Query 041491
Match_columns 467
No_of_seqs 629 out of 3764
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 12:52:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041491.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041491hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 7E-54 2.4E-58 410.3 12.8 236 218-458 24-275 (350)
2 4fih_A Serine/threonine-protei 100.0 2.2E-53 7.6E-58 406.2 15.6 233 218-457 74-321 (346)
3 4asz_A BDNF/NT-3 growth factor 100.0 7.5E-54 2.6E-58 404.4 11.9 239 217-461 12-284 (299)
4 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-53 4.2E-58 402.0 12.1 231 218-453 32-279 (311)
5 4aoj_A High affinity nerve gro 100.0 5E-53 1.7E-57 404.2 14.3 241 217-463 40-316 (329)
6 4g3f_A NF-kappa-beta-inducing 100.0 4.1E-53 1.4E-57 403.2 13.4 234 217-461 57-311 (336)
7 3ubd_A Ribosomal protein S6 ki 100.0 6.4E-54 2.2E-58 403.9 6.9 239 218-461 24-279 (304)
8 3omv_A RAF proto-oncogene seri 100.0 6.9E-53 2.4E-57 397.9 13.9 241 213-461 31-295 (307)
9 3hyh_A Carbon catabolite-derep 100.0 2E-52 6.8E-57 388.5 15.1 240 218-464 13-268 (275)
10 4fie_A Serine/threonine-protei 100.0 3.9E-52 1.3E-56 407.2 16.5 234 217-458 150-399 (423)
11 4gt4_A Tyrosine-protein kinase 100.0 3.7E-52 1.3E-56 394.6 14.0 240 218-463 26-303 (308)
12 3fpq_A Serine/threonine-protei 100.0 8.2E-52 2.8E-56 387.7 15.6 233 220-458 28-281 (290)
13 4ase_A Vascular endothelial gr 100.0 8.7E-51 3E-55 391.8 12.0 249 208-461 54-342 (353)
14 4g31_A Eukaryotic translation 100.0 8.8E-50 3E-54 377.2 14.6 234 218-458 5-278 (299)
15 3hmm_A TGF-beta receptor type- 100.0 5.4E-49 1.8E-53 373.6 15.4 242 218-464 3-295 (303)
16 4f9c_A Cell division cycle 7-r 100.0 4.8E-48 1.6E-52 375.2 14.3 192 215-415 18-249 (361)
17 4b99_A Mitogen-activated prote 100.0 1.4E-47 4.9E-52 375.7 14.3 232 218-454 54-340 (398)
18 3v5w_A G-protein coupled recep 100.0 2.8E-47 9.6E-52 389.3 15.3 233 216-452 187-438 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 3E-47 1E-51 391.3 14.9 237 217-458 156-409 (573)
20 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-43 4.3E-48 339.4 19.0 242 217-462 9-278 (310)
21 4eqm_A Protein kinase; transfe 100.0 2.6E-44 9E-49 341.4 13.9 244 217-464 10-273 (294)
22 3fxz_A Serine/threonine-protei 100.0 8.9E-44 3E-48 338.2 16.3 232 217-453 19-264 (297)
23 1o6l_A RAC-beta serine/threoni 100.0 1.8E-43 6.2E-48 341.2 15.2 230 217-451 4-248 (337)
24 3uim_A Brassinosteroid insensi 100.0 2E-43 6.9E-48 340.3 14.8 258 205-466 17-311 (326)
25 2qkw_B Protein kinase; three-h 100.0 7.3E-44 2.5E-48 342.7 11.3 251 208-462 29-311 (321)
26 1tki_A Titin; serine kinase, m 100.0 4.2E-43 1.4E-47 337.1 15.9 234 217-455 4-254 (321)
27 3p86_A Serine/threonine-protei 100.0 1.7E-43 5.8E-48 338.0 12.9 246 209-461 28-293 (309)
28 4fr4_A YANK1, serine/threonine 100.0 8.7E-43 3E-47 341.5 17.0 238 217-458 14-270 (384)
29 4aw2_A Serine/threonine-protei 100.0 1E-43 3.4E-48 353.9 10.1 237 209-449 65-327 (437)
