 89999999999999999999988 999999999887765443222211
Q ss_pred HhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHH
Q 041488 216 NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVA 295 (402)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (402)
- ++....+.....- | +............+..|.
T Consensus 161 g-----iRdv~kWs~r~R~-P-----------------------------------------~e~~Yg~e~f~~~wa~wv 193 (277)
T KOG2984|consen 161 G-----IRDVNKWSARGRQ-P-----------------------------------------YEDHYGPETFRTQWAAWV 193 (277)
T ss_pred c-----hHHHhhhhhhhcc-h-----------------------------------------HHHhcCHHHHHHHHHHHH
Confidence 1 1111111100000 0 000000000011122222
Q ss_pred HHHhc-CceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECC
Q 041488 296 QMIRE-GTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQ 374 (402)
Q Consensus 296 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (402)
..... ..+..-++. ...+.++ +||+||+||+.|++++-..+-.+....+. +++.+.|
T Consensus 194 D~v~qf~~~~dG~fC---------------r~~lp~v--kcPtli~hG~kDp~~~~~hv~fi~~~~~~-----a~~~~~p 251 (277)
T KOG2984|consen 194 DVVDQFHSFCDGRFC---------------RLVLPQV--KCPTLIMHGGKDPFCGDPHVCFIPVLKSL-----AKVEIHP 251 (277)
T ss_pred HHHHHHhhcCCCchH---------------hhhcccc--cCCeeEeeCCcCCCCCCCCccchhhhccc-----ceEEEcc
Confidence 11110 001111110 1127788 89999999999999998888888888887 8999999
Q ss_pred CCCccceecccCcchhccHHHHHHHhc
Q 041488 375 DYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 375 ~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
+++|. ++...+++|+..+++||++
T Consensus 252 eGkHn---~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 252 EGKHN---FHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred CCCcc---eeeechHHHHHHHHHHHhc
Confidence 99998 6889999999999999986
No 64
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=9.3e-20 Score=164.11 Aligned_cols=314 Identities=11% Similarity=0.074 Sum_probs=158.0
Q ss_pred EEcCCC-----cEEEEEEecCCCCCCCCCCCCcEEEecCccccccc------------cccCCCCCCHHHHHHhCCCcEE
Q 041488 56 VTTKDG-----YILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVT------------WLLLPPEQSLAFLLADNGYDVW 118 (402)
Q Consensus 56 ~~~~dG-----~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~------------~~~~~~~~~~~~~l~~~g~~v~ 118 (402)
++.+.| .+|+|..++.-+ ....++||+.|++++++.. |....- --.+.|.-..|-||
T Consensus 30 f~l~~G~~l~~~~~~Y~t~G~ln----~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~i--G~g~~lDt~~yfvi 103 (389)
T PRK06765 30 FTTEGGRTIPDVQMGYETYGTLN----RAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLI--GPGKAIDTNKYFVI 103 (389)
T ss_pred EEccCCCCcCCceEEEEeccccC----CCCCCEEEEeCCCCCchhhcccccccCCCcccHHhcc--CCCCCcCCCceEEE
Confidence 455555 466777776532 1346899999999986532 211110 01112333569999
Q ss_pred eecCCCCcccC-------CCCCCCCCC-----cccccccHHHHhhcchHHHHHHHHHHhC-Ccce-EEecChhHHHHHHH
Q 041488 119 LANTRGTKYSR-------GHVSLSPDD-----SAFWDWTWDELVAYDLPATLQHVHDQTG-QKPH-YVGHSLGTLIALAS 184 (402)
Q Consensus 119 ~~D~rG~G~S~-------~~~~~~~~~-----~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~-lvGhS~Gg~~a~~~ 184 (402)
++|..|-|.|. ++...+|.. ..|..+++.++ .+.+..++++++ +++. ++||||||++++.+
T Consensus 104 ~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~-----~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~ 178 (389)
T PRK06765 104 STDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDF-----VRVQKELIKSLGIARLHAVMGPSMGGMQAQEW 178 (389)
T ss_pred EecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHH-----HHHHHHHHHHcCCCCceEEEEECHHHHHHHHH
Confidence 99999988643 323322321 12334555555 445666667788 8886 99999999999999
Q ss_pred hcCCCcccccchhhcccccccccCCc-hhHHHHhhhhhHHHHHH--HhcCCCCC----Cch--HHHHHHHHHhhcCCCCc
Q 041488 185 FSKDQPVNKLRSAALLSPIAYVGQMT-SPLAKNAADNFLAEALY--WLGLDEFD----PRG--EAVVKLLKNICQKPGVD 255 (402)
Q Consensus 185 a~~~p~~~~v~~~v~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~----p~~--~~~~~~~~~~~~~~~~~ 255 (402)
+.++| ++|+++|+++......... ...... ....+.. .+....+. |.. ...+.+.. .+....
T Consensus 179 a~~~P--~~v~~lv~ia~~~~~~~~~~~~~~~~----~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~-~~~~s~-- 249 (389)
T PRK06765 179 AVHYP--HMVERMIGVIGNPQNDAWTSVNVLQN----WAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMT-MNAFDE-- 249 (389)
T ss_pred HHHCh--HhhheEEEEecCCCCChhHHHHHHHH----HHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHH-HHcCCH--
Confidence 99988 9999999998765432211 001000 0000100 00011110 111 00111111 111000
Q ss_pred hhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCC---CCCCCCCCCCC
Q 041488 256 CTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQP---NPPLYNMTSIP 332 (402)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~ 332 (402)
..+..-.+......... .. ......+...+...........+...++-.+.+.+..+... ......|.+|
T Consensus 250 --~~~~~~f~r~~~~~~~~---~~-~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I- 322 (389)
T PRK06765 250 --HFYETTFPRNASIEVDP---YE-KVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNI- 322 (389)
T ss_pred --HHHHHHcCcCccccccc---cc-cccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcC-
Confidence 00000000000000000 00 00000000011000000000001100010000011111000 0011236678
Q ss_pred CCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCC-CCccceecccCcchhccHHHHHHHhc
Q 041488 333 HDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQD-YAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 333 ~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
++|+|+|+|+.|.++|++.++++.+.+++.. .+++++++++ +||.. +.+.++++.+.|.+||++
T Consensus 323 -~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~-~~a~l~~I~s~~GH~~---~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 323 -EANVLMIPCKQDLLQPPRYNYKMVDILQKQG-KYAEVYEIESINGHMA---GVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred -CCCEEEEEeCCCCCCCHHHHHHHHHHhhhcC-CCeEEEEECCCCCcch---hhcCHHHHHHHHHHHHcc
Confidence 8999999999999999999999999997321 1388999985 99995 558999999999999975
No 65
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.82 E-value=1.9e-18 Score=157.72 Aligned_cols=267 Identities=15% Similarity=0.113 Sum_probs=162.3
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
..+.|||+++++-.....++.. ++++++++|.++||.|+++||++-+.+++ .+++++|.. .+.+++
T Consensus 213 v~~~PLLIVPp~INK~YIlDL~-P~~SlVr~lv~qG~~VflIsW~nP~~~~r------------~~~ldDYv~-~i~~Al 278 (560)
T TIGR01839 213 QHARPLLVVPPQINKFYIFDLS-PEKSFVQYCLKNQLQVFIISWRNPDKAHR------------EWGLSTYVD-ALKEAV 278 (560)
T ss_pred cCCCcEEEechhhhhhheeecC-CcchHHHHHHHcCCeEEEEeCCCCChhhc------------CCCHHHHHH-HHHHHH
Confidence 4478999999999666666543 56899999999999999999999776654 458999985 899999
Q ss_pred HHHHHHhC-CcceEEecChhHHHHHH----HhcCCCccc-ccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCC
Q 041488 159 QHVHDQTG-QKPHYVGHSLGTLIALA----SFSKDQPVN-KLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLD 232 (402)
Q Consensus 159 ~~l~~~~~-~~~~lvGhS~Gg~~a~~----~a~~~p~~~-~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
+.+++..| +++.++|+||||.++.. ++++++ + +|++++++++...+.... .....................
T Consensus 279 d~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~--~~~V~sltllatplDf~~~g-~l~~f~~e~~~~~~e~~~~~~ 355 (560)
T TIGR01839 279 DAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQ--LRKVNSLTYLVSLLDSTMES-PAALFADEQTLEAAKRRSYQA 355 (560)
T ss_pred HHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCC--CCceeeEEeeecccccCCCC-cchhccChHHHHHHHHHHHhc
Confidence 99999999 89999999999999987 777775 5 799999888766544321 111111111111111122223
Q ss_pred CCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccc
Q 041488 233 EFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKE 312 (402)
Q Consensus 233 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (402)
.+.|... +...+..+..........+...+.|.+....+ +..|..+.+. ..-.....+..++....+....
T Consensus 356 G~lpg~~-ma~~F~~LrP~dliw~y~v~~yllg~~p~~fd--ll~Wn~D~t~-lPg~~~~e~l~ly~~N~L~~pG----- 426 (560)
T TIGR01839 356 GVLDGSE-MAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFD--ILYWNNDTTR-LPAAFHGDLLDMFKSNPLTRPD----- 426 (560)
T ss_pred CCcCHHH-HHHHHHhcCchhhhHHHHHHHhhcCCCcchhh--HHHHhCcCcc-chHHHHHHHHHHHhcCCCCCCC-----
Confidence 3344332 22222222111111111222332333322111 2233332211 1111111122333333222100
Q ss_pred hhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceec
Q 041488 313 ENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVM 383 (402)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 383 (402)
.... .....+|.+| ++|++++.|+.|.|+|++.+..+.+.+.+ +++++.. .+||.+=++
T Consensus 427 -~l~v----~G~~idL~~I--~~Pvl~va~~~DHIvPw~s~~~~~~l~gs----~~~fvl~-~gGHIggiv 485 (560)
T TIGR01839 427 -ALEV----CGTPIDLKKV--KCDSFSVAGTNDHITPWDAVYRSALLLGG----KRRFVLS-NSGHIQSIL 485 (560)
T ss_pred -CEEE----CCEEechhcC--CCCeEEEecCcCCcCCHHHHHHHHHHcCC----CeEEEec-CCCcccccc
Confidence 0000 1123458999 89999999999999999999999999887 4676666 588975443
No 66
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.81 E-value=3.7e-19 Score=170.86 Aligned_cols=240 Identities=18% Similarity=0.242 Sum_probs=152.7
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
+.+.||..+..|.+.+.... ..++-|.||++||.+.....|.. ......|+.+||.|+.+|+||.+.-..
T Consensus 370 ~~~~dG~~i~~~l~~P~~~~-~~k~yP~i~~~hGGP~~~~~~~~----~~~~q~~~~~G~~V~~~n~RGS~GyG~----- 439 (620)
T COG1506 370 YKSNDGETIHGWLYKPPGFD-PRKKYPLIVYIHGGPSAQVGYSF----NPEIQVLASAGYAVLAPNYRGSTGYGR----- 439 (620)
T ss_pred EEcCCCCEEEEEEecCCCCC-CCCCCCEEEEeCCCCcccccccc----chhhHHHhcCCeEEEEeCCCCCCccHH-----
Confidence 88999999999998654310 01113899999999876665422 567778889999999999998543211
Q ss_pred CCCcccccc---cHHHHhhcchHHHHHHHHHHhC----CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccC
Q 041488 136 PDDSAFWDW---TWDELVAYDLPATLQHVHDQTG----QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQ 208 (402)
Q Consensus 136 ~~~~~~~~~---~~~~~~~~d~~~~v~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~ 208 (402)
+|.+- .+.+...+|+.+.++++. +.+ +++.++|||+||++++.++.+. ..+++.+...+..+...
T Consensus 440 ----~F~~~~~~~~g~~~~~D~~~~~~~l~-~~~~~d~~ri~i~G~SyGGymtl~~~~~~---~~f~a~~~~~~~~~~~~ 511 (620)
T COG1506 440 ----EFADAIRGDWGGVDLEDLIAAVDALV-KLPLVDPERIGITGGSYGGYMTLLAATKT---PRFKAAVAVAGGVDWLL 511 (620)
T ss_pred ----HHHHhhhhccCCccHHHHHHHHHHHH-hCCCcChHHeEEeccChHHHHHHHHHhcC---chhheEEeccCcchhhh
Confidence 00000 111112336777777544 444 4899999999999999999885 35666665555432111
Q ss_pred CchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchH
Q 041488 209 MTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATST 288 (402)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (402)
.. ........ +.+. .... .+..
T Consensus 512 ~~---~~~~~~~~------------~~~~---------------------------------------~~~~-~~~~--- 533 (620)
T COG1506 512 YF---GESTEGLR------------FDPE---------------------------------------ENGG-GPPE--- 533 (620)
T ss_pred hc---cccchhhc------------CCHH---------------------------------------HhCC-Cccc---
Confidence 00 00000000 0000 0000 0000
Q ss_pred HHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCce
Q 041488 289 KNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKL 368 (402)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~ 368 (402)
+...+ ...+|....+++ .+|+|+|||++|.-||.+++.++++.+.. .+.++
T Consensus 534 -------------------------~~~~~-~~~sp~~~~~~i--~~P~LliHG~~D~~v~~~q~~~~~~aL~~-~g~~~ 584 (620)
T COG1506 534 -------------------------DREKY-EDRSPIFYADNI--KTPLLLIHGEEDDRVPIEQAEQLVDALKR-KGKPV 584 (620)
T ss_pred -------------------------ChHHH-HhcChhhhhccc--CCCEEEEeecCCccCChHHHHHHHHHHHH-cCceE
Confidence 00000 111233346678 79999999999999999999999999987 33479
Q ss_pred EEEECCCCCccceecccCcchhccHHHHHHHhcC
Q 041488 369 VVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 369 ~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 402 (402)
+++++|+.+|. +...++..++.+.+++|++++
T Consensus 585 ~~~~~p~e~H~--~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 585 ELVVFPDEGHG--FSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred EEEEeCCCCcC--CCCchhHHHHHHHHHHHHHHH
Confidence 99999999998 445577788999999999864
No 67
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.81 E-value=5.7e-20 Score=143.13 Aligned_cols=109 Identities=23% Similarity=0.265 Sum_probs=82.0
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
+....||++||+-++...-++ ..+|..|++.||.++.+|.+|.|.|.+.-... .+... .+|+..++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~----~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~G---------n~~~e-adDL~sV~ 96 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIM----KNVAKALEKEGISAFRFDFSGNGESEGSFYYG---------NYNTE-ADDLHSVI 96 (269)
T ss_pred CCceEEEEeeccccccchHHH----HHHHHHHHhcCceEEEEEecCCCCcCCccccC---------cccch-HHHHHHHH
Confidence 456799999999999886544 67899999999999999999999998732211 22222 35888888
Q ss_pred HHHHHHhCCcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 159 QHVHDQTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 159 ~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
+++.....---+++|||-||.+++.++.+.. + ++.+|..+...
T Consensus 97 q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~--d-~~~viNcsGRy 139 (269)
T KOG4667|consen 97 QYFSNSNRVVPVILGHSKGGDVVLLYASKYH--D-IRNVINCSGRY 139 (269)
T ss_pred HHhccCceEEEEEEeecCccHHHHHHHHhhc--C-chheEEccccc
Confidence 8887643223468999999999999999864 3 66677665543
No 68
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.81 E-value=3e-20 Score=158.06 Aligned_cols=77 Identities=34% Similarity=0.599 Sum_probs=65.8
Q ss_pred CcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccc
Q 041488 115 YDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNK 193 (402)
Q Consensus 115 ~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~ 193 (402)
|+|+++|+||+|.|+++ +...+.++..+|+.+.++.+++.++ ++++++||||||.+++.++..+| ++
T Consensus 1 f~vi~~d~rG~g~S~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p--~~ 68 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----------WDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYP--ER 68 (230)
T ss_dssp EEEEEEECTTSTTSSSC----------CGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSG--GG
T ss_pred CEEEEEeCCCCCCCCCC----------ccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCc--hh
Confidence 68999999999999842 1113444556688889999999999 88999999999999999999988 89
Q ss_pred cchhhccccc
Q 041488 194 LRSAALLSPI 203 (402)
Q Consensus 194 v~~~v~~~p~ 203 (402)
|+++|++++.
T Consensus 69 v~~lvl~~~~ 78 (230)
T PF00561_consen 69 VKKLVLISPP 78 (230)
T ss_dssp EEEEEEESES
T ss_pred hcCcEEEeee
Confidence 9999999985
No 69
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.79 E-value=5.7e-19 Score=149.98 Aligned_cols=130 Identities=22% Similarity=0.260 Sum_probs=97.8
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
+.+..|.....++.+... +.+++|||+||++.+...+... ...+++.|+++||+|+++|+||||.|.+...
T Consensus 5 l~~~~g~~~~~~~~p~~~-----~~~~~VlllHG~g~~~~~~~~~--~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-- 75 (266)
T TIGR03101 5 LDAPHGFRFCLYHPPVAV-----GPRGVVIYLPPFAEEMNKSRRM--VALQARAFAAGGFGVLQIDLYGCGDSAGDFA-- 75 (266)
T ss_pred ecCCCCcEEEEEecCCCC-----CCceEEEEECCCcccccchhHH--HHHHHHHHHHCCCEEEEECCCCCCCCCCccc--
Confidence 556667666555555443 3467899999998754332100 0456888988999999999999999975322
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
..+++.+. +|+.++++++.+. + ++++++||||||.+++.++.++| ++++++|+++|...
T Consensus 76 -------~~~~~~~~-~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p--~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 76 -------AARWDVWK-EDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLA--AKCNRLVLWQPVVS 135 (266)
T ss_pred -------cCCHHHHH-HHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCc--cccceEEEeccccc
Confidence 12566654 4888888888765 6 89999999999999999999887 89999999998764
No 70
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.79 E-value=3.8e-19 Score=149.06 Aligned_cols=201 Identities=16% Similarity=0.171 Sum_probs=127.8
Q ss_pred CCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHH
Q 041488 104 QSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLI 180 (402)
Q Consensus 104 ~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~ 180 (402)
+.....|+++||.|+.+|+||.+.......... ...+.....+|+.++++++.++.. +++.++|||+||.+
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~------~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~ 77 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAG------RGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYL 77 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTT------TTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhh------hccccccchhhHHHHHHHHhccccccceeEEEEcccccccc
Confidence 345668889999999999999774321000000 012223334588999999988865 68999999999999
Q ss_pred HHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhh
Q 041488 181 ALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLL 260 (402)
Q Consensus 181 a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (402)
++.++.++| ++++++|..+|............. +........+.... ..
T Consensus 78 a~~~~~~~~--~~f~a~v~~~g~~d~~~~~~~~~~-----~~~~~~~~~~~~~~--~~---------------------- 126 (213)
T PF00326_consen 78 ALLAATQHP--DRFKAAVAGAGVSDLFSYYGTTDI-----YTKAEYLEYGDPWD--NP---------------------- 126 (213)
T ss_dssp HHHHHHHTC--CGSSEEEEESE-SSTTCSBHHTCC-----HHHGHHHHHSSTTT--SH----------------------
T ss_pred cchhhcccc--eeeeeeeccceecchhcccccccc-----cccccccccCccch--hh----------------------
Confidence 999999877 999999999887654332211000 00000000000000 00
Q ss_pred hhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCC--CCCCccEE
Q 041488 261 NSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTS--IPHDLPLF 338 (402)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~~~Pvl 338 (402)
..+..... ...+.+ + ++|+|
T Consensus 127 ----------------------------~~~~~~s~----------------------------~~~~~~~~~--~~P~l 148 (213)
T PF00326_consen 127 ----------------------------EFYRELSP----------------------------ISPADNVQI--KPPVL 148 (213)
T ss_dssp ----------------------------HHHHHHHH----------------------------GGGGGGCGG--GSEEE
T ss_pred ----------------------------hhhhhhcc----------------------------ccccccccC--CCCEE
Confidence 00000000 000222 3 68999
Q ss_pred EEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhcC
Q 041488 339 LSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 339 ii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 402 (402)
++||++|..||+.++..+++.+...+. +.+++++|++||. +...+...+..+.+.+||+++
T Consensus 149 i~hG~~D~~Vp~~~s~~~~~~L~~~g~-~~~~~~~p~~gH~--~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 149 IIHGENDPRVPPSQSLRLYNALRKAGK-PVELLIFPGEGHG--FGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp EEEETTBSSSTTHHHHHHHHHHHHTTS-SEEEEEETT-SSS--TTSHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCCccCHHHHHHHHHHHHhcCC-CEEEEEcCcCCCC--CCCchhHHHHHHHHHHHHHHH
Confidence 999999999999999999999987555 4999999999996 344556678899999999863
No 71
>PRK11460 putative hydrolase; Provisional
Probab=99.77 E-value=6.7e-18 Score=142.49 Aligned_cols=185 Identities=17% Similarity=0.169 Sum_probs=118.6
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC---CC--CCCcccccccHHHHhhcc
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS---LS--PDDSAFWDWTWDELVAYD 153 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~---~~--~~~~~~~~~~~~~~~~~d 153 (402)
..++.||++||++++...| ..++..|.+.++.+.+++.+|...+..... .. ........-.+.+. ...
T Consensus 14 ~~~~~vIlLHG~G~~~~~~------~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~-~~~ 86 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAM------GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAI-MPT 86 (232)
T ss_pred CCCcEEEEEeCCCCChHHH------HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHH-HHH
Confidence 4578999999999999988 678888987776666777777543211000 00 00000000011111 113
Q ss_pred hHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhc
Q 041488 154 LPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLG 230 (402)
Q Consensus 154 ~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (402)
+.+.++++.++++ ++++++|||+||.+++.++.++| +.+.+++.+++... .
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~--~~~~~vv~~sg~~~--~---------------------- 140 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEP--GLAGRVIAFSGRYA--S---------------------- 140 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCC--CcceEEEEeccccc--c----------------------
Confidence 4445555555655 58999999999999999988876 66666665443110 0
Q ss_pred CCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCc
Q 041488 231 LDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNN 310 (402)
Q Consensus 231 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (402)
.+.
T Consensus 141 ----~~~------------------------------------------------------------------------- 143 (232)
T PRK11460 141 ----LPE------------------------------------------------------------------------- 143 (232)
T ss_pred ----ccc-------------------------------------------------------------------------
Confidence 000
Q ss_pred cchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchh
Q 041488 311 KEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQV 390 (402)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 390 (402)
.... ..|++++||++|+++|++.++++.+.+.... .++++++++++||. +.. +
T Consensus 144 -----------------~~~~--~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g-~~~~~~~~~~~gH~---i~~----~ 196 (232)
T PRK11460 144 -----------------TAPT--ATTIHLIHGGEDPVIDVAHAVAAQEALISLG-GDVTLDIVEDLGHA---IDP----R 196 (232)
T ss_pred -----------------cccC--CCcEEEEecCCCCccCHHHHHHHHHHHHHCC-CCeEEEEECCCCCC---CCH----H
Confidence 0011 5799999999999999999999999887533 25788999999998 443 3
Q ss_pred ccHHHHHHHh
Q 041488 391 LYEPLMAFFK 400 (402)
Q Consensus 391 ~~~~i~~fl~ 400 (402)
..+.+.+||+
T Consensus 197 ~~~~~~~~l~ 206 (232)
T PRK11460 197 LMQFALDRLR 206 (232)
T ss_pred HHHHHHHHHH
Confidence 4455555554
No 72
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.77 E-value=3.7e-18 Score=134.71 Aligned_cols=268 Identities=16% Similarity=0.141 Sum_probs=157.7
Q ss_pred EEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC
Q 041488 54 SVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS 133 (402)
Q Consensus 54 ~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~ 133 (402)
..+...||+.+...+++... .....|+.--+.+.....+ +.++..++++||.|+.+|+||.|.|+....
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-----~~~g~~~va~a~Gv~~~fY------RrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~ 76 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-----KASGRLVVAGATGVGQYFY------RRFAAAAAKAGFEVLTFDYRGIGQSRPASL 76 (281)
T ss_pred cccccCCCccCccccccCCC-----CCCCcEEecccCCcchhHh------HHHHHHhhccCceEEEEecccccCCCcccc
Confidence 34788999999999998774 2233455544555444443 789999999999999999999999985332
Q ss_pred CCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchh
Q 041488 134 LSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSP 212 (402)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~ 212 (402)
.-.++.+.|++..|+.+.++.+.+.++ -+.+.||||+||.+...+... .+..+....+....+......
T Consensus 77 ------~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~----~k~~a~~vfG~gagwsg~m~~ 146 (281)
T COG4757 77 ------SGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQH----PKYAAFAVFGSGAGWSGWMGL 146 (281)
T ss_pred ------ccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccccC----cccceeeEeccccccccchhh
Confidence 222568899999999999999999888 799999999999887665544 233333333332222221111
Q ss_pred HHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHH
Q 041488 213 LAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMI 292 (402)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (402)
......... -.-..|....+.. .+...+--.....+...+.
T Consensus 147 ~~~l~~~~l---------~~lv~p~lt~w~g------------------------------~~p~~l~G~G~d~p~~v~R 187 (281)
T COG4757 147 RERLGAVLL---------WNLVGPPLTFWKG------------------------------YMPKDLLGLGSDLPGTVMR 187 (281)
T ss_pred hhcccceee---------ccccccchhhccc------------------------------cCcHhhcCCCccCcchHHH
Confidence 000000000 0000000000000 0000000001111222333
Q ss_pred HHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEE
Q 041488 293 HVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQY 372 (402)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~ 372 (402)
.|..+.+.......+ ....+... . .+++ ++|+.++...+|+.+|+...+.+.+..++ ...+...
T Consensus 188 dW~RwcR~p~y~fdd--p~~~~~~q---~------yaaV--rtPi~~~~~~DD~w~P~As~d~f~~~y~n---Apl~~~~ 251 (281)
T COG4757 188 DWARWCRHPRYYFDD--PAMRNYRQ---V------YAAV--RTPITFSRALDDPWAPPASRDAFASFYRN---APLEMRD 251 (281)
T ss_pred HHHHHhcCccccccC--hhHhHHHH---H------HHHh--cCceeeeccCCCCcCCHHHHHHHHHhhhc---Cccccee
Confidence 344443322111000 00011111 0 2355 78999999999999999999999998888 3455555
Q ss_pred CCC----CCccceecccCcchhccHHHHHHH
Q 041488 373 RQD----YAHADYVMGENAGQVLYEPLMAFF 399 (402)
Q Consensus 373 ~~~----~gH~~~~~~~~~~~~~~~~i~~fl 399 (402)
++. .||++. ..+..|.+++.+++|+
T Consensus 252 ~~~~~~~lGH~gy--fR~~~Ealwk~~L~w~ 280 (281)
T COG4757 252 LPRAEGPLGHMGY--FREPFEALWKEMLGWF 280 (281)
T ss_pred cCcccCcccchhh--hccchHHHHHHHHHhh
Confidence 554 599973 3444588999999987
No 73
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.77 E-value=3.2e-17 Score=145.67 Aligned_cols=285 Identities=11% Similarity=0.056 Sum_probs=158.9
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCccc---CCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYS---RGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S---~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
+++||++..+.++.... .+++++.|.+ |+.|++.||..-+.. ++ .+++++|.. -+..+
T Consensus 102 ~~pvLiV~Pl~g~~~~L-----~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~------------~f~ldDYi~-~l~~~ 162 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATL-----LRSTVEALLP-DHDVYITDWVNARMVPLSAG------------KFDLEDYID-YLIEF 162 (406)
T ss_pred CCcEEEEcCCchHHHHH-----HHHHHHHHhC-CCcEEEEeCCCCCCCchhcC------------CCCHHHHHH-HHHHH
Confidence 47999999998666554 3789999988 999999999987733 33 457888863 33333
Q ss_pred HHHHHHHhCCcceEEecChhHHHHHHHhcCCC---cccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHh----c
Q 041488 158 LQHVHDQTGQKPHYVGHSLGTLIALASFSKDQ---PVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWL----G 230 (402)
Q Consensus 158 v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 230 (402)
+ +..|.+++++|+|+||..++.+++... .+.++++++++++...................+..+.... .
T Consensus 163 i----~~~G~~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp 238 (406)
T TIGR01849 163 I----RFLGPDIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVP 238 (406)
T ss_pred H----HHhCCCCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccC
Confidence 3 444744999999999999776655431 1267999999988776655333333332211111111111 0
Q ss_pred -----CC-CCCCchHHHHHHHHHhhcCCCCchhhhhhhhc-CCCCCC-CccccchhcccCCCcchHHHHHHHH-HHHhcC
Q 041488 231 -----LD-EFDPRGEAVVKLLKNICQKPGVDCTNLLNSFT-GQNCCL-NSSIVDVFLEHEPQATSTKNMIHVA-QMIREG 301 (402)
Q Consensus 231 -----~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 301 (402)
.. ...|.......|...-..+......+++..+. |..... +......++.... ......+..+. ..+...
T Consensus 239 ~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~-dlpge~y~~~v~~vf~~n 317 (406)
T TIGR01849 239 FPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVM-DMTAEFYLQTIDVVFQQF 317 (406)
T ss_pred ccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhcc-CCcHHHHHHHHHHHHHhC
Confidence 01 12333222222211100000011112222111 111110 0000111111111 11111111111 111111
Q ss_pred ceeeecCCccchhhcccCCCCCCCCCCCCCCCC-ccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccc
Q 041488 302 TIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHD-LPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHAD 380 (402)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~-~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 380 (402)
.+..- .+.. .....++.+| + +|+|.+.|+.|.++|+.+++.+.+...+.....++.++.+++||.+
T Consensus 318 ~L~~G-------~l~v----~G~~Vdl~~I--~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~G 384 (406)
T TIGR01849 318 LLPQG-------KFIV----EGKRVDPGAI--TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYG 384 (406)
T ss_pred CccCC-------cEEE----CCEEecHHHC--cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEE
Confidence 11110 0000 1123458899 6 9999999999999999999999997422111346677888999999
Q ss_pred eecccCcchhccHHHHHHHhcC
Q 041488 381 YVMGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 381 ~~~~~~~~~~~~~~i~~fl~~~ 402 (402)
++.....+++++..|.+||.++
T Consensus 385 vf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 385 VFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred EeeChhhhhhhchHHHHHHHhC
Confidence 8888899999999999999864
No 74
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.76 E-value=1.4e-17 Score=135.23 Aligned_cols=109 Identities=17% Similarity=0.202 Sum_probs=83.4
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHh-CCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLAD-NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
..+|.++++||.+.+.-+| ..++..|.. ...+|+++|+||||.|.-... .+.+.+.++. |+-++
T Consensus 72 t~gpil~l~HG~G~S~LSf------A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e--------~dlS~eT~~K-D~~~~ 136 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSALSF------AIFASELKSKIRCRCLALDLRGHGETKVENE--------DDLSLETMSK-DFGAV 136 (343)
T ss_pred CCccEEEEeecCcccchhH------HHHHHHHHhhcceeEEEeeccccCccccCCh--------hhcCHHHHHH-HHHHH
Confidence 5689999999999999999 667777754 468899999999999874322 1347888865 77777
Q ss_pred HHHHHHHhCCcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 158 LQHVHDQTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 158 v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
++++-.....+|+||||||||.++.+.+...-. ..+.++++++-+
T Consensus 137 i~~~fge~~~~iilVGHSmGGaIav~~a~~k~l-psl~Gl~viDVV 181 (343)
T KOG2564|consen 137 IKELFGELPPQIILVGHSMGGAIAVHTAASKTL-PSLAGLVVIDVV 181 (343)
T ss_pred HHHHhccCCCceEEEeccccchhhhhhhhhhhc-hhhhceEEEEEe
Confidence 666654444789999999999999887765422 348888877754
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.74 E-value=5.2e-17 Score=141.40 Aligned_cols=139 Identities=19% Similarity=0.285 Sum_probs=88.9
Q ss_pred CCCcEEEEEEe-cCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcc-----cCCCC
Q 041488 59 KDGYILSMQRI-PVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKY-----SRGHV 132 (402)
Q Consensus 59 ~dG~~l~~~~~-~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~-----S~~~~ 132 (402)
.-|..+.+..+ |... .+++.|+|+|+||++++...|... ..+...+...|+.|+++|..++|. ++...
T Consensus 27 ~l~~~~~~~vy~P~~~---~~~~~Pvv~~lHG~~~~~~~~~~~---~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~ 100 (283)
T PLN02442 27 TLGCSMTFSVYFPPAS---DSGKVPVLYWLSGLTCTDENFIQK---SGAQRAAAARGIALVAPDTSPRGLNVEGEADSWD 100 (283)
T ss_pred ccCCceEEEEEcCCcc---cCCCCCEEEEecCCCcChHHHHHh---hhHHHHHhhcCeEEEecCCCCCCCCCCCCccccc
Confidence 44556666655 4321 224578999999999988777331 234566667899999999887762 11000
Q ss_pred CC-------CCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 133 SL-------SPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 133 ~~-------~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
.. +........+.+.++..+++...++......+ ++++++||||||..++.++.++| ++++++++++|..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p--~~~~~~~~~~~~~ 178 (283)
T PLN02442 101 FGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNP--DKYKSVSAFAPIA 178 (283)
T ss_pred cCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCc--hhEEEEEEECCcc
Confidence 00 00000000112233334455556665555556 78999999999999999999988 9999999988875
Q ss_pred c
Q 041488 205 Y 205 (402)
Q Consensus 205 ~ 205 (402)
.
T Consensus 179 ~ 179 (283)
T PLN02442 179 N 179 (283)
T ss_pred C
Confidence 4
No 76
>PLN00021 chlorophyllase
Probab=99.74 E-value=3.2e-17 Score=143.33 Aligned_cols=103 Identities=21% Similarity=0.221 Sum_probs=75.8
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
+..|+|||+||++.+...| ..++.+|++.||.|+++|++|++.+.. . ..++ |..+++
T Consensus 50 g~~PvVv~lHG~~~~~~~y------~~l~~~Las~G~~VvapD~~g~~~~~~-----~-------~~i~-----d~~~~~ 106 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFY------SQLLQHIASHGFIVVAPQLYTLAGPDG-----T-------DEIK-----DAAAVI 106 (313)
T ss_pred CCCCEEEEECCCCCCcccH------HHHHHHHHhCCCEEEEecCCCcCCCCc-----h-------hhHH-----HHHHHH
Confidence 5578999999999988776 678899999999999999999653221 0 0121 334445
Q ss_pred HHHHHH----------hC-CcceEEecChhHHHHHHHhcCCCcc---cccchhhcccccc
Q 041488 159 QHVHDQ----------TG-QKPHYVGHSLGTLIALASFSKDQPV---NKLRSAALLSPIA 204 (402)
Q Consensus 159 ~~l~~~----------~~-~~~~lvGhS~Gg~~a~~~a~~~p~~---~~v~~~v~~~p~~ 204 (402)
+++.+. .+ ++++++||||||.+++.++..++.. .+++++|+++|..
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 555432 23 5799999999999999999886522 3678888888864
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.73 E-value=1.5e-16 Score=138.38 Aligned_cols=138 Identities=17% Similarity=0.225 Sum_probs=81.8
Q ss_pred cCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecC--CCCcccCCCCCCC
Q 041488 58 TKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANT--RGTKYSRGHVSLS 135 (402)
Q Consensus 58 ~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~--rG~G~S~~~~~~~ 135 (402)
..-|..+.+..+.+... ..++.|+|+|+||++++...|... ..+...+.+.|+.|+++|. ||+|.+.......
T Consensus 21 ~~~~~~~~~~v~~P~~~--~~~~~P~vvllHG~~~~~~~~~~~---~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~ 95 (275)
T TIGR02821 21 ETCGVPMTFGVFLPPQA--AAGPVPVLWYLSGLTCTHENFMIK---AGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWD 95 (275)
T ss_pred cccCCceEEEEEcCCCc--cCCCCCEEEEccCCCCCccHHHhh---hHHHHHHhhcCcEEEEeCCCCCcCCCCCCccccc
Confidence 34455555555533210 124478999999999999888331 1122333456999999998 6666433110000
Q ss_pred C-CC-cccc---------cccHHHHhhcchHHHHHHHHHHh--C-CcceEEecChhHHHHHHHhcCCCcccccchhhccc
Q 041488 136 P-DD-SAFW---------DWTWDELVAYDLPATLQHVHDQT--G-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLS 201 (402)
Q Consensus 136 ~-~~-~~~~---------~~~~~~~~~~d~~~~v~~l~~~~--~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~ 201 (402)
. .. ..|. .+++.++..+++ ...+.+.+ + ++++++||||||.+++.++.++| +.++++++++
T Consensus 96 ~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p--~~~~~~~~~~ 170 (275)
T TIGR02821 96 FGKGAGFYVDATEEPWSQHYRMYSYIVQEL---PALVAAQFPLDGERQGITGHSMGGHGALVIALKNP--DRFKSVSAFA 170 (275)
T ss_pred ccCCccccccCCcCcccccchHHHHHHHHH---HHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCc--ccceEEEEEC
Confidence 0 00 0000 112222222222 22233333 3 68999999999999999999988 9999999988
Q ss_pred cccc
Q 041488 202 PIAY 205 (402)
Q Consensus 202 p~~~ 205 (402)
|...
T Consensus 171 ~~~~ 174 (275)
T TIGR02821 171 PIVA 174 (275)
T ss_pred CccC
Confidence 8754
No 78
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.71 E-value=1.2e-15 Score=132.06 Aligned_cols=307 Identities=14% Similarity=0.119 Sum_probs=177.6
Q ss_pred EEcCCCcEEEEEEecC-CC--CCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCC
Q 041488 56 VTTKDGYILSMQRIPV-GR--SGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHV 132 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~-~~--~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~ 132 (402)
+.+..|..+....+.. -+ +.....-++|+|++|.+-..-..|+..+ .++++..|.++|+.|+.+|+++=..+.+
T Consensus 79 va~tpg~vV~~ndv~~liqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~-~~s~V~~l~~~g~~vfvIsw~nPd~~~~-- 155 (445)
T COG3243 79 VATTPGKVVFRNDVLELIQYKPLTEKVLKRPLLIVPPWINKFYILDLSP-EKSLVRWLLEQGLDVFVISWRNPDASLA-- 155 (445)
T ss_pred hhcCCceEEEeechhhhhccCCCCCccCCCceEeeccccCceeEEeCCC-CccHHHHHHHcCCceEEEeccCchHhhh--
Confidence 4455665554443321 11 1112234789999999988887776654 5899999999999999999999666554
Q ss_pred CCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccc-cchhhcccccccccCCc
Q 041488 133 SLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNK-LRSAALLSPIAYVGQMT 210 (402)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~-v~~~v~~~p~~~~~~~~ 210 (402)
..+++++..+++...++.+++..+ ++|.++|+|.||+++..+++..+ .+ |+.++++.....+....
T Consensus 156 ----------~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~--~k~I~S~T~lts~~DF~~~g 223 (445)
T COG3243 156 ----------AKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMA--AKRIKSLTLLTSPVDFSHAG 223 (445)
T ss_pred ----------hccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhh--hcccccceeeecchhhcccc
Confidence 348999988899999999999999 99999999999999999999876 55 99999876654433221
Q ss_pred hhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHH
Q 041488 211 SPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKN 290 (402)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (402)
...... -...+..+........++|...+.. .+. +.+.....+..+.+........+..+.+.+.... ...+...
T Consensus 224 ~l~if~-n~~~~~~~~~~i~~~g~lpg~~ma~-~F~-mLrpndliw~~fV~nyl~ge~pl~fdllyWn~ds--t~~~~~~ 298 (445)
T COG3243 224 DLGIFA-NEATIEALDADIVQKGILPGWYMAI-VFF-LLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADS--TRLPGAA 298 (445)
T ss_pred cccccc-CHHHHHHHHhhhhhccCCChHHHHH-HHH-hcCccccchHHHHHHhcCCCCCCchhHHHhhCCC--ccCchHH
Confidence 111000 0011122222222222444332221 111 1222222222333332222222222222222111 1111111
Q ss_pred HHHHH-HHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceE
Q 041488 291 MIHVA-QMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLV 369 (402)
Q Consensus 291 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~ 369 (402)
...+. +.+....+..- .++ ......+|.+| +||++++.|++|.++|++.+....+.+++ .++
T Consensus 299 ~~~~Lrn~y~~N~l~~g-------~~~----v~G~~VdL~~I--t~pvy~~a~~~DhI~P~~Sv~~g~~l~~g----~~~ 361 (445)
T COG3243 299 HSEYLRNFYLENRLIRG-------GLE----VSGTMVDLGDI--TCPVYNLAAEEDHIAPWSSVYLGARLLGG----EVT 361 (445)
T ss_pred HHHHHHHHHHhChhhcc-------ceE----ECCEEechhhc--ccceEEEeecccccCCHHHHHHHHHhcCC----ceE
Confidence 12222 11111111110 000 01123458899 99999999999999999999999988888 455
Q ss_pred EEECCCCCccceecc--cCcchhccH----HHHHHHh
Q 041488 370 VQYRQDYAHADYVMG--ENAGQVLYE----PLMAFFK 400 (402)
Q Consensus 370 ~~~~~~~gH~~~~~~--~~~~~~~~~----~i~~fl~ 400 (402)
++.. ++||...+++ .....+.+. .+.+|+.
T Consensus 362 f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~ 397 (445)
T COG3243 362 FVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLS 397 (445)
T ss_pred EEEe-cCceEEEEeCCcchhhhhcCCCCcchHHHHHH
Confidence 5554 6999987665 222333333 6666764
No 79
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.71 E-value=1.4e-16 Score=139.33 Aligned_cols=246 Identities=17% Similarity=0.173 Sum_probs=134.3
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC--
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS-- 133 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~-- 133 (402)
+.+.+|..|+.+...+.. ..++.|.||.+||.+++...| ... ..++..||.|+.+|.||.|.......
