BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041491
(467 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 128/241 (53%), Gaps = 13/241 (5%)
Query: 184 RYRKGNTELSNIEVNMSPQ---AMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFL 240
R +K ++ P+ +RFS +EL +A+D+FS K+++G G FG VYKGR
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 241 DGMEVAIKVFHLQ-FDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANG 299
DG VA+K + G F E E++ HRNL+++ C LV YMANG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 300 SLEKCLY---SSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV 356
S+ CL S LD +R I + A L YLH ++H D+K +N+LLD++
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 357 AHLSDFGIAKLLNGKE-SMRTQTLATI-----EYGREGQVSPKSDVYGYGITLIETFTKK 410
A + DFG+AKL++ K+ + TI EY G+ S K+DV+GYG+ L+E T +
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 411 K 411
+
Sbjct: 241 R 241
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 118/216 (54%), Gaps = 10/216 (4%)
Query: 206 RRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQ-FDGALKSFDAE 264
+RFS +EL +A+D+F K+++G G FG VYKGR DG VA+K + G F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLY---SSNGILDIFQRLSIM 321
E++ HRNL+++ C LV YMANGS+ CL S LD +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 322 IDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT 381
+ A L YLH ++H D+K +N+LLD++ A + DFG+AKL++ K+ +
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 382 I------EYGREGQVSPKSDVYGYGITLIETFTKKK 411
EY G+ S K+DV+GYG+ L+E T ++
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 120/225 (53%), Gaps = 18/225 (8%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN 275
AT++F K LIG G FG VYKG DG +VA+K + ++ F+ E E L RH +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSN---GILDIFQRLSIMIDVALALEYLH 332
LV +I C N L+ +YM NG+L++ LY S+ + QRL I I A L YLH
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ-------TLATI--E 383
+ ++H D+K N+LLD++ V ++DFGI+K G E +T TL I E
Sbjct: 157 ---TRAIIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYIDPE 211
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM-NLKNWV 427
Y +G+++ KSDVY +G+ L E + + EM NL W
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 120/225 (53%), Gaps = 18/225 (8%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN 275
AT++F K LIG G FG VYKG DG +VA+K + ++ F+ E E L RH +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSN---GILDIFQRLSIMIDVALALEYLH 332
LV +I C N L+ +YM NG+L++ LY S+ + QRL I I A L YLH
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ-------TLATI--E 383
+ ++H D+K N+LLD++ V ++DFGI+K G E +T TL I E
Sbjct: 157 ---TRAIIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGYIDPE 211
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM-NLKNWV 427
Y +G+++ KSDVY +G+ L E + + EM NL W
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 22/222 (9%)
Query: 205 WRRFSYQELLLATDHFSEKSL------IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL 258
+ FS+ EL T++F E+ + +G G FG VYKG +++ VA+K D
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 70
Query: 259 ----KSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI--L 312
+ FD E +V+ +H NLV+++ S+G+ LV YM NGSL L +G L
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 313 DIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--G 370
R I A + +LH N +H DIK +N+LLD+ A +SDFG+A+
Sbjct: 131 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 371 KESMRTQTLATIEY----GREGQVSPKSDVYGYGITLIETFT 408
+ M ++ + T Y G+++PKSD+Y +G+ L+E T
Sbjct: 188 QTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 22/222 (9%)
Query: 205 WRRFSYQELLLATDHFSEKSL------IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL 258
+ FS+ EL T++F E+ + +G G FG VYKG +++ VA+K D
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 70
Query: 259 ----KSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI--L 312
+ FD E +V+ +H NLV+++ S+G+ LV YM NGSL L +G L
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 313 DIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--G 370
R I A + +LH N +H DIK +N+LLD+ A +SDFG+A+
Sbjct: 131 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 371 KESMRTQTLATIEY----GREGQVSPKSDVYGYGITLIETFT 408
+ M + + T Y G+++PKSD+Y +G+ L+E T
Sbjct: 188 QTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 22/222 (9%)
Query: 205 WRRFSYQELLLATDHFSEKSL------IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL 258
+ FS+ EL T++F E+ + +G G FG VYKG +++ VA+K D
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 64
Query: 259 ----KSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI--L 312
+ FD E +V+ +H NLV+++ S+G+ LV YM NGSL L +G L
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 313 DIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--G 370
R I A + +LH N +H DIK +N+LLD+ A +SDFG+A+
Sbjct: 125 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 371 KESMRTQTLATIEY----GREGQVSPKSDVYGYGITLIETFT 408
+ M + + T Y G+++PKSD+Y +G+ L+E T
Sbjct: 182 QXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 108/202 (53%), Gaps = 17/202 (8%)
Query: 223 KSLIGIGSFGTVYKGRFLDGMEVAIKV-----FHLQFDGALKSFDAECEVLKSVRHRNLV 277
K IG GSFGTV++ + G +VA+K+ FH + + F E ++K +RH N+V
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAE---RVNEFLREVAIMKRLRHPNIV 97
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGY 335
+ + + ++V EY++ GSL + L+ S LD +RLS+ DVA + YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NR 156
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL-----LNGKESMRTQTLATIEYGREGQV 390
+ P+VH D+K N+L+D + DFG+++L L K + T E R+
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 391 SPKSDVYGYGITLIETFTKKKP 412
+ KSDVY +G+ L E T ++P
Sbjct: 217 NEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 109/202 (53%), Gaps = 17/202 (8%)
Query: 223 KSLIGIGSFGTVYKGRFLDGMEVAIKV-----FHLQFDGALKSFDAECEVLKSVRHRNLV 277
K IG GSFGTV++ + G +VA+K+ FH + + F E ++K +RH N+V
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAE---RVNEFLREVAIMKRLRHPNIV 97
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGY 335
+ + + ++V EY++ GSL + L+ S LD +RLS+ DVA + YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NR 156
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL-----LNGKESMRTQTLATIEYGREGQV 390
+ P+VH ++K N+L+D + DFG+++L L+ K + T E R+
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 391 SPKSDVYGYGITLIETFTKKKP 412
+ KSDVY +G+ L E T ++P
Sbjct: 217 NEKSDVYSFGVILWELATLQQP 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 205 WRRFSYQELLLATDHFSEKSL------IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL 258
+ FS+ EL T++F E+ + G G FG VYKG +++ VA+K D
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 61
Query: 259 ----KSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI--L 312
+ FD E +V +H NLV+++ S+G+ LV Y NGSL L +G L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 313 DIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--G 370
R I A + +LH N +H DIK +N+LLD+ A +SDFG+A+
Sbjct: 122 SWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 371 KESMRTQTLATIEY----GREGQVSPKSDVYGYGITLIETFT 408
+ ++ + T Y G+++PKSD+Y +G+ L+E T
Sbjct: 179 QXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRHRNLVKIISS 282
IG GSFGTVYKG++ +VA+K+ + D + F A E VL+ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKV-VDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
+ N A+V ++ SL K L+ +FQ + I A ++YLH + ++H
Sbjct: 101 MTKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKL---LNGKESMRTQTLATIEYGRE-------GQVSP 392
D+K +N+ L + + + DFG+A + +G + + T + + E S
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 393 KSDVYGYGITLIETFTKKKPTCEI 416
+SDVY YGI L E T + P I
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHI 240
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 99/194 (51%), Gaps = 24/194 (12%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK---IISS 282
IG G FG V G + G +VA+K ++ D ++F AE V+ +RH NLV+ +I
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 283 CSNGNFEALVLEYMANGSLEKCLYS-SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVH 341
G + +V EYMA GSL L S +L L +DV A+EYL N VH
Sbjct: 71 EKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 125
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI-------EYGREGQVSPKS 394
D+ NVL+ +D VA +SDFG+ KE+ TQ + E RE + S KS
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 395 DVYGYGITLIETFT 408
DV+ +GI L E ++
Sbjct: 181 DVWSFGILLWEIYS 194
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 98/194 (50%), Gaps = 24/194 (12%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK---IISS 282
IG G FG V G + G +VA+K ++ D ++F AE V+ +RH NLV+ +I
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 283 CSNGNFEALVLEYMANGSLEKCLYS-SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVH 341
G + +V EYMA GSL L S +L L +DV A+EYL N VH
Sbjct: 77 EKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 131
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI-------EYGREGQVSPKS 394
D+ NVL+ +D VA +SDFG+ KE+ TQ + E RE S KS
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 395 DVYGYGITLIETFT 408
DV+ +GI L E ++
Sbjct: 187 DVWSFGILLWEIYS 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 99/194 (51%), Gaps = 24/194 (12%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK---IISS 282
IG G FG V G + G +VA+K ++ D ++F AE V+ +RH NLV+ +I
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 283 CSNGNFEALVLEYMANGSLEKCLYS-SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVH 341
G + +V EYMA GSL L S +L L +DV A+EYL N VH
Sbjct: 86 EKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 140
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI-------EYGREGQVSPKS 394
D+ NVL+ +D VA +SDFG+ KE+ TQ + E RE + S KS
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 395 DVYGYGITLIETFT 408
DV+ +GI L E ++
Sbjct: 196 DVWSFGILLWEIYS 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 99/194 (51%), Gaps = 24/194 (12%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK---IISS 282
IG G FG V G + G +VA+K ++ D ++F AE V+ +RH NLV+ +I
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 283 CSNGNFEALVLEYMANGSLEKCLYS-SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVH 341
G + +V EYMA GSL L S +L L +DV A+EYL N VH
Sbjct: 258 EKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVH 312
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI-------EYGREGQVSPKS 394
D+ NVL+ +D VA +SDFG+ KE+ TQ + E RE + S KS
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 395 DVYGYGITLIETFT 408
DV+ +GI L E ++
Sbjct: 368 DVWSFGILLWEIYS 381
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
IG G FG V+ G +L+ +VAIK +GA+ + F E EV+ + H LV++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
LV E+M +G L L + G+ L + +DV + YL V+H D
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRD 128
Query: 344 IKPSNVLLDDDMVAHLSDFGIAK-LLNGKESMRTQTLATIEYGRE-----GQVSPKSDVY 397
+ N L+ ++ V +SDFG+ + +L+ + + T T +++ + S KSDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 398 GYGITLIETFTKKK 411
+G+ + E F++ K
Sbjct: 189 SFGVLMWEVFSEGK 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
IG G FG V+ G +L+ +VAIK +GA+ + F E EV+ + H LV++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
LV E+M +G L L + G+ L + +DV + YL V+H D
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 131
Query: 344 IKPSNVLLDDDMVAHLSDFGIAK-LLNGKESMRTQTLATIEYGRE-----GQVSPKSDVY 397
+ N L+ ++ V +SDFG+ + +L+ + + T T +++ + S KSDV+
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 398 GYGITLIETFTKKK 411
+G+ + E F++ K
Sbjct: 192 SFGVLMWEVFSEGK 205
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
IG G FG V+ G +L+ +VAIK +GA+ + F E EV+ + H LV++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
LV E+M +G L L + G+ L + +DV + YL V+H D
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 126
Query: 344 IKPSNVLLDDDMVAHLSDFGIAK-LLNGKESMRTQTLATIEYGRE-----GQVSPKSDVY 397
+ N L+ ++ V +SDFG+ + +L+ + + T T +++ + S KSDV+
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 398 GYGITLIETFTKKK 411
+G+ + E F++ K
Sbjct: 187 SFGVLMWEVFSEGK 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
IG G FG V+ G +L+ +VAIK +GA+ + F E EV+ + H LV++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
LV E+M +G L L + G+ L + +DV + YL V+H D
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 128
Query: 344 IKPSNVLLDDDMVAHLSDFGIAK-LLNGKESMRTQTLATIEYGRE-----GQVSPKSDVY 397
+ N L+ ++ V +SDFG+ + +L+ + + T T +++ + S KSDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 398 GYGITLIETFTKKK 411
+G+ + E F++ K
Sbjct: 189 SFGVLMWEVFSEGK 202
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 26/220 (11%)
Query: 221 SEKSLIGIGSFGTVYKGRFLDG-----MEVAIKVFHLQFDGALK-SFDAECEVLKSVRHR 274
+ + +IG G FG VYKG + VAIK + + F E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HF 333
N++++ S ++ EYM NG+L+K L +G + Q + ++ +A ++YL +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATI 382
Y VH D+ N+L++ ++V +SDFG++++L GK +R I
Sbjct: 167 NY----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 383 EYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEM 421
Y + + SDV+ +GI + E T ++P E+ E+
Sbjct: 223 SYRK---FTSASDVWSFGIVMWEVMTYGERPYWELSNHEV 259
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
IG G+ GTVY G EVAI+ +LQ + E V++ ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
G+ +V+EY+A GSL + + +D Q ++ + ALE+LH SN V+H DI
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS-----PKSDVYGY 399
K N+LL D L+DFG + ++S R++ + T + V+ PK D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 400 GITLIETFTKKKP 412
GI IE + P
Sbjct: 203 GIMAIEMIEGEPP 215
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
IG G FG V+ G +L+ +VAIK +GA+ + F E EV+ + H LV++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
LV E+M +G L L + G+ L + +DV + YL V+H D
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 129
Query: 344 IKPSNVLLDDDMVAHLSDFGIAK-LLNGKESMRTQTLATIEYGRE-----GQVSPKSDVY 397
+ N L+ ++ V +SDFG+ + +L+ + + T T +++ + S KSDV+
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 398 GYGITLIETFTKKK 411
+G+ + E F++ K
Sbjct: 190 SFGVLMWEVFSEGK 203
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 18/196 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYL-HFGYSNPVVH 341
S +V EYM+ GSL L G L + Q + + +A + Y+ Y VH
Sbjct: 73 SEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----VH 127
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSD 395
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSD
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 396 VYGYGITLIETFTKKK 411
V+ +GI L E TK +
Sbjct: 188 VWSFGILLTELTTKGR 203
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHC 342
S +V+EYM+ GSL L G + + RL ++D+A + + + VH
Sbjct: 83 SEEPI-YIVIEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
IG G+ GTVY G EVAI+ +LQ + E V++ ++ N+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
G+ +V+EY+A GSL + + +D Q ++ + ALE+LH SN V+H DI
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 143
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS-----PKSDVYGY 399
K N+LL D L+DFG + ++S R+ + T + V+ PK D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 400 GITLIETFTKKKP 412
GI IE + P
Sbjct: 204 GIMAIEMIEGEPP 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
IG G+ GTVY G EVAI+ +LQ + E V++ ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
G+ +V+EY+A GSL + + +D Q ++ + ALE+LH SN V+H DI
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS-----PKSDVYGY 399
K N+LL D L+DFG + ++S R+ + T + V+ PK D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 400 GITLIETFTKKKP 412
GI IE + P
Sbjct: 203 GIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
IG G+ GTVY G EVAI+ +LQ + E V++ ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
G+ +V+EY+A GSL + + +D Q ++ + ALE+LH SN V+H DI
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS-----PKSDVYGY 399
K N+LL D L+DFG + ++S R+ + T + V+ PK D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 400 GITLIETFTKKKP 412
GI IE + P
Sbjct: 203 GIMAIEMIEGEPP 215
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHC 342
S +V+EYM+ GSL L G + + RL ++D+A + + + VH
Sbjct: 83 SEEPI-YIVIEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 225 LIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKI 279
++G G FG V GR + VAIK + + + + F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYSNP 338
+ +V EYM NGSL+ L + + Q + ++ +A ++YL GY
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 339 VVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYGRE 387
VH D+ N+L++ ++V +SDFG+A++L GK +R + I Y +
Sbjct: 169 -VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 388 GQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ SDV+ YGI L E + ++P E+
Sbjct: 227 --FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHC 342
S +V EYM+ GSL L G + + RL ++D+A + + + VH
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 24/203 (11%)
Query: 223 KSLIGIGSFGTVYKGRF-LDG---MEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG G FG V GR L G + VAIK + + + + F E ++ H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYS 336
+ + G +V+E+M NG+L+ L +G + Q + ++ +A + YL GY
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY- 166
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYG 385
VH D+ N+L++ ++V +SDFG+++++ GK +R I+Y
Sbjct: 167 ---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 386 REGQVSPKSDVYGYGITLIETFT 408
+ + SDV+ YGI + E +
Sbjct: 224 K---FTSASDVWSYGIVMWEVMS 243
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
S +V EYM+ GSL L G L + Q + + +A + Y+ VH
Sbjct: 76 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 131
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 192 WSFGILLTELTTKGR 206
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
S +V EYM+ GSL L G L + Q + + +A + Y+ VH
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 223 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISS 282
+ ++G G+FG V K ++ +VAIK ++ + K+F E L V H N+VK+ +
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGI--LDIFQRLSIMIDVALALEYLHFGYSNPVV 340
C N LV+EY GSL L+ + + +S + + + YLH ++
Sbjct: 71 CLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 341 HCDIKPSNVLL-DDDMVAHLSDFGIA-----KLLNGKESMRTQTLATIEYGREGQVSPKS 394
H D+KP N+LL V + DFG A + N K S E S K
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE---GSNYSEKC 185
Query: 395 DVYGYGITLIETFTKKKPTCEI 416
DV+ +GI L E T++KP EI
Sbjct: 186 DVFSWGIILWEVITRRKPFDEI 207
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHC 342
S +V EYM+ GSL L G + + RL ++D+A + + + VH
Sbjct: 72 SEEPI-YIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 127
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 188 WSFGILLTELTTKGR 202
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
S +V EYM+ GSL L G L + Q + + +A + Y+ VH
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 223 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISS 282
+ ++G G+FG V K ++ +VAIK ++ + K+F E L V H N+VK+ +
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGI--LDIFQRLSIMIDVALALEYLHFGYSNPVV 340
C N LV+EY GSL L+ + + +S + + + YLH ++
Sbjct: 70 CLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 341 HCDIKPSNVLL-DDDMVAHLSDFGIA-----KLLNGKESMRTQTLATIEYGREGQVSPKS 394
H D+KP N+LL V + DFG A + N K S E S K
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE---GSNYSEKC 184
Query: 395 DVYGYGITLIETFTKKKPTCEI 416
DV+ +GI L E T++KP EI
Sbjct: 185 DVFSWGIILWEVITRRKPFDEI 206
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG GSFGTVYKG++ +VA+K+ ++ L++F E VL+ RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ A+V ++ SL L++S ++ + + I A ++YLH + ++H D
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL------------LNGKESMRTQTLATIEYGREGQVS 391
+K +N+ L +D + DFG+A + L+G S+ I S
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG--SILWMAPEVIRMQDSNPYS 191
Query: 392 PKSDVYGYGITLIETFTKKKPTCEI 416
+SDVY +GI L E T + P I
Sbjct: 192 FQSDVYAFGIVLYELMTGQLPYSNI 216
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSC 283
IG G FG V+ G +L+ +VAIK +G++ F E EV+ + H LV++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
LV E+M +G L L + G+ L + +DV + YL V+H D
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRD 148
Query: 344 IKPSNVLLDDDMVAHLSDFGIAK-LLNGKESMRTQTLATIEYGRE-----GQVSPKSDVY 397
+ N L+ ++ V +SDFG+ + +L+ + + T T +++ + S KSDV+
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 398 GYGITLIETFTKKK 411
+G+ + E F++ K
Sbjct: 209 SFGVLMWEVFSEGK 222
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSC 283
+G G FG V G++ +VAIK+ +G++ F E +V+ ++ H LV++ C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ ++ EYMANG L L Q L + DV A+EYL S +H D
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 344 IKPSNVLLDDDMVAHLSDFGIAK-LLNGKESMRTQTLATIEYGRE-----GQVSPKSDVY 397
+ N L++D V +SDFG+++ +L+ +E+ + + + + S KSD++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 398 GYGITLIETFTKKKPTCEIF 417
+G+ + E ++ K E F
Sbjct: 206 AFGVLMWEIYSLGKMPYERF 225
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 206 RRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDA 263
RR S + + + IG GSFGTVYKG++ +VA+K+ ++ L++F
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 80
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
E VL+ RH N++ + + A+V ++ SL L+ ++ + + I
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL------------LNGK 371
A ++YLH + ++H D+K +N+ L +D+ + DFG+A + L+G
Sbjct: 140 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG- 195
Query: 372 ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416
S+ I + S +SDVY +GI L E T + P I
Sbjct: 196 -SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 239
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHC 342
S +V EYM+ GSL L G + + RL ++D+A + + + VH
Sbjct: 74 SEEPI-YIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 190 WSFGILLTELTTKGR 204
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 206 RRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDA 263
RR S + + + IG GSFGTVYKG++ +VA+K+ ++ L++F
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 81
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
E VL+ RH N++ + + A+V ++ SL L+ ++ + + I
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL------------LNGK 371
A ++YLH + ++H D+K +N+ L +D+ + DFG+A + L+G
Sbjct: 141 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG- 196
Query: 372 ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416
S+ I + S +SDVY +GI L E T + P I
Sbjct: 197 -SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLK 269
L + S ++G G FG V GR + VAIK + + + + F E ++
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
H N++++ + +V EYM NGSL+ L + + Q + ++ +A ++
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 149
Query: 330 YL-HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQ 377
YL GY VH D+ N+L++ ++V +SDFG++++L GK +R
Sbjct: 150 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ I Y + + SDV+ YGI L E + ++P E+
Sbjct: 206 SPEAIAYRK---FTSASDVWSYGIVLWEVMSYGERPYWEM 242
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHC 342
S +V EYM+ GSL L G + + RL ++D+A + + + VH
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHC 342
S +V EYM+ GSL L G + + RL ++D+A + + + VH
Sbjct: 83 SEEPI-YIVCEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLK 269
L + S ++G G FG V GR + VAIK + + + + F E ++
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
H N++++ + +V EYM NGSL+ L + + Q + ++ +A ++
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 330 YL-HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQ 377
YL GY VH D+ N+L++ ++V +SDFG++++L GK +R
Sbjct: 133 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ I Y + + SDV+ YGI L E + ++P E+
Sbjct: 189 SPEAIAYRK---FTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 206 RRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDA 263
RR S + + + IG GSFGTVYKG++ +VA+K+ ++ L++F
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 73
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
E VL+ RH N++ + + A+V ++ SL L+ ++ + + I
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA------------KLLNGK 371
A ++YLH + ++H D+K +N+ L +D+ + DFG+A + L+G
Sbjct: 133 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG- 188
Query: 372 ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416
S+ I + S +SDVY +GI L E T + P I
Sbjct: 189 -SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 232
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG GSFGTVYKG++ +VA+K+ ++ L++F E VL+ RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ A+V ++ SL L+ ++ + + I A ++YLH + ++H D
Sbjct: 76 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 131
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL------------LNGKESMRTQTLATIEYGREGQVS 391
+K +N+ L +D+ + DFG+A + L+G S+ I + S
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG--SILWMAPEVIRMQDKNPYS 189
Query: 392 PKSDVYGYGITLIETFTKKKPTCEI 416
+SDVY +GI L E T + P I
Sbjct: 190 FQSDVYAFGIVLYELMTGQLPYSNI 214
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG GSFGTVYKG++ +VA+K+ ++ L++F E VL+ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ A+V ++ SL L++S ++ + + I A ++YLH + ++H D
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 344 IKPSNVLLDDDMVAHLSDFGIA------------KLLNGKESMRTQTLATIEYGREGQVS 391
+K +N+ L +D + DFG+A + L+G S+ I S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG--SILWMAPEVIRMQDSNPYS 203
Query: 392 PKSDVYGYGITLIETFTKKKPTCEI 416
+SDVY +GI L E T + P I
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSNI 228
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG GSFGTVYKG++ +VA+K+ ++ L++F E VL+ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ A+V ++ SL L+ ++ + + I A ++YLH + ++H D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL------------LNGKESMRTQTLATIEYGREGQVS 391
+K +N+ L +D+ + DFG+A + L+G S+ I + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG--SILWMAPEVIRMQDKNPYS 187
Query: 392 PKSDVYGYGITLIETFTKKKPTCEI 416
+SDVY +GI L E T + P I
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 206 RRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDA 263
RR S + + + IG GSFGTVYKG++ +VA+K+ ++ L++F
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 81
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
E VL+ RH N++ + + A+V ++ SL L+ ++ + + I
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA------------KLLNGK 371
A ++YLH + ++H D+K +N+ L +D+ + DFG+A + L+G
Sbjct: 141 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG- 196
Query: 372 ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416
S+ I + S +SDVY +GI L E T + P I
Sbjct: 197 -SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG GSFGTVYKG++ +VA+K+ ++ L++F E VL+ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ A+V ++ SL L+ ++ + + I A ++YLH + ++H D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL------------LNGKESMRTQTLATIEYGREGQVS 391
+K +N+ L +D+ + DFG+A + L+G S+ I + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG--SILWMAPEVIRMQDKNPYS 192
Query: 392 PKSDVYGYGITLIETFTKKKPTCEI 416
+SDVY +GI L E T + P I
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 18/196 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYL-HFGYSNPVVH 341
S +V EYM+ GSL L G L + Q + + +A + Y+ Y VH
Sbjct: 332 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY----VH 386
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSD 395
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSD
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 396 VYGYGITLIETFTKKK 411
V+ +GI L E TK +
Sbjct: 447 VWSFGILLTELTTKGR 462
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG GSFGTVYKG++ +VA+K+ ++ L++F E VL+ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ A+V ++ SL L+ ++ + + I A ++YLH + ++H D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL------------LNGKESMRTQTLATIEYGREGQVS 391
+K +N+ L +D+ + DFG+A + L+G S+ I + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG--SILWMAPEVIRMQDKNPYS 192
Query: 392 PKSDVYGYGITLIETFTKKKPTCEI 416
+SDVY +GI L E T + P I
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 225 LIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKI 279
++G G FG V GR + VAIK + + + + F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYSNP 338
+ +V EYM NGSL+ L + + Q + ++ +A ++YL GY
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 339 VVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYGRE 387
VH D+ N+L++ ++V +SDFG++++L GK +R + I Y +
Sbjct: 169 -VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 388 GQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ SDV+ YGI L E + ++P E+
Sbjct: 227 --FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 225 LIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKI 279
++G G FG V GR + VAIK + + + + F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYSNP 338
+ +V EYM NGSL+ L + + Q + ++ +A ++YL GY
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 339 VVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYGRE 387
VH D+ N+L++ ++V +SDFG++++L GK +R + I Y +
Sbjct: 169 -VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 388 GQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ SDV+ YGI L E + ++P E+
Sbjct: 227 --FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 225 LIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKI 279
++G G FG V GR + VAIK + + + + F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYSNP 338
+ +V EYM NGSL+ L + + Q + ++ +A ++YL GY
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 339 VVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYGRE 387
VH D+ N+L++ ++V +SDFG++++L GK +R + I Y +
Sbjct: 169 -VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 388 GQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ SDV+ YGI L E + ++P E+
Sbjct: 227 --FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHC 342
S +V+EYM+ G L L G + + RL ++D+A + + + VH
Sbjct: 83 SEEPI-YIVMEYMSKGCLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLK 269
L + S ++G G FG V GR + VAIK + + + + F E ++
Sbjct: 40 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
H N++++ + +V EYM NGSL+ L + + Q + ++ +A ++
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 159
Query: 330 YL-HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQ 377
YL GY VH D+ N+L++ ++V +SDFG++++L GK +R
Sbjct: 160 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ I Y + + SDV+ YGI L E + ++P E+
Sbjct: 216 SPEAIAYRK---FTSASDVWSYGIVLWEVMSYGERPYWEM 252
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG GSFGTVYKG++ +VA+K+ ++ L++F E VL+ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ A+V ++ SL L+ ++ + + I A ++YLH + ++H D
Sbjct: 74 TAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL------------LNGKESMRTQTLATIEYGREGQVS 391
+K +N+ L +D+ + DFG+A + L+G S+ I + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG--SILWMAPEVIRMQDKNPYS 187
Query: 392 PKSDVYGYGITLIETFTKKKPTCEI 416
+SDVY +GI L E T + P I
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLK 269
L + S ++G G FG V GR + VAIK + + + + F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
H N++++ + +V EYM NGSL+ L + + Q + ++ +A ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 330 YL-HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQ 377
YL GY VH D+ N+L++ ++V +SDFG++++L GK +R
Sbjct: 162 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ I Y + + SDV+ YGI L E + ++P E+
Sbjct: 218 SPEAIAYRK---FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
S +V EYM+ GSL L G L + Q + + +A + Y+ VH
Sbjct: 249 SEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
IG G+ GTVY G EVAI+ +LQ + E V++ ++ N+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
G+ +V+EY+A GSL + + +D Q ++ + ALE+LH SN V+H +I
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRNI 143
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS-----PKSDVYGY 399
K N+LL D L+DFG + ++S R+ + T + V+ PK D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 400 GITLIETFTKKKP 412
GI IE + P
Sbjct: 204 GIMAIEMIEGEPP 216
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 225 LIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKI 279
++G G FG V GR + VAIK + + + + F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYSNP 338
+ +V EYM NGSL+ L + + Q + ++ +A ++YL GY
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY--- 168
Query: 339 VVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYGRE 387
VH D+ N+L++ ++V +SDFG+ ++L GK +R + I Y +
Sbjct: 169 -VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 388 GQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ SDV+ YGI L E + ++P E+
Sbjct: 227 --FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG GSFGTVYKG++ +VA+K+ ++ L++F E VL+ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ A+V ++ SL L+ ++ + + I A ++YLH + ++H D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 344 IKPSNVLLDDDMVAHLSDFGIA------------KLLNGKESMRTQTLATIEYGREGQVS 391
+K +N+ L +D+ + DFG+A + L+G S+ I + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG--SILWMAPEVIRMQDKNPYS 187
Query: 392 PKSDVYGYGITLIETFTKKKPTCEI 416
+SDVY +GI L E T + P I
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 201 PQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS 260
PQ W + E+ T E+ +G G FG V+ G + +VA+K Q + +
Sbjct: 8 PQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA 63
Query: 261 FDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLS 319
F AE ++K ++H+ LV++ + + ++ EYM NGSL L + +GI L I + L
Sbjct: 64 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 320 IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQT 378
+ +A + ++ +H D++ +N+L+ D + ++DFG+A+L+ E + R
Sbjct: 123 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 179
Query: 379 LATIEYGRE-----GQVSPKSDVYGYGITLIETFTKKK 411
I++ G + KSDV+ +GI L E T +
Sbjct: 180 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 201 PQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS 260
PQ W + E+ T E+ +G G FG V+ G + +VA+K Q + +
Sbjct: 1 PQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDA 56
Query: 261 FDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLS 319
F AE ++K ++H+ LV++ + + ++ EYM NGSL L + +GI L I + L
Sbjct: 57 FLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 320 IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQT 378
+ +A + ++ +H D++ +N+L+ D + ++DFG+A+L+ E + R
Sbjct: 116 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 172
Query: 379 LATIEYGRE-----GQVSPKSDVYGYGITLIETFTKKK 411
I++ G + KSDV+ +GI L E T +
Sbjct: 173 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 15/219 (6%)
Query: 200 SPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALK 259
PQ W + E+ T E+ +G G FG V+ G + +VA+K Q +
Sbjct: 6 KPQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPD 61
Query: 260 SFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRL 318
+F AE ++K ++H+ LV++ + + ++ EYM NGSL L + +GI L I + L
Sbjct: 62 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 120
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQ 377
+ +A + ++ +H D++ +N+L+ D + ++DFG+A+L+ E + R
Sbjct: 121 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 177
Query: 378 TLATIEYGRE-----GQVSPKSDVYGYGITLIETFTKKK 411
I++ G + KSDV+ +GI L E T +
Sbjct: 178 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 15/219 (6%)
Query: 200 SPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALK 259
PQ W + E+ T E+ +G G FG V+ G + +VA+K Q +
Sbjct: 3 KPQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPD 58
Query: 260 SFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRL 318
+F AE ++K ++H+ LV++ + + ++ EYM NGSL L + +GI L I + L
Sbjct: 59 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 117
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQ 377
+ +A + ++ +H D++ +N+L+ D + ++DFG+A+L+ E + R
Sbjct: 118 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 174
Query: 378 TLATIEYGRE-----GQVSPKSDVYGYGITLIETFTKKK 411
I++ G + KSDV+ +GI L E T +
Sbjct: 175 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 15/219 (6%)
Query: 200 SPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALK 259
PQ W + E+ T E+ +G G FG V+ G + +VA+K Q +
Sbjct: 4 KPQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPD 59
Query: 260 SFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRL 318
+F AE ++K ++H+ LV++ + + ++ EYM NGSL L + +GI L I + L
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 118
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQ 377
+ +A + ++ +H D++ +N+L+ D + ++DFG+A+L+ E + R
Sbjct: 119 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 175
Query: 378 TLATIEYGRE-----GQVSPKSDVYGYGITLIETFTKKK 411
I++ G + KSDV+ +GI L E T +
Sbjct: 176 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 15/219 (6%)
Query: 200 SPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALK 259
PQ W + E+ T E+ +G G FG V+ G + +VA+K Q +
Sbjct: 4 KPQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPD 59
Query: 260 SFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRL 318
+F AE ++K ++H+ LV++ + + ++ EYM NGSL L + +GI L I + L
Sbjct: 60 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 118
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQ 377
+ +A + ++ +H D++ +N+L+ D + ++DFG+A+L+ E + R
Sbjct: 119 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 175
Query: 378 TLATIEYGRE-----GQVSPKSDVYGYGITLIETFTKKK 411
I++ G + KSDV+ +GI L E T +
Sbjct: 176 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYL-HFGYSNPVVH 341
S +V EYM GSL L G L + Q + + +A + Y+ Y VH
Sbjct: 80 SEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY----VH 134
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSD 395
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 396 VYGYGITLIETFTKKK 411
V+ +GI L E TK +
Sbjct: 195 VWSFGILLTELTTKGR 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285
+G G FG V+ G + +VA+K Q + +F AE ++K ++H+ LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 286 GNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
++ EYM NGSL L + +GI L I + L + +A + ++ +H D+
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQTLATIEYGRE-----GQVSPKSDVYG 398
+ +N+L+ D + ++DFG+A+L+ E + R I++ G + KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 399 YGITLIETFTKKK 411
+GI L E T +
Sbjct: 196 FGILLTEIVTHGR 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 115/229 (50%), Gaps = 17/229 (7%)
Query: 185 YRKGN----TELSNIEVNMSPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFL 240
Y+KGN +LS ++ PQ W + +++ + + + +G G FG V+ +
Sbjct: 148 YKKGNDGLCQKLSVPCMSSKPQKPWEKDAWE---IPRESLKLEKKLGAGQFGEVWMATYN 204
Query: 241 DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGS 300
+VA+K ++++F AE V+K+++H LVK+ + + ++ E+MA GS
Sbjct: 205 KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGS 262
Query: 301 LEKCLYSSNGILDIFQRLSIMIDVALAL-EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHL 359
L L S G Q L +ID + + E + F +H D++ +N+L+ +V +
Sbjct: 263 LLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI 319
Query: 360 SDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+DFG+A+ + K ++ I + G + KSDV+ +GI L+E T
Sbjct: 320 ADFGLAR-VGAKFPIKWTAPEAINF---GSFTIKSDVWSFGILLMEIVT 364
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYL-HFGYSNPVVH 341
S +V EYM GSL L G L + Q + + +A + Y+ Y VH
Sbjct: 80 SEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY----VH 134
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSD 395
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 396 VYGYGITLIETFTKKK 411
V+ +GI L E TK +
Sbjct: 195 VWSFGILLTELTTKGR 210
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 223 KSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG G G V GR + VAIK + + + F +E ++ H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYS 336
++ + G +V EYM NGSL+ L + +G I Q + ++ V + YL GY
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY- 172
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYG 385
VH D+ NVL+D ++V +SDFG++++L GK +R I +
Sbjct: 173 ---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAF- 228
Query: 386 REGQVSPKSDVYGYGITLIETFT 408
S SDV+ +G+ + E
Sbjct: 229 --RTFSSASDVWSFGVVMWEVLA 249
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG GSFGTVYKG++ +VA+K+ ++ L++F E VL+ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ A+V ++ SL L++S ++ + + I A ++YLH + ++H D
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 344 IKPSNVLLDDDMVAHLSDFGIA------------KLLNGKESMRTQTLATIEYGREGQVS 391
+K +N+ L +D + DFG+A + L+G S+ I S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG--SILWMAPEVIRMQDSNPYS 203
Query: 392 PKSDVYGYGITLIETFTKKKPTCEI 416
+SDVY +GI L E T + P I
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSNI 228
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSC 283
+G G FG V G++ +VAIK+ +G++ F E +V+ ++ H LV++ C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ ++ EYMANG L L Q L + DV A+EYL S +H D
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 130
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL---------LNGKESMRTQTLATIEYGREGQVSPKS 394
+ N L++D V +SDFG+++ + K +R + Y + S KS
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK---FSSKS 187
Query: 395 DVYGYGITLIETFTKKKPTCEIF 417
D++ +G+ + E ++ K E F
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERF 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285
+G G FG V+ G + +VA+K Q + +F AE ++K ++H+ LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 286 GNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
++ EYM NGSL L + +GI L I + L + +A + ++ +H D+
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQTLATIEYGRE-----GQVSPKSDVYG 398
+ +N+L+ D + ++DFG+A+L+ E + R I++ G + KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 399 YGITLIETFTKKK 411
+GI L E T +
Sbjct: 196 FGILLTEIVTHGR 208
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 15/219 (6%)
Query: 200 SPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALK 259
PQ W + E+ T E+ +G G FG V+ G + +VA+K Q +
Sbjct: 8 KPQKPWWEDEW-EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPD 63
Query: 260 SFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRL 318
+F AE ++K ++H+ LV++ + + ++ EYM NGSL L + +GI L I + L
Sbjct: 64 AFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLL 122
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQ 377
+ +A + ++ +H D++ +N+L+ D + ++DFG+A+L+ E + R
Sbjct: 123 DMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 179
Query: 378 TLATIEYGRE-----GQVSPKSDVYGYGITLIETFTKKK 411
I++ G + KSDV+ +GI L E T +
Sbjct: 180 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 64
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 125 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 181
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 117/235 (49%), Gaps = 19/235 (8%)
Query: 185 YRKGN----TELSNIEVNMSPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFL 240
Y+KGN +LS ++ PQ W + +++ + + + +G G FG V+ +
Sbjct: 154 YKKGNDGLCQKLSVPCMSSKPQKPWEKDAWE---IPRESLKLEKKLGAGQFGEVWMATYN 210
Query: 241 DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGS 300
+VA+K ++++F AE V+K+++H LVK+ + + ++ E+MA GS
Sbjct: 211 KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGS 268
Query: 301 LEKCLYSSNGILDIFQRLSIMIDVALAL-EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHL 359
L L S G Q L +ID + + E + F +H D++ +N+L+ +V +
Sbjct: 269 LLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKI 325
Query: 360 SDFGIAKLLNGKE-SMRTQTLATIEYGRE-----GQVSPKSDVYGYGITLIETFT 408
+DFG+A+++ E + R I++ G + KSDV+ +GI L+E T
Sbjct: 326 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSC 283
+G G FG V G++ +VAIK+ +G++ F E +V+ ++ H LV++ C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ ++ EYMANG L L Q L + DV A+EYL S +H D
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 145
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL---------LNGKESMRTQTLATIEYGREGQVSPKS 394
+ N L++D V +SDFG+++ + K +R + Y + S KS
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK---FSSKS 202
Query: 395 DVYGYGITLIETFTKKKPTCEIF 417
D++ +G+ + E ++ K E F
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERF 225
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 69
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 130 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 186
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285
+G G FG V+ G + +VA+K Q + +F AE ++K ++H+ LV++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 286 GNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
++ EYM NGSL L + +GI L I + L + +A + ++ +H D+
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 136
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQTLATIEYGRE-----GQVSPKSDVYG 398
+ +N+L+ D + ++DFG+A+L+ E + R I++ G + KSDV+
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 196
Query: 399 YGITLIETFTKKK 411
+GI L E T +
Sbjct: 197 FGILLTEIVTHGR 209
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285
+G G FG V+ G + +VA+K Q + +F AE ++K ++H+ LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 286 GNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
++ EYM NGSL L + +GI L I + L + +A + ++ +H D+
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQTLATIEYGRE-----GQVSPKSDVYG 398
+ +N+L+ D + ++DFG+A+L+ E + R I++ G + KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 399 YGITLIETFTKKK 411
+GI L E T +
Sbjct: 196 FGILLTEIVTHGR 208
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 223 KSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG G G V GR + VAIK + + + F +E ++ H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYS 336
++ + G +V EYM NGSL+ L + +G I Q + ++ V + YL GY
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY- 172
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYG 385
VH D+ NVL+D ++V +SDFG++++L GK +R I +
Sbjct: 173 ---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF- 228
Query: 386 REGQVSPKSDVYGYGITLIETFT 408
S SDV+ +G+ + E
Sbjct: 229 --RTFSSASDVWSFGVVMWEVLA 249
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSC 283
+G G FG V G++ +VAIK+ +G++ F E +V+ ++ H LV++ C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ ++ EYMANG L L Q L + DV A+EYL S +H D
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 130
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVSPKS 394
+ N L++D V +SDFG+++ + K +R + Y + S KS
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSK---FSSKS 187
Query: 395 DVYGYGITLIETFTKKKPTCEIF 417
D++ +G+ + E ++ K E F
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERF 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 223 KSLIGIGSFGTVYKGRF-LDG---MEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG G FG V GR L G + VAIK + + + + F E ++ H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYS 336
+ + +V EYM NGSL+ L ++G + Q + ++ ++ ++YL GY
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY- 145
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYG 385
VH D+ N+L++ ++V +SDFG++++L GK +R I +
Sbjct: 146 ---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 386 REGQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ + SDV+ YGI + E + ++P E+
Sbjct: 203 K---FTSASDVWSYGIVMWEVVSYGERPYWEM 231
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 126 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSC 283
+G G FG V G++ +VAIK+ +G++ F E +V+ ++ H LV++ C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ ++ EYMANG L L Q L + DV A+EYL S +H D
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 129
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL---------LNGKESMRTQTLATIEYGREGQVSPKS 394
+ N L++D V +SDFG+++ + K +R + Y + S KS
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK---FSSKS 186
Query: 395 DVYGYGITLIETFTKKKPTCEIF 417
D++ +G+ + E ++ K E F
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERF 209
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSC 283
+G G FG V G++ +VAIK+ +G++ F E +V+ ++ H LV++ C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ ++ EYMANG L L Q L + DV A+EYL S +H D
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 125
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL---------LNGKESMRTQTLATIEYGREGQVSPKS 394
+ N L++D V +SDFG+++ + K +R + Y + S KS
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK---FSSKS 182
Query: 395 DVYGYGITLIETFTKKKPTCEIF 417
D++ +G+ + E ++ K E F
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERF 205
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 126 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHC 342
S +V EYM+ GSL L G + + RL ++D+A + + + VH
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D+ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285
+G G FG V+ G + +VA+K Q + +F AE ++K ++H+ LV++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 286 GNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
++ EYM NGSL L + +GI L I + L + +A + ++ +H D+
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 130
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQTLATIEYGRE-----GQVSPKSDVYG 398
+ +N+L+ D + ++DFG+A+L+ E + R I++ G + KSDV+
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 190
Query: 399 YGITLIETFTKKK 411
+GI L E T +
Sbjct: 191 FGILLTEIVTHGR 203
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSC 283
+G G FG V G++ +VAIK+ +G++ F E +V+ ++ H LV++ C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ ++ EYMANG L L Q L + DV A+EYL S +H D
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRD 136
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKL---------LNGKESMRTQTLATIEYGREGQVSPKS 394
+ N L++D V +SDFG+++ + K +R + Y + S KS
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK---FSSKS 193
Query: 395 DVYGYGITLIETFTKKKPTCEIF 417
D++ +G+ + E ++ K E F
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERF 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 144 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 63
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 124 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 70
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 131 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 187
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 129 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 72
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 133 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 189
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 96
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 157 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 213
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 71
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 132 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 188
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 144 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 12/193 (6%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285
+G G FG V+ G + VAIK + + ++F E +V+K +RH LV++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 286 GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHCDI 344
+V EYM+ GSL L G + + RL ++D+A + + + VH D+
Sbjct: 252 EPI-YIVTEYMSKGSLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 307
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDVYG 398
+ +N+L+ +++V ++DFG+ +L+ E Q E G+ + KSDV+
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 399 YGITLIETFTKKK 411
+GI L E TK +
Sbjct: 368 FGILLTELTTKGR 380
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L + +D + L +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQT------- 378
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 129 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 379 LATIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + VAIK G + ++F E +V+K +RH LV++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY-LHFGYSNPVVHC 342
S +V EYM+ G L L G + + RL ++D+A + + + VH
Sbjct: 83 SEEPI-YIVTEYMSKGCLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSDV 396
D++ +N+L+ +++V ++DFG+A+L+ E Q E G+ + KSDV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 397 YGYGITLIETFTKKK 411
+ +GI L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Query: 2 LSLGSNELSSVIPSTFWNLN-SILSFDFSSNSLNGS-LPLDIENMK-VVVEINLSRNYLT 58
L L NE S +P + NL+ S+L+ D SSN+ +G LP +N K + E+ L N T
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 59 GDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVY 118
G IPPT+ + L L L N L G IP S G L+ L L L +N L G IP L +
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 119 LKDLNLSFNRLKGDIPT 135
L+ L L FN L G+IP+
Sbjct: 465 LETLILDFNDLTGEIPS 481
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 70/134 (52%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L L N LS IPS+ +L+ + N L G +P ++ +K + + L N LTG+I
Sbjct: 420 LHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI 479
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKD 121
P + TNL +SL NNRL G IP+ G L +L L LS N+ SG IP L L
Sbjct: 480 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIW 539
Query: 122 LNLSFNRLKGDIPT 135
L+L+ N G IP
Sbjct: 540 LDLNTNLFNGTIPA 553
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%)
Query: 16 TFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLS 75
TF N S++ D S N L+G +P +I +M + +NL N ++G IP +G L L +L
Sbjct: 624 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 683
Query: 76 LENNRLQGPIPESFGELTSLESLDLSVNNLSGVIP 110
L +N+L G IP++ LT L +DLS NNLSG IP
Sbjct: 684 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%)
Query: 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGD 60
+L L N L IP + ++ + N L G +P + N + I+LS N LTG+
Sbjct: 443 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 502
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEK 115
IP IG L NL +L L NN G IP G+ SL LDL+ N +G IP ++ K