30 3fe3_A MAP/microtubule affinit 100.0 2.8E-43 9.7E-48 338.9 12.8 231 216-452 13-258 (328)
31 2vd5_A DMPK protein; serine/th 100.0 2.4E-43 8.3E-48 348.7 12.7 245 209-457 52-325 (412)
32 3zgw_A Maternal embryonic leuc 100.0 3.8E-43 1.3E-47 340.1 13.7 232 217-453 9-255 (347)
33 1fot_A TPK1 delta, CAMP-depend 100.0 4.7E-43 1.6E-47 335.9 14.2 231 217-452 5-247 (318)
34 2yab_A Death-associated protei 100.0 1.1E-42 3.8E-47 338.8 17.1 233 217-453 11-267 (361)
35 4hcu_A Tyrosine-protein kinase 100.0 1.9E-42 6.6E-47 324.2 18.0 244 215-464 7-264 (269)
36 3kul_A Ephrin type-A receptor 100.0 4.8E-43 1.6E-47 337.4 13.6 241 216-462 47-309 (325)
37 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.1E-43 2.1E-47 327.4 13.9 243 216-464 6-262 (268)
38 3ork_A Serine/threonine protei 100.0 1.2E-43 4.2E-48 339.5 9.0 244 217-464 11-279 (311)
39 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.5E-43 8.6E-48 342.5 11.3 235 214-453 19-269 (353)
40 2psq_A Fibroblast growth facto 100.0 1.2E-42 4.2E-47 340.4 16.2 242 216-463 79-361 (370)
41 3gen_A Tyrosine-protein kinase 100.0 3.9E-43 1.3E-47 331.4 12.0 247 212-464 18-278 (283)
42 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.9E-43 1.7E-47 340.2 12.8 233 217-454 40-284 (350)
43 2c30_A Serine/threonine-protei 100.0 3.5E-42 1.2E-46 330.8 17.7 245 206-458 23-293 (321)
44 2y0a_A Death-associated protei 100.0 4.2E-42 1.4E-46 331.0 17.6 237 217-458 10-270 (326)
45 4dc2_A Protein kinase C IOTA t 100.0 1.3E-42 4.3E-47 341.5 14.1 235 215-453 49-307 (396)
46 3niz_A Rhodanese family protei 100.0 2.4E-42 8.2E-47 330.5 15.7 237 217-458 20-299 (311)
47 2bdw_A Hypothetical protein K1 100.0 2.4E-42 8.1E-47 337.2 15.8 235 216-455 27-281 (362)
48 1kob_A Twitchin; kinase, intra 100.0 2.8E-42 9.6E-47 338.9 16.3 237 217-458 50-303 (387)
49 1xjd_A Protein kinase C, theta 100.0 1.1E-42 3.8E-47 336.7 12.7 236 213-453 12-263 (345)
50 3tki_A Serine/threonine-protei 100.0 1.6E-42 5.3E-47 333.5 13.5 232 217-452 6-255 (323)
51 3c0i_A Peripheral plasma membr 100.0 1.5E-42 5E-47 337.6 13.4 233 217-454 23-282 (351)
52 2i0e_A Protein kinase C-beta I 100.0 9.1E-43 3.1E-47 338.4 11.6 234 214-452 16-265 (353)
53 3cbl_A C-FES, proto-oncogene t 100.0 8.9E-43 3E-47 342.5 11.6 246 213-464 109-372 (377)
54 2qol_A Ephrin receptor; recept 100.0 1.8E-42 6.1E-47 339.5 13.5 242 216-463 43-306 (373)
55 3ugc_A Tyrosine-protein kinase 100.0 7E-43 2.4E-47 331.7 10.0 245 216-464 8-289 (295)
56 1ob3_A PFPK5, cell division co 100.0 2.1E-42 7.2E-47 327.3 13.1 231 218-453 2-275 (288)
57 3o0g_A Cell division protein k 100.0 7.3E-42 2.5E-46 324.2 16.8 236 218-458 2-281 (292)
58 3soc_A Activin receptor type-2 100.0 2E-42 6.7E-47 332.8 12.9 242 215-464 21-316 (322)
59 3vhe_A Vascular endothelial gr 100.0 9.5E-43 3.2E-47 340.2 10.7 253 207-463 11-352 (359)
60 3soa_A Calcium/calmodulin-depe 100.0 4.5E-42 1.5E-46 343.2 15.7 234 216-454 9-263 (444)
61 2w4o_A Calcium/calmodulin-depe 100.0 4.3E-42 1.5E-46 333.9 15.2 233 216-454 51-301 (349)