T Consensus 61 f~s~~g~~V~g~l~~P~~---~~~~~Pavv~~hGyg~~~~~~------~~~-~~~a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 61 FESFDGSRVYGWLYRPKN---AKGKLPAVVQFHGYGGRSGDP------FDL-LPWAAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp EEEGGGEEEEEEEEEES----SSSSEEEEEEE--TT--GGGH------HHH-HHHHHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred EEccCCCEEEEEEEecCC---CCCCcCEEEEecCCCCCCCCc------ccc-cccccCCeEEEEecCCCCCCCCCCcccc
Confidence 888999999998874442 226678999999999987666 222 24678999999999999993221111
Q ss_pred CCCCCccc---------ccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhccc
Q 041488 134 LSPDDSAF---------WDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLS 201 (402)
Q Consensus 134 ~~~~~~~~---------~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~ 201 (402)
.......+ ..+-+..+ ..|...+++++..... ++|.+.|.|+||.+++.+++.. ++|++++...
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~-~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd---~rv~~~~~~v 206 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRV-YLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD---PRVKAAAADV 206 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHH-HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS---ST-SEEEEES
T ss_pred CCCCCccHHhcCccCchHHHHHHHH-HHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC---ccccEEEecC
Confidence 00010111 11122223 2378888999887654 6899999999999999999886 5789888877
Q ss_pred ccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhccc
Q 041488 202 PIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEH 281 (402)
Q Consensus 202 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (402)
|... +................+...+...+ +.....+..++.+
T Consensus 207 P~l~--d~~~~~~~~~~~~~y~~~~~~~~~~d--~~~~~~~~v~~~L--------------------------------- 249 (320)
T PF05448_consen 207 PFLC--DFRRALELRADEGPYPEIRRYFRWRD--PHHEREPEVFETL--------------------------------- 249 (320)
T ss_dssp ESSS--SHHHHHHHT--STTTHHHHHHHHHHS--CTHCHHHHHHHHH---------------------------------
T ss_pred CCcc--chhhhhhcCCccccHHHHHHHHhccC--CCcccHHHHHHHH---------------------------------
Confidence 7432 11111100000000000000000000 0000000000000
Q ss_pred CCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHcc
Q 041488 282 EPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLN 361 (402)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~ 361 (402)
..+| ..|. .++| ++|+++-.|-.|+++||..+...+++++
T Consensus 250 ----------------------~Y~D----~~nf------------A~ri--~~pvl~~~gl~D~~cPP~t~fA~yN~i~ 289 (320)
T PF05448_consen 250 ----------------------SYFD----AVNF------------ARRI--KCPVLFSVGLQDPVCPPSTQFAAYNAIP 289 (320)
T ss_dssp ----------------------HTT-----HHHH------------GGG----SEEEEEEETT-SSS-HHHHHHHHCC--
T ss_pred ----------------------hhhh----HHHH------------HHHc--CCCEEEEEecCCCCCCchhHHHHHhccC
Confidence 0001 0011 2355 7999999999999999999999999998
Q ss_pred CCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhcC
Q 041488 362 DHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 362 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 402 (402)
. .+++.++|..||.. .++.-.+..++||++|
T Consensus 290 ~----~K~l~vyp~~~He~------~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 290 G----PKELVVYPEYGHEY------GPEFQEDKQLNFLKEH 320 (320)
T ss_dssp S----SEEEEEETT--SST------THHHHHHHHHHHHHH-
T ss_pred C----CeeEEeccCcCCCc------hhhHHHHHHHHHHhcC
Confidence 7 59999999999982 2233378899999875
No 80
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.70 E-value=9.1e-17 Score=123.58 Aligned_cols=178 Identities=21% Similarity=0.184 Sum_probs=127.6
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
...|..|.+|..+--..+....- -+.++..|.+.||.++.+|+||.|.|.+.- +..+.+. +|..+++
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkv-v~~la~~l~~~G~atlRfNfRgVG~S~G~f----------D~GiGE~--~Da~aal 92 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKV-VQTLARALVKRGFATLRFNFRGVGRSQGEF----------DNGIGEL--EDAAAAL 92 (210)
T ss_pred CCCceEEecCCCccccCccCCHH-HHHHHHHHHhCCceEEeecccccccccCcc----------cCCcchH--HHHHHHH
Confidence 56788899987555444331111 045777888999999999999999998732 2234444 3999999
Q ss_pred HHHHHHhC-Cc-ceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCC
Q 041488 159 QHVHDQTG-QK-PHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDP 236 (402)
Q Consensus 159 ~~l~~~~~-~~-~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 236 (402)
+|+.++.+ .+ ..+.|+|+|+++++.++.+.| .+...+.++|.....
T Consensus 93 dW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~---e~~~~is~~p~~~~~----------------------------- 140 (210)
T COG2945 93 DWLQARHPDSASCWLAGFSFGAYIAMQLAMRRP---EILVFISILPPINAY----------------------------- 140 (210)
T ss_pred HHHHhhCCCchhhhhcccchHHHHHHHHHHhcc---cccceeeccCCCCch-----------------------------
Confidence 99999888 34 479999999999999999875 233444333332100
Q ss_pred chHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhc
Q 041488 237 RGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKK 316 (402)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (402)
++.
T Consensus 141 ----------------------------------------------------------------------dfs------- 143 (210)
T COG2945 141 ----------------------------------------------------------------------DFS------- 143 (210)
T ss_pred ----------------------------------------------------------------------hhh-------
Confidence 000
Q ss_pred ccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHH
Q 041488 317 HYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 396 (402)
Q Consensus 317 ~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~ 396 (402)
.+... .+|.++|+|+.|.++++....++++-.+ .+++.+++++|+ + ......+.+.|.
T Consensus 144 ----------~l~P~--P~~~lvi~g~~Ddvv~l~~~l~~~~~~~------~~~i~i~~a~HF---F-~gKl~~l~~~i~ 201 (210)
T COG2945 144 ----------FLAPC--PSPGLVIQGDADDVVDLVAVLKWQESIK------ITVITIPGADHF---F-HGKLIELRDTIA 201 (210)
T ss_pred ----------hccCC--CCCceeEecChhhhhcHHHHHHhhcCCC------CceEEecCCCce---e-cccHHHHHHHHH
Confidence 02222 5799999999999999988887777632 678899999999 3 466788999999
Q ss_pred HHHh
Q 041488 397 AFFK 400 (402)
Q Consensus 397 ~fl~ 400 (402)
+||+
T Consensus 202 ~~l~ 205 (210)
T COG2945 202 DFLE 205 (210)
T ss_pred HHhh
Confidence 9984
No 81
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=4.9e-15 Score=126.86 Aligned_cols=311 Identities=14% Similarity=0.098 Sum_probs=160.3
Q ss_pred CcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCC-CCCCHHHHHHh-------CCCcEEeecCCCCc-ccCCC
Q 041488 61 GYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLP-PEQSLAFLLAD-------NGYDVWLANTRGTK-YSRGH 131 (402)
Q Consensus 61 G~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~-~~~~~~~~l~~-------~g~~v~~~D~rG~G-~S~~~ 131 (402)
...+.|..++.-+ .....+||++||+.+++....... ...-+.+.+.. ..|-|||.|-.|.+ .|.++
T Consensus 35 ~~~vay~T~Gtln----~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP 110 (368)
T COG2021 35 DARVAYETYGTLN----AEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGP 110 (368)
T ss_pred CcEEEEEeccccc----ccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCC
Confidence 3456677665432 133568999999999766432110 00112233323 34889999999976 67776
Q ss_pred CCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-Ccce-EEecChhHHHHHHHhcCCCcccccchhhcccccccccCC
Q 041488 132 VSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPH-YVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQM 209 (402)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~-lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~ 209 (402)
...+|..+.| .-.|..+...|...+-+.+++++| +++. +||-||||+.++.++..+| ++|+++|.++........
T Consensus 111 ~s~~p~g~~y-g~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yP--d~V~~~i~ia~~~r~s~~ 187 (368)
T COG2021 111 SSINPGGKPY-GSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYP--DRVRRAIPIATAARLSAQ 187 (368)
T ss_pred CCcCCCCCcc-ccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhCh--HHHhhhheecccccCCHH
Confidence 6666552222 112333333344455677889999 8876 9999999999999999988 999999999876543221
Q ss_pred chhHHHHhhhhhHHHHHHHhcCCC----CCCch-HHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCC---ccccchhccc
Q 041488 210 TSPLAKNAADNFLAEALYWLGLDE----FDPRG-EAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLN---SSIVDVFLEH 281 (402)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~----~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 281 (402)
. ..........+..- ..+-... ..|.. -...+++.-+....+.....-+......+.... ...++.|+.+
T Consensus 188 ~-ia~~~~~r~AI~~D-P~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~ 265 (368)
T COG2021 188 N-IAFNEVQRQAIEAD-PDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDY 265 (368)
T ss_pred H-HHHHHHHHHHHHhC-CCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHH
Confidence 1 00011111000000 0000000 11211 111222222322222111111111000000000 0011111111
Q ss_pred CCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCC---CCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHH
Q 041488 282 EPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNP---PLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLE 358 (402)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~ 358 (402)
...-....|....|-.+.+.+..+..... ...-|++| ++|+|++.-+.|.+.|++..+.+.+
T Consensus 266 -------------qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i--~~~~lv~gi~sD~lfp~~~~~~~~~ 330 (368)
T COG2021 266 -------------QGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARI--KAPVLVVGITSDWLFPPELQRALAE 330 (368)
T ss_pred -------------HHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcC--ccCEEEEEecccccCCHHHHHHHHH
Confidence 10000111222222111122222211111 11227788 7999999999999999999999999
Q ss_pred HccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 359 SLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
.++... .-.++-...||..|+. ..+.+.+.|..||+.
T Consensus 331 ~L~~~~---~~~~i~S~~GHDaFL~---e~~~~~~~i~~fL~~ 367 (368)
T COG2021 331 ALPAAG---ALREIDSPYGHDAFLV---ESEAVGPLIRKFLAL 367 (368)
T ss_pred hccccC---ceEEecCCCCchhhhc---chhhhhHHHHHHhhc
Confidence 999821 1224445789998665 344577888888864
No 82
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.68 E-value=2.4e-16 Score=132.55 Aligned_cols=193 Identities=23% Similarity=0.273 Sum_probs=119.4
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCccccc-c--cHHHHhhcchH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWD-W--TWDELVAYDLP 155 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~-~--~~~~~~~~d~~ 155 (402)
++.|.||++|+..+-.... +.+++.|+++||.|+++|+-+-..... .. ..+....+. + ...+....|+.
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~------~~~ad~lA~~Gy~v~~pD~f~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 83 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNI------RDLADRLAEEGYVVLAPDLFGGRGAPP-SD-PEEAFAAMRELFAPRPEQVAADLQ 83 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHH------HHHHHHHHHTT-EEEEE-CCCCTS--C-CC-HHCHHHHHHHCHHHSHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHH------HHHHHHHHhcCCCEEecccccCCCCCc-cc-hhhHHHHHHHHHhhhHHHHHHHHH
Confidence 4688999999987755332 578999999999999999755322010 00 000000000 0 00122344778
Q ss_pred HHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCC
Q 041488 156 ATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLD 232 (402)
Q Consensus 156 ~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
+.+++++++.. ++|.++|+|+||.+++.++... ..+++.|..-|... ...+. .
T Consensus 84 aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~---~~~~a~v~~yg~~~---~~~~~----~-------------- 139 (218)
T PF01738_consen 84 AAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD---PRVDAAVSFYGGSP---PPPPL----E-------------- 139 (218)
T ss_dssp HHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT---TTSSEEEEES-SSS---GGGHH----H--------------
T ss_pred HHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc---cccceEEEEcCCCC---CCcch----h--------------
Confidence 88999988872 7999999999999999999874 56777776555100 00000 0
Q ss_pred CCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccc
Q 041488 233 EFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKE 312 (402)
Q Consensus 233 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T Consensus 140 -------------------------------------------------------------------------------- 139 (218)
T PF01738_consen 140 -------------------------------------------------------------------------------- 139 (218)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccC------
Q 041488 313 ENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGEN------ 386 (402)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~------ 386 (402)
...++ ++|+++++|++|+.++++..+.+.+.+...+ ...++++||+++|. +....
T Consensus 140 --------------~~~~~--~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~-~~~~~~~y~ga~Hg--F~~~~~~~~~~ 200 (218)
T PF01738_consen 140 --------------DAPKI--KAPVLILFGENDPFFPPEEVEALEEALKAAG-VDVEVHVYPGAGHG--FANPSRPPYDP 200 (218)
T ss_dssp --------------HGGG----S-EEEEEETT-TTS-HHHHHHHHHHHHCTT-TTEEEEEETT--TT--TTSTTSTT--H
T ss_pred --------------hhccc--CCCEeecCccCCCCCChHHHHHHHHHHHhcC-CcEEEEECCCCccc--ccCCCCcccCH
Confidence 01233 6899999999999999999888888885433 36999999999997 22222
Q ss_pred -cchhccHHHHHHHhcC
Q 041488 387 -AGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 387 -~~~~~~~~i~~fl~~~ 402 (402)
..++.++.+++||+++
T Consensus 201 ~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 201 AAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 2356778899999875
No 83
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.68 E-value=5.8e-16 Score=129.39 Aligned_cols=116 Identities=12% Similarity=0.042 Sum_probs=81.8
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC-CCCCCcccccccHHHHhhcchHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS-LSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
++.|+||++||.+.+...+... ..+...+.+.||.|+++|.||+|.+..... ..+... ........|+..+
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~---~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 82 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVID---WGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHR-----ARGTGEVESLHQL 82 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhh---cChHHHHHhCCeEEEecCCcCccccCCCCCCCCcccc-----CCCCccHHHHHHH
Confidence 4578999999999887766311 135556656899999999999886542110 000000 0000113367788
Q ss_pred HHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 158 LQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 158 v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
++++.++++ ++++++||||||.+++.++.++| +.+.+++.+++..
T Consensus 83 i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~~~~~g~~ 130 (212)
T TIGR01840 83 IDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYP--DVFAGGASNAGLP 130 (212)
T ss_pred HHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCc--hhheEEEeecCCc
Confidence 888888776 58999999999999999999988 8899988887654
No 84
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.66 E-value=3.9e-15 Score=120.73 Aligned_cols=240 Identities=17% Similarity=0.221 Sum_probs=149.2
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
++..+|.+|..|.+-+.. ..+..|.||-.||++++...|.. ...++..||.|+.+|.||.|.|+......
T Consensus 61 f~g~~g~rI~gwlvlP~~---~~~~~P~vV~fhGY~g~~g~~~~-------~l~wa~~Gyavf~MdvRGQg~~~~dt~~~ 130 (321)
T COG3458 61 FTGYGGARIKGWLVLPRH---EKGKLPAVVQFHGYGGRGGEWHD-------MLHWAVAGYAVFVMDVRGQGSSSQDTADP 130 (321)
T ss_pred EeccCCceEEEEEEeecc---cCCccceEEEEeeccCCCCCccc-------cccccccceeEEEEecccCCCccccCCCC
Confidence 889999999999885442 22568899999999999987722 12456789999999999999885422222
Q ss_pred CCC---ccc---------ccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhcc
Q 041488 136 PDD---SAF---------WDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALL 200 (402)
Q Consensus 136 ~~~---~~~---------~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~ 200 (402)
|.+ ..+ ..|-+.... .|+..+++.+..... ++|.+.|.|.||.+++.++... .+|++++.+
T Consensus 131 p~~~s~pG~mtrGilD~kd~yyyr~v~-~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~---~rik~~~~~ 206 (321)
T COG3458 131 PGGPSDPGFMTRGILDRKDTYYYRGVF-LDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD---PRIKAVVAD 206 (321)
T ss_pred CCCCcCCceeEeecccCCCceEEeeeh-HHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcC---hhhhccccc
Confidence 211 111 111122221 277778888776544 6899999999999999998886 688898887
Q ss_pred cccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcc
Q 041488 201 SPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLE 280 (402)
Q Consensus 201 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (402)
-|.....+ ..... ........+...+.... |. ....+
T Consensus 207 ~Pfl~df~--r~i~~-~~~~~ydei~~y~k~h~--~~---e~~v~----------------------------------- 243 (321)
T COG3458 207 YPFLSDFP--RAIEL-ATEGPYDEIQTYFKRHD--PK---EAEVF----------------------------------- 243 (321)
T ss_pred ccccccch--hheee-cccCcHHHHHHHHHhcC--ch---HHHHH-----------------------------------
Confidence 77542111 00000 00000111111111111 00 00000
Q ss_pred cCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHc
Q 041488 281 HEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESL 360 (402)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~ 360 (402)
.++ .-+|... . ..++ ++|+|+..|--|+++||..+..+++++
T Consensus 244 --------~TL------------~yfD~~n----~------------A~Ri--K~pvL~svgL~D~vcpPstqFA~yN~l 285 (321)
T COG3458 244 --------ETL------------SYFDIVN----L------------AARI--KVPVLMSVGLMDPVCPPSTQFAAYNAL 285 (321)
T ss_pred --------HHH------------hhhhhhh----H------------HHhh--ccceEEeecccCCCCCChhhHHHhhcc
Confidence 000 0011000 0 2245 789999999999999999999999999
Q ss_pred cCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHh
Q 041488 361 NDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 400 (402)
Q Consensus 361 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~ 400 (402)
+. .+++.+++.-+|.+ .|.-..+.+..|++
T Consensus 286 ~~----~K~i~iy~~~aHe~------~p~~~~~~~~~~l~ 315 (321)
T COG3458 286 TT----SKTIEIYPYFAHEG------GPGFQSRQQVHFLK 315 (321)
T ss_pred cC----CceEEEeecccccc------CcchhHHHHHHHHH
Confidence 98 68888899888984 33434555666665
No 85
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.64 E-value=1.1e-15 Score=127.93 Aligned_cols=60 Identities=13% Similarity=0.152 Sum_probs=47.4
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
++|++++||++|+++|.+.++...+.+.+... +++++.+++.||. + ..+..+.+.+||++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~-~v~~~~~~g~gH~---i----~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGA-NVEFHEYPGGGHE---I----SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT--GEEEEEETT-SSS---------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCC-CEEEEEcCCCCCC---C----CHHHHHHHHHHHhh
Confidence 47999999999999999999999999887544 6899999999998 2 25677889999875
No 86
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.64 E-value=2.9e-15 Score=131.90 Aligned_cols=134 Identities=16% Similarity=0.109 Sum_probs=82.3
Q ss_pred CCCCcceEE-EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCC
Q 041488 47 SDDGICASV-VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGT 125 (402)
Q Consensus 47 ~~~~~~~~~-~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~ 125 (402)
...++.+++ |+-+++....+.+.|.++ ++.|+||++-|.-+-...+. ..+..+|+..|+.++++|.||.
T Consensus 160 l~~~~i~~v~iP~eg~~I~g~LhlP~~~-----~p~P~VIv~gGlDs~qeD~~-----~l~~~~l~~rGiA~LtvDmPG~ 229 (411)
T PF06500_consen 160 LSDYPIEEVEIPFEGKTIPGYLHLPSGE-----KPYPTVIVCGGLDSLQEDLY-----RLFRDYLAPRGIAMLTVDMPGQ 229 (411)
T ss_dssp HSSSEEEEEEEEETTCEEEEEEEESSSS-----S-EEEEEEE--TTS-GGGGH-----HHHHCCCHHCT-EEEEE--TTS
T ss_pred hCCCCcEEEEEeeCCcEEEEEEEcCCCC-----CCCCEEEEeCCcchhHHHHH-----HHHHHHHHhCCCEEEEEccCCC
Confidence 346667777 666665555566667653 44555666555554444431 1233457789999999999999
Q ss_pred cccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhcccc
Q 041488 126 KYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSP 202 (402)
Q Consensus 126 G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p 202 (402)
|.|..... .++. +. -..++++++..... .+|.++|.|+||+++.++|..++ ++|+++|..+|
T Consensus 230 G~s~~~~l-~~D~--------~~----l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~--~RlkavV~~Ga 294 (411)
T PF06500_consen 230 GESPKWPL-TQDS--------SR----LHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALED--PRLKAVVALGA 294 (411)
T ss_dssp GGGTTT-S--S-C--------CH----HHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT--TT-SEEEEES-
T ss_pred cccccCCC-CcCH--------HH----HHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcc--cceeeEeeeCc
Confidence 99864321 1210 11 13366788776543 58999999999999999987766 89999999998
Q ss_pred ccc
Q 041488 203 IAY 205 (402)
Q Consensus 203 ~~~ 205 (402)
...
T Consensus 295 ~vh 297 (411)
T PF06500_consen 295 PVH 297 (411)
T ss_dssp --S
T ss_pred hHh
Confidence 753
No 87
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.64 E-value=9.7e-15 Score=126.66 Aligned_cols=101 Identities=26% Similarity=0.393 Sum_probs=75.5
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhC--CCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADN--GYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
.++|+++||++.+...|.. ....+... .|+|+++|+||||.|. .. .++...+ ...+
T Consensus 21 ~~~i~~~hg~~~~~~~~~~------~~~~~~~~~~~~~~~~~d~~g~g~s~-~~----------~~~~~~~-----~~~~ 78 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRP------VFKVLPALAARYRVIAPDLRGHGRSD-PA----------GYSLSAY-----ADDL 78 (282)
T ss_pred CCeEEEeCCCCCchhhhHH------HHHHhhccccceEEEEecccCCCCCC-cc----------cccHHHH-----HHHH
Confidence 4489999999999998832 11222221 1999999999999996 00 0022222 4456
Q ss_pred HHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 159 QHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 159 ~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
+.+.+.++ .+++++||||||.+++.++.++| ++++++|++++...
T Consensus 79 ~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p--~~~~~~v~~~~~~~ 124 (282)
T COG0596 79 AALLDALGLEKVVLVGHSMGGAVALALALRHP--DRVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHhCCCceEEEEecccHHHHHHHHHhcc--hhhheeeEecCCCC
Confidence 66677788 78999999999999999999988 89999999997653
No 88
>PRK10162 acetyl esterase; Provisional
Probab=99.61 E-value=9.4e-14 Score=123.15 Aligned_cols=125 Identities=21% Similarity=0.176 Sum_probs=83.3
Q ss_pred ceEE-EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccc---cccccccCCCCCCHHHHHHh-CCCcEEeecCCCCc
Q 041488 52 CASV-VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLM---DAVTWLLLPPEQSLAFLLAD-NGYDVWLANTRGTK 126 (402)
Q Consensus 52 ~~~~-~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~---~~~~~~~~~~~~~~~~~l~~-~g~~v~~~D~rG~G 126 (402)
.+++ +.+.+| .+..+.+.+.. ...|+||++||.+. +...| ..+...|++ .|+.|+.+|+|...
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~~-----~~~p~vv~~HGGg~~~g~~~~~------~~~~~~la~~~g~~Vv~vdYrlap 124 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQP-----DSQATLFYLHGGGFILGNLDTH------DRIMRLLASYSGCTVIGIDYTLSP 124 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCCC-----CCCCEEEEEeCCcccCCCchhh------hHHHHHHHHHcCCEEEEecCCCCC
Confidence 3444 666777 35655554332 34689999999773 33444 456777776 59999999999744
Q ss_pred ccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHH---HhC---CcceEEecChhHHHHHHHhcCCCc----ccccch
Q 041488 127 YSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHD---QTG---QKPHYVGHSLGTLIALASFSKDQP----VNKLRS 196 (402)
Q Consensus 127 ~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~---~~~---~~~~lvGhS~Gg~~a~~~a~~~p~----~~~v~~ 196 (402)
...- | . ..+|+.++++++.+ .++ ++++++|+|+||.+++.++.+... +.++.+
T Consensus 125 e~~~-----p-----------~-~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~ 187 (318)
T PRK10162 125 EARF-----P-----------Q-AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAG 187 (318)
T ss_pred CCCC-----C-----------C-cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhh
Confidence 3211 1 1 13466677777765 344 589999999999999988754110 157889
Q ss_pred hhccccccc
Q 041488 197 AALLSPIAY 205 (402)
Q Consensus 197 ~v~~~p~~~ 205 (402)
+|++.|...
T Consensus 188 ~vl~~p~~~ 196 (318)
T PRK10162 188 VLLWYGLYG 196 (318)
T ss_pred eEEECCccC
Confidence 998888654
No 89
>PRK10115 protease 2; Provisional
Probab=99.60 E-value=4.6e-14 Score=136.69 Aligned_cols=143 Identities=10% Similarity=0.046 Sum_probs=97.8
Q ss_pred CCcceEE-EEcCCCcEEEEEEec-CCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCc
Q 041488 49 DGICASV-VTTKDGYILSMQRIP-VGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTK 126 (402)
Q Consensus 49 ~~~~~~~-~~~~dG~~l~~~~~~-~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G 126 (402)
.+..+.+ +++.||..|.++.+- .+.. ..++.|.||++||....+..... ......|+++||.|+.++.||-|
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~--~~~~~P~ll~~hGg~~~~~~p~f----~~~~~~l~~rG~~v~~~n~RGs~ 486 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHF--RKGHNPLLVYGYGSYGASIDADF----SFSRLSLLDRGFVYAIVHVRGGG 486 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCC--CCCCCCEEEEEECCCCCCCCCCc----cHHHHHHHHCCcEEEEEEcCCCC
Confidence 3344444 889999999986553 3210 12456999999998777654321 34455788999999999999965
Q ss_pred ccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 127 YSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 127 ~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
.=.+.-... . .+.......+|+.++++++.++-- +++.+.|.|.||+++..++.++| +.++++|+..|.
T Consensus 487 g~G~~w~~~----g--~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~P--dlf~A~v~~vp~ 558 (686)
T PRK10115 487 ELGQQWYED----G--KFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRP--ELFHGVIAQVPF 558 (686)
T ss_pred ccCHHHHHh----h--hhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcCh--hheeEEEecCCc
Confidence 432110000 0 000000113378888999987632 68999999999999999999888 999999998887
Q ss_pred cc
Q 041488 204 AY 205 (402)
Q Consensus 204 ~~ 205 (402)
..
T Consensus 559 ~D 560 (686)
T PRK10115 559 VD 560 (686)
T ss_pred hh
Confidence 64
No 90
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.60 E-value=1.3e-13 Score=113.70 Aligned_cols=126 Identities=20% Similarity=0.201 Sum_probs=93.9
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
+.+.+|..+.....-.+. ...+.+..+||-+||.+++...| +.+...|.+.|+|++..++||+|.+.+....
T Consensus 11 ~~~~~~~~~~~~a~y~D~-~~~gs~~gTVv~~hGsPGSH~DF------kYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~- 82 (297)
T PF06342_consen 11 FQAENGKIVTVQAVYEDS-LPSGSPLGTVVAFHGSPGSHNDF------KYIRPPLDEAGIRFIGINYPGFGFTPGYPDQ- 82 (297)
T ss_pred cccccCceEEEEEEEEec-CCCCCCceeEEEecCCCCCccch------hhhhhHHHHcCeEEEEeCCCCCCCCCCCccc-
Confidence 455666655544332111 00113355899999999999998 7888999999999999999999999864321
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
.|+-.+ -...++.+++.++ ++++.+|||.||-.|+..+..+| ..++++++|.+.
T Consensus 83 -------~~~n~e-----r~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G~ 138 (297)
T PF06342_consen 83 -------QYTNEE-----RQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP----LHGLVLINPPGL 138 (297)
T ss_pred -------ccChHH-----HHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc----cceEEEecCCcc
Confidence 223333 3355888888888 78999999999999999999974 569999999764
No 91
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.58 E-value=1.1e-14 Score=115.59 Aligned_cols=86 Identities=28% Similarity=0.371 Sum_probs=57.8
Q ss_pred EEEecCcccccc-ccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHH
Q 041488 84 VFLQHGLLMDAV-TWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVH 162 (402)
Q Consensus 84 vll~HG~~~~~~-~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~ 162 (402)
|+++||++++.. .|. ..+...|... ++|-.+|+ + .| ++...++.+.
T Consensus 1 v~IvhG~~~s~~~HW~-----~wl~~~l~~~-~~V~~~~~------~-----~P----------------~~~~W~~~l~ 47 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQ-----PWLERQLENS-VRVEQPDW------D-----NP----------------DLDEWVQALD 47 (171)
T ss_dssp EEEE--TTSSTTTSTH-----HHHHHHHTTS-EEEEEC--------T-----S------------------HHHHHHHHH
T ss_pred CEEeCCCCCCCccHHH-----HHHHHhCCCC-eEEecccc------C-----CC----------------CHHHHHHHHH
Confidence 689999999855 673 3566666444 78887777 1 12 3444566666
Q ss_pred HHhC---CcceEEecChhHHHHHHHh-cCCCcccccchhhcccccc
Q 041488 163 DQTG---QKPHYVGHSLGTLIALASF-SKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 163 ~~~~---~~~~lvGhS~Gg~~a~~~a-~~~p~~~~v~~~v~~~p~~ 204 (402)
+... +++++||||+|+..+++++ .... .+|.++++++|..
T Consensus 48 ~~i~~~~~~~ilVaHSLGc~~~l~~l~~~~~--~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 48 QAIDAIDEPTILVAHSLGCLTALRWLAEQSQ--KKVAGALLVAPFD 91 (171)
T ss_dssp HCCHC-TTTEEEEEETHHHHHHHHHHHHTCC--SSEEEEEEES--S
T ss_pred HHHhhcCCCeEEEEeCHHHHHHHHHHhhccc--ccccEEEEEcCCC
Confidence 6544 5789999999999999999 5544 8999999999874
No 92
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=1.2e-13 Score=111.70 Aligned_cols=223 Identities=14% Similarity=0.117 Sum_probs=130.7
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
..+.-++++|=.|+++..| +.+...| ...+.+++.++||+|.--+... ..|+..++
T Consensus 5 ~~~~~L~cfP~AGGsa~~f------r~W~~~l-p~~iel~avqlPGR~~r~~ep~-----------------~~di~~La 60 (244)
T COG3208 5 GARLRLFCFPHAGGSASLF------RSWSRRL-PADIELLAVQLPGRGDRFGEPL-----------------LTDIESLA 60 (244)
T ss_pred CCCceEEEecCCCCCHHHH------HHHHhhC-CchhheeeecCCCcccccCCcc-----------------cccHHHHH
Confidence 4467789998888888877 6777766 3469999999999985433221 12444444
Q ss_pred HHHHHHhC-----CcceEEecChhHHHHHHHhcCCCcc-cccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCC
Q 041488 159 QHVHDQTG-----QKPHYVGHSLGTLIALASFSKDQPV-NKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLD 232 (402)
Q Consensus 159 ~~l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~-~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
+.+...+. .++.+.||||||++|...|.+-... ..+.++.+.+...-...............++..+...-|..
T Consensus 61 d~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p 140 (244)
T COG3208 61 DELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTP 140 (244)
T ss_pred HHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCC
Confidence 44444322 5899999999999999988762110 12444544433221111111111111222333333333332
Q ss_pred -CCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCcc
Q 041488 233 -EFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNK 311 (402)
Q Consensus 233 -~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (402)
.+.....++..++..+..+ + .....|.+..
T Consensus 141 ~e~led~El~~l~LPilRAD----------------------------------------------~--~~~e~Y~~~~- 171 (244)
T COG3208 141 PELLEDPELMALFLPILRAD----------------------------------------------F--RALESYRYPP- 171 (244)
T ss_pred hHHhcCHHHHHHHHHHHHHH----------------------------------------------H--HHhcccccCC-
Confidence 1122222222222211000 0 0011121111
Q ss_pred chhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhc
Q 041488 312 EENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVL 391 (402)
Q Consensus 312 ~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 391 (402)
-..+ ++|+.++.|++|..|+.+....+.+..++ ..++.+++ +||+ +-.++.+++
T Consensus 172 ----------------~~pl--~~pi~~~~G~~D~~vs~~~~~~W~~~t~~----~f~l~~fd-GgHF---fl~~~~~~v 225 (244)
T COG3208 172 ----------------PAPL--ACPIHAFGGEKDHEVSRDELGAWREHTKG----DFTLRVFD-GGHF---FLNQQREEV 225 (244)
T ss_pred ----------------CCCc--CcceEEeccCcchhccHHHHHHHHHhhcC----CceEEEec-Ccce---ehhhhHHHH
Confidence 1234 79999999999999999999999999886 58889987 7898 445777888
Q ss_pred cHHHHHHHh
Q 041488 392 YEPLMAFFK 400 (402)
Q Consensus 392 ~~~i~~fl~ 400 (402)
.+.|...+.
T Consensus 226 ~~~i~~~l~ 234 (244)
T COG3208 226 LARLEQHLA 234 (244)
T ss_pred HHHHHHHhh
Confidence 888887764
No 93
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.55 E-value=2.1e-13 Score=114.59 Aligned_cols=210 Identities=20% Similarity=0.234 Sum_probs=138.5
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCC-cccCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGT-KYSRGHVSL 134 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~-G~S~~~~~~ 134 (402)
+.+.|+..-.+...|.+. +..|.||++|+..+-.... +.+++.|+++||.|+++|+-+. |.+......
T Consensus 7 ~~~~~~~~~~~~a~P~~~-----~~~P~VIv~hei~Gl~~~i------~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~ 75 (236)
T COG0412 7 IPAPDGELPAYLARPAGA-----GGFPGVIVLHEIFGLNPHI------RDVARRLAKAGYVVLAPDLYGRQGDPTDIEDE 75 (236)
T ss_pred eeCCCceEeEEEecCCcC-----CCCCEEEEEecccCCchHH------HHHHHHHHhCCcEEEechhhccCCCCCccccc
Confidence 455553333333344443 3348999999988766654 7899999999999999998663 333221100
Q ss_pred CCCCcc--cccccHHHHhhcchHHHHHHHHHHh-C--CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCC
Q 041488 135 SPDDSA--FWDWTWDELVAYDLPATLQHVHDQT-G--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQM 209 (402)
Q Consensus 135 ~~~~~~--~~~~~~~~~~~~d~~~~v~~l~~~~-~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~ 209 (402)
...-+. +...+. .....|+.+.++++.++. . .+|.++|+||||.+++.++...| .|++.|..-+......
T Consensus 76 ~~~~~~~~~~~~~~-~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~---~v~a~v~fyg~~~~~~- 150 (236)
T COG0412 76 PAELETGLVERVDP-AEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP---EVKAAVAFYGGLIADD- 150 (236)
T ss_pred HHHHhhhhhccCCH-HHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC---CccEEEEecCCCCCCc-
Confidence 000000 011223 233459999999999877 2 68999999999999999998853 6777774433210000
Q ss_pred chhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHH
Q 041488 210 TSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTK 289 (402)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (402)
T Consensus 151 -------------------------------------------------------------------------------- 150 (236)
T COG0412 151 -------------------------------------------------------------------------------- 150 (236)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceE
Q 041488 290 NMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLV 369 (402)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~ 369 (402)
..+..++ ++|+|+..|+.|..+|......+.+.+..... ..+
T Consensus 151 -----------------------------------~~~~~~~--~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~-~~~ 192 (236)
T COG0412 151 -----------------------------------TADAPKI--KVPVLLHLAGEDPYIPAADVDALAAALEDAGV-KVD 192 (236)
T ss_pred -----------------------------------ccccccc--cCcEEEEecccCCCCChhHHHHHHHHHHhcCC-Cee
Confidence 0002244 78999999999999999988888888877321 478
Q ss_pred EEECCCCCccceeccc----------CcchhccHHHHHHHhc
Q 041488 370 VQYRQDYAHADYVMGE----------NAGQVLYEPLMAFFKL 401 (402)
Q Consensus 370 ~~~~~~~gH~~~~~~~----------~~~~~~~~~i~~fl~~ 401 (402)
+.+++++.|. +... ...+..++.+++|+++
T Consensus 193 ~~~y~ga~H~--F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~ 232 (236)
T COG0412 193 LEIYPGAGHG--FANDRADYHPGYDAAAAEDAWQRVLAFFKR 232 (236)
T ss_pred EEEeCCCccc--cccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 8999999997 2221 1235667888888875
No 94
>COG0400 Predicted esterase [General function prediction only]
Probab=99.53 E-value=3.5e-13 Score=109.38 Aligned_cols=59 Identities=19% Similarity=0.258 Sum_probs=46.9
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
.+|++++||+.|++||...+.++.+.+.... ..++...++ .||. + +.+-.+.+.+|+.+
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g-~~v~~~~~~-~GH~---i----~~e~~~~~~~wl~~ 204 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASG-ADVEVRWHE-GGHE---I----PPEELEAARSWLAN 204 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcC-CCEEEEEec-CCCc---C----CHHHHHHHHHHHHh
Confidence 5799999999999999999999999887733 368888888 9998 2 34456677777754
No 95
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.52 E-value=2.3e-14 Score=97.57 Aligned_cols=78 Identities=27% Similarity=0.371 Sum_probs=62.9
Q ss_pred CcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcc
Q 041488 61 GYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSA 140 (402)
Q Consensus 61 G~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~ 140 (402)
|.+|.++.|.+.+ +.+.+|+++||++.++..| ..++..|+++||.|+++|+||||.|.+.....+
T Consensus 1 G~~L~~~~w~p~~-----~~k~~v~i~HG~~eh~~ry------~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~---- 65 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----PPKAVVVIVHGFGEHSGRY------AHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHID---- 65 (79)
T ss_pred CcEEEEEEecCCC-----CCCEEEEEeCCcHHHHHHH------HHHHHHHHhCCCEEEEECCCcCCCCCCcccccC----
Confidence 6789999998774 3588999999999999987 789999999999999999999999997544322
Q ss_pred cccccHHHHhhcchHHHH
Q 041488 141 FWDWTWDELVAYDLPATL 158 (402)
Q Consensus 141 ~~~~~~~~~~~~d~~~~v 158 (402)
+++++.. |+..++
T Consensus 66 ----~~~~~v~-D~~~~~ 78 (79)
T PF12146_consen 66 ----SFDDYVD-DLHQFI 78 (79)
T ss_pred ----CHHHHHH-HHHHHh
Confidence 5666643 555544
No 96
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.52 E-value=4e-14 Score=127.53 Aligned_cols=110 Identities=16% Similarity=0.181 Sum_probs=81.0
Q ss_pred CCCCcEEEecCccccc--cccccCCCCCCHHHHHHh--CCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcch
Q 041488 79 GNRLPVFLQHGLLMDA--VTWLLLPPEQSLAFLLAD--NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDL 154 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~--~~~~~~~~~~~~~~~l~~--~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~ 154 (402)
..+|++|++||++++. ..|.. .+...|.. ..|+|+++|++|+|.|...... . ....+ ..++
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~-----~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~--------~-~t~~v-g~~l 103 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVP-----KLVAALYEREPSANVIVVDWLSRAQQHYPTSA--------A-YTKLV-GKDV 103 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHH-----HHHHHHHhccCCCEEEEEECCCcCCCCCcccc--------c-cHHHH-HHHH
Confidence 4588999999998764 34521 34444432 3699999999999987542110 1 22333 3378
Q ss_pred HHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 155 PATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 155 ~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
+++++++.+.++ ++++||||||||.++..++.+.| .+|.++++++|+..
T Consensus 104 a~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p--~rV~rItgLDPAgP 155 (442)
T TIGR03230 104 AKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTK--HKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCC--cceeEEEEEcCCCC
Confidence 888888876554 79999999999999999998877 89999999999753
No 97
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.52 E-value=3.8e-14 Score=119.77 Aligned_cols=111 Identities=21% Similarity=0.258 Sum_probs=71.9
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC----CCcccCCCCCCCCCCcccccccHHHHhhcchH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR----GTKYSRGHVSLSPDDSAFWDWTWDELVAYDLP 155 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~ 155 (402)
....||||.|.+++-.+-.. -..++..|.+.||.|+-+-++ |+|.+ +++.-+ +|+.
T Consensus 32 ~~~~llfIGGLtDGl~tvpY---~~~La~aL~~~~wsl~q~~LsSSy~G~G~~----------------SL~~D~-~eI~ 91 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPY---LPDLAEALEETGWSLFQVQLSSSYSGWGTS----------------SLDRDV-EEIA 91 (303)
T ss_dssp SSSEEEEE--TT--TT-STC---HHHHHHHHT-TT-EEEEE--GGGBTTS-S------------------HHHHH-HHHH
T ss_pred CCcEEEEECCCCCCCCCCch---HHHHHHHhccCCeEEEEEEecCccCCcCcc----------------hhhhHH-HHHH
Confidence 46689999999987665211 256888887789999998866 45533 455553 4899
Q ss_pred HHHHHHHHHh----C-CcceEEecChhHHHHHHHhcCCCc---ccccchhhcccccccccCCc
Q 041488 156 ATLQHVHDQT----G-QKPHYVGHSLGTLIALASFSKDQP---VNKLRSAALLSPIAYVGQMT 210 (402)
Q Consensus 156 ~~v~~l~~~~----~-~~~~lvGhS~Gg~~a~~~a~~~p~---~~~v~~~v~~~p~~~~~~~~ 210 (402)
++|++++... + ++|+|+|||.|+.-+++|+..... ...|+++|+-+|+.......
T Consensus 92 ~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~ 154 (303)
T PF08538_consen 92 QLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAIL 154 (303)
T ss_dssp HHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTT
T ss_pred HHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhh
Confidence 9999999883 4 799999999999999999876421 36799999999987655443
No 98
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.50 E-value=7.4e-14 Score=133.22 Aligned_cols=128 Identities=19% Similarity=0.139 Sum_probs=97.4
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCcccccc---ccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAV---TWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHV 132 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~---~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~ 132 (402)
+++.||.+|.+..+.+.. .++.|+||++||++.+.. .+ ....+..|+++||.|+++|+||+|.|.+..
T Consensus 1 i~~~DG~~L~~~~~~P~~----~~~~P~Il~~~gyg~~~~~~~~~-----~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~ 71 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG----GGPVPVILSRTPYGKDAGLRWGL-----DKTEPAWFVAQGYAVVIQDTRGRGASEGEF 71 (550)
T ss_pred CcCCCCCEEEEEEEecCC----CCCCCEEEEecCCCCchhhcccc-----ccccHHHHHhCCcEEEEEeccccccCCCce
Confidence 357899999987664331 145789999999997653 12 123456788999999999999999998742
Q ss_pred CCCCCCcccccccHHHHhhcchHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 133 SLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
. .++ .. ...|+.++++++.++.. +++.++|||+||.+++.++..+| .+++++|..++...