Sbjct: 503 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%)
Query: 41 IENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDL 100
+N ++ +++S N L+G IP IG + L +L+L +N + G IP+ G+L L LDL
Sbjct: 625 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 684
Query: 101 SVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPTRSPHLQVPLCK 146
S N L G IP ++ L L +++LS N L G IP P K
Sbjct: 685 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAK 730
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L L +N + IP T N + ++S S N L+G++P + ++ + ++ L N L G+I
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKD 121
P + + L+ L L+ N L G IP T+L + LS N L+G IP + +L L
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 515
Query: 122 LNLSFNRLKGDIPTR 136
L LS N G+IP
Sbjct: 516 LKLSNNSFSGNIPAE 530
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 29/169 (17%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L + SN S+ IP + +++ D S N L+G I + +N+S N G I
Sbjct: 202 LDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 260
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESF-GELTSLESLDLS------------------- 101
PP L +LQ LSL N+ G IP+ G +L LDLS
Sbjct: 261 PPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 318
Query: 102 -----VNNLSGVIPI-SLEKLVYLKDLNLSFNRLKGDIPTRSPHLQVPL 144
NN SG +P+ +L K+ LK L+LSFN G++P +L L
Sbjct: 319 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASL 367
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L + N LS IP ++ + + N ++GS+P ++ +++ + ++LS N L G I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPE 87
P + LT L + L NN L GPIPE
Sbjct: 694 PQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 20 LNSILSFDFSSNSLNGSLPLDI---ENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSL 76
LNS+ D S+NS++G+ + + + + +S N ++GD+ + NL+ L +
Sbjct: 147 LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDV 204
Query: 77 ENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134
+N IP G+ ++L+ LD+S N LSG ++ LK LN+S N+ G IP
Sbjct: 205 SSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 261
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 47 VVEINLSRNYLTGDIPP--TIGGLTNLQLLSLENNRLQGPIPESFG-ELTSLESLDLSVN 103
+ ++LSRN L+G + ++G + L+ L++ +N L P S G +L SLE LDLS N
Sbjct: 99 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 158
Query: 104 NLSGVIPISL---EKLVYLKDLNLSFNRLKGDI 133
++SG + + LK L +S N++ GD+
Sbjct: 159 SISGANVVGWVLSDGCGELKHLAISGNKISGDV 191
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 225 LIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKI 279
++G G FG V GR + VAIK + + + + F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYSNP 338
+ +V EYM NGSL+ L + + Q + ++ +A ++YL G+
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGF--- 168
Query: 339 VVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYGRE 387
VH D+ N+L++ ++V +SDFG++++L GK +R + I Y +
Sbjct: 169 -VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK- 226
Query: 388 GQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ SDV+ YGI L E + ++P E+
Sbjct: 227 --FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 126 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Query: 2 LSLGSNELSSVIPSTFWNLN-SILSFDFSSNSLNGS-LPLDIENMK-VVVEINLSRNYLT 58
L L NE S +P + NL+ S+L+ D SSN+ +G LP +N K + E+ L N T
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 59 GDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVY 118
G IPPT+ + L L L N L G IP S G L+ L L L +N L G IP L +
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 119 LKDLNLSFNRLKGDIPT 135
L+ L L FN L G+IP+
Sbjct: 468 LETLILDFNDLTGEIPS 484
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 70/134 (52%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L L N LS IPS+ +L+ + N L G +P ++ +K + + L N LTG+I
Sbjct: 423 LHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI 482
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKD 121
P + TNL +SL NNRL G IP+ G L +L L LS N+ SG IP L L
Sbjct: 483 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIW 542
Query: 122 LNLSFNRLKGDIPT 135
L+L+ N G IP
Sbjct: 543 LDLNTNLFNGTIPA 556
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%)
Query: 16 TFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLS 75
TF N S++ D S N L+G +P +I +M + +NL N ++G IP +G L L +L
Sbjct: 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 686
Query: 76 LENNRLQGPIPESFGELTSLESLDLSVNNLSGVIP 110
L +N+L G IP++ LT L +DLS NNLSG IP
Sbjct: 687 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%)
Query: 41 IENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDL 100
+N ++ +++S N L+G IP IG + L +L+L +N + G IP+ G+L L LDL
Sbjct: 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDL 687
Query: 101 SVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPTRSPHLQVPLCK 146
S N L G IP ++ L L +++LS N L G IP P K
Sbjct: 688 SSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAK 733
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%)
Query: 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGD 60
+L L N L IP + ++ + N L G +P + N + I+LS N LTG+
Sbjct: 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEK 115
IP IG L NL +L L NN G IP G+ SL LDL+ N +G IP ++ K
Sbjct: 506 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L L +N + IP T N + ++S S N L+G++P + ++ + ++ L N L G+I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKD 121
P + + L+ L L+ N L G IP T+L + LS N L+G IP + +L L
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 518
Query: 122 LNLSFNRLKGDIPTR 136
L LS N G+IP
Sbjct: 519 LKLSNNSFSGNIPAE 533
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 29/169 (17%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L + SN S+ IP + +++ D S N L+G I + +N+S N G I
Sbjct: 205 LDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 263
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESF-GELTSLESLDLS------------------- 101
PP L +LQ LSL N+ G IP+ G +L LDLS
Sbjct: 264 PPLP--LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 321
Query: 102 -----VNNLSGVIPI-SLEKLVYLKDLNLSFNRLKGDIPTRSPHLQVPL 144
NN SG +P+ +L K+ LK L+LSFN G++P +L L
Sbjct: 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASL 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L + N LS IP ++ + + N ++GS+P ++ +++ + ++LS N L G I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPE 87
P + LT L + L NN L GPIPE
Sbjct: 697 PQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 20 LNSILSFDFSSNSLNGSLPLDI---ENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSL 76
LNS+ D S+NS++G+ + + + + +S N ++GD+ + NL+ L +
Sbjct: 150 LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDV 207
Query: 77 ENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134
+N IP G+ ++L+ LD+S N LSG ++ LK LN+S N+ G IP
Sbjct: 208 SSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 47 VVEINLSRNYLTGDIPP--TIGGLTNLQLLSLENNRLQGPIPESFG-ELTSLESLDLSVN 103
+ ++LSRN L+G + ++G + L+ L++ +N L P S G +L SLE LDLS N
Sbjct: 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161
Query: 104 NLSGVIPISL---EKLVYLKDLNLSFNRLKGDI 133
++SG + + LK L +S N++ GD+
Sbjct: 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDV 194
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++E++ GSL + L +D + L +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICK 128
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLA----- 380
+EYL + +H D+ N+L++++ + DFG+ K+L KE + +
Sbjct: 129 GMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 381 --TIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 21/198 (10%)
Query: 219 HFSEKSLIGIGSFGTVYKGRF-LDGMEVAIKVFHLQFDGALKSFDA------ECEVLKSV 271
H+ +G+G+FG V G+ L G +VA+K+ + Q ++S D E + LK
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQ---KIRSLDVVGKIRREIQNLKLF 73
Query: 272 RHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
RH +++K+ S + +V+EY++ G L + NG LD + + + ++Y
Sbjct: 74 RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYC 132
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS 391
H + VVH D+KP NVLLD M A ++DFG++ +++ E +R + + Y +S
Sbjct: 133 H---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRX-SCGSPNYAAPEVIS 188
Query: 392 ------PKSDVYGYGITL 403
P+ D++ G+ L
Sbjct: 189 GRLYAGPEVDIWSSGVIL 206
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
D ++ ++G G++G VY GR L + + +AIK + + E + K ++H+N+
Sbjct: 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 81
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGIL-DIFQRLSIMIDVAL-ALEYLHFG 334
V+ + S S F + +E + GSL L S G L D Q + L L+YLH
Sbjct: 82 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH-- 139
Query: 335 YSNPVVHCDIKPSNVLLDD-DMVAHLSDFGIAKLLNGKESMRTQTLATIEY--------G 385
N +VH DIK NVL++ V +SDFG +K L G T++Y G
Sbjct: 140 -DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 386 REGQVSPKSDVYGYGITLIETFTKKKPTCEI 416
G +D++ G T+IE T K P E+
Sbjct: 199 PRG-YGKAADIWSLGCTIIEMATGKPPFYEL 228
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
D ++ ++G G++G VY GR L + + +AIK + + E + K ++H+N+
Sbjct: 8 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGIL-DIFQRLSIMIDVAL-ALEYLHFG 334
V+ + S S F + +E + GSL L S G L D Q + L L+YLH
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH-- 125
Query: 335 YSNPVVHCDIKPSNVLLDD-DMVAHLSDFGIAKLLNGKESMRTQTLATIEY--------G 385
N +VH DIK NVL++ V +SDFG +K L G T++Y G
Sbjct: 126 -DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 184
Query: 386 REGQVSPKSDVYGYGITLIETFTKKKPTCEI 416
G +D++ G T+IE T K P E+
Sbjct: 185 PRG-YGKAADIWSLGCTIIEMATGKPPFYEL 214
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 226 IGIGSFGTVYKGRF-LDGMEVAIKVFHLQFDGALKS-FDAECEVLKSVRHRNLVKIISSC 283
IG G+FG V+ GR D VA+K LK+ F E +LK H N+V++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ +V+E + G L + L + L ++ D A +EYL S +H D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 344 IKPSNVLLDDDMVAHLSDFGIAK--------LLNGKESMRTQTLA--TIEYGREGQVSPK 393
+ N L+ + V +SDFG+++ G + + A + YGR S +
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGR---YSSE 295
Query: 394 SDVYGYGITLIETFT 408
SDV+ +GI L ETF+
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 223 KSLIGIGSFGTVYKGRF-LDGME---VAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG+G FG V GR + G VAIK + D + F +E ++ H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ + ++ EYM NGSL+ L ++G + Q + ++ + ++YL
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DM 150
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYGR 386
VH D+ N+L++ ++V +SDFG++++L GK +R I Y +
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 387 EGQVSPKSDVYGYGITLIETFT 408
+ SDV+ YGI + E +
Sbjct: 211 ---FTSASDVWSYGIVMWEVMS 229
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 226 IGIGSFGTVYKGRF-LDGMEVAIKVFHLQFDGALKS-FDAECEVLKSVRHRNLVKIISSC 283
IG G+FG V+ GR D VA+K LK+ F E +LK H N+V++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ +V+E + G L + L + L ++ D A +EYL S +H D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 344 IKPSNVLLDDDMVAHLSDFGIAK--------LLNGKESMRTQTLA--TIEYGREGQVSPK 393
+ N L+ + V +SDFG+++ G + + A + YGR S +
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR---YSSE 295
Query: 394 SDVYGYGITLIETFT 408
SDV+ +GI L ETF+
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 223 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD----GALKSFDAECEVLKSVRHRNLVK 278
+ +IGIG FG VY+ F G EVA+K D +++ E ++ ++H N++
Sbjct: 12 EEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP 338
+ C LV+E+ G L + L DI ++ I A + YLH P
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI--ARGMNYLHDEAIVP 128
Query: 339 VVHCDIKPSNVLL-----DDDM---VAHLSDFGIAKLLNGKESMRTQ---TLATIEYGRE 387
++H D+K SN+L+ + D+ + ++DFG+A+ + M E R
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRA 188
Query: 388 GQVSPKSDVYGYGITLIETFTKKKP 412
S SDV+ YG+ L E T + P
Sbjct: 189 SMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285
+G G FG V+ G + +VA+K Q + +F AE ++K ++H+ LV++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 286 GNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
++ EYM NGSL L + +GI L I + L + +A + ++ +H ++
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNL 131
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQTLATIEYGRE-----GQVSPKSDVYG 398
+ +N+L+ D + ++DFG+A+L+ E + R I++ G + KSDV+
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 191
Query: 399 YGITLIETFTKKK 411
+GI L E T +
Sbjct: 192 FGILLTEIVTHGR 204
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 223 KSLIGIGSFGTVYKGRF-LDGME---VAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG+G FG V GR + G VAIK + D + F +E ++ H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ + ++ EYM NGSL+ L ++G + Q + ++ + ++YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DM 135
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYGR 386
VH D+ N+L++ ++V +SDFG++++L GK +R I Y +
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 387 EGQVSPKSDVYGYGITLIETFT 408
+ SDV+ YGI + E +
Sbjct: 196 ---FTSASDVWSYGIVMWEVMS 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLK 269
L + S ++G G FG V GR + VAIK + + + + F E ++
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
H N++++ + +V E M NGSL+ L + + Q + ++ +A ++
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 330 YL-HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQ 377
YL GY VH D+ N+L++ ++V +SDFG++++L GK +R
Sbjct: 133 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ I Y + + SDV+ YGI L E + ++P E+
Sbjct: 189 SPEAIAYRK---FTSASDVWSYGIVLWEVMSYGERPYWEM 225
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA ++YL
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVL 268
F E+ L +G G+FG+V R+ G VA+K + L+ F+ E E+L
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 66
Query: 269 KSVRHRNLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
KS++H N+VK C + L++EY+ GSL L +D + L +
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQT------- 378
+EYL + +H ++ N+L++++ + DFG+ K+L KE + +
Sbjct: 127 GMEYLG---TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF 183
Query: 379 LATIEYGREGQVSPKSDVYGYGITLIETFT 408
E E + S SDV+ +G+ L E FT
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 223 KSLIGIGSFGTVYKGRF-LDGME---VAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG+G FG V GR + G VAIK + D + F +E ++ H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ + ++ EYM NGSL+ L ++G + Q + ++ + ++YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DM 129
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYGR 386
VH D+ N+L++ ++V +SDFG++++L GK +R I Y +
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 387 EGQVSPKSDVYGYGITLIETFT 408
+ SDV+ YGI + E +
Sbjct: 190 ---FTSASDVWSYGIVMWEVMS 208
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLK 269
L + S ++G G FG V GR + VAIK + + + + F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
H N++++ + +V E M NGSL+ L + + Q + ++ +A ++
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 330 YL-HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQ 377
YL GY VH D+ N+L++ ++V +SDFG++++L GK +R
Sbjct: 162 YLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ I Y + + SDV+ YGI L E + ++P E+
Sbjct: 218 SPEAIAYRK---FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 18/196 (9%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISSC 283
+G G FG V+ G + +VAIK G + +SF E +++K ++H LV++ +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYL-HFGYSNPVVH 341
S +V EYM GSL L G L + + + VA + Y+ Y +H
Sbjct: 74 SEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY----IH 128
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ------TLATIEYGREGQVSPKSD 395
D++ +N+L+ + ++ ++DFG+A+L+ E Q E G+ + KSD
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 396 VYGYGITLIETFTKKK 411
V+ +GI L E TK +
Sbjct: 189 VWSFGILLTELVTKGR 204
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 52 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA ++YL
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 168
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA ++YL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 51 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA ++YL
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 167
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 25 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA ++YL
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 141
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 30 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA ++YL
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 146
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA ++YL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 12/193 (6%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285
+G G G V+ G + +VA+K Q + +F AE ++K ++H+ LV++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 286 GNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
++ EYM NGSL L + +GI L I + L + +A + ++ +H D+
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQTLATIEYGRE-----GQVSPKSDVYG 398
+ +N+L+ D + ++DFG+A+L+ E + R I++ G + KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 399 YGITLIETFTKKK 411
+GI L E T +
Sbjct: 196 FGILLTEIVTHGR 208
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA ++YL
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 28 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA ++YL
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 144
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA ++YL
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 147
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 21/198 (10%)
Query: 219 HFSEKSLIGIGSFGTVYKGRF-LDGMEVAIKVFHLQFDGALKSFDA------ECEVLKSV 271
H+ +G+G+FG V G L G +VA+K+ + Q ++S D E + LK
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLF 68
Query: 272 RHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
RH +++K+ S +V+EY++ G L + +G ++ + + + A++Y
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLFQQILSAVDYC 127
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS 391
H + VVH D+KP NVLLD M A ++DFG++ +++ E +RT + + Y +S
Sbjct: 128 H---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPEVIS 183
Query: 392 ------PKSDVYGYGITL 403
P+ D++ G+ L
Sbjct: 184 GRLYAGPEVDIWSCGVIL 201
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 36/219 (16%)
Query: 223 KSLIGIGSFGTVYKGRF------LDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
K +G G+FG V+ D M VA+K + A + F E E+L ++H+++
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYS--------------SNGILDIFQRLSIMI 322
V+ C+ G +V EYM +G L + L S + G L + Q L++
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 323 DVALALEYL---HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT--Q 377
VA + YL HF VH D+ N L+ +V + DFG+++ + + R +
Sbjct: 166 QVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 219
Query: 378 TLATIEYGREGQV-----SPKSDVYGYGITLIETFTKKK 411
T+ I + + + +SDV+ +G+ L E FT K
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 36/219 (16%)
Query: 223 KSLIGIGSFGTVYKGRF------LDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
K +G G+FG V+ D M VA+K + A + F E E+L ++H+++
Sbjct: 23 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 82
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYS--------------SNGILDIFQRLSIMI 322
V+ C+ G +V EYM +G L + L S + G L + Q L++
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 323 DVALALEYL---HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT--Q 377
VA + YL HF VH D+ N L+ +V + DFG+++ + + R +
Sbjct: 143 QVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 196
Query: 378 TLATIEYGREGQV-----SPKSDVYGYGITLIETFTKKK 411
T+ I + + + +SDV+ +G+ L E FT K
Sbjct: 197 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 235
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 36/219 (16%)
Query: 223 KSLIGIGSFGTVYKGRF------LDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
K +G G+FG V+ D M VA+K + A + F E E+L ++H+++
Sbjct: 17 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 76
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYS--------------SNGILDIFQRLSIMI 322
V+ C+ G +V EYM +G L + L S + G L + Q L++
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 323 DVALALEYL---HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT--Q 377
VA + YL HF VH D+ N L+ +V + DFG+++ + + R +
Sbjct: 137 QVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 190
Query: 378 TLATIEYGREGQV-----SPKSDVYGYGITLIETFTKKK 411
T+ I + + + +SDV+ +G+ L E FT K
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 38 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA +++L
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 154
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA +++L
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 202 QAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSF 261
Q W + +++ + + + +G G FG V+ + +VA+K ++++F
Sbjct: 2 QKPWEKDAWE---IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAF 57
Query: 262 DAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIM 321
AE V+K+++H LVK+ + + ++ E+MA GSL L S G Q L +
Sbjct: 58 LAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKL 113
Query: 322 IDVALAL-EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQTL 379
ID + + E + F +H D++ +N+L+ +V ++DFG+A+++ E + R
Sbjct: 114 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 173
Query: 380 ATIEYGRE-----GQVSPKSDVYGYGITLIETFT 408
I++ G + KSDV+ +GI L+E T
Sbjct: 174 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA +++L
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 147
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA +++L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA +++L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 223 KSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
K +G G+FG V+ D M VA+K A K F E E+L +++H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYS---------------SNGILDIFQRLSIM 321
VK C +G+ +V EYM +G L K L + + G L + Q L I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 322 IDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT--QTL 379
+A + YL S VH D+ N L+ +++ + DFG+++ + + R T+
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 380 ATIEYGREGQV-----SPKSDVYGYGITLIETFTKKK 411
I + + + +SDV+ +G+ L E FT K
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 92 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA +++L
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 208
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 23/209 (11%)
Query: 225 LIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKI 279
++G G FG V GR + VAIK + + + + F E ++ H N++++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPV 339
+ +V E M NGSL+ L + + Q + ++ +A ++YL
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGA 168
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLL-----------NGKESMRTQTLATIEYGREG 388
VH D+ N+L++ ++V +SDFG++++L GK +R + I Y +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK-- 226
Query: 389 QVSPKSDVYGYGITLIETFT-KKKPTCEI 416
+ SDV+ YGI L E + ++P E+
Sbjct: 227 -FTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDG----MEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
HF+E +IG G FG VY G LD + A+K + D G + F E ++K H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 274 RNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++ ++ C LV L YM +G L + + + + + VA +++L
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLA-------TIE 383
S VH D+ N +LD+ ++DFG+A+ + KE S+ +T A +E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 384 YGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ + + KSDV+ +G+ L E T+ P
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 14/191 (7%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSC 283
+G G FG V G++ +VA+K+ +G++ F E + + + H LVK C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK---EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
S +V EY++NG L L S L+ Q L + DV + +L S+ +H D
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRD 129
Query: 344 IKPSNVLLDDDMVAHLSDFGIAK-LLNGKESMRTQTLATIEYG-----REGQVSPKSDVY 397
+ N L+D D+ +SDFG+ + +L+ + T +++ + S KSDV+
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 398 GYGITLIETFT 408
+GI + E F+
Sbjct: 190 AFGILMWEVFS 200
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 20/237 (8%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFH--LQFDGALK-SFDAECEVLKSVR 272
+D + ++G G V+ R L D +VA+KV L D + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 273 HRNLVKII----SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
H +V + + G +V+EY+ +L +++ G + + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIAD---AC 126
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI------ 382
+ L+F + N ++H D+KP+N+++ + DFGIA+ + + TQT A I
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 383 --EYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVNDFLPISVMN 437
E R V +SDVY G L E T + P + + ++ D +P S +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARH 243
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME---VAIKVFHLQFDGALKSF-DAECEVLKSVRHRN 275
F++ IG GSFG V+KG +D VAIK+ L+ E VL
Sbjct: 25 FTKLERIGKGSFGEVFKG--IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
+ K S G+ +++EY+ GS L + G D FQ +++ ++ L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLH--- 137
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT-----IEYGREGQV 390
S +H DIK +NVLL + L+DFG+A L + R + T E ++
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 391 SPKSDVYGYGITLIETFTKKKPTCEI 416
K+D++ GIT IE + P ++
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 21/198 (10%)
Query: 219 HFSEKSLIGIGSFGTVYKGRF-LDGMEVAIKVFHLQFDGALKSFDA------ECEVLKSV 271
H+ +G+G+FG V G L G +VA+K+ + Q ++S D E + LK
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLF 68
Query: 272 RHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
RH +++K+ S +V+EY++ G L + +G ++ + + + A++Y
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLFQQILSAVDYC 127
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS 391
H + VVH D+KP NVLLD M A ++DFG++ +++ E +R + + Y +S
Sbjct: 128 H---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR-DSCGSPNYAAPEVIS 183
Query: 392 ------PKSDVYGYGITL 403
P+ D++ G+ L
Sbjct: 184 GRLYAGPEVDIWSCGVIL 201
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 26/208 (12%)
Query: 225 LIGIGSFGTVYKGRFL--DGMEVAIKVFHLQFDGA----LKSFDAECEVLKSVRHRNLVK 278
++G G FG+V +G DG + + V ++ D + ++ F +E +K H N+++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 279 IISSC----SNGNFEALV-LEYMANGSLEKCLYSSN-----GILDIFQRLSIMIDVALAL 328
++ C S G + +V L +M G L L S + + L M+D+AL +
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLA-------T 381
EYL + +H D+ N +L DDM ++DFG++K + + R +A
Sbjct: 161 EYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 382 IEYGREGQVSPKSDVYGYGITLIETFTK 409
IE + + KSDV+ +G+T+ E T+
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDG-ALKSFDAECEV 267
HF ++ L +G G FG V R+ G +VA+K + G + E E+
Sbjct: 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEI 76
Query: 268 LKSVRHRNLVKIISSCSN--GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVA 325
L+++ H N+VK C+ GN L++E++ +GSL++ L + +++ Q+L + +
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 326 LALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT----QTLAT 381
++YL S VH D+ NVL++ + + DFG+ K + + T +
Sbjct: 137 KGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 193
Query: 382 IEYGREGQVSPK----SDVYGYGITLIETFT 408
Y E + K SDV+ +G+TL E T
Sbjct: 194 FWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 26/208 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGMEV-AIKVFHL---QFDGALKSFDAECEVLKSVRHRN 275
FS+ IG GSFG VY R + EV AIK Q + + E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL----ALEYL 331
++ + LV+EY CL S++ +L++ ++ +++A AL+ L
Sbjct: 116 TIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES-------MRTQTLATIEY 384
+ +S+ ++H D+K N+LL + + L DFG A ++ M + + ++
Sbjct: 168 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMD- 226
Query: 385 GREGQVSPKSDVYGYGITLIETFTKKKP 412
EGQ K DV+ GIT IE +K P
Sbjct: 227 --EGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 223 KSLIGIGSFGTVYKGRF-LDGME---VAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG G FG V G L G VAIK + + + F +E ++ H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYS 336
+ + ++ E+M NGSL+ L ++G + Q + ++ +A ++YL Y
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY- 156
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL-------------LNGKESMRTQTLATIE 383
VH D+ N+L++ ++V +SDFG+++ L GK +R I+
Sbjct: 157 ---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 384 YGREGQVSPKSDVYGYGITLIETFT 408
Y + + SDV+ YGI + E +
Sbjct: 214 YRK---FTSASDVWSYGIVMWEVMS 235
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 219 HFSEKSL-----IGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDG-ALKSFDAECEV 267
HF ++ L +G G FG V R+ G +VA+K + G + E E+
Sbjct: 5 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEI 64
Query: 268 LKSVRHRNLVKIISSCSN--GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVA 325
L+++ H N+VK C+ GN L++E++ +GSL++ L + +++ Q+L + +
Sbjct: 65 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 124
Query: 326 LALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT----QTLAT 381
++YL S VH D+ NVL++ + + DFG+ K + + T +
Sbjct: 125 KGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
Query: 382 IEYGREGQVSPK----SDVYGYGITLIETFT 408
Y E + K SDV+ +G+TL E T
Sbjct: 182 FWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285
+G G FG V+ G + + +VA+K ++++F E ++K+++H LV++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 286 GNFEALVLEYMANGSLEKCLYSSNGILDIFQRL-SIMIDVALALEYLHFGYSNPVVHCDI 344
++ EYMA GSL L S G + +L +A + Y+ +H D+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 136
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQTLATIEYGRE-----GQVSPKSDVYG 398
+ +NVL+ + ++ ++DFG+A+++ E + R I++ G + KSDV+
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 399 YGITLIETFTKKK 411
+GI L E T K
Sbjct: 197 FGILLYEIVTYGK 209
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
+G GS+G+VYK + G VAIK ++ D L+ E +++ ++VK S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
+V+EY GS+ + N L + +I+ LEYLHF +H DI
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDI 151
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT-----IEYGREGQVSPKSDVYGY 399
K N+LL+ + A L+DFG+A L + R + T E +E + +D++
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSL 211
Query: 400 GITLIETFTKKKPTCEI 416
GIT IE K P +I
Sbjct: 212 GITAIEMAEGKPPYADI 228
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFH--LQFDGALK-SFDAECEVLKSVR 272
+D + ++G G V+ R L D +VA+KV L D + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 273 HRNLVKII----SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
H +V + + G +V+EY+ +L +++ G + + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIAD---AC 126
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI------ 382
+ L+F + N ++H D+KP+N+++ + DFGIA+ + + TQT A I
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 383 --EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
E R V +SDVY G L E T + P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 26/208 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGMEV-AIKVFHL---QFDGALKSFDAECEVLKSVRHRN 275
FS+ IG GSFG VY R + EV AIK Q + + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL----ALEYL 331
++ + LV+EY CL S++ +L++ ++ +++A AL+ L
Sbjct: 77 TIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES-------MRTQTLATIEY 384
+ +S+ ++H D+K N+LL + + L DFG A ++ M + + ++
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMD- 187
Query: 385 GREGQVSPKSDVYGYGITLIETFTKKKP 412
EGQ K DV+ GIT IE +K P
Sbjct: 188 --EGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 223 KSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
K +G G+FG V+ D + VA+K D A K F E E+L +++H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCL--YSSNGI----------LDIFQRLSIMIDV 324
VK C G+ +V EYM +G L K L + + + L Q L I +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 325 ALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT--QTLATI 382
A + YL S VH D+ N L+ ++++ + DFG+++ + + R T+ I
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 383 EYGREGQV-----SPKSDVYGYGITLIETFTKKK 411
+ + + +SDV+ G+ L E FT K
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 27/223 (12%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDG--ALKSFDAECEVL 268
QE + + LIG G FG VY GR+ EVAI++ ++ D LK+F E
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAY 83
Query: 269 KSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
+ RH N+V + +C + A++ +L + + +LD+ + I ++ +
Sbjct: 84 RQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGM 143
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREG 388
YLH + ++H D+K NV D+ V ++DFG+ + ++ R + I+ G
Sbjct: 144 GYLH---AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLC 199
Query: 389 QVSPK-------------------SDVYGYGITLIETFTKKKP 412
++P+ SDV+ G E ++ P
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 223 KSLIGIGSFGTVYKGRF-LDGME---VAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG G FG V +GR G + VAIK + + + F +E ++ H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYS 336
++ +N ++ E+M NG+L+ L ++G + Q + ++ +A + YL Y
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY- 137
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL-------------LNGKESMRTQTLATIE 383
VH D+ N+L++ ++V +SDFG+++ L GK +R I
Sbjct: 138 ---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 384 YGREGQVSPKSDVYGYGITLIETFT 408
+ + + SD + YGI + E +
Sbjct: 195 FRK---FTSASDAWSYGIVMWEVMS 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 223 KSLIGIGSFGTVYKGRF-LDGME---VAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG G FG V +GR G + VAIK + + + F +E ++ H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYS 336
++ +N ++ E+M NG+L+ L ++G + Q + ++ +A + YL Y
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY- 139
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL-------------LNGKESMRTQTLATIE 383
VH D+ N+L++ ++V +SDFG+++ L GK +R I
Sbjct: 140 ---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 384 YGREGQVSPKSDVYGYGITLIETFT 408
+ + + SD + YGI + E +
Sbjct: 197 FRK---FTSASDAWSYGIVMWEVMS 218
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 13/189 (6%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVF-HLQFDGALKSFD-AECEVLKSVRHRNLVKIISS 282
IG GS+G V+K R D G VAIK F + D +K E +LK ++H NLV ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
LV EY + L + G+ + + SI A+ + H + +H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-SITWQTLQAVNFCH---KHNCIHR 126
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR------EGQVSPKSDV 396
D+KP N+L+ V L DFG A+LL G +AT Y + Q P DV
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDV 186
Query: 397 YGYGITLIE 405
+ G E
Sbjct: 187 WAIGCVFAE 195
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFH--LQFDGALK-SFDAECEVLKSVR 272
+D + ++G G V+ R L D +VA+KV L D + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 273 HRNLVKII----SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
H +V + + G +V+EY+ +L +++ G + + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIAD---AC 126
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI------ 382
+ L+F + N ++H D+KP+N+L+ + DFGIA+ + + QT A I
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 383 --EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
E R V +SDVY G L E T + P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHL-------QFDGALKSFDAECE 266
LA + + IG G FG V+KGR + D VAIK L + + F E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 267 VLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
++ ++ H N+VK+ N +V+E++ G L L + +L +M+D+AL
Sbjct: 76 IMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDD-----DMVAHLSDFGIAK--------LLNGKES 373
+EY+ + P+VH D++ N+ L + A ++DFG+++ LL +
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQW 192
Query: 374 MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCE 415
M +T+ E + K+D Y + + L T + P E
Sbjct: 193 MAPETIGA----EEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 5 GSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPT 64
G N L IP L + + +++G++P + +K +V ++ S N L+G +PP+
Sbjct: 85 GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Query: 65 IGGLTNLQLLSLENNRLQGPIPESFGELTSL-ESLDLSVNNLSGVIPISLEKLVYLKDLN 123
I L NL ++ + NR+ G IP+S+G + L S+ +S N L+G IP + L L ++
Sbjct: 145 ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVD 203
Query: 124 LSFNRLKGD 132
LS N L+GD
Sbjct: 204 LSRNMLEGD 212
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 25/157 (15%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENM-KVVVEINLSRNYLTGD 60
L N LS +P + +L +++ F N ++G++P + K+ + +SRN LTG
Sbjct: 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGE-----------------------LTSLES 97
IPPT L NL + L N L+G FG +L
Sbjct: 190 IPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNG 248
Query: 98 LDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134
LDL N + G +P L +L +L LN+SFN L G+IP
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 55 NYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLE 114
N L G IPP I LT L L + + + G IP+ ++ +L +LD S N LSG +P S+
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 115 KLVYLKDLNLSFNRLKGDIP 134
L L + NR+ G IP
Sbjct: 147 SLPNLVGITFDGNRISGAIP 166
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFH--LQFDGALK-SFDAECEVLKSVR 272
+D + ++G G V+ R L +VA+KV L D + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 273 HRNLVKIISS----CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
H +V + ++ G +V+EY+ +L +++ G + + + ++ D A
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIAD---AC 126
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI------ 382
+ L+F + N ++H D+KP+N+++ + DFGIA+ + + TQT A I
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 383 --EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
E R V +SDVY G L E T + P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFLDGME-----VAIKVFH-LQFDGALKSFDAECEV 267
+L ++G G+FGTVYKG ++ E VAIK+ + A F E +
Sbjct: 34 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 93
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ S+ H +LV+++ C + + LV + M +G L + ++ + L+ + +A
Sbjct: 94 MASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 152
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES----------MRTQ 377
+ YL +VH D+ NVL+ ++DFG+A+LL G E ++
Sbjct: 153 MMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM 209
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
L I Y + + +SDV+ YG+T+ E T
Sbjct: 210 ALECIHYRK---FTHQSDVWSYGVTIWELMT 237
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 223 KSLIGIGSFGTVYKGRF-LDGME---VAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLV 277
+ +IG G FG V G L G VAIK + + + F +E ++ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-HFGYS 336
+ + ++ E+M NGSL+ L ++G + Q + ++ +A ++YL Y
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY- 130
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL-------------LNGKESMRTQTLATIE 383
VH + N+L++ ++V +SDFG+++ L GK +R I+
Sbjct: 131 ---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 384 YGREGQVSPKSDVYGYGITLIETFT 408
Y + + SDV+ YGI + E +
Sbjct: 188 YRK---FTSASDVWSYGIVMWEVMS 209
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 224 SLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKII 280
L+G GS+G V K R D G VAIK F D + K E ++LK +RH NLV ++
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C LV E++ + L+ NG+ + Q+ I + + F +S+ +
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI-----INGIGFCHSHNI 145
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR------EGQVSPK 393
+H DIKP N+L+ V L DFG A+ L + +AT Y + +
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Query: 394 SDVYGYGITLIETF 407
DV+ G + E F
Sbjct: 206 VDVWAIGCLVTEMF 219
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFLDGME-----VAIKVFH-LQFDGALKSFDAECEV 267
+L ++G G+FGTVYKG ++ E VAIK+ + A F E +
Sbjct: 11 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALI 70
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ S+ H +LV+++ C + + LV + M +G L + ++ + L+ + +A
Sbjct: 71 MASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 129
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES----------MRTQ 377
+ YL +VH D+ NVL+ ++DFG+A+LL G E ++
Sbjct: 130 MMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM 186
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
L I Y + + +SDV+ YG+T+ E T
Sbjct: 187 ALECIHYRK---FTHQSDVWSYGVTIWELMT 214
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHL-------QFDGALKSFDAECE 266
LA + + IG G FG V+KGR + D VAIK L + + F E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 267 VLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
++ ++ H N+VK+ N +V+E++ G L L + +L +M+D+AL
Sbjct: 76 IMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDD-----DMVAHLSDFG--------IAKLLNGKES 373
+EY+ + P+VH D++ N+ L + A ++DFG ++ LL +
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQW 192
Query: 374 MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKP 412
M +T+ E + K+D Y + + L T + P
Sbjct: 193 MAPETIGA----EEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFH--LQFDGALK-SFDAECEVLKSVR 272
+D + ++G G V+ R L +VA+KV L D + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 273 HRNLVKII----SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
H +V + + G +V+EY+ +L +++ G + + + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIAD---AC 126
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI------ 382
+ L+F + N ++H D+KP+N+++ + DFGIA+ + + TQT A I
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 383 --EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
E R V +SDVY G L E T + P
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 223 KSLIGIGSFGTVYKGRFL-DG--MEVAIKVF-HLQFDGALKSFDAECEVL-KSVRHRNLV 277
+ +IG G+FG V K R DG M+ AIK + F E EVL K H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------------SSNGILDIFQRLSIMI 322
++ +C + + L +EY +G+L L S+ L Q L
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 323 DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLA-- 380
DVA ++YL +H D+ N+L+ ++ VA ++DFG+++ G+E +T+
Sbjct: 140 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 193
Query: 381 -----TIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLK 424
IE + SDV+ YG+ L E + P C + C E+ K
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 243
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 223 KSLIGIGSFGTVYKGRFL-DG--MEVAIKVF-HLQFDGALKSFDAECEVL-KSVRHRNLV 277
+ +IG G+FG V K R DG M+ AIK + F E EVL K H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------------SSNGILDIFQRLSIMI 322
++ +C + + L +EY +G+L L S+ L Q L
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 323 DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLA-- 380
DVA ++YL +H D+ N+L+ ++ VA ++DFG+++ G+E +T+
Sbjct: 150 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 203
Query: 381 -----TIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLK 424
IE + SDV+ YG+ L E + P C + C E+ K
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 253
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME---VAIKVFHLQFDGALKSF-DAECEVLKSVRHRN 275
F++ IG GSFG V+KG +D VAIK+ L+ E VL
Sbjct: 24 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
+ K S +++EY+ GS L G LD Q +I+ ++ L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH--- 136
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT-----IEYGREGQV 390
S +H DIK +NVLL + L+DFG+A L + R + T E ++
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 391 SPKSDVYGYGITLIETFTKKKPTCEI 416
K+D++ GIT IE + P E+
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME---VAIKVFHLQFDGALKSF-DAECEVLKSVRHRN 275
F++ IG GSFG V+KG +D VAIK+ L+ E VL
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
+ K S +++EY+ GS L G LD Q +I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH--- 121
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT-----IEYGREGQV 390
S +H DIK +NVLL + L+DFG+A L + R + T E ++
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 391 SPKSDVYGYGITLIETFTKKKPTCEI 416
K+D++ GIT IE + P E+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME---VAIKVFHLQFDGALKSF-DAECEVLKSVRHRN 275
F++ IG GSFG V+KG +D VAIK+ L+ E VL
Sbjct: 29 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
+ K S +++EY+ GS L G LD Q +I+ ++ L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH--- 141
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT-----IEYGREGQV 390
S +H DIK +NVLL + L+DFG+A L + R + T E ++
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 391 SPKSDVYGYGITLIETFTKKKPTCEI 416
K+D++ GIT IE + P E+
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSEL 227
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 26/231 (11%)
Query: 226 IGIGSFG-TVYKGRFLDGMEVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKIISS 282
IG GSFG + DG + IK ++ + + ++ E VL +++H N+V+ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIM---IDVALALEYLHFGYSNPV 339
+V++Y G L K + + G+L FQ I+ + + LAL+++H +
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDWFVQICLALKHVH---DRKI 146
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSP------- 392
+H DIK N+ L D L DFGIA++LN + + T Y +SP
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY-----LSPEICENKP 201
Query: 393 ---KSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVNDFLPISVMNVVD 440
KSD++ G L E T K + + LK F P+S+ D
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYD 252
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME---VAIKVFHLQFDGALKSF-DAECEVLKSVRHRN 275
F++ IG GSFG V+KG +D VAIK+ L+ E VL
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
+ K S +++EY+ GS L G LD Q +I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH--- 121
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT-----IEYGREGQV 390
S +H DIK +NVLL + L+DFG+A L + R + T E ++
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 391 SPKSDVYGYGITLIETFTKKKPTCEI 416
K+D++ GIT IE + P E+
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 220 FSEKSLIGIGSFGTVYKGR-FLDGMEVAIK---VFHLQFDGALKSFDAECEVLKSVRHRN 275
F + IG G F VY+ LDG+ VA+K +F L A E ++LK + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI---MIDVALALEYLH 332
++K +S N +VLE G L + + + ++ + + ALE++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSP 392
S V+H DIKP+NV + V L D G+ + + K + + T Y ++
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 210
Query: 393 -----KSDVYGYGITLIETFTKKKPTCEIFCEEMNL 423
KSD++ G L E + P + ++MNL
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNL 243
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 27/202 (13%)
Query: 225 LIGIGSFGTVYKGRFLDGME-----VAIKVFHLQFDGALKSFDAECE---VLKSVRHRNL 276
++G G FGTV+KG ++ E V IKV ++ +SF A + + S+ H ++
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKV--IEDKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
V+++ C + + LV +Y+ GSL + G L L+ + +A + YL
Sbjct: 96 VRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---E 151
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL----------NGKESMRTQTLATIEYGR 386
+ +VH ++ NVLL ++DFG+A LL K ++ L +I +G+
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 387 EGQVSPKSDVYGYGITLIETFT 408
+ +SDV+ YG+T+ E T
Sbjct: 212 ---YTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 224 SLIGIGSFGTVYKGRFLDGME-----VAIKVFHLQFDGALKSFDAECE---VLKSVRHRN 275
++G G FGTV+KG ++ E V IKV ++ +SF A + + S+ H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKV--IEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
+V+++ C + + LV +Y+ GSL + G L L+ + +A + YL
Sbjct: 77 IVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE--- 132
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL----------NGKESMRTQTLATIEYG 385
+ +VH ++ NVLL ++DFG+A LL K ++ L +I +G
Sbjct: 133 EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 192
Query: 386 REGQVSPKSDVYGYGITLIETFT 408
+ + +SDV+ YG+T+ E T
Sbjct: 193 K---YTHQSDVWSYGVTVWELMT 212
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
+G G+FG VYK + + + A KV + + L+ + E ++L S H N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
N +++E+ A G+++ + L Q + AL YLH N ++H D+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 345 KPSNVLLDDDMVAHLSDFGIA----KLLNGKESM------RTQTLATIEYGREGQVSPKS 394
K N+L D L+DFG++ + + ++S + E ++ K+
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 395 DVYGYGITLIETFTKKKPTCEI 416
DV+ GITLIE + P E+
Sbjct: 222 DVWSLGITLIEMAEIEPPHHEL 243
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285
+G G FG V+ G + + +VA+K ++++F E ++K+++H LV++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 286 GNFEALVLEYMANGSLEKCLYSSNGILDIFQRL-SIMIDVALALEYLHFGYSNPVVHCDI 344
++ E+MA GSL L S G + +L +A + Y+ +H D+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 135
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKE-SMRTQTLATIEYGRE-----GQVSPKSDVYG 398
+ +NVL+ + ++ ++DFG+A+++ E + R I++ G + KS+V+
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWS 195
Query: 399 YGITLIETFTKKK 411
+GI L E T K
Sbjct: 196 FGILLYEIVTYGK 208
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
+G G+FG VYK + + + A KV + + L+ + E ++L S H N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
N +++E+ A G+++ + L Q + AL YLH N ++H D+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 345 KPSNVLLDDDMVAHLSDFGIA----KLLNGKESM------RTQTLATIEYGREGQVSPKS 394
K N+L D L+DFG++ + + ++S + E ++ K+
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 395 DVYGYGITLIETFTKKKPTCEI 416
DV+ GITLIE + P E+
Sbjct: 222 DVWSLGITLIEMAEIEPPHHEL 243
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFH--LQFDGALK-SFDAECEVLKSVR 272
+D + ++G G V+ R L +VA+KV L D + F E + ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 273 HRNLVKII----SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
H +V + + G +V+EY+ +L +++ G + + + ++ D A
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIAD---AC 143
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI------ 382
+ L+F + N ++H D+KP+N+++ + DFGIA+ + + TQT A I
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 383 --EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
E R V +SDVY G L E T + P
Sbjct: 204 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
+G G+FG VYK + + + A KV + + L+ + E ++L S H N+VK++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
N +++E+ A G+++ + L Q + AL YLH N ++H D+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT----------IEYGREGQVSPKS 394
K N+L D L+DFG++ R + T E ++ K+
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 395 DVYGYGITLIETFTKKKPTCEI 416
DV+ GITLIE + P E+
Sbjct: 222 DVWSLGITLIEMAEIEPPHHEL 243
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQF-----DGALKSFDAECEVLKSVRH 273
+ + +G G F TVYK R + + VAIK L DG ++ E ++L+ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
N++ ++ + + + +LV ++M LE + ++ +L + M+ LEYLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPK 393
+ ++H D+KP+N+LLD++ V L+DFG+AK + T Y R ++
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWY-RAPELLFG 186
Query: 394 SDVYGYGITL 403
+ +YG G+ +
Sbjct: 187 ARMYGVGVDM 196
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVFHL---QFDGALKSFDAECEVLKSVRHRNLVKIIS 281
+G G TVY + ++VAIK + + + LK F+ E + H+N+V +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 282 SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVH 341
+ LV+EY+ +L + + S+G L + ++ + +++ H +VH
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAH---DMRIVH 134
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT---LATIEY----GREGQVSPK- 393
DIKP N+L+D + + DFGIAK L+ E+ TQT L T++Y +G+ + +
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALS--ETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 394 SDVYGYGITLIETFTKKKP 412
+D+Y GI L E + P
Sbjct: 193 TDIYSIGIVLYEMLVGEPP 211
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHL-------QFDGALKSFDAECE 266
LA + + IG G FG V+KGR + D VAIK L + + F E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 267 VLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
++ ++ H N+VK+ N +V+E++ G L L + +L +M+D+AL
Sbjct: 76 IMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDD-----DMVAHLSDFGIAK--------LLNGKES 373
+EY+ + P+VH D++ N+ L + A ++DF +++ LL +
Sbjct: 134 GIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQW 192
Query: 374 MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCE 415
M +T+ E + K+D Y + + L T + P E
Sbjct: 193 MAPETIGA----EEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ +++E+M G+L L N ++ L + ++ A+EYL
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 137
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 194
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 34/227 (14%)
Query: 223 KSLIGIGSFGTVYKGRFL-DG--MEVAIKVF-HLQFDGALKSFDAECEVL-KSVRHRNLV 277
+ +IG G+FG V K R DG M+ AIK + F E EVL K H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------------SSNGILDIFQRLSIMI 322
++ +C + + L +EY +G+L L S+ L Q L
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 323 DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLA-- 380
DVA ++YL +H ++ N+L+ ++ VA ++DFG+++ G+E +T+
Sbjct: 147 DVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 200
Query: 381 -----TIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEM 421
IE + SDV+ YG+ L E + P C + C E+
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 247
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ +++E+M G+L L N ++ L + ++ A+EYL
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 133
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK---F 190
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 191 SIKSDVWAFGVLLWEIAT 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKS 270