T Consensus 72 ~---------~~~-~~-~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~--~~l~aiv~~~~~~d 133 (550)
T TIGR00976 72 D---------LLG-SD-EAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQP--PALRAIAPQEGVWD 133 (550)
T ss_pred E---------ecC-cc-cchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCC--CceeEEeecCcccc
Confidence 2 111 12 24489999999988733 69999999999999999999987 89999998877643
No 99
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.47 E-value=4.8e-13 Score=107.12 Aligned_cols=127 Identities=17% Similarity=0.208 Sum_probs=78.6
Q ss_pred EEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCC-cccCCCC
Q 041488 54 SVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGT-KYSRGHV 132 (402)
Q Consensus 54 ~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~-G~S~~~~ 132 (402)
..+...||..|+.|+-++.+. .+...++||+..|++...+.+ ..++.+|+..||+|+.||.-.| |.|++..
T Consensus 5 hvi~~~~~~~I~vwet~P~~~--~~~~~~tiliA~Gf~rrmdh~------agLA~YL~~NGFhViRyDsl~HvGlSsG~I 76 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNN--EPKRNNTILIAPGFARRMDHF------AGLAEYLSANGFHVIRYDSLNHVGLSSGDI 76 (294)
T ss_dssp EEEEETTTEEEEEEEE---TT--S---S-EEEEE-TT-GGGGGG------HHHHHHHHTTT--EEEE---B---------
T ss_pred ceeEcCCCCEEEEeccCCCCC--CcccCCeEEEecchhHHHHHH------HHHHHHHhhCCeEEEeccccccccCCCCCh
Confidence 337788999999999876541 233468999999999999988 7799999999999999999877 9998732
Q ss_pred CCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 133 SLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
.+|+++... .|+..+++++. ..| .++.|+.-|+-|-+|+..+++- .+.-+|..-++
T Consensus 77 ---------~eftms~g~-~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGV 133 (294)
T PF02273_consen 77 ---------NEFTMSIGK-ASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGV 133 (294)
T ss_dssp -------------HHHHH-HHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--
T ss_pred ---------hhcchHHhH-HHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeee
Confidence 256777664 48999999998 456 8999999999999999999862 34455544333
No 100
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.47 E-value=6.1e-14 Score=121.12 Aligned_cols=109 Identities=22% Similarity=0.249 Sum_probs=80.0
Q ss_pred CCCCcEEEecCccccc-cccccCCCCCCHHHHHH-hCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHH
Q 041488 79 GNRLPVFLQHGLLMDA-VTWLLLPPEQSLAFLLA-DNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPA 156 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~-~~~~~~~~~~~~~~~l~-~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 156 (402)
..+|++|++||+.++. ..|. ..++..+. ..+|+|+++|+++++.+.... ...+..... +++..
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~-----~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~---------a~~~~~~v~-~~la~ 98 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWI-----SDLRKAYLSRGDYNVIVVDWGRGANPNYPQ---------AVNNTRVVG-AELAK 98 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHH-----HHHHHHHHhcCCCEEEEEECccccccChHH---------HHHhHHHHH-HHHHH
Confidence 3478999999999987 5662 23454443 468999999999974322100 011233332 37888
Q ss_pred HHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 157 TLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 157 ~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
+++.+.+..+ +++++|||||||.++..++.+.| ++|.++++++|+.
T Consensus 99 ~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~--~~v~~iv~LDPa~ 147 (275)
T cd00707 99 FLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLN--GKLGRITGLDPAG 147 (275)
T ss_pred HHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhc--CccceeEEecCCc
Confidence 8888887743 68999999999999999999877 8999999999875
No 101
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.42 E-value=7e-13 Score=114.90 Aligned_cols=150 Identities=18% Similarity=0.137 Sum_probs=92.1
Q ss_pred CCCCCcceEE-EEcCCCcEEEEEEe-cCCCCCCCCCCCCcEEEecCcccccccccc------------CCCCCCHHHHHH
Q 041488 46 ASDDGICASV-VTTKDGYILSMQRI-PVGRSGGEPGNRLPVFLQHGLLMDAVTWLL------------LPPEQSLAFLLA 111 (402)
Q Consensus 46 ~~~~~~~~~~-~~~~dG~~l~~~~~-~~~~~~~~~~~~~~vll~HG~~~~~~~~~~------------~~~~~~~~~~l~ 111 (402)
...++..|.+ |.+.++..+..+.+ |.+ ..++-|.||++||.+.+...... .-+.+.++..|+
T Consensus 82 qrdGY~~EKv~f~~~p~~~vpaylLvPd~----~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LA 157 (390)
T PF12715_consen 82 QRDGYTREKVEFNTTPGSRVPAYLLVPDG----AKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLA 157 (390)
T ss_dssp EETTEEEEEEEE--STTB-EEEEEEEETT------S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHH
T ss_pred ecCCeEEEEEEEEccCCeeEEEEEEecCC----CCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHH
Confidence 4667777777 88888888887755 544 12667899999998776532110 011345788999
Q ss_pred hCCCcEEeecCCCCcccCCCCCCCCCC-ccc---------ccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhH
Q 041488 112 DNGYDVWLANTRGTKYSRGHVSLSPDD-SAF---------WDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGT 178 (402)
Q Consensus 112 ~~g~~v~~~D~rG~G~S~~~~~~~~~~-~~~---------~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg 178 (402)
++||.|+++|.+|+|+........... .++ ..+|+..+..+|...+++++...-. ++|.++|+||||
T Consensus 158 k~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg 237 (390)
T PF12715_consen 158 KRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGG 237 (390)
T ss_dssp TTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGH
T ss_pred hCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccH
Confidence 999999999999999965432211110 000 1246666667788889999987655 689999999999
Q ss_pred HHHHHHhcCCCcccccchhhcccc
Q 041488 179 LIALASFSKDQPVNKLRSAALLSP 202 (402)
Q Consensus 179 ~~a~~~a~~~p~~~~v~~~v~~~p 202 (402)
..++.+++.. ++|++.|..+-
T Consensus 238 ~~a~~LaALD---dRIka~v~~~~ 258 (390)
T PF12715_consen 238 YRAWWLAALD---DRIKATVANGY 258 (390)
T ss_dssp HHHHHHHHH----TT--EEEEES-
T ss_pred HHHHHHHHcc---hhhHhHhhhhh
Confidence 9999998875 78888876654
No 102
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.41 E-value=3.9e-11 Score=99.07 Aligned_cols=280 Identities=18% Similarity=0.210 Sum_probs=158.0
Q ss_pred ceEE-EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccc-cccCCCCCCHHHHHHhCCCcEEeecCCCCcccC
Q 041488 52 CASV-VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVT-WLLLPPEQSLAFLLADNGYDVWLANTRGTKYSR 129 (402)
Q Consensus 52 ~~~~-~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~ 129 (402)
+.++ +.|.-|. +++...+..+ +++|++|=.|..+.|..+ |...+.....+. +.++ |-|+.+|.||+-.-.
T Consensus 22 ~~e~~V~T~~G~-v~V~V~Gd~~-----~~kpaiiTyhDlglN~~scFq~ff~~p~m~e-i~~~-fcv~HV~~PGqe~gA 93 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYGDPK-----GNKPAIITYHDLGLNHKSCFQGFFNFPDMAE-ILEH-FCVYHVDAPGQEDGA 93 (326)
T ss_pred ceeeeecccccc-EEEEEecCCC-----CCCceEEEecccccchHhHhHHhhcCHhHHH-HHhh-eEEEecCCCccccCC
Confidence 4555 7777764 5555555554 458889999999998876 433332233444 4344 999999999985432
Q ss_pred CCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccC
Q 041488 130 GHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQ 208 (402)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~ 208 (402)
..- |. +|.+..+ +|+++.+..+++.++ +.++-+|--.|+++..++|..|| ++|.++|++++......
T Consensus 94 p~~---p~-----~y~yPsm--d~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp--~rV~GLvLIn~~~~a~g 161 (326)
T KOG2931|consen 94 PSF---PE-----GYPYPSM--DDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHP--ERVLGLVLINCDPCAKG 161 (326)
T ss_pred ccC---CC-----CCCCCCH--HHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcCh--hheeEEEEEecCCCCch
Confidence 211 11 1122222 266677888888889 89999999999999999999999 99999999998764333
Q ss_pred CchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCC-CCCCccccchhcccCCCcch
Q 041488 209 MTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQN-CCLNSSIVDVFLEHEPQATS 287 (402)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 287 (402)
+..-.... +........+.....+ ..++...+|.+ ..-+.+.+..|.+.......
T Consensus 162 wiew~~~K----~~s~~l~~~Gmt~~~~--------------------d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N 217 (326)
T KOG2931|consen 162 WIEWAYNK----VSSNLLYYYGMTQGVK--------------------DYLLAHHFGKEELGNNSDIVQEYRQHLGERLN 217 (326)
T ss_pred HHHHHHHH----HHHHHHHhhchhhhHH--------------------HHHHHHHhccccccccHHHHHHHHHHHHhcCC
Confidence 32111111 0011111111111111 11111112211 11122222222222222222
Q ss_pred HHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCc
Q 041488 288 TKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDK 367 (402)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~ 367 (402)
..++..+...+..+. |... .. +.. ...+ +||+|++.|+..+.+ +.+.++..++.. ..
T Consensus 218 ~~Nl~~fl~ayn~R~----DL~~--------~r--~~~--~~tl--kc~vllvvGd~Sp~~--~~vv~~n~~Ldp---~~ 274 (326)
T KOG2931|consen 218 PKNLALFLNAYNGRR----DLSI--------ER--PKL--GTTL--KCPVLLVVGDNSPHV--SAVVECNSKLDP---TY 274 (326)
T ss_pred hhHHHHHHHHhcCCC----Cccc--------cC--CCc--Cccc--cccEEEEecCCCchh--hhhhhhhcccCc---cc
Confidence 233333332222110 0000 00 000 1134 599999999998765 445666666655 46
Q ss_pred eEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 368 LVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 368 ~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
..+..+.++|=. ...++|.++.+.+.=|++.
T Consensus 275 ttllk~~d~g~l---~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 275 TTLLKMADCGGL---VQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred ceEEEEcccCCc---ccccCchHHHHHHHHHHcc
Confidence 778888899887 4677999999999988863
No 103
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.40 E-value=3.9e-12 Score=110.59 Aligned_cols=132 Identities=20% Similarity=0.133 Sum_probs=87.9
Q ss_pred CCcEEEEEEecCCCCCCCCCCCCcEEEecCccccc-cccccCC---CCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 60 DGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDA-VTWLLLP---PEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 60 dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~-~~~~~~~---~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
||.+|....+.+.. ...++-|+||..|+++.+. ....... ........++++||.|++.|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~--~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGA--DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEecCC--CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC
Confidence 78889888774410 1236678999999998643 1111000 0011122388999999999999999999844321
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccc
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYV 206 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~ 206 (402)
......|..++|+++.++.- ++|.++|.|++|...+.+|+..| ..+++++...+....
T Consensus 79 -----------~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~--p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 79 -----------SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRP--PHLKAIVPQSGWSDL 138 (272)
T ss_dssp -----------SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT---TTEEEEEEESE-SBT
T ss_pred -----------ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCC--CCceEEEecccCCcc
Confidence 12234499999999999844 69999999999999999999877 889999987765543
No 104
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=1.2e-11 Score=112.05 Aligned_cols=241 Identities=16% Similarity=0.114 Sum_probs=153.4
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCcccccc-----ccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAV-----TWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRG 130 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~-----~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~ 130 (402)
+++..|..+..-.+.+.+ .+..++-|+|+++.|.++-.- .|.. +--...|++.||-|+++|-||.-.-
T Consensus 618 fqs~tg~~lYgmiyKPhn-~~pgkkYptvl~VYGGP~VQlVnnsfkgi~----ylR~~~LaslGy~Vv~IDnRGS~hR-- 690 (867)
T KOG2281|consen 618 FQSKTGLTLYGMIYKPHN-FQPGKKYPTVLNVYGGPGVQLVNNSFKGIQ----YLRFCRLASLGYVVVFIDNRGSAHR-- 690 (867)
T ss_pred eecCCCcEEEEEEEcccc-CCCCCCCceEEEEcCCCceEEeecccccee----hhhhhhhhhcceEEEEEcCCCcccc--
Confidence 677777776665554432 122345789999999887433 2211 1123367789999999999994321
Q ss_pred CCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC----CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccc
Q 041488 131 HVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG----QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYV 206 (402)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~ 206 (402)
+ .+.+......+.....+|...-++++.+++| +++.+.|||+||+++++.+.++| +-++..|.-+|+..+
T Consensus 691 --G--lkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P--~IfrvAIAGapVT~W 764 (867)
T KOG2281|consen 691 --G--LKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYP--NIFRVAIAGAPVTDW 764 (867)
T ss_pred --c--hhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCc--ceeeEEeccCcceee
Confidence 1 1111111223334445578888999999987 68999999999999999999988 999999988887654
Q ss_pred cCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcc
Q 041488 207 GQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQAT 286 (402)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (402)
.....-.. .+.++.++ .. ...|
T Consensus 765 ~~YDTgYT-----------ERYMg~P~----~n-----------------------------------E~gY-------- 786 (867)
T KOG2281|consen 765 RLYDTGYT-----------ERYMGYPD----NN-----------------------------------EHGY-------- 786 (867)
T ss_pred eeecccch-----------hhhcCCCc----cc-----------------------------------hhcc--------
Confidence 43211100 00011000 00 0000
Q ss_pred hHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCC
Q 041488 287 STKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGD 366 (402)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~ 366 (402)
....+.... .. |.+- ....|++||--|.-|.....-++.+.+-.+++
T Consensus 787 ~agSV~~~V------------------------ek------lpde--pnRLlLvHGliDENVHF~Hts~Lvs~lvkagK- 833 (867)
T KOG2281|consen 787 GAGSVAGHV------------------------EK------LPDE--PNRLLLVHGLIDENVHFAHTSRLVSALVKAGK- 833 (867)
T ss_pred cchhHHHHH------------------------hh------CCCC--CceEEEEecccccchhhhhHHHHHHHHHhCCC-
Confidence 000000000 00 2222 34699999999999999988888888766444
Q ss_pred ceEEEECCCCCccceecccCcchhccHHHHHHHhcC
Q 041488 367 KLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 367 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 402 (402)
..++.++|+--|. +-..+..+-.-..++.||+++
T Consensus 834 pyeL~IfP~ERHs--iR~~es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 834 PYELQIFPNERHS--IRNPESGIYYEARLLHFLQEN 867 (867)
T ss_pred ceEEEEccccccc--cCCCccchhHHHHHHHHHhhC
Confidence 6999999999998 455666777778899999863
No 105
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.38 E-value=4e-12 Score=124.08 Aligned_cols=88 Identities=19% Similarity=0.147 Sum_probs=69.7
Q ss_pred CHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHH--------------h---CC
Q 041488 105 SLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQ--------------T---GQ 167 (402)
Q Consensus 105 ~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~--------------~---~~ 167 (402)
.+..+|+++||.|+..|.||.|.|++... .+......|..++|+++..+ . .+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~-----------~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnG 338 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT-----------TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNG 338 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc-----------cCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCC
Confidence 45678889999999999999999998432 12122344899999999842 1 16
Q ss_pred cceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 168 KPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 168 ~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
+|.++|.|+||.+++.+|...| ..++++|..++...
T Consensus 339 kVGm~G~SY~G~~~~~aAa~~p--p~LkAIVp~a~is~ 374 (767)
T PRK05371 339 KVAMTGKSYLGTLPNAVATTGV--EGLETIIPEAAISS 374 (767)
T ss_pred eeEEEEEcHHHHHHHHHHhhCC--CcceEEEeeCCCCc
Confidence 9999999999999999998877 88999998877643
No 106
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.37 E-value=9.1e-12 Score=99.95 Aligned_cols=88 Identities=18% Similarity=0.257 Sum_probs=60.8
Q ss_pred EEEecCccccccccccCCCCCCHHHHHHhCC--CcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHH
Q 041488 84 VFLQHGLLMDAVTWLLLPPEQSLAFLLADNG--YDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHV 161 (402)
Q Consensus 84 vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g--~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l 161 (402)
||.+||+.++..+.-. ..+.+++++.+ ..+.++|++-+- . +....++.+
T Consensus 2 ilYlHGF~Ssp~S~Ka----~~l~~~~~~~~~~~~~~~p~l~~~p--------------------~-----~a~~~l~~~ 52 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKA----QALKQYFAEHGPDIQYPCPDLPPFP--------------------E-----EAIAQLEQL 52 (187)
T ss_pred eEEecCCCCCCCCHHH----HHHHHHHHHhCCCceEECCCCCcCH--------------------H-----HHHHHHHHH
Confidence 8999999999876522 34566676654 456777776521 0 222345555
Q ss_pred HHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 162 HDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 162 ~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
.+... +.+.|+|.||||+.|..++.+++ +++ |+++|+..
T Consensus 53 i~~~~~~~~~liGSSlGG~~A~~La~~~~----~~a-vLiNPav~ 92 (187)
T PF05728_consen 53 IEELKPENVVLIGSSLGGFYATYLAERYG----LPA-VLINPAVR 92 (187)
T ss_pred HHhCCCCCeEEEEEChHHHHHHHHHHHhC----CCE-EEEcCCCC
Confidence 55555 56999999999999999988754 233 88898764
No 107
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.37 E-value=3e-11 Score=101.37 Aligned_cols=270 Identities=16% Similarity=0.127 Sum_probs=140.8
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccc-cccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVT-WLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSL 134 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~-~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~ 134 (402)
+.|.-| .+++...+..+ +++|++|=.|-.+-|..+ |...+.. .-...+ .+.|.++.+|.||+..-....
T Consensus 4 v~t~~G-~v~V~v~G~~~-----~~kp~ilT~HDvGlNh~scF~~ff~~-~~m~~i-~~~f~i~Hi~aPGqe~ga~~~-- 73 (283)
T PF03096_consen 4 VETPYG-SVHVTVQGDPK-----GNKPAILTYHDVGLNHKSCFQGFFNF-EDMQEI-LQNFCIYHIDAPGQEEGAATL-- 73 (283)
T ss_dssp EEETTE-EEEEEEESS-------TTS-EEEEE--TT--HHHHCHHHHCS-HHHHHH-HTTSEEEEEE-TTTSTT------
T ss_pred eccCce-EEEEEEEecCC-----CCCceEEEeccccccchHHHHHHhcc-hhHHHH-hhceEEEEEeCCCCCCCcccc--
Confidence 556666 45655555543 468999999999998876 5333321 223333 478999999999997643211
Q ss_pred CCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccccCCchhH
Q 041488 135 SPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVGQMTSPL 213 (402)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~ 213 (402)
|. .|.-=|+++ +++.+..+++.++ +.++-+|--.|+++..++|..+| ++|.++|+++|......+..-.
T Consensus 74 -p~--~y~yPsmd~-----LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p--~~V~GLiLvn~~~~~~gw~Ew~ 143 (283)
T PF03096_consen 74 -PE--GYQYPSMDQ-----LAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHP--ERVLGLILVNPTCTAAGWMEWF 143 (283)
T ss_dssp --T--T-----HHH-----HHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSG--GGEEEEEEES---S---HHHHH
T ss_pred -cc--cccccCHHH-----HHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCc--cceeEEEEEecCCCCccHHHHH
Confidence 11 111114444 4455777777888 89999999999999999999988 9999999999976543332211
Q ss_pred HHHhhhhhHHHHHHHhcCCCCCCc---hHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHH
Q 041488 214 AKNAADNFLAEALYWLGLDEFDPR---GEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKN 290 (402)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (402)
..... ...+......+. --+++.+....... +.+.+..+...........+
T Consensus 144 ~~K~~-------~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~-------------------n~Dlv~~yr~~l~~~~Np~N 197 (283)
T PF03096_consen 144 YQKLS-------SWLLYSYGMTSSVKDYLLWHYFGKEEEEN-------------------NSDLVQTYRQHLDERINPKN 197 (283)
T ss_dssp HHHHH--------------CTTS-HHHHHHHHHS-HHHHHC-------------------T-HHHHHHHHHHHT-TTHHH
T ss_pred HHHHh-------cccccccccccchHHhhhhcccccccccc-------------------cHHHHHHHHHHHhcCCCHHH
Confidence 11111 111111111111 01111111111111 11222222222222223345
Q ss_pred HHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEE
Q 041488 291 MIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVV 370 (402)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~ 370 (402)
+..+.+.+..+.- ....++.. .+|+|++.|+..+.+ +.+.++..++.. ....+
T Consensus 198 l~~f~~sy~~R~D--------------------L~~~~~~~--~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp---~~ttl 250 (283)
T PF03096_consen 198 LALFLNSYNSRTD--------------------LSIERPSL--GCPVLLVVGDNSPHV--DDVVEMNSKLDP---TKTTL 250 (283)
T ss_dssp HHHHHHHHHT-------------------------SECTTC--CS-EEEEEETTSTTH--HHHHHHHHHS-C---CCEEE
T ss_pred HHHHHHHHhcccc--------------------chhhcCCC--CCCeEEEEecCCcch--hhHHHHHhhcCc---ccceE
Confidence 5555544432210 01113344 699999999999765 566788888866 46888
Q ss_pred EECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 371 QYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 371 ~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
..++++|=. ...|+|.++.+.+.=||+.
T Consensus 251 lkv~dcGgl---V~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 251 LKVADCGGL---VLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp EEETT-TT----HHHH-HHHHHHHHHHHHHH
T ss_pred EEecccCCc---ccccCcHHHHHHHHHHHcc
Confidence 999999877 3679999999999999874
No 108
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.35 E-value=1.5e-11 Score=104.36 Aligned_cols=101 Identities=16% Similarity=0.140 Sum_probs=75.0
Q ss_pred CcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHH
Q 041488 82 LPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHV 161 (402)
Q Consensus 82 ~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l 161 (402)
++|+|+||.+++...| ..++..|....+.|+.++.+|.+..... ..++++++. ..++.|
T Consensus 1 ~~lf~~p~~gG~~~~y------~~la~~l~~~~~~v~~i~~~~~~~~~~~-----------~~si~~la~----~y~~~I 59 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSY------RPLARALPDDVIGVYGIEYPGRGDDEPP-----------PDSIEELAS----RYAEAI 59 (229)
T ss_dssp -EEEEESSTTCSGGGG------HHHHHHHTTTEEEEEEECSTTSCTTSHE-----------ESSHHHHHH----HHHHHH
T ss_pred CeEEEEcCCccCHHHH------HHHHHhCCCCeEEEEEEecCCCCCCCCC-----------CCCHHHHHH----HHHHHh
Confidence 3799999999999887 7899988433499999999999733211 127777754 456666
Q ss_pred HHHhC-CcceEEecChhHHHHHHHhcCCC-cccccchhhccccc
Q 041488 162 HDQTG-QKPHYVGHSLGTLIALASFSKDQ-PVNKLRSAALLSPI 203 (402)
Q Consensus 162 ~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p-~~~~v~~~v~~~p~ 203 (402)
++..+ +++.|+|||+||.+|+..|.+=. ....+..++++++.
T Consensus 60 ~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 60 RARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp HHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred hhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 66666 69999999999999999887521 11468889988854
No 109
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=1.1e-11 Score=120.68 Aligned_cols=246 Identities=14% Similarity=0.111 Sum_probs=147.8
Q ss_pred CCcceEE-EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHH-HHhCCCcEEeecCCCCc
Q 041488 49 DGICASV-VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFL-LADNGYDVWLANTRGTK 126 (402)
Q Consensus 49 ~~~~~~~-~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~-l~~~g~~v~~~D~rG~G 126 (402)
..|..+. ....||....+..+.++... ..++-|.+|.+||.+++... ...+. -.+... ....|+.|+.+|.||.|
T Consensus 494 ~~p~~~~~~i~~~~~~~~~~~~lP~~~~-~~~kyPllv~~yGGP~sq~v-~~~~~-~~~~~~~~s~~g~~v~~vd~RGs~ 570 (755)
T KOG2100|consen 494 ALPIVEFGKIEIDGITANAILILPPNFD-PSKKYPLLVVVYGGPGSQSV-TSKFS-VDWNEVVVSSRGFAVLQVDGRGSG 570 (755)
T ss_pred cCCcceeEEEEeccEEEEEEEecCCCCC-CCCCCCEEEEecCCCCccee-eeeEE-ecHHHHhhccCCeEEEEEcCCCcC
Confidence 3444444 22228888877777443211 12345678888998873321 11111 233333 44679999999999987
Q ss_pred ccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccc-cchhhcccc
Q 041488 127 YSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNK-LRSAALLSP 202 (402)
Q Consensus 127 ~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~-v~~~v~~~p 202 (402)
.....-... - .-.+.+...+|...+++++.+..- .++.++|+|.||.+++..+...| .+ +++.+.++|
T Consensus 571 ~~G~~~~~~----~--~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~--~~~fkcgvavaP 642 (755)
T KOG2100|consen 571 GYGWDFRSA----L--PRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP--GDVFKCGVAVAP 642 (755)
T ss_pred CcchhHHHH----h--hhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCc--CceEEEEEEecc
Confidence 654311000 0 001222223466666777766543 58999999999999999999865 55 555599999
Q ss_pred cccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccC
Q 041488 203 IAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHE 282 (402)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (402)
+.++. ....... . ..++. |... ...|.+
T Consensus 643 Vtd~~-~yds~~t--e--------rymg~----p~~~-----------------------------------~~~y~e-- 670 (755)
T KOG2100|consen 643 VTDWL-YYDSTYT--E--------RYMGL----PSEN-----------------------------------DKGYEE-- 670 (755)
T ss_pred eeeee-eeccccc--H--------hhcCC----Cccc-----------------------------------cchhhh--
Confidence 87654 2111000 0 00000 0000 000000
Q ss_pred CCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCcc-EEEEEeCCCccCChhHHHHHHHHcc
Q 041488 283 PQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLP-LFLSYGGADALSDVNDVKLLLESLN 361 (402)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~P-vlii~G~~D~~v~~~~~~~~~~~~~ 361 (402)
..+...+.++ +.| .|++||+.|.-|+.+++..+.++|.
T Consensus 671 ---------------------------------------~~~~~~~~~~--~~~~~LliHGt~DdnVh~q~s~~~~~aL~ 709 (755)
T KOG2100|consen 671 ---------------------------------------SSVSSPANNI--KTPKLLLIHGTEDDNVHFQQSAILIKALQ 709 (755)
T ss_pred ---------------------------------------ccccchhhhh--ccCCEEEEEcCCcCCcCHHHHHHHHHHHH
Confidence 0011113444 344 5999999999999999999999999
Q ss_pred CCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 362 DHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 362 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
.++.. .++.++|+.+|. +...+.-..+...+..|++.
T Consensus 710 ~~gv~-~~~~vypde~H~--is~~~~~~~~~~~~~~~~~~ 746 (755)
T KOG2100|consen 710 NAGVP-FRLLVYPDENHG--ISYVEVISHLYEKLDRFLRD 746 (755)
T ss_pred HCCCc-eEEEEeCCCCcc--cccccchHHHHHHHHHHHHH
Confidence 87765 999999999998 34444447788899999863
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.34 E-value=2.6e-12 Score=123.03 Aligned_cols=125 Identities=18% Similarity=0.181 Sum_probs=86.8
Q ss_pred EEcCCCcEEEEEEecCCCC--CCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRS--GGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVS 133 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~--~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~ 133 (402)
+...+|.++.+.+...+.. .......|+|||+||++++...| ..++..|+++||+|+++|+||||.|.....
T Consensus 422 ~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~------~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~ 495 (792)
T TIGR03502 422 LTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENA------LAFAGTLAAAGVATIAIDHPLHGARSFDAN 495 (792)
T ss_pred EEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHH------HHHHHHHHhCCcEEEEeCCCCCCccccccc
Confidence 6677787777666543311 00112246899999999999998 778999988999999999999999954211
Q ss_pred CC-----CCC-ccccc--------ccHHHHhhcchHHHHHHHH------HH------hC-CcceEEecChhHHHHHHHhc
Q 041488 134 LS-----PDD-SAFWD--------WTWDELVAYDLPATLQHVH------DQ------TG-QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 134 ~~-----~~~-~~~~~--------~~~~~~~~~d~~~~v~~l~------~~------~~-~~~~lvGhS~Gg~~a~~~a~ 186 (402)
.. ..+ -.|.+ .++.+... |+..+...+. .. ++ .+++++||||||.+++.++.
T Consensus 496 ~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~-Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 496 ASGVNATNANVLAYMNLASLLVARDNLRQSIL-DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred cccccccccCccceeccccccccccCHHHHHH-HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 00 000 11211 15555544 7888888776 22 33 58999999999999999987
Q ss_pred C
Q 041488 187 K 187 (402)
Q Consensus 187 ~ 187 (402)
.
T Consensus 575 ~ 575 (792)
T TIGR03502 575 Y 575 (792)
T ss_pred h
Confidence 6
No 111
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.34 E-value=1.1e-11 Score=105.30 Aligned_cols=122 Identities=16% Similarity=0.196 Sum_probs=93.2
Q ss_pred CCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhC---C------CcEEeecCCCCcccC
Q 041488 59 KDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADN---G------YDVWLANTRGTKYSR 129 (402)
Q Consensus 59 ~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~---g------~~v~~~D~rG~G~S~ 129 (402)
..|.++|+.+...++. .....-.|+|++|||+++-+.+ ..++..|.+. | |+|+++.+||+|-|+
T Consensus 131 IeGL~iHFlhvk~p~~-k~~k~v~PlLl~HGwPGsv~EF------ykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd 203 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQK-KKKKKVKPLLLLHGWPGSVREF------YKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSD 203 (469)
T ss_pred hcceeEEEEEecCCcc-ccCCcccceEEecCCCchHHHH------HhhhhhhcCccccCCccceeEEEeccCCCCcccCc
Confidence 5688999888855431 1223456899999999999887 4455556543 2 789999999999999
Q ss_pred CCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccc
Q 041488 130 GHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSP 202 (402)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p 202 (402)
++.... +... ..+.++..+.-++| .++++-|-.||+.++..+|...| ++|.++=+-.+
T Consensus 204 ~~sk~G----------Fn~~---a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyP--enV~GlHlnm~ 262 (469)
T KOG2565|consen 204 APSKTG----------FNAA---ATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYP--ENVLGLHLNMC 262 (469)
T ss_pred CCccCC----------ccHH---HHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcc--hhhhHhhhccc
Confidence 754321 2222 45678899999999 99999999999999999999988 99988875443
No 112
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.33 E-value=9.2e-12 Score=103.50 Aligned_cols=103 Identities=22% Similarity=0.286 Sum_probs=75.2
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
+.-|+|||+||+.... .| +..+.+++++.||.|+.+|+...+.... -.+ ..++.+++
T Consensus 15 g~yPVv~f~~G~~~~~-s~-----Ys~ll~hvAShGyIVV~~d~~~~~~~~~---------------~~~--~~~~~~vi 71 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLIN-SW-----YSQLLEHVASHGYIVVAPDLYSIGGPDD---------------TDE--VASAAEVI 71 (259)
T ss_pred CCcCEEEEeCCcCCCH-HH-----HHHHHHHHHhCceEEEEecccccCCCCc---------------chh--HHHHHHHH
Confidence 5678999999999444 44 2689999999999999999666443211 001 22566667
Q ss_pred HHHHHHh----------C-CcceEEecChhHHHHHHHhcCCCc---ccccchhhcccccc
Q 041488 159 QHVHDQT----------G-QKPHYVGHSLGTLIALASFSKDQP---VNKLRSAALLSPIA 204 (402)
Q Consensus 159 ~~l~~~~----------~-~~~~lvGhS~Gg~~a~~~a~~~p~---~~~v~~~v~~~p~~ 204 (402)
+++.+.+ + .++.+.|||.||-++...+..+-. ..+++++++++|+.
T Consensus 72 ~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 72 DWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 7766532 2 489999999999999988877510 15899999999986
No 113
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.33 E-value=3.6e-12 Score=100.96 Aligned_cols=171 Identities=18% Similarity=0.249 Sum_probs=114.7
Q ss_pred CCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccc--cccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHH
Q 041488 104 QSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFW--DWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLI 180 (402)
Q Consensus 104 ~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~ 180 (402)
+..+..++..||.|+++|+-. |....+. ........| ..+.+ ....|+..++++++.+.. .+|.++|++|||.+
T Consensus 57 r~~Adk~A~~Gy~v~vPD~~~-Gdp~~~~-~~~~~~~~w~~~~~~~-~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~ 133 (242)
T KOG3043|consen 57 REGADKVALNGYTVLVPDFFR-GDPWSPS-LQKSERPEWMKGHSPP-KIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKV 133 (242)
T ss_pred HHHHHHHhcCCcEEEcchhhc-CCCCCCC-CChhhhHHHHhcCCcc-cchhHHHHHHHHHHHcCCcceeeEEEEeecceE
Confidence 467888888999999999743 2111100 000000000 01111 123488999999997765 89999999999999
Q ss_pred HHHHhcCCCcccccchhhcccccccccCCchhHHHHhhhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhh
Q 041488 181 ALASFSKDQPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLL 260 (402)
Q Consensus 181 a~~~a~~~p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 260 (402)
+..+....| .+++.+..-|..- +
T Consensus 134 vv~~~~~~~---~f~a~v~~hps~~-----d------------------------------------------------- 156 (242)
T KOG3043|consen 134 VVTLSAKDP---EFDAGVSFHPSFV-----D------------------------------------------------- 156 (242)
T ss_pred EEEeeccch---hheeeeEecCCcC-----C-------------------------------------------------
Confidence 888877742 5566664433210 0
Q ss_pred hhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCCCccEEEE
Q 041488 261 NSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPHDLPLFLS 340 (402)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~Pvlii 340 (402)
..++.++ .+|+|++
T Consensus 157 ----------------------------------------------------------------~~D~~~v--k~Pilfl 170 (242)
T KOG3043|consen 157 ----------------------------------------------------------------SADIANV--KAPILFL 170 (242)
T ss_pred ----------------------------------------------------------------hhHHhcC--CCCEEEE
Confidence 0013344 6899999
Q ss_pred EeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecc----------cCcchhccHHHHHHHhcC
Q 041488 341 YGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMG----------ENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 341 ~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~----------~~~~~~~~~~i~~fl~~~ 402 (402)
.|+.|.++|++....+.+.+.+......+++++++.+|. +++ ....++.++.+++|++++
T Consensus 171 ~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HG--f~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 171 FAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHG--FVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred eecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccch--hhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998855545679999999997 222 123467788899998764
No 114
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.28 E-value=1.1e-10 Score=96.03 Aligned_cols=116 Identities=16% Similarity=0.085 Sum_probs=75.8
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQ 159 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~ 159 (402)
+.|.||++||.+.+...+... ..+...-.++||.|+.++........+....... .....-++ ...+..+++
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~---s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~---~~~~g~~d--~~~i~~lv~ 86 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAG---SGWNALADREGFIVVYPEQSRRANPQGCWNWFSD---DQQRGGGD--VAFIAALVD 86 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhh---cCHHHHhhcCCeEEEcccccccCCCCCccccccc---ccccCccc--hhhHHHHHH
Confidence 468999999999998876432 1233222256899999996432211110000000 00001111 125778889
Q ss_pred HHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 160 HVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 160 ~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
++..+++ .+|++.|+|.||+.+..++..+| +.+.++...+...+
T Consensus 87 ~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~p--d~faa~a~~sG~~~ 133 (220)
T PF10503_consen 87 YVAARYNIDPSRVYVTGLSNGGMMANVLACAYP--DLFAAVAVVSGVPY 133 (220)
T ss_pred hHhhhcccCCCceeeEEECHHHHHHHHHHHhCC--ccceEEEeeccccc
Confidence 8888887 58999999999999999999988 99999888877654
No 115
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.26 E-value=2.6e-09 Score=95.54 Aligned_cols=250 Identities=11% Similarity=0.146 Sum_probs=124.1
Q ss_pred CCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC--CcceEEecChhHHHH
Q 041488 104 QSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG--QKPHYVGHSLGTLIA 181 (402)
Q Consensus 104 ~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a 181 (402)
..+.-.| ..|+.||.....-.-.... |+++... -..+.++.+.+..+ .+.+|+|.|.||+.+
T Consensus 91 SevG~AL-~~GHPvYFV~F~p~P~pgQ--------------Tl~DV~~-ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~ 154 (581)
T PF11339_consen 91 SEVGVAL-RAGHPVYFVGFFPEPEPGQ--------------TLEDVMR-AEAAFVEEVAERHPDAPKPNLIGNCQGGWAA 154 (581)
T ss_pred cHHHHHH-HcCCCeEEEEecCCCCCCC--------------cHHHHHH-HHHHHHHHHHHhCCCCCCceEEeccHHHHHH
Confidence 3455566 6799999887654322211 6666543 35567777777766 589999999999999
Q ss_pred HHHhcCCCcccccchhhcccccc-cccC--CchhHHHHh---hhhhHHHHHHHhcCCCCCCchHHHHHHHHHhhcCCCCc
Q 041488 182 LASFSKDQPVNKLRSAALLSPIA-YVGQ--MTSPLAKNA---ADNFLAEALYWLGLDEFDPRGEAVVKLLKNICQKPGVD 255 (402)
Q Consensus 182 ~~~a~~~p~~~~v~~~v~~~p~~-~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 255 (402)
+.+|+.+| +.+--+|+.+... ++.. -..++.... ...+...+..-+|...|.. ..+.+.|-+. ......
T Consensus 155 ~mlAA~~P--d~~gplvlaGaPlsywaG~~g~nPmRy~ggl~ggsw~~~l~sDlG~G~fdG-a~lv~nFe~l--nPa~~~ 229 (581)
T PF11339_consen 155 MMLAALRP--DLVGPLVLAGAPLSYWAGERGDNPMRYMGGLLGGSWLTALVSDLGNGRFDG-AWLVQNFENL--NPANTY 229 (581)
T ss_pred HHHHhcCc--CccCceeecCCCcccccCCCCCCcHHHhcCCCcchHHHHHHHHcCCCccCc-HHHHhhhhcc--ChhHHH
Confidence 99999988 8888888765543 3321 222222111 1222233333344333322 1111111110 000111
Q ss_pred hhhhhhhhcCCC-CCCCccccchhcccCCCcchHHHHHHHH-HHHhcCceeeecCCccchhhcccCCCCCCCCCCCCCCC
Q 041488 256 CTNLLNSFTGQN-CCLNSSIVDVFLEHEPQATSTKNMIHVA-QMIREGTIAMYDYNNKEENKKHYGQPNPPLYNMTSIPH 333 (402)
Q Consensus 256 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 333 (402)
+.+.+..+...+ ..-.....++|..... ...-..+.+.. +.+....+..-. .........+|++|
T Consensus 230 w~K~y~Ly~~iD~e~~Rfl~FErWwgg~~-~l~~~ei~~Iv~nLFvgNrL~~g~----------~~~~~G~~~DLr~I-- 296 (581)
T PF11339_consen 230 WSKYYDLYANIDTERERFLEFERWWGGFY-DLNGEEILWIVENLFVGNRLAKGE----------FRVSDGRRVDLRNI-- 296 (581)
T ss_pred HHHHHHHHhccCCchhhhhHHHHHhCCcc-CCCHHHHHHHHHHHhccchhccCc----------eeccCCcEeehhhC--
Confidence 222222222222 0000011111111110 00111111111 111111111111 11112245579999
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHH-ccC-----CCCCceEEEECCCCCccceecccCc
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLES-LND-----HEGDKLVVQYRQDYAHADYVMGENA 387 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~gH~~~~~~~~~ 387 (402)
++|++++.|..|.++||+++..+... .++ ..++...+.+-+..||.+++.+...
T Consensus 297 r~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS~~V 356 (581)
T PF11339_consen 297 RSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVSGKV 356 (581)
T ss_pred CCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEeccHh
Confidence 89999999999999999988443222 222 1222355566789999997765443
No 116
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.25 E-value=7.9e-11 Score=99.15 Aligned_cols=120 Identities=19% Similarity=0.193 Sum_probs=71.8
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHH-hCCC--cEEee--cCCCCcccCCCCC---CCCCC-cccc-c--ccH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLA-DNGY--DVWLA--NTRGTKYSRGHVS---LSPDD-SAFW-D--WTW 146 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~-~~g~--~v~~~--D~rG~G~S~~~~~---~~~~~-~~~~-~--~~~ 146 (402)
....|.||+||++++...+ +.++..+. +.|. .++.. +.-|.=.-.+... ..|-- -.|. . -++
T Consensus 9 ~~~tPTifihG~~gt~~s~------~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~ 82 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSF------NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANY 82 (255)
T ss_dssp -S-EEEEEE--TTGGCCCC------HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHH
T ss_pred cCCCcEEEECCCCCChhHH------HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCH
Confidence 3467999999999999987 78999996 6664 34333 3334321111111 01100 0010 0 134
Q ss_pred HHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCc---ccccchhhccccccc
Q 041488 147 DELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQP---VNKLRSAALLSPIAY 205 (402)
Q Consensus 147 ~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~---~~~v~~~v~~~p~~~ 205 (402)
...+. -+..++.+|.++++ .++.+|||||||..++.|+..+.. ..++.++|.++....
T Consensus 83 ~~qa~-wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 83 KKQAK-WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHH-HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHH-HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 44433 58889999999999 999999999999999998876321 136899999887654
No 117
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.25 E-value=6.7e-11 Score=99.02 Aligned_cols=103 Identities=19% Similarity=0.145 Sum_probs=68.6
Q ss_pred EEEecCccccccccccCCCCCCHHHHHHh-CCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHH
Q 041488 84 VFLQHGLLMDAVTWLLLPPEQSLAFLLAD-NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVH 162 (402)
Q Consensus 84 vll~HG~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~ 162 (402)
||++||.+.....-.. ...+...+++ .|+.|+.+|+|=.... ++.+. .+|+.++++++.
T Consensus 1 v~~~HGGg~~~g~~~~---~~~~~~~la~~~g~~v~~~~Yrl~p~~----------------~~p~~-~~D~~~a~~~l~ 60 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES---HWPFAARLAAERGFVVVSIDYRLAPEA----------------PFPAA-LEDVKAAYRWLL 60 (211)
T ss_dssp EEEE--STTTSCGTTT---HHHHHHHHHHHHTSEEEEEE---TTTS----------------STTHH-HHHHHHHHHHHH
T ss_pred CEEECCcccccCChHH---HHHHHHHHHhhccEEEEEeeccccccc----------------ccccc-ccccccceeeec
Confidence 7999997765432111 1345556664 8999999999963221 33334 348999999999
Q ss_pred HH-----hC-CcceEEecChhHHHHHHHhcCCCcc--cccchhhcccccccc
Q 041488 163 DQ-----TG-QKPHYVGHSLGTLIALASFSKDQPV--NKLRSAALLSPIAYV 206 (402)
Q Consensus 163 ~~-----~~-~~~~lvGhS~Gg~~a~~~a~~~p~~--~~v~~~v~~~p~~~~ 206 (402)
+. .+ ++++++|+|-||.+++.++.+.... ..++++++++|....
T Consensus 61 ~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 61 KNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred cccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 88 44 7999999999999999988653211 258999999996544
No 118
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.22 E-value=6.7e-10 Score=95.69 Aligned_cols=112 Identities=15% Similarity=0.046 Sum_probs=79.6
Q ss_pred CCCCcEEEecCccccccccccCCCCCCH-HHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHH------Hhh
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSL-AFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDE------LVA 151 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~-~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~------~~~ 151 (402)
+.+|.+|.++|.|++.. |.. ..+ +.-|.++|+..+.+..|-||.= ++....-. . -.+..| ...
T Consensus 90 ~~rp~~IhLagTGDh~f-~rR----~~l~a~pLl~~gi~s~~le~Pyyg~R-kP~~Q~~s--~--l~~VsDl~~~g~~~i 159 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGF-WRR----RRLMARPLLKEGIASLILENPYYGQR-KPKDQRRS--S--LRNVSDLFVMGRATI 159 (348)
T ss_pred CCCceEEEecCCCccch-hhh----hhhhhhHHHHcCcceEEEeccccccc-ChhHhhcc--c--ccchhHHHHHHhHHH
Confidence 45899999999999765 322 445 8888889999999999999853 22111000 0 002222 223
Q ss_pred cchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 152 YDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 152 ~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
.+...++.++.++ | .++.+.|.||||.+|..+++..| ..|..+-++++.
T Consensus 160 ~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p--~pv~~vp~ls~~ 209 (348)
T PF09752_consen 160 LESRALLHWLERE-GYGPLGLTGISMGGHMAALAASNWP--RPVALVPCLSWS 209 (348)
T ss_pred HHHHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCC--CceeEEEeeccc
Confidence 3677788888888 8 99999999999999999999987 666666566553
No 119
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.20 E-value=4.8e-10 Score=96.35 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=84.5
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHh---CCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLAD---NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~---~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
+..+||++|.++-..-| ..+...|.+ ..+.|++..+.||-.+....... .+...|++++... --.+.
T Consensus 2 ~~li~~IPGNPGlv~fY------~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~---~~~~~~sL~~QI~-hk~~~ 71 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY------EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS---PNGRLFSLQDQIE-HKIDF 71 (266)
T ss_pred cEEEEEECCCCChHHHH------HHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc---CCCCccCHHHHHH-HHHHH
Confidence 45799999999988865 556666664 47999999999998776532111 1223558877754 34445
Q ss_pred HHHHHHHh--C-CcceEEecChhHHHHHHHhcCCC-cccccchhhccccccccc
Q 041488 158 LQHVHDQT--G-QKPHYVGHSLGTLIALASFSKDQ-PVNKLRSAALLSPIAYVG 207 (402)
Q Consensus 158 v~~l~~~~--~-~~~~lvGhS~Gg~~a~~~a~~~p-~~~~v~~~v~~~p~~~~~ 207 (402)
++.+.... . .+++++|||.|+++++..+.+.+ ...+|.+++++-|.....
T Consensus 72 i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 72 IKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred HHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 55555543 3 78999999999999999999875 235899999999976443
No 120
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.19 E-value=2.5e-10 Score=85.30 Aligned_cols=108 Identities=14% Similarity=0.044 Sum_probs=70.6
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCccc--CCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYS--RGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
...+||+-||.+.+.++=.+ ..++..|+.+|+.|..|+++-.-.- .+....++. . +. .......
T Consensus 13 ~~~tilLaHGAGasmdSt~m----~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~-~-----t~----~~~~~~~ 78 (213)
T COG3571 13 APVTILLAHGAGASMDSTSM----TAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGS-G-----TL----NPEYIVA 78 (213)
T ss_pred CCEEEEEecCCCCCCCCHHH----HHHHHHHHhCceeEEEeecchhhhccccCCCCcCcc-c-----cC----CHHHHHH
Confidence 34579999999988775333 6788899999999999997643211 100000010 0 11 1122334
Q ss_pred HHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 158 LQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 158 v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
+..++..+. .+.++-|+||||-++.+.+..-. ..|+++++++=.
T Consensus 79 ~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~--A~i~~L~clgYP 123 (213)
T COG3571 79 IAQLRAGLAEGPLIIGGKSMGGRVASMVADELQ--APIDGLVCLGYP 123 (213)
T ss_pred HHHHHhcccCCceeeccccccchHHHHHHHhhc--CCcceEEEecCc
Confidence 555666655 69999999999999988877633 568999987633
No 121
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.19 E-value=6.4e-10 Score=86.85 Aligned_cols=107 Identities=14% Similarity=0.140 Sum_probs=74.2
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
...+..||+||.-.-....-.. -.++.-+...||+|...++ +.+.. ..++++... +....+
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~c---lsiv~~a~~~gY~vasvgY---~l~~q------------~htL~qt~~-~~~~gv 125 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMC---LSIVGPAVRRGYRVASVGY---NLCPQ------------VHTLEQTMT-QFTHGV 125 (270)
T ss_pred CCccEEEEEecchhhcCchhcc---cchhhhhhhcCeEEEEecc---CcCcc------------cccHHHHHH-HHHHHH
Confidence 4578999999954322211110 2345555578999998754 44432 115555533 677889
Q ss_pred HHHHHHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 159 QHVHDQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 159 ~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
+++.+.+. +.+.+-|||.|+.+++.+..+-. ..+|.++++++....
T Consensus 126 ~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r-~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 126 NFILKYTENTKVLTFGGHSAGAHLAAQAVMRQR-SPRIWGLILLCGVYD 173 (270)
T ss_pred HHHHHhcccceeEEEcccchHHHHHHHHHHHhc-CchHHHHHHHhhHhh
Confidence 99999888 67889999999999999877631 169999999987653
No 122
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.16 E-value=1.3e-10 Score=100.36 Aligned_cols=100 Identities=23% Similarity=0.199 Sum_probs=72.3
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCC--cccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGT--KYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~--G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
.-|.|++.||.++....+ ..+++.+++.||.|.++|++|. |.......... . |...-+-+. ..|+..+
T Consensus 70 ~~PlvvlshG~Gs~~~~f------~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~--~-~~p~~~~er-p~dis~l 139 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGF------AWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPG--S-YAPAEWWER-PLDISAL 139 (365)
T ss_pred cCCeEEecCCCCCCccch------hhhHHHHhhCceEEEeccCCCcccccCChhhcCCc--c-cchhhhhcc-cccHHHH
Confidence 578999999999998877 7899999999999999999994 33332211100 0 110011111 3388999
Q ss_pred HHHHHHH-----hC-----CcceEEecChhHHHHHHHhcCCC
Q 041488 158 LQHVHDQ-----TG-----QKPHYVGHSLGTLIALASFSKDQ 189 (402)
Q Consensus 158 v~~l~~~-----~~-----~~~~lvGhS~Gg~~a~~~a~~~p 189 (402)
++.+.+. +. .+|.++|||+||+.++..+.-+.
T Consensus 140 Ld~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 140 LDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred HHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccc
Confidence 9988877 22 58999999999999999887654
No 123
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.14 E-value=1e-09 Score=84.11 Aligned_cols=60 Identities=12% Similarity=0.073 Sum_probs=45.5
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHH
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFF 399 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl 399 (402)
..|.+++..++|+.++++.++.+++.+.+ .++.+.++||+.--.......+....+..++
T Consensus 117 pfps~vvaSrnDp~~~~~~a~~~a~~wgs------~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~ 176 (181)
T COG3545 117 PFPSVVVASRNDPYVSYEHAEDLANAWGS------ALVDVGEGGHINAESGFGPWPEGYALLAQLL 176 (181)
T ss_pred CCceeEEEecCCCCCCHHHHHHHHHhccH------hheecccccccchhhcCCCcHHHHHHHHHHh
Confidence 57999999999999999999999999986 7788889999832222334444555555554
No 124
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.11 E-value=6.8e-10 Score=90.40 Aligned_cols=105 Identities=18% Similarity=0.152 Sum_probs=78.0
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
+.-|+|+|+||+.-....| ..+..++++.||-|+++++-.--..+ ..++ .++.+.++
T Consensus 44 G~yPVilF~HG~~l~ns~Y------s~lL~HIASHGfIVVAPQl~~~~~p~---------------~~~E--i~~aa~V~ 100 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFY------SQLLAHIASHGFIVVAPQLYTLFPPD---------------GQDE--IKSAASVI 100 (307)
T ss_pred CCccEEEEeechhhhhHHH------HHHHHHHhhcCeEEEechhhcccCCC---------------chHH--HHHHHHHH
Confidence 5578999999998875544 67888999999999999987521111 1222 23677788
Q ss_pred HHHHHHh----------C-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccc
Q 041488 159 QHVHDQT----------G-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYV 206 (402)
Q Consensus 159 ~~l~~~~----------~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~ 206 (402)
+++.+.+ . .++.++|||.||-.|..+|..+-..-++.++|.++|+...
T Consensus 101 ~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 101 NWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred HHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 8887653 1 4899999999999999988775322479999999998643
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.09 E-value=9.8e-11 Score=97.17 Aligned_cols=50 Identities=20% Similarity=0.277 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccc
Q 041488 154 LPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYV 206 (402)
Q Consensus 154 ~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~ 206 (402)
+..+++++.++.. ++|.++|.|.||-+|+.+|++. ..|+++|.++|....
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~---~~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRF---PQISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS---SSEEEEEEES--SB-
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC---CCccEEEEeCCceeE
Confidence 3467888888755 5899999999999999999997 488999999886543
No 126
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.08 E-value=5.7e-10 Score=87.63 Aligned_cols=101 Identities=20% Similarity=0.187 Sum_probs=77.3
Q ss_pred cEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHH
Q 041488 83 PVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVH 162 (402)
Q Consensus 83 ~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~ 162 (402)
.+||+-|=++-.. . .+.++..|+++|+.|+.+|-+-|=-+.+ |-++.+. |+.+++++-.
T Consensus 4 ~~v~~SGDgGw~~-~-----d~~~a~~l~~~G~~VvGvdsl~Yfw~~r--------------tP~~~a~-Dl~~~i~~y~ 62 (192)
T PF06057_consen 4 LAVFFSGDGGWRD-L-----DKQIAEALAKQGVPVVGVDSLRYFWSER--------------TPEQTAA-DLARIIRHYR 62 (192)
T ss_pred EEEEEeCCCCchh-h-----hHHHHHHHHHCCCeEEEechHHHHhhhC--------------CHHHHHH-HHHHHHHHHH
Confidence 4666666544322 1 2679999999999999999887776665 4445544 8999999999
Q ss_pred HHhC-CcceEEecChhHHHHHHHhcCCCc--ccccchhhcccccc
Q 041488 163 DQTG-QKPHYVGHSLGTLIALASFSKDQP--VNKLRSAALLSPIA 204 (402)
Q Consensus 163 ~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~--~~~v~~~v~~~p~~ 204 (402)
++.+ ++++|+|.|+|+-+......+-|. .++|+.+++++|..
T Consensus 63 ~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 63 ARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 9988 899999999999887776666442 25899999999864
No 127
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.08 E-value=3.8e-10 Score=94.22 Aligned_cols=106 Identities=19% Similarity=0.209 Sum_probs=73.7
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHH--------hCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhh
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLA--------DNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVA 151 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~--------~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~ 151 (402)
.+.||||+||..++...| ++++..+. ...+++++.|+......-. ...+.+...
T Consensus 3 ~g~pVlFIhG~~Gs~~q~------rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~------------g~~l~~q~~ 64 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQV------RSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH------------GRTLQRQAE 64 (225)
T ss_pred CCCEEEEECcCCCCHhHH------HHHHHHHhhhhhhccCccceeEEEeccCccccccc------------cccHHHHHH
Confidence 477999999999988876 56665552 1257899999877532111 013333322
Q ss_pred cchHHHHHHHHHHh-----C-CcceEEecChhHHHHHHHhcCCCc-ccccchhhcccccc
Q 041488 152 YDLPATLQHVHDQT-----G-QKPHYVGHSLGTLIALASFSKDQP-VNKLRSAALLSPIA 204 (402)
Q Consensus 152 ~d~~~~v~~l~~~~-----~-~~~~lvGhS~Gg~~a~~~a~~~p~-~~~v~~~v~~~p~~ 204 (402)
-+...++.+.+.+ + +++++|||||||.++..++...+. ++.|+.+|.++.+-
T Consensus 65 -~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 65 -FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred -HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 4666778887777 3 789999999999999988876432 25799999887654
No 128
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.07 E-value=2.6e-10 Score=102.65 Aligned_cols=116 Identities=18% Similarity=0.252 Sum_probs=62.4
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCC-cccC-C--CC---CCC----CCCc----ccc--
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGT-KYSR-G--HV---SLS----PDDS----AFW-- 142 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~-G~S~-~--~~---~~~----~~~~----~~~-- 142 (402)
+-|+|||.||++++...+ ..+...|+++||-|+++|+|-. +... . .. ... ...+ .+.
T Consensus 99 ~~PvvIFSHGlgg~R~~y------S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSY------SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDF 172 (379)
T ss_dssp -EEEEEEE--TT--TTTT------HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE----
T ss_pred CCCEEEEeCCCCcchhhH------HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccc
Confidence 368999999999999886 6788999999999999999953 2110 0 00 000 0000 000
Q ss_pred ----cccH--H--HHhhcchHHHHHHHHH----------------------HhC-CcceEEecChhHHHHHHHhcCCCcc
Q 041488 143 ----DWTW--D--ELVAYDLPATLQHVHD----------------------QTG-QKPHYVGHSLGTLIALASFSKDQPV 191 (402)
Q Consensus 143 ----~~~~--~--~~~~~d~~~~v~~l~~----------------------~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~ 191 (402)
.+.+ . +....|+..+++.+.+ +++ .++.++|||+||+.++..+.+.
T Consensus 173 ~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d--- 249 (379)
T PF03403_consen 173 DPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD--- 249 (379)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH----
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc---
Confidence 0000 0 1122255566666543 122 4789999999999999988764
Q ss_pred cccchhhcccccc
Q 041488 192 NKLRSAALLSPIA 204 (402)
Q Consensus 192 ~~v~~~v~~~p~~ 204 (402)
.++++.|+++|..
T Consensus 250 ~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 250 TRFKAGILLDPWM 262 (379)
T ss_dssp TT--EEEEES---
T ss_pred cCcceEEEeCCcc
Confidence 7889999888753
No 129
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.06 E-value=5.4e-09 Score=90.99 Aligned_cols=62 Identities=15% Similarity=0.146 Sum_probs=48.7
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
++|++|.||..|.++|+..+..+.+.+......+++++.++..+|..- .-.-....++||..
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~------~~~~~~~a~~Wl~~ 280 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA------AFASAPDALAWLDD 280 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh------hhcCcHHHHHHHHH
Confidence 689999999999999999999999998875524689999999999841 11234566677753
No 130
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.06 E-value=4.3e-09 Score=87.14 Aligned_cols=135 Identities=12% Similarity=-0.004 Sum_probs=76.5
Q ss_pred eEEEEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcc---cC
Q 041488 53 ASVVTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKY---SR 129 (402)
Q Consensus 53 ~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~---S~ 129 (402)
-++.-++-|..|.|+.+-++....+.+--|.|||+||.+..+..-+. .+ ..|.--++.+.+-.++ +.
T Consensus 163 ~~f~d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~---------~l-~sg~gaiawa~pedqcfVlAP 232 (387)
T COG4099 163 VEFYDESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDK---------VL-SSGIGAIAWAGPEDQCFVLAP 232 (387)
T ss_pred eEeeccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhh---------hh-hcCccceeeecccCceEEEcc
Confidence 33355677899999888553221121223889999999887764211 12 2333334444443331 11
Q ss_pred CCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 130 GHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
.....-.++++ -+ +.+...-+..+.+.+.++++ .+|+++|.|+||+-++.++.++| +.+.+.++++.-
T Consensus 233 Qy~~if~d~e~---~t-~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP--dfFAaa~~iaG~ 303 (387)
T COG4099 233 QYNPIFADSEE---KT-LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP--DFFAAAVPIAGG 303 (387)
T ss_pred ccccccccccc---cc-chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc--hhhheeeeecCC
Confidence 00000000000 00 11111122233346667776 58999999999999999999988 999999988764
No 131
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.00 E-value=6.9e-08 Score=84.59 Aligned_cols=230 Identities=16% Similarity=0.080 Sum_probs=129.7
Q ss_pred CCCCcEEEecCccccccc--cccCCCCCCHHHHH-HhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchH
Q 041488 79 GNRLPVFLQHGLLMDAVT--WLLLPPEQSLAFLL-ADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLP 155 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~--~~~~~~~~~~~~~l-~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~ 155 (402)
...|.||++||.|..-.+ +.. +..+-..+ .+.+..|+.+|+|=--+..- |. .+ +|.-
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~---y~~~~~~~a~~~~~vvvSVdYRLAPEh~~-----Pa-------~y-----~D~~ 147 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPA---YDSFCTRLAAELNCVVVSVDYRLAPEHPF-----PA-------AY-----DDGW 147 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCch---hHHHHHHHHHHcCeEEEecCcccCCCCCC-----Cc-------cc-----hHHH
Confidence 468899999997764432 211 24555555 35689999999997332221 11 11 2555
Q ss_pred HHHHHHHHH----h--C-CcceEEecChhHHHHHHHhcCC----CcccccchhhcccccccccCCchhHHHHhhhhhHHH
Q 041488 156 ATLQHVHDQ----T--G-QKPHYVGHSLGTLIALASFSKD----QPVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAE 224 (402)
Q Consensus 156 ~~v~~l~~~----~--~-~~~~lvGhS~Gg~~a~~~a~~~----p~~~~v~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (402)
.++.++.++ + + .+++++|=|-||.+|...+.+. +...++++.|++-|.........+..+....
T Consensus 148 ~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~----- 222 (336)
T KOG1515|consen 148 AALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLN----- 222 (336)
T ss_pred HHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhc-----
Confidence 566666653 2 3 6899999999999998877652 2236899999999987655443332211000
Q ss_pred HHHHhcCCCCCCchHHHHHHHHHhhcCCCCchhhhhhhhcCCCCCCCccccchhcccCCCcchHHHHHHHHHHHhcCcee
Q 041488 225 ALYWLGLDEFDPRGEAVVKLLKNICQKPGVDCTNLLNSFTGQNCCLNSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIA 304 (402)
Q Consensus 225 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (402)
.............|. .... .+. .
T Consensus 223 ------~~~~~~~~~~~~~w~-~~lP-------------------------------------------------~~~-~ 245 (336)
T KOG1515|consen 223 ------GSPELARPKIDKWWR-LLLP-------------------------------------------------NGK-T 245 (336)
T ss_pred ------CCcchhHHHHHHHHH-HhCC-------------------------------------------------CCC-C
Confidence 000000000000011 0000 000 0
Q ss_pred eecCCccchhhcccCCCCCCCCCCCCCCCCc-cEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceec
Q 041488 305 MYDYNNKEENKKHYGQPNPPLYNMTSIPHDL-PLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVM 383 (402)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~-Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 383 (402)
..+.. .-|.... +...+..-. .+ |+|++.++.|.+. +.+..+++++.+.+. .+++..++++.|.-+++
T Consensus 246 ~~~~p--~~np~~~----~~~~d~~~~--~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv-~v~~~~~e~~~H~~~~~ 314 (336)
T KOG1515|consen 246 DLDHP--FINPVGN----SLAKDLSGL--GLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGV-EVTLIHYEDGFHGFHIL 314 (336)
T ss_pred CcCCc--ccccccc----ccccCcccc--CCCceEEEEeCchhhh--hhhHHHHHHHHHcCC-eEEEEEECCCeeEEEec
Confidence 00000 0000000 000111111 33 5999999999876 556778888877554 46677899999986555
Q ss_pred ccC--cchhccHHHHHHHhc
Q 041488 384 GEN--AGQVLYEPLMAFFKL 401 (402)
Q Consensus 384 ~~~--~~~~~~~~i~~fl~~ 401 (402)
... ...++.+.+.+|+.+
T Consensus 315 ~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 315 DPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred CCchhhHHHHHHHHHHHHhh
Confidence 554 667788899999875
No 132
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.98 E-value=2.2e-08 Score=89.07 Aligned_cols=110 Identities=19% Similarity=0.108 Sum_probs=72.9
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
...|+||++||.+-....-.. ....+...+...|+.|+.+|+|-.-+-. +... .+|+.+.+
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~--~~~~~~~~~~~~g~~vv~vdYrlaPe~~----------------~p~~-~~d~~~a~ 137 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRT--HDALVARLAAAAGAVVVSVDYRLAPEHP----------------FPAA-LEDAYAAY 137 (312)
T ss_pred CCCcEEEEEeCCeeeecChhh--hHHHHHHHHHHcCCEEEecCCCCCCCCC----------------CCch-HHHHHHHH
Confidence 458999999997754432111 0123455566789999999999743321 1111 33677788
Q ss_pred HHHHHHh---C---CcceEEecChhHHHHHHHhcCCCc--ccccchhhccccccccc
Q 041488 159 QHVHDQT---G---QKPHYVGHSLGTLIALASFSKDQP--VNKLRSAALLSPIAYVG 207 (402)
Q Consensus 159 ~~l~~~~---~---~~~~lvGhS~Gg~~a~~~a~~~p~--~~~v~~~v~~~p~~~~~ 207 (402)
.++.++. + ++|.++|+|-||.+++.++..-.. .....+.+++.|.....
T Consensus 138 ~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 138 RWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred HHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 8887653 3 689999999999999998765221 12567888888875433
No 133
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.97 E-value=2e-09 Score=88.48 Aligned_cols=90 Identities=30% Similarity=0.298 Sum_probs=57.9
Q ss_pred CcEEEecCccc-cccccccCCCCCCHHHHHHhCCCc---EEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 82 LPVFLQHGLLM-DAVTWLLLPPEQSLAFLLADNGYD---VWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 82 ~~vll~HG~~~-~~~~~~~~~~~~~~~~~l~~~g~~---v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
.||||+||.+. ....| ..++.+|.++||. |+++++-....+..... ..... +.+ .++.++
T Consensus 2 ~PVVlVHG~~~~~~~~w------~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~--------~~~~~-~~~-~~l~~f 65 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNW------STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQN--------AHMSC-ESA-KQLRAF 65 (219)
T ss_dssp --EEEE--TTTTTCGGC------CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHH--------HHB-H-HHH-HHHHHH
T ss_pred CCEEEECCCCcchhhCH------HHHHHHHHHcCCCcceeEeccCCCCCCCCcccc--------cccch-hhH-HHHHHH
Confidence 48999999999 55678 7899999999999 89999965443221000 00011 222 378899
Q ss_pred HHHHHHHhCCcceEEecChhHHHHHHHhcC
Q 041488 158 LQHVHDQTGQKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 158 v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
|+.+++..|.++-+|||||||.++..|...
T Consensus 66 I~~Vl~~TGakVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 66 IDAVLAYTGAKVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHT--EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHhhCCEEEEEEcCCcCHHHHHHHHH
Confidence 999999988999999999999999888764
No 134
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.95 E-value=8.3e-10 Score=91.85 Aligned_cols=122 Identities=15% Similarity=0.120 Sum_probs=55.8
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCc-----ccCCC------CCCCCCCcccccccHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTK-----YSRGH------VSLSPDDSAFWDWTWDE 148 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G-----~S~~~------~~~~~~~~~~~~~~~~~ 148 (402)
.++.||++||++.|+..+..+. ..+...|.+.+++.+.+|-|--- ...-. .......-.+|...-++
T Consensus 3 ~k~riLcLHG~~~na~if~~q~--~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQT--SALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHT--HHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCcCHHHHHHHH--HHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 3678999999999999874433 34566664438999998865321 11000 00000001122211111
Q ss_pred HhhcchHHHHHHHHHHhC--Cc-ceEEecChhHHHHHHHhcCCC------cccccchhhccccc
Q 041488 149 LVAYDLPATLQHVHDQTG--QK-PHYVGHSLGTLIALASFSKDQ------PVNKLRSAALLSPI 203 (402)
Q Consensus 149 ~~~~d~~~~v~~l~~~~~--~~-~~lvGhS~Gg~~a~~~a~~~p------~~~~v~~~v~~~p~ 203 (402)
....++...++++.+... .+ ..++|+|+||.+|..++.... ....++.+|++++.
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~ 144 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGF 144 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES--
T ss_pred ccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEccc
Confidence 222356666777766555 34 569999999999998876421 01245667766654
No 135
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.94 E-value=1.8e-08 Score=80.34 Aligned_cols=57 Identities=18% Similarity=0.251 Sum_probs=46.9
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
++|.|.|.|+.|.++|...+..+++.+++ . .++.-.+||+ + .......+.|.+||+.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~~-----a-~vl~HpggH~---V--P~~~~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFKD-----A-TVLEHPGGHI---V--PNKAKYKEKIADFIQS 219 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcCC-----C-eEEecCCCcc---C--CCchHHHHHHHHHHHH
Confidence 79999999999999999999999999998 4 3444568998 3 3445788889998863
No 136
>PRK04940 hypothetical protein; Provisional
Probab=98.88 E-value=5.5e-08 Score=76.48 Aligned_cols=54 Identities=13% Similarity=0.141 Sum_probs=41.2
Q ss_pred cEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 336 PLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 336 Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
..+++..+.|.+.+...+... +.+ ..+..+.+|++|. + ..-++..+.|++|+.+
T Consensus 126 r~~vllq~gDEvLDyr~a~~~---y~~----~y~~~v~~GGdH~---f--~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAEE---LHP----YYEIVWDEEQTHK---F--KNISPHLQRIKAFKTL 179 (180)
T ss_pred cEEEEEeCCCcccCHHHHHHH---hcc----CceEEEECCCCCC---C--CCHHHHHHHHHHHHhc
Confidence 469999999999998766444 444 1367888999997 2 5667789999999864
No 137
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.87 E-value=3.7e-07 Score=80.07 Aligned_cols=140 Identities=15% Similarity=0.126 Sum_probs=81.5
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCC--CcccCCCC-
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRG--TKYSRGHV- 132 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG--~G~S~~~~- 132 (402)
+...+...+.+++-.... ...+.||++||.+.+.+ |.... ..+-..|.+.|+.++.+-++. ...+....
T Consensus 67 L~~~~~~flaL~~~~~~~-----~~~G~vIilp~~g~~~d-~p~~i--~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~ 138 (310)
T PF12048_consen 67 LQAGEERFLALWRPANSA-----KPQGAVIILPDWGEHPD-WPGLI--APLRRELPDHGWATLSITLPDPAPPASPNRAT 138 (310)
T ss_pred eecCCEEEEEEEecccCC-----CCceEEEEecCCCCCCC-cHhHH--HHHHHHhhhcCceEEEecCCCcccccCCccCC
Confidence 444444445554433332 55789999999999886 31111 456777888999999988887 11100000
Q ss_pred -----------CCCCCCcc---------cccccHHHHhhcchHHHHHHHHHHhCCcceEEecChhHHHHHHHhcCCCccc
Q 041488 133 -----------SLSPDDSA---------FWDWTWDELVAYDLPATLQHVHDQTGQKPHYVGHSLGTLIALASFSKDQPVN 192 (402)
Q Consensus 133 -----------~~~~~~~~---------~~~~~~~~~~~~d~~~~v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~ 192 (402)
..+....+ -..-...+....-+.+++.++.+.-+.+++|+||+.|+..+..+++..+ ..
T Consensus 139 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~-~~ 217 (310)
T PF12048_consen 139 EAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKP-PP 217 (310)
T ss_pred CCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCC-Cc
Confidence 00000000 0000111121223455555554443366999999999999999998865 24
Q ss_pred ccchhhcccccc
Q 041488 193 KLRSAALLSPIA 204 (402)
Q Consensus 193 ~v~~~v~~~p~~ 204 (402)
.++++|++++..
T Consensus 218 ~~daLV~I~a~~ 229 (310)
T PF12048_consen 218 MPDALVLINAYW 229 (310)
T ss_pred ccCeEEEEeCCC
Confidence 689999999853
No 138
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.87 E-value=1e-06 Score=81.83 Aligned_cols=134 Identities=16% Similarity=0.058 Sum_probs=82.2
Q ss_pred CCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccC---CCCC------CHHH---HHHhCCCcEEeecC-CCCc
Q 041488 60 DGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLL---PPEQ------SLAF---LLADNGYDVWLANT-RGTK 126 (402)
Q Consensus 60 dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~---~~~~------~~~~---~l~~~g~~v~~~D~-rG~G 126 (402)
.+.++.+|.+.... .....|.||+++|.++++..+... .|.+ .+.. .+ .+-..|+.+|. +|+|
T Consensus 59 ~~~~lFyw~~~s~~---~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW-~~~~~~l~iDqP~G~G 134 (462)
T PTZ00472 59 TDKHYFYWAFGPRN---GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSW-NNEAYVIYVDQPAGVG 134 (462)
T ss_pred CCceEEEEEEEcCC---CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccc-ccccCeEEEeCCCCcC
Confidence 36789999886543 345689999999998887654110 0100 0000 11 12357888996 5999
Q ss_pred ccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC----CcceEEecChhHHHHHHHhcC----CC----ccccc
Q 041488 127 YSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG----QKPHYVGHSLGTLIALASFSK----DQ----PVNKL 194 (402)
Q Consensus 127 ~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~----~p----~~~~v 194 (402)
.|...... + ..+.++.+ +|+..+++.+.++++ .+++++|||+||..+..+|.+ .. ..-.+
T Consensus 135 ~S~~~~~~------~-~~~~~~~a-~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inL 206 (462)
T PTZ00472 135 FSYADKAD------Y-DHNESEVS-EDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINL 206 (462)
T ss_pred cccCCCCC------C-CCChHHHH-HHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeee
Confidence 98753211 1 11334443 377777776665544 589999999999988776654 10 01257
Q ss_pred chhhccccccc
Q 041488 195 RSAALLSPIAY 205 (402)
Q Consensus 195 ~~~v~~~p~~~ 205 (402)
+++++-++...
T Consensus 207 kGi~IGNg~~d 217 (462)
T PTZ00472 207 AGLAVGNGLTD 217 (462)
T ss_pred EEEEEeccccC
Confidence 88887777553
No 139
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.85 E-value=4.7e-08 Score=89.98 Aligned_cols=131 Identities=20% Similarity=0.145 Sum_probs=92.9
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHH---HHHhCCCcEEeecCCCCcccCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAF---LLADNGYDVWLANTRGTKYSRGHV 132 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~---~l~~~g~~v~~~D~rG~G~S~~~~ 132 (402)
++..||++|....+-+.+ .++.|+++..+=++-..+.+.. +....... .++.+||.|+..|.||.|.|++..
T Consensus 24 V~MRDGvrL~~dIy~Pa~----~g~~Pvll~~~~~Py~k~~~~~-~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 24 VPMRDGVRLAADIYRPAG----AGPLPVLLSRTRLPYRKRNGTF-GPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred EEecCCeEEEEEEEccCC----CCCCceeEEeeccccccccccC-cchhhcccccceeecCceEEEEecccccccCCccc
Confidence 999999999999885542 1667888888822222221111 00122223 577899999999999999999843
Q ss_pred CCCCCCcccccccHHHHhhcchHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 133 SLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
...- + . ...|-.+.|++|.++.- +++..+|.|++|...+.+|+..| ..+++++-..+..
T Consensus 99 ~~~~--------~-~--E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~p--PaLkai~p~~~~~ 159 (563)
T COG2936 99 DPES--------S-R--EAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQP--PALKAIAPTEGLV 159 (563)
T ss_pred ceec--------c-c--cccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCC--chheeeccccccc
Confidence 2110 1 1 23488889999998755 79999999999999999999977 7778887665544
No 140
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.80 E-value=1.3e-07 Score=76.56 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=77.6
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhC---CCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADN---GYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLP 155 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~---g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~ 155 (402)
..++.|+++.|.+++...| ..++..|... .+.||.+-..||-.-..+..-+.+...-..|++++. +.
T Consensus 27 ~~~~li~~IpGNPG~~gFY------~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~Q----V~ 96 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFY------TEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQ----VD 96 (301)
T ss_pred CCceEEEEecCCCCchhHH------HHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhH----HH
Confidence 4578899999999998866 5677766543 256898888888654311111111111113355444 44
Q ss_pred HHHHHHHHHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 156 ATLQHVHDQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 156 ~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
.-++++.+..+ .+++++|||-|+++.+...-.....-.|.+++++=|..
T Consensus 97 HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 97 HKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred HHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 66788888877 68999999999999999876432235788888887744
No 141
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.79 E-value=7.6e-09 Score=94.35 Aligned_cols=88 Identities=20% Similarity=0.215 Sum_probs=69.5
Q ss_pred CCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHH
Q 041488 104 QSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIAL 182 (402)
Q Consensus 104 ~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~ 182 (402)
..++..|.+.||.+ ..|++|+|.+.+... ..+++. .++.+.++.+.+..+ .+++++||||||.++.
T Consensus 111 ~~li~~L~~~GY~~-~~dL~g~gYDwR~~~-----------~~~~~~-~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 111 HDMIEQLIKWGYKE-GKTLFGFGYDFRQSN-----------RLPETM-DGLKKKLETVYKASGGKKVNIISHSMGGLLVK 177 (440)
T ss_pred HHHHHHHHHcCCcc-CCCcccCCCCccccc-----------cHHHHH-HHHHHHHHHHHHHcCCCCEEEEEECHhHHHHH
Confidence 67889999999866 899999999876321 233443 478899999988888 8999999999999999
Q ss_pred HHhcCCCcc--cccchhhcccccc
Q 041488 183 ASFSKDQPV--NKLRSAALLSPIA 204 (402)
Q Consensus 183 ~~a~~~p~~--~~v~~~v~~~p~~ 204 (402)
.++..+|.. ..|+++|.+++..
T Consensus 178 ~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 178 CFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHHCCHhHHhHhccEEEECCCC
Confidence 999887621 3478888887753
No 142
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.78 E-value=3.2e-08 Score=78.44 Aligned_cols=58 Identities=19% Similarity=0.194 Sum_probs=44.3
Q ss_pred ccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHh
Q 041488 335 LPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 400 (402)
Q Consensus 335 ~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~ 400 (402)
.|++..||+.|++||....+...+.+...... .+++.|++-+|.. .++ =.+.+..|++
T Consensus 145 ~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~-~~f~~y~g~~h~~------~~~-e~~~~~~~~~ 202 (206)
T KOG2112|consen 145 TPILLCHGTADPLVPFRFGEKSAQFLKSLGVR-VTFKPYPGLGHST------SPQ-ELDDLKSWIK 202 (206)
T ss_pred chhheecccCCceeehHHHHHHHHHHHHcCCc-eeeeecCCccccc------cHH-HHHHHHHHHH
Confidence 69999999999999998888777777664443 8999999999982 222 2455666665
No 143
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=98.77 E-value=2.1e-08 Score=64.23 Aligned_cols=55 Identities=44% Similarity=0.793 Sum_probs=35.7
Q ss_pred CCCCCCcceEE-EEcCCCcEEEEEEecCCC-CCCCCCCCCcEEEecCcccccccccc
Q 041488 45 AASDDGICASV-VTTKDGYILSMQRIPVGR-SGGEPGNRLPVFLQHGLLMDAVTWLL 99 (402)
Q Consensus 45 ~~~~~~~~~~~-~~~~dG~~l~~~~~~~~~-~~~~~~~~~~vll~HG~~~~~~~~~~ 99 (402)
....+++.|++ ++|+||+.|.+++++.++ .......++||+|.||+.+++..|..
T Consensus 5 i~~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv~ 61 (63)
T PF04083_consen 5 IEKHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWVL 61 (63)
T ss_dssp HHHTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGCS
T ss_pred HHHcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHHc
Confidence 35678999999 999999999999998765 23344568999999999999999954
No 144
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.74 E-value=1.7e-07 Score=99.79 Aligned_cols=99 Identities=19% Similarity=0.154 Sum_probs=74.3
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQH 160 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~ 160 (402)
+++++++||++++...| ..++..| ..+++|+++|.+|+|.+... .+++++++. ++.+.
T Consensus 1068 ~~~l~~lh~~~g~~~~~------~~l~~~l-~~~~~v~~~~~~g~~~~~~~-----------~~~l~~la~-~~~~~--- 1125 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQF------SVLSRYL-DPQWSIYGIQSPRPDGPMQT-----------ATSLDEVCE-AHLAT--- 1125 (1296)
T ss_pred CCCeEEecCCCCchHHH------HHHHHhc-CCCCcEEEEECCCCCCCCCC-----------CCCHHHHHH-HHHHH---
Confidence 57899999999999888 6788777 56799999999999865321 236666654 33333
Q ss_pred HHHHhC-CcceEEecChhHHHHHHHhcC---CCcccccchhhccccc
Q 041488 161 VHDQTG-QKPHYVGHSLGTLIALASFSK---DQPVNKLRSAALLSPI 203 (402)
Q Consensus 161 l~~~~~-~~~~lvGhS~Gg~~a~~~a~~---~p~~~~v~~~v~~~p~ 203 (402)
+....+ ++++++||||||.++..++.+ .+ .++..++++++.
T Consensus 1126 i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~--~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1126 LLEQQPHGPYHLLGYSLGGTLAQGIAARLRARG--EEVAFLGLLDTW 1170 (1296)
T ss_pred HHhhCCCCCEEEEEechhhHHHHHHHHHHHHcC--CceeEEEEecCC
Confidence 322233 589999999999999999875 34 788888888764
No 145
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.71 E-value=7.9e-07 Score=72.39 Aligned_cols=118 Identities=17% Similarity=0.101 Sum_probs=75.9
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCC-----CcEEeecCCCCcccCCCCCC---CCC-Cccc--ccccHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNG-----YDVWLANTRGTKYSRGHVSL---SPD-DSAF--WDWTWDEL 149 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g-----~~v~~~D~rG~G~S~~~~~~---~~~-~~~~--~~~~~~~~ 149 (402)
.-|.||+||++++..+. ..++..|...+ --++..|--|.=...+.-.. .|- .-.+ ..-+..++
T Consensus 45 ~iPTIfIhGsgG~asS~------~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~ 118 (288)
T COG4814 45 AIPTIFIHGSGGTASSL------NGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQ 118 (288)
T ss_pred ccceEEEecCCCChhHH------HHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhH
Confidence 56899999999999887 67787776544 12566666662111111110 010 0000 01134444
Q ss_pred hhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCc---ccccchhhccccccc
Q 041488 150 VAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQP---VNKLRSAALLSPIAY 205 (402)
Q Consensus 150 ~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~---~~~v~~~v~~~p~~~ 205 (402)
+. -+..++.+|.++++ +++.+|||||||.-...|+..... -..++.+|.++...+
T Consensus 119 s~-wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 119 SK-WLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HH-HHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 33 47788899999999 999999999999999998876321 135788888876654
No 146
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.68 E-value=2.7e-07 Score=78.91 Aligned_cols=117 Identities=20% Similarity=0.212 Sum_probs=84.0
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccC-CCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLL-PPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSL 134 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~-~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~ 134 (402)
....||..+....+..++ ..+..-||+.-|.++.-+..... .....+.....+.|-+|+.+++||.|.|.+..
T Consensus 116 ~Iq~D~~~IDt~~I~~~~----a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-- 189 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPE----AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-- 189 (365)
T ss_pred EEeeCCEEEEEEEeeCCC----CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--
Confidence 445699999988886432 14567899999988766652110 01123333344568999999999999998743
Q ss_pred CCCCcccccccHHHHhhcchHHHHHHHHHHh-C---CcceEEecChhHHHHHHHhcCCC
Q 041488 135 SPDDSAFWDWTWDELVAYDLPATLQHVHDQT-G---QKPHYVGHSLGTLIALASFSKDQ 189 (402)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~-~---~~~~lvGhS~Gg~~a~~~a~~~p 189 (402)
+.+++.. |..+++++++++. | ++|++.|||+||.++..++..+.
T Consensus 190 ----------s~~dLv~-~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 190 ----------SRKDLVK-DYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred ----------CHHHHHH-HHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 4456644 8999999999754 3 68999999999999998877753
No 147
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.61 E-value=2.2e-08 Score=88.34 Aligned_cols=111 Identities=19% Similarity=0.235 Sum_probs=66.4
Q ss_pred CCCCCcEEEecCccccc--cccccCCCCCCHHHHHHh---CCCcEEeecCCCCcccCCCCCCCCCCccccc--ccHHHHh
Q 041488 78 PGNRLPVFLQHGLLMDA--VTWLLLPPEQSLAFLLAD---NGYDVWLANTRGTKYSRGHVSLSPDDSAFWD--WTWDELV 150 (402)
Q Consensus 78 ~~~~~~vll~HG~~~~~--~~~~~~~~~~~~~~~l~~---~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~--~~~~~~~ 150 (402)
+..+|++|++|||.++. ..|. ..+...+.+ .+++|+++||... +.. .|.. ......