L+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALA 327
+ H N+VK++ N LV E++ + L+K + +S GI L + + +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL----- 116
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
L+ L F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RA 175
Query: 388 GQV-------SPKSDVYGYGITLIETFTKK 410
++ S D++ G E T++
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 116
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 175
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 226 IGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G FG VY R F+ ++V K L+ G E E+ +RH N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALEYLHFGYSNPV 339
+ L+LEY G + K L + + QR + I ++A AL Y H S V
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKLSKFDE--QRTATYITELANALSYCH---SKRV 134
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR----EGQV-SPKS 394
+H DIKP N+LL ++DFG + ++ S RT T++Y EG++ K
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 395 DVYGYGITLIETFTKKKP 412
D++ G+ E K P
Sbjct: 193 DLWSLGVLCYEFLVGKPP 210
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 116
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 175
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 116
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 175
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 115
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 174
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 115
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 174
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 224 SLIG-IGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIIS 281
+IG +G FG VYK + + + A KV + + L+ + E ++L S H N+VK++
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 282 SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVH 341
+ N +++E+ A G+++ + L Q + AL YLH N ++H
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIH 131
Query: 342 CDIKPSNVLLDDDMVAHLSDFGI-AKLLNGKESMRTQTLAT----------IEYGREGQV 390
D+K N+L D L+DFG+ AK R + T E ++
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 391 SPKSDVYGYGITLIETFTKKKPTCEI 416
K+DV+ GITLIE + P E+
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 225 LIGIGSFGTVYKGRFLDG----MEVAIK----VFHLQFDGALKSFDAECEVLKSVRHRNL 276
+IG G FG VY G ++D ++ AIK + +Q +++F E +++ + H N+
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ---QVEAFLREGLLMRGLNHPNV 84
Query: 277 VKIIS-SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
+ +I ++L YM +G L + + S + +S + VA +EYL
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---A 141
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT---------LATIEYGR 386
VH D+ N +LD+ ++DFG+A+ + +E Q +E +
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 387 EGQVSPKSDVYGYGITLIETFTKKKP 412
+ + KSDV+ +G+ L E T+ P
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 116
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 175
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 123
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 182
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 123
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 182
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
+G G+FG VYK + + G A KV + + L+ + E E+L + H +VK++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
+ +++E+ G+++ + + L Q I + LE L+F +S ++H D+
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 345 KPSNVLLDDDMVAHLSDFGIA----KLLNGKESM------RTQTLATIEYGREGQVSPKS 394
K NVL+ + L+DFG++ K L ++S + E ++ K+
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 195
Query: 395 DVYGYGITLIETFTKKKPTCEI 416
D++ GITLIE + P E+
Sbjct: 196 DIWSLGITLIEMAQIEPPHHEL 217
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G FG VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 16 KHKLGGGQFGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N + L + ++ A+EYL
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK---F 187
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 188 SIKSDVWAFGVLLWEIAT 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 122
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT+ T++Y
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEM 177
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 117
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 176
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N ++ L + ++ A+EYL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 132
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 189
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ +++E+M G+L L N + L + ++ A+EYL
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 189
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
+G G+FG VYK + + G A KV + + L+ + E E+L + H +VK++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
+ +++E+ G+++ + + L Q I + LE L+F +S ++H D+
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 345 KPSNVLLDDDMVAHLSDFGIA----KLLNGKESM------RTQTLATIEYGREGQVSPKS 394
K NVL+ + L+DFG++ K L ++S + E ++ K+
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 395 DVYGYGITLIETFTKKKPTCEI 416
D++ GITLIE + P E+
Sbjct: 204 DIWSLGITLIEMAQIEPPHHEL 225
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ +++E+M G+L L N + L + ++ A+EYL
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK---F 187
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 188 SIKSDVWAFGVLLWEIAT 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N ++ L + ++ A+EYL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 137
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 194
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ +++E+M G+L L N + L + ++ A+EYL
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 189
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 198 NMSPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG 256
+MSP +Y + + + K +G G +G VY+G + + VA+K L+ D
Sbjct: 2 HMSP-------NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDT 52
Query: 257 -ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDI 314
++ F E V+K ++H NLV+++ C+ ++ E+M G+L L N ++
Sbjct: 53 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 112
Query: 315 FQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---- 370
L + ++ A+EYL +H D+ N L+ ++ + ++DFG+++L+ G
Sbjct: 113 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
Query: 371 -----KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
K ++ ++ Y + S KSDV+ +G+ L E T
Sbjct: 170 APAGAKFPIKWTAPESLAYNK---FSIKSDVWAFGVLLWEIAT 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N ++ L + ++ A+EYL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 137
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK---F 194
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N ++ L + ++ A+EYL
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 133
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK---F 190
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 191 SIKSDVWAFGVLLWEIAT 208
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N ++ L + ++ A+EYL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 132
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 189
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N ++ L + ++ A+EYL
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 136
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 193
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 194 SIKSDVWAFGVLLWEIAT 211
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 31 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N ++ L + ++ A+EYL
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 145
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 202
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 203 SIKSDVWAFGVLLWEIAT 220
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 198 NMSPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG 256
+MSP +Y + + + K +G G +G VY+G + + VA+K L+ D
Sbjct: 2 HMSP-------NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDT 52
Query: 257 -ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDI 314
++ F E V+K ++H NLV+++ C+ ++ E+M G+L L N ++
Sbjct: 53 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA 112
Query: 315 FQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---- 370
L + ++ A+EYL +H D+ N L+ ++ + ++DFG+++L+ G
Sbjct: 113 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 169
Query: 371 -----KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
K ++ ++ Y + S KSDV+ +G+ L E T
Sbjct: 170 AHAGAKFPIKWTAPESLAYNK---FSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N ++ L + ++ A+EYL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 137
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 194
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N ++ L + ++ A+EYL
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 134
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 191
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 192 SIKSDVWAFGVLLWEIAT 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGR----- 386
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 387 EGQVSPKSDVYGYGITLIE 405
E S SD++ G + +
Sbjct: 208 EKSASKSSDLWALGCIIYQ 226
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 61
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 119
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 120 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V ++ A K E V
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYV 104
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 163
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 164 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 211
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 212 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 122
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 29/226 (12%)
Query: 198 NMSPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHL 252
+MS + W A + F +G G FG VY R F+ ++V K L
Sbjct: 3 HMSKKRQW----------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QL 51
Query: 253 QFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGIL 312
+ G E E+ +RH N++++ + L+LEY G++ + L +
Sbjct: 52 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 111
Query: 313 DIFQRLSIMI-DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
+ QR + I ++A AL Y H S V+H DIKP N+LL ++DFG + ++
Sbjct: 112 E--QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAP 164
Query: 372 ESMRTQTLATIEYGR----EGQV-SPKSDVYGYGITLIETFTKKKP 412
S RT T++Y EG++ K D++ G+ E K P
Sbjct: 165 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 127
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 128 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 180
Query: 392 PK 393
P+
Sbjct: 181 PE 182
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 68
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 126
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 181
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 122
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 63
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 121
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 122 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 176
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 122
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEM 177
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 122
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 177
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 124
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 125 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 177
Query: 392 PK 393
P+
Sbjct: 178 PE 179
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 125
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N + L + ++ A+EYL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 189
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 65
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 123
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 178
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 126
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 127 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 179
Query: 392 PK 393
P+
Sbjct: 180 PE 181
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 125
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 126 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 178
Query: 392 PK 393
P+
Sbjct: 179 PE 180
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N + L + ++ A+EYL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 189
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 226 IGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G FG VY R F+ ++V K L+ G E E+ +RH N++++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALEYLHFGYSNPV 339
+ L+LEY G++ + L + + QR + I ++A AL Y H S V
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALSYCH---SKRV 132
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR----EGQV-SPKS 394
+H DIKP N+LL ++DFG + ++ S RT T++Y EG++ K
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 395 DVYGYGITLIETFTKKKP 412
D++ G+ E K P
Sbjct: 191 DLWSLGVLCYEFLVGKPP 208
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 220 FSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHL--------QFDGALKSFDAECEVLKS 270
+ K +IG G V + G E A+K+ + Q + ++ E +L+
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 271 VR-HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
V H +++ +I S + +F LV + M G L L + + R SIM + A+
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR-SIMRSLLEAVS 214
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR 375
+LH +N +VH D+KP N+LLDD+M LSDFG + L E +R
Sbjct: 215 FLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR 257
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N + L + ++ A+EYL
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK---F 187
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 188 SIKSDVWAFGVLLWEIAT 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 216 ATDHFSEKSLIGIGSFGTVY-----KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY + +F+ ++V K L+ G E E+
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 90
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
+RH N++++ + L+LEY G++ + L + D + + + ++A AL Y
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 149
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR---- 386
H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 150 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMI 204
Query: 387 EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N + L + ++ A+EYL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 137
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 194
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY-----VS 203
Query: 392 PK 393
P+
Sbjct: 204 PE 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 69
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 127
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S RT T++Y
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 226 IGIGSFGTVY-----KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G FG VY + +F+ ++V K L+ G E E+ +RH N++++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 91
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ L+LEY G++ + L + D + + + ++A AL Y H S V+
Sbjct: 92 GYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVI 147
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR----EGQV-SPKSD 395
H DIKP N+LL ++DFG + ++ S RT T++Y EG++ K D
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 205
Query: 396 VYGYGITLIETFTKKKP 412
++ G+ E K P
Sbjct: 206 LWSLGVLCYEFLVGKPP 222
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 69
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G + K L + + QR + I ++A AL
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE--QRTATYITELANALS 127
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S R T++Y
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEM 182
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 202
Query: 392 PK 393
P+
Sbjct: 203 PE 204
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY-----VS 199
Query: 392 PK 393
P+
Sbjct: 200 PE 201
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 199
Query: 392 PK 393
P+
Sbjct: 200 PE 201
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 203
Query: 392 PK 393
P+
Sbjct: 204 PE 205
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 152
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 153 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 205
Query: 392 PK 393
P+
Sbjct: 206 PE 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 202
Query: 392 PK 393
P+
Sbjct: 203 PE 204
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 202
Query: 392 PK 393
P+
Sbjct: 203 PE 204
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 200
Query: 392 PK 393
P+
Sbjct: 201 PE 202
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 131
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 132 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 184
Query: 392 PK 393
P+
Sbjct: 185 PE 186
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 200
Query: 392 PK 393
P+
Sbjct: 201 PE 202
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY-----VS 200
Query: 392 PK 393
P+
Sbjct: 201 PE 202
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 202
Query: 392 PK 393
P+
Sbjct: 203 PE 204
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 46/223 (20%)
Query: 226 IGIGSFGTVYKGR------FLDGMEVAIKVFHLQFDGALKS-FDAECEVLKSVRHRNLVK 278
IG G+FG V++ R + VA+K+ + +++ F E ++ + N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCL---------------------YSSNG--ILDIF 315
++ C+ G L+ EYMA G L + L SS G L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 316 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
++L I VA + YL VH D+ N L+ ++MV ++DFG+++ +
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 369 ---NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
N +R +I Y R + +SDV+ YG+ L E F+
Sbjct: 232 ADGNDAIPIRWMPPESIFYNR---YTTESDVWAYGVVLWEIFS 271
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 32/212 (15%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL------ 328
N+VK++ N LV E++ L F S + + L L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQD------------LKTFMDASALTGIPLPLIKSYLF 109
Query: 329 ---EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYG 385
+ L F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY- 168
Query: 386 REGQV-------SPKSDVYGYGITLIETFTKK 410
R ++ S D++ G E T++
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 226 IGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G FG VY R F+ ++V K L+ G E E+ +RH N++++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALEYLHFGYSNPV 339
+ L+LEY G++ + L + + QR + I ++A AL Y H S V
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALSYCH---SKRV 134
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY----GREGQV-SPKS 394
+H DIKP N+LL ++DFG + ++ S RT T++Y EG+ K
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 395 DVYGYGITLIETFTKKKP 412
D++ G+ E K P
Sbjct: 193 DLWSLGVLCYEFLVGKPP 210
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALE 329
H N+VK++ N LV E++ + L+K + +S GI L + + + L+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQ 114
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R +
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPE 173
Query: 390 V-------SPKSDVYGYGITLIETFTKK 410
+ S D++ G E T++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 202
Query: 392 PK 393
P+
Sbjct: 203 PE 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 115
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R ++
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPEIL 174
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALE 329
H N+VK++ N LV E++ + L+K + +S GI L + + + L+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQ 117
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R +
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPE 176
Query: 390 V-------SPKSDVYGYGITLIETFTKK 410
+ S D++ G E T++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALE 329
H N+VK++ N LV E++ + L+K + +S GI L + + + L+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQ 116
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R +
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPE 175
Query: 390 V-------SPKSDVYGYGITLIETFTKK 410
+ S D++ G E T++
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+++ M G L + + L+ + +A
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 180
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+++ M G L + + L+ + +A
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 181
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+++ M G L + + L+ + +A
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 131 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 178
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALE 329
H N+VK++ N LV E++ + L+K + +S GI L + + + L+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQ 114
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R +
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPE 173
Query: 390 V-------SPKSDVYGYGITLIETFTKK 410
+ S D++ G E T++
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 116
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R ++
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPEIL 175
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+ L + +G + E +LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 116
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 175
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+ L + +G + E +LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 115
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ T + T+ Y R ++
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY-RAPEIL 174
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALE 329
H N+VK++ N LV E++ + L+K + +S GI L + + + L+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQ 115
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R +
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPE 174
Query: 390 V-------SPKSDVYGYGITLIETFTKK 410
+ S D++ G E T++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALE 329
H N+VK++ N LV E++ + L+K + +S GI L + + + L+
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQ 118
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R +
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPE 177
Query: 390 V-------SPKSDVYGYGITLIETFTKK 410
+ S D++ G E T++
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+++ M G L + + L+ + +A
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 179
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALE 329
H N+VK++ N LV E++ + L+K + +S GI L + + + L+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQ 117
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R +
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPE 176
Query: 390 V-------SPKSDVYGYGITLIETFTKK 410
+ S D++ G E T++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 115
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R ++
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPEIL 174
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+++ M G L + + L+ + +A
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 131 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 178
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+++ M G L + + L+ + +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 177
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 118
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R ++
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPEIL 177
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 103/212 (48%), Gaps = 20/212 (9%)
Query: 209 SYQELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECE 266
+Y + + + K +G G +G VY+G + + VA+K L+ D ++ F E
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAA 265
Query: 267 VLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVA 325
V+K ++H NLV+++ C+ ++ E+M G+L L N ++ L + ++
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 326 LALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRT 376
A+EYL +H ++ N L+ ++ + ++DFG+++L+ G K ++
Sbjct: 326 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 382
Query: 377 QTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
++ Y + S KSDV+ +G+ L E T
Sbjct: 383 TAPESLAYNK---FSIKSDVWAFGVLLWEIAT 411
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 116
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R ++
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPEIL 175
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFL---DGMEVAIKVFHLQFDGA-LKSFDAECEVLKSVRHRNLVKIIS 281
+G G+FG+V +G + ++VAIKV + A + E +++ + + +V++I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 282 SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVH 341
C LV+E G L K L + + ++ V++ ++YL VH
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVH 133
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT----IEYGRE----GQVSPK 393
D+ NVLL + A +SDFG++K L +S T A Y E + S +
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 394 SDVYGYGITLIETFT 408
SDV+ YG+T+ E +
Sbjct: 194 SDVWSYGVTMWEALS 208
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 118
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R ++
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPEIL 177
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALE 329
H N+VK++ N LV E++ + L+K + +S GI L + + + L+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQ 115
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R +
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPE 174
Query: 390 V-------SPKSDVYGYGITLIETFTKK 410
+ S D++ G E T++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALE 329
H N+VK++ N LV E+++ L+K + +S GI L + + + L+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQL-----LQ 117
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R +
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPE 176
Query: 390 V-------SPKSDVYGYGITLIETFTKK 410
+ S D++ G E T++
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 213 LLLATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV 271
L A+D F E +++G G+FG V K R LD AIK + L + +E +L S+
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 272 RH-------------RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSN--GILDIFQ 316
H RN VK +++ + + +EY NG+L ++S N D +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 317 RLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
RL I LE L + +S ++H D+KP N+ +D+ + DFG+AK
Sbjct: 120 RLFRQI-----LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALE 329
H N+VK++ N LV E+++ L+K + +S GI L + + + L+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQL-----LQ 115
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R +
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPE 174
Query: 390 V-------SPKSDVYGYGITLIETFTKK 410
+ S D++ G E T++
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 117
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R ++
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPEIL 176
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 219 HFSEKSLIGIGSFGTVYKGRF---LDGMEVAIKVFHLQFDGA--LKSFDAECEVLKSVRH 273
H S +G G+FG+V R+ D + V LQ G + F E ++LK++
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 67
Query: 274 RNLVKIIS-SCSNGNFE-ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
+VK S G E LV+EY+ +G L L LD + L + +EYL
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL---NGKESMRTQTLATI-EYGRE 387
S VH D+ N+L++ + ++DFG+AKLL +R + I Y E
Sbjct: 128 G---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 388 GQ----VSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVND 429
S +SDV+ +G+ L E FT +C E + + D
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 230
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
Query: 224 SLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIIS 281
L+G G++G VYKGR + G AIKV + D + E +LK HRN+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIATYYG 88
Query: 282 SCSNGNFEA------LVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYLHFG 334
+ N LV+E+ GS+ + ++ G L I ++ L +LH
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH-- 146
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT----------IEY 384
+ V+H DIK NVLL ++ L DFG++ L+ R + T +
Sbjct: 147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 205
Query: 385 GREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416
+ KSD++ GIT IE P C++
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY+G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ ++ E+M G+L L N ++ L + ++ A+EYL
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNF 378
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H ++ N L+ ++ + ++DFG+++L+ G K ++ ++ Y +
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK---F 435
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 436 SIKSDVWAFGVLLWEIAT 453
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 36/257 (14%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 180
Query: 388 GQVSP----------------KSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVNDF 430
G P +SDV+ YG+T+ E T KP I E++ +
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 240
Query: 431 LPISVMNVVDTSLLRRE 447
LP + +D ++ R+
Sbjct: 241 LPQPPICTIDVYMIMRK 257
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGMEV-AIKVFHLQFDGALKSF-DAECEVLKSVRHRNLV 277
F++ IG GSFG VYKG EV AIK+ L+ E VL +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ S +++EY+ GS L G L+ +I+ ++ L+YLH S
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLH---SE 135
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT-----IEYGREGQVSP 392
+H DIK +NVLL + L+DFG+A L + R + T E ++
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF 195
Query: 393 KSDVYGYGITLIETFTKKKPTCEI 416
K+D++ GIT IE + P ++
Sbjct: 196 KADIWSLGITAIELAKGEPPNSDL 219
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGI-LDIFQRLSIMIDVALALEYL 331
N+VK++ N LV E++ + L+K + +S GI L + + + L+ L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQL-----LQGL 119
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y R ++
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY-RAPEIL 178
Query: 391 ------SPKSDVYGYGITLIETFTKK 410
S D++ G E T++
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF TV R L E AIK+ H+ + + E +V+ + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + L Y NG L K + + R ++ ALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 154
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 155 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 207
Query: 392 PK 393
P+
Sbjct: 208 PE 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 242 GMEVAIKVFHLQFDGALKS-FDAECEVLKSVRHRNLVKIISSCSNGNFEA--LVLEYMAN 298
G VA+K L+S + E E+L+++ H ++VK C + ++ LV+EY+
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 299 GSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAH 358
GSL Y + + Q L + + YLH + +H + NVLLD+D +
Sbjct: 97 GSLRD--YLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVK 151
Query: 359 LSDFGIAKLL-NGKESMRTQT-------LATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ DFG+AK + G E R + E +E + SDV+ +G+TL E T
Sbjct: 152 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 226 IGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G FG VY R F+ ++V K L+ G E E+ +RH N++++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALEYLHFGYSNPV 339
+ L+LEY G++ + L + + QR + I ++A AL Y H S V
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALSYCH---SKRV 130
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR----EGQV-SPKS 394
+H DIKP N+LL ++DFG + + S RT T++Y EG++ K
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKV 188
Query: 395 DVYGYGITLIETFTKKKP 412
D++ G+ E K P
Sbjct: 189 DLWSLGVLCYEFLVGKPP 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 122
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S R T++Y
Sbjct: 123 YCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 36/257 (14%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+++ M G L + + L+ + +A
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG AKLL +E EY E
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---------EYHAE 179
Query: 388 GQVSP----------------KSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVNDF 430
G P +SDV+ YG+T+ E T KP I E++ +
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 239
Query: 431 LPISVMNVVDTSLLRRE 447
LP + +D ++ R+
Sbjct: 240 LPQPPICTIDVYMIMRK 256
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 125
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL +++FG + ++ S RT T++Y
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKII 280
K +G G +G VY G + + VA+K L+ D ++ F E V+K ++H NLV+++
Sbjct: 37 KHKLGGGQYGEVYVGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPV 339
C+ +V EYM G+L L N + L + ++ A+EYL
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNF 151
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQTLATIEYGREGQV 390
+H D+ N L+ ++ V ++DFG+++L+ G K ++ ++ Y
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NTF 208
Query: 391 SPKSDVYGYGITLIETFT 408
S KSDV+ +G+ L E T
Sbjct: 209 SIKSDVWAFGVLLWEIAT 226
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 242 GMEVAIKVFHLQFDGALKS-FDAECEVLKSVRHRNLVKIISSCSNGNFEA--LVLEYMAN 298
G VA+K L+S + E E+L+++ H ++VK C + ++ LV+EY+
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 299 GSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAH 358
GSL Y + + Q L + + YLH + +H + NVLLD+D +
Sbjct: 98 GSLRD--YLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVK 152
Query: 359 LSDFGIAKLL-NGKESMRTQT-------LATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ DFG+AK + G E R + E +E + SDV+ +G+TL E T
Sbjct: 153 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 36/257 (14%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 177
Query: 388 GQVSP----------------KSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVNDF 430
G P +SDV+ YG+T+ E T KP I E++ +
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 237
Query: 431 LPISVMNVVDTSLLRRE 447
LP + +D ++ R+
Sbjct: 238 LPQPPICTIDVYMIMRK 254
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 36/257 (14%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 80
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 139
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 140 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 187
Query: 388 GQVSP----------------KSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVNDF 430
G P +SDV+ YG+T+ E T KP I E++ +
Sbjct: 188 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 247
Query: 431 LPISVMNVVDTSLLRRE 447
LP + +D ++ R+
Sbjct: 248 LPQPPICTIDVYMIMRK 264
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 218 DHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHR 274
++F + IG G++G VYK R L G VA+K L + +G + E +LK + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL------ 328
N+VK++ N LV E++ L F S + + L L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQD------------LKTFMDASALTGIPLPLIKSYLF 113
Query: 329 ---EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYG 385
+ L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+ Y
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWY- 172
Query: 386 REGQV-------SPKSDVYGYGITLIETFTKK 410
R ++ S D++ G E T++
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 122
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S R T++Y
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 92/218 (42%), Gaps = 39/218 (17%)
Query: 225 LIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKS--VRHRNLVKIISS 282
LIG G +G VYKG LD VA+KVF ++F E + + + H N+ + I
Sbjct: 20 LIGRGRYGAVYKGS-LDERPVAVKVFSF---ANRQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 283 ----CSNGNFEAL-VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF---- 333
++G E L V+EY NGSL K Y S D + V L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXK--YLSLHTSDWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 334 --GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT--------QTLATIE 383
Y + H D+ NVL+ +D +SDFG++ L G +R + TI
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 384 YGR----EGQVSPKS--------DVYGYGITLIETFTK 409
Y EG V+ + D+Y G+ E F +
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 226 IGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G FG VY R F+ ++V K L+ G E E+ +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKT-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALEYLHFGYSNPV 339
+ L+LEY G++ + L + + QR + I ++A AL Y H S V
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSRFDE--QRTATYITELANALSYCH---SKRV 133
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
+H DIKP N+LL + ++DFG + ++ S RT T++Y
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDY 176
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 210 YQELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG-ALKSFDAECEV 267
Y + + + K +G G +G VY+G + + VA+K L+ D ++ F E V
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEEFLKEAAV 269
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-LDIFQRLSIMIDVAL 326
+K ++H NLV+++ C+ ++ E+M G+L L N + L + ++
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG---------KESMRTQ 377
A+EYL +H ++ N L+ ++ + ++DFG+++L+ G K ++
Sbjct: 330 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 386
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
++ Y + S KSDV+ +G+ L E T
Sbjct: 387 APESLAYNK---FSIKSDVWAFGVLLWEIAT 414
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 226 IGIGSFGTVYKGRFL---DGMEVAIKVFHLQFDGALK---SFDAECEVLKSVRHRNLVKI 279
+G G FG V + DG + V L+ D + + E ++L+++ H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 280 ISSCSNGNFEAL--VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
C + +L V+EY+ GSL Y + + Q L + + YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---AQ 153
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQT-------LATIEYGREGQ 389
+H D+ NVLLD+D + + DFG+AK + G E R + E +E +
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYK 213
Query: 390 VSPKSDVYGYGITLIETFT 408
SDV+ +G+TL E T
Sbjct: 214 FYYASDVWSFGVTLYELLT 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVF---HLQFDGALKSFDAECEVLKSVRH 273
+ F ++G GSF T R L E AIK+ H+ + + E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
VK+ + + L Y NG L K + + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN--GKESMRTQTLATIEYGREGQVS 391
++H D+KP N+LL++DM ++DFG AK+L+ K++ + T +Y VS
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY-----VS 200
Query: 392 PK 393
P+
Sbjct: 201 PE 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 64
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 122
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S R T++Y
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 177
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 66
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 124
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S R T++Y
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 179
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 125
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S R T++Y
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 180
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 125
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S R T++Y
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 180
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 67
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 125
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S R T++Y
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 180
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 66
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 124
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL +++FG + ++ S RT T++Y
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 179
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 180
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 179
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 180
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 10/204 (4%)
Query: 215 LATDHFSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGALK-SFDAECEVLKSVR 272
L D F + S +G G+ G V+K G+ +A K+ HL+ A++ E +VL
Sbjct: 6 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 65
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD-IFQRLSIMIDVALALEYL 331
+V + + ++ +E+M GSL++ L + I + I ++SI V L YL
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYL 123
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL---NGKESMRTQTLATIEYGREG 388
+ ++H D+KPSN+L++ L DFG++ L E + T++ + E +
Sbjct: 124 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGT 181
Query: 389 QVSPKSDVYGYGITLIETFTKKKP 412
S +SD++ G++L+E + P
Sbjct: 182 HYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 123
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 124 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 171
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 172 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 184
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 216 ATDHFSEKSLIGIGSFGTVY-----KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY + +F+ ++V K L+ G E E+
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 90
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
+RH N++++ + L+LEY G++ + L + D + + + ++A AL Y
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSY 149
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR---- 386
H S V+H DIKP N+LL ++DFG + ++ S R T++Y
Sbjct: 150 CH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMI 204
Query: 387 EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 177
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 177
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 95
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 154
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 155 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 202
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+++ M G L + + L+ + +A
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG AKLL +E EY E
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---------EYHAE 181
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 76
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 135
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 136 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 183
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 184 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLK 269
D F +G G FG VY R F+ ++V K L+ +G E E+
Sbjct: 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKS-QLEKEGVEHQLRREIEIQS 69
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
+RH N++++ + + L+LE+ G L K L +G D + + M ++A AL
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALH 128
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
Y H V+H DIKP N+L+ ++DFG + ++ R T++Y
Sbjct: 129 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDY 178
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLK 269
D F +G G FG VY R F+ ++V K L+ +G E E+
Sbjct: 12 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKS-QLEKEGVEHQLRREIEIQS 70
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
+RH N++++ + + L+LE+ G L K L +G D + + M ++A AL
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALH 129
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
Y H V+H DIKP N+L+ ++DFG + ++ R T++Y
Sbjct: 130 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDY 179
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 67
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEG 126
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 127 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 174
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 175 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKS 270
A + F +G G FG VY R F+ ++V K L+ G E E+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSH 65
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALE 329
+RH N++++ + L+LEY G++ + L + + QR + I ++A AL
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITELANALS 123
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR--- 386
Y H S V+H DIKP N+LL ++DFG + ++ S R T++Y
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEM 178
Query: 387 -EGQV-SPKSDVYGYGITLIETFTKKKP 412
EG++ K D++ G+ E K P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+++ M G L + + L+ + +A
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG AKLL +E EY E
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---------EYHAE 179
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 210 YQELLLATDHFSEKSLIGIGSFGTV-YKGRFLDGMEVAIKVFHLQFDGA-LKSFDAECEV 267
Y ELL ++ IG G F V L G VAIK+ G+ L E E
Sbjct: 5 YDELL---KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEA 61
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
LK++RH+++ ++ N +VLEY G L + S + + + R+ + + A
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSA 120
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT-LATIEYGR 386
+ Y+H S H D+KP N+L D+ L DFG+ G + QT ++ Y
Sbjct: 121 VAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAA 177
Query: 387 EGQVSPKS------DVYGYGITL 403
+ KS DV+ GI L
Sbjct: 178 PELIQGKSYLGSEADVWSMGILL 200
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFL--DGMEVAIKVFHLQFD----GALKSFDAE 264
+++L+ F+ ++G G FG+V + + DG V + V L+ D ++ F E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 265 CEVLKSVRHRNLVKIIS----SCSNGNFE--ALVLEYMANGSLEKCLYSS-------NGI 311
+K H ++ K++ S + G ++L +M +G L L +S N
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 312 LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
L R M+D+A +EYL S +H D+ N +L +DM ++DFG+++ +
Sbjct: 136 LQTLVRF--MVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 372 ESMRTQTLA-------TIEYGREGQVSPKSDVYGYGITLIETFTKKK 411
+ R + +E + + SDV+ +G+T+ E T+ +
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 219 HFSEKSLIGIGSFGTVYKGRF---LDGMEVAIKVFHLQFDGA--LKSFDAECEVLKSVRH 273
H S +G G+FG+V R+ D + V LQ G + F E ++LK++
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 71
Query: 274 RNLVKI--ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
+VK +S LV+EY+ +G L L LD + L + +EYL
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 131
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES---MRTQTLATI-EYGRE 387
S VH D+ N+L++ + ++DFG+AKLL + +R + I Y E
Sbjct: 132 G---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 188
Query: 388 GQ----VSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVND 429
S +SDV+ +G+ L E FT +C E + + D
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 234
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL---- 328
H N+VK++ N LV E+++ L F S + + L L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMD------------LKDFMDASALTGIPLPLIKSY 111
Query: 329 -----EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
+ L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 384 YGREGQV-------SPKSDVYGYGITLIETFTKK 410
Y R ++ S D++ G E T++
Sbjct: 172 Y-RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 18/231 (7%)
Query: 219 HFSEKSLIGIGSFGTVYKGRF---LDGMEVAIKVFHLQFDGA--LKSFDAECEVLKSVRH 273
H S +G G+FG+V R+ D + V LQ G + F E ++LK++
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 83
Query: 274 RNLVKI--ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
+VK +S LV+EY+ +G L L LD + L + +EYL
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 143
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES---MRTQTLATI-EYGRE 387
S VH D+ N+L++ + ++DFG+AKLL + +R + I Y E
Sbjct: 144 G---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200
Query: 388 GQ----VSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVNDFLPIS 434
S +SDV+ +G+ L E FT +C E + + D +S
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS 251
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 47/221 (21%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQFDGALKSFDA-----ECEVLK 269
HF ++G GSFG V+ R + G A+KV LK D E ++L
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLK---KATLKVRDRVRTKMERDILA 85
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS---------- 319
V H +VK+ + L+L+++ G D+F RLS
Sbjct: 86 DVNHPFVVKLHYAFQTEGKLYLILDFLRGG-------------DLFTRLSKEVMFTEEDV 132
Query: 320 --IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ 377
+ ++AL L++LH S +++ D+KP N+LLD++ L+DFG++K E
Sbjct: 133 KFYLAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS 189
Query: 378 TLATIEY------GREGQVSPKSDVYGYGITLIETFTKKKP 412
T+EY R+G S +D + YG+ + E T P
Sbjct: 190 FCGTVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGSLP 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 215 LATDHFSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGALK-SFDAECEVLKSVR 272
L D F + S +G G+ G V+K G+ +A K+ HL+ A++ E +VL
Sbjct: 65 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 124
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD-IFQRLSIMIDVALALEYL 331
+V + + ++ +E+M GSL++ L + I + I ++SI V L YL
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYL 182
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
+ ++H D+KPSN+L++ L DFG++ L +SM + T Y ++
Sbjct: 183 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQ 238
Query: 391 ----SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL 423
S +SD++ G++L+E + P +E+ L
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 275
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 219 HFSEKSLIGIGSFGTVYKGRF---LDGMEVAIKVFHLQFDGA--LKSFDAECEVLKSVRH 273
H S +G G+FG+V R+ D + V LQ G + F E ++LK++
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 70
Query: 274 RNLVKI--ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
+VK +S LV+EY+ +G L L LD + L + +EYL
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 130
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES---MRTQTLATI-EYGRE 387
S VH D+ N+L++ + ++DFG+AKLL + +R + I Y E
Sbjct: 131 G---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 187
Query: 388 GQ----VSPKSDVYGYGITLIETFTKKKPTC 414
S +SDV+ +G+ L E FT +C
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 218
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL---- 328
H N+VK++ N LV E++ L F S + + L L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD------------LKDFMDASALTGIPLPLIKSY 108
Query: 329 -----EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
+ L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 384 YGREGQV-------SPKSDVYGYGITLIETFTKK 410
Y R ++ S D++ G E T++
Sbjct: 169 Y-RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVR 272
+ ++F + IG G++G VYK R L G VA+K L + +G + E +LK +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL---- 328
H N+VK++ N LV E+++ L F S + + L L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMD------------LKDFMDASALTGIPLPLIKSY 110
Query: 329 -----EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
+ L F +S+ V+H D+KP N+L++ + L+DFG+A+ + T+
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 384 YGREGQV-------SPKSDVYGYGITLIETFTKK 410
Y R ++ S D++ G E T++
Sbjct: 171 Y-RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLK 269
D F +G G FG VY R F+ ++V K L+ +G E E+
Sbjct: 11 FTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKS-QLEKEGVEHQLRREIEIQS 69
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
+RH N++++ + + L+LE+ G L K L +G D + + M ++A AL
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALH 128
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
Y H V+H DIKP N+L+ ++DFG + ++ R T++Y
Sbjct: 129 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDY 178
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 7/162 (4%)
Query: 226 IGIGSFGTVYKGRFLDGME-VAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISS 282
IG G++GTV+K + + E VA+K L D G S E +LK ++H+N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
+ LV E+ + L+K S NG LD S + + L+ L F +S V+H
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQL---LKGLGFCHSRNVLHR 125
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
D+KP N+L++ + L+DFG+A+ + + T+ Y
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWY 167
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 36/257 (14%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG AKLL +E EY E
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---------EYHAE 179
Query: 388 GQVSP----------------KSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVNDF 430
G P +SDV+ YG+T+ E T KP I E++ +
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 239
Query: 431 LPISVMNVVDTSLLRRE 447
LP + +D ++ R+
Sbjct: 240 LPQPPICTIDVYMIMRK 256
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G VYK + G VA+K L + +G + E +LK + H N+V +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ LV E+M L+K L + L Q I I + L + + + ++H D
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR------EGQVSPKSDVY 397
+KP N+L++ D L+DFG+A+ T + T+ Y + S D++
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Query: 398 GYGITLIETFTKK 410
G E T K
Sbjct: 205 SIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHL--QFDGALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G VYK + G VA+K L + +G + E +LK + H N+V +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ LV E+M L+K L + L Q I I + L + + + ++H D
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR------EGQVSPKSDVY 397