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~-----~~~~~all~~~~~d~NVI~VDWs~~--a~~---------~Y~~a~~n~~~v- 130 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWI-----QDMIKALLQKDTGDYNVIVVDWSRG--ASN---------NYPQAVANTRLV- 130 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHH-----HHHHHHHHCC--S-EEEEEEE-HHH--HSS----------HHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHH-----HHHHHHHHhhccCCceEEEEcchhh--ccc---------cccchhhhHHHH-
Confidence 35689999999999998 3563 244454444 4799999999752 221 1100 011122
Q ss_pred hcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 151 AYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 151 ~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
-..++.++..|....+ +++++||||+||.++..+..+-....+|..++.++|+.-
T Consensus 131 g~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 131 GRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 2256666777775555 799999999999999988877541238999999999864
No 148
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.61 E-value=4.3e-08 Score=82.39 Aligned_cols=112 Identities=19% Similarity=0.218 Sum_probs=72.6
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCC--cEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGY--DVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPA 156 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~--~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 156 (402)
..+..+||+||+..+-..-. ...++.....++ .++++.||+.|.-.+... + . .-...+..++..
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~-----~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~---d-~-----~~a~~s~~~l~~ 81 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDAL-----RRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY---D-R-----ESARFSGPALAR 81 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHH-----HHHHHHHHHhCCCceEEEEEcCCCCChhhhhh---h-h-----hhHHHHHHHHHH
Confidence 45779999999988755321 234443334444 699999999875321100 0 0 111123346777
Q ss_pred HHHHHHHHhC-CcceEEecChhHHHHHHHhcC----CCc---ccccchhhcccccc
Q 041488 157 TLQHVHDQTG-QKPHYVGHSLGTLIALASFSK----DQP---VNKLRSAALLSPIA 204 (402)
Q Consensus 157 ~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~----~p~---~~~v~~~v~~~p~~ 204 (402)
+++.+.+..+ .+|++++||||+.+.+.++.. .+. ..++..+|+.+|-.
T Consensus 82 ~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 82 FLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred HHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 7888877766 899999999999999887654 211 13678888888754
No 149
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.60 E-value=1.5e-07 Score=79.68 Aligned_cols=123 Identities=17% Similarity=0.052 Sum_probs=87.2
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
+.+.||..|....+.... .+.++.+..||+.-|..+-...- ...--++.||.|+-+++||++.|.+.+...
T Consensus 219 iks~dgneiDtmF~d~r~-n~~~ngq~LvIC~EGNAGFYEvG--------~m~tP~~lgYsvLGwNhPGFagSTG~P~p~ 289 (517)
T KOG1553|consen 219 IKSSDGNEIDTMFLDGRP-NQSGNGQDLVICFEGNAGFYEVG--------VMNTPAQLGYSVLGWNHPGFAGSTGLPYPV 289 (517)
T ss_pred EeecCCcchhheeecCCC-CCCCCCceEEEEecCCccceEee--------eecChHHhCceeeccCCCCccccCCCCCcc
Confidence 788888888877664321 01223356788888866543322 122233689999999999999999855422
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
. +. .-+.+++++..+.+| +.|++.|||.||..+..+|+.+| .|+++|+.+..
T Consensus 290 n-----------~~--nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YP---dVkavvLDAtF 344 (517)
T KOG1553|consen 290 N-----------TL--NAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYP---DVKAVVLDATF 344 (517)
T ss_pred c-----------ch--HHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCC---CceEEEeecch
Confidence 1 11 134577899999888 68999999999999999999875 57888887764
No 150
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.52 E-value=1.7e-07 Score=78.94 Aligned_cols=102 Identities=18% Similarity=0.157 Sum_probs=77.6
Q ss_pred CcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHH
Q 041488 82 LPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHV 161 (402)
Q Consensus 82 ~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l 161 (402)
++++++||.++....| ..++..|. .-..|+..+.||.|.-.... -++++++. ..++.|
T Consensus 1 ~pLF~fhp~~G~~~~~------~~L~~~l~-~~~~v~~l~a~g~~~~~~~~-----------~~l~~~a~----~yv~~I 58 (257)
T COG3319 1 PPLFCFHPAGGSVLAY------APLAAALG-PLLPVYGLQAPGYGAGEQPF-----------ASLDDMAA----AYVAAI 58 (257)
T ss_pred CCEEEEcCCCCcHHHH------HHHHHHhc-cCceeeccccCccccccccc-----------CCHHHHHH----HHHHHH
Confidence 5899999999999887 66888884 44999999999998533211 16666654 456667
Q ss_pred HHHhC-CcceEEecChhHHHHHHHhcCC-Ccccccchhhccccccc
Q 041488 162 HDQTG-QKPHYVGHSLGTLIALASFSKD-QPVNKLRSAALLSPIAY 205 (402)
Q Consensus 162 ~~~~~-~~~~lvGhS~Gg~~a~~~a~~~-p~~~~v~~~v~~~p~~~ 205 (402)
++.-+ ++.+|+|||+||.+|...|.+= ...+.|..++++++...
T Consensus 59 r~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 59 RRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 76666 8999999999999999988761 11257899999988754
No 151
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.52 E-value=5.1e-06 Score=76.00 Aligned_cols=108 Identities=19% Similarity=0.136 Sum_probs=64.5
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCC----cEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcch
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGY----DVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDL 154 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~----~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~ 154 (402)
.+.|+|+|+||-. |.....-......|.++|. .|+.+|..+ + ..+.... +... .+.++. .
T Consensus 207 ~~~PvlyllDG~~-----w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~-~-~~R~~el-~~~~-----~f~~~l---~ 270 (411)
T PRK10439 207 EERPLAILLDGQF-----WAESMPVWPALDSLTHRGQLPPAVYLLIDAID-T-THRSQEL-PCNA-----DFWLAV---Q 270 (411)
T ss_pred CCCCEEEEEECHH-----hhhcCCHHHHHHHHHHcCCCCceEEEEECCCC-c-ccccccC-CchH-----HHHHHH---H
Confidence 4578999999954 2211111234445556663 357777532 1 1111111 1101 122222 2
Q ss_pred HHHHHHHHHHhC-----CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 155 PATLQHVHDQTG-----QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 155 ~~~v~~l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
.+++-+|.+.++ ++.+++|+||||..++.++.++| +.+.+++..++..
T Consensus 271 ~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~P--d~Fg~v~s~Sgs~ 323 (411)
T PRK10439 271 QELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWP--ERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCc--ccccEEEEeccce
Confidence 344555655544 46899999999999999999988 9999999999864
No 152
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.45 E-value=1.8e-05 Score=63.23 Aligned_cols=105 Identities=21% Similarity=0.200 Sum_probs=76.6
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCC----CcccCCCCCCCCCCcccccccHHHHhhcchHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRG----TKYSRGHVSLSPDDSAFWDWTWDELVAYDLPA 156 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG----~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 156 (402)
+.-|||+-|+++.--.-. +...++.+|.+.+|.++-+-++. +|.+ ++.+- .+|+..
T Consensus 36 ~~~vvfiGGLgdgLl~~~---y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~----------------slk~D-~edl~~ 95 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICL---YTTMLNRYLDENSWSLVQPQLRSSYNGYGTF----------------SLKDD-VEDLKC 95 (299)
T ss_pred EEEEEEEcccCCCccccc---cHHHHHHHHhhccceeeeeeccccccccccc----------------ccccc-HHHHHH
Confidence 456999999888654321 12568889999999999998774 4433 33322 337888
Q ss_pred HHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 157 TLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 157 ~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
++++|...-. .+++|+|||.|+.-.++|+...-.+..|++.|+.+|+..
T Consensus 96 l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 96 LLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred HHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 8887655433 699999999999999999854323378999999999864
No 153
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.40 E-value=1.6e-06 Score=72.84 Aligned_cols=44 Identities=20% Similarity=0.217 Sum_probs=36.8
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCccc
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYS 128 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S 128 (402)
.+-|+|||.||++++...| ..+--.|++.||-|.++++|-+..+
T Consensus 116 ~k~PvvvFSHGLggsRt~Y------Sa~c~~LAShG~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLY------SAYCTSLASHGFVVAAVEHRDRSAC 159 (399)
T ss_pred CCccEEEEecccccchhhH------HHHhhhHhhCceEEEEeecccCcce
Confidence 4568999999999998876 5566688999999999999986543
No 154
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.33 E-value=2.8e-06 Score=70.80 Aligned_cols=84 Identities=26% Similarity=0.173 Sum_probs=55.8
Q ss_pred CCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHH
Q 041488 104 QSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIAL 182 (402)
Q Consensus 104 ~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~ 182 (402)
..++..|. .++.|+++|.+|+|.+..... +++++.. ..++.+....+ .+++++|||+||.++.
T Consensus 16 ~~~~~~l~-~~~~v~~~~~~g~~~~~~~~~-----------~~~~~~~----~~~~~l~~~~~~~~~~l~g~s~Gg~~a~ 79 (212)
T smart00824 16 ARLAAALR-GRRDVSALPLPGFGPGEPLPA-----------SADALVE----AQAEAVLRAAGGRPFVLVGHSSGGLLAH 79 (212)
T ss_pred HHHHHhcC-CCccEEEecCCCCCCCCCCCC-----------CHHHHHH----HHHHHHHHhcCCCCeEEEEECHHHHHHH
Confidence 55666673 568999999999986653211 3333322 23344445455 7899999999999998
Q ss_pred HHhcCCC-cccccchhhccccc
Q 041488 183 ASFSKDQ-PVNKLRSAALLSPI 203 (402)
Q Consensus 183 ~~a~~~p-~~~~v~~~v~~~p~ 203 (402)
..+.+.. ....+.+++++++.
T Consensus 80 ~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 80 AVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHhCCCCCcEEEEEccC
Confidence 8776521 11567888877654
No 155
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.32 E-value=2.2e-05 Score=72.12 Aligned_cols=144 Identities=18% Similarity=0.108 Sum_probs=93.0
Q ss_pred CCCCCcceEE-EEcCCCcEEEEEEecCC-CCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC
Q 041488 46 ASDDGICASV-VTTKDGYILSMQRIPVG-RSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR 123 (402)
Q Consensus 46 ~~~~~~~~~~-~~~~dG~~l~~~~~~~~-~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r 123 (402)
...++..+.. .++.||.+|.|-.+..+ + . .+.|++|.-.|...-+.+ +.+ ........++|...+..+.|
T Consensus 388 Da~~~~veQ~~atSkDGT~IPYFiv~K~~~---~-d~~pTll~aYGGF~vslt--P~f--s~~~~~WLerGg~~v~ANIR 459 (648)
T COG1505 388 DADNYEVEQFFATSKDGTRIPYFIVRKGAK---K-DENPTLLYAYGGFNISLT--PRF--SGSRKLWLERGGVFVLANIR 459 (648)
T ss_pred CccCceEEEEEEEcCCCccccEEEEecCCc---C-CCCceEEEeccccccccC--Ccc--chhhHHHHhcCCeEEEEecc
Confidence 3445666666 67899999999888621 1 1 246676666554444332 211 22225566899999999999
Q ss_pred CCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhcc
Q 041488 124 GTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALL 200 (402)
Q Consensus 124 G~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~ 200 (402)
|-|+=........ ..+ + .+-..+|..++.+.+.++-- +++.+.|-|=||.++..++.++| +.+.++|+-
T Consensus 460 GGGEfGp~WH~Aa-~k~----n-rq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrP--elfgA~v~e 531 (648)
T COG1505 460 GGGEFGPEWHQAG-MKE----N-KQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRP--ELFGAAVCE 531 (648)
T ss_pred cCCccCHHHHHHH-hhh----c-chhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccCh--hhhCceeec
Confidence 9775432100000 000 0 01112377788888887632 58999999999999999999988 999999977
Q ss_pred ccccc
Q 041488 201 SPIAY 205 (402)
Q Consensus 201 ~p~~~ 205 (402)
-|...
T Consensus 532 vPllD 536 (648)
T COG1505 532 VPLLD 536 (648)
T ss_pred cchhh
Confidence 77654
No 156
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.30 E-value=4.3e-06 Score=76.35 Aligned_cols=42 Identities=14% Similarity=0.302 Sum_probs=39.7
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCcc
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHA 379 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 379 (402)
..|+||+.|..|..+++...+.+.+++.. ..+++++.+++|.
T Consensus 304 k~PVLFV~Gsnd~mcspn~ME~vreKMqA----~~elhVI~~adhs 345 (784)
T KOG3253|consen 304 KQPVLFVIGSNDHMCSPNSMEEVREKMQA----EVELHVIGGADHS 345 (784)
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHhhc----cceEEEecCCCcc
Confidence 68999999999999999999999999987 6899999999997
No 157
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.26 E-value=1.8e-06 Score=74.51 Aligned_cols=112 Identities=14% Similarity=0.105 Sum_probs=75.2
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCC--CcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNG--YDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPA 156 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g--~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 156 (402)
..+.++||+||+..+-..= -...++...+.| ...+.+-||.-|.--+.. .++ .-..++..+++.
T Consensus 114 ~~k~vlvFvHGfNntf~da-----v~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn----~Dr-----eS~~~Sr~aLe~ 179 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDA-----VYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYN----YDR-----ESTNYSRPALER 179 (377)
T ss_pred CCCeEEEEEcccCCchhHH-----HHHHHHHHhhcCCCcceEEEEcCCCCeeeecc----cch-----hhhhhhHHHHHH
Confidence 3477999999987654321 034555555555 457889999876422100 000 112244558889
Q ss_pred HHHHHHHHhC-CcceEEecChhHHHHHHHhcC----C--Ccccccchhhcccccc
Q 041488 157 TLQHVHDQTG-QKPHYVGHSLGTLIALASFSK----D--QPVNKLRSAALLSPIA 204 (402)
Q Consensus 157 ~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~----~--p~~~~v~~~v~~~p~~ 204 (402)
++.+|.+..+ ++|++++||||.++++..+.+ . |.+.+|+-+|+.+|-.
T Consensus 180 ~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 180 LLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred HHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 9999999888 899999999999999886542 2 2335788888888854
No 158
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.26 E-value=6.8e-06 Score=68.97 Aligned_cols=132 Identities=17% Similarity=0.111 Sum_probs=82.6
Q ss_pred CCCcEEEEEEe-cCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC-CCcccC-CCCCCC
Q 041488 59 KDGYILSMQRI-PVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR-GTKYSR-GHVSLS 135 (402)
Q Consensus 59 ~dG~~l~~~~~-~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r-G~G~S~-~~~~~~ 135 (402)
.+|....|+.+ |.+. ....|.||++||..++..-..... .+-+.-.+.||-|+.+|-- ++=... ......
T Consensus 42 ~~g~~r~y~l~vP~g~----~~~apLvv~LHG~~~sgag~~~~s---g~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~ 114 (312)
T COG3509 42 VNGLKRSYRLYVPPGL----PSGAPLVVVLHGSGGSGAGQLHGT---GWDALADREGFLVAYPDGYDRAWNANGCGNWFG 114 (312)
T ss_pred cCCCccceEEEcCCCC----CCCCCEEEEEecCCCChHHhhccc---chhhhhcccCcEEECcCccccccCCCcccccCC
Confidence 34555566555 4432 234578999999999877542211 1222222579999999632 211000 000000
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHHhC-C--cceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQTG-Q--KPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~--~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
|... .-..+|.. ++.++++.+..+++ + +|++.|.|-||.++..+++.+| +.+.++..++...
T Consensus 115 p~~~---~~g~ddVg--flr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p--~~faa~A~VAg~~ 179 (312)
T COG3509 115 PADR---RRGVDDVG--FLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYP--DIFAAIAPVAGLL 179 (312)
T ss_pred cccc---cCCccHHH--HHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCc--ccccceeeeeccc
Confidence 1100 01233332 68889999999998 4 8999999999999999999988 8888888777643
No 159
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.25 E-value=1.3e-06 Score=77.89 Aligned_cols=103 Identities=24% Similarity=0.247 Sum_probs=74.9
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCc---EEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYD---VWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~---v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
.-+++++||+..+...| ..+...+...|+. ++.++.++.. ... +.... ..-+.+.
T Consensus 59 ~~pivlVhG~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~--------------~~~~~-~~ql~~~ 116 (336)
T COG1075 59 KEPIVLVHGLGGGYGNF------LPLDYRLAILGWLTNGVYAFELSGGD-GTY--------------SLAVR-GEQLFAY 116 (336)
T ss_pred CceEEEEccCcCCcchh------hhhhhhhcchHHHhcccccccccccC-CCc--------------ccccc-HHHHHHH
Confidence 45899999998888877 5566667777877 9999988751 111 00001 1134455
Q ss_pred HHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 158 LQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 158 v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
|+.+....+ +++.++||||||.++..++...+.+.+|+.++.++++-.
T Consensus 117 V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 117 VDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred HHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 666677777 899999999999999998888766679999998887643
No 160
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.20 E-value=4.7e-06 Score=65.93 Aligned_cols=124 Identities=20% Similarity=0.234 Sum_probs=72.3
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecC--CCC---cccCCCCCCC------CCCccccc--cc
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANT--RGT---KYSRGHVSLS------PDDSAFWD--WT 145 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~--rG~---G~S~~~~~~~------~~~~~~~~--~~ 145 (402)
+.-|++.++-|+.+....+..... +-+.-.+.|+.|+++|- ||. |.++...... ...++-|. |.
T Consensus 42 k~~P~lf~LSGLTCT~~Nfi~Ksg---~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yr 118 (283)
T KOG3101|consen 42 KRCPVLFYLSGLTCTHENFIEKSG---FQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYR 118 (283)
T ss_pred CcCceEEEecCCcccchhhHhhhh---HHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhh
Confidence 346789999999999887755321 22223367999999995 553 2222100000 00011111 22
Q ss_pred HHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccccc
Q 041488 146 WDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVG 207 (402)
Q Consensus 146 ~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~ 207 (402)
+=++...++.+.+..--..+. .++.+.||||||.=|+..+.++| .+.+++...+|..++.
T Consensus 119 MYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~--~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 119 MYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNP--SKYKSVSAFAPICNPI 179 (283)
T ss_pred HHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCc--ccccceeccccccCcc
Confidence 223322233333321111223 47899999999999999999988 8889988888876543
No 161
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.19 E-value=1.7e-06 Score=74.44 Aligned_cols=118 Identities=11% Similarity=-0.009 Sum_probs=69.0
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCC----CcEEeecCCCCcccCC--CCC---CCCCCcccccccHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNG----YDVWLANTRGTKYSRG--HVS---LSPDDSAFWDWTWDEL 149 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g----~~v~~~D~rG~G~S~~--~~~---~~~~~~~~~~~~~~~~ 149 (402)
..-|+|+++||.......+.. ......+.++| ..+++++..+.+.... ... .......-....+.++
T Consensus 22 ~~~PvlylldG~~~~~~~~~~----~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNGNA----QEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETF 97 (251)
T ss_dssp TTEEEEEEESHTTHHHHHHHH----HHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHH
T ss_pred CCCEEEEEccCCccccccchH----HHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCccccee
Confidence 456899999997322222211 22333333443 3466667655541110 000 0000001111133333
Q ss_pred hhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 150 VAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 150 ~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
.. .+++.+|.+.++ .+..++|+||||..++.++.++| +.+.++++++|...
T Consensus 98 l~---~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~P--d~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 98 LT---EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHP--DLFGAVIAFSGALD 151 (251)
T ss_dssp HH---THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHST--TTESEEEEESEESE
T ss_pred hh---ccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCc--cccccccccCcccc
Confidence 33 366777778887 23799999999999999999999 99999999998754
No 162
>COG0627 Predicted esterase [General function prediction only]
Probab=98.17 E-value=1.8e-05 Score=69.18 Aligned_cols=124 Identities=23% Similarity=0.293 Sum_probs=77.3
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC--CCcccCCCC--------CC-CCCCc--cccccc
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR--GTKYSRGHV--------SL-SPDDS--AFWDWT 145 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r--G~G~S~~~~--------~~-~~~~~--~~~~~~ 145 (402)
..-|+++++||..++...|+.. ..+-+...+.|..++++|-. +.+...... .. +..++ ....|.
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~---~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q 128 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLL---DGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQ 128 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEec---cchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccc
Confidence 3467888999999987666553 23444455678888887433 322211100 00 00000 011256
Q ss_pred HHHHhhcchHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhccccccccc
Q 041488 146 WDELVAYDLPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVG 207 (402)
Q Consensus 146 ~~~~~~~d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~ 207 (402)
++++...++.+.++..-.... ++..++||||||.-|+.+|.+|| ++++.+...+|.....
T Consensus 129 ~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~p--d~f~~~sS~Sg~~~~s 190 (316)
T COG0627 129 WETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHP--DRFKSASSFSGILSPS 190 (316)
T ss_pred hhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCc--chhceecccccccccc
Confidence 777766666655443222111 26899999999999999999998 9999999998877554
No 163
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.13 E-value=3.4e-06 Score=70.41 Aligned_cols=90 Identities=20% Similarity=0.119 Sum_probs=48.4
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHh--CCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLAD--NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~--~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
+...|||+||+.++...| ..+...+.. ..+.--.+...++...... + .-+++..+. .+..-
T Consensus 3 ~~hLvV~vHGL~G~~~d~------~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~---T-------~~gI~~~g~-rL~~e 65 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADM------RYLKNHLEKIPEDLPNARIVVLGYSNNEFK---T-------FDGIDVCGE-RLAEE 65 (217)
T ss_pred CCEEEEEeCCCCCCHHHH------HHHHHHHHHhhhhcchhhhhhhcccccccc---c-------chhhHHHHH-HHHHH
Confidence 356899999999999888 556565644 1221112222222111100 0 003444433 22222
Q ss_pred HHHHHHHhC---CcceEEecChhHHHHHHHhc
Q 041488 158 LQHVHDQTG---QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 158 v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~ 186 (402)
|....+... .++.+|||||||.++-.++.
T Consensus 66 I~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 66 ILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHhccccccccccceEEEecccHHHHHHHHH
Confidence 222222223 37999999999999877655
No 164
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.11 E-value=1.3e-05 Score=70.70 Aligned_cols=69 Identities=19% Similarity=0.296 Sum_probs=52.8
Q ss_pred CCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcc--hhccHHHHHHHhcC
Q 041488 328 MTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAG--QVLYEPLMAFFKLQ 402 (402)
Q Consensus 328 l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~--~~~~~~i~~fl~~~ 402 (402)
+.++. .+|+|+++|..|.+||...+..+++..+.. +.+...+++++|.. .....+ ++..+.+.+|+.++
T Consensus 227 ~~~i~-~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~---~~~~~~~~~~~H~~--~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 227 AEKIS-PRPVLLVHGERDEVVPLRDAEDLYEAARER---PKKLLFVPGGGHID--LYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred HhhcC-CcceEEEecCCCcccchhhhHHHHhhhccC---CceEEEecCCcccc--ccCccHHHHHHHHHHHHHHHHh
Confidence 44552 279999999999999999999998887762 36778889999984 222233 37889999999763
No 165
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.09 E-value=5.2e-05 Score=72.22 Aligned_cols=110 Identities=18% Similarity=0.003 Sum_probs=69.8
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhC-C-CcEEeecCC-C---CcccCCCCCCCCCCcccccccHHHHhhc
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADN-G-YDVWLANTR-G---TKYSRGHVSLSPDDSAFWDWTWDELVAY 152 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~-g-~~v~~~D~r-G---~G~S~~~~~~~~~~~~~~~~~~~~~~~~ 152 (402)
.+.|+||++||.+-....-. ......|++. + +.|+.+++| | ++.+.... .+ ..+...
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~-----~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~--~~----------~n~g~~ 155 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGS-----LYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDIE--LP----------GNYGLK 155 (493)
T ss_pred CCCCEEEEEcCCccccCCCC-----CCChHHHHhcCCCEEEEEecccccccccccCCCCC--CC----------cchhHH
Confidence 45799999999654322210 1122344443 3 899999999 3 32221100 00 012234
Q ss_pred chHHHHHHHHHHh---C---CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 153 DLPATLQHVHDQT---G---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 153 d~~~~v~~l~~~~---~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
|...+++++.+.. | .+|.++|+|.||..+..++........++++|+.++...
T Consensus 156 D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 156 DQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 7788888887753 4 589999999999999887776322367899998887553
No 166
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.08 E-value=5.6e-05 Score=71.50 Aligned_cols=128 Identities=16% Similarity=0.145 Sum_probs=72.0
Q ss_pred EEcCCCcEEEEEEecCCCCC--CCCCCCCcEEEecCccccccccccCCCCCCHHHHHH----------------hCCCcE
Q 041488 56 VTTKDGYILSMQRIPVGRSG--GEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLA----------------DNGYDV 117 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~--~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~----------------~~g~~v 117 (402)
-+..+.+.+..++-+.-.+. .....+-||||++|..++...- ++++.... ...|+-
T Consensus 62 t~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQv------RSiAS~a~n~y~~~~~e~t~~~d~~~~~DF 135 (973)
T KOG3724|consen 62 TPQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQV------RSIASVAQNAYQGGPFEKTEDRDNPFSFDF 135 (973)
T ss_pred cCCCCceEEEEecccccccccccccCCCceEEEecCCCCchHHH------HHHHHHHhhhhcCCchhhhhcccCccccce
Confidence 34556666666655432211 1223578999999988876543 44443332 123455
Q ss_pred EeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC----------CcceEEecChhHHHHHHHhcC
Q 041488 118 WLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG----------QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 118 ~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~----------~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
++.|.-+-- | .+..-+..+.++ -+..+|.+|++.+. ..++++||||||.+|...+..
T Consensus 136 FaVDFnEe~-t-----------Am~G~~l~dQtE-YV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 136 FAVDFNEEF-T-----------AMHGHILLDQTE-YVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred EEEcccchh-h-----------hhccHhHHHHHH-HHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 555554410 0 111124555544 36667777776553 138999999999999887765
Q ss_pred C-Ccccccchhhcccc
Q 041488 188 D-QPVNKLRSAALLSP 202 (402)
Q Consensus 188 ~-p~~~~v~~~v~~~p 202 (402)
. -.+..|.-++..+.
T Consensus 203 kn~~~~sVntIITlss 218 (973)
T KOG3724|consen 203 KNEVQGSVNTIITLSS 218 (973)
T ss_pred hhhccchhhhhhhhcC
Confidence 2 11245555555544
No 167
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.07 E-value=7.7e-05 Score=66.03 Aligned_cols=114 Identities=19% Similarity=0.097 Sum_probs=69.0
Q ss_pred CCCCcEEEecCccccccccccCCC-CCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPP-EQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~-~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
+..|+||++||.|---.....+.. -..+...| + .-.+++.|+.-.. |..+.. .+... ..++.+.
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~-~~~~~~-----------~yPtQ-L~qlv~~ 184 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTS-SDEHGH-----------KYPTQ-LRQLVAT 184 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccc-cccCCC-----------cCchH-HHHHHHH
Confidence 457999999998765443211100 01122222 2 4588888887533 000000 11111 2367778
Q ss_pred HHHHHHHhC-CcceEEecChhHHHHHHHhcC--CC-cccccchhhccccccccc
Q 041488 158 LQHVHDQTG-QKPHYVGHSLGTLIALASFSK--DQ-PVNKLRSAALLSPIAYVG 207 (402)
Q Consensus 158 v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~--~p-~~~~v~~~v~~~p~~~~~ 207 (402)
.+++.+..| ++|+|+|-|.||.+++.++.. ++ ....-+++|+++|.....
T Consensus 185 Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 185 YDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 888887778 899999999999999887643 11 112358999999987654
No 168
>COG3150 Predicted esterase [General function prediction only]
Probab=98.06 E-value=2.5e-05 Score=59.57 Aligned_cols=90 Identities=23% Similarity=0.295 Sum_probs=58.9
Q ss_pred EEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHH
Q 041488 84 VFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHD 163 (402)
Q Consensus 84 vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~ 163 (402)
||.+|||.+|..+. -+..+. .-+..|.|-.+.|..+....| .++.+.++.+..
T Consensus 2 ilYlHGFnSSP~sh--------ka~l~~----q~~~~~~~~i~y~~p~l~h~p---------------~~a~~ele~~i~ 54 (191)
T COG3150 2 ILYLHGFNSSPGSH--------KAVLLL----QFIDEDVRDIEYSTPHLPHDP---------------QQALKELEKAVQ 54 (191)
T ss_pred eEEEecCCCCcccH--------HHHHHH----HHHhccccceeeecCCCCCCH---------------HHHHHHHHHHHH
Confidence 89999999987764 111221 123445566666665544332 145556777777
Q ss_pred HhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 164 QTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 164 ~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
..+ +.+.++|-|+||+.+..++.++. +++ |+++|+..
T Consensus 55 ~~~~~~p~ivGssLGGY~At~l~~~~G----ira-v~~NPav~ 92 (191)
T COG3150 55 ELGDESPLIVGSSLGGYYATWLGFLCG----IRA-VVFNPAVR 92 (191)
T ss_pred HcCCCCceEEeecchHHHHHHHHHHhC----Chh-hhcCCCcC
Confidence 777 67999999999999999988753 444 44566543
No 169
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.03 E-value=5.5e-05 Score=68.40 Aligned_cols=135 Identities=22% Similarity=0.093 Sum_probs=82.1
Q ss_pred EcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCC-CcEEeecCC-C-CcccCCCCC
Q 041488 57 TTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNG-YDVWLANTR-G-TKYSRGHVS 133 (402)
Q Consensus 57 ~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g-~~v~~~D~r-G-~G~S~~~~~ 133 (402)
.++|...|-.|.-..+ ..+.|++|++||.+-....-.. + ..-...|+++| +-|+.+++| | +|.=+.+..
T Consensus 75 ~sEDCL~LNIwaP~~~-----a~~~PVmV~IHGG~y~~Gs~s~--~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~ 146 (491)
T COG2272 75 GSEDCLYLNIWAPEVP-----AEKLPVMVYIHGGGYIMGSGSE--P-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSL 146 (491)
T ss_pred ccccceeEEeeccCCC-----CCCCcEEEEEeccccccCCCcc--c-ccChHHHHhcCCEEEEEeCcccccceeeehhhc
Confidence 3556555555443312 1447999999995543221100 0 12234677888 999999998 2 244332111
Q ss_pred CCCCCcccccccHHHHhhcchHHHHHHHHHH---hC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 134 LSPDDSAFWDWTWDELVAYDLPATLQHVHDQ---TG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~---~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
...+ . ..+.....|+..+++++.+. +| ++|.|+|+|-||+.++.+++.......+.++|+.++...
T Consensus 147 ~~~~--~----~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 147 DTED--A----FASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccc--c----ccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 1000 0 11113345888888888875 45 589999999999999998877322247899999888654
No 170
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.03 E-value=9.2e-05 Score=60.38 Aligned_cols=78 Identities=21% Similarity=0.314 Sum_probs=51.3
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHH-hCCCc-EEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLA-DNGYD-VWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~-~~g~~-v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
+..|||..||+++...+ . +|. ..+|. ++++|+|-.-. |.
T Consensus 11 ~~LilfF~GWg~d~~~f------~----hL~~~~~~D~l~~yDYr~l~~-------------------------d~---- 51 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPF------S----HLILPENYDVLICYDYRDLDF-------------------------DF---- 51 (213)
T ss_pred CeEEEEEecCCCChHHh------h----hccCCCCccEEEEecCccccc-------------------------cc----
Confidence 56899999999987765 2 231 34554 56789887321 10
Q ss_pred HHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 159 QHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 159 ~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
+..+ +.+.||++|||-++|..+.... .++..|.+++...
T Consensus 52 ----~~~~y~~i~lvAWSmGVw~A~~~l~~~----~~~~aiAINGT~~ 91 (213)
T PF04301_consen 52 ----DLSGYREIYLVAWSMGVWAANRVLQGI----PFKRAIAINGTPY 91 (213)
T ss_pred ----ccccCceEEEEEEeHHHHHHHHHhccC----CcceeEEEECCCC
Confidence 0112 5899999999999998887653 3556666665444
No 171
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.03 E-value=9.9e-05 Score=68.69 Aligned_cols=137 Identities=17% Similarity=0.163 Sum_probs=80.0
Q ss_pred cCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCC---CCCCHH-----------HHHHhCCCcEEeecCC
Q 041488 58 TKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLP---PEQSLA-----------FLLADNGYDVWLANTR 123 (402)
Q Consensus 58 ~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~---~~~~~~-----------~~l~~~g~~v~~~D~r 123 (402)
...+.++.+|.+.... ....+|.||.+.|.++++..|.... | ..+. ..+ -+-.+|+.+|+|
T Consensus 20 ~~~~~~lfyw~~~s~~---~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP-~~~~~~~~~~l~~n~~sW-~~~an~l~iD~P 94 (415)
T PF00450_consen 20 DNENAHLFYWFFESRN---DPEDDPLILWLNGGPGCSSMWGLFGENGP-FRINPDGPYTLEDNPYSW-NKFANLLFIDQP 94 (415)
T ss_dssp TTTTEEEEEEEEE-SS---GGCSS-EEEEEE-TTTB-THHHHHCTTSS-EEEETTSTSEEEE-TT-G-GGTSEEEEE--S
T ss_pred CCCCcEEEEEEEEeCC---CCCCccEEEEecCCceeccccccccccCc-eEEeeccccccccccccc-ccccceEEEeec
Confidence 3467899999997654 3466899999999998887652211 1 0111 001 123679999955
Q ss_pred -CCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC----CcceEEecChhHHHHHHHhcC----CCc----
Q 041488 124 -GTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG----QKPHYVGHSLGTLIALASFSK----DQP---- 190 (402)
Q Consensus 124 -G~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~----~p~---- 190 (402)
|.|.|...... . ..++-++.+. |+..+++...++++ .++++.|.|+||.-+..+|.+ ...
T Consensus 95 vGtGfS~~~~~~-----~-~~~~~~~~a~-~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~ 167 (415)
T PF00450_consen 95 VGTGFSYGNDPS-----D-YVWNDDQAAE-DLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQP 167 (415)
T ss_dssp TTSTT-EESSGG-----G-GS-SHHHHHH-HHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--ST
T ss_pred CceEEeeccccc-----c-ccchhhHHHH-HHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccc
Confidence 99999753221 1 1224455544 66666666666555 489999999999987665543 210
Q ss_pred ccccchhhcccccccc
Q 041488 191 VNKLRSAALLSPIAYV 206 (402)
Q Consensus 191 ~~~v~~~v~~~p~~~~ 206 (402)
.-.++++++.+|...+
T Consensus 168 ~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 168 KINLKGIAIGNGWIDP 183 (415)
T ss_dssp TSEEEEEEEESE-SBH
T ss_pred ccccccceecCccccc
Confidence 1358899988887643
No 172
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.02 E-value=0.00011 Score=68.22 Aligned_cols=142 Identities=18% Similarity=0.128 Sum_probs=87.7
Q ss_pred CCcceEE-EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcc
Q 041488 49 DGICASV-VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKY 127 (402)
Q Consensus 49 ~~~~~~~-~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~ 127 (402)
.+.++.. +.+.||..+-+-.+.. +.....+++|.+|..||.-+-+- .+.+ ..--..|.+.|+.....|.||-|.
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~k-k~~k~dg~~P~LLygYGay~isl--~p~f--~~srl~lld~G~Vla~a~VRGGGe 512 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYK-KDIKLDGSKPLLLYGYGAYGISL--DPSF--RASRLSLLDRGWVLAYANVRGGGE 512 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEe-chhhhcCCCceEEEEecccceee--cccc--ccceeEEEecceEEEEEeeccCcc
Confidence 3444454 8899999888766642 21123356777766666443322 2211 111112346899999999999665
Q ss_pred cCCCCCCCCCCcc-cccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 128 SRGHVSLSPDDSA-FWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 128 S~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
-..... .++.. -.+-++ +|..+..+++.+.-= .+..+.|.|-||.++..+...+| +.+.++|+-.|.
T Consensus 513 ~G~~WH--k~G~lakKqN~f-----~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rP--dLF~avia~Vpf 583 (712)
T KOG2237|consen 513 YGEQWH--KDGRLAKKQNSF-----DDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRP--DLFGAVIAKVPF 583 (712)
T ss_pred cccchh--hccchhhhcccH-----HHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCc--hHhhhhhhcCcc
Confidence 322110 00000 001133 366688899887632 58999999999999999999998 999999977765
Q ss_pred c
Q 041488 204 A 204 (402)
Q Consensus 204 ~ 204 (402)
.
T Consensus 584 m 584 (712)
T KOG2237|consen 584 M 584 (712)
T ss_pred e
Confidence 4
No 173
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.00 E-value=0.00017 Score=63.43 Aligned_cols=120 Identities=19% Similarity=0.094 Sum_probs=80.9
Q ss_pred CcEEEecCccccccccccCCCCCCHHHHHH-hCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHH
Q 041488 82 LPVFLQHGLLMDAVTWLLLPPEQSLAFLLA-DNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQH 160 (402)
Q Consensus 82 ~~vll~HG~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~ 160 (402)
.||+|.-|.-++-..+.... -+...++ +.+--++..++|-+|+|-+-...+-++..-..|--.+.+..|.+.++.+
T Consensus 81 gPIffYtGNEGdie~Fa~nt---GFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNT---GFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhcc---chHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 78999999887766443221 2333343 3467799999999999975332211211111222233345599999999
Q ss_pred HHHHhC---CcceEEecChhHHHHHHHhcCCCcccccchhhcc-cccccc
Q 041488 161 VHDQTG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALL-SPIAYV 206 (402)
Q Consensus 161 l~~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~-~p~~~~ 206 (402)
+++.++ .+++++|-|+||+++..+=.++| +.+.+.... +|..++
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYP--Hiv~GAlAaSAPvl~f 205 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYP--HIVLGALAASAPVLYF 205 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcCh--hhhhhhhhccCceEee
Confidence 999877 58999999999999999988877 887776654 444433
No 174
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.96 E-value=0.00029 Score=60.06 Aligned_cols=63 Identities=17% Similarity=0.163 Sum_probs=52.8
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHH
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFF 399 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl 399 (402)
.+|-|+++++.|.+++.+..++..+.....+ ..++.+.+++..|... ...+|++.++.+.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G-~~V~~~~f~~S~HV~H--~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKG-WDVRAEKFEDSPHVAH--LRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcC-CeEEEecCCCCchhhh--cccCHHHHHHHHHhhC
Confidence 6899999999999999999998888776633 3578888999999863 3578999999999885
No 175
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.94 E-value=0.002 Score=59.03 Aligned_cols=64 Identities=14% Similarity=0.123 Sum_probs=48.8
Q ss_pred ccEEEEEeCCCccCChhHHHHHHHHccC----------CC----------CCceEEEECCCCCccceecccCcchhccHH
Q 041488 335 LPLFLSYGGADALSDVNDVKLLLESLND----------HE----------GDKLVVQYRQDYAHADYVMGENAGQVLYEP 394 (402)
Q Consensus 335 ~Pvlii~G~~D~~v~~~~~~~~~~~~~~----------~~----------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 394 (402)
.+++|..|+.|-+||....+.+.+.+.- .. -....+..+.++||+ .+.+.|+....-
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~---VP~~~p~~al~m 440 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHM---VPYDKPESALIM 440 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCccc---CCCCCcHHHHHH
Confidence 6999999999999999888887665532 00 011334667899998 588899999999
Q ss_pred HHHHHhc
Q 041488 395 LMAFFKL 401 (402)
Q Consensus 395 i~~fl~~ 401 (402)
+.+||..
T Consensus 441 ~~~fl~g 447 (454)
T KOG1282|consen 441 FQRFLNG 447 (454)
T ss_pred HHHHHcC
Confidence 9999864
No 176
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.92 E-value=2.8e-05 Score=72.59 Aligned_cols=114 Identities=18% Similarity=0.047 Sum_probs=71.4
Q ss_pred CCcEEEecCcccccc-ccccCCCCCCHHHHHHh-CCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 81 RLPVFLQHGLLMDAV-TWLLLPPEQSLAFLLAD-NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 81 ~~~vll~HG~~~~~~-~~~~~~~~~~~~~~l~~-~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
+|++|++ |.-+... .|.. ..+...|++ .|-.|++..+|-+|.|.+....+.+.-.| .|.++. ..|++.++
T Consensus 29 gpifl~~-ggE~~~~~~~~~----~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~y--Lt~~QA-LaD~a~F~ 100 (434)
T PF05577_consen 29 GPIFLYI-GGEGPIEPFWIN----NGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRY--LTSEQA-LADLAYFI 100 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-----HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC---SHHHH-HHHHHHHH
T ss_pred CCEEEEE-CCCCccchhhhc----CChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHh--cCHHHH-HHHHHHHH
Confidence 4555555 4444433 2322 234555654 47889999999999998654433332233 466666 44999999
Q ss_pred HHHHHHhC----CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 159 QHVHDQTG----QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 159 ~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
+++..+.. .|++++|-|+||+++..+-.++| +.|.+.+..+++.
T Consensus 101 ~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP--~~~~ga~ASSapv 148 (434)
T PF05577_consen 101 RYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP--HLFDGAWASSAPV 148 (434)
T ss_dssp HHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T--TT-SEEEEET--C
T ss_pred HHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC--CeeEEEEecccee
Confidence 99997763 48999999999999999999988 9999988877655
No 177
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.91 E-value=0.00062 Score=56.17 Aligned_cols=57 Identities=14% Similarity=0.081 Sum_probs=44.9
Q ss_pred EEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 337 LFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 337 vlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
+.++.+++|..+|-..+..+.+.+|+ .++..++ +||..- ..-..+.+.+.|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg-----~eVr~~e-gGHVsa--yl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPG-----CEVRYLE-GGHVSA--YLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCC-----CEEEEee-cCceee--eehhchHHHHHHHHHHHh
Confidence 78889999999999889999999999 7877777 899751 223556677777777654
No 178
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.84 E-value=0.00043 Score=64.79 Aligned_cols=136 Identities=15% Similarity=0.065 Sum_probs=83.5
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLS 135 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~ 135 (402)
++..||..+-.-.+-... ....++.|.+|...|.-+.+. .+.+ ......|.++|+.-...--||-|.=.+....+
T Consensus 424 a~a~dgv~VPVSLvyrkd-~~~~g~~p~lLygYGaYG~s~--~p~F--s~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~ 498 (682)
T COG1770 424 ATADDGVQVPVSLVYRKD-TKLDGSAPLLLYGYGAYGISM--DPSF--SIARLSLLDRGFVYAIAHVRGGGELGRAWYED 498 (682)
T ss_pred EEcCCCcEeeEEEEEecc-cCCCCCCcEEEEEeccccccC--CcCc--ccceeeeecCceEEEEEEeecccccChHHHHh
Confidence 555899877654442211 112355677777666444332 2222 22333566899888778889966543211100
Q ss_pred CCCcccccccHHHHhhcchHHHHHHHHHH-hC--CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 136 PDDSAFWDWTWDELVAYDLPATLQHVHDQ-TG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 136 ~~~~~~~~~~~~~~~~~d~~~~v~~l~~~-~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
-+-.. ..-||. |..++.++|.+. +. +.++++|-|.||+++...+...| +.++++|+--|..
T Consensus 499 GK~l~-K~NTf~-----DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P--~lf~~iiA~VPFV 562 (682)
T COG1770 499 GKLLN-KKNTFT-----DFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAP--DLFAGIIAQVPFV 562 (682)
T ss_pred hhhhh-ccccHH-----HHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhCh--hhhhheeecCCcc
Confidence 00000 011444 555778888765 33 58999999999999999999988 9999999877755
No 179
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.84 E-value=5.5e-05 Score=54.72 Aligned_cols=59 Identities=10% Similarity=0.186 Sum_probs=49.5
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHh
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 400 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~ 400 (402)
..|+|++.++.|+++|.+.++.+++.+++ .+++.+++.||..+ . ..-.-+.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-----s~lvt~~g~gHg~~--~-~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG-----SRLVTVDGAGHGVY--A-GGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC-----ceEEEEeccCccee--c-CCChHHHHHHHHHHH
Confidence 47999999999999999999999999998 89999999999942 1 333456777778875
No 180
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.74 E-value=0.00031 Score=62.54 Aligned_cols=58 Identities=16% Similarity=0.333 Sum_probs=50.6
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
++|.++|.|..|+...|.....+++.+++ ...+..+||++|.. .. ..+.+.+..|+..
T Consensus 262 ~~PK~ii~atgDeFf~pD~~~~y~d~L~G----~K~lr~vPN~~H~~--~~----~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 262 TMPKYIINATGDEFFVPDSSNFYYDKLPG----EKYLRYVPNAGHSL--IG----SDVVQSLRAFYNR 319 (367)
T ss_pred CccEEEEecCCCceeccCchHHHHhhCCC----CeeEEeCCCCCccc--ch----HHHHHHHHHHHHH
Confidence 78999999999999999999999999998 68899999999982 21 6778888888753
No 181
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.73 E-value=4e-05 Score=69.95 Aligned_cols=83 Identities=19% Similarity=0.157 Sum_probs=60.5
Q ss_pred CCHHHHHHhCCCcE-----Ee-ecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhCCcceEEecChh
Q 041488 104 QSLAFLLADNGYDV-----WL-ANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTGQKPHYVGHSLG 177 (402)
Q Consensus 104 ~~~~~~l~~~g~~v-----~~-~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~~~~~lvGhS~G 177 (402)
..+++.|.+.||.. .+ ||+|---. ..+++. ..+...|+.+.+..+++++|||||||
T Consensus 68 ~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-----------------~~~~~~-~~lk~~ie~~~~~~~~kv~li~HSmG 129 (389)
T PF02450_consen 68 AKLIENLEKLGYDRGKDLFAAPYDWRLSPA-----------------ERDEYF-TKLKQLIEEAYKKNGKKVVLIAHSMG 129 (389)
T ss_pred HHHHHHHHhcCcccCCEEEEEeechhhchh-----------------hHHHHH-HHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 67899998888863 33 78885221 112232 26777888877665689999999999
Q ss_pred HHHHHHHhcCCCcc----cccchhhcccccc
Q 041488 178 TLIALASFSKDQPV----NKLRSAALLSPIA 204 (402)
Q Consensus 178 g~~a~~~a~~~p~~----~~v~~~v~~~p~~ 204 (402)
|.++..++...+.. +.|+++|.++++.
T Consensus 130 gl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 130 GLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred chHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 99999998876432 4799999998764
No 182
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.67 E-value=0.0011 Score=58.34 Aligned_cols=69 Identities=19% Similarity=0.251 Sum_probs=55.8
Q ss_pred CCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHH
Q 041488 104 QSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIAL 182 (402)
Q Consensus 104 ~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~ 182 (402)
+.++.+|+++|+.|+-.|-.-|=-|.+ +-++.+. |+..++++-..+.+ .++.|+|.|+|+=+.-
T Consensus 277 k~v~~~l~~~gvpVvGvdsLRYfW~~r--------------tPe~~a~-Dl~r~i~~y~~~w~~~~~~liGySfGADvlP 341 (456)
T COG3946 277 KEVAEALQKQGVPVVGVDSLRYFWSER--------------TPEQIAA-DLSRLIRFYARRWGAKRVLLIGYSFGADVLP 341 (456)
T ss_pred HHHHHHHHHCCCceeeeehhhhhhccC--------------CHHHHHH-HHHHHHHHHHHhhCcceEEEEeecccchhhH
Confidence 568899999999999999766666665 4445544 89999999999888 8999999999998876
Q ss_pred HHhcC
Q 041488 183 ASFSK 187 (402)
Q Consensus 183 ~~a~~ 187 (402)
....+
T Consensus 342 ~~~n~ 346 (456)
T COG3946 342 FAYNR 346 (456)
T ss_pred HHHHh
Confidence 65544
No 183
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.62 E-value=0.0016 Score=57.73 Aligned_cols=108 Identities=16% Similarity=0.036 Sum_probs=80.8
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
..+|.|+..-|++.+..-. ...+...| +-+-+.+.+|-+|.|.+ +..++...++.+.+. |.-.++
T Consensus 61 ~drPtV~~T~GY~~~~~p~-----r~Ept~Ll---d~NQl~vEhRfF~~SrP------~p~DW~~Lti~QAA~-D~Hri~ 125 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPR-----RSEPTQLL---DGNQLSVEHRFFGPSRP------EPADWSYLTIWQAAS-DQHRIV 125 (448)
T ss_pred CCCCeEEEecCcccccCcc-----ccchhHhh---ccceEEEEEeeccCCCC------CCCCcccccHhHhhH-HHHHHH
Confidence 3478899999988765332 12344444 35778999999999984 333444456666654 999999
Q ss_pred HHHHHHhCCcceEEecChhHHHHHHHhcCCCcccccchhhc-cccc
Q 041488 159 QHVHDQTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAAL-LSPI 203 (402)
Q Consensus 159 ~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~-~~p~ 203 (402)
+.++..++++.+--|-|-||+.++.+=.-+| +.|++.|. ++|.
T Consensus 126 ~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP--~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 126 QAFKPIYPGKWISTGGSKGGMTAVYYRRFYP--DDVDGTVAYVAPN 169 (448)
T ss_pred HHHHhhccCCceecCcCCCceeEEEEeeeCC--CCCCeeeeeeccc
Confidence 9999988899999999999999988877777 99999886 4553
No 184
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.50 E-value=0.00034 Score=67.52 Aligned_cols=113 Identities=19% Similarity=0.030 Sum_probs=66.3
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC----CCcccCCCCCCCCCCcccccccHHHHhhcchH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR----GTKYSRGHVSLSPDDSAFWDWTWDELVAYDLP 155 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~ 155 (402)
..|++|++||.+-....=. .....-...+++++.-|+.+++| |+-.+..... . -..+...|..
T Consensus 124 ~lPV~v~ihGG~f~~G~~~--~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~------~-----~gN~Gl~Dq~ 190 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGS--FPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDA------P-----SGNYGLLDQR 190 (535)
T ss_dssp SEEEEEEE--STTTSSCTT--SGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTS------H-----BSTHHHHHHH
T ss_pred ccceEEEeecccccCCCcc--cccccccccccCCCEEEEEeccccccccccccccccc------C-----chhhhhhhhH
Confidence 4699999999655433210 00022334556789999999999 4432221100 0 0123345888
Q ss_pred HHHHHHHHH---hC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 156 ATLQHVHDQ---TG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 156 ~~v~~l~~~---~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
.+++++.+. +| ++|.|+|||-||..+...+........++++|+.++...
T Consensus 191 ~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 191 LALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred HHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 899999886 44 589999999999998876655222357999999888543
No 185
>PLN02606 palmitoyl-protein thioesterase
Probab=97.46 E-value=0.00024 Score=60.76 Aligned_cols=101 Identities=16% Similarity=0.147 Sum_probs=61.0
Q ss_pred CcEEEecCccccccccccCCCCCCHHHHHHh-CCCcEEeecCCCCcccCCCCCCCCCCcccccccH-HHHhhcchHHHHH
Q 041488 82 LPVFLQHGLLMDAVTWLLLPPEQSLAFLLAD-NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTW-DELVAYDLPATLQ 159 (402)
Q Consensus 82 ~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~v~ 159 (402)
.|||+.||.+++...-.. ..+.+.+.+ .|+.+.++- .|-+..+ ++ ..+ .+.+..+.+
T Consensus 27 ~PvViwHGlgD~~~~~~~----~~~~~~i~~~~~~pg~~v~-ig~~~~~---------------s~~~~~-~~Qv~~vce 85 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKV----SNLTQFLINHSGYPGTCVE-IGNGVQD---------------SLFMPL-RQQASIACE 85 (306)
T ss_pred CCEEEECCCCcccCCchH----HHHHHHHHhCCCCCeEEEE-ECCCccc---------------ccccCH-HHHHHHHHH
Confidence 489999999954432111 567776742 376655554 3322211 11 111 113334444
Q ss_pred HHHHH--hCCcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 160 HVHDQ--TGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 160 ~l~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
.+... +.+-++++|+|.||.++-.++.+.|....|+.+|.++..
T Consensus 86 ~l~~~~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 86 KIKQMKELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred HHhcchhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 44442 224699999999999999999997632368999988664
No 186
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.42 E-value=0.0021 Score=53.96 Aligned_cols=71 Identities=20% Similarity=0.248 Sum_probs=52.5
Q ss_pred CCCCCCCccEEEEEeCCCccCChh---HHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhcC
Q 041488 328 MTSIPHDLPLFLSYGGADALSDVN---DVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 328 l~~i~~~~Pvlii~G~~D~~v~~~---~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 402 (402)
...|. ++-.+-+-|+.|.+.-.- .+..++..++. ...+...=+++||.+.+-...-.+++...|.+|+.++
T Consensus 334 p~~I~-~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe---~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~ 407 (415)
T COG4553 334 PTAIT-NVALFTVEGENDDISGVGQTKAAHDLCSNIPE---DMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRY 407 (415)
T ss_pred hhhee-ceeEEEeecccccccccchhHHHHHHHhcChH---HHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHh
Confidence 44554 578899999999987654 44555556665 3345566789999997766667899999999999864
No 187
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=97.37 E-value=0.00023 Score=56.24 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=56.7
Q ss_pred CCCCCCCccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhcC
Q 041488 328 MTSIPHDLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKLQ 402 (402)
Q Consensus 328 l~~i~~~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 402 (402)
+..|+ ++++|-|-|+.|.|+.+-++....+...+........++.+++||.+++...--.+++++.|.+|+.++
T Consensus 129 p~aI~-~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 129 PAAIR-RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred hHHcc-cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 55664 689999999999999987665555544442224466678899999997766667899999999999875
No 188
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.27 E-value=0.00037 Score=62.72 Aligned_cols=84 Identities=19% Similarity=0.160 Sum_probs=58.8
Q ss_pred CCHHHHHHhCCCc------EEeecCCC-CcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecC
Q 041488 104 QSLAFLLADNGYD------VWLANTRG-TKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHS 175 (402)
Q Consensus 104 ~~~~~~l~~~g~~------v~~~D~rG-~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS 175 (402)
..+.+.|..-||. -..||+|= +-.|. -.+++ ...++..++..-+..| +|++|++||
T Consensus 127 ~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e---------------~rd~y-l~kLK~~iE~~~~~~G~kkVvlisHS 190 (473)
T KOG2369|consen 127 HELIENLVGIGYERGKTLFGAPYDWRLSYHNSE---------------ERDQY-LSKLKKKIETMYKLNGGKKVVLISHS 190 (473)
T ss_pred HHHHHHHHhhCcccCceeeccccchhhccCChh---------------HHHHH-HHHHHHHHHHHHHHcCCCceEEEecC
Confidence 4566667666776 45677774 32221 12233 2267888888888888 999999999
Q ss_pred hhHHHHHHHhcCCCcc------cccchhhccccc
Q 041488 176 LGTLIALASFSKDQPV------NKLRSAALLSPI 203 (402)
Q Consensus 176 ~Gg~~a~~~a~~~p~~------~~v~~~v~~~p~ 203 (402)
|||.+..+++..++.. +.|++++.+++.
T Consensus 191 MG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 191 MGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred CccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 9999999999988741 357777766553
No 189
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.23 E-value=0.00046 Score=64.28 Aligned_cols=90 Identities=19% Similarity=0.184 Sum_probs=57.4
Q ss_pred CCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHH
Q 041488 104 QSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIAL 182 (402)
Q Consensus 104 ~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~ 182 (402)
..+++.|++.||. --|+.|..+--+.....++ .-+++. ..+...|+.+.+..+ ++++|+||||||.+++
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le-------~rd~YF-~rLK~lIE~ay~~nggkKVVLV~HSMGglv~l 228 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAAYDWRLSFQNTE-------VRDQTL-SRLKSNIELMVATNGGKKVVVVPHSMGVLYFL 228 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecccccccCccchh-------hhhHHH-HHHHHHHHHHHHHcCCCeEEEEEeCCchHHHH
Confidence 4688889999997 3444443332221110010 112232 268888888877775 8999999999999999
Q ss_pred HHhcCCC-------------cccccchhhccccc
Q 041488 183 ASFSKDQ-------------PVNKLRSAALLSPI 203 (402)
Q Consensus 183 ~~a~~~p-------------~~~~v~~~v~~~p~ 203 (402)
.++..-+ ..+.|++.|.++++
T Consensus 229 yFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 229 HFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 9776311 11468889988875
No 190
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.22 E-value=0.0013 Score=58.68 Aligned_cols=50 Identities=16% Similarity=0.077 Sum_probs=40.6
Q ss_pred cchHHHHHHHHHHhC---C--cceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 152 YDLPATLQHVHDQTG---Q--KPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 152 ~d~~~~v~~l~~~~~---~--~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
-|...++.++.+.++ + |++++|+|.||+++..++.-.| ..+++++=-++.
T Consensus 164 iD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP--~~~~~~iDns~~ 218 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAP--WLFDGVIDNSSY 218 (403)
T ss_pred HHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCc--cceeEEEecCcc
Confidence 377777777777765 4 8999999999999999999877 899998854443
No 191
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.19 E-value=0.00081 Score=57.70 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=63.1
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHh-CCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLAD-NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQ 159 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~ 159 (402)
..|+|+.||.|++...-.. ..+.+.+.+ .|..|.++.. | .+... .|. .+..+ .+..+.+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~----~~~~~l~~~~~g~~~~~i~i-g--~~~~~--------s~~-~~~~~----Qve~vce 84 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATN----ANFTQLLTNLSGSPGFCLEI-G--NGVGD--------SWL-MPLTQ----QAEIACE 84 (314)
T ss_pred CCCeEEecCCCcccCCchH----HHHHHHHHhCCCCceEEEEE-C--CCccc--------cce-eCHHH----HHHHHHH
Confidence 4589999999998764211 456666644 3677777654 3 22210 110 01221 2333444
Q ss_pred HHHH--HhCCcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 160 HVHD--QTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 160 ~l~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
.+.. .+.+-++++|+|.||.++-.++.+.|....|+.+|.++..
T Consensus 85 ~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 85 KVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred HHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 4443 2224699999999999999999997622369999988764
No 192
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.16 E-value=0.00031 Score=59.60 Aligned_cols=104 Identities=14% Similarity=0.172 Sum_probs=49.9
Q ss_pred CCCcEEEecCcccccc---ccccCCCCCCHHHHHHh--CCCcEEeecCCCCcccCCCCCCCCCCcccccccH-HHHhhcc
Q 041488 80 NRLPVFLQHGLLMDAV---TWLLLPPEQSLAFLLAD--NGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTW-DELVAYD 153 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~---~~~~~~~~~~~~~~l~~--~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~-~~~~~~d 153 (402)
+..|||+.||++++.. .+ ..+...+.+ .|-.|.+++.-....++.. . ++ ..+ .+.
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m------~~i~~~i~~~~PG~yV~si~ig~~~~~D~~-----------~-s~f~~v-~~Q 64 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSM------GSIKELIEEQHPGTYVHSIEIGNDPSEDVE-----------N-SFFGNV-NDQ 64 (279)
T ss_dssp SS--EEEE--TT--S--TTTH------HHHHHHHHHHSTT--EEE--SSSSHHHHHH-----------H-HHHSHH-HHH
T ss_pred CCCcEEEEEcCccccCChhHH------HHHHHHHHHhCCCceEEEEEECCCcchhhh-----------h-hHHHHH-HHH
Confidence 4568999999998652 22 334444332 4777888877332111100 0 11 111 212
Q ss_pred hHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 154 LPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 154 ~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
+..+.+.+..... .-++++|+|.||.++-.++.+.+. ..|+.+|.++..
T Consensus 65 v~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~-~~V~nlISlggp 115 (279)
T PF02089_consen 65 VEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCND-PPVHNLISLGGP 115 (279)
T ss_dssp HHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TS-S-EEEEEEES--
T ss_pred HHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCC-CCceeEEEecCc
Confidence 3333343333222 569999999999999999988652 368999988664
No 193
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.08 E-value=0.025 Score=47.12 Aligned_cols=101 Identities=22% Similarity=0.141 Sum_probs=60.6
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQH 160 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~ 160 (402)
..+|=|+-|..-.+. ++..|+.+.+.|+++||.|++.=+.- |.- .+..-.-.......+++.
T Consensus 17 ~gvihFiGGaf~ga~---P~itYr~lLe~La~~Gy~ViAtPy~~-tfD--------------H~~~A~~~~~~f~~~~~~ 78 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAA---PQITYRYLLERLADRGYAVIATPYVV-TFD--------------HQAIAREVWERFERCLRA 78 (250)
T ss_pred CEEEEEcCcceeccC---cHHHHHHHHHHHHhCCcEEEEEecCC-CCc--------------HHHHHHHHHHHHHHHHHH
Confidence 556777777444332 12224778889999999999987743 211 111111112234445555
Q ss_pred HHHHhC-----CcceEEecChhHHHHHHHhcCCCcccccchhhccc
Q 041488 161 VHDQTG-----QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLS 201 (402)
Q Consensus 161 l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~ 201 (402)
+.+..+ -+++-+|||+|+-+-+.+.+..+ ..-++-|+++
T Consensus 79 L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~--~~r~gniliS 122 (250)
T PF07082_consen 79 LQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFD--VERAGNILIS 122 (250)
T ss_pred HHHhcCCCcccCCeeeeecccchHHHHHHhhhcc--CcccceEEEe
Confidence 555433 26788999999999888777643 3335666665
No 194
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.82 E-value=0.0009 Score=56.07 Aligned_cols=39 Identities=26% Similarity=0.407 Sum_probs=34.7
Q ss_pred CcceEEecChhHHHHHHHhcCCCcccccchhhccccccccc
Q 041488 167 QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVG 207 (402)
Q Consensus 167 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~ 207 (402)
++..++|||+||.+++.+...+| +.+...++++|...+.
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p--~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYP--DCFGRYGLISPSLWWH 175 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCc--chhceeeeecchhhhC
Confidence 57899999999999999999988 9999999999986543
No 195
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.73 E-value=0.0045 Score=51.54 Aligned_cols=98 Identities=21% Similarity=0.195 Sum_probs=63.8
Q ss_pred CcEEEecCccccccccccCCCCCCHHHHHHh-CCCcEEeecCCCCc--ccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 82 LPVFLQHGLLMDAVTWLLLPPEQSLAFLLAD-NGYDVWLANTRGTK--YSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 82 ~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~-~g~~v~~~D~rG~G--~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
.|+|++||.+++..+... .++.+.+.+ .|..|++.|.- -| .|.- ....+ .+..+.
T Consensus 24 ~P~ii~HGigd~c~~~~~----~~~~q~l~~~~g~~v~~leig-~g~~~s~l-------------~pl~~----Qv~~~c 81 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSM----ANLTQLLEELPGSPVYCLEIG-DGIKDSSL-------------MPLWE----QVDVAC 81 (296)
T ss_pred CCEEEEeccCcccccchH----HHHHHHHHhCCCCeeEEEEec-CCcchhhh-------------ccHHH----HHHHHH
Confidence 589999999998876212 566666655 48889999863 23 2210 01111 223344
Q ss_pred HHHHHH--hCCcceEEecChhHHHHHHHhcCCCcccccchhhcccc
Q 041488 159 QHVHDQ--TGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSP 202 (402)
Q Consensus 159 ~~l~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p 202 (402)
+++... +.+-.+++|.|.||.++-.++..-+. ..|+.+|.++.
T Consensus 82 e~v~~m~~lsqGynivg~SQGglv~Raliq~cd~-ppV~n~ISL~g 126 (296)
T KOG2541|consen 82 EKVKQMPELSQGYNIVGYSQGGLVARALIQFCDN-PPVKNFISLGG 126 (296)
T ss_pred HHHhcchhccCceEEEEEccccHHHHHHHHhCCC-CCcceeEeccC
Confidence 455432 23679999999999999988887553 56778777655
No 196
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.71 E-value=0.012 Score=53.68 Aligned_cols=120 Identities=13% Similarity=-0.048 Sum_probs=85.6
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
..+|+-|+|-|=+.....|..... ..+...-.+.|-.|+..++|=+|.|......+.. +....|..+. .+|++.+|
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~-~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~--nlk~LSs~QA-LaDla~fI 159 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNEN-LTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTS--NLKYLSSLQA-LADLAEFI 159 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCc-chHHHHHHHhCCeeEEeeeeccccCCCCCCCccc--chhhhhHHHH-HHHHHHHH
Confidence 346667777776666666754331 2333333356899999999999999765443332 3333355544 45999999
Q ss_pred HHHHHHhC--C--cceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 159 QHVHDQTG--Q--KPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 159 ~~l~~~~~--~--~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
+.+..+++ . +++..|-|+-|.++..+=..+| +.+.+.|..+++.
T Consensus 160 ~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yP--el~~GsvASSapv 207 (514)
T KOG2182|consen 160 KAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYP--ELTVGSVASSAPV 207 (514)
T ss_pred HHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCc--hhheeecccccce
Confidence 99998886 3 8999999999999998888877 9888888776654
No 197
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.70 E-value=0.0013 Score=51.72 Aligned_cols=51 Identities=24% Similarity=0.161 Sum_probs=33.6
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCc--ccccchhhccccc
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQP--VNKLRSAALLSPI 203 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~--~~~v~~~v~~~p~ 203 (402)
.+...++....+++ .+++++|||+||.+|..++.+... ...+..++..+++
T Consensus 13 ~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 13 LVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 44445555555556 899999999999999998776421 0244555555544
No 198
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.67 E-value=0.041 Score=43.87 Aligned_cols=118 Identities=16% Similarity=0.117 Sum_probs=68.3
Q ss_pred CCCCcEEEecCccccccccccCCCC--CCHHHHHH------hCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHh
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPE--QSLAFLLA------DNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELV 150 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~--~~~~~~l~------~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 150 (402)
....+.++++|.+.+.......... ..+...+. ..+=.|-++-|.||=....... ..-+ . .+-+-.
T Consensus 17 ~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~-~a~~----~-~~A~~g 90 (177)
T PF06259_consen 17 TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLP-DAAS----P-GYARAG 90 (177)
T ss_pred CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccc-cccC----c-hHHHHH
Confidence 4577999999998887654221000 01111111 1233555555555432210000 0000 0 122222
Q ss_pred hcchHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 151 AYDLPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 151 ~~d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
..+|..+++-|....+ ..+.++|||+|+.++-.++...+ ..++.+|+++.+.
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~--~~vddvv~~GSPG 144 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGG--LRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCC--CCcccEEEECCCC
Confidence 3377788888877763 68999999999999999988754 7889999887654
No 199
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.39 E-value=0.054 Score=50.23 Aligned_cols=64 Identities=11% Similarity=0.060 Sum_probs=50.1
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCC----------C---------C-ceEEEECCCCCccceecccCcchhccH
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHE----------G---------D-KLVVQYRQDYAHADYVMGENAGQVLYE 393 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~----------~---------~-~~~~~~~~~~gH~~~~~~~~~~~~~~~ 393 (402)
.++|||..|..|-+||.-..+.+.+.+.-.. . . ..+++.+-++||+ .. .+|+...+
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHm---Vp-~qP~~al~ 422 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHT---AE-YRPNETFI 422 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCC---CC-CCHHHHHH
Confidence 4699999999999999998888888775210 0 1 1556677899999 24 58999999
Q ss_pred HHHHHHhc
Q 041488 394 PLMAFFKL 401 (402)
Q Consensus 394 ~i~~fl~~ 401 (402)
.+..|+..
T Consensus 423 m~~~Fi~~ 430 (433)
T PLN03016 423 MFQRWISG 430 (433)
T ss_pred HHHHHHcC
Confidence 99999864
No 200
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.38 E-value=0.0045 Score=47.70 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=26.7
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcC
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
.+...++.+.++.+ .++++.|||+||.+|..++..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 44455555666666 689999999999999887765
No 201
>PLN02209 serine carboxypeptidase
Probab=96.35 E-value=0.079 Score=49.17 Aligned_cols=136 Identities=15% Similarity=0.042 Sum_probs=78.1
Q ss_pred CCCcEEEEEEecCCCCCCCCCCCCcEEEecCcccccccccc---CCCCCCHH-------HHHH------hCCCcEEeecC
Q 041488 59 KDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLL---LPPEQSLA-------FLLA------DNGYDVWLANT 122 (402)
Q Consensus 59 ~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~---~~~~~~~~-------~~l~------~~g~~v~~~D~ 122 (402)
..|..+.+|.+.... .....|.||.+-|.++++..+.. ..|.+--. ..|. .+-.+++.+|.
T Consensus 49 ~~~~~lf~~f~es~~---~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDq 125 (437)
T PLN02209 49 EENVQFFYYFIKSDK---NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQ 125 (437)
T ss_pred CCCeEEEEEEEecCC---CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecC
Confidence 447788888886543 33558999999999887765421 11111000 0111 12357999995
Q ss_pred -CCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC----CcceEEecChhHHHHHHHhcC----C---Cc
Q 041488 123 -RGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG----QKPHYVGHSLGTLIALASFSK----D---QP 190 (402)
Q Consensus 123 -rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~----~---p~ 190 (402)
.|.|.|....... +. +-++.+ +|+-.+++...+..+ .++++.|.|+||.-+-.+|.. . +.
T Consensus 126 PvGtGfSy~~~~~~-----~~--~~~~~a-~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~ 197 (437)
T PLN02209 126 PVGSGFSYSKTPIE-----RT--SDTSEV-KKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCN 197 (437)
T ss_pred CCCCCccCCCCCCC-----cc--CCHHHH-HHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccC
Confidence 5999986422100 00 111222 355556655555554 489999999999765554432 1 00
Q ss_pred -ccccchhhccccccc
Q 041488 191 -VNKLRSAALLSPIAY 205 (402)
Q Consensus 191 -~~~v~~~v~~~p~~~ 205 (402)
.-.++++++.++...
T Consensus 198 ~~inl~Gi~igng~td 213 (437)
T PLN02209 198 PPINLQGYVLGNPITH 213 (437)
T ss_pred CceeeeeEEecCcccC
Confidence 125678888877553
No 202
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.34 E-value=0.0073 Score=48.34 Aligned_cols=114 Identities=16% Similarity=0.128 Sum_probs=65.5
Q ss_pred CCCCcEEEecCcccccc-ccccC---------CCCCCHHHHHHhCCCcEEeecCCC---CcccCCCCCCCCCCccccccc
Q 041488 79 GNRLPVFLQHGLLMDAV-TWLLL---------PPEQSLAFLLADNGYDVWLANTRG---TKYSRGHVSLSPDDSAFWDWT 145 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~-~~~~~---------~~~~~~~~~l~~~g~~v~~~D~rG---~G~S~~~~~~~~~~~~~~~~~ 145 (402)
.+++.+||+||.|.-.. .|... ..+-...+.-.+.||.|++.+.-- +-.+... | ..|.. +
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~n----p--~kyir-t 171 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRN----P--QKYIR-T 171 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccC----c--chhcc-c
Confidence 44668999999876432 33210 011123444447899999987541 1111110 1 11211 1
Q ss_pred HHHHhhcchHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 146 WDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 146 ~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
-.+.+. -+...+..... ..++++.||.||...+.++.+.|.-++|.++.+-+.+
T Consensus 172 ~veh~~----yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 172 PVEHAK----YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred hHHHHH----HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 111211 12223333333 6899999999999999999998866788888776654
No 203
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.34 E-value=0.0033 Score=52.45 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhCCcceEEecChhHHHHHHHhcCCC--cccccchhhccccccc
Q 041488 155 PATLQHVHDQTGQKPHYVGHSLGTLIALASFSKDQ--PVNKLRSAALLSPIAY 205 (402)
Q Consensus 155 ~~~v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~~~v~~~v~~~p~~~ 205 (402)
.+.++.+.+.+++++++.|||.||.+|..++..-+ ..++|.++...++++.
T Consensus 72 ~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 72 LAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 34456666666667999999999999999887632 1257888887766554
No 204
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.27 E-value=0.0051 Score=49.99 Aligned_cols=100 Identities=15% Similarity=0.100 Sum_probs=60.9
Q ss_pred cEEEecCccccccc-cccCCCCCCH---HH--------HHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHh
Q 041488 83 PVFLQHGLLMDAVT-WLLLPPEQSL---AF--------LLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELV 150 (402)
Q Consensus 83 ~vll~HG~~~~~~~-~~~~~~~~~~---~~--------~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~ 150 (402)
-|++||+....... |......... +. .+ ..-.+|++|=+|=............+ .-..-+++
T Consensus 3 DvFyV~PT~~~~~~~~n~~i~~~~~~~~~~~~~~~qas~F-~~~~~vfAP~YRQatl~~~~~~~~~~-----~~~a~~~a 76 (207)
T PF11288_consen 3 DVFYVYPTVYSGGSHWNADIDDPEMRALARGVVRNQASAF-NGVCNVFAPRYRQATLYAFLDTDRED-----AEKAFDLA 76 (207)
T ss_pred eEEEECCeeccCCCCCCCCCCCHHHHHHHHHHHHHHhhhh-hcCCccccChhhcchhhhhhccCcch-----hHHHHHhh
Confidence 37788876665554 6544322222 11 12 22367899888853322211000011 11333455
Q ss_pred hcchHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcCC
Q 041488 151 AYDLPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 151 ~~d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
..|+.++.++-+++.+ .+++|+|||.|+.++..++.+.
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 5689999998888887 6899999999999999998763
No 205
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.67 E-value=0.06 Score=49.50 Aligned_cols=124 Identities=19% Similarity=0.107 Sum_probs=74.2
Q ss_pred CCCCcEEEecCccccccccccCC---C---------CC--CHHHHHHhCCCcEEeec-CCCCcccCCCCCCCCCCccccc
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLP---P---------EQ--SLAFLLADNGYDVWLAN-TRGTKYSRGHVSLSPDDSAFWD 143 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~---~---------~~--~~~~~l~~~g~~v~~~D-~rG~G~S~~~~~~~~~~~~~~~ 143 (402)
.++|.|+.+.|.++++..|...+ | -. +....+ ..-.++.+| .-|.|.|........
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~--~~adLvFiDqPvGTGfS~a~~~e~~------- 169 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWL--DFADLVFIDQPVGTGFSRALGDEKK------- 169 (498)
T ss_pred CCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccc--cCCceEEEecCcccCcccccccccc-------
Confidence 56899999999999887663321 1 00 111111 113689999 559999984111111
Q ss_pred ccHHHHhhcchHHHHHHHHHHhC------CcceEEecChhHHHHHHHhcCCC-cccccchhhcccccccccC-Cchh
Q 041488 144 WTWDELVAYDLPATLQHVHDQTG------QKPHYVGHSLGTLIALASFSKDQ-PVNKLRSAALLSPIAYVGQ-MTSP 212 (402)
Q Consensus 144 ~~~~~~~~~d~~~~v~~l~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p-~~~~v~~~v~~~p~~~~~~-~~~~ 212 (402)
-++... ..|+..+.+.+.+.+. .+.+|+|-|+||.-+..+|..=- .....++++.++++..... ..+|
T Consensus 170 ~d~~~~-~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng~~t~P 245 (498)
T COG2939 170 KDFEGA-GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNGLWTDP 245 (498)
T ss_pred cchhcc-chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCCcccCh
Confidence 133333 3377777777766543 38999999999998877765411 0024677777777654433 4444
No 206
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.62 E-value=0.014 Score=49.85 Aligned_cols=48 Identities=19% Similarity=0.174 Sum_probs=38.5
Q ss_pred HHHHHHHHhC-----CcceEEecChhHHHHHHHhcCCCcccccchhhcccccccc
Q 041488 157 TLQHVHDQTG-----QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYV 206 (402)
Q Consensus 157 ~v~~l~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~ 206 (402)
++=++.+.+. +.-+|+|-|+||.+++..+..+| +.+-.++..+|....
T Consensus 162 LlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~P--e~FG~V~s~Sps~~~ 214 (299)
T COG2382 162 LLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHP--ERFGHVLSQSGSFWW 214 (299)
T ss_pred hhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCc--hhhceeeccCCcccc
Confidence 4445555554 35689999999999999999998 999999988887643
No 207
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.54 E-value=0.015 Score=49.24 Aligned_cols=51 Identities=20% Similarity=0.092 Sum_probs=33.5
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCc---ccccchhhccccc
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQP---VNKLRSAALLSPI 203 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~---~~~v~~~v~~~p~ 203 (402)
++...+..++++.+ .++++.|||+||.+|..++..-.. ...+..+++-+|.
T Consensus 113 ~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 113 QVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 44455555555556 789999999999999887764110 1346655555554
No 208
>PLN02454 triacylglycerol lipase
Probab=95.51 E-value=0.017 Score=52.22 Aligned_cols=36 Identities=22% Similarity=0.273 Sum_probs=28.4
Q ss_pred cchHHHHHHHHHHhC-C--cceEEecChhHHHHHHHhcC
Q 041488 152 YDLPATLQHVHDQTG-Q--KPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 152 ~d~~~~v~~l~~~~~-~--~~~lvGhS~Gg~~a~~~a~~ 187 (402)
+++...|+.+.+.++ . +|++.|||+||.+|..+|..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 356667777777776 4 49999999999999998753
No 209
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.32 E-value=0.034 Score=53.84 Aligned_cols=114 Identities=20% Similarity=0.111 Sum_probs=67.7
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC----CCcccCCCCCCCCCCcccccccHHHHhhcchHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR----GTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPA 156 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r----G~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 156 (402)
-|++|++||.+-....-... ........+.....-|+.+.+| |+.... .... +. .+...|...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~-~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~-d~~~-~g----------N~gl~Dq~~ 178 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSF-EIISPAYVLLLKDVVVVTINYRLGPLGFLSTG-DSAA-PG----------NLGLFDQLL 178 (545)
T ss_pred CCEEEEEeCCceeeccccch-hhcCchhccccCCEEEEEecccceeceeeecC-CCCC-CC----------cccHHHHHH
Confidence 68999999976533321000 0022233343456778888888 332221 1110 11 122337777
Q ss_pred HHHHHHHHh---C---CcceEEecChhHHHHHHHhcCCCcccccchhhccccccccc
Q 041488 157 TLQHVHDQT---G---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAYVG 207 (402)
Q Consensus 157 ~v~~l~~~~---~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~~~ 207 (402)
+++++.+.. | ++|.++|||.||..+...+........+.++|.++......
T Consensus 179 AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~~ 235 (545)
T KOG1516|consen 179 ALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALSP 235 (545)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccccc
Confidence 888887753 3 58999999999999987766532335788888887765433
No 210
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.29 E-value=0.14 Score=44.88 Aligned_cols=42 Identities=14% Similarity=0.275 Sum_probs=39.2
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCcc
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHA 379 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 379 (402)
.+|-+|+.|+.|...+|+++..+++.+|+ ..-+..+|+..|.
T Consensus 329 alpKyivnaSgDdff~pDsa~lYyd~LPG----~kaLrmvPN~~H~ 370 (507)
T COG4287 329 ALPKYIVNASGDDFFVPDSANLYYDDLPG----EKALRMVPNDPHN 370 (507)
T ss_pred cccceeecccCCcccCCCccceeeccCCC----ceeeeeCCCCcch
Confidence 68999999999999999999999999999 5778899999998
No 211
>PLN00413 triacylglycerol lipase
Probab=95.14 E-value=0.026 Score=51.70 Aligned_cols=34 Identities=29% Similarity=0.366 Sum_probs=27.3
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhc
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~ 186 (402)
.+...++.+++..+ .++++.|||+||++|..++.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45556666777777 78999999999999998774
No 212
>PLN02162 triacylglycerol lipase
Probab=94.81 E-value=0.035 Score=50.75 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=25.3
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhc
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~ 186 (402)
.+...++.++.+.+ .++++.|||+||++|..++.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34445555555556 68999999999999988654
No 213
>PLN02571 triacylglycerol lipase
Probab=94.64 E-value=0.038 Score=50.00 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=25.9
Q ss_pred chHHHHHHHHHHhC-C--cceEEecChhHHHHHHHhcC
Q 041488 153 DLPATLQHVHDQTG-Q--KPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~--~~~lvGhS~Gg~~a~~~a~~ 187 (402)
++...|+.+.+.+. . ++++.|||+||.+|..+|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44455666666665 3 68999999999999887753
No 214
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.53 E-value=1 Score=40.19 Aligned_cols=64 Identities=8% Similarity=0.097 Sum_probs=49.7
Q ss_pred ccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 335 LPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 335 ~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
.+.+.+++..|.++|.+..+++.+....... .++.+-+.++-|.. .....|....+...+|++.
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~-~v~s~~~~ds~H~~--h~r~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGV-NVKSVKFKDSEHVA--HFRSFPKTYLKKCSEFLRS 289 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCc-eEEEeeccCcccee--eeccCcHHHHHHHHHHHHh
Confidence 6788999999999999999888666655322 45566677788874 3457899999999999975
No 215
>PLN02408 phospholipase A1
Probab=94.49 E-value=0.044 Score=48.84 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=26.5
Q ss_pred chHHHHHHHHHHhC-C--cceEEecChhHHHHHHHhcC
Q 041488 153 DLPATLQHVHDQTG-Q--KPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~--~~~lvGhS~Gg~~a~~~a~~ 187 (402)
.+...|+.+.+.++ . +|++.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 44455666666666 3 59999999999999887764
No 216
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=94.40 E-value=0.048 Score=39.79 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=23.4
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCcccccccc
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTW 97 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~ 97 (402)
.+..+|..|+..+..... ....||||+||+++|-..|
T Consensus 72 ~t~I~g~~iHFih~rs~~-----~~aiPLll~HGWPgSf~Ef 108 (112)
T PF06441_consen 72 KTEIDGLDIHFIHVRSKR-----PNAIPLLLLHGWPGSFLEF 108 (112)
T ss_dssp EEEETTEEEEEEEE--S------TT-EEEEEE--SS--GGGG
T ss_pred eEEEeeEEEEEEEeeCCC-----CCCeEEEEECCCCccHHhH
Confidence 455689999998887654 5678999999999987665
No 217
>PLN02934 triacylglycerol lipase
Probab=94.38 E-value=0.046 Score=50.51 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=27.4
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhc
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~ 186 (402)
.+...++.++++++ .++++.|||+||++|..++.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 35566677777777 79999999999999988864
No 218
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.28 E-value=0.083 Score=49.69 Aligned_cols=67 Identities=16% Similarity=0.021 Sum_probs=51.4
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCC-------CceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEG-------DKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
.-.+++.||..|.++|+..+..+++++....+ .-.++..+|+.+|+.-- ....+-+.+..|.+|+|+
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG-~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGG-PGPDPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCC-CCCCCCCHHHHHHHHHhC
Confidence 35799999999999999999888887654221 35789999999998421 113455788999999985
No 219
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.17 E-value=0.027 Score=45.35 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=38.3
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcC--C--Ccccccchhhcccccc
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSK--D--QPVNKLRSAALLSPIA 204 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~--~--p~~~~v~~~v~~~p~~ 204 (402)
++...++....+.+ .+++|+|+|+|+.++..++.. . ...++|.++++++-..
T Consensus 66 ~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 66 NLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred HHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 66666777667777 799999999999999998766 1 1125788888776543
No 220
>PLN02310 triacylglycerol lipase
Probab=94.10 E-value=0.053 Score=49.00 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHh---C--CcceEEecChhHHHHHHHhcC
Q 041488 154 LPATLQHVHDQT---G--QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 154 ~~~~v~~l~~~~---~--~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
+...|..+.+.+ + .+|++.|||+||++|..++..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 334445555444 2 379999999999999887743
No 221
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.92 E-value=0.056 Score=50.10 Aligned_cols=21 Identities=33% Similarity=0.387 Sum_probs=18.0
Q ss_pred CcceEEecChhHHHHHHHhcC
Q 041488 167 QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 167 ~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
.++++.|||+||.+|...|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 369999999999999887743
No 222
>PLN02324 triacylglycerol lipase
Probab=93.65 E-value=0.08 Score=47.93 Aligned_cols=34 Identities=21% Similarity=0.432 Sum_probs=25.9
Q ss_pred chHHHHHHHHHHhC-C--cceEEecChhHHHHHHHhc
Q 041488 153 DLPATLQHVHDQTG-Q--KPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~--~~~lvGhS~Gg~~a~~~a~ 186 (402)
.+...|..+.+.++ . +|++.|||+||++|..+|.