+KP N+L++ D L+DFG+A+ T + T+ Y + S D++
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Query: 398 GYGITLIETFTKK 410
G E T K
Sbjct: 205 SIGCIFAEMITGK 217
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 226 IGIGSFGTVYKGRFL---DGMEVAIKVFHLQFDGA-LKSFDAECEVLKSVRHRNLVKIIS 281
+G G+FG+V +G + ++VAIKV + A + E +++ + + +V++I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 282 SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVH 341
C LV+E G L K L + + ++ V++ ++YL VH
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVH 459
Query: 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLAT----IEYGRE----GQVSPK 393
++ NVLL + A +SDFG++K L +S T A Y E + S +
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 394 SDVYGYGITLIETFT 408
SDV+ YG+T+ E +
Sbjct: 520 SDVWSYGVTMWEALS 534
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++ G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+++ M G L + + L+ + +A
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 184
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 224 SLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKIISS 282
++G G FG K + EV + ++FD ++F E +V++ + H N++K I
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
+ EY+ G+L + S + QR+S D+A + YLH S ++H
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHR 132
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLL 368
D+ N L+ ++ ++DFG+A+L+
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLM 158
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 10/215 (4%)
Query: 215 LATDHFSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGALK-SFDAECEVLKSVR 272
L D F + S +G G+ G V+K G+ +A K+ HL+ A++ E +VL
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD-IFQRLSIMIDVALALEYL 331
+V + + ++ +E+M GSL++ L + I + I ++SI V L YL
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL---NGKESMRTQTLATIEYGREG 388
+ ++H D+KPSN+L++ L DFG++ L + T++ + E +
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
Query: 389 QVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL 423
S +SD++ G++L+E + P +E+ L
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 215 LATDHFSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGALK-SFDAECEVLKSVR 272
L D F + S +G G+ G V+K G+ +A K+ HL+ A++ E +VL
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD-IFQRLSIMIDVALALEYL 331
+V + + ++ +E+M GSL++ L + I + I ++SI V L YL
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
+ ++H D+KPSN+L++ L DFG++ L +SM + T Y ++
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQ 176
Query: 391 ----SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL 423
S +SD++ G++L+E + P +E+ L
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 215 LATDHFSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGALK-SFDAECEVLKSVR 272
L D F + S +G G+ G V+K G+ +A K+ HL+ A++ E +VL
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD-IFQRLSIMIDVALALEYL 331
+V + + ++ +E+M GSL++ L + I + I ++SI V L YL
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
+ ++H D+KPSN+L++ L DFG++ L +SM + T Y ++
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQ 176
Query: 391 ----SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL 423
S +SD++ G++L+E + P +E+ L
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 14/217 (6%)
Query: 215 LATDHFSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGALK-SFDAECEVLKSVR 272
L D F + S +G G+ G V+K G+ +A K+ HL+ A++ E +VL
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD-IFQRLSIMIDVALALEYL 331
+V + + ++ +E+M GSL++ L + I + I ++SI V L YL
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
+ ++H D+KPSN+L++ L DFG++ L +SM + T Y ++
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQ 176
Query: 391 ----SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL 423
S +SD++ G++L+E + P +E+ L
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG G++G VYK + G A+K L+ + G + E +LK ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
LV E++ + L+K L G L+ S ++ + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
+KP N+L++ + ++DFG+A+ T + T+ Y
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWY 166
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
F E LIG G FG V+K + +DG IK + A + E + L + H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVH 68
Query: 279 IISSCSNG-NFEALVLEYMANGSLEKCLY-----SSNGILD--IFQRLSIMIDVALALE- 329
+ C +G +++ ++ S KCL+ G L+ I +R +D LALE
Sbjct: 69 Y-NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 330 ---------YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLA 380
Y+H S +++ D+KPSN+ L D + DFG+ L + R ++
Sbjct: 128 FEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN-DGKRXRSKG 183
Query: 381 TIEYGREGQVSPKS-----DVYGYGITLIE 405
T+ Y Q+S + D+Y G+ L E
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAE 213
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG AKLL +E EY E
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---------EYHAE 177
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++G G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG AKLL +E EY E
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---------EYHAE 184
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 242 GMEVAIKVFHLQFDGALKS-FDAECEVLKSVRHRNLVKIISSCSNGNFEAL--VLEYMAN 298
G VA+K +S + E ++L+++ H +++K C + ++L V+EY+
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 299 GSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAH 358
GSL Y + + Q L + + YLH S +H ++ NVLLD+D +
Sbjct: 103 GSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVK 157
Query: 359 LSDFGIAKLL-NGKESMRTQT-------LATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ DFG+AK + G E R + E +E + SDV+ +G+TL E T
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 10/215 (4%)
Query: 215 LATDHFSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGALK-SFDAECEVLKSVR 272
L D F + S +G G+ G V+K G+ +A K+ HL+ A++ E +VL
Sbjct: 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 89
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD-IFQRLSIMIDVALALEYL 331
+V + + ++ +E+M GSL++ L + I + I ++SI V L YL
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYL 147
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA-KLLNGKES--MRTQTLATIEYGREG 388
+ ++H D+KPSN+L++ L DFG++ +L++ + + T++ + E +
Sbjct: 148 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 205
Query: 389 QVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL 423
S +SD++ G++L+E + P +E+ L
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 240
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG G++G VYK + G A+K L+ + G + E +LK ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
LV E++ + L+K L G L+ S ++ + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
+KP N+L++ + ++DFG+A+ T + T+ Y
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWY 166
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 103/204 (50%), Gaps = 10/204 (4%)
Query: 215 LATDHFSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGALK-SFDAECEVLKSVR 272
L D F + S +G G+ G V+K G+ +A K+ HL+ A++ E +VL
Sbjct: 3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 62
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD-IFQRLSIMIDVALALEYL 331
+V + + ++ +E+M GSL++ L + I + I ++SI V L YL
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYL 120
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA-KLLNGKES--MRTQTLATIEYGREG 388
+ ++H D+KPSN+L++ L DFG++ +L++ + + T++ + E +
Sbjct: 121 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 178
Query: 389 QVSPKSDVYGYGITLIETFTKKKP 412
S +SD++ G++L+E + P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 29/279 (10%)
Query: 183 TRYRKGNTELSNIEVNMSPQAMWRRFSYQE----LLLATDHFSEKSL------IGIGSFG 232
R R+ N SPQ +R S+++ L L D +S IG GS G
Sbjct: 106 ARARQENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTG 165
Query: 233 TVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291
V G VA+K L+ + E +++ +H N+V++ +S G+ +
Sbjct: 166 IVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 225
Query: 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL 351
V+E++ G+L + + ++ Q ++ + V AL LH + V+H DIK ++LL
Sbjct: 226 VMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILL 280
Query: 352 DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV------SPKSDVYGYGITLIE 405
D LSDFG ++ KE R + L Y ++ P+ D++ GI +IE
Sbjct: 281 THDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 339
Query: 406 TFTKKKPTCEIFCEEMNLK--NWVNDFLPISVMNVVDTS 442
+ P + E LK + D LP + N+ S
Sbjct: 340 MVDGEPP----YFNEPPLKAMKMIRDNLPPRLKNLHKVS 374
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 29/279 (10%)
Query: 183 TRYRKGNTELSNIEVNMSPQAMWRRFSYQE----LLLATDHFSEKSL------IGIGSFG 232
R R+ N SPQ +R S+++ L L D +S IG GS G
Sbjct: 29 ARARQENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTG 88
Query: 233 TVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291
V G VA+K L+ + E +++ +H N+V++ +S G+ +
Sbjct: 89 IVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 148
Query: 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL 351
V+E++ G+L + + ++ Q ++ + V AL LH + V+H DIK ++LL
Sbjct: 149 VMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILL 203
Query: 352 DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV------SPKSDVYGYGITLIE 405
D LSDFG ++ KE R + L Y ++ P+ D++ GI +IE
Sbjct: 204 THDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE 262
Query: 406 TFTKKKPTCEIFCEEMNLK--NWVNDFLPISVMNVVDTS 442
+ P + E LK + D LP + N+ S
Sbjct: 263 MVDGEPP----YFNEPPLKAMKMIRDNLPPRLKNLHKVS 297
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 23/170 (13%)
Query: 213 LLLATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV 271
L A+D F E +++G G+FG V K R LD AIK + L + +E +L S+
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 272 RH-------------RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSN--GILDIFQ 316
H RN VK +++ + + +EY N +L ++S N D +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 317 RLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
RL I LE L + +S ++H D+KP N+ +D+ + DFG+AK
Sbjct: 120 RLFRQI-----LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSC 283
IG G++G VYK + G A+K L+ + G + E +LK ++H N+VK+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
LV E++ + L+K L G L+ S ++ + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 344 IKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
+KP N+L++ + ++DFG+A+ T + T+ Y
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWY 166
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAI------------------KVFHL---QFDGA 257
F E LIG G FG V+K + +DG I K+ H+ ++G
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 258 LKSFDAECEV----LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNG-IL 312
FD + E L+S + SS S + +E+ G+LE+ + G L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 313 DIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372
D L + + ++Y+H S ++H D+KPSN+ L D + DFG+ L +
Sbjct: 134 DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN-D 189
Query: 373 SMRTQTLATIEYGREGQVSPKS-----DVYGYGITLIE 405
RT++ T+ Y Q+S + D+Y G+ L E
Sbjct: 190 GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 232 GTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSCSN--GN 287
G ++KGR+ G ++ +KV ++ KS F+ EC L+ H N++ ++ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 288 FEALVLEYMANGSLEKCLYS-SNGILDIFQRLSIMIDVALALEYLHFGYSNPVV-HCDIK 345
L+ +M GSL L+ +N ++D Q + +D+A + +LH P++ +
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHALN 140
Query: 346 PSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLA---TIEYGREGQVSPKSDVYGYGIT 402
+V++D+DM A +S + M ++ E +D++ + +
Sbjct: 141 SRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200
Query: 403 LIETFTKKKPTCEIFCEEMNLK 424
L E T++ P ++ E+ +K
Sbjct: 201 LWELVTREVPFADLSNMEIGMK 222
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 226 IGIGSFGTVYKGR-----FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G FG VY R F+ ++V K L+ G E E+ +RH N++++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKT-QLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALEYLHFGYSNPV 339
+ L+LEY G++ + L + + QR + I ++A AL Y H S V
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSRFDE--QRTATYITELANALSYCH---SKRV 133
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
+H DIKP N+LL + ++DFG + ++ S R T++Y
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDY 176
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DG----MEVAIKVFHLQFD-GALKSFDAECEV 267
+L + ++G G+FGTVYKG ++ DG + VAIKV A K E V
Sbjct: 13 ILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYV 72
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ V + +++ C + LV + M G L + + G L L+ + +A
Sbjct: 73 MAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKG 131
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN----------GKESMRTQ 377
+ YL +VH D+ NVL+ ++DFG+A+LL+ GK ++
Sbjct: 132 MSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWM 188
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
L +I R + +SDV+ YG+T+ E T
Sbjct: 189 ALESILRRR---FTHQSDVWSYGVTVWELMT 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 242 GMEVAIKVFHLQFDGALKS-FDAECEVLKSVRHRNLVKIISSCSNGNFEAL--VLEYMAN 298
G VA+K +S + E ++L+++ H +++K C + ++L V+EY+
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 299 GSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAH 358
GSL Y + + Q L + + YLH + +H ++ NVLLD+D +
Sbjct: 103 GSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVK 157
Query: 359 LSDFGIAKLL-NGKESMRTQT-------LATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ DFG+AK + G E R + E +E + SDV+ +G+TL E T
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F IG GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EYM G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR 194
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 215 LATDHFSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGALK-SFDAECEVLKSVR 272
L D F + S +G G+ G V+K G+ +A K+ HL+ A++ E +VL
Sbjct: 22 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN 81
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD-IFQRLSIMIDVALALEYL 331
+V + + ++ +E+M GSL++ L + I + I ++SI V L YL
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYL 139
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYG-----R 386
+ ++H D+KPSN+L++ L DFG++ L +SM + T Y +
Sbjct: 140 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMSPERLQ 195
Query: 387 EGQVSPKSDVYGYGITLIETFTKKKP 412
S +SD++ G++L+E + P
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 29/262 (11%)
Query: 200 SPQAMWRRFSYQE----LLLATDHFSEKSL------IGIGSFGTVYKGRFLD-GMEVAIK 248
SPQ +R S+++ L L D +S IG GS G V G VA+K
Sbjct: 3 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVK 62
Query: 249 VFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS 308
L+ + E +++ +H N+V++ +S G+ +V+E++ G+L + +
Sbjct: 63 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT 122
Query: 309 NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368
++ Q ++ + V AL LH + V+H DIK ++LL D LSDFG +
Sbjct: 123 R--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 177
Query: 369 NGKESMRTQTLATIEYGREGQV------SPKSDVYGYGITLIETFTKKKPTCEIFCEEMN 422
+ KE R + L Y ++ P+ D++ GI +IE + P + E
Sbjct: 178 S-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP----YFNEPP 232
Query: 423 LK--NWVNDFLPISVMNVVDTS 442
LK + D LP + N+ S
Sbjct: 233 LKAMKMIRDNLPPRLKNLHKVS 254
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++ G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 177
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F IG GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EYM G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR 194
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQ-FDGALKSFDAECEVLKSVRHRN 275
D + + +IG G+ V E VAIK +L+ ++ E + + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYS-------SNGILDIFQRLSIMIDVALAL 328
+V +S + LV++ ++ GS+ + +G+LD +I+ +V L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLATIEYGRE 387
EYLH N +H D+K N+LL +D ++DFG++ L G + R + T G
Sbjct: 130 EYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF-VGTP 185
Query: 388 GQVSP-----------KSDVYGYGITLIETFTKKKP 412
++P K+D++ +GIT IE T P
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGAL-----KSFDAECEV 267
+L F + ++ G+FGTVYKG ++ +G +V I V + A K E V
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
+ SV + ++ +++ C + L+ + M G L + + L+ + +A
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL +VH D+ NVL+ ++DFG+AKLL +E EY E
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---------EYHAE 184
Query: 388 GQVSP----------------KSDVYGYGITLIETFT 408
G P +SDV+ YG+T+ E T
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 29/262 (11%)
Query: 200 SPQAMWRRFSYQE----LLLATDHFSEKSL------IGIGSFGTVYKGRFLD-GMEVAIK 248
SPQ +R S+++ L L D +S IG GS G V G VA+K
Sbjct: 1 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVK 60
Query: 249 VFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS 308
L+ + E +++ +H N+V++ +S G+ +V+E++ G+L + +
Sbjct: 61 KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT 120
Query: 309 NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368
++ Q ++ + V AL LH + V+H DIK ++LL D LSDFG +
Sbjct: 121 R--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 175
Query: 369 NGKESMRTQTLATIEYGREGQV------SPKSDVYGYGITLIETFTKKKPTCEIFCEEMN 422
+ KE R + L Y ++ P+ D++ GI +IE + P + E
Sbjct: 176 S-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP----YFNEPP 230
Query: 423 LK--NWVNDFLPISVMNVVDTS 442
LK + D LP + N+ S
Sbjct: 231 LKAMKMIRDNLPPRLKNLHKVS 252
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTL-ATIEY 384
S +++ D+KP N+L+D ++DFG AK + G RT TL T EY
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEY 205
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 204 MWRRFSYQELLLATDH----FSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGAL 258
+W+++ Q + + DH + +G G+FG V++ G A K +
Sbjct: 33 IWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK 92
Query: 259 KSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRL 318
++ E + + +RH LV + + + N ++ E+M+ G L + + + + + +
Sbjct: 93 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 152
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLS--DFGIAKLLNGKESMRT 376
M V L ++H N VH D+KP N++ L DFG+ L+ K+S++
Sbjct: 153 EYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 209
Query: 377 QT----LATIEYGREGQVSPKSDVYGYGI 401
T A E V +D++ G+
Sbjct: 210 TTGTAEFAAPEVAEGKPVGYYTDMWSVGV 238
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 7/162 (4%)
Query: 226 IGIGSFGTVYKGRFLDGME-VAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISS 282
IG G++GTV+K + + E VA+K L D G S E +LK ++H+N+V++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
+ LV E+ + L+K S NG LD S + + L+ L F +S V+H
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQL---LKGLGFCHSRNVLHR 125
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
D+KP N+L++ + L++FG+A+ + + T+ Y
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWY 167
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 204 MWRRFSYQELLLATDH----FSEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGAL 258
+W+++ Q + + DH + +G G+FG V++ G A K +
Sbjct: 139 IWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK 198
Query: 259 KSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRL 318
++ E + + +RH LV + + + N ++ E+M+ G L + + + + + +
Sbjct: 199 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 258
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLS--DFGIAKLLNGKESMRT 376
M V L ++H N VH D+KP N++ L DFG+ L+ K+S++
Sbjct: 259 EYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 315
Query: 377 QT----LATIEYGREGQVSPKSDVYGYGI 401
T A E V +D++ G+
Sbjct: 316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGV 344
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 223 KSLIGIGSFGTVYKGRF-LDGMEVAIKVF-HLQFD-GALKSFDAECEVLKSVRHRNLVKI 279
+ IG G+F V R L G EVA+K+ Q + +L+ E ++K + H N+VK+
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPV 339
LV+EY + G + L + + + R + A++Y H Y +
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---I 135
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIA 365
VH D+K N+LLD DM ++DFG +
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTL-ATIEY 384
S +++ D+KP N+L+D ++DFG AK + G RT TL T EY
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEY 190
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 32/209 (15%)
Query: 229 GSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKS--VRHRNLVKIISSCSNG 286
G FG V+K + ++ VA+K+F LQ +S+ +E E+ + ++H NL++ I++ G
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDK---QSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 287 -NFEA---LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF--------G 334
N E L+ + GSL Y I+ + + ++ L YLH G
Sbjct: 82 SNLEVELWLITAFHDKGSLTD--YLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA-KLLNGKESMRTQ-TLATIEYGR----EG 388
+ + H D K NVLL D+ A L+DFG+A + GK T + T Y EG
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEG 199
Query: 389 QVSPKS------DVYGYGITLIETFTKKK 411
++ + D+Y G+ L E ++ K
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELVSRCK 228
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQ-FDGALKSFDAECEVLKSVRHRN 275
D + + +IG G+ V E VAIK +L+ ++ E + + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYS-------SNGILDIFQRLSIMIDVALAL 328
+V +S + LV++ ++ GS+ + +G+LD +I+ +V L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL-NGKESMRTQTLATIEYGRE 387
EYLH N +H D+K N+LL +D ++DFG++ L G + R + T G
Sbjct: 135 EYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF-VGTP 190
Query: 388 GQVSP-----------KSDVYGYGITLIETFTKKKP 412
++P K+D++ +GIT IE T P
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 24/166 (14%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKI 279
++ +IG GSFG V++ + ++ EVAIK LQ D K + E ++++ V+H N+V +
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQ-DKRFK--NRELQIMRIVKHPNVVDL 97
Query: 280 IS-SCSNGN-----FEALVLEYMANGSLEKCLYSSNGILDIFQRLSI------MIDVALA 327
+ SNG+ F LVLEY+ E +S + Q + + M + +
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLLNGKE 372
L Y+H S + H DIKP N+LLD V L DFG AK+L E
Sbjct: 154 LAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLA-TIEY 384
S +++ D+KP N+L+D ++DFG AK + G RT LA T EY
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLAGTPEY 204
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 216 ATDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRH 273
++ F + +G G++ TVYKG G+ VA+K L + G + E ++K ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA---LEY 330
N+V++ N LV E+M N L+K + S + + + L + + L+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYM-DSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV 390
L F + N ++H D+KP N+L++ L DFG+A+ + + + T+ Y R V
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWY-RAPDV 179
Query: 391 -------SPKSDVYGYGITLIETFTKK 410
S D++ G L E T K
Sbjct: 180 LMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFDGALKS-FDA 263
+E+ L+ F E+ +G FG VYKG VAIK + +G L+ F
Sbjct: 21 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----YSSNGILDIFQRL 318
E + ++H N+V ++ + +++ Y ++G L + L +S G D + +
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 319 S----------IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-- 366
++ +A +EYL S+ VVH D+ NVL+ D + +SD G+ +
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 367 --------LLNGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKK-KPTC 414
L N +R I YG+ S SD++ YG+ L E F+ +P C
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGK---FSIDSDIWSYGVVLWEVFSYGLQPYC 249
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALK-SFDAECEVLKSVR 272
L D F S +G G+ G V K + G+ +A K+ HL+ A++ E +VL
Sbjct: 13 LKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN 72
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD-IFQRLSIMIDVALALEYL 331
+V + + ++ +E+M GSL++ L + I + I ++SI + LA YL
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA--YL 130
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV- 390
+ ++H D+KPSN+L++ L DFG++ L +SM + T Y ++
Sbjct: 131 REKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFVGTRSYMAPERLQ 186
Query: 391 ----SPKSDVYGYGITLIETFTKKKP 412
S +SD++ G++L+E + P
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 15/195 (7%)
Query: 226 IGIGSFGTVYK-GRFLDGMEVAIKV--FHLQFDGALKSFDAECEVLKSVRHRNLVKIISS 282
IG GS+G K R DG + K + + + +E +L+ ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 283 CSNGNFEAL--VLEYMANGSLEKCLYS---SNGILDIFQRLSIMIDVALALEYLHFGYS- 336
+ L V+EY G L + LD L +M + LAL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 337 -NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV----- 390
+ V+H D+KP+NV LD L DFG+A++LN E + + T Y Q+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 391 SPKSDVYGYGITLIE 405
+ KSD++ G L E
Sbjct: 194 NEKSDIWSLGCLLYE 208
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVF-HLQFD-GALKSFDAECEVLKSVRHRNLVKIISS 282
IG G+F V R L G EVAIK+ Q + +L+ E ++K + H N+VK+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
L++EY + G + L + +G + + S + A++Y H +VH
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCH---QKRIVHR 135
Query: 343 DIKPSNVLLDDDMVAHLSDFGIA 365
D+K N+LLD DM ++DFG +
Sbjct: 136 DLKAENLLLDADMNIKIADFGFS 158
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 33/212 (15%)
Query: 226 IGIGSFGTVYK------GRFLDGMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + G+ ++VA+K+ H AL S E +++ + +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHE 110
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG 334
N+V ++ +C++G ++ EY G L L + +L+ +I A + LHF
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 335 ----------YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNGKESMRT 376
S +H D+ NVLL + VA + DFG+A+ ++ G +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 377 QTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ +A E + + +SDV+ YGI L E F+
Sbjct: 231 KWMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFDGALKS-FDA 263
+E+ L+ F E+ +G FG VYKG VAIK + +G L+ F
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----YSSNGILDIFQRL 318
E + ++H N+V ++ + +++ Y ++G L + L +S G D + +
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 319 S----------IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-- 366
++ +A +EYL S+ VVH D+ NVL+ D + +SD G+ +
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 367 --------LLNGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKK-KPTC 414
L N +R I YG+ S SD++ YG+ L E F+ +P C
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGK---FSIDSDIWSYGVVLWEVFSYGLQPYC 232
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 145
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D+ ++DFG AK + G+
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR 181
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 153
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 189
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVF-HLQFDGA-LKSFDAECEVLKSVRHRNLVKIISS 282
IG G+F V R L G EVA+K+ Q + + L+ E ++K + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
LV+EY + G + L ++G + + + + A++Y H + +VH
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 343 DIKPSNVLLDDDMVAHLSDFGIA 365
D+K N+LLD DM ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVF-HLQFDGA-LKSFDAECEVLKSVRHRNLVKIISS 282
IG G+F V R L G EVA+K+ Q + + L+ E ++K + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
LV+EY + G + L ++G + + + + A++Y H + +VH
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 343 DIKPSNVLLDDDMVAHLSDFGIA 365
D+K N+LLD DM ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVF-HLQFDGA-LKSFDAECEVLKSVRHRNLVKIISS 282
IG G+F V R L G EVA+K+ Q + + L+ E ++K + H N+VK+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
LV+EY + G + L ++G + + + + A++Y H + +VH
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYL-VAHGWMKEKEARAKFRQIVSAVQYCHQKF---IVHR 130
Query: 343 DIKPSNVLLDDDMVAHLSDFGIA 365
D+K N+LLD DM ++DFG +
Sbjct: 131 DLKAENLLLDADMNIKIADFGFS 153
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLD-GMEVAIK--VFHLQFDGALKSFDAECEVLKSVRHRNL 276
+ + + IG G+FG V+K R G +VA+K + + +G + E ++L+ ++H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD----IFQRLSIMIDVALALEYLH 332
V +I C + + C + G+L F I + + L L+
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL----NGKESMRTQTLATIEYGR-- 386
+ + N ++H D+K +NVL+ D V L+DFG+A+ N + + + T+ Y
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 387 ----EGQVSPKSDVYGYGITLIETFTK 409
E P D++G G + E +T+
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVF-HLQFDGA-LKSFDAECEVLKSVRHRNLVKIISS 282
IG G+F V R L G EVA+K+ Q + + L+ E ++K + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
LV+EY + G + L ++G + + + + A++Y H + +VH
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 343 DIKPSNVLLDDDMVAHLSDFGIA 365
D+K N+LLD DM ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVF-HLQFD-GALKSFDAECEVLKSVRHRNLVKIISS 282
IG G+F V R L G EVAIK+ Q + +L+ E ++K + H N+VK+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
L++EY + G + L + +G + + S + A++Y H +VH
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCH---QKRIVHR 138
Query: 343 DIKPSNVLLDDDMVAHLSDFGIA 365
D+K N+LLD DM ++DFG +
Sbjct: 139 DLKAENLLLDADMNIKIADFGFS 161
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 179
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 215
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 195
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFH---LQFDGALKSFDAECEVLKSVRHRN 275
F +L+G GSF VY+ + G+EVAIK+ + G ++ E ++ ++H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
++++ + + N+ LVLE NG + + L + + M + + YLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH--- 129
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368
S+ ++H D+ SN+LL +M ++DFG+A L
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLD-GMEVAIK--VFHLQFDGALKSFDAECEVLKSVRHRNL 276
+ + + IG G+FG V+K R G +VA+K + + +G + E ++L+ ++H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD----IFQRLSIMIDVALALEYLH 332
V +I C + + C + G+L F I + + L L+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL----NGKESMRTQTLATIEYGR-- 386
+ + N ++H D+K +NVL+ D V L+DFG+A+ N + + + T+ Y
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 387 ----EGQVSPKSDVYGYGITLIETFTK 409
E P D++G G + E +T+
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 194 NIEVNMSPQAMWRRFSYQELLLATDHFS-EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHL 252
+ EV SP A +E+ L + E +G G+FGTV KG + V +
Sbjct: 2 DTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI 61
Query: 253 ----QFDGALK-SFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS 307
D ALK AE V++ + + +V++I C ++ LV+E G L K L
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ 120
Query: 308 SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367
+ + D + ++ V++ ++YL + VH D+ NVLL A +SDFG++K
Sbjct: 121 NRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 176
Query: 368 LNGKES-MRTQTLATIE---YGREG----QVSPKSDVYGYGITLIETFT-KKKP 412
L E+ + QT Y E + S KSDV+ +G+ + E F+ +KP
Sbjct: 177 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 194 NIEVNMSPQAMWRRFSYQELLLATDHFS-EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHL 252
+ EV SP A +E+ L + E +G G+FGTV KG + V +
Sbjct: 2 DTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI 61
Query: 253 ----QFDGALK-SFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS 307
D ALK AE V++ + + +V++I C ++ LV+E G L K L
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ 120
Query: 308 SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367
+ + D + ++ V++ ++YL + VH D+ NVLL A +SDFG++K
Sbjct: 121 NRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 176
Query: 368 LNGKES-MRTQTLATIE---YGREG----QVSPKSDVYGYGITLIETFT-KKKP 412
L E+ + QT Y E + S KSDV+ +G+ + E F+ +KP
Sbjct: 177 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 47/216 (21%)
Query: 224 SLIGIGSFGTVYKGRFLDGMEV----AIKVFHLQFDGALKSFDA-----ECEVLKSVRHR 274
++G GSFG V+ + + G + A+KV LK D E ++L V H
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLK---KATLKVRDRVRTKMERDILVEVNHP 87
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------------IMI 322
+VK+ + L+L+++ G D+F RLS +
Sbjct: 88 FIVKLHYAFQTEGKLYLILDFLRGG-------------DLFTRLSKEVMFTEEDVKFYLA 134
Query: 323 DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI 382
++ALAL++LH S +++ D+KP N+LLD++ L+DFG++K E T+
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 191
Query: 383 EY------GREGQVSPKSDVYGYGITLIETFTKKKP 412
EY R G +D + +G+ + E T P
Sbjct: 192 EYMAPEVVNRRGHTQ-SADWWSFGVLMFEMLTGTLP 226
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLD-GMEVAIK--VFHLQFDGALKSFDAECEVLKSVRHRNL 276
+ + + IG G+FG V+K R G +VA+K + + +G + E ++L+ ++H N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD----IFQRLSIMIDVALALEYLH 332
V +I C + + C + G+L F I + + L L+
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 138
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL----NGKESMRTQTLATIEYGR-- 386
+ + N ++H D+K +NVL+ D V L+DFG+A+ N + + + T+ Y
Sbjct: 139 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 198
Query: 387 ----EGQVSPKSDVYGYGITLIETFTK 409
E P D++G G + E +T+
Sbjct: 199 LLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVFHLQFDGALK-SFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 53 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIV 111
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 168
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 169 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F IG GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR 194
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 47/216 (21%)
Query: 224 SLIGIGSFGTVYKGRFLDGMEV----AIKVFHLQFDGALKSFDA-----ECEVLKSVRHR 274
++G GSFG V+ + + G + A+KV LK D E ++L V H
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLK---KATLKVRDRVRTKMERDILVEVNHP 86
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------------IMI 322
+VK+ + L+L+++ G D+F RLS +
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGG-------------DLFTRLSKEVMFTEEDVKFYLA 133
Query: 323 DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI 382
++ALAL++LH S +++ D+KP N+LLD++ L+DFG++K E T+
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 383 EY------GREGQVSPKSDVYGYGITLIETFTKKKP 412
EY R G +D + +G+ + E T P
Sbjct: 191 EYMAPEVVNRRGHTQ-SADWWSFGVLMFEMLTGTLP 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 222 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHL----QFDGALK-SFDAECEVLKSVRHRNL 276
E +G G+FGTV KG + V + D ALK AE V++ + + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
V++I C ++ LV+E G L K L + + D + ++ V++ ++YL
Sbjct: 89 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 143
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES-MRTQTLATIE---YGREG---- 388
+ VH D+ NVLL A +SDFG++K L E+ + QT Y E
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 389 QVSPKSDVYGYGITLIETFT-KKKP 412
+ S KSDV+ +G+ + E F+ +KP
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 195
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLD-GMEVAIK--VFHLQFDGALKSFDAECEVLKSVRHRNL 276
+ + + IG G+FG V+K R G +VA+K + + +G + E ++L+ ++H N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD----IFQRLSIMIDVALALEYLH 332
V +I C + + C + G+L F I + + L L+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL----NGKESMRTQTLATIEYGR-- 386
+ + N ++H D+K +NVL+ D V L+DFG+A+ N + + + T+ Y
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPE 199
Query: 387 ----EGQVSPKSDVYGYGITLIETFTK 409
E P D++G G + E +T+
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 47/216 (21%)
Query: 224 SLIGIGSFGTVYKGRFLDGMEV----AIKVFHLQFDGALKSFDA-----ECEVLKSVRHR 274
++G GSFG V+ + + G + A+KV LK D E ++L V H
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLK---KATLKVRDRVRTKMERDILVEVNHP 86
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------------IMI 322
+VK+ + L+L+++ G D+F RLS +
Sbjct: 87 FIVKLHYAFQTEGKLYLILDFLRGG-------------DLFTRLSKEVMFTEEDVKFYLA 133
Query: 323 DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATI 382
++ALAL++LH S +++ D+KP N+LLD++ L+DFG++K E T+
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 383 EY------GREGQVSPKSDVYGYGITLIETFTKKKP 412
EY R G +D + +G+ + E T P
Sbjct: 191 EYMAPEVVNRRGHTQ-SADWWSFGVLMFEMLTGTLP 225
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 222 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHL----QFDGALK-SFDAECEVLKSVRHRNL 276
E +G G+FGTV KG + V + D ALK AE V++ + + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
V++I C ++ LV+E G L K L + + D + ++ V++ ++YL
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 129
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESM-RTQTLATIE---YGREG---- 388
+ VH D+ NVLL A +SDFG++K L E+ + QT Y E
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 389 QVSPKSDVYGYGITLIETFT-KKKP 412
+ S KSDV+ +G+ + E F+ +KP
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 194 NIEVNMSPQAMWRRFSYQELLLATDHFS-EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHL 252
+ EV SP A +E+ L + E +G G+FGTV KG + V +
Sbjct: 345 DTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKI 404
Query: 253 ----QFDGALK-SFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS 307
D ALK AE V++ + + +V++I C ++ LV+E G L K L
Sbjct: 405 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ 463
Query: 308 SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367
+ + D + ++ V++ ++YL + VH D+ NVLL A +SDFG++K
Sbjct: 464 NRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 519
Query: 368 LNGKES-MRTQTLATIE---YGREG----QVSPKSDVYGYGITLIETFT-KKKP 412
L E+ + QT Y E + S KSDV+ +G+ + E F+ +KP
Sbjct: 520 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 222 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHL----QFDGALK-SFDAECEVLKSVRHRNL 276
E +G G+FGTV KG + V + D ALK AE V++ + + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
V++I C ++ LV+E G L K L + + D + ++ V++ ++YL
Sbjct: 69 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 123
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES-MRTQTLATIE---YGREG---- 388
+ VH D+ NVLL A +SDFG++K L E+ + QT Y E
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 389 QVSPKSDVYGYGITLIETFT-KKKP 412
+ S KSDV+ +G+ + E F+ +KP
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVF-HLQFDGA-LKSFDAECEVLKSVRHRNLVKIISS 282
IG G+F V R L G EVA+++ Q + + L+ E ++K + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
LV+EY + G + L ++G + + + + A++Y H + +VH
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVHR 137
Query: 343 DIKPSNVLLDDDMVAHLSDFGIA 365
D+K N+LLD DM ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVF-HLQFDGA-LKSFDAECEVLKSVRHRNLVKIISS 282
IG G+F V R L G EVA+++ Q + + L+ E ++K + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
LV+EY + G + L + + + R + A++Y H + +VH
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 343 DIKPSNVLLDDDMVAHLSDFGIA 365
D+K N+LLD DM ++DFG +
Sbjct: 138 DLKAENLLLDADMNIKIADFGFS 160
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 222 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHL----QFDGALK-SFDAECEVLKSVRHRNL 276
E +G G+FGTV KG + V + D ALK AE V++ + + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
V++I C ++ LV+E G L K L + + D + ++ V++ ++YL
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 125
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES-MRTQTLATIE---YGREG---- 388
+ VH D+ NVLL A +SDFG++K L E+ + QT Y E
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 389 QVSPKSDVYGYGITLIETFT-KKKP 412
+ S KSDV+ +G+ + E F+ +KP
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 222 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHL----QFDGALK-SFDAECEVLKSVRHRNL 276
E +G G+FGTV KG + V + D ALK AE V++ + + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
V++I C ++ LV+E G L K L + + D + ++ V++ ++YL
Sbjct: 81 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 135
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES-MRTQTLATIE---YGREG---- 388
+ VH D+ NVLL A +SDFG++K L E+ + QT Y E
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 389 QVSPKSDVYGYGITLIETFT-KKKP 412
+ S KSDV+ +G+ + E F+ +KP
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 26/224 (11%)
Query: 200 SPQAMWRRFSYQELLLATDHFSEKSLIGIGSFGTVY-----KGRFLDGMEVAIKVFHLQF 254
+P + R F+ D F +G G FG VY K F+ ++V K ++
Sbjct: 12 TPDILTRHFT-------IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKS-QIEK 63
Query: 255 DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDI 314
+G E E+ + H N++++ + + L+LEY G L K L S D
Sbjct: 64 EGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS-CTFDE 122
Query: 315 FQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESM 374
+ +IM ++A AL Y H V+H DIKP N+LL ++DFG + S+
Sbjct: 123 QRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSL 176
Query: 375 RTQTL-ATIEYGR----EGQV-SPKSDVYGYGITLIETFTKKKP 412
R +T+ T++Y EG++ + K D++ G+ E P
Sbjct: 177 RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 222 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHL----QFDGALK-SFDAECEVLKSVRHRNL 276
E +G G+FGTV KG + V + D ALK AE V++ + + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
V++I C ++ LV+E G L K L + + D + ++ V++ ++YL
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 129
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES-MRTQTLATIE---YGREG---- 388
+ VH D+ NVLL A +SDFG++K L E+ + QT Y E
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 389 QVSPKSDVYGYGITLIETFT-KKKP 412
+ S KSDV+ +G+ + E F+ +KP
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ + H+N+V
Sbjct: 39 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 97
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 154
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 155 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 195
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 32/208 (15%)
Query: 223 KSLIGIGSFGTV-YKGRFLDGMEVAIKVFHLQFDGALKSFDAECEV------LKSVRHRN 275
+ +G GSFG V + +VA+K Q LK D V LK +RH +
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQL---LKKSDMHMRVEREISYLKLLRHPH 70
Query: 276 LVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALALEY 330
++K+ + +V+EY A G L EK + + FQ+ + A+EY
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQ------IICAIEY 123
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV 390
H + +VH D+KP N+LLDD++ ++DFG++ ++ ++T + + Y +
Sbjct: 124 CH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVI 179
Query: 391 S------PKSDVYGYGITLIETFTKKKP 412
+ P+ DV+ GI L + P
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 222 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHL----QFDGALK-SFDAECEVLKSVRHRNL 276
E +G G+FGTV KG + V + D ALK AE V++ + + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
V++I C ++ LV+E G L K L + + D + ++ V++ ++YL
Sbjct: 433 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 487
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES-MRTQTLATIE---YGREG---- 388
+ VH D+ NVLL A +SDFG++K L E+ + QT Y E
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 389 QVSPKSDVYGYGITLIETFT-KKKP 412
+ S KSDV+ +G+ + E F+ +KP
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 213 LLLATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV 271
L A+D F E +++G G+FG V K R LD AIK + L + +E +L S+
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASL 59
Query: 272 RH-------------RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSN--GILDIFQ 316
H RN VK ++ + + EY N +L ++S N D +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 317 RLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
RL I LE L + +S ++H ++KP N+ +D+ + DFG+AK
Sbjct: 120 RLFRQI-----LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 226 IGIGSFGTVYKGR--FLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISS 282
+G G++ TVYKG+ D + VA+K L+ + GA + E +LK ++H N+V +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
LV EY+ + L++ L I+++ + + L Y H V+H
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHR 124
Query: 343 DIKPSNVLLDDDMVAHLSDFGIAK 366
D+KP N+L+++ L+DFG+A+
Sbjct: 125 DLKPQNLLINERGELKLADFGLAR 148
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ + H+N+V
Sbjct: 53 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIV 111
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 168
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 169 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 19/226 (8%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
IG GS G V G VA+K L+ + E +++ +H N+V++ +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
G+ +V+E++ G+L + + ++ Q ++ + V AL LH + V+H DI
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 142
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV------SPKSDVYG 398
K ++LL D LSDFG ++ KE R + L Y ++ P+ D++
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 201
Query: 399 YGITLIETFTKKKPTCEIFCEEMNLK--NWVNDFLPISVMNVVDTS 442
GI +IE + P + E LK + D LP + N+ S
Sbjct: 202 LGIMVIEMVDGEPP----YFNEPPLKAMKMIRDNLPPRLKNLHKVS 243
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 113
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 174 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-----SNGILDIFQRLS 319
V+K ++V+++ S G +++E M G L+ L S +N + LS
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 320 IMI----DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
MI ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 139 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLDGMEV-AIKVFHLQF---DGALKSFDAECEVLKSVRH 273
DHF IG GSFG V + D ++ A+K + Q +++ E ++++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LV + S + +V++ + G L L + + +L I ++ +AL+YL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI-CELVMALDYLQ- 132
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY-------GR 386
+ ++H D+KP N+LLD+ H++DF IA +L +E+ T T Y R
Sbjct: 133 --NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYMAPEMFSSR 189
Query: 387 EGQ-VSPKSDVYGYGITLIETFTKKKP 412
+G S D + G+T E ++P
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 226 IGIGSFGTVY--KGRFLDGMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRHRNLVKII 280
+G GSFG V+ + R +G A+KV + LK + E +L V H ++++
Sbjct: 14 LGTGSFGRVHLIRSRH-NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ + ++++Y+ G L L S + + +V LALEYLH S ++
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDII 128
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL 368
+ D+KP N+LLD + ++DFG AK +
Sbjct: 129 YRDLKPENILLDKNGHIKITDFGFAKYV 156
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 19/226 (8%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
IG GS G V G VA+K L+ + E +++ +H N+V++ +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
G+ +V+E++ G+L + + ++ Q ++ + V AL LH + V+H DI
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 146
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV------SPKSDVYG 398
K ++LL D LSDFG ++ KE R + L Y ++ P+ D++
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 205
Query: 399 YGITLIETFTKKKPTCEIFCEEMNLK--NWVNDFLPISVMNVVDTS 442
GI +IE + P + E LK + D LP + N+ S
Sbjct: 206 LGIMVIEMVDGEPP----YFNEPPLKAMKMIRDNLPPRLKNLHKVS 247
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 65 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 180
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 181 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 111
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 172 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 111
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 172 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 90
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 151 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 85
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 146 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 96
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 157 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 45 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 103
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 160
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 161 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 226 IGIGSFGTV-YKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
IG GS G V G +VA+K L+ + E +++ H N+V + SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
G+ +V+E++ G+L + + ++ Q ++ + V AL YLH + V+H DI
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVIHRDI 167
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV------SPKSDVYG 398
K ++LL D LSDFG ++ KE + + L Y +V + D++
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVS-KEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 399 YGITLIETFTKKKP 412
GI +IE + P
Sbjct: 227 LGIMVIEMIDGEPP 240
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 78
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 139 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 82
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 143 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 77
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 77
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 77
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 115
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 176 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 39 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 154
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 155 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 105
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 166 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 55 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 113
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 170
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 171 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-----SNGILDIFQRLS 319
V+K ++V+++ S G +++E M G L+ L S N + LS
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 320 IMI----DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
MI ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 124 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 26/224 (11%)
Query: 208 FSYQELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS--- 260
F E +A + + +G GSFG VY KG D E + + + +++
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 261 FDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-----SNGILDIF 315
F E V+K ++V+++ S G +++E M G L+ L S N +
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 316 QRLSIMI----DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--- 368
LS MI ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 126 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 369 ----NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 38 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 153
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 154 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 156
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 217 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 89
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 150 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGA-LKSFDAECEVLKSVRHRNLVKI- 279
K +G G FG V + D G +VAIK + + + E +++K + H N+V
Sbjct: 20 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 280 -----ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQR--LSIMIDVALALEYLH 332
+ + + L +EY G L K L + + +++ D++ AL YLH
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 139
Query: 333 FGYSNPVVHCDIKPSNVLLD---DDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
N ++H D+KP N++L ++ + D G AK L+ E + T+ + T++Y
Sbjct: 140 ---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPEL 195
Query: 390 VSPKS-----DVYGYGITLIETFTKKKP 412
+ K D + +G E T +P
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 89
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 150 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-----SNGILDIFQRLS 319
V+K ++V+++ S G +++E M G L+ L S +N + LS
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 320 IMI----DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
MI ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 129 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 185
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 186 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHLQ--FDGALKSFDAECEVLK-- 269
+AT + + IG+G++GTVYK R G VA+K + +G S E +L+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 270 -SVRHRNLVKIISSCSNGNFE-----ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
+ H N+V+++ C+ + LV E++ + L +M
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
L++LH +N +VH D+KP N+L+ L+DFG+A++ + + ++ + T+
Sbjct: 121 FLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-APVVVTLW 176
Query: 384 YGREGQVSPKS------DVYGYGITLIETFTKKKPTCEIFC 418
Y R +V +S D++ G E F +K +FC
Sbjct: 177 Y-RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP----LFC 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGA-LKSFDAECEVLKSVRHRNLVKI- 279
K +G G FG V + D G +VAIK + + + E +++K + H N+V
Sbjct: 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 280 -----ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQR--LSIMIDVALALEYLH 332
+ + + L +EY G L K L + + +++ D++ AL YLH
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 333 FGYSNPVVHCDIKPSNVLLD---DDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQ 389
N ++H D+KP N++L ++ + D G AK L+ E + T+ + T++Y
Sbjct: 139 ---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPEL 194
Query: 390 VSPKS-----DVYGYGITLIETFTKKKP 412
+ K D + +G E T +P