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 34455666666666 2 6999999999999988775
No 223
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.24 E-value=3.5 Score=38.22 Aligned_cols=120 Identities=16% Similarity=0.028 Sum_probs=71.3
Q ss_pred EEcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCc-EEeecCCCCcccCCCCCC
Q 041488 56 VTTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYD-VWLANTRGTKYSRGHVSL 134 (402)
Q Consensus 56 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~-v~~~D~rG~G~S~~~~~~ 134 (402)
+.++.+..+.++.-|.. -+.|..|..-|+-. ..-+.. ..+.+ ..|.- .+.-|.|=-|.+=-
T Consensus 270 ~~D~~reEi~yYFnPGD------~KPPL~VYFSGyR~-aEGFEg----y~MMk---~Lg~PfLL~~DpRleGGaFY---- 331 (511)
T TIGR03712 270 LVDSKRQEFIYYFNPGD------FKPPLNVYFSGYRP-AEGFEG----YFMMK---RLGAPFLLIGDPRLEGGAFY---- 331 (511)
T ss_pred EecCCCCeeEEecCCcC------CCCCeEEeeccCcc-cCcchh----HHHHH---hcCCCeEEeeccccccceee----
Confidence 34444555555444433 33556777777655 322211 22333 33433 55668887665421
Q ss_pred CCCCcccccccHHHHhhcchHHHHHHHHHHhC---CcceEEecChhHHHHHHHhcC-CCcccccchhhcccccccccC
Q 041488 135 SPDDSAFWDWTWDELVAYDLPATLQHVHDQTG---QKPHYVGHSLGTLIALASFSK-DQPVNKLRSAALLSPIAYVGQ 208 (402)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~---~~~~lvGhS~Gg~~a~~~a~~-~p~~~~v~~~v~~~p~~~~~~ 208 (402)
..-+++ ...+..+|+.-++.+| .+++|-|-|||..-|+.|++. .| .++|+--|..+.+.
T Consensus 332 ---------lGs~ey-E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P-----~AIiVgKPL~NLGt 394 (511)
T TIGR03712 332 ---------LGSDEY-EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSP-----HAIIVGKPLVNLGT 394 (511)
T ss_pred ---------eCcHHH-HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCC-----ceEEEcCcccchhh
Confidence 011233 2356777888888888 589999999999999999887 44 56776666665443
No 224
>PLN02719 triacylglycerol lipase
Probab=93.17 E-value=0.11 Score=48.27 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=25.2
Q ss_pred chHHHHHHHHHHhC------CcceEEecChhHHHHHHHhc
Q 041488 153 DLPATLQHVHDQTG------QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 153 d~~~~v~~l~~~~~------~~~~lvGhS~Gg~~a~~~a~ 186 (402)
++...|..+.+.++ .+|++.|||+||.+|..+|.
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 34455566666553 27999999999999998774
No 225
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.09 E-value=0.54 Score=36.15 Aligned_cols=78 Identities=14% Similarity=0.180 Sum_probs=49.9
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCc-EEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYD-VWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQ 159 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~-v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~ 159 (402)
...||..-||+..+... .++ ...+++. +++||++.... ++++..+
T Consensus 11 d~LIvyFaGwgtpps~v------~HL---ilpeN~dl~lcYDY~dl~l---------------dfDfsAy---------- 56 (214)
T COG2830 11 DHLIVYFAGWGTPPSAV------NHL---ILPENHDLLLCYDYQDLNL---------------DFDFSAY---------- 56 (214)
T ss_pred CEEEEEEecCCCCHHHH------hhc---cCCCCCcEEEEeehhhcCc---------------ccchhhh----------
Confidence 34788889998877654 222 2245554 68899987542 1122211
Q ss_pred HHHHHhCCcceEEecChhHHHHHHHhcCCCcccccchhhccccc
Q 041488 160 HVHDQTGQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPI 203 (402)
Q Consensus 160 ~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~ 203 (402)
+.+.||.+|||-++|-+.+.. -+++..+.+.+.
T Consensus 57 -------~hirlvAwSMGVwvAeR~lqg----~~lksatAiNGT 89 (214)
T COG2830 57 -------RHIRLVAWSMGVWVAERVLQG----IRLKSATAINGT 89 (214)
T ss_pred -------hhhhhhhhhHHHHHHHHHHhh----ccccceeeecCC
Confidence 256789999999999998865 345555555543
No 226
>PLN02802 triacylglycerol lipase
Probab=93.08 E-value=0.11 Score=48.22 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=25.8
Q ss_pred chHHHHHHHHHHhC-C--cceEEecChhHHHHHHHhcC
Q 041488 153 DLPATLQHVHDQTG-Q--KPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~--~~~lvGhS~Gg~~a~~~a~~ 187 (402)
++...|..+.+.+. + +|++.|||+||.+|..++..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 34455566666665 2 68999999999999887754
No 227
>PLN02753 triacylglycerol lipase
Probab=92.91 E-value=0.12 Score=48.04 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=25.3
Q ss_pred chHHHHHHHHHHhC------CcceEEecChhHHHHHHHhc
Q 041488 153 DLPATLQHVHDQTG------QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 153 d~~~~v~~l~~~~~------~~~~lvGhS~Gg~~a~~~a~ 186 (402)
++...|+.+.+.++ -+|++.|||+||.+|..+|.
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34455566666553 38999999999999998874
No 228
>PLN02761 lipase class 3 family protein
Probab=92.80 E-value=0.13 Score=47.91 Aligned_cols=34 Identities=29% Similarity=0.369 Sum_probs=25.2
Q ss_pred chHHHHHHHHHHh-----C--CcceEEecChhHHHHHHHhc
Q 041488 153 DLPATLQHVHDQT-----G--QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 153 d~~~~v~~l~~~~-----~--~~~~lvGhS~Gg~~a~~~a~ 186 (402)
++...|..+.+.+ + -+|++.|||+||.+|..+|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3445566666665 2 37999999999999998774
No 229
>PLN02847 triacylglycerol lipase
Probab=91.76 E-value=0.23 Score=47.00 Aligned_cols=33 Identities=30% Similarity=0.167 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHhC-CcceEEecChhHHHHHHHhc
Q 041488 154 LPATLQHVHDQTG-QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 154 ~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~ 186 (402)
+...+..+.+.++ -+++++|||+||.+|..++.
T Consensus 237 i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAi 270 (633)
T PLN02847 237 STPCLLKALDEYPDFKIKIVGHSLGGGTAALLTY 270 (633)
T ss_pred HHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHH
Confidence 3334444555555 58999999999999987654
No 230
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=90.69 E-value=0.28 Score=41.47 Aligned_cols=36 Identities=25% Similarity=0.097 Sum_probs=29.1
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
+..++...+++.++ .++.|-|||+||++|..+..++
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 34455667777788 8999999999999998887774
No 231
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=90.69 E-value=0.28 Score=41.47 Aligned_cols=36 Identities=25% Similarity=0.097 Sum_probs=29.1
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
+..++...+++.++ .++.|-|||+||++|..+..++
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 34455667777788 8999999999999998887774
No 232
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.77 E-value=0.39 Score=43.06 Aligned_cols=35 Identities=26% Similarity=0.241 Sum_probs=29.1
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcC
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
.+.+.++.+...++ -++.+-|||+||.+|..+|..
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 56667778888887 699999999999999887764
No 233
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=88.96 E-value=1 Score=40.10 Aligned_cols=64 Identities=11% Similarity=0.060 Sum_probs=49.9
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCC----------C---------C-ceEEEECCCCCccceecccCcchhccH
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHE----------G---------D-KLVVQYRQDYAHADYVMGENAGQVLYE 393 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~----------~---------~-~~~~~~~~~~gH~~~~~~~~~~~~~~~ 393 (402)
.++|||..|..|.+|+.-..+.+.+.+.-.. . . ...++.+.++||+ .. .+|+...+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHm---V~-~qP~~al~ 308 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHT---AE-YRPNETFI 308 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCC---CC-cCHHHHHH
Confidence 4799999999999999998888888876200 0 1 1556667799999 24 58999999
Q ss_pred HHHHHHhc
Q 041488 394 PLMAFFKL 401 (402)
Q Consensus 394 ~i~~fl~~ 401 (402)
.+..|+..
T Consensus 309 m~~~fi~~ 316 (319)
T PLN02213 309 MFQRWISG 316 (319)
T ss_pred HHHHHHcC
Confidence 99999864
No 234
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.76 E-value=2.6 Score=39.80 Aligned_cols=95 Identities=16% Similarity=0.191 Sum_probs=58.1
Q ss_pred HHHHHHhCCCcEEeecCCCCcccCC--CCCCCCCCcccccccHHHHhhcchHHHHHHHHHH-hC---CcceEEecChhHH
Q 041488 106 LAFLLADNGYDVWLANTRGTKYSRG--HVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQ-TG---QKPHYVGHSLGTL 179 (402)
Q Consensus 106 ~~~~l~~~g~~v~~~D~rG~G~S~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~-~~---~~~~lvGhS~Gg~ 179 (402)
+...+ .+||.++.-|- ||..+.. ......+.+... +|...+..+...+-+.|.+. ++ ..-+..|.|-||-
T Consensus 52 ~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~--dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGR 127 (474)
T PF07519_consen 52 MATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALL--DFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGR 127 (474)
T ss_pred cchhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHH--HHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcc
Confidence 33444 68999999996 4433321 011011111111 11112222344444455443 44 4678999999999
Q ss_pred HHHHHhcCCCcccccchhhcccccccc
Q 041488 180 IALASFSKDQPVNKLRSAALLSPIAYV 206 (402)
Q Consensus 180 ~a~~~a~~~p~~~~v~~~v~~~p~~~~ 206 (402)
-++..|.++| +.+++++.-+|..++
T Consensus 128 qgl~~AQryP--~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 128 QGLMAAQRYP--EDFDGILAGAPAINW 152 (474)
T ss_pred hHHHHHHhCh--hhcCeEEeCCchHHH
Confidence 9999999988 999999999998653
No 235
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=87.27 E-value=1.4 Score=39.23 Aligned_cols=82 Identities=20% Similarity=0.215 Sum_probs=49.9
Q ss_pred cEEeecCC-CCcccCCCCCCCCCCcccccccHH-HHhhcchHHHHHHHHHHhC----CcceEEecChhHHHHHHHhcC--
Q 041488 116 DVWLANTR-GTKYSRGHVSLSPDDSAFWDWTWD-ELVAYDLPATLQHVHDQTG----QKPHYVGHSLGTLIALASFSK-- 187 (402)
Q Consensus 116 ~v~~~D~r-G~G~S~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~v~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~-- 187 (402)
+|+.+|.| |.|.|-...... ++-+ +.+ .|+-.+++.+.+.++ .++++.|-|+||.-+-.+|..
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~--------~~~d~~~a-~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~ 73 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPID--------KTGDISEV-KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEIS 73 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCC--------ccccHHHH-HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHH
Confidence 68899988 999986422110 0111 222 356666665555554 589999999999866555442
Q ss_pred --CC---c-ccccchhhcccccccc
Q 041488 188 --DQ---P-VNKLRSAALLSPIAYV 206 (402)
Q Consensus 188 --~p---~-~~~v~~~v~~~p~~~~ 206 (402)
.. . .-.++++++-+|...+
T Consensus 74 ~~n~~~~~~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 74 QGNYICCEPPINLQGYMLGNPVTYM 98 (319)
T ss_pred hhcccccCCceeeeEEEeCCCCCCc
Confidence 10 0 0257788877776543
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=87.08 E-value=1.6 Score=36.58 Aligned_cols=34 Identities=15% Similarity=0.187 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHh--CCcceEEecChhHHHHHHHhcC
Q 041488 154 LPATLQHVHDQT--GQKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 154 ~~~~v~~l~~~~--~~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
...+.+.+.... +++++++|+|+|+.++..++.+
T Consensus 33 ~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 33 VANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred HHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 334444555433 3789999999999999887655
No 237
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=86.59 E-value=0.58 Score=41.71 Aligned_cols=38 Identities=18% Similarity=0.313 Sum_probs=27.9
Q ss_pred CcceEEecChhHHHHHHHhcC---CCcccccchhhcccccc
Q 041488 167 QKPHYVGHSLGTLIALASFSK---DQPVNKLRSAALLSPIA 204 (402)
Q Consensus 167 ~~~~lvGhS~Gg~~a~~~a~~---~p~~~~v~~~v~~~p~~ 204 (402)
.|+.|+|||+|+-+...++.. ......|+.+++++.+.
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 689999999999998876643 21123578888887654
No 238
>PLN02209 serine carboxypeptidase
Probab=85.75 E-value=1.9 Score=40.24 Aligned_cols=64 Identities=9% Similarity=0.008 Sum_probs=50.1
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCC-------------------CCCc-eEEEECCCCCccceecccCcchhccH
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDH-------------------EGDK-LVVQYRQDYAHADYVMGENAGQVLYE 393 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~-------------------~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~~ 393 (402)
.++||+..|..|-+|+....+.+.+.+.-. ...+ .+++.+.++||+ .. .+|++..+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHm---Vp-~qP~~al~ 426 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHT---AE-YLPEESSI 426 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCC---cC-cCHHHHHH
Confidence 469999999999999998888888887520 0012 556678899999 34 59999999
Q ss_pred HHHHHHhc
Q 041488 394 PLMAFFKL 401 (402)
Q Consensus 394 ~i~~fl~~ 401 (402)
.+..|+..
T Consensus 427 m~~~fi~~ 434 (437)
T PLN02209 427 MFQRWISG 434 (437)
T ss_pred HHHHHHcC
Confidence 99999864
No 239
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=85.17 E-value=2.2 Score=39.80 Aligned_cols=135 Identities=14% Similarity=0.050 Sum_probs=76.7
Q ss_pred CCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccc---cccCCCCCCH-------HHHHH------hCCCcEEeecC
Q 041488 59 KDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVT---WLLLPPEQSL-------AFLLA------DNGYDVWLANT 122 (402)
Q Consensus 59 ~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~---~~~~~~~~~~-------~~~l~------~~g~~v~~~D~ 122 (402)
..+..+.+|.+.... .....|.||.+-|.++++.. |....|..-- ...|. .+-.+++.+|.
T Consensus 47 ~~~~~lfy~f~es~~---~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDq 123 (433)
T PLN03016 47 DENVQFFYYFIKSEN---NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQ 123 (433)
T ss_pred CCCeEEEEEEEecCC---CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecC
Confidence 346789999886543 33568999999999887663 2222221100 00111 12367999994
Q ss_pred -CCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC----CcceEEecChhHHHHHHHhcC----CC---c
Q 041488 123 -RGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG----QKPHYVGHSLGTLIALASFSK----DQ---P 190 (402)
Q Consensus 123 -rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~----~p---~ 190 (402)
-|.|.|....... + .-+.++. +|+..+++...+..+ .++++.|.|+||.-+-.+|.. .. .
T Consensus 124 PvGtGfSy~~~~~~-----~-~~d~~~a--~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 124 PVGSGFSYSKTPID-----K-TGDISEV--KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CCCCCccCCCCCCC-----c-cCCHHHH--HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 5999996422111 0 0011111 245455554444443 589999999999866555432 10 0
Q ss_pred -ccccchhhcccccc
Q 041488 191 -VNKLRSAALLSPIA 204 (402)
Q Consensus 191 -~~~v~~~v~~~p~~ 204 (402)
+-.++++++-+|..
T Consensus 196 ~~inLkGi~iGNg~t 210 (433)
T PLN03016 196 PPINLQGYMLGNPVT 210 (433)
T ss_pred CcccceeeEecCCCc
Confidence 12677888877754
No 240
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.91 E-value=0.92 Score=35.43 Aligned_cols=47 Identities=17% Similarity=0.106 Sum_probs=38.1
Q ss_pred HHHHHHHHHh-CCcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 156 ATLQHVHDQT-GQKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 156 ~~v~~l~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
+.-.+++++. .....+-|-||||..+..+.-+|| +.+.++|.++...
T Consensus 89 AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP--~lftkvialSGvY 136 (227)
T COG4947 89 AYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHP--HLFTKVIALSGVY 136 (227)
T ss_pred HHHHHHHHhhcCCCccccccchhhhhhhhhheeCh--hHhhhheeeccee
Confidence 4455666543 367788999999999999999999 9999999888764
No 241
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=83.37 E-value=0.82 Score=41.09 Aligned_cols=21 Identities=43% Similarity=0.642 Sum_probs=17.2
Q ss_pred CcceEEecChhHHHHHHHhcC
Q 041488 167 QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 167 ~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
.+|..+|||+||.++..+..+
T Consensus 150 ~kISfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 150 EKISFVGHSLGGLVARYAIGY 170 (405)
T ss_pred ceeeeeeeecCCeeeeEEEEe
Confidence 689999999999987665543
No 242
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.46 E-value=1.4 Score=41.60 Aligned_cols=31 Identities=26% Similarity=0.493 Sum_probs=20.6
Q ss_pred HHHHHHHHH-hC--CcceEEecChhHHHHHHHhc
Q 041488 156 ATLQHVHDQ-TG--QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 156 ~~v~~l~~~-~~--~~~~lvGhS~Gg~~a~~~a~ 186 (402)
.+++.+.+. .| .+++.+||||||.++=..+.
T Consensus 512 ~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 512 ELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred HHHHHHHHhccCCCCceEEEecccchHHHHHHHH
Confidence 344444433 23 58999999999988755443
No 243
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=80.88 E-value=2 Score=40.73 Aligned_cols=49 Identities=27% Similarity=0.269 Sum_probs=35.4
Q ss_pred CccEEEEEeCCCccCChhHH-HHHHHHccCCCC--CceEEEECCCCCcccee
Q 041488 334 DLPLFLSYGGADALSDVNDV-KLLLESLNDHEG--DKLVVQYRQDYAHADYV 382 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~ 382 (402)
..|.+|+||..|.++|.... +-++.......+ ...++++++++.|++-+
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf 606 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAF 606 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhh
Confidence 57999999999999998654 444443332211 24788999999999844
No 244
>PF03283 PAE: Pectinacetylesterase
Probab=79.03 E-value=1.9 Score=39.06 Aligned_cols=34 Identities=24% Similarity=0.176 Sum_probs=28.2
Q ss_pred chHHHHHHHHHH-hC--CcceEEecChhHHHHHHHhc
Q 041488 153 DLPATLQHVHDQ-TG--QKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 153 d~~~~v~~l~~~-~~--~~~~lvGhS~Gg~~a~~~a~ 186 (402)
-+.+++++++.. ++ ++++|-|-|.||.-++..+-
T Consensus 139 i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 139 ILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 577889999888 65 78999999999999877543
No 245
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=79.00 E-value=2.5 Score=43.56 Aligned_cols=98 Identities=19% Similarity=0.171 Sum_probs=57.8
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
...|+++|+|..-+..... ..++..| ..|-+|.-..... | .-|+++.+.+ .|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l------~~la~rl----------e~PaYglQ~T~~v--P------~dSies~A~~----yi 2172 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTAL------ESLASRL----------EIPAYGLQCTEAV--P------LDSIESLAAY----YI 2172 (2376)
T ss_pred ccCCceEEEeccccchHHH------HHHHhhc----------CCcchhhhccccC--C------cchHHHHHHH----HH
Confidence 4588999999977655433 2333322 2344444221111 1 1155555432 45
Q ss_pred HHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhhcccccc
Q 041488 159 QHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 159 ~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~ 204 (402)
+.+++--+ ++..++|.|+|+.++...+..-...+....+|+++...
T Consensus 2173 rqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2173 RQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred HHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 55555444 78999999999999988776522224556688887654
No 246
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=73.80 E-value=17 Score=31.88 Aligned_cols=101 Identities=13% Similarity=0.046 Sum_probs=56.1
Q ss_pred CCCcEEEecCccccccccccCCCCCC--HHHHHHh-CCCcEEeecCCCCcccCCCCC-----CCCCC--cccccccHHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQS--LAFLLAD-NGYDVWLANTRGTKYSRGHVS-----LSPDD--SAFWDWTWDEL 149 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~--~~~~l~~-~g~~v~~~D~rG~G~S~~~~~-----~~~~~--~~~~~~~~~~~ 149 (402)
.+..|+++-|... .+..+++.+- +...|.. .+-+++++=.+|.|--.-... .-++. .....+++
T Consensus 30 ~k~lV~CfDGT~n---rfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL--- 103 (423)
T COG3673 30 MKRLVFCFDGTWN---RFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGL--- 103 (423)
T ss_pred cceEEEEecCchh---hcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHH---
Confidence 3567888877432 2333322121 3333433 468888888888874311000 00000 00001111
Q ss_pred hhcchHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcC
Q 041488 150 VAYDLPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 150 ~~~d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
...+..+..++...+. ++|++.|+|-|+..+--+|..
T Consensus 104 -~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 104 -VQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred -HHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 2245667788888776 899999999999998776643
No 247
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=70.78 E-value=15 Score=31.95 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=28.1
Q ss_pred chHHHHHHHHHHhC--CcceEEecChhHHHHHHHhcC
Q 041488 153 DLPATLQHVHDQTG--QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 153 d~~~~v~~l~~~~~--~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
.+.....++.+.+. ++|+++|+|-|+++|-.++..
T Consensus 76 ~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 76 RIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 55666777777766 789999999999999887744
No 248
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=64.12 E-value=10 Score=35.41 Aligned_cols=38 Identities=21% Similarity=0.336 Sum_probs=28.5
Q ss_pred CcceEEecChhHHHHHHHhc---CCCcccccchhhcccccc
Q 041488 167 QKPHYVGHSLGTLIALASFS---KDQPVNKLRSAALLSPIA 204 (402)
Q Consensus 167 ~~~~lvGhS~Gg~~a~~~a~---~~p~~~~v~~~v~~~p~~ 204 (402)
.|+.|||+|+|+-+...++. +....+.|..+++++.+.
T Consensus 447 RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 447 RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 79999999999999886554 222335788888887654
No 249
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=63.09 E-value=18 Score=29.57 Aligned_cols=63 Identities=16% Similarity=0.314 Sum_probs=42.1
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCC-cEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGY-DVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~-~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
.....|++.||...++...+ ..+-..+.+.|| .|++.-.-|+- ++..+
T Consensus 136 k~e~~vlmgHGt~h~s~~~Y-----acLd~~~~~~~f~~v~v~~ve~yP--------------------------~~d~v 184 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAY-----ACLDHVLDEYGFDNVFVAAVEGYP--------------------------LVDTV 184 (265)
T ss_pred cCeEEEEEecCCCccHHHHH-----HHHHHHHHhcCCCceEEEEecCCC--------------------------cHHHH
Confidence 45678999999888777542 345556778888 67776665542 45567
Q ss_pred HHHHHHHhCCcceEE
Q 041488 158 LQHVHDQTGQKPHYV 172 (402)
Q Consensus 158 v~~l~~~~~~~~~lv 172 (402)
++++++.--..+.|+
T Consensus 185 i~~l~~~~~~~v~L~ 199 (265)
T COG4822 185 IEYLRKNGIKEVHLI 199 (265)
T ss_pred HHHHHHcCCceEEEe
Confidence 888876522555554
No 250
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=62.33 E-value=7.9 Score=30.82 Aligned_cols=47 Identities=23% Similarity=0.297 Sum_probs=34.0
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC--CCcccC
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR--GTKYSR 129 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r--G~G~S~ 129 (402)
+.++.+|++-|+.++..+=.. ..+.+.|.+.|++|+..|=- -||.+.
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA----~ale~~L~~~G~~~y~LDGDnvR~gL~~ 68 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIA----NALEEKLFAKGYHVYLLDGDNVRHGLNR 68 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHH----HHHHHHHHHcCCeEEEecChhHhhcccC
Confidence 456789999999988765322 45677788899999999942 245443
No 251
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=61.96 E-value=6.2 Score=29.47 Aligned_cols=32 Identities=19% Similarity=0.167 Sum_probs=23.7
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCC
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNG 114 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g 114 (402)
..+|.|+-+||+++.+.+|.. +-+++.|-..|
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~----~liA~~ly~~G 81 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVS----RLIAEHLYKSG 81 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHH----HHHHHHHHhcc
Confidence 557888899999999988754 45666655555
No 252
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=57.42 E-value=18 Score=32.22 Aligned_cols=29 Identities=28% Similarity=0.354 Sum_probs=23.3
Q ss_pred HHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 160 HVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 160 ~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+.+..| .+-.++|||+|=+.|+.++..-
T Consensus 76 ~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~l 105 (318)
T PF00698_consen 76 RLLRSWGIKPDAVIGHSLGEYAALVAAGAL 105 (318)
T ss_dssp HHHHHTTHCESEEEESTTHHHHHHHHTTSS
T ss_pred hhhcccccccceeeccchhhHHHHHHCCcc
Confidence 3345678 8999999999999999887653
No 253
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=53.16 E-value=88 Score=27.73 Aligned_cols=138 Identities=13% Similarity=-0.035 Sum_probs=75.6
Q ss_pred EcCCCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCC---------CCHHHHHHhCCCcEEeecCC-CCc
Q 041488 57 TTKDGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPE---------QSLAFLLADNGYDVWLANTR-GTK 126 (402)
Q Consensus 57 ~~~dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~---------~~~~~~l~~~g~~v~~~D~r-G~G 126 (402)
.-.++.+..+|.+..... ....+|-.+.+-|.++.+..-+-++.+ .+-...| +.-.++..|-| |.|
T Consensus 9 ~vr~~a~~F~wly~~~~~--~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWl--k~adllfvDnPVGaG 84 (414)
T KOG1283|consen 9 DVRTGAHMFWWLYYATAN--VKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWL--KDADLLFVDNPVGAG 84 (414)
T ss_pred eeecCceEEEEEeeeccc--cccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhh--hhccEEEecCCCcCc
Confidence 344667777776643320 113467788888877765543222210 0011123 22467777766 888
Q ss_pred ccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC----CcceEEecChhHHHHHHHhcCC-------Ccccccc
Q 041488 127 YSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG----QKPHYVGHSLGTLIALASFSKD-------QPVNKLR 195 (402)
Q Consensus 127 ~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~----~~~~lvGhS~Gg~~a~~~a~~~-------p~~~~v~ 195 (402)
.|--.. ..++.-+..+.+. |+..+++.+....+ .|++++..|+||=.+..++..- .....+.
T Consensus 85 fSyVdg------~~~Y~~~~~qia~-Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~ 157 (414)
T KOG1283|consen 85 FSYVDG------SSAYTTNNKQIAL-DLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFI 157 (414)
T ss_pred eeeecC------cccccccHHHHHH-HHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecce
Confidence 874211 1112224455544 77777776655433 5899999999999887766431 1123556
Q ss_pred hhhccccccc
Q 041488 196 SAALLSPIAY 205 (402)
Q Consensus 196 ~~v~~~p~~~ 205 (402)
++++-++...
T Consensus 158 ~VaLGDSWIS 167 (414)
T KOG1283|consen 158 GVALGDSWIS 167 (414)
T ss_pred eEEccCcccC
Confidence 6666555443
No 254
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=51.96 E-value=23 Score=31.53 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=24.8
Q ss_pred HHHHHHHHHhCCc-----ceEEecChhHHHHHHHhcCC
Q 041488 156 ATLQHVHDQTGQK-----PHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 156 ~~v~~l~~~~~~~-----~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+++.+.+.++.+ =.+.|.|+||.++..++...
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 4566666666633 25899999999999998754
No 255
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=51.22 E-value=2.1 Score=37.34 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=26.1
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecC
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANT 122 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~ 122 (402)
.-|.+++.||++.....- ...+..++..++.+...|.
T Consensus 48 ~~p~v~~~h~~~~~~~~~------~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQS------LGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred cCceEEeccCccccccCc------chHHHHhhhceeEEeeecc
Confidence 467788888888877764 3356677777777777664
No 256
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=49.41 E-value=46 Score=26.42 Aligned_cols=53 Identities=17% Similarity=0.199 Sum_probs=38.5
Q ss_pred HHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEecChhH
Q 041488 110 LADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVGHSLGT 178 (402)
Q Consensus 110 l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvGhS~Gg 178 (402)
|.+.|++.+++|.-+.=-...... . ..++...++.+++.++ +++.++..|.|.
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~~~-------i---------~~~~~~~~~~l~~~~~~~~v~IvSNsaGs 89 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYEDE-------I---------PPEYAEWLNELKKQFGKDRVLIVSNSAGS 89 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCcCc-------C---------CHHHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence 778999999999988643222111 1 2256677888888888 689999999874
No 257
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=48.58 E-value=23 Score=33.86 Aligned_cols=41 Identities=15% Similarity=0.284 Sum_probs=29.4
Q ss_pred cEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCcc
Q 041488 336 PLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHA 379 (402)
Q Consensus 336 Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 379 (402)
|+.|+...-|++..- ..-+++++++.+ ..+.+.++++.-|.
T Consensus 789 p~~i~ac~mDP~LDD--~vmfA~kLr~lG-~~v~l~vle~lPHG 829 (880)
T KOG4388|consen 789 PVHIVACAMDPMLDD--SVMFARKLRNLG-QPVTLRVLEDLPHG 829 (880)
T ss_pred CceEEEeccCcchhH--HHHHHHHHHhcC-CceeehhhhcCCcc
Confidence 788999999987753 344566666533 35788888888886
No 258
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=46.21 E-value=15 Score=30.82 Aligned_cols=31 Identities=13% Similarity=-0.030 Sum_probs=22.7
Q ss_pred cEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCC
Q 041488 83 PVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRG 124 (402)
Q Consensus 83 ~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG 124 (402)
.=||+.|-|.+.+. .+|+++||+|+.+|+--
T Consensus 45 ~rvLvPgCGkg~D~-----------~~LA~~G~~V~GvDlS~ 75 (226)
T PRK13256 45 SVCLIPMCGCSIDM-----------LFFLSKGVKVIGIELSE 75 (226)
T ss_pred CeEEEeCCCChHHH-----------HHHHhCCCcEEEEecCH
Confidence 35677776665543 27889999999999744
No 259
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=46.09 E-value=52 Score=27.07 Aligned_cols=59 Identities=10% Similarity=-0.075 Sum_probs=38.0
Q ss_pred HHHHhCCC-cEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhCCcceEEecCh----hHHHHH
Q 041488 108 FLLADNGY-DVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTGQKPHYVGHSL----GTLIAL 182 (402)
Q Consensus 108 ~~l~~~g~-~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~~~~~lvGhS~----Gg~~a~ 182 (402)
..+...|. +|+..|..+.... +.+ .+...+..+.++.+..++++|+|. |..++.
T Consensus 70 ~~l~~~G~d~V~~~~~~~~~~~----------------~~e-----~~a~al~~~i~~~~p~lVL~~~t~~~~~grdlap 128 (202)
T cd01714 70 REALAMGADRAILVSDRAFAGA----------------DTL-----ATAKALAAAIKKIGVDLILTGKQSIDGDTGQVGP 128 (202)
T ss_pred HHHHHcCCCEEEEEecccccCC----------------ChH-----HHHHHHHHHHHHhCCCEEEEcCCcccCCcCcHHH
Confidence 34445675 6888877764421 222 233445555555556899999998 888888
Q ss_pred HHhcC
Q 041488 183 ASFSK 187 (402)
Q Consensus 183 ~~a~~ 187 (402)
..|.+
T Consensus 129 rlAar 133 (202)
T cd01714 129 LLAEL 133 (202)
T ss_pred HHHHH
Confidence 87776
No 260
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=45.56 E-value=33 Score=30.11 Aligned_cols=25 Identities=32% Similarity=0.353 Sum_probs=21.2
Q ss_pred HHhC-CcceEEecChhHHHHHHHhcC
Q 041488 163 DQTG-QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 163 ~~~~-~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
...| .+-.++|||+|-+.++.++..
T Consensus 77 ~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 77 RSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHcCCcccEEEecCHHHHHHHHHhCC
Confidence 4567 788999999999999887765
No 261
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=45.19 E-value=13 Score=29.14 Aligned_cols=21 Identities=33% Similarity=0.441 Sum_probs=15.1
Q ss_pred HHHHHHhC-----CcceEEecChhHH
Q 041488 159 QHVHDQTG-----QKPHYVGHSLGTL 179 (402)
Q Consensus 159 ~~l~~~~~-----~~~~lvGhS~Gg~ 179 (402)
+.+.+.++ ++|.|+|-|++..
T Consensus 91 ~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 91 QQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp HHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred HHHHHhccCCCCCCEEEEEEecccCC
Confidence 77777663 5899999999987
No 262
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=44.41 E-value=36 Score=29.90 Aligned_cols=26 Identities=15% Similarity=-0.043 Sum_probs=21.3
Q ss_pred HHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 163 DQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 163 ~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
...| .+-.++|||+|=+.++.++..-
T Consensus 71 ~~~g~~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 71 LALLPRPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred HhcCCCCcEEeecCHHHHHHHHHhCCC
Confidence 4456 7889999999999999887653
No 263
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=44.37 E-value=16 Score=30.48 Aligned_cols=32 Identities=22% Similarity=0.034 Sum_probs=23.5
Q ss_pred CcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCC
Q 041488 82 LPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRG 124 (402)
Q Consensus 82 ~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG 124 (402)
+.=+|+.|-|.+.+. ..|+++||+|+.+|+--
T Consensus 38 ~~rvLvPgCG~g~D~-----------~~La~~G~~VvGvDls~ 69 (218)
T PF05724_consen 38 GGRVLVPGCGKGYDM-----------LWLAEQGHDVVGVDLSP 69 (218)
T ss_dssp SEEEEETTTTTSCHH-----------HHHHHTTEEEEEEES-H
T ss_pred CCeEEEeCCCChHHH-----------HHHHHCCCeEEEEecCH
Confidence 346888887776553 37889999999998743
No 264
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=43.67 E-value=1.4e+02 Score=28.43 Aligned_cols=53 Identities=23% Similarity=0.224 Sum_probs=36.4
Q ss_pred chHHHHHHHHHH---hC---CcceEEecChhHHHHHHHhcCCCcccccchhhccccccc
Q 041488 153 DLPATLQHVHDQ---TG---QKPHYVGHSLGTLIALASFSKDQPVNKLRSAALLSPIAY 205 (402)
Q Consensus 153 d~~~~v~~l~~~---~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v~~~p~~~ 205 (402)
|..-+++++.+. +| .++.|+|.|.|+.-+..-+...+....++..|+-+....
T Consensus 198 DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 198 DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 666678888775 34 589999999999876554443333356788887766543
No 265
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=43.31 E-value=31 Score=30.12 Aligned_cols=22 Identities=32% Similarity=0.347 Sum_probs=19.1
Q ss_pred CcceEEecChhHHHHHHHhcCC
Q 041488 167 QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 167 ~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+-.++|||+|=+.++.++..-
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred CCCEEeecCHHHHHHHHHhCCC
Confidence 6889999999999999888763
No 266
>COG5353 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.13 E-value=23 Score=27.00 Aligned_cols=10 Identities=30% Similarity=0.288 Sum_probs=4.5
Q ss_pred CcchhhhHHH
Q 041488 1 MKTKKLKTAN 10 (402)
Q Consensus 1 m~~~~~~~~~ 10 (402)
|++|..+++.
T Consensus 1 ~Rkk~~~~i~ 10 (161)
T COG5353 1 MRKKHLIIII 10 (161)
T ss_pred CCceEeeeeh
Confidence 5554333333
No 267
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=41.13 E-value=43 Score=27.57 Aligned_cols=46 Identities=24% Similarity=0.138 Sum_probs=28.9
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC--CCccc
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR--GTKYS 128 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r--G~G~S 128 (402)
..+|++++||..+..-.... -..+...|.+.|..+...-++ |||..
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~---s~~~~~~L~~~g~~~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQ---SLRLYNALRKAGKPVELLIFPGEGHGFG 190 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHH---HHHHHHHHHHTTSSEEEEEETT-SSSTT
T ss_pred CCCCEEEEccCCCCccCHHH---HHHHHHHHHhcCCCEEEEEcCcCCCCCC
Confidence 47899999998765432211 134677788888765555555 55433
No 268
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=40.04 E-value=40 Score=32.56 Aligned_cols=26 Identities=23% Similarity=0.144 Sum_probs=22.5
Q ss_pred HHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 163 DQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 163 ~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
+..| .+-.++|||+|=+.++..+.--
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 5677 8889999999999999988764
No 269
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=39.42 E-value=40 Score=29.90 Aligned_cols=30 Identities=33% Similarity=0.449 Sum_probs=23.0
Q ss_pred HHHHHHHh-C-CcceEEecChhHHHHHHHhcC
Q 041488 158 LQHVHDQT-G-QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 158 v~~l~~~~-~-~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
.+.+.++. + .+.++.|||+|=+.++.++..
T Consensus 74 ~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag~ 105 (310)
T COG0331 74 YRVLAEQGLGVKPDFVAGHSLGEYSALAAAGV 105 (310)
T ss_pred HHHHHHhcCCCCCceeecccHhHHHHHHHccc
Confidence 34444445 5 788999999999999998874
No 270
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=37.90 E-value=23 Score=27.10 Aligned_cols=43 Identities=23% Similarity=0.183 Sum_probs=29.6
Q ss_pred cEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccC
Q 041488 83 PVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSR 129 (402)
Q Consensus 83 ~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~ 129 (402)
|+|.+-|...+.-+... ..+...|.++||+|.++=.-+||...
T Consensus 1 pvv~VvG~~~sGKTTl~----~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLI----RKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHH----HHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHH----HHHHHHHhHcCCceEEEEEccCCCcc
Confidence 57888888777776655 67888888999999877777776554
No 271
>PRK12467 peptide synthase; Provisional
Probab=37.61 E-value=89 Score=38.87 Aligned_cols=85 Identities=18% Similarity=0.095 Sum_probs=53.3
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHH
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQH 160 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~ 160 (402)
.+.+++.|....+...+ ..+...+ ..+..|+.+..++.-.-.. . ..+++++.. ...++
T Consensus 3692 ~~~l~~~h~~~r~~~~~------~~l~~~l-~~~~~~~~l~~~~~~~d~~-~----------~~~~~~~~~----~y~~~ 3749 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDY------EPLAVIL-EGDRHVLGLTCRHLLDDGW-Q----------DTSLQAMAV----QYADY 3749 (3956)
T ss_pred ccceeeechhhcchhhh------HHHHHHh-CCCCcEEEEeccccccccC-C----------ccchHHHHH----HHHHH
Confidence 35699999988776544 4566656 4567888887766432111 0 114444432 23455
Q ss_pred HHHHhC-CcceEEecChhHHHHHHHhcC
Q 041488 161 VHDQTG-QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 161 l~~~~~-~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
++..-. .+..+.|+|+||.++...+..
T Consensus 3750 ~~~~~~~~p~~l~g~s~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3750 ILWQQAKGPYGLLGWSLGGTLARLVAEL 3777 (3956)
T ss_pred HHHhccCCCeeeeeeecchHHHHHHHHH
Confidence 554444 688999999999999876653
No 272
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=36.48 E-value=81 Score=26.15 Aligned_cols=40 Identities=13% Similarity=-0.000 Sum_probs=26.9
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhC-CCcEEeecCCC
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADN-GYDVWLANTRG 124 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~D~rG 124 (402)
.++.|+++.=.......+. ..+...|.+. |+.+..++...
T Consensus 30 ~~~~i~~IptAs~~~~~~~-----~~~~~a~~~l~G~~~~~~~~~~ 70 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYT-----ARFYAAFESLRGVEVSHLHLFD 70 (212)
T ss_pred CCCeEEEECCCCCCHHHHH-----HHHHHHHhhccCcEEEEEeccC
Confidence 3567888877666443331 4566777788 99988887654
No 273
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.28 E-value=26 Score=30.33 Aligned_cols=38 Identities=24% Similarity=0.227 Sum_probs=28.3
Q ss_pred CcceEEecChhHHHHHHHhcCCC-cccccchhhcccccc
Q 041488 167 QKPHYVGHSLGTLIALASFSKDQ-PVNKLRSAALLSPIA 204 (402)
Q Consensus 167 ~~~~lvGhS~Gg~~a~~~a~~~p-~~~~v~~~v~~~p~~ 204 (402)
.+++|.|.|+|++-+........ ..+++++.++.+|..
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 47999999999988777554421 125789999888865
No 274
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=35.33 E-value=1e+02 Score=24.93 Aligned_cols=53 Identities=15% Similarity=-0.050 Sum_probs=31.9
Q ss_pred CCcEEEEEEecCCCCCCCCCCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcE------Eeec
Q 041488 60 DGYILSMQRIPVGRSGGEPGNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDV------WLAN 121 (402)
Q Consensus 60 dG~~l~~~~~~~~~~~~~~~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v------~~~D 121 (402)
+|..+.|..|...+ ..++-..|-+.-|++...+.. ..+...|.++|+.+ +.++
T Consensus 43 ~~~~~~y~~~~~~~---l~GKV~lvn~~Aswc~~c~~e------~P~l~~l~~~~~~~~~y~~t~~IN 101 (184)
T TIGR01626 43 SGKDTVYQPWGSAE---LAGKVRVVHHIAGRTSAKEXN------ASLIDAIKAAKFPPVKYQTTTIIN 101 (184)
T ss_pred cCCcccceeccHHH---cCCCEEEEEEEecCCChhhcc------chHHHHHHHcCCCcccccceEEEE
Confidence 34456666665443 112233455566777666654 56777888888888 6665
No 275
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=35.28 E-value=56 Score=28.98 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=24.6
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+++.+.++ + ..=.++|-|+|+.++..|++..
T Consensus 32 GvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEA-GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 345555544 6 6667999999999999999874
No 276
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=35.02 E-value=53 Score=29.12 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=23.0
Q ss_pred HHHHHHHHHhCCc-----ceEEecChhHHHHHHHhcC
Q 041488 156 ATLQHVHDQTGQK-----PHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 156 ~~v~~l~~~~~~~-----~~lvGhS~Gg~~a~~~a~~ 187 (402)
.+++.+.+..+.+ =.+.|-|.||.+|+.++..