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 77
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 19/160 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK 278
+++ +IG GSFG VY+ + D E VAIK LQ D K + E ++++ + H N+V+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 81
Query: 279 I----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEY 330
+ SS + + LVL+Y+ + S L + M + +L Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 331 LH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 142 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-----SNGILDIFQRLS 319
V+K ++V+++ S G +++E M G L+ L S N + LS
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 320 IMI----DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
MI ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 132 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+++D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR 194
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 226 IGIGSFGTVYK-GRFLDGMEVAIKV--FHLQFDGALKSFDAECEVLKSVRHRNLVKIISS 282
IG GS+G K R DG + K + + + +E +L+ ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 283 CSNGNFEAL--VLEYMANGSLEKCLYSSNG---ILDIFQRLSIMIDVALALEYLHFGY-- 335
+ L V+EY G L + LD L +M + LAL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV----- 390
+ V+H D+KP+NV LD L DFG+A++LN S + T Y Q+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 391 SPKSDVYGYGITLIE 405
+ KSD++ G L E
Sbjct: 194 NEKSDIWSLGCLLYE 208
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+A G + L + R + L EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370
S +++ D+KP N+L+D ++DFG AK + G
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 30 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 88
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 145
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 146 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 15/195 (7%)
Query: 226 IGIGSFGTVYK-GRFLDGMEVAIKV--FHLQFDGALKSFDAECEVLKSVRHRNLVKIISS 282
IG GS+G K R DG + K + + + +E +L+ ++H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 283 CSNGNFEAL--VLEYMANGSLEKCLYSSNG---ILDIFQRLSIMIDVALALEYLHFGY-- 335
+ L V+EY G L + LD L +M + LAL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV----- 390
+ V+H D+KP+NV LD L DFG+A++LN S + T Y Q+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 391 SPKSDVYGYGITLIE 405
+ KSD++ G L E
Sbjct: 194 NEKSDIWSLGCLLYE 208
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-----SNGILDIFQRLS 319
V+K ++V+++ S G +++E M G L+ L S N + LS
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 320 IMI----DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
MI ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 139 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 39 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 154
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 155 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-----SNGILDIFQRLS 319
V+K ++V+++ S G +++E M G L+ L S N + LS
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 320 IMI----DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
MI ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 126 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 151
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 187
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 187 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-----SNGILDIFQRLS 319
V+K ++V+++ S G +++E M G L+ L S N + LS
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 320 IMI----DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
MI ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 133 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+++D ++DFG+AK + G+
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR 194
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 79 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 194
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLL-------NGKESMRTQT 378
+YL N +H DI N LL VA + DFG+A+ + G +M
Sbjct: 195 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 379 LATIEYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 56 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 114
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I ++LE MA G L+ L SS +LD+ L + D+A
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 171
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLL-------NGKESMRTQT 378
+YL N +H DI N LL VA + DFG+A+ + G +M
Sbjct: 172 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 379 LATIEYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 127
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 188 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 38 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I +++E MA G L+ L SS +LD+ L + D+A
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 153
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 154 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 33/212 (15%)
Query: 226 IGIGSFGTVYK------GRFLDGMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + G+ ++VA+K+ H AL S E +++ + +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHE 110
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG 334
N+V ++ +C++G ++ EY G L L + +L+ +I + LHF
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 335 ----------YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNGKESMRT 376
S +H D+ NVLL + VA + DFG+A+ ++ G +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 377 QTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ +A E + + +SDV+ YGI L E F+
Sbjct: 231 KWMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 187 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS------SNGIL---DIF 315
V+K ++V+++ S G +++E M G L+ L S +N +L +
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 316 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
+ + + ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 161 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 217
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 218 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHLQ--FDGALKSFDAECEVLK-- 269
+AT + + IG+G++GTVYK R G VA+K + +G S E +L+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 270 -SVRHRNLVKIISSCSNGNFE-----ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
+ H N+V+++ C+ + LV E++ + L +M
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
L++LH +N +VH D+KP N+L+ L+DFG+A++ + + ++ + T+
Sbjct: 121 FLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-DPVVVTLW 176
Query: 384 YGREGQVSPKS------DVYGYGITLIETFTKKKPTCEIFC 418
Y R +V +S D++ G E F +K +FC
Sbjct: 177 Y-RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP----LFC 212
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + +VA+K+ L+ D K +E E++K + +H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLS----- 319
+N++ ++ +C+ +++EY + G+L + L YS N + ++LS
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 320 -IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
VA +EYL S +H D+ NVL+ +D V ++DFG+A+ ++ + + T
Sbjct: 195 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ L E FT
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS------SNGIL---DIF 315
V+K ++V+++ S G +++E M G L+ L S +N +L +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 316 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
+ + + ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 132 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + +VA+K+ L+ D K +E E++K + +H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLS----- 319
+N++ ++ +C+ +++EY + G+L + L YS N + ++LS
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 320 -IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
VA +EYL S +H D+ NVL+ +D V ++DFG+A+ ++ + + T
Sbjct: 143 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ L E FT
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-----SNGILDIFQRLS 319
V+K ++V+++ S G +++E M G L+ L S N + LS
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 320 IMI----DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
MI ++A + YL+ +N VH D+ N ++ +D + DFG+ + +
Sbjct: 133 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 189
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 21/161 (13%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSF-DAECEVLKSVRHRNLV 277
+++ +IG GSFG VY+ + D E VAIK G K+F + E ++++ + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 278 KI----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALE 329
++ SS + + LVL+Y+ + S L + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 330 YLH-FGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLL 368
Y+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+++D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR 194
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 207 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 21/161 (13%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSF-DAECEVLKSVRHRNLV 277
+++ +IG GSFG VY+ + D E VAIK G K+F + E ++++ + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 278 KI----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALE 329
++ SS + + LVL+Y+ + S L + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 330 YLH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
Y+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 34/210 (16%)
Query: 226 IGIGSFGTVYKGRFLDGM-------EVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+FG VY+G+ + GM +VA+K + + F E ++ H+N+V
Sbjct: 53 LGHGAFGEVYEGQ-VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 111
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLY---------SSNGILDIFQRLSIMIDVALAL 328
+ I +++E MA G L+ L SS +LD+ L + D+A
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGC 168
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATI--- 382
+YL N +H DI N LL VA + DFG+A+ + R A +
Sbjct: 169 QYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 383 ----EYGREGQVSPKSDVYGYGITLIETFT 408
E EG + K+D + +G+ L E F+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + +VA+K+ L+ D K +E E++K + +H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLS----- 319
+N++ ++ +C+ +++EY + G+L + L YS N + ++LS
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 320 -IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
VA +EYL S +H D+ NVL+ +D V ++DFG+A+ ++ + + T
Sbjct: 147 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ L E FT
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + +VA+K+ L+ D K +E E++K + +H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLS----- 319
+N++ ++ +C+ +++EY + G+L + L YS N + ++LS
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 320 -IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
VA +EYL S +H D+ NVL+ +D V ++DFG+A+ ++ + + T
Sbjct: 146 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ L E FT
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ M VAIK + D + F E ++ H ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ + L DFG+++ + GK ++ +I + R +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRR---FT 190
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 191 SASDVWMFGVCMWE 204
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 225 LIGIGSFGTVYKGRFLDG--------MEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
++G G +G V++ R + G M+V K ++ AE +L+ V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
V +I + G L+LEY++ G L L GI + ++++AL +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTACFYLAEISMALGHLH---Q 139
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTL-----ATIEY 384
+++ D+KP N++L+ L+DFG+ KES+ T+ TIEY
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLC-----KESIHDGTVTHTFCGTIEY 187
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+++D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR 194
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 19/216 (8%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS----FDAECE 266
++L + + + +IG G+FG V R +V +F+ +S F E +
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 267 VLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
++ +V++ + + + +V+EYM G L L S+ + + + R +V L
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVL 179
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT-LATIEY- 384
AL+ +H S +H D+KP N+LLD L+DFG +N + +R T + T +Y
Sbjct: 180 ALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 236
Query: 385 --------GREGQVSPKSDVYGYGITLIETFTKKKP 412
G +G + D + G+ L E P
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + +VA+K+ L+ D K +E E++K + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLS----- 319
+N++ ++ +C+ +++EY + G+L + L YS N + ++LS
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 320 -IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
VA +EYL S +H D+ NVL+ +D V ++DFG+A+ ++ + + T
Sbjct: 154 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ L E FT
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 19/216 (8%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS----FDAECE 266
++L + + + +IG G+FG V R +V +F+ +S F E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 267 VLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
++ +V++ + + + +V+EYM G L L S+ + + + R +V L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVL 184
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT-LATIEY- 384
AL+ +H S +H D+KP N+LLD L+DFG +N + +R T + T +Y
Sbjct: 185 ALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 385 --------GREGQVSPKSDVYGYGITLIETFTKKKP 412
G +G + D + G+ L E P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+++D ++DFG+AK + G+
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR 194
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV---R 272
T F E IG G FG+V+K + LDG AIK G++ +A EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI---MIDVALALE 329
H ++V+ S+ + + + EY GSL + + I+ F+ + ++ V L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 330 YLHFGYSNPVVHCDIKPSNVLL 351
Y+H S +VH DIKPSN+ +
Sbjct: 128 YIH---SMSLVHMDIKPSNIFI 146
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + +VA+K+ L+ D K +E E++K + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLS----- 319
+N++ ++ +C+ +++EY + G+L + L YS N + ++LS
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 320 -IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
VA +EYL S +H D+ NVL+ +D V ++DFG+A+ ++ + + T
Sbjct: 154 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ L E FT
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 225 LIGIGSFGTVYKGRFLD-GMEVAIKVFH-LQFDGALKSFDAECEVLKSVRHRNLVKI--I 280
++G G+ V++GR G AIKVF+ + F + E EVLK + H+N+VK+ I
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQR--LSIMIDVALALEYLHFGYSNP 338
+ + L++E+ GSL L + + + L ++ DV + +L N
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENG 132
Query: 339 VVHCDIKPSNVLL----DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS 394
+VH +IKP N++ D V L+DFG A+ L E + YG E + P
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL------YGTEEYLHP-- 184
Query: 395 DVY 397
D+Y
Sbjct: 185 DMY 187
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV---R 272
T F E IG G FG+V+K + LDG AIK G++ +A EV +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI---MIDVALALE 329
H ++V+ S+ + + + EY GSL + + I+ F+ + ++ V L
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 330 YLHFGYSNPVVHCDIKPSNVLL 351
Y+H S +VH DIKPSN+ +
Sbjct: 126 YIH---SMSLVHMDIKPSNIFI 144
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHLQ--FDGALKSFDAECEVLK-- 269
+AT + + IG+G++GTVYK R G VA+K + +G S E +L+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 270 -SVRHRNLVKIISSCSNGNFE-----ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
+ H N+V+++ C+ + LV E++ + L +M
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
L++LH +N +VH D+KP N+L+ L+DFG+A++ + + ++ + T+
Sbjct: 121 FLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-FPVVVTLW 176
Query: 384 YGREGQVSPKS------DVYGYGITLIETFTKKKPTCEIFC 418
Y R +V +S D++ G E F +K +FC
Sbjct: 177 Y-RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP----LFC 212
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 148 SCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 225 LIGIGSFGTVYKGRFLDG--------MEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
++G G +G V++ R + G M+V K ++ AE +L+ V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
V +I + G L+LEY++ G L L GI + ++++AL +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTACFYLAEISMALGHLH---Q 139
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTL-----ATIEY 384
+++ D+KP N++L+ L+DFG+ KES+ T+ TIEY
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLC-----KESIHDGTVTHXFCGTIEY 187
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 195
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 151
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 187
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 150 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 19/216 (8%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS----FDAECE 266
++L + + + +IG G+FG V R +V +F+ +S F E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 267 VLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
++ +V++ + + + +V+EYM G L L S+ + + + R +V L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVL 184
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT-LATIEY- 384
AL+ +H S +H D+KP N+LLD L+DFG +N + +R T + T +Y
Sbjct: 185 ALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 385 --------GREGQVSPKSDVYGYGITLIETFTKKKP 412
G +G + D + G+ L E P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ M VAIK + D + F E ++ H ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ + L DFG+++ + GK ++ +I + R +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR---FT 190
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 191 SASDVWMFGVCMWE 204
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 195
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 21/161 (13%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSF-DAECEVLKSVRHRNLV 277
+++ +IG GSFG VY+ + D E VAIK G K+F + E ++++ + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 278 KI----ISSCSNGN--FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALE 329
++ SS + + LVL+Y+ + S L + M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 330 YLH-FGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368
Y+H FG + H DIKP N+LLD D V L DFG AK L
Sbjct: 137 YIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIK---VFHLQFDGALKSFDAECEV--- 267
+AT + + IG+G++GTVYK R G VA+K V + G EV
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 268 --LKSVRHRNLVKIISSCSNGNFE-----ALVLEYMANGSLEKCLYSSNGILDIFQRLSI 320
L++ H N+V+++ C+ + LV E++ + L +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 321 MIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLA 380
M L++LH +N +VH D+KP N+L+ L+DFG+A++ + + ++ T +
Sbjct: 126 MRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL-TPVVV 181
Query: 381 TIEYGREGQVSPKS------DVYGYGITLIETFTKKKPTCEIFC 418
T+ Y R +V +S D++ G E F +K +FC
Sbjct: 182 TLWY-RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP----LFC 220
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV---R 272
T F E IG G FG+V+K + LDG AIK G++ +A EV +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI---MIDVALALE 329
H ++V+ S+ + + + EY GSL + + I+ F+ + ++ V L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 330 YLHFGYSNPVVHCDIKPSNVLL 351
Y+H S +VH DIKPSN+ +
Sbjct: 130 YIH---SMSLVHMDIKPSNIFI 148
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 226 IGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS 284
IG GS G V R G +VA+K+ L+ + E +++ +H N+V++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344
G +++E++ G+L + S L+ Q ++ V AL YLH + V+H DI
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 345 KPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS------DVYG 398
K ++LL D LSDFG ++ K+ + + L Y +V +S D++
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 399 YGITLIETFTKKKP 412
GI +IE + P
Sbjct: 227 LGIMVIEMVDGEPP 240
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV---R 272
T F E IG G FG+V+K + LDG AIK G++ +A EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI---MIDVALALE 329
H ++V+ S+ + + + EY GSL + + I+ F+ + ++ V L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 330 YLHFGYSNPVVHCDIKPSNVLL 351
Y+H S +VH DIKPSN+ +
Sbjct: 128 YIH---SMSLVHMDIKPSNIFI 146
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGA---LKSFDAECEVLKSV-RH 273
+G G+FG V K + + + VA+K+ L+ D L +E E++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 195
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY+ G + L + R + L EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 215
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNL 276
F KSL+G G++G V E VAIK FD L + E ++LK +H N+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENI 71
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYS--SNGILDIFQRLSIMIDVALALEYLHFG 334
+ I + +FE Y+ ++ L+ S +L + A++ LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH-- 129
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN----------GKESMRTQTLATIEY 384
+ V+H D+KPSN+L++ + + DFG+A++++ G++S T+ +AT Y
Sbjct: 130 -GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 385 G------REGQVSPKSDVYGYGITLIETFTKK 410
+ S DV+ G L E F ++
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++EY + G+L + L Y N + + F+ L
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 153 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 14/218 (6%)
Query: 218 DHFSEKSLIGIGSFGTVY-KGRFLDGMEVAIKVFHLQFDGA-LKSFDAECEVLKSVRHRN 275
D F K +G G+FG V+ G+E IK + ++ +AE EVLKS+ H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNG---ILDIFQRLSIMIDVALALEYLH 332
++KI + + +V+E G L + + S+ L +M + AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 333 FGYSNPVVHCDIKPSNVLLDD---DMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE-- 387
S VVH D+KP N+L D + DFG+A+L E + E
Sbjct: 142 ---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF 198
Query: 388 -GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLK 424
V+ K D++ G+ + T P EE+ K
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK 236
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 25/167 (14%)
Query: 252 LQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL--VLEYMANGSLEKCLYSSN 309
+Q G ++ E +LK + H N+VK++ + N + L V E + G + + +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTL 131
Query: 310 GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369
L Q D+ +EYLH+ ++H DIKPSN+L+ +D ++DFG++
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 370 GKESMRTQTLATIEYGREGQVSPKS-------------DVYGYGITL 403
G +++ + T+ T + ++P+S DV+ G+TL
Sbjct: 189 GSDALLSNTVGTPAF-----MAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY G + L + R + L EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+++D ++DFG AK + G+
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR 194
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 28/228 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 127
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPI 433
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 188 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 31/206 (15%)
Query: 229 GSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEV--LKSVRHRNLVKIISSCSNG 286
G FG V+K + L+ VA+K+F +Q +S+ E EV L ++H N+++ I + G
Sbjct: 35 GRFGCVWKAQLLNEY-VAVKIFPIQDK---QSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 287 NFE----ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF-------GY 335
L+ + GSL L ++ ++ + I +A L YLH G+
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIA-KLLNGKESMRTQ-TLATIEYGR----EGQ 389
+ H DIK NVLL +++ A ++DFG+A K GK + T + T Y EG
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208
Query: 390 VSPKS------DVYGYGITLIETFTK 409
++ + D+Y G+ L E ++
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELASR 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 28/228 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPI 433
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 187 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 225 LIGIGSFGTVYKGRFLD-GMEVAIKVFH-LQFDGALKSFDAECEVLKSVRHRNLVKI--I 280
++G G+ V++GR G AIKVF+ + F + E EVLK + H+N+VK+ I
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQR--LSIMIDVALALEYLHFGYSNP 338
+ + L++E+ GSL L + + + L ++ DV + +L N
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENG 132
Query: 339 VVHCDIKPSNVLL----DDDMVAHLSDFGIAKLLNGKESM 374
+VH +IKP N++ D V L+DFG A+ L E
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVY----KGRFLDGMEVAIKVFHLQFDGALKS---FDAE 264
E +A + + +G GSFG VY KG D E + + + +++ F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-----SNGILDIFQRLS 319
V+K ++V+++ S G +++E M G L+ L S N + LS
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 320 IMI----DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL------- 368
MI ++A + YL+ +N VH D+ N + +D + DFG+ + +
Sbjct: 126 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 369 NGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + + E ++G + SDV+ +G+ L E T
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNL 276
F KSL+G G++G V E VAIK FD L + E ++LK +H N+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENI 71
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYS--SNGILDIFQRLSIMIDVALALEYLHFG 334
+ I + +FE Y+ ++ L+ S +L + A++ LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH-- 129
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN----------GKESMRTQTLATIEY 384
+ V+H D+KPSN+L++ + + DFG+A++++ G++S T+ +AT Y
Sbjct: 130 -GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 385 G------REGQVSPKSDVYGYGITLIETFTKK 410
+ S DV+ G L E F ++
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 187 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 125
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 186 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 233
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ M VAIK + D + F E ++ H ++VK+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ + L DFG+++ + GK ++ +I + R +
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR---FT 570
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 571 SASDVWMFGVCMWE 584
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 127
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 188 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 127
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 188 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 127
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 188 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 187 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + +VA+K+ L+ D K +E E++K + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLS----- 319
+N++ ++ +C+ +++EY + G+L + L +S N + ++LS
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 320 -IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
VA +EYL S +H D+ NVL+ +D V ++DFG+A+ ++ + + T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ L E FT
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 127
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 188 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 80/184 (43%), Gaps = 26/184 (14%)
Query: 269 KSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVA 325
K + H N+VK GN + L LEY + G L + G+ + QR +M V
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 326 LALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIE 383
YLH G + H DIKP N+LLD+ +SDFG+A + N +E + + T+
Sbjct: 119 ----YLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 384 Y-------GREGQVSPKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDF 430
Y RE P DV+ GI L + P +C+ + + K ++N +
Sbjct: 172 YVAPELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW 230
Query: 431 LPIS 434
I
Sbjct: 231 KKID 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
L K+ S + + +V+EY G + L + R + L EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+++D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR 195
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 187 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGA--LKSFDAECEVLKSVRH 273
+D++ K +G G+F V + G+E A K+ + + A + + E + + ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALAL 328
N+V++ S +F LV + + G L + YS Q++ L
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI---------L 138
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDD---MVAHLSDFGIAKLLNGKESMR----TQTLAT 381
E + + +SN +VH ++KP N+LL L+DFG+A +N E+ T +
Sbjct: 139 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLS 198
Query: 382 IEYGREGQVSPKSDVYGYGITL 403
E ++ S D++ G+ L
Sbjct: 199 PEVLKKDPYSKPVDIWACGVIL 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 187 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + +VA+K+ L+ D K +E E++K + +H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLS----- 319
+N++ ++ +C+ +++EY + G+L + L Y N + ++LS
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 320 -IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
VA +EYL S +H D+ NVL+ +D V ++DFG+A+ ++ + + T
Sbjct: 139 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ L E FT
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 187 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ M VAIK + D + F E ++ H ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ L DFG+++ + GK ++ +I + R +
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR---FT 190
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 191 SASDVWMFGVCMWE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 127
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 188 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVF---HLQFDGALKSFDAECEVLKSVR 272
+D + + ++G GSFG V + + G E A+KV ++ +S E ++LK +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
H N++K+ + + LV E G L + S ++ I+ V + Y+H
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYMH 149
Query: 333 FGYSNPVVHCDIKPSNVLLD---DDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE-- 387
N +VH D+KP N+LL+ D + DFG++ + M+ + E
Sbjct: 150 ---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 206
Query: 388 -GQVSPKSDVYGYGITL 403
G K DV+ G+ L
Sbjct: 207 HGTYDEKCDVWSTGVIL 223
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 187 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 264 ECEVLKSVR-HRNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQR 317
E ++L+ V H N++++ + F LV + M G L EK S I +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 318 LSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT 376
L ++V AL L+ +VH D+KP N+LLDDDM L+DFG + L+ E +R+
Sbjct: 133 L---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS 182
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 187 P-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 234
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFH---LQFDGALKSFDAECEVLKSVRHRNLVKIIS 281
+G GSFG V G +VA+K+ + L + E L+ +RH +++K+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 282 SCSNGNFEALVLEYMANGSLEKCL----YSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ + +V+EY N + + S FQ+ + A+EY H +
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 122
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS------ 391
+VH D+KP N+LLD+ + ++DFG++ ++ ++T + + Y +S
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAG 181
Query: 392 PKSDVYGYGITLIETFTKKKP 412
P+ DV+ G+ L ++ P
Sbjct: 182 PEVDVWSCGVILYVMLCRRLP 202
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDGMEV--AIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
+++ ++ IG GS+G V K G + A K F + F E E++KS+ H N+
Sbjct: 10 YYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 277 VKIISSCSNGNFEALVLEYMANGSL-EKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
+++ + + LV+E G L E+ ++ + IM DV A+ Y H
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCH--- 123
Query: 336 SNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR----EG 388
V H D+KP N L D L DFG+A + MRT+ + T Y EG
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQVLEG 182
Query: 389 QVSPKSDVYGYGITL 403
P+ D + G+ +
Sbjct: 183 LYGPECDEWSAGVMM 197
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 219 HFSEKSLIGIGSFGTVYKGRFLDGMEV--AIKVFHLQFDGALKSFDAECEVLKSVRHRNL 276
+++ ++ IG GS+G V K G + A K F + F E E++KS+ H N+
Sbjct: 27 YYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 277 VKIISSCSNGNFEALVLEYMANGSL-EKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
+++ + + LV+E G L E+ ++ + IM DV A+ Y H
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCH--- 140
Query: 336 SNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR----EG 388
V H D+KP N L D L DFG+A + MRT+ + T Y EG
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-VGTPYYVSPQVLEG 199
Query: 389 QVSPKSDVYGYGITL 403
P+ D + G+ +
Sbjct: 200 LYGPECDEWSAGVMM 214
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ + VAIK + D + F E ++ H ++VK+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ + L DFG+++ + GK ++ +I + R +
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR---FT 190
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 191 SASDVWMFGVCMWE 204
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 15/118 (12%)
Query: 264 ECEVLKSVR-HRNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQR 317
E ++L+ V H N++++ + F LV + M G L EK S I +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 318 LSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR 375
L ++V AL L+ +VH D+KP N+LLDDDM L+DFG + L+ E +R
Sbjct: 120 L---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 168
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ + VAIK + D + F E ++ H ++VK+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ + L DFG+++ + GK ++ +I + R +
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR---FT 218
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 219 SASDVWMFGVCMWE 232
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFH---LQFDGALKSFDAECEVLKSVRHRNLVKIIS 281
+G GSFG V G +VA+K+ + L + E L+ +RH +++K+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 282 SCSNGNFEALVLEYMANGSLEKCL----YSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ + +V+EY N + + S FQ+ + A+EY H +
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 132
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS------ 391
+VH D+KP N+LLD+ + ++DFG++ ++ ++T + + Y +S
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAG 191
Query: 392 PKSDVYGYGITLIETFTKKKP 412
P+ DV+ G+ L ++ P
Sbjct: 192 PEVDVWSCGVILYVMLCRRLP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFH---LQFDGALKSFDAECEVLKSVRHRNLVKIIS 281
+G GSFG V G +VA+K+ + L + E L+ +RH +++K+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 282 SCSNGNFEALVLEYMANGSLEKCL----YSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ + +V+EY N + + S FQ+ + A+EY H +
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 131
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS------ 391
+VH D+KP N+LLD+ + ++DFG++ ++ ++T + + Y +S
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAG 190
Query: 392 PKSDVYGYGITLIETFTKKKP 412
P+ DV+ G+ L ++ P
Sbjct: 191 PEVDVWSCGVILYVMLCRRLP 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ + VAIK + D + F E ++ H ++VK+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ + L DFG+++ + GK ++ +I + R +
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR---FT 187
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 188 SASDVWMFGVCMWE 201
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGA--LKSFDAECEVLKSVRH 273
+D++ K +G G+F V + G+E A K+ + + A + + E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALAL 328
N+V++ S +F LV + + G L + YS Q++ L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI---------L 115
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDD---MVAHLSDFGIAKLLNGKESMR----TQTLAT 381
E + + +SN +VH ++KP N+LL L+DFG+A +N E+ T +
Sbjct: 116 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLS 175
Query: 382 IEYGREGQVSPKSDVYGYGITL 403
E ++ S D++ G+ L
Sbjct: 176 PEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGA--LKSFDAECEVLKSVRH 273
+D++ K +G G+F V + G+E A K+ + + A + + E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALAL 328
N+V++ S +F LV + + G L + YS Q++ L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI---------L 115
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDD---MVAHLSDFGIAKLLNGKESMR----TQTLAT 381
E + + +SN +VH ++KP N+LL L+DFG+A +N E+ T +
Sbjct: 116 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLS 175
Query: 382 IEYGREGQVSPKSDVYGYGITL 403
E ++ S D++ G+ L
Sbjct: 176 PEVLKKDPYSKPVDIWACGVIL 197
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISS- 282
IG G FG V++G++ G EVA+K+F + + +S+ E E+ ++V RH N++ I++
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 283 -CSNGNFEALVL--EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF----GY 335
NG + L L +Y +GSL Y + + + + + + A L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 336 SNPVV-HCDIKPSNVLLDDDMVAHLSDFGIA 365
P + H D+K N+L+ + ++D G+A
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + +VA+K+ L+ D K +E E++K + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLS----- 319
+N++ ++ +C+ +++EY + G+L + L Y N + ++LS
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 320 -IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
VA +EYL S +H D+ NVL+ +D V ++DFG+A+ ++ + + T
Sbjct: 154 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ L E FT
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISS- 282
IG G FG V++G++ G EVA+K+F + + +S+ E E+ ++V RH N++ I++
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 283 -CSNGNFEALVL--EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF----GY 335
NG + L L +Y +GSL Y + + + + + + A L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 336 SNPVV-HCDIKPSNVLLDDDMVAHLSDFGIA 365
P + H D+K N+L+ + ++D G+A
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGA--LKSFDAECEVLKSVRH 273
+D++ K +G G+F V + G+E A K+ + + A + + E + + ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALAL 328
N+V++ S +F LV + + G L + YS Q++ L
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI---------L 114
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDD---MVAHLSDFGIAKLLNGKESMR----TQTLAT 381
E + + +SN +VH ++KP N+LL L+DFG+A +N E+ T +
Sbjct: 115 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLS 174
Query: 382 IEYGREGQVSPKSDVYGYGITL 403
E ++ S D++ G+ L
Sbjct: 175 PEVLKKDPYSKPVDIWACGVIL 196
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 24/201 (11%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFH---LQFDGALKSFDAECEVLKSVRHRNLVKIIS 281
+G GSFG V G +VA+K+ + L + E L+ +RH +++K+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 282 SCSNGNFEALVLEYMANGSLEKCL----YSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ + +V+EY N + + S FQ+ + A+EY H +
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 126
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS------ 391
+VH D+KP N+LLD+ + ++DFG++ ++ ++T + + Y +S
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAG 185
Query: 392 PKSDVYGYGITLIETFTKKKP 412
P+ DV+ G+ L ++ P
Sbjct: 186 PEVDVWSCGVILYVMLCRRLP 206
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
L K+ S + + +V+EY G + L + R + L EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+++D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR 195
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++ Y + G+L + L Y N + + F+ L
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ + VAIK + D + F E ++ H ++VK+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ + L DFG+++ + GK ++ +I + R +
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR---FT 193
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 194 SASDVWMFGVCMWE 207
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRF-LDGMEVAIKVFHLQFDGA--LKSFDAECEVLKSVRHR 274
D + IG G++G V R L G +VAIK FD K E ++LK +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 275 NLVKIIS----SCSNGNFEAL--VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
N++ I + G F+++ VL+ M L + ++SS L + + + L
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHVRYFLYQLLRGL 171
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368
+Y+H S V+H D+KPSN+L++++ + DFG+A+ L
Sbjct: 172 KYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ + VAIK + D + F E ++ H ++VK+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ + L DFG+++ + GK ++ +I + R +
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR---FT 192
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 193 SASDVWMFGVCMWE 206
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 15/118 (12%)
Query: 264 ECEVLKSVR-HRNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQR 317
E ++L+ V H N++++ + F LV + M G L EK S I +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 318 LSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR 375
L ++V AL L+ +VH D+KP N+LLDDDM L+DFG + L+ E +R
Sbjct: 133 L---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRF-LDGMEVAIKVFHLQFDGA--LKSFDAECEVLKSVRHR 274
D + IG G++G V R L G +VAIK FD K E ++LK +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 275 NLVKII----SSCSNGNFEAL--VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
N++ I + G F+++ VL+ M L + ++SS L + + + L
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHVRYFLYQLLRGL 172
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368
+Y+H S V+H D+KPSN+L++++ + DFG+A+ L
Sbjct: 173 KYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ + VAIK + D + F E ++ H ++VK+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ + L DFG+++ + GK ++ +I + R +
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR---FT 195
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 196 SASDVWMFGVCMWE 209
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 33/159 (20%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISS- 282
IG G FG V++G++ G EVA+K+F + + +S+ E E+ ++V RH N++ I++
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 283 -CSNGNFEALVL--EYMANGSLEKCLYSSNGILDIFQRLSI----MIDVALA----LEYL 331
NG + L L +Y +GSL D R ++ MI +AL+ L +L
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSL----------FDYLNRYTVTVEGMIKLALSTASGLAHL 122
Query: 332 HF----GYSNPVV-HCDIKPSNVLLDDDMVAHLSDFGIA 365
H P + H D+K N+L+ + ++D G+A
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + ++ G A+K+ Q LK + E +L++V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
L K+ S + + +V+EY G + L + R + L EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+++D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR 195
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 33/159 (20%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISS- 282
IG G FG V++G++ G EVA+K+F + + +S+ E E+ ++V RH N++ I++
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 283 -CSNGNFEALVL--EYMANGSLEKCLYSSNGILDIFQRLSI----MIDVALA----LEYL 331
NG + L L +Y +GSL D R ++ MI +AL+ L +L
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSL----------FDYLNRYTVTVEGMIKLALSTASGLAHL 119
Query: 332 HF----GYSNPVV-HCDIKPSNVLLDDDMVAHLSDFGIA 365
H P + H D+K N+L+ + ++D G+A
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 33/159 (20%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISS- 282
IG G FG V++G++ G EVA+K+F + + +S+ E E+ ++V RH N++ I++
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 283 -CSNGNFEALVL--EYMANGSLEKCLYSSNGILDIFQRLSI----MIDVALA----LEYL 331
NG + L L +Y +GSL D R ++ MI +AL+ L +L
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSL----------FDYLNRYTVTVEGMIKLALSTASGLAHL 117
Query: 332 HF----GYSNPVV-HCDIKPSNVLLDDDMVAHLSDFGIA 365
H P + H D+K N+L+ + ++D G+A
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 33/159 (20%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISS- 282
IG G FG V++G++ G EVA+K+F + + +S+ E E+ ++V RH N++ I++
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 283 -CSNGNFEALVL--EYMANGSLEKCLYSSNGILDIFQRLSI----MIDVALA----LEYL 331
NG + L L +Y +GSL D R ++ MI +AL+ L +L
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSL----------FDYLNRYTVTVEGMIKLALSTASGLAHL 116
Query: 332 HF----GYSNPVV-HCDIKPSNVLLDDDMVAHLSDFGIA 365
H P + H D+K N+L+ + ++D G+A
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E +L++V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +V+EY G + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+++D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR 195
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 217 TDHFSEKSLIGIGSFGTVY--KGRFLDGMEVAIKVF---HLQFDGALKSFDAECEVLKSV 271
+D + + ++G GSFG V K + + G E A+KV ++ +S E ++LK +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 272 RHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
H N++K+ + + LV E G L + S ++ I+ V + Y+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 332 HFGYSNPVVHCDIKPSNVLLD---DDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE- 387
H N +VH D+KP N+LL+ D + DFG++ + M+ + E
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 199
Query: 388 --GQVSPKSDVYGYGITL 403
G K DV+ G+ L
Sbjct: 200 LHGTYDEKCDVWSTGVIL 217
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 23/209 (11%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDAECEVL-KSVRHR 274
TD + K IG+GS+ + ME A+K+ D + + E E+L + +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII----DKSKRDPTEEIEILLRYGQHP 76
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSL-EKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
N++ + +G + +V E M G L +K L + +++ + +EYLH
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLH- 133
Query: 334 GYSNPVVHCDIKPSNVLLDDDM----VAHLSDFGIAKLLNGKESMRTQTLATIEY----- 384
+ VVH D+KPSN+L D+ + DFG AK L + + T +
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEV 191
Query: 385 -GREGQVSPKSDVYGYGITLIETFTKKKP 412
R+G D++ G+ L T P
Sbjct: 192 LERQG-YDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVFHLQFDGALKS---FDAECEVLKSVRHRNLVK 278
+G GSFG VY+G D E + V + +L+ F E V+K ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD---------IFQRLSIMIDVALALE 329
++ S G +V+E MA+G L+ L S + + + + + ++A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--------NGKESMRTQTLAT 381
YL+ + VH D+ N ++ D + DFG+ + + GK + + +A
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 382 IEYGREGQVSPKSDVYGYGITLIE 405
E ++G + SD++ +G+ L E
Sbjct: 199 -ESLKDGVFTTSSDMWSFGVVLWE 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVF-HLQFDGALKSFDAECEVLKSVRHRNLVKII 280
IG G FG V++G ++ M VAIK + D + F E ++ H ++VK+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ N +++E G L L LD+ + ++ AL YL S V
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NGKESMRTQTLATIEYGREGQVS 391
H DI NVL+ L DFG+++ + GK ++ +I + R +
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR---FT 570
Query: 392 PKSDVYGYGITLIE 405
SDV+ +G+ + E
Sbjct: 571 SASDVWMFGVCMWE 584
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALE 329
H N+VK GN + L LEY + G L + G+ + QR +M V
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV---- 119
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY--- 384
YLH G + H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y
Sbjct: 120 YLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 385 ----GREGQVSPKSDVYGYGITLIETFTKKKP------TCEIFCEEMNLKNWVNDFLPIS 434
RE P DV+ GI L + P +C+ + + K ++N + I
Sbjct: 177 ELLKRREFHAEP-VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVFHLQFDGALKS---FDAECEVLKSVRHRNLVK 278
+G GSFG VY+G D E + V + +L+ F E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD---------IFQRLSIMIDVALALE 329
++ S G +V+E MA+G L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--------NGKESMRTQTLAT 381
YL+ + VH D+ N ++ D + DFG+ + + GK + + +A
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 382 IEYGREGQVSPKSDVYGYGITLIE 405
E ++G + SD++ +G+ L E
Sbjct: 202 -ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVFHLQFDGALKS---FDAECEVLKSVRHRNLVK 278
+G GSFG VY+G D E + V + +L+ F E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD---------IFQRLSIMIDVALALE 329
++ S G +V+E MA+G L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--------NGKESMRTQTLAT 381
YL+ + VH D+ N ++ D + DFG+ + + GK + + +A
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 382 IEYGREGQVSPKSDVYGYGITLIE 405
E ++G + SD++ +G+ L E
Sbjct: 202 -ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 22/201 (10%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283
+G G++G V + VA+K+ ++ ++ E + K + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDI-FQRL--SIMIDVALALEYLHFGYSNPVV 340
GN + L LEY + G L + G+ + QR +M V YLH G +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH-GIG--IT 126
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMRTQTLATIEY-------GREGQVS 391
H DIKP N+LLD+ +SDFG+A + N +E + + T+ Y RE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 392 PKSDVYGYGITLIETFTKKKP 412
P DV+ GI L + P
Sbjct: 187 P-VDVWSCGIVLTAMLAGELP 206
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISSC 283
+G G +G V++G + G VA+K+F + + KS+ E E+ +V RH N++ I+S
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 100
Query: 284 SNGNFEA----LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH---FGYS 336
+ L+ Y GSL L + LD L I++ +A L +LH FG
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 337 N--PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPK 393
+ H D+K N+L+ + ++D G+A M +Q+ ++ G +V K
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-------VMHSQSTNQLDVGNNPRVGTK 210
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 221 SEKSLIGIGSFGTVYK-GRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKI 279
S+ ++G G FG V+K G+++A K+ + + E V+ + H NL+++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPV 339
+ + N LV+EY+ G L + + L + M + + ++H Y +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---I 208
Query: 340 VHCDIKPSNVLL--DDDMVAHLSDFGIAKLLNGKESMR 375
+H D+KP N+L D + DFG+A+ +E ++
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK 246
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 103/217 (47%), Gaps = 39/217 (17%)
Query: 226 IGIGSFGTVY--------KGRFLDGMEVAIKVFHLQFDGALKSFD---AECEVLKSV-RH 273
+G G+FG V K + + + VA+K+ L+ D K +E E++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----------YSSNGILD---IFQRL- 318
+N++ ++ +C+ +++ Y + G+L + L Y N + + F+ L
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378
S +A +EYL S +H D+ NVL+ ++ V ++DFG+A+ +N + + T
Sbjct: 161 SCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 379 LATI-------EYGREGQVSPKSDVYGYGITLIETFT 408
+ E + + +SDV+ +G+ + E FT
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVFHLQFDGALKS---FDAECEVLKSVRHRNLVK 278
+G GSFG VY+G D E + V + +L+ F E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD---------IFQRLSIMIDVALALE 329
++ S G +V+E MA+G L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--------NGKESMRTQTLAT 381
YL+ + VH D+ N ++ D + DFG+ + + GK + + +A
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 382 IEYGREGQVSPKSDVYGYGITLIE 405
E ++G + SD++ +G+ L E
Sbjct: 202 -ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISSC 283
+G G +G V++G + G VA+K+F + + KS+ E E+ +V RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 71
Query: 284 SNGNFEA----LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH---FGYS 336
+ L+ Y GSL L + LD L I++ +A L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 337 N--PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPK 393
+ H D+K N+L+ + ++D G+A M +Q+ ++ G +V K
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-------VMHSQSTNQLDVGNNPRVGTK 181
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVFHLQFDGALKS---FDAECEVLKSVRHRNLVK 278
+G GSFG VY+G D E + V + +L+ F E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD---------IFQRLSIMIDVALALE 329
++ S G +V+E MA+G L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--------NGKESMRTQTLAT 381
YL+ + VH D+ N ++ D + DFG+ + + GK + + +A
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 382 IEYGREGQVSPKSDVYGYGITLIE 405
E ++G + SD++ +G+ L E
Sbjct: 202 -ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISSC 283
+G G +G V++G + G VA+K+F + + KS+ E E+ +V RH N++ I+S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 71
Query: 284 SNGNFEA----LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH---FGYS 336
+ L+ Y GSL L + LD L I++ +A L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 337 N--PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPK 393
+ H D+K N+L+ + ++D G+A M +Q+ ++ G +V K
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLA-------VMHSQSTNQLDVGNNPRVGTK 181
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 217 TDHFSEKSLIGIGSFGTVY--KGRFLDGMEVAIKVF---HLQFDGALKSFDAECEVLKSV 271
+D + + ++G GSFG V K + + G E A+KV ++ +S E ++LK +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 272 RHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
H N++K+ + + LV E G L + S ++ I+ V + Y+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 165
Query: 332 HFGYSNPVVHCDIKPSNVLLD---DDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE- 387
H N +VH D+KP N+LL+ D + DFG++ + M+ + E
Sbjct: 166 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 222
Query: 388 --GQVSPKSDVYGYGITL 403
G K DV+ G+ L
Sbjct: 223 LHGTYDEKCDVWSTGVIL 240
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
Query: 253 QFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSL------EKCLY 306
+ D AL + + E E+LK + H ++KI + ++ +VLE M G L K L
Sbjct: 54 EADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLK 111
Query: 307 SSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFG 363
+ L +Q L LA++YLH N ++H D+KP NVLL ++D + ++DFG
Sbjct: 112 EATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 161
Query: 364 IAKLLNGKESMRT 376
+K+L MRT
Sbjct: 162 HSKILGETSLMRT 174
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 217 TDHFSEKSLIGIGSFGTVY--KGRFLDGMEVAIKVF---HLQFDGALKSFDAECEVLKSV 271
+D + + ++G GSFG V K + + G E A+KV ++ +S E ++LK +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 272 RHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
H N++K+ + + LV E G L + S ++ I+ V + Y+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 166
Query: 332 HFGYSNPVVHCDIKPSNVLLD---DDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE- 387
H N +VH D+KP N+LL+ D + DFG++ + M+ + E
Sbjct: 167 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 223
Query: 388 --GQVSPKSDVYGYGITL 403
G K DV+ G+ L
Sbjct: 224 LHGTYDEKCDVWSTGVIL 241
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 226 IGIGSFGTVYK------GRFLDGMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + G+ ++VA+K+ H AL S E +++ + +H
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHE 102
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSL--------EKCLYSSNG-ILDIFQRLSIMIDVA 325
N+V ++ +C++G ++ EY G L E L +G L++ L VA
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 326 LALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNGKESMRTQ 377
+ +L S +H D+ NVLL + VA + DFG+A+ ++ G + +
Sbjct: 163 QGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+A E + + +SDV+ YGI L E F+
Sbjct: 220 WMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
Query: 253 QFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSL------EKCLY 306
+ D AL + + E E+LK + H ++KI + ++ +VLE M G L K L
Sbjct: 55 EADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLK 112
Query: 307 SSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFG 363
+ L +Q L LA++YLH N ++H D+KP NVLL ++D + ++DFG
Sbjct: 113 EATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Query: 364 IAKLLNGKESMRT 376
+K+L MRT
Sbjct: 163 HSKILGETSLMRT 175
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
Query: 253 QFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSL------EKCLY 306
+ D AL + + E E+LK + H ++KI + ++ +VLE M G L K L
Sbjct: 55 EADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLK 112
Query: 307 SSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFG 363
+ L +Q L LA++YLH N ++H D+KP NVLL ++D + ++DFG
Sbjct: 113 EATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Query: 364 IAKLLNGKESMRT 376
+K+L MRT
Sbjct: 163 HSKILGETSLMRT 175
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
Query: 253 QFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSL------EKCLY 306
+ D AL + + E E+LK + H ++KI + ++ +VLE M G L K L
Sbjct: 55 EADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLK 112
Query: 307 SSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFG 363
+ L +Q L LA++YLH N ++H D+KP NVLL ++D + ++DFG
Sbjct: 113 EATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162
Query: 364 IAKLLNGKESMRT 376
+K+L MRT
Sbjct: 163 HSKILGETSLMRT 175
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 225 LIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAEC------EVLKSVRHRNLVK 278
+IG GSFG V R EV V LQ LK + + +LK+V+H LV
Sbjct: 45 VIGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP 338
+ S + VL+Y+ G L L L+ R ++A AL YLH S
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SLN 159
Query: 339 VVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
+V+ D+KP N+LLD L+DFG+ K S + T EY
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEY 205
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 18/213 (8%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEV-AIKVFHLQFDGALKSFDAECEVLK- 269
++ L + F ++G GSFG V+ F + AIK L+ D L D EC +++
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEK 69
Query: 270 -----SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDV 324
+ H L + + V+EY+ G L + S + D+ + ++
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEI 128
Query: 325 ALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
L L++LH S +V+ D+K N+LLD D ++DFG+ K ++ + T +Y
Sbjct: 129 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDY 185
Query: 385 GRE----GQVSPKS-DVYGYGITLIETFTKKKP 412
GQ S D + +G+ L E + P
Sbjct: 186 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNL 276
F KSL+G G++G V E VAIK FD L + E ++LK +H N+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENI 71
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYS--SNGILDIFQRLSIMIDVALALEYLHFG 334
+ I + +FE Y+ ++ L+ S +L + A++ LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH-- 129
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN----------GKESMRTQTLATIEY 384
+ V+H D+KPSN+L++ + + DFG+A++++ G++S + +AT Y
Sbjct: 130 -GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 385 G------REGQVSPKSDVYGYGITLIETFTKK 410
+ S DV+ G L E F ++
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
Query: 253 QFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSL------EKCLY 306
+ D AL + + E E+LK + H ++KI + ++ +VLE M G L K L
Sbjct: 61 EADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLK 118
Query: 307 SSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFG 363
+ L +Q L LA++YLH N ++H D+KP NVLL ++D + ++DFG
Sbjct: 119 EATCKLYFYQML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 168
Query: 364 IAKLLNGKESMRT 376
+K+L MRT
Sbjct: 169 HSKILGETSLMRT 181
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVFHLQFDGALKS---FDAECEVLKSVRHRNLVK 278
+G GSFG VY+G D E + V + +L+ F E V+K ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD---------IFQRLSIMIDVALALE 329
++ S G +V+E MA+G L+ L S + + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--------NGKESMRTQTLAT 381
YL+ + VH D+ N ++ D + DFG+ + + GK + + +A
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 382 IEYGREGQVSPKSDVYGYGITLIE 405
E ++G + SD++ +G+ L E
Sbjct: 201 -ESLKDGVFTTSSDMWSFGVVLWE 223
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 28/218 (12%)
Query: 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEV-AIKVFHLQFDGALKSFDAECEVLK- 269
++ L + F ++G GSFG V+ F + AIK L+ D L D EC +++
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEK 68
Query: 270 -----SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDV 324
+ H L + + V+EY+ G L + S + D+ + ++
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEI 127
Query: 325 ALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
L L++LH S +V+ D+K N+LLD D ++DFG+ KE+M
Sbjct: 128 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMC-----KENMLGDAKTNXFC 179
Query: 385 GREGQVSPK----------SDVYGYGITLIETFTKKKP 412
G ++P+ D + +G+ L E + P
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 20/124 (16%)
Query: 262 DAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSL------EKCLYSSNGILDIF 315
+ E E+LK + H ++KI + ++ +VLE M G L K L + L +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 316 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKE 372
Q L LA++YLH N ++H D+KP NVLL ++D + ++DFG +K+L
Sbjct: 261 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 310
Query: 373 SMRT 376
MRT
Sbjct: 311 LMRT 314
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 20/124 (16%)
Query: 262 DAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSL------EKCLYSSNGILDIF 315
+ E E+LK + H ++KI + ++ +VLE M G L K L + L +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 316 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKE 372
Q L LA++YLH N ++H D+KP NVLL ++D + ++DFG +K+L
Sbjct: 247 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 296
Query: 373 SMRT 376
MRT
Sbjct: 297 LMRT 300
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDA---ECEVLKSVRH 273
D F +G GSFG V + + G A+K+ Q LK + E + ++V
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
LVK+ S + + +VLEY G + L + R + L EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371
S +++ D+KP N+L+D ++DFG AK + G+
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR 195
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 226 IGIGSFGTVYK------GRFLDGMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + G+ ++VA+K+ H AL S E +++ + +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHE 110
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSL--------EKCLYSSNG-ILDIFQRLSIMIDVA 325
N+V ++ +C++G ++ EY G L E L +G L++ L VA
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 326 LALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNGKESMRTQ 377
+ +L S +H D+ NVLL + VA + DFG+A+ ++ G + +
Sbjct: 171 QGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+A E + + +SDV+ YGI L E F+
Sbjct: 228 WMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 19/215 (8%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--------DGALKSFDAECEV 267
+ +S S +G G+FG V+ + EV +K + D L E +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
L V H N++K++ N F LV+E +G + LD I + A
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387
+ YL ++H DIK N+++ +D L DFG A L + T TIEY
Sbjct: 143 VGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FCGTIEYCAP 198
Query: 388 GQV------SPKSDVYGYGITLIETFTKKKPTCEI 416
+ P+ +++ G+TL ++ P CE+
Sbjct: 199 EVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL 233
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVF-HLQFDGA-LKSFDAECEVLKSVRHRNLVKIISS 282
IG G+F V R L G EVA+K+ Q + + L+ E + K + H N+VK+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
LV EY + G + L + + R + A++Y H + +VH
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHR 137
Query: 343 DIKPSNVLLDDDMVAHLSDFGIA 365
D+K N+LLD D ++DFG +
Sbjct: 138 DLKAENLLLDADXNIKIADFGFS 160
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 44/223 (19%)
Query: 220 FSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHL-QFDGALKSFDAECEVLKSVRHRNLV 277
F +G G FG V++ + +D AIK L + A + E + L + H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSS-------------NGILDIFQR-----LS 319
+ N E E + S + LY NG I +R L
Sbjct: 67 RYF----NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 320 IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTL 379
I + +A A+E+LH S ++H D+KPSN+ D V + DFG+ ++ E +T
Sbjct: 123 IFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 380 ATIEYGRE-GQV----------------SPKSDVYGYGITLIE 405
Y R GQV S K D++ G+ L E
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISSC 283
IG G +G V+ G++ G +VA+KVF F S+ E E+ ++V RH N++ I++
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 284 SNGNFEA----LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH---FGYS 336
G L+ +Y NGSL L S+ LD L + L +LH F
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 337 N--PVVHCDIKPSNVLLDDDMVAHLSDFGIA 365
+ H D+K N+L+ + ++D G+A
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 214 LLATDHFSEKSLIGIGSFG----TVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVL- 268
L+ +D + K IG+GS+ V+K ME A+KV D + + E E+L
Sbjct: 23 LVFSDGYVVKETIGVGSYSECKRCVHKA---TNMEYAVKVI----DKSKRDPSEEIEILL 75
Query: 269 KSVRHRNLVKIISSCSNGNFEALVLEYMANGSL-EKCLYSSNGILDIFQRLSIMIDVALA 327
+ +H N++ + +G LV E M G L +K L + ++ +
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKT 133
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDM----VAHLSDFGIAKLLNGKESM 374
+EYLH S VVH D+KPSN+L D+ + DFG AK L + +
Sbjct: 134 VEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 22/175 (12%)
Query: 210 YQELLLATDHFSEKSLIGIGSFG----TVYKGRFLDGMEVAIKVFHLQFDGALKSFDAEC 265
Y + ++ +D + K IG+GS+ V+K ME A+KV D + + E
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVI----DKSKRDPSEEI 71
Query: 266 EVL-KSVRHRNLVKIISSCSNGNFEALVLEYMANGSL-EKCLYSSNGILDIFQRLSIMID 323
E+L + +H N++ + +G LV E M G L +K L + ++
Sbjct: 72 EILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL--RQKFFSEREASFVLHT 129
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDM----VAHLSDFGIAKLLNGKESM 374
+ +EYLH S VVH D+KPSN+L D+ + DFG AK L + +
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 23/199 (11%)
Query: 220 FSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEV---LKSVRHRN 275
F S +G GS+G V+K R DG A+K F G EV K +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
V++ + G L E + SL++ + L Q + D LAL +LH
Sbjct: 119 CVRLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH--- 174
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPK-- 393
S +VH D+KP+N+ L L DFG+ L T ++ G ++P+
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG------TAGAGEVQEGDPRYMAPELL 228
Query: 394 -------SDVYGYGITLIE 405
+DV+ G+T++E
Sbjct: 229 QGSYGTAADVFSLGLTILE 247
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVFHLQFDGALKS---FDAECEVLKSVRHRNLVK 278
+G GSFG VY+G D E + V + +L+ F E V+K ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD---------IFQRLSIMIDVALALE 329
++ S G +V+E MA+G L+ L S + + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--------NGKESMRTQTLAT 381
YL+ + VH ++ N ++ D + DFG+ + + GK + + +A
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 382 IEYGREGQVSPKSDVYGYGITLIE 405
E ++G + SD++ +G+ L E
Sbjct: 202 -ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 226 IGIGSFGTVYKGRFLD----GMEVAIKVFHLQFDGALKS---FDAECEVLKSVRHRNLVK 278
+G GSFG VY+G D E + V + +L+ F E V+K ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD---------IFQRLSIMIDVALALE 329
++ S G +V+E MA+G L+ L S + + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--------NGKESMRTQTLAT 381
YL+ + VH ++ N ++ D + DFG+ + + GK + + +A
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 382 IEYGREGQVSPKSDVYGYGITLIE 405
E ++G + SD++ +G+ L E
Sbjct: 203 -ESLKDGVFTTSSDMWSFGVVLWE 225
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 226 IGIGSFGTVYKGRF--LDGMEVAIKVFHLQFD-----GALKSFDAECEVLKSVRHRNLVK 278
+G GSFG V +G + G V++ V L+ D A+ F E + S+ HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYS 336
+ + +V E GSL L G +L R ++ VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---S 133
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN-------------------GKESMRTQ 377
+H D+ N+LL + + DFG+ + L ES++T+
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
T S SD + +G+TL E FT
Sbjct: 194 TF-----------SHASDTWMFGVTLWEMFT 213
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 226 IGIGSFGTVYKGRF--LDGMEVAIKVFHLQFD-----GALKSFDAECEVLKSVRHRNLVK 278
+G GSFG V +G + G V++ V L+ D A+ F E + S+ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYS 336
+ + +V E GSL L G +L R ++ VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---S 129
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN-------------------GKESMRTQ 377
+H D+ N+LL + + DFG+ + L ES++T+
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
T S SD + +G+TL E FT
Sbjct: 190 TF-----------SHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 226 IGIGSFGTVYKGRF--LDGMEVAIKVFHLQFD-----GALKSFDAECEVLKSVRHRNLVK 278
+G GSFG V +G + G V++ V L+ D A+ F E + S+ HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYS 336
+ + +V E GSL L G +L R ++ VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---S 139
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN-------------------GKESMRTQ 377
+H D+ N+LL + + DFG+ + L ES++T+
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
T S SD + +G+TL E FT
Sbjct: 200 TF-----------SHASDTWMFGVTLWEMFT 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 226 IGIGSFGTVYKGRF--LDGMEVAIKVFHLQFD-----GALKSFDAECEVLKSVRHRNLVK 278
+G GSFG V +G + G V++ V L+ D A+ F E + S+ HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYS 336
+ + +V E GSL L G +L R ++ VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---S 139
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN-------------------GKESMRTQ 377
+H D+ N+LL + + DFG+ + L ES++T+
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
T S SD + +G+TL E FT
Sbjct: 200 TF-----------SHASDTWMFGVTLWEMFT 219
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 226 IGIGSFGTVYKGRFLD--GMEVAIKVFHLQF--DGALKSFDAECEVLK---SVRHRNLVK 278
IG G++G V+K R L G VA+K +Q +G S E VL+ + H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 279 IISSCSNGNFE-----ALVLEYMANG---SLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
+ C+ + LV E++ L+K I +M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI---KDMMFQLLRGLDF 135
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV 390
LH S+ VVH D+KP N+L+ L+DFG+A++ + + ++ T + T+ Y R +V
Sbjct: 136 LH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-TSVVVTLWY-RAPEV 190
Query: 391 SPKS------DVYGYGITLIETFTKK 410
+S D++ G E F +K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 226 IGIGSFGTVYKGRF--LDGMEVAIKVFHLQFD-----GALKSFDAECEVLKSVRHRNLVK 278
+G GSFG V +G + G V++ V L+ D A+ F E + S+ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYS 336
+ + +V E GSL L G +L R ++ VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---S 129
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN-------------------GKESMRTQ 377
+H D+ N+LL + + DFG+ + L ES++T+
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
T S SD + +G+TL E FT
Sbjct: 190 TF-----------SHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 226 IGIGSFGTVYKGRF--LDGMEVAIKVFHLQFD-----GALKSFDAECEVLKSVRHRNLVK 278
+G GSFG V +G + G V++ V L+ D A+ F E + S+ HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYS 336
+ + +V E GSL L G +L R ++ VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---S 133
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN-------------------GKESMRTQ 377
+H D+ N+LL + + DFG+ + L ES++T+
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
T S SD + +G+TL E FT
Sbjct: 194 TF-----------SHASDTWMFGVTLWEMFT 213
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 87/170 (51%), Gaps = 17/170 (10%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLDGME---VAIKVFHLQFDGAL--KSFDAECEVLKSVR 272
D + + LIG GS+G V + D +E VAIK F+ + K E +L +
Sbjct: 53 DRYEIRHLIGTGSYGHVCEA--YDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 273 HRNLVKIISSCSNGNFEA-----LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
H ++VK++ + E +VLE +A+ +K L+ + L +++ ++ +
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKK-LFRTPVYLTELHIKTLLYNLLVG 168
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ 377
++Y+H S ++H D+KP+N L++ D + DFG+A+ ++ E+ +Q
Sbjct: 169 VKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ 215
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 43/234 (18%)
Query: 204 MWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQ---------- 253
W+ Q + D F + ++G G FG V+ + M+ K++ +
Sbjct: 173 QWKWLEAQPM--GEDWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKR 226
Query: 254 --FDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI 311
+ GA+ E ++L V R +V + + LV+ M G + +Y+ +
Sbjct: 227 KGYQGAM----VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 312 LDIFQRLSIMIDVAL---ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368
FQ + A LE+LH +++ D+KP NVLLDDD +SD G+A L
Sbjct: 283 NPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 369 NGKESMRTQTLATIEYGREGQVSPK----------SDVYGYGITLIETFTKKKP 412
++ +T+ A G G ++P+ D + G+TL E + P
Sbjct: 340 KAGQT-KTKGYA----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 43/234 (18%)
Query: 204 MWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQ---------- 253
W+ Q + D F + ++G G FG V+ + M+ K++ +
Sbjct: 173 QWKWLEAQPM--GEDWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKR 226
Query: 254 --FDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI 311
+ GA+ E ++L V R +V + + LV+ M G + +Y+ +
Sbjct: 227 KGYQGAM----VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 312 LDIFQRLSIMIDVAL---ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368
FQ + A LE+LH +++ D+KP NVLLDDD +SD G+A L
Sbjct: 283 NPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 369 NGKESMRTQTLATIEYGREGQVSPK----------SDVYGYGITLIETFTKKKP 412
++ +T+ A G G ++P+ D + G+TL E + P
Sbjct: 340 KAGQT-KTKGYA----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 43/234 (18%)
Query: 204 MWRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQ---------- 253
W+ Q + D F + ++G G FG V+ + M+ K++ +
Sbjct: 173 QWKWLEAQPM--GEDWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKR 226
Query: 254 --FDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI 311
+ GA+ E ++L V R +V + + LV+ M G + +Y+ +
Sbjct: 227 KGYQGAM----VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 312 LDIFQRLSIMIDVAL---ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368
FQ + A LE+LH +++ D+KP NVLLDDD +SD G+A L
Sbjct: 283 NPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 369 NGKESMRTQTLATIEYGREGQVSPK----------SDVYGYGITLIETFTKKKP 412
++ +T+ A G G ++P+ D + G+TL E + P
Sbjct: 340 KAGQT-KTKGYA----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 43/233 (18%)
Query: 205 WRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQ----------- 253
W+ Q + D F + ++G G FG V+ + M+ K++ +
Sbjct: 174 WKWLEAQPM--GEDWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRK 227
Query: 254 -FDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGIL 312
+ GA+ E ++L V R +V + + LV+ M G + +Y+ +
Sbjct: 228 GYQGAM----VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 313 DIFQRLSIMIDVAL---ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369
FQ + A LE+LH +++ D+KP NVLLDDD +SD G+A L
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 370 GKESMRTQTLATIEYGREGQVSPK----------SDVYGYGITLIETFTKKKP 412
++ +T+ A G G ++P+ D + G+TL E + P
Sbjct: 341 AGQT-KTKGYA----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 226 IGIGSFGTVYKGRFLD--GMEVAIKVFHLQF--DGALKSFDAECEVLK---SVRHRNLVK 278
IG G++G V+K R L G VA+K +Q +G S E VL+ + H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 279 IISSCSNGNFE-----ALVLEYMANG---SLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
+ C+ + LV E++ L+K I +M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI---KDMMFQLLRGLDF 135
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV 390
LH S+ VVH D+KP N+L+ L+DFG+A++ + + ++ T + T+ Y R +V
Sbjct: 136 LH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-TSVVVTLWY-RAPEV 190
Query: 391 SPKS------DVYGYGITLIETFTKK 410
+S D++ G E F +K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 226 IGIGSFGTVYKGRF--LDGMEVAIKVFHLQFD-----GALKSFDAECEVLKSVRHRNLVK 278
+G GSFG V +G + G V++ V L+ D A+ F E + S+ HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYS 336
+ + +V E GSL L G +L R ++ VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---S 129
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN-------------------GKESMRTQ 377
+H D+ N+LL + + DFG+ + L ES++T+
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
T S SD + +G+TL E FT
Sbjct: 190 TF-----------SHASDTWMFGVTLWEMFT 209
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 24/198 (12%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRN 275
+D F +S +G G+ VY+ + + A+KV D K E VL + H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109
Query: 276 LVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALALEY 330
++K+ +LVLE + G L EK YS D ++ + A+ Y
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAVAY 163
Query: 331 LHFGYSNPVVHCDIKPSNVLLDD---DMVAHLSDFGIAKLLNGKESMR----TQTLATIE 383
LH N +VH D+KP N+L D ++DFG++K++ + M+ T E
Sbjct: 164 LH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPE 220
Query: 384 YGREGQVSPKSDVYGYGI 401
R P+ D++ GI
Sbjct: 221 ILRGCAYGPEVDMWSVGI 238
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 226 IGIGSFGTVYKGRFLD--GMEVAIKVFHLQF--DGALKSFDAECEVLK---SVRHRNLVK 278
IG G++G V+K R L G VA+K +Q +G S E VL+ + H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 279 IISSCSNGNFE-----ALVLEYMANG---SLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
+ C+ + LV E++ L+K I +M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI---KDMMFQLLRGLDF 135
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV 390
LH S+ VVH D+KP N+L+ L+DFG+A++ + + ++ T + T+ Y R +V
Sbjct: 136 LH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-TSVVVTLWY-RAPEV 190
Query: 391 SPKS------DVYGYGITLIETFTKK 410
+S D++ G E F +K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 28/171 (16%)
Query: 208 FSYQELLLATDHFSEKSL-IGIGSFGTVYKGRFLD---GMEVAIKVFHLQFDGALKSFDA 263
+ Y+E + H++ L +G GSFG V+ R D G + A+K L+ F A
Sbjct: 86 YEYREEV----HWATHQLRLGRGSFGEVH--RMEDKQTGFQCAVKKVRLEV------FRA 133
Query: 264 E----CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS 319
E C L S R +V + + G + + +E + GSL + L G L + L
Sbjct: 134 EELMACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALY 189
Query: 320 IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV-AHLSDFGIAKLLN 369
+ LEYLH S ++H D+K NVLL D A L DFG A L
Sbjct: 190 YLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ 237
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 41/217 (18%)
Query: 226 IGIGSFGTVYK------GRFLDGMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + G+ ++VA+K+ H AL S E +++ + +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHE 110
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLS------ 319
N+V ++ +C++G ++ EY G L L YS N + ++LS
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 320 IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNGK 371
VA + +L S +H D+ NVLL + VA + DFG+A+ ++ G
Sbjct: 171 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 372 ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ + +A E + + +SDV+ YGI L E F+
Sbjct: 228 ARLPVKWMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 28/171 (16%)
Query: 208 FSYQELLLATDHFSEKSL-IGIGSFGTVYKGRFLD---GMEVAIKVFHLQFDGALKSFDA 263
+ Y+E + H++ L +G GSFG V+ R D G + A+K L+ F A
Sbjct: 67 YEYREEV----HWATHQLRLGRGSFGEVH--RMEDKQTGFQCAVKKVRLEV------FRA 114
Query: 264 E----CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS 319
E C L S R +V + + G + + +E + GSL + L G L + L
Sbjct: 115 EELMACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALY 170
Query: 320 IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV-AHLSDFGIAKLLN 369
+ LEYLH S ++H D+K NVLL D A L DFG A L
Sbjct: 171 YLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQ-FDGALKSFDAECEVLKSVRHRN 275
D + + ++G G+F V + VAIK + +G S + E VL ++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 276 LVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILD-IFQRLSIMIDVALALE 329
+V + +G L+++ ++ G L EK Y+ IFQ L A++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVK 130
Query: 330 YLHFGYSNPVVHCDIKPSNVL---LDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR 386
YLH +VH D+KP N+L LD+D +SDFG++K+ + + T G
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC------GT 181
Query: 387 EGQVSPK 393
G V+P+
Sbjct: 182 PGYVAPE 188
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQ-FDGALKSFDAECEVLKSVRHRN 275
D + + ++G G+F V + VAIK + +G S + E VL ++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 276 LVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILD-IFQRLSIMIDVALALE 329
+V + +G L+++ ++ G L EK Y+ IFQ L A++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVK 130
Query: 330 YLHFGYSNPVVHCDIKPSNVL---LDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR 386
YLH +VH D+KP N+L LD+D +SDFG++K+ + + T G
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC------GT 181
Query: 387 EGQVSPK 393
G V+P+
Sbjct: 182 PGYVAPE 188
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%), Gaps = 42/222 (18%)
Query: 225 LIGIGSFGTVYKGRFLD------GMEVAIKVFHLQFDGALK-SFDAECEVLKSV-RHRNL 276
++G G+FG V ++VA+K+ + D + + + +E +++ + H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 277 VKIISSCSNGNFEALVLEYMANGSLEKCLYSSN----------------------GILDI 314
V ++ +C+ L+ EY G L L S +L
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 315 FQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-------- 366
L VA +E+L F VH D+ NVL+ V + DFG+A+
Sbjct: 172 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 367 LLNGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
++ G + + +A E EG + KSDV+ YGI L E F+
Sbjct: 229 VVRGNARLPVKWMAP-ESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKV-VVEINLSRNYLTGD 60
L L N+L ++ F L ++ + + N L +LP+ + + V + E+ L RN L
Sbjct: 66 LYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSL 124
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLK 120
P LT L LSL N LQ F +LTSL+ L L N L V + +KL LK
Sbjct: 125 PPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELK 184
Query: 121 DLNLSFNRLK 130
L L N+LK
Sbjct: 185 TLKLDNNQLK 194
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDI-ENMKVVVEINLSRNYLTGD 60
L L N+L S+ P F +L + N L SLP + + + + E+ L N L
Sbjct: 114 LRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRV 172
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPE-SFGELTSLESLDLSVN 103
LT L+ L L+NN+L+ +PE +F L L+ L L N
Sbjct: 173 PEGAFDKLTELKTLKLDNNQLKR-VPEGAFDSLEKLKMLQLQEN 215
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 24/221 (10%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD----GALKSFDAEC 265
+E+ L D F +IG G+F V + G A+K+ + ++D G + F E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN-KWDMLKRGEVSCFREER 112
Query: 266 EVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVA 325
+VL + R + ++ + + N+ LV+EY G L L + + ++
Sbjct: 113 DVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIV 172
Query: 326 LALEYLH-FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT-QTLATIE 383
+A++ +H GY VH DIKP N+LLD L+DFG L ++R+ + T +
Sbjct: 173 MAIDSVHRLGY----VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPD 228
Query: 384 Y------------GREGQVSPKSDVYGYGITLIETFTKKKP 412
Y G P+ D + G+ E F + P
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 91/196 (46%), Gaps = 21/196 (10%)
Query: 202 QAMWRRFSYQELLLAT----DHFSEKSLIGIGSFGTVYKGRFLDGMEVAI-KVFHLQFDG 256
+ +W+++ Q + + D++ +G G+FG V++ +E A +VF +F
Sbjct: 31 EDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRC-----VEKATGRVFVAKFIN 85
Query: 257 ALKSFDA-----ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGI 311
D E ++ + H L+ + + + L+LE+++ G L + + +
Sbjct: 86 TPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK 145
Query: 312 LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLS--DFGIAKLLN 369
+ + ++ M L+++H + +VH DIKP N++ + + + DFG+A LN
Sbjct: 146 MSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202
Query: 370 GKESMRTQTLATIEYG 385
E ++ T AT E+
Sbjct: 203 PDEIVKV-TTATAEFA 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQ-FDGALKSFDAECEVLKSVRHRN 275
D + + ++G G+F V + VAIK + +G S + E VL ++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 276 LVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILD-IFQRLSIMIDVALALE 329
+V + +G L+++ ++ G L EK Y+ IFQ L A++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVK 130
Query: 330 YLHFGYSNPVVHCDIKPSNVL---LDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR 386
YLH +VH D+KP N+L LD+D +SDFG++K+ + + T G
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC------GT 181
Query: 387 EGQVSPK 393
G V+P+
Sbjct: 182 PGYVAPE 188
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 226 IGIGSFGTVYKGRFLDG-MEVAIKVFHLQFDGALKS----FDAECEVLKSVRHRNLVKII 280
IG GSF TVYKG LD V + LQ KS F E E LK ++H N+V+
Sbjct: 34 IGRGSFKTVYKG--LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 281 ----SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
S+ LV E +G+L K + I S + L++LH +
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTL-KTYLKRFKVXKIKVLRSWCRQILKGLQFLH-TRT 149
Query: 337 NPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGR----EGQVS 391
P++H D+K N+ + + + D G+A L + S + T E+ E +
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL--KRASFAKAVIGTPEFXAPEXYEEKYD 207
Query: 392 PKSDVYGYGITLIETFTKKKPTCE 415
DVY +G +E T + P E
Sbjct: 208 ESVDVYAFGXCXLEXATSEYPYSE 231
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLDGME-VAIK-VFHLQFDGALKSFDAECEVLKSVRHRN 275
D + + ++G G+F V + VAIK + +G S + E VL ++H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 276 LVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILD-IFQRLSIMIDVALALE 329
+V + +G L+++ ++ G L EK Y+ IFQ L A++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVK 130
Query: 330 YLHFGYSNPVVHCDIKPSNVL---LDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGR 386
YLH +VH D+KP N+L LD+D +SDFG++K+ + + T G
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC------GT 181
Query: 387 EGQVSPK 393
G V+P+
Sbjct: 182 PGYVAPE 188
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHR 274
D + + +G G++G VYK + VAIK L+ + G + E +LK ++HR
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG 334
N++++ S + + L+ EY N L+K + + D+ R+ I + + ++F
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNP---DVSMRV-IKSFLYQLINGVNFC 148
Query: 335 YSNPVVHCDIKPSNVLL-----DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
+S +H D+KP N+LL + V + DFG+A+ T + T+ Y
Sbjct: 149 HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWY 203
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 220 FSEKSLIGIGSFGTVY------KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH 273
F L+G G+FG V GR+ M++ K + D + E VL++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYY-AMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 64
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
L + + + V+EY G L L + R ++ ALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQTLATI 382
S VV+ DIK N++LD D ++DFG+ K E + + L
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 383 EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
+YGR D +G G+ + E + P
Sbjct: 181 DYGR------AVDWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 220 FSEKSLIGIGSFGTVY------KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH 273
F L+G G+FG V GR+ M++ K + D + E VL++ RH
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYY-AMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 69
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
L + + + V+EY G L L + R ++ ALEYLH
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 127
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQTLATI 382
S VV+ DIK N++LD D ++DFG+ K E + + L
Sbjct: 128 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 383 EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
+YGR D +G G+ + E + P
Sbjct: 186 DYGR------AVDWWGLGVVMYEMMCGRLP 209
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 220 FSEKSLIGIGSFGTVY------KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH 273
F L+G G+FG V GR+ M++ K + D + E VL++ RH
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYY-AMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 67
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
L + + + V+EY G L L + R ++ ALEYLH
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 125
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQTLATI 382
S VV+ DIK N++LD D ++DFG+ K E + + L
Sbjct: 126 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 183
Query: 383 EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
+YGR D +G G+ + E + P
Sbjct: 184 DYGR------AVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 220 FSEKSLIGIGSFGTVY------KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH 273
F L+G G+FG V GR+ M++ K + D + E VL++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYY-AMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 64
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
L + + + V+EY G L L + R ++ ALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQTLATI 382
S VV+ DIK N++LD D ++DFG+ K E + + L
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 383 EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
+YGR D +G G+ + E + P
Sbjct: 181 DYGR------AVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 220 FSEKSLIGIGSFGTVY------KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH 273
F L+G G+FG V GR+ M++ K + D + E VL++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYY-AMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 64
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
L + + + V+EY G L L + R ++ ALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQTLATI 382
S VV+ DIK N++LD D ++DFG+ K E + + L
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 383 EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
+YGR D +G G+ + E + P
Sbjct: 181 DYGR------AVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 220 FSEKSLIGIGSFGTVY------KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH 273
F L+G G+FG V GR+ M++ K + D + E VL++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYY-AMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 64
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
L + + + V+EY G L L + R ++ ALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQTLATI 382
S VV+ DIK N++LD D ++DFG+ K E + + L
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 383 EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
+YGR D +G G+ + E + P
Sbjct: 181 DYGR------AVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 220 FSEKSLIGIGSFGTVY------KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH 273
F L+G G+FG V GR+ M++ K + D + E VL++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYY-AMKILRKEVIIAKDEVAHTV-TESRVLQNTRH 64
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
L + + + V+EY G L L + R ++ ALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQTLATI 382
S VV+ DIK N++LD D ++DFG+ K E + + L
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 383 EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
+YGR D +G G+ + E + P
Sbjct: 181 DYGR------AVDWWGLGVVMYEMMCGRLP 204
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 220 FSEKSLIGIGSFGT-VYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLK-SVRHRNLV 277
F K ++G G+ GT VY+G F D +VA+K D E ++L+ S H N++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVI 81
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ + + F+ + +E A +L++ + + + ++++ L +LH S
Sbjct: 82 RYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SL 137
Query: 338 PVVHCDIKPSNVLL-----DDDMVAHLSDFGIAKLLN-GKESMRTQTLATIEYGREGQVS 391
+VH D+KP N+L+ + A +SDFG+ K L G+ S ++ G EG ++
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP---GTEGWIA 194
Query: 392 PK 393
P+
Sbjct: 195 PE 196
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
Query: 226 IGIGSFGTVYKGRFLDGM-EVAIKVFHL-QFDGALKSFDA------------ECEVLKSV 271
+G G++G V + +G E AIKV QFD S D E +LKS+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 272 RHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
H N++K+ + + LV E+ G L + + + + D +IM + + YL
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQILSGICYL 162
Query: 332 HFGYSNPVVHCDIKPSNVLLDDD---MVAHLSDFGIAKLLNGKESMRTQTLATIEYGR-- 386
H + +VH DIKP N+LL++ + + DFG++ + +R + L T Y
Sbjct: 163 H---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR-LGTAYYIAPE 218
Query: 387 --EGQVSPKSDVYGYGITL 403
+ + + K DV+ G+ +
Sbjct: 219 VLKKKYNEKCDVWSCGVIM 237
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 232 GTVYKGRFLDGMEVAIKVFHLQFDGALKS--FDAECEVLKSVRHRNLVKIISSCSN--GN 287
G ++KGR+ G ++ +KV ++ KS F+ EC L+ H N++ ++ +C +
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 288 FEALVLEYMANGSLEKCLYS-SNGILDIFQRLSIMIDVALALEYLHFGYSNPVV--HCDI 344
L+ + GSL L+ +N ++D Q + +D A +LH P++ H +
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--TLEPLIPRHA-L 139
Query: 345 KPSNVLLDDDMVAHLS--DFGIAKLLNGKESMRTQTLA-TIEYGREGQVSPKSDVYGYGI 401
+V +D+D A +S D + G+ ++ E +D + + +
Sbjct: 140 NSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAV 199
Query: 402 TLIETFTKKKPTCEIFCEEMNLK 424
L E T++ P ++ E+ K
Sbjct: 200 LLWELVTREVPFADLSNXEIGXK 222
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 213 LLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKS----FDAECEVL 268
L + + + +IG G+FG V R +V +F+ +S F E +++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 269 KSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
+V++ + + + +V+EYM G L L S+ + + + + +V LAL
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKF-YTAEVVLAL 187
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT-LATIEY--- 384
+ +H S ++H D+KP N+LLD L+DFG ++ + T + T +Y
Sbjct: 188 DAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISP 244
Query: 385 ------GREGQVSPKSDVYGYGITLIETFTKKKP 412
G +G + D + G+ L E P
Sbjct: 245 EVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 226 IGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISS- 282
+G G +G V++G G VA+K+F + + +S+ E E+ +V RH N++ I+S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 283 --CSNGNFE-ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH---FGYS 336
N + + L+ Y +GSL L L+ L + + A L +LH FG
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 337 N--PVVHCDIKPSNVLLDDDMVAHLSDFGIA 365
+ H D K NVL+ ++ ++D G+A
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLA 160
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 217 TDHFSEKSLIGIGSFGTVY--KGRFLDGMEVAIKVF---HLQFDGALKSFDAECEVLKSV 271
+D + + ++G GSFG V K + + G E A+KV ++ +S E ++LK +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 272 RHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
H N+ K+ + + LV E G L + S ++ I+ V + Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 332 HFGYSNPVVHCDIKPSNVLLD---DDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE- 387
H N +VH D+KP N+LL+ D + DFG++ + + + E
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEV 199
Query: 388 --GQVSPKSDVYGYGITL 403
G K DV+ G+ L
Sbjct: 200 LHGTYDEKCDVWSTGVIL 217
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 23/209 (11%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDAECEVL-KSVRHR 274
TD + K IG+GS+ + E A+K+ D + + E E+L + +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKII----DKSKRDPTEEIEILLRYGQHP 76
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSL-EKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
N++ + +G + +V E G L +K L + +++ + +EYLH
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLH- 133
Query: 334 GYSNPVVHCDIKPSNVLLDDDM----VAHLSDFGIAKLLNGKESMRTQTLATIEY----- 384
+ VVH D+KPSN+L D+ + DFG AK L + + T +
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEV 191
Query: 385 -GREGQVSPKSDVYGYGITLIETFTKKKP 412
R+G D++ G+ L T P
Sbjct: 192 LERQG-YDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 40/220 (18%)
Query: 226 IGIGSFGTVYKGR--FLDGME----VAIKVFHLQFDGA-LKSFDAECEVLKSVRHRNLVK 278
+G G FG V K L G VA+K+ + L+ +E VLK V H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-----------------------LDIF 315
+ +CS L++EY GSL L S + L +
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 316 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESM- 374
+S ++ ++YL +VH D+ N+L+ + +SDFG+++ + ++S
Sbjct: 151 DLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 375 -RTQ-----TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
R+Q IE + + +SDV+ +G+ L E T
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEV 267
+ DH+ +G G F V K R G E A K + + + + E +
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD--IFQRLSIMIDVA 325
L+ +RH N++ + N L+LE ++ G L L + + Q L ++D
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD-- 119
Query: 326 LALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAH----LSDFGIA-KLLNGKE 372
+ YLH S + H D+KP N++L D V + L DFGIA K+ G E
Sbjct: 120 -GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 167
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 30/202 (14%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRH 273
TD + +G G+F V + + G E A K+ + + A + + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALAL 328
N+V++ S S F LV + + G L + YS Q++ L
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI---------L 113
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY- 384
E ++ + N +VH D+KP N+LL L+DFG+A + G + A +
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ------AWFGFA 167
Query: 385 GREGQVSP---KSDVYGYGITL 403
G G +SP + D YG + +
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDM 189
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 40/220 (18%)
Query: 226 IGIGSFGTVYKGR--FLDGME----VAIKVFHLQFDGA-LKSFDAECEVLKSVRHRNLVK 278
+G G FG V K L G VA+K+ + L+ +E VLK V H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-----------------------LDIF 315
+ +CS L++EY GSL L S + L +
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 316 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESM- 374
+S ++ ++YL +VH D+ N+L+ + +SDFG+++ + ++S
Sbjct: 151 DLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 375 -RTQ-----TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
R+Q IE + + +SDV+ +G+ L E T
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 40/220 (18%)
Query: 226 IGIGSFGTVYKGR--FLDGME----VAIKVFHLQFDGA-LKSFDAECEVLKSVRHRNLVK 278
+G G FG V K L G VA+K+ + L+ +E VLK V H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGI-----------------------LDIF 315
+ +CS L++EY GSL L S + L +
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 316 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESM- 374
+S ++ ++YL +VH D+ N+L+ + +SDFG+++ + ++S
Sbjct: 151 DLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 375 -RTQ-----TLATIEYGREGQVSPKSDVYGYGITLIETFT 408
R+Q IE + + +SDV+ +G+ L E T
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF------DGALKSFDAECEV 267
+ DH+ +G G F V K R G E A K + + + + E +
Sbjct: 23 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD--IFQRLSIMIDVA 325
L+ +RH N++ + N L+LE ++ G L L + + Q L ++D
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD-- 140
Query: 326 LALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAH----LSDFGIA-KLLNGKE 372
+ YLH S + H D+KP N++L D V + L DFGIA K+ G E
Sbjct: 141 -GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 188
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 88/210 (41%), Gaps = 18/210 (8%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAEC-----EVL 268
L D+F ++G GSFG V R + G A+KV L+ D L+ D EC +L
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRIL 77
Query: 269 KSVR-HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
R H L ++ + V+E++ G L + S + R ++ A
Sbjct: 78 SLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISA 136
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--LLNGKESMR---TQTLATI 382
L +LH +++ D+K NVLLD + L+DFG+ K + NG + T
Sbjct: 137 LMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAP 193
Query: 383 EYGREGQVSPKSDVYGYGITLIETFTKKKP 412
E +E P D + G+ L E P
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 27/179 (15%)
Query: 225 LIGIGSFGTVY--KGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISS 282
++G G+F V+ K R L G A+K S + E VLK ++H N+V +
Sbjct: 16 VLGSGAFSEVFLVKQR-LTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 283 CSNGNFEALVLEYMANGS-----LEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ LV++ ++ G LE+ +Y+ + Q+ V A++YLH N
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ------VLSAVKYLH---EN 125
Query: 338 PVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPK 393
+VH D+KP N+L +++ ++DFG++K M + + G G V+P+
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSK-------MEQNGIMSTACGTPGYVAPE 177
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 20/169 (11%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
DH+ +G G F V K R G E A K + + + + E +L+
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILD--IFQRLSIMIDVALAL 328
+RH N++ + N L+LE ++ G L L + + Q L ++D +
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GV 128
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAH----LSDFGIA-KLLNGKE 372
YLH S + H D+KP N++L D V + L DFGIA K+ G E
Sbjct: 129 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 174
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 30/202 (14%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRH 273
TD + +G G+F V + + G E A K+ + + A + + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALAL 328
N+V++ S S F LV + + G L + YS Q++ L
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI---------L 113
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY- 384
E ++ + N +VH D+KP N+LL L+DFG+A + G + A +
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ------AWFGFA 167
Query: 385 GREGQVSP---KSDVYGYGITL 403
G G +SP + D YG + +
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDM 189
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 33/188 (17%)
Query: 220 FSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQ------FDGALKSFDAECEVLKSVRH 273
F K +G G+F V L + K+F ++ G S + E VL+ ++H
Sbjct: 24 FEFKETLGTGAFSEV----VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALAL 328
N+V + + N LV++ ++ G L EK Y+ + ++ V A+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ------VLDAV 133
Query: 329 EYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYG 385
YLH +VH D+KP N+L D++ +SDFG++K+ + M T G
Sbjct: 134 YYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC------G 184
Query: 386 REGQVSPK 393
G V+P+
Sbjct: 185 TPGYVAPE 192
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEAL--VLEYMANGSLEKCLYSSNGILDIFQRLSIM 321
E ++L+ +RH+N+++++ N + + V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 322 IDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369
+ LEYLH S +VH DIKP N+LL +S G+A+ L+
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 23/216 (10%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFLDG--------MEVAIKVFHLQFDGALKSFDAECE 266
+ ++F ++G G++G V+ R + G M+V K +Q + E +
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 267 VLKSVRHRN-LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DV 324
VL+ +R LV + + L+L+Y+ G L L + + I + ++
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE--HEVQIYVGEI 168
Query: 325 ALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTL-ATIE 383
LALE+LH +++ DIK N+LLD + L+DFG++K E+ R TIE
Sbjct: 169 VLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIE 225
Query: 384 Y-------GREGQVSPKSDVYGYGITLIETFTKKKP 412
Y G + D + G+ + E T P
Sbjct: 226 YMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 27/258 (10%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEV-AIKV---FHLQFDGALKSFDAECE 266
+++ L + F +IG G+FG V + + +V A+K+ + + F E +
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 267 VLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
VL + + + + + + N LV++Y G L L L + ++ +
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA-KLLNGKESMRTQTLATIEY- 384
A++ +H + VH DIKP N+L+D + L+DFG KL+ + + T +Y
Sbjct: 187 AIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYI 243
Query: 385 ---------GREGQVSPKSDVYGYGITLIETFTKKKP-----TCEIFCEEMNLKNWVNDF 430
G +G+ P+ D + G+ + E + P E + + MN K
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ-- 301
Query: 431 LPISVMNVVDTS--LLRR 446
P V +V + + L+RR
Sbjct: 302 FPTQVTDVSENAKDLIRR 319
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 226 IGIGSFGTVYKG--------RFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+F ++KG L EV +KV +SF ++ + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
C G+ LV E++ GSL+ L + ++I +L + +A A +HF N
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA---MHFLEEN 132
Query: 338 PVVHCDIKPSNVLL 351
++H ++ N+LL
Sbjct: 133 TLIHGNVCAKNILL 146
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 28 FSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPE 87
SS+ L G LP +V++ L RN LTG P G +++Q L L N+++ +
Sbjct: 44 ISSDGLFGRLP-------HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNK 96
Query: 88 SFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFN 127
F L L++L+L N +S V+P S E L L LNL+ N
Sbjct: 97 MFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 89 FGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLK 130
FG L L L+L N L+G+ P + E ++++L L N++K
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK 91
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLN 34
L+L N++S V+P +F +LNS+ S + +SN N
Sbjct: 107 LNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%)
Query: 65 IGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNL 124
G L +L L L+ N+L G P +F + ++ L L N + + L LK LNL
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 125 SFNRLKGDIPTRSPHL 140
N++ +P HL
Sbjct: 110 YDNQISCVMPGSFEHL 125
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 226 IGIGSFGTVYKGRF--------LDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLV 277
+G G+F ++KG L EV +KV +SF ++ + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
C G+ LV E++ GSL+ L + ++I +L + +A A +HF N
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFLEEN 132
Query: 338 PVVHCDIKPSNVLL 351
++H ++ N+LL
Sbjct: 133 TLIHGNVCAKNILL 146
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 13/166 (7%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
D++ K LIG GS+G VY + + VAIK + F+ + K E +L ++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 275 NLVKI---ISSCSNGNFEAL--VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
++++ I F+ L VLE +A+ L+K L+ + L +I+ ++ L +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKK-LFKTPIFLTEQHVKTILYNLLLGEK 145
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR 375
++H + ++H D+KP+N LL+ D + DFG+A+ +N + +
Sbjct: 146 FIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIH 188
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGA-----LKSFDAECEVLKSVRHRNLVKI 279
+G G+ G V+K RF G +A+K + L D VLKS +V+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV---VLKSHDCPYIVQC 89
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPV 339
+ + +E M + EK G I +R+ + VA+ + + V
Sbjct: 90 FGTFITNTDVFIAMELMGTCA-EKLKKRMQG--PIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIA-KLLNGKESMRTQTLATIEYGREGQVSP------ 392
+H D+KPSN+LLD+ L DFGI+ +L++ K R+ A Y ++ P
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA--YMAPERIDPPDPTKP 204
Query: 393 ----KSDVYGYGITLIETFTKKKP 412
++DV+ GI+L+E T + P
Sbjct: 205 DYDIRADVWSLGISLVELATGQFP 228
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 48/224 (21%)
Query: 226 IGIGSFGTVYK------GRFLDGMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + G+ ++VA+K+ H AL S E +++ + +H
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS---ELKIMSHLGQHE 95