T Consensus 25 ~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~~ 61 (308)
T cd07211 25 EILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGLK 61 (308)
T ss_pred HHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhcc
Confidence 3456666665533 2489999999999998763
No 277
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=34.64 E-value=3.5e+02 Score=24.41 Aligned_cols=39 Identities=8% Similarity=0.030 Sum_probs=28.7
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCC--CcEEeecCCCC
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNG--YDVWLANTRGT 125 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g--~~v~~~D~rG~ 125 (402)
.+++=+|+||.+..... -.+.++|.+++ ..|+..|.-+.
T Consensus 210 ~g~vDi~V~gaGTGGTi-------tgvGRylke~~~~~kVv~vdp~~S 250 (362)
T KOG1252|consen 210 DGKVDIFVAGAGTGGTI-------TGVGRYLKEQNPNIKVVGVDPQES 250 (362)
T ss_pred cCCCCEEEeccCCCcee-------echhHHHHHhCCCCEEEEeCCCcc
Confidence 46677889998877664 46778887764 78888887663
No 278
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=34.39 E-value=80 Score=25.05 Aligned_cols=33 Identities=18% Similarity=0.241 Sum_probs=25.3
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCC
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQ 189 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p 189 (402)
.+++.+.++ + ..-.+.|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 345555554 5 66789999999999999998753
No 279
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=34.23 E-value=1.4e+02 Score=25.69 Aligned_cols=75 Identities=23% Similarity=0.285 Sum_probs=46.2
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCc-EEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHH
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYD-VWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPAT 157 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~-v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 157 (402)
..+.||++--|...+...| ...++.+.+.|-. +++ =.||. |.-... ... .-|+..
T Consensus 130 ~~gkPVilk~G~~~t~~e~------~~Ave~i~~~Gn~~i~l-~~rG~--s~y~~~-~~~-------------~~dl~~- 185 (260)
T TIGR01361 130 KQGKPVLLKRGMGNTIEEW------LYAAEYILSSGNGNVIL-CERGI--RTFEKA-TRN-------------TLDLSA- 185 (260)
T ss_pred cCCCcEEEeCCCCCCHHHH------HHHHHHHHHcCCCcEEE-EECCC--CCCCCC-CcC-------------CcCHHH-
Confidence 3577999999999888888 6778888888864 444 34443 221000 000 013332
Q ss_pred HHHHHHHhCCcceE-EecChh
Q 041488 158 LQHVHDQTGQKPHY-VGHSLG 177 (402)
Q Consensus 158 v~~l~~~~~~~~~l-vGhS~G 177 (402)
+..+++.++-++.+ -+||.|
T Consensus 186 i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 186 VPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred HHHHHHhhCCCEEEcCCCCCC
Confidence 44555556668888 899988
No 280
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=34.15 E-value=71 Score=25.82 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=24.6
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+++.+.++ + ..=.++|-|.||.++..++...
T Consensus 16 Gvl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEA-GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHc-CCCcceEEEECHHHHHHHHHHcCC
Confidence 456666544 5 5678999999999999998864
No 281
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=33.99 E-value=30 Score=27.10 Aligned_cols=38 Identities=26% Similarity=0.204 Sum_probs=27.2
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecC
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANT 122 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~ 122 (402)
++.||++-|..++..+=.. ..+...|.+.|+.|+.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA----~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLA----RALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHH----HHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHH----HHHHHHHHHcCCcEEEecC
Confidence 3578999999888765322 4566777789999999984
No 282
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=32.71 E-value=59 Score=30.38 Aligned_cols=40 Identities=13% Similarity=0.223 Sum_probs=28.1
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhh
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAA 198 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v 198 (402)
.+++.+.++ + .+-++.|-|.|+.++..++...+ +.+..++
T Consensus 90 GVLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~--eel~~~l 130 (421)
T cd07230 90 GVLKALFEA-NLLPRIISGSSAGSIVAAILCTHTD--EEIPELL 130 (421)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCH--HHHHHHH
Confidence 345555543 4 45589999999999999998754 5554444
No 283
>PRK03147 thiol-disulfide oxidoreductase; Provisional
Probab=32.58 E-value=69 Score=25.22 Aligned_cols=18 Identities=17% Similarity=0.204 Sum_probs=10.7
Q ss_pred HHHHHHhCCCcEEeecCC
Q 041488 106 LAFLLADNGYDVWLANTR 123 (402)
Q Consensus 106 ~~~~l~~~g~~v~~~D~r 123 (402)
+...+.+.+..++.++.-
T Consensus 86 ~~~~~~~~~~~vi~i~~d 103 (173)
T PRK03147 86 LYPKYKEKGVEIIAVNVD 103 (173)
T ss_pred HHHHhhcCCeEEEEEEcC
Confidence 344444456788888553
No 284
>PRK15222 putative pilin structural protein SafD; Provisional
Probab=32.38 E-value=2.4e+02 Score=21.92 Aligned_cols=17 Identities=29% Similarity=0.251 Sum_probs=12.5
Q ss_pred CCCCcEEEecCcccccc
Q 041488 79 GNRLPVFLQHGLLMDAV 95 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~ 95 (402)
+.+|-..+++|-..+..
T Consensus 79 gg~p~~Yil~G~~ds~h 95 (156)
T PRK15222 79 GNTPTVLLLSGQQDPRH 95 (156)
T ss_pred CCCccEEEEECCCCCcc
Confidence 55788888998766643
No 285
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.16 E-value=57 Score=27.05 Aligned_cols=37 Identities=27% Similarity=0.299 Sum_probs=27.9
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR 123 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r 123 (402)
..++.|++-|.....-- ..++..|++.||.|++--.+
T Consensus 5 ~~~k~VlItgcs~GGIG-------~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIG-------YALAKEFARNGYLVYATARR 41 (289)
T ss_pred cCCCeEEEeecCCcchh-------HHHHHHHHhCCeEEEEEccc
Confidence 45678888876655543 47899999999999997654
No 286
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=31.34 E-value=86 Score=26.80 Aligned_cols=41 Identities=20% Similarity=0.317 Sum_probs=31.6
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCC
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGT 125 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~ 125 (402)
+.+.||++--|...+...| ...++++.+.|-.=+++=.||.
T Consensus 120 ~tgkPVilk~G~~~t~~e~------~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEY------LGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred ccCCeEEEeCCCCCCHHHH------HHHHHHHHHcCCCeEEEEcccc
Confidence 4578999999988888888 6788888888875455556664
No 287
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=30.78 E-value=79 Score=27.19 Aligned_cols=43 Identities=23% Similarity=0.196 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHhCCcc-eEEecChhHHHHHHHhcCCCcccccchhh
Q 041488 154 LPATLQHVHDQTGQKP-HYVGHSLGTLIALASFSKDQPVNKLRSAA 198 (402)
Q Consensus 154 ~~~~v~~l~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v 198 (402)
.+.+++.++..-..++ .++|.|+|+.-+..|.+..+ .+-++++
T Consensus 26 TAGVLD~fl~a~~~~f~~~~GvSAGA~n~~aYls~Q~--gra~~~~ 69 (292)
T COG4667 26 TAGVLDEFLRANFNPFDLVVGVSAGALNLVAYLSKQR--GRARRVI 69 (292)
T ss_pred hHHHHHHHHHhccCCcCeeeeecHhHHhHHHHhhcCC--chHHHHH
Confidence 3456777764333343 58999999999999999866 6555555
No 288
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=29.97 E-value=61 Score=29.95 Aligned_cols=66 Identities=12% Similarity=0.145 Sum_probs=35.3
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
..|++|+.|.-|.+- .+....+.+.+..++ -..-.+.+|+.|+.+-.--.+..+...+.|++||..
T Consensus 189 p~P~VIv~gGlDs~q-eD~~~l~~~~l~~rG-iA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQ-EDLYRLFRDYLAPRG-IAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp -EEEEEEE--TTS-G-GGGHHHHHCCCHHCT--EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcchhH-HHHHHHHHHHHHhCC-CEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhc
Confidence 579999999999664 344444445443211 123445689998863111123346788999999864
No 289
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=29.24 E-value=1.4e+02 Score=25.26 Aligned_cols=95 Identities=15% Similarity=0.080 Sum_probs=47.0
Q ss_pred CCcEEEecCcccc--ccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccCCCCCCCCCC---cccccccHH-HHhhcch
Q 041488 81 RLPVFLQHGLLMD--AVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSRGHVSLSPDD---SAFWDWTWD-ELVAYDL 154 (402)
Q Consensus 81 ~~~vll~HG~~~~--~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~~~~~~~~~~---~~~~~~~~~-~~~~~d~ 154 (402)
++.|+|++=.... ...|. +..-..+.+.|+.|..++...- ..... ...+- ..-..+.+. .+....+
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~-----~~~~~af~~lG~~v~~l~~~~d--~~~~l-~~ad~I~v~GGnt~~l~~~l~~~gl 102 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYT-----AKVAEALAPLGIEVTGIHRVAD--PVAAI-ENAEAIFVGGGNTFQLLKQLYERGL 102 (233)
T ss_pred CCeEEEECCCCCCCCHHHHH-----HHHHHHHHHCCCEEEEeccchh--hHHHH-hcCCEEEECCccHHHHHHHHHHCCc
Confidence 5678888876533 22331 3455677788999888876531 00000 00000 000011111 1111122
Q ss_pred HHHHHHHHHHhCCcceEEecChhHHHHHHHhc
Q 041488 155 PATLQHVHDQTGQKPHYVGHSLGTLIALASFS 186 (402)
Q Consensus 155 ~~~v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~ 186 (402)
.. .|++.......++|.|.|+.++.....
T Consensus 103 ~~---~l~~~~~~G~~~~G~SAGAii~~~~i~ 131 (233)
T PRK05282 103 LA---PIREAVKNGTPYIGWSAGANVAGPTIR 131 (233)
T ss_pred HH---HHHHHHHCCCEEEEECHHHHhhhccce
Confidence 22 333333335789999999988665443
No 290
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=29.02 E-value=34 Score=27.58 Aligned_cols=22 Identities=32% Similarity=0.306 Sum_probs=17.3
Q ss_pred CCHHHHHHhCCCcEEeecCCCC
Q 041488 104 QSLAFLLADNGYDVWLANTRGT 125 (402)
Q Consensus 104 ~~~~~~l~~~g~~v~~~D~rG~ 125 (402)
..++..|+++|++|+++|.=..
T Consensus 17 ~~la~~la~~g~~VlliD~D~~ 38 (195)
T PF01656_consen 17 ANLAQALARKGKKVLLIDLDPQ 38 (195)
T ss_dssp HHHHHHHHHTTS-EEEEEESTT
T ss_pred HHHHhccccccccccccccCcc
Confidence 4688899999999999998443
No 291
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=28.92 E-value=71 Score=29.68 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=29.1
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhh
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAA 198 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v 198 (402)
.+++.+.++ + .+=++.|-|.|+.++..++...+ +.+..++
T Consensus 84 GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~--~el~~~~ 124 (407)
T cd07232 84 GVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTD--EELKQLL 124 (407)
T ss_pred HHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCH--HHHHHHH
Confidence 455665554 5 56679999999999999998754 6665554
No 292
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=28.82 E-value=1e+02 Score=25.80 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=24.1
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+++.+.+. + ..-.++|-|.|+.++..++...
T Consensus 17 GvL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 17 GFLAALLEM-GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHHc-CCCceEEEEeCHHHHHHHHHHcCC
Confidence 345555543 5 5567999999999999998764
No 293
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=28.75 E-value=33 Score=27.80 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=22.6
Q ss_pred CCcEEEecCc---cccccccccCCCCCCHHHHHHhCCCcEEeec
Q 041488 81 RLPVFLQHGL---LMDAVTWLLLPPEQSLAFLLADNGYDVWLAN 121 (402)
Q Consensus 81 ~~~vll~HG~---~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D 121 (402)
...||++|-. ..+.... ..+...|.++||+++.++
T Consensus 151 ~g~Iil~Hd~~~~~~t~~~l------~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 151 PGDIILLHASDSAKQTVKAL------PTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCCEEEEeCCCCcHhHHHHH------HHHHHHHHHCCCEEEEHH
Confidence 3469999942 1122222 457778889999988764
No 294
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=28.67 E-value=1.7e+02 Score=25.64 Aligned_cols=53 Identities=25% Similarity=0.352 Sum_probs=28.6
Q ss_pred HHHhCCCc--EEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhCCcceEEecChhHHHH
Q 041488 109 LLADNGYD--VWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTGQKPHYVGHSLGTLIA 181 (402)
Q Consensus 109 ~l~~~g~~--v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~~~~~lvGhS~Gg~~a 181 (402)
.+.+.|.. =+++|. |+|.+.. .++- ..+..-++.+. .+ +-.+++|+|-=.++.
T Consensus 171 ~a~~~GI~~~~IilDP-GiGF~k~---------------~~~n--~~ll~~l~~l~-~l-g~Pilvg~SRKsfig 225 (282)
T PRK11613 171 RCEAAGIAKEKLLLDP-GFGFGKN---------------LSHN--YQLLARLAEFH-HF-NLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHcCCChhhEEEeC-CCCcCCC---------------HHHH--HHHHHHHHHHH-hC-CCCEEEEecccHHHH
Confidence 35567885 778887 6665441 1111 12222233332 23 356899999666554
No 295
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=28.30 E-value=92 Score=27.04 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=24.4
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+++.+.+ .+ ..=.+.|-|+|+.++..|+...
T Consensus 27 GVL~aLeE-~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEE-AGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHH-cCCCccEEEEECHHHHHHHHHHcCC
Confidence 34566644 46 5667999999999999999874
No 296
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=28.27 E-value=48 Score=27.66 Aligned_cols=15 Identities=27% Similarity=0.313 Sum_probs=13.0
Q ss_pred HHHhCCCcEEeecCC
Q 041488 109 LLADNGYDVWLANTR 123 (402)
Q Consensus 109 ~l~~~g~~v~~~D~r 123 (402)
.|+++||.|+++|.-
T Consensus 54 ~LA~~G~~V~avD~s 68 (218)
T PRK13255 54 WLAEQGHEVLGVELS 68 (218)
T ss_pred HHHhCCCeEEEEccC
Confidence 678899999999964
No 297
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.93 E-value=1e+02 Score=25.56 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=25.0
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCC
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQ 189 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p 189 (402)
.+++.+.+. + ..-.+.|.|.|+.++..+++..+
T Consensus 15 Gvl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 345555554 5 55689999999999999998753
No 298
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=27.67 E-value=39 Score=24.66 Aligned_cols=37 Identities=24% Similarity=0.297 Sum_probs=28.0
Q ss_pred EEEecCccccccccccCCCCCCHHHHHHhC-CCcEEeecC--CCCccc
Q 041488 84 VFLQHGLLMDAVTWLLLPPEQSLAFLLADN-GYDVWLANT--RGTKYS 128 (402)
Q Consensus 84 vll~HG~~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~D~--rG~G~S 128 (402)
||++.|.++++-+ .++..|++. |+.++..|- +-.+..
T Consensus 1 vI~I~G~~gsGKS--------T~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGKS--------TLAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSHH--------HHHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCHH--------HHHHHHHHHHCCeEEEecceEEecccc
Confidence 6888898888875 477788876 999999988 444433
No 299
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=27.57 E-value=84 Score=18.87 Aligned_cols=8 Identities=25% Similarity=0.376 Sum_probs=3.4
Q ss_pred CcchhhhH
Q 041488 1 MKTKKLKT 8 (402)
Q Consensus 1 m~~~~~~~ 8 (402)
|.++.+..
T Consensus 1 MmKk~i~~ 8 (48)
T PRK10081 1 MVKKTIAA 8 (48)
T ss_pred ChHHHHHH
Confidence 44444433
No 300
>COG0218 Predicted GTPase [General function prediction only]
Probab=27.20 E-value=1e+02 Score=25.30 Aligned_cols=61 Identities=16% Similarity=0.187 Sum_probs=33.6
Q ss_pred CccEEEEEeCCCccCChhHH---HHHHHHccCCCCCceEEEECCCCCccceecccCcchhccHHHHHHHhc
Q 041488 334 DLPLFLSYGGADALSDVNDV---KLLLESLNDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFKL 401 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~ 401 (402)
.+|++++.-..|.+-.-+.. ..+.+.+.........++.++-.... .-+++.+.|..|+..
T Consensus 135 ~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~-------Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 135 GIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKK-------GIDELKAKILEWLKE 198 (200)
T ss_pred CCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEeccccc-------CHHHHHHHHHHHhhc
Confidence 68999999999988654443 33343333211111113333322222 246777788877753
No 301
>PRK10279 hypothetical protein; Provisional
Probab=26.48 E-value=89 Score=27.64 Aligned_cols=32 Identities=19% Similarity=0.332 Sum_probs=25.1
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+++.+.+ .+ ..-.++|-|+|+.++..|++..
T Consensus 22 GVL~aL~E-~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 22 GVINALKK-VGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHH-cCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 34566655 46 6778999999999999999874
No 302
>PRK15219 carbonic anhydrase; Provisional
Probab=26.30 E-value=77 Score=27.03 Aligned_cols=32 Identities=19% Similarity=0.222 Sum_probs=25.8
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHH
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALAS 184 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~ 184 (402)
|+...++|....++ +.|+++|||-=|.+...+
T Consensus 128 ~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 128 DLLGSMEFACAVAGAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred chhhHHHHHHHHcCCCEEEEecCCcchHHHHHH
Confidence 56678999999999 899999999766655444
No 303
>PLN02633 palmitoyl protein thioesterase family protein
Probab=26.08 E-value=1.2e+02 Score=26.89 Aligned_cols=60 Identities=15% Similarity=0.198 Sum_probs=32.5
Q ss_pred CccEEEEEeCCCccCChh--HHHHHHHHccCCCCCceEEEECCCCCccceecc-cCcchhccHHHH
Q 041488 334 DLPLFLSYGGADALSDVN--DVKLLLESLNDHEGDKLVVQYRQDYAHADYVMG-ENAGQVLYEPLM 396 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~i~ 396 (402)
..|+.++||-.|....+. ...++.+.+++ .....+.+-+.-..+|+.+ .++-+.+++.|.
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g---~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~ 87 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSG---SPGFCLEIGNGVGDSWLMPLTQQAEIACEKVK 87 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCC---CceEEEEECCCccccceeCHHHHHHHHHHHHh
Confidence 689999999999887652 23334444544 2233344444344444432 233444444444
No 304
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=25.96 E-value=48 Score=26.33 Aligned_cols=35 Identities=23% Similarity=0.136 Sum_probs=25.9
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEe
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWL 119 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~ 119 (402)
...+.|+++-|-+.|...= -..+++|...|+.|.+
T Consensus 23 ~~~~~v~il~G~GnNGgDg------l~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDG------LVAARHLANRGYNVTV 57 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHH------HHHHHHHHHTTCEEEE
T ss_pred cCCCeEEEEECCCCChHHH------HHHHHHHHHCCCeEEE
Confidence 3467788888888777653 3688999999999888
No 305
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=25.54 E-value=48 Score=27.78 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=24.3
Q ss_pred CCcEEEecCccc-cccccccCCCCCCHHHHHHhCCCcEEeec
Q 041488 81 RLPVFLQHGLLM-DAVTWLLLPPEQSLAFLLADNGYDVWLAN 121 (402)
Q Consensus 81 ~~~vll~HG~~~-~~~~~~~~~~~~~~~~~l~~~g~~v~~~D 121 (402)
...||++|.... +.... ..+...|.++||+++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL------~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEAL------DKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHH------HHHHHHHHHCCCEEEEhH
Confidence 457999997432 22222 567888889999988765
No 306
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=25.01 E-value=50 Score=28.48 Aligned_cols=13 Identities=38% Similarity=0.580 Sum_probs=11.7
Q ss_pred CcceEEecChhHH
Q 041488 167 QKPHYVGHSLGTL 179 (402)
Q Consensus 167 ~~~~lvGhS~Gg~ 179 (402)
..|+++|||+|..
T Consensus 235 ~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 235 DEIIIYGHSLGEV 247 (270)
T ss_pred CEEEEEeCCCchh
Confidence 6899999999975
No 307
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=24.78 E-value=84 Score=25.98 Aligned_cols=44 Identities=20% Similarity=0.244 Sum_probs=27.1
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcc
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKY 127 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~ 127 (402)
+.+|+++||-.+..--... .+...+.|.+.|.+|-.-.++|-|-
T Consensus 155 ~~pi~~~hG~~D~vvp~~~---~~~~~~~L~~~~~~v~~~~~~g~gH 198 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEW---AEKTAEFLKAAGANVEFHEYPGGGH 198 (216)
T ss_dssp TS-EEEEEETT-SSSTHHH---HHHHHHHHHCTT-GEEEEEETT-SS
T ss_pred CCcEEEEecCCCCcccHHH---HHHHHHHHHhcCCCEEEEEcCCCCC
Confidence 6689999998776432211 1456777888888887777776453
No 308
>PF08257 Sulfakinin: Sulfakinin family; InterPro: IPR013259 The sulfakinin (SK) family of neuropeptides have only been identified in crustaceans and insects. For most species there is the potential for producing two sulfakinin peptides, one has a short sulfakinin sequence. The function of the sulfakinins is difficult to assess. For the Periplaneta americana (American cockroach), various forms of the endogenous sulfakinins have been shown to be active on the hindgut, and also on the heart. In Calliphora vomitoria (Blue blowfly) the peptides act as neurotransmitters or neuromodulators, linking the brain with all thoracic and abdominal ganglia. In adults of Penaeus monodon (Penoeid shrimp) they appear to be restricted to a few neurones in the brain with a neural pathway extending along to the ventral thoracic and abdominal ganglia [].
Probab=24.45 E-value=40 Score=12.22 Aligned_cols=6 Identities=50% Similarity=1.066 Sum_probs=4.2
Q ss_pred CCCCcc
Q 041488 374 QDYAHA 379 (402)
Q Consensus 374 ~~~gH~ 379 (402)
++.||+
T Consensus 2 ~dyghm 7 (9)
T PF08257_consen 2 DDYGHM 7 (9)
T ss_pred Cccccc
Confidence 567886
No 309
>PRK11460 putative hydrolase; Provisional
Probab=24.44 E-value=1.5e+02 Score=25.00 Aligned_cols=45 Identities=20% Similarity=0.080 Sum_probs=27.7
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC--CCcc
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR--GTKY 127 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r--G~G~ 127 (402)
...+|+++||..+..-.+.. ...+...|.+.|..|-..-++ ||+.
T Consensus 147 ~~~pvli~hG~~D~vvp~~~---~~~~~~~L~~~g~~~~~~~~~~~gH~i 193 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAH---AVAAQEALISLGGDVTLDIVEDLGHAI 193 (232)
T ss_pred CCCcEEEEecCCCCccCHHH---HHHHHHHHHHCCCCeEEEEECCCCCCC
Confidence 46789999998776543211 135666777777765554444 5554
No 310
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=24.44 E-value=1.1e+02 Score=27.34 Aligned_cols=40 Identities=13% Similarity=0.248 Sum_probs=27.8
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCCCcccccchhh
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKDQPVNKLRSAA 198 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~v~~~v 198 (402)
.+++.+.++ + .+-++.|-|.|+.++..++...+ +.+..+.
T Consensus 85 GVlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~t~--~El~~~~ 125 (323)
T cd07231 85 GVVRTLVEH-QLLPRVIAGSSVGSIVCAIIATRTD--EELQSFF 125 (323)
T ss_pred HHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCH--HHHHHHH
Confidence 345555544 5 56679999999999999988643 5555444
No 311
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=24.19 E-value=85 Score=28.89 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=29.2
Q ss_pred EEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCCCcccC
Q 041488 84 VFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRGTKYSR 129 (402)
Q Consensus 84 vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG~G~S~ 129 (402)
|||+|+..... | +.+++.|.++|+.|.++-..+.+...
T Consensus 2 il~~~~~~p~~--~------~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFPGQ--F------RHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCchh--H------HHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 78999865544 3 67999999999999888777765433
No 312
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=24.14 E-value=1.6e+02 Score=20.23 Aligned_cols=35 Identities=14% Similarity=0.079 Sum_probs=29.0
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHHhcC
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
+...+++.+++.+| +.|.+.|.+....+|..+..-
T Consensus 28 ~~~~~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVeA 63 (84)
T PF07643_consen 28 GPAAWVDGLRQALGPQDVTVYGIPADSHFARVLVEA 63 (84)
T ss_pred CHHHHHHHHHHHhCCceeEEEccCCccHHHHHHHHh
Confidence 45567888999999 999999999999998776543
No 313
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=24.08 E-value=1.5e+02 Score=23.63 Aligned_cols=32 Identities=19% Similarity=0.361 Sum_probs=24.1
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+++.+.++ + ..=.+.|-|.|+.++..++...
T Consensus 17 Gvl~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 17 GVLRALEEE-GIEIDIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred HHHHHHHHC-CCCeeEEEEeCHHHHHHHHHHcCC
Confidence 345555443 5 5567999999999999998874
No 314
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=23.76 E-value=63 Score=26.88 Aligned_cols=16 Identities=25% Similarity=0.183 Sum_probs=13.4
Q ss_pred HHHHhCCCcEEeecCC
Q 041488 108 FLLADNGYDVWLANTR 123 (402)
Q Consensus 108 ~~l~~~g~~v~~~D~r 123 (402)
..|+++|+.|+++|.-
T Consensus 50 ~~LA~~G~~V~gvD~S 65 (213)
T TIGR03840 50 AWLAEQGHRVLGVELS 65 (213)
T ss_pred HHHHhCCCeEEEEeCC
Confidence 3678999999999964
No 315
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=23.72 E-value=49 Score=29.04 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=21.7
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCC
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNG 114 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g 114 (402)
..+|-+|=+||+++++.+|.. +-+++.+-..|
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va----~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVA----EIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCchhHHH----HHHHHHHHhcc
Confidence 457888889999999987643 34444443333
No 316
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=23.54 E-value=2.1e+02 Score=25.74 Aligned_cols=82 Identities=18% Similarity=0.297 Sum_probs=50.5
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCc---EEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYD---VWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPA 156 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~---v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 156 (402)
.+.||++--|.. +-..| ...+..+.+.|.. ++..- - .|.-+ .| .++. ++ .
T Consensus 132 ~gkPvilStGma-tl~Ei------~~Av~~i~~~G~~~~~i~llh-C---~s~YP---~~---------~~~~---nL-~ 184 (329)
T TIGR03569 132 FGKPVILSTGMA-TLEEI------EAAVGVLRDAGTPDSNITLLH-C---TTEYP---AP---------FEDV---NL-N 184 (329)
T ss_pred cCCcEEEECCCC-CHHHH------HHHHHHHHHcCCCcCcEEEEE-E---CCCCC---CC---------cccC---CH-H
Confidence 577899999994 56666 5677778777764 43332 1 12111 01 1111 22 3
Q ss_pred HHHHHHHHhCCcceEEecChhHHHHHHHhcCC
Q 041488 157 TLQHVHDQTGQKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 157 ~v~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+..+++.++-++.+-+||.|-.++..+.+..
T Consensus 185 ~I~~Lk~~f~~pVG~SdHt~G~~~~~aAvalG 216 (329)
T TIGR03569 185 AMDTLKEAFDLPVGYSDHTLGIEAPIAAVALG 216 (329)
T ss_pred HHHHHHHHhCCCEEECCCCccHHHHHHHHHcC
Confidence 46677777777888899999977776665553
No 317
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=23.54 E-value=1.3e+02 Score=23.81 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=23.9
Q ss_pred HHHHHHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 156 ATLQHVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 156 ~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
.+++.+.++ + ..-.++|-|.|+.++..++...
T Consensus 17 Gvl~~L~~~-~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 17 GVLKALEEA-GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHc-CCCeeEEEEECHHHHHHHHHHcCC
Confidence 445566543 4 4557999999999999998764
No 318
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=23.41 E-value=59 Score=22.16 Aligned_cols=18 Identities=39% Similarity=0.429 Sum_probs=15.5
Q ss_pred CCHHHHHHhCCCcEEeec
Q 041488 104 QSLAFLLADNGYDVWLAN 121 (402)
Q Consensus 104 ~~~~~~l~~~g~~v~~~D 121 (402)
..++..|++.|++|+++|
T Consensus 17 ~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 17 ANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHCCCeEEEEC
Confidence 567888888899999999
No 319
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.36 E-value=1e+02 Score=22.73 Aligned_cols=30 Identities=20% Similarity=0.221 Sum_probs=24.5
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHH
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIAL 182 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~ 182 (402)
+..+.+++....++ +.++++|||--|++..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 56678888889999 8999999987776554
No 320
>COG0400 Predicted esterase [General function prediction only]
Probab=23.13 E-value=1.7e+02 Score=24.16 Aligned_cols=45 Identities=29% Similarity=0.330 Sum_probs=31.7
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC-CCc
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR-GTK 126 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r-G~G 126 (402)
....+|+++||.-+-.---.. ...+...|.+.|.+|...+.. ||.
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~---~~~l~~~l~~~g~~v~~~~~~~GH~ 189 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLAL---AEALAEYLTASGADVEVRWHEGGHE 189 (207)
T ss_pred cCCCeEEEeccCcCCccCHHH---HHHHHHHHHHcCCCEEEEEecCCCc
Confidence 457899999997765321100 146778888999999999986 544
No 321
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=23.06 E-value=1.8e+02 Score=26.96 Aligned_cols=45 Identities=7% Similarity=0.001 Sum_probs=29.9
Q ss_pred CCcEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhC-CcceEEe
Q 041488 114 GYDVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTG-QKPHYVG 173 (402)
Q Consensus 114 g~~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~-~~~~lvG 173 (402)
-|.||.+|.|.++.|.... + -+..|+..++....+.+. +-+.++-
T Consensus 290 ~fDlIilDPPsF~r~k~~~-------------~--~~~rdy~~l~~~~~~iL~pgG~l~~~ 335 (393)
T COG1092 290 KFDLIILDPPSFARSKKQE-------------F--SAQRDYKDLNDLALRLLAPGGTLVTS 335 (393)
T ss_pred cccEEEECCcccccCcccc-------------h--hHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 4999999999999987521 1 113467777777777666 3444443
No 322
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=22.70 E-value=67 Score=30.14 Aligned_cols=38 Identities=13% Similarity=0.161 Sum_probs=22.8
Q ss_pred ccEEEEEeCCCccCChhHHHHHHHHccCCCCCceEEEECCCCCccc
Q 041488 335 LPLFLSYGGADALSDVNDVKLLLESLNDHEGDKLVVQYRQDYAHAD 380 (402)
Q Consensus 335 ~Pvlii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 380 (402)
.-|++.+|+.|++-... ..+.... ....++||+++|..
T Consensus 377 tnviFtNG~~DPW~~lg----v~~~~~~----~~~~~~I~g~~Hc~ 414 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG----VTSDSSD----SVPAIVIPGGAHCS 414 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSS----SEEEEEETT--TTG
T ss_pred CeEEeeCCCCCCccccc----CCCCCCC----CcccEEECCCeeec
Confidence 47999999999986654 2222332 35667899999984
No 323
>PRK11586 napB nitrate reductase cytochrome C550 subunit; Provisional
Probab=22.63 E-value=99 Score=23.67 Aligned_cols=27 Identities=22% Similarity=0.345 Sum_probs=16.9
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhhccc
Q 041488 1 MKTKKLKTANGLMSIIVSVLFCGSAVG 27 (402)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (402)
||++.++.....+..++.+++++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ 27 (149)
T PRK11586 1 MKSHDLKKALCQWTAMLALVVSGAVWA 27 (149)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhHhh
Confidence 788777777766665555555444433
No 324
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=22.53 E-value=52 Score=28.41 Aligned_cols=41 Identities=7% Similarity=0.007 Sum_probs=29.7
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCCC
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTRG 124 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~rG 124 (402)
..++||++.|+-+++..-.. +.+...|..+|++|.++..|-
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I----~~l~~~lDPRg~~V~s~~~Pt 94 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTI----RHVMSGVNPQGCQVTSFKAPS 94 (264)
T ss_pred CCcEEEEEECCCCCCchHHH----HHHHHhcCCCeeEEEeCCCCC
Confidence 36899999999887764333 456666767889998885443
No 325
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=22.48 E-value=1.7e+02 Score=21.59 Aligned_cols=15 Identities=20% Similarity=0.246 Sum_probs=11.5
Q ss_pred HHHHHHhCCCcEEee
Q 041488 106 LAFLLADNGYDVWLA 120 (402)
Q Consensus 106 ~~~~l~~~g~~v~~~ 120 (402)
....|.+.|++|+.+
T Consensus 99 ~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 99 VNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHCcCEEEEE
Confidence 345687899999875
No 326
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=22.31 E-value=1.3e+02 Score=25.97 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=24.5
Q ss_pred HHHHHHHHHhCC-cceEEecChhHHHHHHHhcCCC
Q 041488 156 ATLQHVHDQTGQ-KPHYVGHSLGTLIALASFSKDQ 189 (402)
Q Consensus 156 ~~v~~l~~~~~~-~~~lvGhS~Gg~~a~~~a~~~p 189 (402)
.+++.+.+..-. .=.++|.|.|+.++..+++..+
T Consensus 15 Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 15 GVLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCc
Confidence 445666554224 4489999999999999988743
No 327
>CHL00175 minD septum-site determining protein; Validated
Probab=21.68 E-value=81 Score=27.42 Aligned_cols=39 Identities=21% Similarity=0.138 Sum_probs=28.5
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR 123 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r 123 (402)
..+|.++.|-|+.+.+... -+++..|++.|++|+++|.-
T Consensus 15 ~~vi~v~s~KGGvGKTt~a----~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTT----ANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcCCCCCcHHHHH----HHHHHHHHhCCCeEEEEeCC
Confidence 4567777766666555433 57888899999999999874
No 328
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=21.49 E-value=1.5e+02 Score=29.53 Aligned_cols=48 Identities=29% Similarity=0.288 Sum_probs=30.8
Q ss_pred CCCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC--CCcccC
Q 041488 79 GNRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR--GTKYSR 129 (402)
Q Consensus 79 ~~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r--G~G~S~ 129 (402)
+-+.|+|++||..+..-.. .+ ...+...|...|..|-..=++ ||+.+.
T Consensus 549 ~i~~P~LliHG~~D~~v~~-~q--~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPI-EQ--AEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred ccCCCEEEEeecCCccCCh-HH--HHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 4578999999987754322 11 135677787788776555555 566554
No 329
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=21.24 E-value=1.4e+02 Score=22.47 Aligned_cols=14 Identities=21% Similarity=0.249 Sum_probs=10.1
Q ss_pred HHHHHhCCCcEEee
Q 041488 107 AFLLADNGYDVWLA 120 (402)
Q Consensus 107 ~~~l~~~g~~v~~~ 120 (402)
...|.+.|++|++.
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 55677889987654
No 330
>PHA02114 hypothetical protein
Probab=20.92 E-value=90 Score=21.90 Aligned_cols=35 Identities=17% Similarity=0.318 Sum_probs=27.8
Q ss_pred CCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeec
Q 041488 81 RLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLAN 121 (402)
Q Consensus 81 ~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D 121 (402)
-.+||+=--+..+..-| -.+...|.+.||+|++-.
T Consensus 82 ~gtivldvn~amsr~pw------i~v~s~le~~g~~vvatq 116 (127)
T PHA02114 82 YGTIVLDVNYAMSRAPW------IKVISRLEEAGFNVVATQ 116 (127)
T ss_pred cCeEEEEehhhhccCcH------HHHHHHHHhcCceeeehh
Confidence 34788877788888888 567788989999999854
No 331
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=20.81 E-value=1.1e+02 Score=29.12 Aligned_cols=63 Identities=14% Similarity=0.078 Sum_probs=40.9
Q ss_pred CccEEEEEeCCCccCChhHHHHHHHHccCC--CCCceEEEECCCCCccceecccCcchhccHHHHHHHh
Q 041488 334 DLPLFLSYGGADALSDVNDVKLLLESLNDH--EGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 400 (402)
Q Consensus 334 ~~Pvlii~G~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~ 400 (402)
+.+++..+|=.|..+|+-......+.++.- ......+.++ ++||+ +..+.|+...+.+..|+.
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y-~aGHM---vp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIY-EAGHM---VPYDRPESSLEMVNLWIN 489 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEe-cCcce---eecCChHHHHHHHHHHHh
Confidence 456777777777777776655555555441 1112334445 59999 578999988888888764
No 332
>TIGR03586 PseI pseudaminic acid synthase.
Probab=20.75 E-value=3.6e+02 Score=24.29 Aligned_cols=81 Identities=19% Similarity=0.260 Sum_probs=51.0
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCC-cEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHH
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGY-DVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATL 158 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~-~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v 158 (402)
.+.||++--|.. +-..| ...+.++.+.|. .|+... +-|.-+. + .++. |+ ..+
T Consensus 133 ~gkPvilstG~~-t~~Ei------~~Av~~i~~~g~~~i~Llh----C~s~YP~---~---------~~~~---nL-~~i 185 (327)
T TIGR03586 133 TGKPIIMSTGIA-TLEEI------QEAVEACREAGCKDLVLLK----CTSSYPA---P---------LEDA---NL-RTI 185 (327)
T ss_pred cCCcEEEECCCC-CHHHH------HHHHHHHHHCCCCcEEEEe----cCCCCCC---C---------cccC---CH-HHH
Confidence 577999999994 66666 567778877787 455543 2222111 1 1111 22 246
Q ss_pred HHHHHHhCCcceEEecChhHHHHHHHhcC
Q 041488 159 QHVHDQTGQKPHYVGHSLGTLIALASFSK 187 (402)
Q Consensus 159 ~~l~~~~~~~~~lvGhS~Gg~~a~~~a~~ 187 (402)
..+++.++-+|.+..|+.|-.++..+.+.
T Consensus 186 ~~lk~~f~~pVG~SDHt~G~~~~~aAva~ 214 (327)
T TIGR03586 186 PDLAERFNVPVGLSDHTLGILAPVAAVAL 214 (327)
T ss_pred HHHHHHhCCCEEeeCCCCchHHHHHHHHc
Confidence 67777777788789999997666665554
No 333
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=20.74 E-value=2.1e+02 Score=22.32 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=36.1
Q ss_pred HHHHHHhCCC-cEEeecCCCCcccCCCCCCCCCCcccccccHHHHhhcchHHHHHHHHHHhCCcceEEecC-hhHHHHHH
Q 041488 106 LAFLLADNGY-DVWLANTRGTKYSRGHVSLSPDDSAFWDWTWDELVAYDLPATLQHVHDQTGQKPHYVGHS-LGTLIALA 183 (402)
Q Consensus 106 ~~~~l~~~g~-~v~~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~l~~~~~~~~~lvGhS-~Gg~~a~~ 183 (402)
+...+...|. +|+..+.+...... .+.+...+..+.++.+..++++|+| .|.-++..
T Consensus 50 l~~~l~~~G~d~v~~~~~~~~~~~~---------------------~~~~a~~l~~~~~~~~~~lVl~~~t~~g~~la~~ 108 (164)
T PF01012_consen 50 LRKALAKYGADKVYHIDDPALAEYD---------------------PEAYADALAELIKEEGPDLVLFGSTSFGRDLAPR 108 (164)
T ss_dssp HHHHHHSTTESEEEEEE-GGGTTC----------------------HHHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHH
T ss_pred HhhhhhhcCCcEEEEecCccccccC---------------------HHHHHHHHHHHHHhcCCCEEEEcCcCCCCcHHHH
Confidence 3344655786 68888876644221 1234556777777766678899987 55555555
Q ss_pred HhcC
Q 041488 184 SFSK 187 (402)
Q Consensus 184 ~a~~ 187 (402)
++.+
T Consensus 109 lA~~ 112 (164)
T PF01012_consen 109 LAAR 112 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 334
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=20.55 E-value=1.3e+02 Score=26.62 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=24.0
Q ss_pred HHHHHHHHhC-CcceEEecChhHHHHHHHhcCC
Q 041488 157 TLQHVHDQTG-QKPHYVGHSLGTLIALASFSKD 188 (402)
Q Consensus 157 ~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 188 (402)
+++.|. +.+ ..-.+.|-|+|+.++..+|+..
T Consensus 29 Vl~aL~-e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALE-EAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHH-HcCCCccEEEecCHHHHHHHHHHcCC
Confidence 345444 446 7788999999999999999864
No 335
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=20.21 E-value=2.6e+02 Score=19.20 Aligned_cols=40 Identities=13% Similarity=0.076 Sum_probs=26.0
Q ss_pred CCCcEEEecCccccccccccCCCCCCHHHHHHhCCCcEEeecCC
Q 041488 80 NRLPVFLQHGLLMDAVTWLLLPPEQSLAFLLADNGYDVWLANTR 123 (402)
Q Consensus 80 ~~~~vll~HG~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~D~r 123 (402)
..++|||..|..+...+=+. ..+.+.|.+.|......|..
T Consensus 7 ~~~vvvf~k~~~~~~~Cp~C----~~ak~~L~~~~i~y~~idv~ 46 (90)
T cd03028 7 ENPVVLFMKGTPEEPRCGFS----RKVVQILNQLGVDFGTFDIL 46 (90)
T ss_pred cCCEEEEEcCCCCCCCCcHH----HHHHHHHHHcCCCeEEEEcC
Confidence 36789999887655543222 35666777788766666654
No 336
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.04 E-value=1.3e+02 Score=24.22 Aligned_cols=32 Identities=19% Similarity=-0.001 Sum_probs=25.7
Q ss_pred chHHHHHHHHHHhC-CcceEEecChhHHHHHHH
Q 041488 153 DLPATLQHVHDQTG-QKPHYVGHSLGTLIALAS 184 (402)
Q Consensus 153 d~~~~v~~l~~~~~-~~~~lvGhS~Gg~~a~~~ 184 (402)
+..+.++|....++ +.|+++|||-=|++...+
T Consensus 66 ~~~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 66 NCLSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred chhhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 45678999999999 899999999877665544
Done!