Query: 275 NLVKIISSCSNG----------------NF-----EALVLEYMANGSLEKCLYSSNG-IL 312
N+V ++ +C++G NF EA++ +A G + L +G L
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 313 DIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK------ 366
++ L VA + +L S +H D+ NVLL + VA + DFG+A+
Sbjct: 156 ELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 367 --LLNGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
++ G + + +A E + + +SDV+ YGI L E F+
Sbjct: 213 NYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLD---GMEVAIKVFHLQFDGALKSFDAE 264
+ Y+E + H + +G GSFG V+ R D G + A+K L+ F E
Sbjct: 51 YEYREEVHWMTH---QPRVGRGSFGEVH--RMKDKQTGFQCAVKKVRLEV------FRVE 99
Query: 265 ----CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI 320
C L S R +V + + G + + +E + GSL + L G L + L
Sbjct: 100 ELVACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYY 155
Query: 321 MIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLLN 369
+ LEYLH + ++H D+K NVLL D A L DFG A L
Sbjct: 156 LGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 318 LSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ 377
L I I +A A+E+LH S ++H D+KPSN+ D V + DFG+ ++ E +T
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 378 TLATIEYG-REGQV----------------SPKSDVYGYGITLIE---TFTKKKPTCEIF 417
Y GQV S K D++ G+ L E +F+ + I
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 418 CEEMNLK 424
+ NLK
Sbjct: 284 TDVRNLK 290
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDI-ENMKVVVEINLSRNYLTGD 60
L+LG N+L + S L ++ + N L SLP + + + + E+ L N L
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSL 124
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLK 120
LTNL L+L +N+LQ F +LT+L LDLS N L + +KL LK
Sbjct: 125 PDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLK 184
Query: 121 DLNLSFNRLK 130
DL L N+LK
Sbjct: 185 DLRLYQNQLK 194
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDI-ENMKVVVEINLSRNYLTGD 60
L L N+L S+ F L ++ N L SLP + + + + +NL+ N L
Sbjct: 90 LILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSL 148
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPES-FGELTSLESLDLSVNNLSGVIPISLEKLVYL 119
LTNL L L N+LQ +PE F +LT L+ L L N L V ++L L
Sbjct: 149 PKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 207
Query: 120 K 120
+
Sbjct: 208 Q 208
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRH 273
TD + IG G+F V + + G E A K+ + + A + + E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALAL 328
N+V++ S S F LV + + G L + YS Q++ L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI---------L 113
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDD---MVAHLSDFGIAKLLNGKES 373
E + + VVH D+KP N+LL L+DFG+A + G +
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ 161
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLD---GMEVAIKVFHLQFDGALKSFDAE 264
+ Y+E + H + +G GSFG V+ R D G + A+K L+ F E
Sbjct: 67 YEYREEVHWMTH---QPRVGRGSFGEVH--RMKDKQTGFQCAVKKVRLEV------FRVE 115
Query: 265 ----CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI 320
C L S R +V + + G + + +E + GSL + L G L + L
Sbjct: 116 ELVACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYY 171
Query: 321 MIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLLN 369
+ LEYLH + ++H D+K NVLL D A L DFG A L
Sbjct: 172 LGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 218
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 74/170 (43%), Gaps = 26/170 (15%)
Query: 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLD---GMEVAIKVFHLQFDGALKSFDAE 264
+ Y+E + H + +G GSFG V+ R D G + A+K L+ F E
Sbjct: 65 YEYREEVHWMTH---QPRLGRGSFGEVH--RMKDKQTGFQCAVKKVRLEV------FRVE 113
Query: 265 ----CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI 320
C L S R +V + + G + + +E + GSL + L G L + L
Sbjct: 114 ELVACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLPEDRALYY 169
Query: 321 MIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLLN 369
+ LEYLH + ++H D+K NVLL D A L DFG A L
Sbjct: 170 LGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 216
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 31/168 (18%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLK----- 269
L + FS +IG G FG VY R D ++ A+K D + +K
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMY----------AMKCLDKKRIKMKQGETL 235
Query: 270 SVRHRNLVKIISS-------CSNGNFE-----ALVLEYMANGSLEKCLYSSNGILDIFQR 317
++ R ++ ++S+ C + F + +L+ M G L L S +G+
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADM 294
Query: 318 LSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365
++ L LE++H + VV+ D+KP+N+LLD+ +SD G+A
Sbjct: 295 RFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 31/168 (18%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLK----- 269
L + FS +IG G FG VY R D ++ A+K D + +K
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMY----------AMKCLDKKRIKMKQGETL 235
Query: 270 SVRHRNLVKIISS-------CSNGNFE-----ALVLEYMANGSLEKCLYSSNGILDIFQR 317
++ R ++ ++S+ C + F + +L+ M G L L S +G+
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADM 294
Query: 318 LSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365
++ L LE++H + VV+ D+KP+N+LLD+ +SD G+A
Sbjct: 295 RFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 31/168 (18%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLK----- 269
L + FS +IG G FG VY R D ++ A+K D + +K
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMY----------AMKCLDKKRIKMKQGETL 235
Query: 270 SVRHRNLVKIISS-------CSNGNFE-----ALVLEYMANGSLEKCLYSSNGILDIFQR 317
++ R ++ ++S+ C + F + +L+ M G L L S +G+
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADM 294
Query: 318 LSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365
++ L LE++H + VV+ D+KP+N+LLD+ +SD G+A
Sbjct: 295 RFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 29/196 (14%)
Query: 225 LIGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDA-----ECEVLKSVRHRNLVK 278
++G GSFG V K + + E A+KV + + K+ D E E+LK + H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 279 IISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
+ + + +V E G L ++ +S + I ++ V + Y+H
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ------VFSGITYMH- 138
Query: 334 GYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE--- 387
+ +VH D+KP N+LL + D + DFG++ M+ + E
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 388 GQVSPKSDVYGYGITL 403
G K DV+ G+ L
Sbjct: 197 GTYDEKCDVWSAGVIL 212
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 31/168 (18%)
Query: 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLK----- 269
L + FS +IG G FG VY R D ++ A+K D + +K
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMY----------AMKCLDKKRIKMKQGETL 234
Query: 270 SVRHRNLVKIISS-------CSNGNFE-----ALVLEYMANGSLEKCLYSSNGILDIFQR 317
++ R ++ ++S+ C + F + +L+ M G L L S +G+
Sbjct: 235 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADM 293
Query: 318 LSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365
++ L LE++H + VV+ D+KP+N+LLD+ +SD G+A
Sbjct: 294 RFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 17/233 (7%)
Query: 225 LIGIGSFGTVYKGRFLDGMEV-AIKVFH---LQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G F Y+ +D EV A KV L + E + KS+ + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ +F +VLE SL + + + R M ++YLH +N V+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVI 164
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY------GREGQVSPKS 394
H D+K N+ L+DDM + DFG+A + + T Y ++G S +
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH-SFEV 223
Query: 395 DVYGYGITLIETFTKKKPTCEIFC-EEMNLKNWVNDFLPISVMNVVDTSLLRR 446
D++ G L T KP E C +E ++ N++ +N V ++L+RR
Sbjct: 224 DIWSLGCILY-TLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L+L NE++ + + FW L +L + S N L EN+ + ++LS N++
Sbjct: 304 LTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALG 363
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVN 103
+ GL NL+ L+L+ N+L+ F LTSL+ + L N
Sbjct: 364 DQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 405
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 67 GLTNLQLLSLENNRLQGPIPES--FGELTSLESLDLSVNNLSGVIPISLE-KLVYLKDLN 123
GL NL++L+L L G + F LTSLE L L NN+ + P S + L+
Sbjct: 101 GLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLD 160
Query: 124 LSFNRLK 130
L+FN++K
Sbjct: 161 LTFNKVK 167
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 49 EINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGV 108
++ L++N + GLT+L L+L N L F L LE LDLS N++ +
Sbjct: 303 QLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRAL 362
Query: 109 IPISLEKLVYLKDLNLSFNRLK 130
S L LK+L L N+LK
Sbjct: 363 GDQSFLGLPNLKELALDTNQLK 384
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 17/233 (7%)
Query: 225 LIGIGSFGTVYKGRFLDGMEV-AIKVFH---LQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G F Y+ +D EV A KV L + E + KS+ + ++V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ +F +VLE SL + + + R M ++YLH +N V+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVI 148
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY------GREGQVSPKS 394
H D+K N+ L+DDM + DFG+A + + T Y ++G S +
Sbjct: 149 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH-SFEV 207
Query: 395 DVYGYGITLIETFTKKKPTCEIFC-EEMNLKNWVNDFLPISVMNVVDTSLLRR 446
D++ G L T KP E C +E ++ N++ +N V ++L+RR
Sbjct: 208 DIWSLGCILY-TLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 259
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 33/179 (18%)
Query: 221 SEKSLIGIGSFGTV-YKGRFLDGMEVAIKVFHLQF-DGALKSFDAECEVL-KSVRHRNLV 277
SEK ++G GS GTV ++G F G VA+K + F D AL E ++L +S H N++
Sbjct: 19 SEK-ILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL----MEIKLLTESDDHPNVI 72
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSN------GILDIFQRLSIMIDVALALEYL 331
+ S + F + LE + N +L+ + S N + + +S++ +A + +L
Sbjct: 73 RYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 332 HFGYSNPVVHCDIKPSNVLLD-------------DDMVAHLSDFGIAKLLN-GKESMRT 376
H S ++H D+KP N+L+ +++ +SDFG+ K L+ G+ S RT
Sbjct: 132 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 17/233 (7%)
Query: 225 LIGIGSFGTVYKGRFLDGMEV-AIKVFH---LQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G F Y+ +D EV A KV L + E + KS+ + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ +F +VLE SL + + + R M ++YLH +N V+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVI 164
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY------GREGQVSPKS 394
H D+K N+ L+DDM + DFG+A + + T Y ++G S +
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH-SFEV 223
Query: 395 DVYGYGITLIETFTKKKPTCEIFC-EEMNLKNWVNDFLPISVMNVVDTSLLRR 446
D++ G L T KP E C +E ++ N++ +N V ++L+RR
Sbjct: 224 DIWSLGCILY-TLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 13/164 (7%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
D++ K LIG GS+G VY + + VAIK + F+ + K E +L ++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 275 NLVKIISSCSNGN---FEAL--VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
++++ + F+ L VLE +A+ L+K L+ + L +I+ ++ L
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKK-LFKTPIFLTEEHIKTILYNLLLGEN 143
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES 373
++H + ++H D+KP+N LL+ D + DFG+A+ +N ++
Sbjct: 144 FIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 28/210 (13%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 278 KIISSCSNGNFEALVLEYMANGSLE-------KCLYSSNGILDIFQRLSIMIDVALALEY 330
I E + Y+ +E KC + SN + F + + L+Y
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYF-----LYQILRGLKY 143
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGRE 387
+H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 144 IH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RA 199
Query: 388 GQVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 17/233 (7%)
Query: 225 LIGIGSFGTVYKGRFLDGMEV-AIKVFH---LQFDGALKSFDAECEVLKSVRHRNLVKII 280
+G G F Y+ +D EV A KV L + E + KS+ + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVV 340
+ +F +VLE SL + + + R M ++YLH +N V+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNRVI 164
Query: 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY------GREGQVSPKS 394
H D+K N+ L+DDM + DFG+A + + T Y ++G S +
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH-SFEV 223
Query: 395 DVYGYGITLIETFTKKKPTCEIFC-EEMNLKNWVNDFLPISVMNVVDTSLLRR 446
D++ G L T KP E C +E ++ N++ +N V ++L+RR
Sbjct: 224 DIWSLGCILY-TLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
E + +S+ H+++V + +F +VLE SL + L+ L + +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 125
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
+ L +YLH N V+H D+K N+ L++D+ + DFG+A + + T
Sbjct: 126 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 182
Query: 384 YGREGQVSPKS-----DVYGYGITLIETFTKKKPTCEIFC-EEMNLKNWVNDFLPISVMN 437
Y +S K DV+ G ++ T KP E C +E L+ N++ +N
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 241
Query: 438 VVDTSLLRR 446
V SL+++
Sbjct: 242 PVAASLIQK 250
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
E + +S+ H+++V + +F +VLE SL + L+ L + +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 129
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
+ L +YLH N V+H D+K N+ L++D+ + DFG+A + + T
Sbjct: 130 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 186
Query: 384 YGREGQVSPKS-----DVYGYGITLIETFTKKKPTCEIFC-EEMNLKNWVNDFLPISVMN 437
Y +S K DV+ G ++ T KP E C +E L+ N++ +N
Sbjct: 187 YIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 245
Query: 438 VVDTSLLRR 446
V SL+++
Sbjct: 246 PVAASLIQK 254
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
E + +S+ H+++V + +F +VLE SL + L+ L + +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 125
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
+ L +YLH N V+H D+K N+ L++D+ + DFG+A + + T
Sbjct: 126 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 182
Query: 384 YGREGQVSPKS-----DVYGYGITLIETFTKKKPTCEIFC-EEMNLKNWVNDFLPISVMN 437
Y +S K DV+ G ++ T KP E C +E L+ N++ +N
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 241
Query: 438 VVDTSLLRR 446
V SL+++
Sbjct: 242 PVAASLIQK 250
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 22/100 (22%)
Query: 320 IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTL 379
I + + ALE+LH S V+H D+KPSNVL++ + DFGI+ L
Sbjct: 158 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL------VDSVA 209
Query: 380 ATIEYGREGQVSP--------------KSDVYGYGITLIE 405
TI+ G + ++P KSD++ GIT+IE
Sbjct: 210 KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 249
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 29/196 (14%)
Query: 225 LIGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDA-----ECEVLKSVRHRNLVK 278
++G GSFG V K + + E A+KV + + K+ D E E+LK + H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 279 IISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
+ + + +V E G L ++ +S + I ++ V + Y+H
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ------VFSGITYMH- 138
Query: 334 GYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE--- 387
+ +VH D+KP N+LL + D + DFG++ M+ + E
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 388 GQVSPKSDVYGYGITL 403
G K DV+ G+ L
Sbjct: 197 GTYDEKCDVWSAGVIL 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 29/196 (14%)
Query: 225 LIGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDA-----ECEVLKSVRHRNLVK 278
++G GSFG V K + + E A+KV + + K+ D E E+LK + H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 279 IISSCSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
+ + + +V E G L ++ +S + I ++ V + Y+H
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ------VFSGITYMH- 138
Query: 334 GYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE--- 387
+ +VH D+KP N+LL + D + DFG++ M+ + E
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 388 GQVSPKSDVYGYGITL 403
G K DV+ G+ L
Sbjct: 197 GTYDEKCDVWSAGVIL 212
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 220 FSEKSLIGIGSFGTVYKGR-FLDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
+++ IG G++G V + VAIK + + + E ++L RH N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I EA+ Y+ +E LY L Q+LS + + L+Y+
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYK----LLKSQQLSNDHICYFLYQILRGLKYI 160
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEY 384
H S V+H D+KPSN+L++ + DFG+A++ + + T+ +AT Y
Sbjct: 161 H---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWY 213
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 22/152 (14%)
Query: 226 IGIGSFGTVYKGRFLD---GMEVAIKVFHLQFDGALKSFDA-----ECEVLKSVR-HRNL 276
+G G++G V+K +D G VA+K FD S DA E +L + H N+
Sbjct: 17 LGKGAYGIVWKS--IDRRTGEVVAVKKI---FDAFQNSTDAQRTFREIMILTELSGHENI 71
Query: 277 VKIIS--SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG 334
V +++ N LV +YM L + ++ IL+ + ++ + ++YLH G
Sbjct: 72 VNLLNVLRADNDRDVYLVFDYMET-DLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
++H D+KPSN+LL+ + ++DFG+++
Sbjct: 129 ---GLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 225 LIGIGSFGTVYKGRFLD--GMEVAIKVFHLQFDGAL---KSFDAECEVLKSVRHRNLVKI 279
++G G FG VY+G + + G ++ + V + D L + F +E ++K++ H ++VK+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPV 339
I +++E G L L + L + + + + A+ YL S
Sbjct: 91 IGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINC 146
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ-TLATIEYGREGQV-----SPK 393
VH DI N+L+ L DFG+++ + ++ + T I++ + +
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 394 SDVYGYGITLIETFT-KKKP 412
SDV+ + + + E + K+P
Sbjct: 207 SDVWMFAVCMWEILSFGKQP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 225 LIGIGSFGTVYKGRFLD--GMEVAIKVFHLQFDGAL---KSFDAECEVLKSVRHRNLVKI 279
++G G FG VY+G + + G ++ + V + D L + F +E ++K++ H ++VK+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPV 339
I +++E G L L + L + + + + A+ YL S
Sbjct: 75 IGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINC 130
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ-TLATIEYGREGQV-----SPK 393
VH DI N+L+ L DFG+++ + ++ + T I++ + +
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 394 SDVYGYGITLIETFT-KKKP 412
SDV+ + + + E + K+P
Sbjct: 191 SDVWMFAVCMWEILSFGKQP 210
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
E + +S+ H+++V + +F +VLE SL + L+ L + +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 123
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
+ L +YLH N V+H D+K N+ L++D+ + DFG+A + + T
Sbjct: 124 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 180
Query: 384 YGREGQVSPKS-----DVYGYGITLIETFTKKKPTCEIFC-EEMNLKNWVNDFLPISVMN 437
Y +S K DV+ G ++ T KP E C +E L+ N++ +N
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 239
Query: 438 VVDTSLLRR 446
V SL+++
Sbjct: 240 PVAASLIQK 248
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 225 LIGIGSFGTVYKGRFLD--GMEVAIKVFHLQFDGAL---KSFDAECEVLKSVRHRNLVKI 279
++G G FG VY+G + + G ++ + V + D L + F +E ++K++ H ++VK+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 280 ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPV 339
I +++E G L L + L + + + + A+ YL S
Sbjct: 79 IGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINC 134
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQ-TLATIEYGREGQV-----SPK 393
VH DI N+L+ L DFG+++ + ++ + T I++ + +
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 394 SDVYGYGITLIETFT-KKKP 412
SDV+ + + + E + K+P
Sbjct: 195 SDVWMFAVCMWEILSFGKQP 214
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKI----- 279
+G G G V+ D VAIK L ++K E ++++ + H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 280 ---------ISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
+ S + N +V EYM L L +L+ RL M + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL-EQGPLLEEHARL-FMYQLLRGLKY 135
Query: 331 LHFGYSNPVVHCDIKPSNVLLD-DDMVAHLSDFGIAKLLNGKESMR 375
+H S V+H D+KP+N+ ++ +D+V + DFG+A++++ S +
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHK 178
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
E + +S+ H+++V + +F +VLE SL + L+ L + +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 147
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
+ L +YLH N V+H D+K N+ L++D+ + DFG+A + + T
Sbjct: 148 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 204
Query: 384 YGREGQVSPKS-----DVYGYGITLIETFTKKKPTCEIFC-EEMNLKNWVNDFLPISVMN 437
Y +S K DV+ G ++ T KP E C +E L+ N++ +N
Sbjct: 205 YIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 263
Query: 438 VVDTSLLRR 446
V SL+++
Sbjct: 264 PVAASLIQK 272
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMID 323
E + +S+ H+++V + +F +VLE SL + L+ L + +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ 149
Query: 324 VALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIE 383
+ L +YLH N V+H D+K N+ L++D+ + DFG+A + + T
Sbjct: 150 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 206
Query: 384 YGREGQVSPKS-----DVYGYGITLIETFTKKKPTCEIFC-EEMNLKNWVNDFLPISVMN 437
Y +S K DV+ G ++ T KP E C +E L+ N++ +N
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHIN 265
Query: 438 VVDTSLLRR 446
V SL+++
Sbjct: 266 PVAASLIQK 274
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEV-AIKV---FHLQFDGALKSFDAECE 266
+E+ L + F +IG G+FG V + + + A+K+ + + F E +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 267 VLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
VL + + + + + + N LV++Y G L L L + ++ L
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 186
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT---------- 376
A++ +H VH DIKP NVLLD + L+DFG +N ++++
Sbjct: 187 AIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 243
Query: 377 --QTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ L +E G G+ P+ D + G+ + E + P
Sbjct: 244 SPEILQAMEDGM-GKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEV-AIKV---FHLQFDGALKSFDAECE 266
+E+ L + F +IG G+FG V + + + A+K+ + + F E +
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 267 VLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL 326
VL + + + + + + N LV++Y G L L L + ++ L
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT---------- 376
A++ +H VH DIKP NVLLD + L+DFG +N ++++
Sbjct: 203 AIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 259
Query: 377 --QTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKP 412
+ L +E G G+ P+ D + G+ + E + P
Sbjct: 260 SPEILQAMEDGM-GKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 320 IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NG 370
I + + ALE+LH S V+H D+KPSNVL++ + DFGI+ L G
Sbjct: 114 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAG 171
Query: 371 KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIE 405
+ E ++G S KSD++ GIT+IE
Sbjct: 172 CKPYMAPERINPELNQKG-YSVKSDIWSLGITMIE 205
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 226 IGIGSFGTV---YKGRFLDGMEVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKII 280
+G G++G+V Y R +VA+K F + + E +LK ++H N++ ++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 281 S----SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS 336
+ S +F + L G+ + S + D + ++ + L+Y+H S
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH---S 149
Query: 337 NPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
++H D+KPSNV +++D + DFG+A+
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367
H S V+H D+KPSN+LL+ + DFG+A++
Sbjct: 145 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369
H S V+H D+KPSN+LL+ + DFG+A++ +
Sbjct: 145 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISS 282
+G G+F V + + L G E A K+ + + A + + E + + ++H N+V++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 283 CSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
S L+ + + G L + YS Q++ LE + +
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI---------LEAVLHCHQM 140
Query: 338 PVVHCDIKPSNVLLDDDM---VAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSP-- 392
VVH D+KP N+LL + L+DFG+A + G++ T G +SP
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGT-----PGYLSPEV 195
Query: 393 -KSDVYGYGITL 403
+ D YG + L
Sbjct: 196 LRKDPYGKPVDL 207
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 43/219 (19%)
Query: 226 IGIGSFGTVYKGRFLD------GMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + M VA+K+ HL AL S E +VL + H
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHM 103
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEK----------CLYSSNGILDIFQRL------ 318
N+V ++ +C+ G ++ EY G L C +S I++ +
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 319 -SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLN 369
S VA + +L S +H D+ N+LL + + DFG+A+ ++
Sbjct: 164 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 370 GKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + +A E + +SDV+ YGI L E F+
Sbjct: 221 GNARLPVKWMAP-ESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAI-KVFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAI K+ + + E ++L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 145 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 200
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 139 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 194
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 146 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 201
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 146
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 147 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 202
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 137
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 138 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 193
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 145 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 200
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369
H S V+H D+KPSN+LL+ + DFG+A++ +
Sbjct: 145 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 139 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 194
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V L+ + VAIK + + + E ++L RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369
H S V+H D+KPSN+LL+ + DFG+A++ +
Sbjct: 146 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 28/212 (13%)
Query: 218 DHFSEKSLIGIGSFGTV------YKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV 271
+ F L+G G+FG V GR+ M++ K + D + E VL++
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYY-AMKILKKEVIVAKDEVAHTL-TENRVLQNS 205
Query: 272 RHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL 331
RH L + S + V+EY G L L S + + ++ AL+YL
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYL 264
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQTLA 380
H VV+ D+K N++LD D ++DFG+ K E + + L
Sbjct: 265 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 381 TIEYGREGQVSPKSDVYGYGITLIETFTKKKP 412
+YGR D +G G+ + E + P
Sbjct: 323 DNDYGR------AVDWWGLGVVMYEMMCGRLP 348
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 43/219 (19%)
Query: 226 IGIGSFGTVYKGRFLD------GMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + M VA+K+ HL AL S E +VL + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHM 110
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEK----------CLYSSNGILDIFQRL------ 318
N+V ++ +C+ G ++ EY G L C +S I++ +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 319 -SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLN 369
S VA + +L S +H D+ N+LL + + DFG+A+ ++
Sbjct: 171 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 370 GKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + +A E + +SDV+ YGI L E F+
Sbjct: 228 GNARLPVKWMAP-ESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 43/219 (19%)
Query: 226 IGIGSFGTVYKGRFLD------GMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + M VA+K+ HL AL S E +VL + H
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHM 105
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEK----------CLYSSNGILDIFQRL------ 318
N+V ++ +C+ G ++ EY G L C +S I++ +
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 319 -SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLN 369
S VA + +L S +H D+ N+LL + + DFG+A+ ++
Sbjct: 166 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 370 GKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + +A E + +SDV+ YGI L E F+
Sbjct: 223 GNARLPVKWMAP-ESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 28/215 (13%)
Query: 215 LATDHFSEKSLIGIGSFGTV------YKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVL 268
+ + F L+G G+FG V GR+ M++ K + D + E VL
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYY-AMKILKKEVIVAKDEVAHTL-TENRVL 205
Query: 269 KSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
++ RH L + S + V+EY G L L S + + ++ AL
Sbjct: 206 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSAL 264
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQ 377
+YLH VV+ D+K N++LD D ++DFG+ K E + +
Sbjct: 265 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 322
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFTKKKP 412
L +YGR D +G G+ + E + P
Sbjct: 323 VLEDNDYGR------AVDWWGLGVVMYEMMCGRLP 351
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 43/219 (19%)
Query: 226 IGIGSFGTVYKGRFLD------GMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + M VA+K+ HL AL S E +VL + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHM 110
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEK----------CLYSSNGILDIFQRL------ 318
N+V ++ +C+ G ++ EY G L C +S I++ +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 319 -SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLN 369
S VA + +L S +H D+ N+LL + + DFG+A+ ++
Sbjct: 171 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 370 GKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + +A E + +SDV+ YGI L E F+
Sbjct: 228 GNARLPVKWMAP-ESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 43/219 (19%)
Query: 226 IGIGSFGTVYKGRFLD------GMEVAIKVF----HLQFDGALKSFDAECEVLKSV-RHR 274
+G G+FG V + M VA+K+ HL AL S E +VL + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHM 87
Query: 275 NLVKIISSCSNGNFEALVLEYMANGSLEK----------CLYSSNGILDIFQRL------ 318
N+V ++ +C+ G ++ EY G L C +S I++ +
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 319 -SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLN 369
S VA + +L S +H D+ N+LL + + DFG+A+ ++
Sbjct: 148 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 370 GKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
G + + +A E + +SDV+ YGI L E F+
Sbjct: 205 GNARLPVKWMAP-ESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Query: 223 KSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAE-CEVLKSVRHRNLVKII 280
+ ++ G F VY+ + + G E A+K + ++ E C + K H N+V+
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 281 SSCS-------NGNFEALVLEYMANGSLEKCL--YSSNGILDIFQRLSIMIDVALALEYL 331
S+ S G E L+L + G L + L S G L L I A++++
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369
H P++H D+K N+LL + L DFG A ++
Sbjct: 153 HR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 28/215 (13%)
Query: 215 LATDHFSEKSLIGIGSFGTV------YKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVL 268
+ + F L+G G+FG V GR+ M++ K + D + E VL
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYY-AMKILKKEVIVAKDEVAHTL-TENRVL 62
Query: 269 KSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
++ RH L + S + V+EY G L L S + + ++ AL
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSAL 121
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQ 377
+YLH VV+ D+K N++LD D ++DFG+ K E + +
Sbjct: 122 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFTKKKP 412
L +YGR D +G G+ + E + P
Sbjct: 180 VLEDNDYGR------AVDWWGLGVVMYEMMCGRLP 208
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L + RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 143 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 198
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 28/215 (13%)
Query: 215 LATDHFSEKSLIGIGSFGTV------YKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVL 268
+ + F L+G G+FG V GR+ M++ K + D + E VL
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYY-AMKILKKEVIVAKDEVAHTL-TENRVL 64
Query: 269 KSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
++ RH L + S + V+EY G L L S + + ++ AL
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSAL 123
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQ 377
+YLH VV+ D+K N++LD D ++DFG+ K E + +
Sbjct: 124 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFTKKKP 412
L +YGR D +G G+ + E + P
Sbjct: 182 VLEDNDYGR------AVDWWGLGVVMYEMMCGRLP 210
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 16/206 (7%)
Query: 214 LLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHL-QFDGA----LKSFDAECEV 267
+L D + +IG G+F V + + G + A+K+ + +F + + E +
Sbjct: 20 VLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI 79
Query: 268 LKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327
++H ++V+++ + S+ +V E+M L + ++ +
Sbjct: 80 CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIA------KLLNGKESMRTQT 378
LE L + + N ++H D+KP NVLL ++ L DFG+A L+ G
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHF 199
Query: 379 LATIEYGREGQVSPKSDVYGYGITLI 404
+A RE P DV+G G+ L
Sbjct: 200 MAPEVVKREPYGKP-VDVWGCGVILF 224
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 28/215 (13%)
Query: 215 LATDHFSEKSLIGIGSFGTV------YKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVL 268
+ + F L+G G+FG V GR+ M++ K + D + E VL
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYY-AMKILKKEVIVAKDEVAHTL-TENRVL 63
Query: 269 KSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALAL 328
++ RH L + S + V+EY G L L S + + ++ AL
Sbjct: 64 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSAL 122
Query: 329 EYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK-----------LLNGKESMRTQ 377
+YLH VV+ D+K N++LD D ++DFG+ K E + +
Sbjct: 123 DYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 378 TLATIEYGREGQVSPKSDVYGYGITLIETFTKKKP 412
L +YGR D +G G+ + E + P
Sbjct: 181 VLEDNDYGR------AVDWWGLGVVMYEMMCGRLP 209
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 226 IGIGSFGTV---YKGRFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKII 280
+G G++G V GR G +VAIK + F L K E +LK +RH N++ ++
Sbjct: 33 VGSGAYGAVCSAVDGR--TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 281 ------SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG 334
+ + LV+ +M L K + D Q L V L+ L +
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFL-----VYQMLKGLRYI 144
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
++ ++H D+KP N+ +++D + DFG+A+
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367
H S V+H D+KPSN+LL+ + DFG+A++
Sbjct: 141 H---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARV 173
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L + RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369
H S V+H D+KPSN+LL+ + DFG+A++ +
Sbjct: 143 H---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVAD 177
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 26/203 (12%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFH------LQFDGALKSFDAECEVLK 269
+D + +G G++G V + L G E AIK+ GAL E VLK
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD---EVAVLK 76
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSL--EKCLYSSNGILDIFQRLSIMIDVALA 327
+ H N++K+ + LV+E G L E L +D IM V
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA---AVIMKQVLSG 133
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDD---DMVAHLSDFGIAKLL----NGKESMRTQTLA 380
YLH + +VH D+KP N+LL+ D + + DFG++ KE + T
Sbjct: 134 TTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYI 190
Query: 381 TIEYGREGQVSPKSDVYGYGITL 403
E R+ + K DV+ G+ L
Sbjct: 191 APEVLRK-KYDEKCDVWSCGVIL 212
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 15/156 (9%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367
H S V+H D+KPSN+LL+ + DFG+A++
Sbjct: 141 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 141 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 196
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 275 NLVKIISSCSN--GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++K+I + + ALV EY+ N K LY IL F M ++ AL+Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 149
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS 391
S ++H D+KP NV++D L D+G+A+ + + + + G E V
Sbjct: 150 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVD 206
Query: 392 PKS-----DVYGYGITLIETFTKKKP 412
+ D++ G L +++P
Sbjct: 207 YQMYDYSLDMWSLGCMLASMIFRREP 232
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 339 VVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSP------ 392
++H DIKPSN+LLD L DFGI+ L + +T+ Y ++ P
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA-KTRDAGCRPYMAPERIDPSASRQG 205
Query: 393 ---KSDVYGYGITLIETFTKKKP 412
+SDV+ GITL E T + P
Sbjct: 206 YDVRSDVWSLGITLYELATGRFP 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
Query: 224 SLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKII 280
S +G G++G+V + G+++A+K F + K E +LK ++H N++ ++
Sbjct: 57 SPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 281 ------SSCSNGNFEALVLEYMAN--GSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
+S N LV M ++ KC ++ + ++ + L+Y+H
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH 171
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 172 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 275 NLVKIISSCSN--GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N++K+I + + ALV EY+ N K LY IL F M ++ AL+Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 154
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVS 391
S ++H D+KP NV++D L D+G+A+ + + + + G E V
Sbjct: 155 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVD 211
Query: 392 PKS-----DVYGYGITLIETFTKKKP 412
+ D++ G L +++P
Sbjct: 212 YQMYDYSLDMWSLGCMLASMIFRREP 237
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKSVRHRNLVK 278
+G G F V K R G+E A K + A + + E +L+ V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP 338
+ N L+LE ++ G L L + + + S + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKK 135
Query: 339 VVHCDIKPSNVLLDDDMVA----HLSDFGIA 365
+ H D+KP N++L D + L DFG+A
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKSVRHRNLVK 278
+G G F V K R G+E A K + A + + E +L+ V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP 338
+ N L+LE ++ G L L + + + S + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKK 135
Query: 339 VVHCDIKPSNVLLDDDMVA----HLSDFGIA 365
+ H D+KP N++L D + L DFG+A
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 143 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 198
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S IG G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 144
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 145 YIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKSVRHRNLVK 278
+G G F V K R G+E A K + A + + E +L+ V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP 338
+ N L+LE ++ G L L + + + S + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKK 135
Query: 339 VVHCDIKPSNVLLDDDMVA----HLSDFGIA 365
+ H D+KP N++L D + L DFG+A
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 141 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 196
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKSVRHRNLVK 278
+G G F V K R G+E A K + A + + E +L+ V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP 338
+ N L+LE ++ G L L + + + S + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKK 135
Query: 339 VVHCDIKPSNVLLDDDMVA----HLSDFGIA 365
+ H D+KP N++L D + L DFG+A
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369
H S V+H D+KPSN+LL+ + DFG+A++ +
Sbjct: 161 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 195
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKSVRHRNLVK 278
+G G F V K R G+E A K + A + + E +L+ V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP 338
+ N L+LE ++ G L L + + + S + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKK 135
Query: 339 VVHCDIKPSNVLLDDDMVA----HLSDFGIA 365
+ H D+KP N++L D + L DFG+A
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L RH N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 148
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 149 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 204
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ +E LY L Q LS + + L+Y+
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYK----LLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 141 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 196
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 128
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAEC-EVLKSVRHRN 275
D F + + G G+FGTV G+ GM VAIK +Q D ++ + + + L + H N
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQ-DPRFRNRELQIMQDLAVLHHPN 80
Query: 276 LVKIIS-------SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL-- 326
+V++ S + +V+EY+ + +L +C N I+I V L
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRC--CRNYYRRQVAPPPILIKVFLFQ 137
Query: 327 ---ALEYLHFGYSNPVVHCDIKPSNVLLDD-DMVAHLSDFGIAKLLNGKE 372
++ LH N V H DIKP NVL+++ D L DFG AK L+ E
Sbjct: 138 LIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE 186
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 85/192 (44%), Gaps = 20/192 (10%)
Query: 217 TDHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRH 273
TD + +G G+F V + + E A K+ + + A + + E + + ++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 274 RNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHF 333
N+V++ S S F LV + + G L + + + + + + LE ++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----EYYSEADASHCIHQILESVNH 145
Query: 334 GYSNPVVHCDIKPSNVLLDDD---MVAHLSDFGIAKLLNGKESMRTQTLATIEY-GREGQ 389
+ + +VH D+KP N+LL L+DFG+A + G++ A + G G
Sbjct: 146 IHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ------AWFGFAGTPGY 199
Query: 390 VSP---KSDVYG 398
+SP + D YG
Sbjct: 200 LSPEVLRKDPYG 211
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 23/154 (14%)
Query: 226 IGIGSFGTV---YKGRFLDGMEVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKII 280
+G G++G+V Y R +VA+K F + + E +LK ++H N++ ++
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 281 S----SCSNGNFEALVLEYMANGS----LEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
+ S +F + L G+ + KC S+ + ++ + L+Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYIH 140
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
S ++H D+KPSNV +++D + DFG+A+
Sbjct: 141 ---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 23/154 (14%)
Query: 226 IGIGSFGTV---YKGRFLDGMEVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKII 280
+G G++G+V Y R +VA+K F + + E +LK ++H N++ ++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 281 S----SCSNGNFEALVLEYMANGS----LEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
+ S +F + L G+ + KC S+ + ++ + L+Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYIH 148
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
S ++H D+KPSNV +++D + DFG+A+
Sbjct: 149 ---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 221 SEKSLIGIGSFGTV-YKGRFLDGMEVAIKVFHLQF-DGALKSFDAECEVL-KSVRHRNLV 277
SEK ++G GS GTV ++G F G VA+K + F D AL E ++L +S H N++
Sbjct: 37 SEK-ILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL----MEIKLLTESDDHPNVI 90
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSN------GILDIFQRLSIMIDVALALEYL 331
+ S + F + LE + N +L+ + S N + + +S++ +A + +L
Sbjct: 91 RYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 332 HFGYSNPVVHCDIKPSNVLLD-------------DDMVAHLSDFGIAKLLN-GKESMRT- 376
H S ++H D+KP N+L+ +++ +SDFG+ K L+ G+ R
Sbjct: 150 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 377 ----------QTLATIEYGREGQVSPKSDVYGYGITLIETFTK-KKPTCEIFCEEMNL 423
+ +E + +++ D++ G +K K P + + E N+
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 264
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 128
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 221 SEKSLIGIGSFGTV-YKGRFLDGMEVAIKVFHLQF-DGALKSFDAECEVL-KSVRHRNLV 277
SEK ++G GS GTV ++G F G VA+K + F D AL E ++L +S H N++
Sbjct: 37 SEK-ILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL----MEIKLLTESDDHPNVI 90
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSN------GILDIFQRLSIMIDVALALEYL 331
+ S + F + LE + N +L+ + S N + + +S++ +A + +L
Sbjct: 91 RYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 332 HFGYSNPVVHCDIKPSNVLLD-------------DDMVAHLSDFGIAKLLN-GKESMRT- 376
H S ++H D+KP N+L+ +++ +SDFG+ K L+ G+ R
Sbjct: 150 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 377 ----------QTLATIEYGREGQVSPKSDVYGYGITLIETFTK-KKPTCEIFCEEMNL 423
+ +E + +++ D++ G +K K P + + E N+
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 264
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 226 IGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKSVRHRNLVK 278
+G G F V K R G+E A K + A + + E +L+ V H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP 338
+ N L+LE ++ G L L + + + S + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKK 135
Query: 339 VVHCDIKPSNVLLDDDMVA----HLSDFGIA 365
+ H D+KP N++L D + L DFG+A
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 85/188 (45%), Gaps = 40/188 (21%)
Query: 210 YQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDA-----E 264
Y++ ++A D +G G FG V++ +E + K ++ +K D E
Sbjct: 4 YEKYMIAED-------LGRGEFGIVHRC-----VETSSKKTYMAKFVKVKGTDQVLVKKE 51
Query: 265 CEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDV 324
+L RHRN++ + S + ++ E+++ + + + +S L+ + +S + V
Sbjct: 52 ISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQV 111
Query: 325 ALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
AL++LH S+ + H DI+P N++ ++ R+ T+ IE+
Sbjct: 112 CEALQFLH---SHNIGHFDIRPENIIY--------------------QTRRSSTIKIIEF 148
Query: 385 GREGQVSP 392
G+ Q+ P
Sbjct: 149 GQARQLKP 156
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 320 IMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL---------NG 370
I + + ALE+LH S V+H D+KPSNVL++ DFGI+ L G
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAG 198
Query: 371 KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIE 405
+ E ++G S KSD++ GIT IE
Sbjct: 199 CKPYXAPERINPELNQKG-YSVKSDIWSLGITXIE 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 144
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 145 YIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 20 LNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79
LN++ +FS+N L PL +N+ +V+I ++ N + DI P + LTNL L+L NN
Sbjct: 62 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQI-ADITP-LANLTNLTGLTLFNN 117
Query: 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRL 129
++ P LT+L L+LS N +S + +L L L+ LN S N++
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQV 163
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNG-SLPLDIENMKVVVEINLSRNYLTGD 60
L+ SN+++ + P NL ++ D SSN ++ S+ + N++ ++ + N D
Sbjct: 156 LNFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI----ATNNQISD 209
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPIS-LEKLVYL 119
I P +G LTNL LSL N+L+ + LT+L LDL+ N +S + P+S L KL L
Sbjct: 210 ITP-LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 266
Query: 120 K 120
K
Sbjct: 267 K 267
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
LSL N+L + T +L ++ D ++N ++ PL + + E+ L N ++ +I
Sbjct: 222 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NI 276
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPI-SLEKLVYL 119
P + GLT L L L N+L+ P L +L L L NN+S + P+ SL KL L
Sbjct: 277 SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRL 332
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 33/178 (18%)
Query: 221 SEKSLIGIGSFGTV-YKGRFLDGMEVAIKVFHLQF-DGALKSFDAECEVL-KSVRHRNLV 277
SEK ++G GS GTV ++G F G VA+K + F D AL E ++L +S H N++
Sbjct: 19 SEK-ILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIAL----MEIKLLTESDDHPNVI 72
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSN------GILDIFQRLSIMIDVALALEYL 331
+ S + F + LE + N +L+ + S N + + +S++ +A + +L
Sbjct: 73 RYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 332 HFGYSNPVVHCDIKPSNVLLD-------------DDMVAHLSDFGIAKLLN-GKESMR 375
H S ++H D+KP N+L+ +++ +SDFG+ K L+ G+ R
Sbjct: 132 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 150
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 151 YIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 217 TDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFH------LQFDGALKSFDAECEVLK 269
+D + +G G++G V + L G E AIK+ GAL E VLK
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD---EVAVLK 59
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSL--EKCLYSSNGILDIFQRLSIMIDVALA 327
+ H N++K+ + LV+E G L E L +D IM V
Sbjct: 60 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA---AVIMKQVLSG 116
Query: 328 LEYLHFGYSNPVVHCDIKPSNVLLDD---DMVAHLSDFGIAKL--LNGKESMRTQTLATI 382
YLH + +VH D+KP N+LL+ D + + DFG++ + GK R T I
Sbjct: 117 TTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYI 173
Query: 383 --EYGREGQVSPKSDVYGYGITL 403
E R+ + K DV+ G+ L
Sbjct: 174 APEVLRK-KYDEKCDVWSCGVIL 195
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 146
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 147 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 141
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 142 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 146
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 147 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 162
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 163 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 141
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 142 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 162
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 163 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 136
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 137 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 150
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 151 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 151
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 152 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 135
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 136 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 151
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 152 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + S D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+ +
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 144
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 145 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 137
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 138 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 145
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 146 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 159
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 160 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 146
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 147 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 144
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 145 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 136
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 137 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 138
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 139 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+LE +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 158
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 159 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 141
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 142 YIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 146
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 147 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 151
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 152 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 37 LPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLE 96
+P D+ + +N+S+NY++ I L+ L++L + +NR+Q F LE
Sbjct: 15 VPKDLSQKTTI--LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELE 72
Query: 97 SLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPTRSPHLQVPLCK 146
LDLS N L + IS V LK L+LSFN +P+CK
Sbjct: 73 YLDLSHNKL---VKISCHPTVNLKHLDLSFNAFDA----------LPICK 109
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 226 IGIGSFGTVYKGRFLD---GMEVAIKVFHLQFDGALKSFDAECEVL--KSVRHRNLVKII 280
+G G++G+V +D G +VAIK F + + A E+L K ++H N++ ++
Sbjct: 32 VGSGAYGSVCSA--IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 281 ------SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG 334
SS N LV+ +M L+K + G+ F I V L+ L +
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQT-DLQKIM----GLK--FSEEKIQYLVYQMLKGLKYI 142
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
+S VVH D+KP N+ +++D + DFG+A+
Sbjct: 143 HSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 141
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 142 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 275 NLVKIIS------SCSNGNFEALVLEYMAN--GSLEKCLYSSNGILDIFQRLSIMIDVAL 326
N++ ++ S N LV M ++ KC ++ + ++ +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILR 142
Query: 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
L+Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 20/152 (13%)
Query: 226 IGIGSFGTVYKGRFLD---GMEVAIKVFHLQFDGALKSFDAECEVL--KSVRHRNLVKII 280
+G G++G+V +D G +VAIK F + + A E+L K ++H N++ ++
Sbjct: 50 VGSGAYGSVCSA--IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 281 ------SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG 334
SS N LV+ +M L+K + F I V L+ L +
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGME------FSEEKIQYLVYQMLKGLKYI 160
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
+S VVH D+KP N+ +++D + DFG+A+
Sbjct: 161 HSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 38/214 (17%)
Query: 210 YQELLLATDHFSEKSLIGIGSFGTVY--KGRFLDGMEVAIKVFHLQFDGALKSFDAECEV 267
Y+ + ++ F + IG G+F +VY + G E I + HL AE +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 268 LKSVRHRNLVKIISSCSNGNFEALV-LEYMANGSLEKCLYSSNGILDIFQRLSI------ 320
L ++ V + C N ++ + Y+ + S LDI LS
Sbjct: 73 LTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESF----------LDILNSLSFQEVREY 122
Query: 321 MIDVALALEYLH-FGYSNPVVHCDIKPSNVLLDDDMVAH-LSDFGIAK--------LLN- 369
M+++ AL+ +H FG +VH D+KPSN L + + + L DFG+A+ LL
Sbjct: 123 MLNLFKALKRIHQFG----IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKF 178
Query: 370 ----GKESMRTQTLATIEYGREGQVSPKSDVYGY 399
++ +Q +I R QV+P++ G+
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGF 212
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNG-SLPLDIENMKVVVEINLSRNYLTGD 60
LS SN+++ + P NL ++ D SSN ++ S+ + N++ ++ + N D
Sbjct: 156 LSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI----ATNNQISD 209
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPIS-LEKLVYL 119
I P +G LTNL LSL N+L+ + LT+L LDL+ N +S + P+S L KL L
Sbjct: 210 ITP-LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 266
Query: 120 K 120
K
Sbjct: 267 K 267
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 20 LNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79
LN++ +FS+N L PL +N+ +V+I ++ N + DI P + LTNL L+L NN
Sbjct: 62 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQI-ADITP-LANLTNLTGLTLFNN 117
Query: 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRL 129
++ P LT+L L+LS N +S + +L L L+ L+ S N++
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQV 163
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
LSL N+L + T +L ++ D ++N ++ PL + + E+ L N ++ +I
Sbjct: 222 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NI 276
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPI-SLEKLVYL 119
P + GLT L L L N+L+ P L +L L L NN+S + P+ SL KL L
Sbjct: 277 SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRL 332
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNG-SLPLDIENMKVVVEINLSRNYLTGD 60
LS SN+++ + P NL ++ D SSN ++ S+ + N++ ++ + N D
Sbjct: 156 LSFSSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI----ATNNQISD 209
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPIS-LEKLVYL 119
I P +G LTNL LSL N+L+ + LT+L LDL+ N +S + P+S L KL L
Sbjct: 210 ITP-LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 266
Query: 120 K 120
K
Sbjct: 267 K 267
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 20 LNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79
LN++ +FS+N L PL +N+ +V+I ++ N + DI P + LTNL L+L NN
Sbjct: 62 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQI-ADITP-LANLTNLTGLTLFNN 117
Query: 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRL 129
++ P LT+L L+LS N +S + +L L L+ L+ S N++
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQV 163
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
LSL N+L + T +L ++ D ++N ++ PL + + E+ L N ++ +I
Sbjct: 222 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NI 276
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPI-SLEKLVYL 119
P + GLT L L L N+L+ P L +L L L NN+S + P+ SL KL L
Sbjct: 277 SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRL 332
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 224 SLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKII 280
S +G G++G+V G+ VA+K F + K E +LK ++H N++ ++
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 281 S------SCSNGNFEALVLEYMAN--GSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
S N LV M ++ KC ++ + ++ + L+Y+H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH 148
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 149 ---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 291 LVLEYMANGSL-EKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
+++E M G L + + + IM D+ A+++LH S+ + H D+KP N+
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENL 159
Query: 350 LL---DDDMVAHLSDFGIAK 366
L + D V L+DFG AK
Sbjct: 160 LYTSKEKDAVLKLTDFGFAK 179
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 291 LVLEYMANGSL-EKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
+++E M G L + + + IM D+ A+++LH S+ + H D+KP N+
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENL 140
Query: 350 LL---DDDMVAHLSDFGIAK 366
L + D V L+DFG AK
Sbjct: 141 LYTSKEKDAVLKLTDFGFAK 160
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDI-ENMKVVVEINLSRNYLTGD 60
L+LG N+L + S L ++ + N L SLP + + + + E+ L N L
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSL 124
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLK 120
LTNL L L +N+LQ F +LT+L LDL N L + +KL LK
Sbjct: 125 PDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLK 184
Query: 121 DLNLSFNRLK 130
L+L+ N+LK
Sbjct: 185 QLSLNDNQLK 194
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 68 LTNLQLLSLENNRLQGPIPES-FGELTSLESLDLSVNNLSGVIPISLEKLVYL 119
LTNL L L+NN+LQ +PE F +LT L+ L L+ N L V ++L L
Sbjct: 156 LTNLTRLDLDNNQLQS-LPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSL 207
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G VA+K F + K E +LK ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + + D Q L + + L+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQILRGLK 135
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 136 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 28/155 (18%)
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI-MI 322
E VLK + H N++K+ + LV+E G L +I R+ +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL---------FDEIIHRMKFNEV 136
Query: 323 DVALALE-------YLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKE 372
D A+ ++ YLH + +VH D+KP N+LL + D + + DFG++ + ++
Sbjct: 137 DAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193
Query: 373 SMRTQTLATIEYGR----EGQVSPKSDVYGYGITL 403
M+ + L T Y + K DV+ G+ L
Sbjct: 194 KMK-ERLGTAYYIAPEVLRKKYDEKCDVWSIGVIL 227
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 37/211 (17%)
Query: 213 LLLATDHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVL--K 269
++ +D + IG G+FG R E VA+K G + + E++ +
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIER---GEKIDENVKREIINHR 70
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----YSSNGILDIFQRLSIMIDV 324
S+RH N+V+ A+V+EY + G L + + +S + FQ+L +
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 325 ALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHL--SDFGIAK--LLNGKESMRTQTLA 380
A A++ V H D+K N LLD L +DFG +K +L+ + T A
Sbjct: 131 AHAMQ---------VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPA 181
Query: 381 TI--------EYGREGQVSPKSDVYGYGITL 403
I EY +G+V +DV+ G+TL
Sbjct: 182 YIAPEVLLKKEY--DGKV---ADVWSCGVTL 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + D+G+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Query: 219 HFSEKSLIGIGSFGTVYKG--RFLDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRN 275
+ K I G G +Y R ++G V +K + H A AE + L V H +
Sbjct: 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPS 140
Query: 276 LVKIISSCSNGNFEA-----LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
+V+I + + + +V+EY+ SL++ S L + + ++ ++++ AL Y
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR---SKGQKLPVAEAIAYLLEILPALSY 197
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV 390
LH S +V+ D+KP N++L ++ + L D G +N + YG G
Sbjct: 198 LH---SIGLVYNDLKPENIMLTEEQL-KLIDLGAVSRINSFGYL---------YGTPGFQ 244
Query: 391 SPK---------SDVYGYGITL 403
+P+ +D+Y G TL
Sbjct: 245 APEIVRTGPTVATDIYTVGRTL 266
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G VA+K F + K E +LK ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 135
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 136 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G VA+K F + K E +LK ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 159
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 160 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G VA+K F + K E +LK ++H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 159
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 160 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G VA+K F + K E +LK ++H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 135
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 136 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G VA+K F + K E +LK ++H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 158
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 159 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 30/193 (15%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISS 282
+G G+F V + + L G E A + + + A + + E + + ++H N+V++ S
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 283 CSNGNFEALVLEYMANGSL-----EKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
S L+ + + G L + YS Q++ LE + +
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI---------LEAVLHCHQM 129
Query: 338 PVVHCDIKPSNVLLDDDM---VAHLSDFGIAKLLNGKESMRTQTLATIEY-GREGQVSP- 392
VVH ++KP N+LL + L+DFG+A + G++ A + G G +SP
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ------AWFGFAGTPGYLSPE 183
Query: 393 --KSDVYGYGITL 403
+ D YG + L
Sbjct: 184 VLRKDPYGKPVDL 196
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSC- 283
IG GSFG +Y G G EVAIK+ ++ E ++ K ++ + I C
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQGGVGIPTIRWCG 72
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ G++ +V+E + SLE + + L + + +EY+H S +H D
Sbjct: 73 AEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRD 128
Query: 344 IKPSNVLL---DDDMVAHLSDFGIAK 366
+KP N L+ + ++ DFG+AK
Sbjct: 129 VKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 226 IGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSC- 283
IG GSFG +Y G G EVAIK+ ++ E ++ K ++ + I C
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQGGVGIPTIRWCG 74
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ G++ +V+E + SLE + + L + + +EY+H S +H D
Sbjct: 75 AEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRD 130
Query: 344 IKPSNVLL---DDDMVAHLSDFGIAK 366
+KP N L+ + ++ DFG+AK
Sbjct: 131 VKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 26/209 (12%)
Query: 220 FSEKSLIGIGSFGTVYKGRF-LDGMEVAIK-VFHLQFDGALKSFDAECEVLKSVRHRNLV 277
++ S IG G++G V ++ + VAIK + + + E ++L RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 278 KIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLS------IMIDVALALEYL 331
I E + Y+ + LY L Q LS + + L+Y+
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYK----LLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 332 HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMR---TQTLATIEYGREG 388
H S V+H D+KPSN+LL+ + DFG+A++ + T+ +AT Y R
Sbjct: 161 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY-RAP 216
Query: 389 QVSPKS-------DVYGYGITLIETFTKK 410
++ S D++ G L E + +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 318 LSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL--NGKESMR 375
+S VA +E+L S +H D+ N+LL ++ V + DFG+A+ + N +
Sbjct: 202 ISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 376 TQTLATIEYGREGQV-----SPKSDVYGYGITLIETFT 408
T +++ + S KSDV+ YG+ L E F+
Sbjct: 259 GDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKIISS 282
+G G++G+V G VA+K F + K E +LK ++H N++ ++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 283 CSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ + ++ ++ L + D Q L + + L+Y+H S
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 154
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
++H D+KPSN+ +++D + DFG+A+
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 33/171 (19%)
Query: 213 LLLATDHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKV---------FHLQ--FDGALKS 260
+L+ +F IG G+FG + G+ L E VAIK+ HL+ F L S
Sbjct: 4 VLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGS 63
Query: 261 FDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI 320
D +V C G + A+VLE + SLE + + L I
Sbjct: 64 GDGIPQVY----------YFGPC--GKYNAMVLELLGP-SLEDLFDLCDRTFSLKTVLMI 110
Query: 321 MIDVALALEYLHFGYSNPVVHCDIKPSNVLL-----DDDMVAHLSDFGIAK 366
I + +EY+H S +++ D+KP N L+ V H+ DFG+AK
Sbjct: 111 AIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALK------SFDAECEVLKS 270
D++ +G G F V K R G++ A K + + + + E +LK
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 271 VRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEY 330
++H N++ + N L+ E +A G L L + + + + + + Y
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVYY 129
Query: 331 LHFGYSNPVVHCDIKPSNVLLDDDMVA----HLSDFGIAKLLN 369
LH S + H D+KP N++L D V + DFG+A ++
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 224 SLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHRNLVKII 280
S +G G++G+V G VA+K F + K E +LK ++H N++ ++
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 281 SSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
+ + ++ ++ L + D Q L + + L+Y+H
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH--- 148
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
S ++H D+KPSN+ +++D + DFG+A+
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 NLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N+VK++ + + + +L+ EY+ N K LY + DI R I ++ AL+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDI--RYYIY-ELLKALDYCH 142
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLN-GKE 372
S ++H D+KP NV++D ++ L D+G+A+ + GKE
Sbjct: 143 ---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 NLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N+VK++ + + + +L+ EY+ N K LY + DI R I ++ AL+Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDI--RYYIY-ELLKALDYCH 143
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLN-GKE 372
S ++H D+KP NV++D ++ L D+G+A+ + GKE
Sbjct: 144 ---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 182
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 26 FDFSSNSLNGSLPLDI-ENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGP 84
D +NSL SLP + + + + ++ L N L LT+L L+L N+LQ
Sbjct: 33 LDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSL 91
Query: 85 IPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLK 130
F +LT L+ L L+ N L + +KL LKDL L N+LK
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIEN-MKVVVEINLSRNYLTGD 60
L L +N L S+ F L S+ N L SLP + N + + +NLS N L
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSL 91
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLK 120
LT L+ L+L N+LQ F +LT L+ L L N L V ++L L+
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 151
Query: 121 DLNLSFNRLKGDIP 134
+ L N P
Sbjct: 152 YIWLHDNPWDCTCP 165
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 226 IGIGSFGTVYKGRFLDGME-VAIKV---------FHLQFDGALKSFDAECEVLKSVRHRN 275
IG G+FG + G+ L E VAIK+ HL++ K + E L V +
Sbjct: 8 IGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYR-FYKQLGSAGEGLPQVYYFG 66
Query: 276 LVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY 335
G + A+VLE + SLE + + L I I + +EY+H
Sbjct: 67 --------PXGKYNAMVLELLGP-SLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVH--- 114
Query: 336 SNPVVHCDIKPSNVLL-----DDDMVAHLSDFGIAK 366
S +++ D+KP N L+ + V H+ DFG+AK
Sbjct: 115 SKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 224 SLIGIGSFGTVYKG-RFLDGMEVAIKVFH----LQFDGALKSFDAECEVL------KSVR 272
L+G G FGTV+ G R D ++VAIKV L + S EV
Sbjct: 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96
Query: 273 HRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
H +++++ LVLE + G L V A+++ H
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH 156
Query: 333 FGYSNPVVHCDIKPSNVLLD-DDMVAHLSDFGIAKLLN 369
S VVH DIK N+L+D A L DFG LL+
Sbjct: 157 ---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH 191
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 NLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N+VK++ + + + +L+ EY+ N K LY + DI R I ++ AL+Y H
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDI--RYYIY-ELLKALDYCH 144
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLN-GKE 372
S ++H D+KP NV++D ++ L D+G+A+ + GKE
Sbjct: 145 ---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 183
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 NLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N+VK++ + + + +L+ EY+ N K LY + DI R I ++ AL+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDI--RYYIY-ELLKALDYCH 142
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLN-GKE 372
S ++H D+KP NV++D ++ L D+G+A+ + GKE
Sbjct: 143 ---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 NLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N+VK++ + + + +L+ EY+ N K LY + DI R I ++ AL+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDI--RYYIY-ELLKALDYCH 142
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLN-GKE 372
S ++H D+KP NV++D ++ L D+G+A+ + GKE
Sbjct: 143 ---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 NLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N+VK++ + + + +L+ EY+ N K LY + DI R I ++ AL+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDI--RYYIY-ELLKALDYCH 142
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLN-GKE 372
S ++H D+KP NV++D ++ L D+G+A+ + GKE
Sbjct: 143 ---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 30/206 (14%)
Query: 225 LIGIGSFGTVYKGRFLDGMEV-AIKVFHLQFDGALKSFDAEC-----EVLKSVRHRNLVK 278
++G GSFG V E+ AIK+ L+ D ++ D EC VL + +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 279 IISSC-SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN 337
+ SC + V+EY+ G L + G Q + ++++ L +LH
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHI-QQVGKFKEPQAVFYAAEISIGLFFLH---KR 139
Query: 338 PVVHCDIKPSNVLLDDDMVAHLSDFGIAK--LLNG---------KESMRTQTLATIEYGR 386
+++ D+K NV+LD + ++DFG+ K +++G + + + +A YG+
Sbjct: 140 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGK 199
Query: 387 EGQVSPKSDVYGYGITLIETFTKKKP 412
D + YG+ L E + P
Sbjct: 200 ------SVDWWAYGVLLYEMLAGQPP 219
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 NLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N+VK++ + + + +L+ EY+ N K LY + DI R I ++ AL+Y H
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDI--RYYIY-ELLKALDYCH 163
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLN-GKE 372
S ++H D+KP NV++D ++ L D+G+A+ + GKE
Sbjct: 164 ---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 202
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 NLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N+VK++ + + + +L+ EY+ N K LY + DI R I ++ AL+Y H
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDI--RYYIY-ELLKALDYCH 143
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLN-GKE 372
S ++H D+KP NV++D ++ L D+G+A+ + GKE
Sbjct: 144 ---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 182
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 226 IGIGSFGTVYKG------RFLDGMEVAIKVFHLQFDGAL----KSFDAECEVLKSVRHR- 274
+G G+FG V + + VA+K+ +GA ++ +E ++L + H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 92
Query: 275 NLVKIISSCSN-GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYL-- 331
N+V ++ +C+ G +++E+ G+L L S ++ + L LE+L
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 332 ---------HFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNGKESM 374
F S +H D+ N+LL + V + DFG+A+ + G +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 375 RTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ +A E + + +SDV+ +G+ L E F+
Sbjct: 213 PLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 39/212 (18%)
Query: 213 LLLATDHFSEKSLIGIGSFGTVYKGR-FLDGMEVAIKVFHLQFDGALKSFDAECEVL--K 269
++ +D + IG G+FG R L VA+K GA + + E++ +
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER---GAAIDENVQREIINHR 71
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----YSSNGILDIFQRLSIMIDV 324
S+RH N+V+ A+++EY + G L + + +S + FQ+L
Sbjct: 72 SLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL------ 125
Query: 325 ALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLS--DFGIAKLLNGKESMRTQTLATI 382
L + + +S + H D+K N LLD L DFG +K + +Q +T+
Sbjct: 126 ---LSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTV 178
Query: 383 EYGREGQVSPK-----------SDVYGYGITL 403
G ++P+ +DV+ G+TL
Sbjct: 179 --GTPAYIAPEVLLRQEYDGKIADVWSCGVTL 208
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 NLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N+VK++ + + + +L+ EY+ N K LY + DI R I ++ AL+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDI--RYYIY-ELLKALDYCH 142
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLN-GKE 372
S ++H D+KP NV++D ++ L D+G+A+ + GKE
Sbjct: 143 ---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-SNGILDIFQRLSIMI 322
E ++L+ V R +V + + + LVL M G L+ +Y + +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 323 DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365
++ LE LH +V+ D+KP N+LLDD +SD G+A
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 275 NLVKIISSCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
N+VK++ + + + +L+ EY+ N K LY + DI R I ++ AL+Y H
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDF-KVLYPTLTDYDI--RYYIY-ELLKALDYCH 142
Query: 333 FGYSNPVVHCDIKPSNVLLDDDMVA-HLSDFGIAKLLN-GKE 372
S ++H D+KP NV++D ++ L D+G+A+ + GKE
Sbjct: 143 ---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 40/216 (18%)
Query: 226 IGIGSFGTVYKG------RFLDGMEVAIKVFHLQFDGAL----KSFDAECEVLKSVRHR- 274
+G G+FG V + + VA+K+ +GA ++ +E ++L + H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 93
Query: 275 NLVKIISSCSN-GNFEALVLEYMANGSLEKCL---------YSSNGILDIFQRLSIMI-- 322
N+V ++ +C+ G +++E+ G+L L Y + F L +I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 323 --DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNGKE 372
VA +E+L S +H D+ N+LL + V + DFG+A+ + G
Sbjct: 154 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 373 SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ + +A E + + +SDV+ +G+ L E F+
Sbjct: 211 RLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 38/214 (17%)
Query: 226 IGIGSFGTVYKG------RFLDGMEVAIKVFHLQFDGAL----KSFDAECEVLKSVRHR- 274
+G G+FG V + + VA+K+ +GA ++ +E ++L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 91
Query: 275 NLVKIISSCSN-GNFEALVLEYMANGSLEKCLYSSNG-----------ILDIFQRLSIMI 322
N+V ++ +C+ G +++E+ G+L L S L + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 323 DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNGKESM 374
VA +E+L S +H D+ N+LL + V + DFG+A+ + G +
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 375 RTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ +A E + + +SDV+ +G+ L E F+
Sbjct: 209 PLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSC- 283
IG GSFG +Y G G EVAIK+ ++ E + K ++ + I C
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKLECVKTKHP--QLHIESKFYKMMQGGVGIPSIKWCG 74
Query: 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
+ G++ +V+E + SLE + + L + + +EY+H S +H D
Sbjct: 75 AEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRD 130
Query: 344 IKPSNVLL---DDDMVAHLSDFGIAK 366
+KP N L+ + ++ DFG+AK
Sbjct: 131 VKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPL-DIENMKVVVEINLSRNYLTGD 60
L L N L +V S L SI + D +S + PL + N++V+ L N +T
Sbjct: 96 LELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLY---LDLNQITNI 150
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPI-SLEKL--V 117
P + GLTNLQ LS+ NN++ P L+ L +L N +S + P+ SL L V
Sbjct: 151 SP--LAGLTNLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISPLASLPNLIEV 206
Query: 118 YLKD 121
+LKD
Sbjct: 207 HLKD 210
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKIISS 282
IG G+ G V + G+ VA+K F + A E +LK V H+N++ +++
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 283 CSNGN----FE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL-ALEYLHFGY 335
+ F+ LV+E M + +L + ++ LD +R+S ++ L +++LH
Sbjct: 90 FTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LD-HERMSYLLYQMLCGIKHLH--- 141
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
S ++H D+KPSN+++ D + DFG+A+
Sbjct: 142 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 340 VHCDIKPSNVLLDDDMVAHLSDFGIA-KLLNGKESMRTQTLATIEYG-----REGQVSPK 393
H D+KP N+L+ D A+L DFGIA + K + T+ T+ Y E + +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 394 SDVYGYGITLIETFTKKKP 412
+D+Y L E T P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 27/220 (12%)
Query: 261 FDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEK--CLYSSNGILDIFQRL 318
E V K H N+V ++ N +V +MA GS + C + +G+ ++
Sbjct: 57 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL-AIA 115
Query: 319 SIMIDVALALEYLH-FGYSNPVVHCDIKPSNVLLDDDMVAHLSDF--GIAKLLNGKESMR 375
I+ V AL+Y+H GY VH +K S++L+ D +LS ++ + +G+
Sbjct: 116 YILQGVLKALDYIHHMGY----VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV 171
Query: 376 TQTLATIEYGREGQVSP------------KSDVYGYGITLIETFTKKKPTCEIFCEEMNL 423
+SP KSD+Y GIT E P ++ +M L
Sbjct: 172 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 231
Query: 424 KNWVNDFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463
+ +N +P ++DTS + E+ + + +S LS
Sbjct: 232 EK-LNGTVPC----LLDTSTIPAEELTMSPSRSVANSGLS 266
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 264 ECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYS-SNGILDIFQRLSIMI 322
E ++L+ V R +V + + + LVL M G L+ +Y + +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 323 DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365
++ LE LH +V+ D+KP N+LLDD +SD G+A
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 18/151 (11%)
Query: 226 IGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKIISS 282
IG G+ G V + G+ VA+K F + A E +LK V H+N++ +++
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 283 CSNGN----FE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALEYLHFGY 335
+ F+ LV+E M + +L + ++ LD +R+S ++ + +++LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LD-HERMSYLLYQMLCGIKHLH--- 143
Query: 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
S ++H D+KPSN+++ D + DFG+A+
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 38/214 (17%)
Query: 226 IGIGSFGTVYKG------RFLDGMEVAIKVFHLQFDGAL----KSFDAECEVLKSVRHR- 274
+G G+FG V + + VA+K+ +GA ++ +E ++L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 91
Query: 275 NLVKIISSCSN-GNFEALVLEYMANGSLEKCLYSSNG-----------ILDIFQRLSIMI 322
N+V ++ +C+ G +++E+ G+L L S L + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 323 DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNGKESM 374
VA +E+L S +H D+ N+LL + V + DFG+A+ + G +
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 375 RTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ +A E + + +SDV+ +G+ L E F+
Sbjct: 209 PLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 20 LNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79
LN++ +FS+N L PL +N+ +V+I ++ N + DI P + LTNL L+L NN
Sbjct: 62 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQI-ADITP-LANLTNLTGLTLFNN 117
Query: 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLN 123
++ P LT+L L+LS N +S + +L L L+ LN
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLN 157
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 7 NELSSVIPSTFWNLNSILSFDFSSNSLNG-SLPLDIENMKVVVEINLSRNYLTGDIPPTI 65
N+++ + P NL ++ D SSN ++ S+ + N++ ++ + N DI P +
Sbjct: 160 NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI----ATNNQISDITP-L 212
Query: 66 GGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPIS-LEKLVYLK 120
G LTNL LSL N+L+ + LT+L LDL+ N +S + P+S L KL LK
Sbjct: 213 GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 266
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
LSL N+L + T +L ++ D ++N ++ PL + + E+ L N ++ +I
Sbjct: 221 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NI 275
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPI-SLEKLVYL 119
P + GLT L L L N+L+ P L +L L L NN+S + P+ SL KL L
Sbjct: 276 SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRL 331
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 20 LNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79
LN++ +FS+N L PL +N+ +V+I ++ N + DI P + LTNL L+L NN
Sbjct: 62 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQI-ADITP-LANLTNLTGLTLFNN 117
Query: 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLN 123
++ P LT+L L+LS N +S + +L L L+ LN
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLN 157
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
Query: 7 NELSSVIPSTFWNLNSILSFDFSSNSLNG-SLPLDIENMKVVVEINLSRNYLTGDIPPTI 65
N+++ + P NL ++ D SSN ++ S+ + N++ ++ + N DI P +
Sbjct: 160 NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI----ATNNQISDITP-L 212
Query: 66 GGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPIS-LEKLVYLK 120
G LTNL LSL N+L+ + LT+L LDL+ N +S + P+S L KL LK
Sbjct: 213 GILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 266
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
LSL N+L + T +L ++ D ++N ++ PL + + E+ L N ++ +I
Sbjct: 221 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NI 275
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPI-SLEKLVYL 119
P + GLT L L L N+L+ P L +L L L NN+S + P+ SL KL L
Sbjct: 276 SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRL 331
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + FG+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVL 350
V+EY+ G L + + + R +++LAL YLH +++ D+K NVL
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 185
Query: 351 LDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSP---KSDVYGY-------G 400
LD + L+D+G+ KE +R + G ++P + + YG+ G
Sbjct: 186 LDSEGHIKLTDYGMC-----KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALG 240
Query: 401 ITLIETFTKKKP 412
+ + E + P
Sbjct: 241 VLMFEMMAGRSP 252
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 27/220 (12%)
Query: 261 FDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEK--CLYSSNGILDIFQRL 318
E V K H N+V ++ N +V +MA GS + C + +G+ ++
Sbjct: 73 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL-AIA 131
Query: 319 SIMIDVALALEYLH-FGYSNPVVHCDIKPSNVLLDDDMVAHLSDF--GIAKLLNGKESMR 375
I+ V AL+Y+H GY VH +K S++L+ D +LS ++ + +G+
Sbjct: 132 YILQGVLKALDYIHHMGY----VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV 187
Query: 376 TQTLATIEYGREGQVSP------------KSDVYGYGITLIETFTKKKPTCEIFCEEMNL 423
+SP KSD+Y GIT E P ++ +M L
Sbjct: 188 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 247
Query: 424 KNWVNDFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463
+ +N +P ++DTS + E+ + + +S LS
Sbjct: 248 EK-LNGTVPC----LLDTSTIPAEELTMSPSRSVANSGLS 282
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 225 LIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISS 282
L+G G++ V L +G E A+K+ Q + E E L + ++N++++I
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 283 CSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHC 342
+ LV E + GS+ + + + ++ DVA AL++LH + + H
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHIQKQKH-FNEREASRVVRDVAAALDFLH---TKGIAHR 135
Query: 343 DIKPSNVLLD 352
D+KP N+L +
Sbjct: 136 DLKPENILCE 145
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Query: 12 VIPSTFWNLNSILSFDFSSNSLNGSLPLDIE-NMKVVVEINLSRNYLTGDIPPTIGGLTN 70
+ S F L + DF ++L + +++ ++ +++S + GL++
Sbjct: 387 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 446
Query: 71 LQLLSLENNRLQ-GPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRL 129
L++L + N Q +P+ F EL +L LDLS L + P + L L+ LN++ N+L
Sbjct: 447 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL 506
Query: 130 K 130
K
Sbjct: 507 K 507
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 46 VVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQG-PIPESFGELTSLESLDLSVNN 104
V VE NL+ + P IG L L+ L++ +N +Q +PE F LT+LE LDLS N
Sbjct: 106 VAVETNLAS---LENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160
Query: 105 LSGVIPISLEKL 116
+ + L L
Sbjct: 161 IQSIYCTDLRVL 172
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVL 350
V+EY+ G L + + + R +++LAL YLH +++ D+K NVL
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 153
Query: 351 LDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSP---KSDVYGY-------G 400
LD + L+D+G+ KE +R + G ++P + + YG+ G
Sbjct: 154 LDSEGHIKLTDYGMC-----KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALG 208
Query: 401 ITLIETFTKKKP 412
+ + E + P
Sbjct: 209 VLMFEMMAGRSP 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + D G+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
L+D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 163 LIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 223 ASMIFRKEP 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVL 350
V+EY+ G L + + + R +++LAL YLH +++ D+K NVL
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 138
Query: 351 LDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSP---KSDVYGY-------G 400
LD + L+D+G+ KE +R + G ++P + + YG+ G
Sbjct: 139 LDSEGHIKLTDYGMC-----KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALG 193
Query: 401 ITLIETFTKKKP 412
+ + E + P
Sbjct: 194 VLMFEMMAGRSP 205
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + D G+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVL 350
V+EY+ G L + + + R +++LAL YLH +++ D+K NVL
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 142
Query: 351 LDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSP---KSDVYGY-------G 400
LD + L+D+G+ KE +R + G ++P + + YG+ G
Sbjct: 143 LDSEGHIKLTDYGMC-----KEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALG 197
Query: 401 ITLIETFTKKKP 412
+ + E + P
Sbjct: 198 VLMFEMMAGRSP 209
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 88/256 (34%), Gaps = 65/256 (25%)
Query: 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFD----- 262
F LL + K IG GS+G V ++ AI+ + ++ +
Sbjct: 16 FQGGSLLELQKKYHLKGAIGQGSYGVVRVA--IENQTRAIRAIKIMNKNKIRQINPKDVE 73
Query: 263 ---AECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSL------------EKC--- 304
E ++K + H N+ ++ + + LV+E G L KC
Sbjct: 74 RIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMD 133
Query: 305 --------------------LYSSNGILDIFQRL----SIMIDVALALEYLHFGYSNPVV 340
++ LD QR +IM + AL YLH + +
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGIC 190
Query: 341 HCDIKPSNVLL--DDDMVAHLSDFGIAK---LLNGKESMRTQTLATIEYGREGQV----- 390
H DIKP N L + L DFG++K LN E T A Y +V
Sbjct: 191 HRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250
Query: 391 ---SPKSDVYGYGITL 403
PK D + G+ L
Sbjct: 251 ESYGPKCDAWSAGVLL 266
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 52 LSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPES-FGELTSLESLDLSVNNLSGVIP 110
L N +T P L NL+ L L +N+L G +P F LT L LDL N L+ +
Sbjct: 47 LHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPS 105
Query: 111 ISLEKLVYLKDLNLSFNRL 129
++LV+LK+L + N+L
Sbjct: 106 AVFDRLVHLKELFMCCNKL 124
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L LGSN+L ++ F +L + D +N L + + + E+ + N LT ++
Sbjct: 69 LYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-EL 127
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSL 95
P I LT+L L+L+ N+L+ +F L+SL
Sbjct: 128 PRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSL 161
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 25/129 (19%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L L N+++ + P F +L ++ SN L G+LP+ +
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGV-------------------- 83
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKD 121
LT L +L L N+L F L L+ L + N L+ +P +E+L +L
Sbjct: 84 ---FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTH 139
Query: 122 LNLSFNRLK 130
L L N+LK
Sbjct: 140 LALDQNQLK 148
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 226 IGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRN--------L 276
+G G F TV+ + G + VA+KV + D E +LKSVR+ + +
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD-EIRLLKSVRNSDPNDPNREMV 87
Query: 277 VKIIS----SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
V+++ S NG +V E + + L+ + S+ L + I+ V L+YLH
Sbjct: 88 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH 147
Query: 333 FGYSNPVVHCDIKPSNVLL 351
++H DIKP N+LL
Sbjct: 148 TKCR--IIHTDIKPENILL 164
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 22/176 (12%)
Query: 226 IGIGSFGTVYKG--RFLDGMEVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKIIS 281
IG G+ G V LD VAIK F + A E ++K V H+N++ +++
Sbjct: 32 IGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 282 SCSNGN----FE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL-ALEYLHFG 334
+ F+ LV+E M + +L + + LD +R+S ++ L +++LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LD-HERMSYLLYQMLXGIKHLH-- 143
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV 390
S ++H D+KPSN+++ D + DFG+A+ G M T + T Y R +V
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVT-RYYRAPEV 196
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 218 DHFSEKSLIGIGSFGTVYKG-RFLDGMEVAIKVFHLQFDGAL--KSFDAECEVLKSVRHR 274
+ + S +G G++G+V G+ VA+K F + K E +LK ++H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 275 NLVKIISSCSNGNF-----EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALE 329
N++ ++ + + ++ ++ L + D Q L + + L+
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLK 139
Query: 330 YLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366
Y+H S ++H D+KPSN+ +++D + D G+A+
Sbjct: 140 YIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 37/165 (22%)
Query: 291 LVLEYMANGSL-EKCL------YSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343
L+LEY A G + CL S N ++ + +++ LE +++ + N +VH D
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQI---------LEGVYYLHQNNIVHLD 156
Query: 344 IKPSNVLLDD-----DMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE-----GQVSPK 393
+KP N+LL D+ + DFG+++ + +R + + T EY ++
Sbjct: 157 LKPQNILLSSIYPLGDI--KIVDFGMSRKIGHACELR-EIMGTPEYLAPEILNYDPITTA 213
Query: 394 SDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVNDFLPISVMNV 438
+D++ GI T P F E N + ++N IS +NV
Sbjct: 214 TDMWNIGIIAYMLLTHTSP----FVGEDNQETYLN----ISQVNV 250
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 226 IGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRN--------L 276
+G G F TV+ + G + VA+KV + D E +LKSVR+ + +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD-EIRLLKSVRNSDPNDPNREMV 103
Query: 277 VKIIS----SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
V+++ S NG +V E + + L+ + S+ L + I+ V L+YLH
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH 163
Query: 333 FGYSNPVVHCDIKPSNVLL 351
++H DIKP N+LL
Sbjct: 164 TKCR--IIHTDIKPENILL 180
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 109 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 161
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 162 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 221
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 222 ASMIFRKEP 230
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 223 ASMIFRKEP 231
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 223 ASMIFRKEP 231
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 108 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 160
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 221 ASMIFRKEP 229
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 37/211 (17%)
Query: 213 LLLATDHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVL--K 269
++ +D + IG G+FG R E VA+K G + + + E++ +
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER---GEKIAANVKREIINHR 70
Query: 270 SVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCL-----YSSNGILDIFQRLSIMIDV 324
S+RH N+V+ A+V+EY + G L + + +S + FQ+L +
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 325 ALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLS--DFGIAK--LLNGKESMRTQTLA 380
A++ V H D+K N LLD L DFG +K +L+ + T A
Sbjct: 131 CHAMQ---------VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPA 181
Query: 381 TI--------EYGREGQVSPKSDVYGYGITL 403
I EY +G+V +DV+ G+TL
Sbjct: 182 YIAPEVLLKKEY--DGKV---ADVWSCGVTL 207
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 109 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 161
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 162 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 221
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 222 ASMIFRKEP 230
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 223 ASMIFRKEP 231
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 223 ASMIFRKEP 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 223 ASMIFRKEP 231
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 23/171 (13%)
Query: 226 IGIGSFGTVYKGRFLDGM---EVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKII 280
IG G+ G V D + VAIK F + A E ++K V H+N++ ++
Sbjct: 32 IGSGAQGIVVAA--YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 281 S----SCSNGNFE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMI-DVALALEYLHF 333
+ S F+ +V+E M + +L + + LD +R+S ++ + + +++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQME---LD-HERMSYLLYQMLVGIKHLH- 143
Query: 334 GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEY 384
S ++H D+KPSN+++ D + DFG+A+ G M T + T Y
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYY 191
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 223 ASMIFRKEP 231
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 22/176 (12%)
Query: 226 IGIGSFGTVYKG--RFLDGMEVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKIIS 281
IG G+ G V LD VAIK F + A E ++K V H+N++ +++
Sbjct: 25 IGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83
Query: 282 SCSNGN----FE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL-ALEYLHFG 334
+ F+ LV+E M + +L + + LD +R+S ++ L +++LH
Sbjct: 84 VFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LD-HERMSYLLYQMLXGIKHLH-- 136
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV 390
S ++H D+KPSN+++ D + DFG+A+ G M T + T Y R +V
Sbjct: 137 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVT-RYYRAPEV 189
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 223 ASMIFRKEP 231
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L L S L+++ +TF L + + N L +++ + + L+ N L
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKD 121
LT L L L N+L+ F LT L+ L L+ N L + + +KL L+
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQT 159
Query: 122 LNLSFNRLK 130
L+LS N+L+
Sbjct: 160 LSLSTNQLQ 168
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDI-ENMKVVVEINLSRNYLTGD 60
L L +N+L+S+ F +L + N L SLP + + + + E+ L+ N L
Sbjct: 88 LGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSI 146
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDL 100
LTNLQ LSL N+LQ +F L L+++ L
Sbjct: 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 223 ASMIFRKEP 231
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 163 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 223 ASMIFRKEP 231
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 20 LNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79
LN++ +FS+N L PL +N+ +V+I ++ N + DI P + LTNL L+L NN
Sbjct: 67 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQI-ADITP-LANLTNLTGLTLFNN 122
Query: 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPIS 112
++ P LT+L L+LS N +S + +S
Sbjct: 123 QITDIDP--LKNLTNLNRLELSSNTISDISALS 153
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNG-SLPLDIENMKVVVEINLSRNYLTGD 60
LS G N+++ + P NL ++ D SSN ++ S+ + N++ ++ + N D
Sbjct: 161 LSFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI----ATNNQISD 213
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPIS-LEKLVYL 119
I P +G LTNL LSL N+L+ + LT+L LDL+ N +S + P+S L KL L
Sbjct: 214 ITP-LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 270
Query: 120 K 120
K
Sbjct: 271 K 271
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
LSL N+L + T +L ++ D ++N ++ PL + + E+ L N ++ +I
Sbjct: 226 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NI 280
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPI-SLEKLVYL 119
P + GLT L L L N+L+ P L +L L L NN+S + P+ SL KL L
Sbjct: 281 SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRL 336
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
L L S L+++ +TF L + + N L +++ + + L+ N L
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKD 121
LT L L L N+L+ F LT L+ L L+ N L + + +KL L+
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQT 159
Query: 122 LNLSFNRLK 130
L+LS N+L+
Sbjct: 160 LSLSTNQLQ 168
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDI-ENMKVVVEINLSRNYLTGD 60
L L +N+L+S+ F +L + N L SLP + + + + E+ L+ N L
Sbjct: 88 LGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSI 146
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDL 100
LTNLQ LSL N+LQ +F L L+++ L
Sbjct: 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349
ALV E++ N K LY + DI M ++ AL+Y H S ++H D+KP NV
Sbjct: 115 ALVFEHVNNTDF-KQLYQTLTDYDI---RFYMYEILKALDYCH---SMGIMHRDVKPHNV 167
Query: 350 LLDDDMVA-HLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKS-----DVYGYGITL 403
++D + L D+G+A+ + + + + G E V + D++ G L
Sbjct: 168 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 227
Query: 404 IETFTKKKP 412
+K+P
Sbjct: 228 ASMIFRKEP 236
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 22/176 (12%)
Query: 226 IGIGSFGTVYKG--RFLDGMEVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKIIS 281
IG G+ G V LD VAIK F + A E ++K V H+N++ +++
Sbjct: 32 IGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 282 SCSNGN----FE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL-ALEYLHFG 334
+ F+ LV+E M + +L + + LD +R+S ++ L +++LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LD-HERMSYLLYQMLCGIKHLH-- 143
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV 390
S ++H D+KPSN+++ D + DFG+A+ G M T + T Y R +V
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVT-RYYRAPEV 196
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 22/176 (12%)
Query: 226 IGIGSFGTVYKG--RFLDGMEVAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKIIS 281
IG G+ G V LD VAIK F + A E ++K V H+N++ +++
Sbjct: 32 IGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 90
Query: 282 SCSNGN----FE--ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVAL-ALEYLHFG 334
+ F+ LV+E M + +L + + LD +R+S ++ L +++LH
Sbjct: 91 VFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LD-HERMSYLLYQMLXGIKHLH-- 143
Query: 335 YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQV 390
S ++H D+KPSN+++ D + DFG+A+ G M T + T Y R +V
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVT-RYYRAPEV 196
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 20 LNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79
LN++ +FS+N L PL +N+ +V+I ++ N + DI P + LTNL L+L NN
Sbjct: 66 LNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNNQI-ADITP-LANLTNLTGLTLFNN 121
Query: 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPIS 112
++ P LT+L L+LS N +S + +S
Sbjct: 122 QITDIDP--LKNLTNLNRLELSSNTISDISALS 152
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 12/121 (9%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNG-SLPLDIENMKVVVEINLSRNYLTGD 60
LS G N+++ + P NL ++ D SSN ++ S+ + N++ ++ + N D
Sbjct: 160 LSFG-NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLI----ATNNQISD 212
Query: 61 IPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPIS-LEKLVYL 119
I P +G LTNL LSL N+L+ + LT+L LDL+ N +S + P+S L KL L
Sbjct: 213 ITP-LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 269
Query: 120 K 120
K
Sbjct: 270 K 270
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDI 61
LSL N+L + T +L ++ D ++N ++ PL + + E+ L N ++ +I
Sbjct: 225 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQIS-NI 279
Query: 62 PPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPI-SLEKLVYL 119
P + GLT L L L N+L+ P L +L L L NN+S + P+ SL KL L
Sbjct: 280 SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRL 335
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
Query: 245 VAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKIIS----SCSNGNFE--ALVLEYM 296
VAIK F + A E ++K V H+N++ +++ S F+ +V+E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 297 ANGSLEKCLYSSNGILDIFQRLSIMI-DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM 355
+ +L + + LD +R+S ++ + + +++LH S ++H D+KPSN+++ D
Sbjct: 112 -DANLSQVIQME---LD-HERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDA 163
Query: 356 VAHLSDFGIAKLLNGKESMRTQTLATIEY 384
+ DFG+A+ G M T + T Y
Sbjct: 164 TLKILDFGLARTA-GTSFMMTPYVVTRYY 191
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 33/171 (19%)
Query: 213 LLLATDHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKV---------FHLQ--FDGALKS 260
+L+ +F IG G+FG + G+ L E VAIK+ HL+ F L S
Sbjct: 4 VLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGS 63
Query: 261 FDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSI 320
D +V C G + A+VLE + SLE + + L I
Sbjct: 64 GDGIPQVY----------YFGPC--GKYNAMVLELLGP-SLEDLFDLCDRTFSLKTVLMI 110
Query: 321 MIDVALALEYLHFGYSNPVVHCDIKPSNVLL-----DDDMVAHLSDFGIAK 366
I + +EY+H S +++ D+KP N L+ V H+ DF +AK
Sbjct: 111 AIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 33/176 (18%)
Query: 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGME-VAIKV---------FHLQ--FD 255
F +L+ +F IG G+FG + G+ L E VAIK+ HL+ F
Sbjct: 20 FQSMGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFY 79
Query: 256 GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIF 315
L S D +V C G + A+VLE + SLE + +
Sbjct: 80 KQLGSGDGIPQVY----------YFGPC--GKYNAMVLELLGP-SLEDLFDLCDRTFSLK 126
Query: 316 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL-----DDDMVAHLSDFGIAK 366
L I I + +EY+H S +++ D+KP N L+ V H+ DF +AK
Sbjct: 127 TVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 179
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 42/218 (19%)
Query: 226 IGIGSFGTVYKG------RFLDGMEVAIKVFHLQFDGAL----KSFDAECEVLKSVRHR- 274
+G G+FG V + + VA+K+ +GA ++ +E ++L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 82
Query: 275 NLVKIISSCSN-GNFEALVLEYMANGSLEKCLYSSNG---------------ILDIFQRL 318
N+V ++ +C+ G +++E+ G+L L S L + +
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNG 370
VA +E+L S +H D+ N+LL + V + DFG+A+ + G
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 371 KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ + +A E + + +SDV+ +G+ L E F+
Sbjct: 200 DARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
Query: 245 VAIKVFHLQFDGALKSFDA--ECEVLKSVRHRNLVKIIS----SCSNGNFE--ALVLEYM 296
VAIK F + A E ++K V H+N++ +++ S F+ +V+E M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 297 ANGSLEKCLYSSNGILDIFQRLSIMI-DVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM 355
+ +L + + LD +R+S ++ + + +++LH S ++H D+KPSN+++ D
Sbjct: 112 -DANLSQVIQME---LD-HERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDA 163
Query: 356 VAHLSDFGIAKLLNGKESMRTQTLATIEY 384
+ DFG+A+ G M T + T Y
Sbjct: 164 TLKILDFGLARTA-GTSFMMTPYVVTRYY 191
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 42/218 (19%)
Query: 226 IGIGSFGTVYKG------RFLDGMEVAIKVFHLQFDGAL----KSFDAECEVLKSVRHR- 274
+G G+FG V + + VA+K+ +GA ++ +E ++L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 91
Query: 275 NLVKIISSCSN-GNFEALVLEYMANGSLEKCLYSSNG---------------ILDIFQRL 318
N+V ++ +C+ G +++E+ G+L L S L + +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNG 370
VA +E+L S +H D+ N+LL + V + DFG+A+ + G
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 371 KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ + +A E + + +SDV+ +G+ L E F+
Sbjct: 209 DARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 18/150 (12%)
Query: 226 IGIGSFGTVYKGRFLDGME-VAIKVFHLQFDGALKSFDAECEVLKSVRHRN--------L 276
+G G F TV+ + G VA+KV + D E ++LK VR + +
Sbjct: 39 LGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD-EIKLLKCVRESDPSDPNKDMV 97
Query: 277 VKIIS----SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLH 332
V++I S NG +V E + + L+ + S+ L + SI+ V L+YLH
Sbjct: 98 VQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLH 157
Query: 333 FGYSNPVVHCDIKPSNVLL--DDDMVAHLS 360
++H DIKP N+L+ DD V ++
Sbjct: 158 --SKCKIIHTDIKPENILMCVDDAYVRRMA 185
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 2 LSLGSNELSSVIPST--FWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTG 59
L L +NE + V+ +T F L + +FS+N + E V EI L+ N L
Sbjct: 37 LRLNNNEFT-VLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 95
Query: 60 DIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYL 119
GL +L+ L L +NR+ +SF L+S+ L L N ++ V P + + L L
Sbjct: 96 VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSL 155
Query: 120 KDLNLSFN 127
LNL N
Sbjct: 156 STLNLLAN 163
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 42/218 (19%)
Query: 226 IGIGSFGTVYKG------RFLDGMEVAIKVFHLQFDGAL----KSFDAECEVLKSVRHR- 274
+G G+FG V + + VA+K+ +GA ++ +E ++L + H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 128
Query: 275 NLVKIISSCSN-GNFEALVLEYMANGSLEKCLYSSNG---------------ILDIFQRL 318
N+V ++ +C+ G +++E+ G+L L S L + +
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 319 SIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK--------LLNG 370
VA +E+L S +H D+ N+LL + V + DFG+A+ + G
Sbjct: 189 CYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 371 KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT 408
+ + +A E + + +SDV+ +G+ L E F+
Sbjct: 246 DARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 282
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,814,967
Number of Sequences: 62578
Number of extensions: 510982
Number of successful extensions: 3677
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 338
Number of HSP's that attempted gapping in prelim test: 1311
Number of HSP's gapped (non-prelim): 1426
length of query: 467
length of database: 14,973,337
effective HSP length: 102
effective length of query: 365
effective length of database: 8,590,381
effective search space: 3135489065
effective search space used: 3135489065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)