62 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1E-42 3.5E-47 340.7 10.9 242 214-461 61-334 (365)
63 3a8x_A Protein kinase C IOTA t 100.0 4.1E-42 1.4E-46 333.2 14.8 233 217-453 8-264 (345)
64 3v8s_A RHO-associated protein 100.0 1.8E-42 6.1E-47 342.3 12.3 241 210-457 61-327 (410)
65 4f0f_A Serine/threonine-protei 100.0 1.3E-41 4.3E-46 321.7 17.6 243 216-464 17-287 (287)
66 3a62_A Ribosomal protein S6 ki 100.0 4E-42 1.4E-46 331.2 14.3 232 216-452 15-265 (327)
67 3kmu_A ILK, integrin-linked ki 100.0 4.9E-42 1.7E-46 321.5 14.1 243 217-464 9-268 (271)
68 2x4f_A Myosin light chain kina 100.0 6.1E-42 2.1E-46 335.5 15.2 232 222-458 93-341 (373)
69 4fvq_A Tyrosine-protein kinase 100.0 2.8E-42 9.5E-47 326.5 11.9 244 217-464 7-273 (289)
70 3t9t_A Tyrosine-protein kinase 100.0 3.5E-42 1.2E-46 321.9 12.3 242 216-464 6-262 (267)
71 4euu_A Serine/threonine-protei 100.0 1.2E-41 4.1E-46 327.0 15.8 241 217-461 8-304 (319)
72 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.3E-42 7.9E-47 333.2 10.9 233 217-454 8-254 (336)
73 2izr_A Casein kinase I isoform 100.0 7.9E-42 2.7E-46 329.8 14.5 228 217-451 8-267 (330)
74 3qd2_B Eukaryotic translation 100.0 9.7E-42 3.3E-46 329.1 14.7 238 217-458 5-324 (332)
75 2h34_A Serine/threonine-protei 100.0 1.1E-41 3.8E-46 325.7 14.9 243 216-464 32-294 (309)
76 2r5t_A Serine/threonine-protei 100.0 3.8E-42 1.3E-46 336.3 11.8 233 217-454 37-285 (373)
77 2pmi_A Negative RE, cyclin-dep 100.0 1.7E-41 5.7E-46 325.6 16.0 234 216-453 3-288 (317)
78 3f3z_A Calcium/calmodulin-depe 100.0 1.3E-41 4.5E-46 319.9 14.8 235 216-456 7-259 (277)
79 3gni_B Strad alpha; kinase fol 100.0 1.2E-41 4.1E-46 336.1 14.9 235 216-453 23-328 (389)
80 3q4u_A Activin receptor type-1 100.0 1.6E-41 5.4E-46 323.2 15.1 241 217-464 7-300 (301)
81 1luf_A Muscle-specific tyrosin 100.0 4.3E-42 1.5E-46 333.4 11.2 248 211-464 40-333 (343)
82 1csn_A Casein kinase-1; phosph 100.0 2.6E-41 8.8E-46 321.3 15.9 239 217-462 9-279 (298)
83 1qcf_A Haematopoetic cell kina 100.0 4.5E-42 1.5E-46 345.6 11.1 246 210-463 180-441 (454)
84 3op5_A Serine/threonine-protei 100.0 1.1E-41 3.8E-46 333.2 13.6 240 216-460 33-323 (364)
85 3tt0_A Basic fibroblast growth 100.0 2.7E-41 9.3E-46 332.5 16.2 244 214-463 65-349 (382)
86 2zv2_A Calcium/calmodulin-depe 100.0 2E-41 7E-46 322.1 14.7 230 217-453 12-287 (298)
87 2acx_A G protein-coupled recep 100.0 3.6E-41 1.2E-45 343.5 17.3 241 215-458 181-443 (576)
88 3dtc_A Mitogen-activated prote 100.0 1.2E-41 4.1E-46 319.1 12.7 240 217-463 6-270 (271)
89 2a2a_A Death-associated protei 100.0 3E-41 1E-45 324.5 15.7 233 217-453 11-267 (321)
90 1t46_A HOMO sapiens V-KIT hard 100.0 2.1E-41 7.1E-46 324.2 14.3 245 214-463 19-304 (313)
91 4ejn_A RAC-alpha serine/threon 100.0 3.8E-42 1.3E-46 345.6 9.5 231 216-451 146-392 (446)
92 2nru_A Interleukin-1 receptor- 100.0 1E-40 3.4E-45 318.7 18.7 254 205-464 12-304 (307)
93 2ivs_A Proto-oncogene tyrosine 100.0 2E-41 6.7E-46 324.5 13.8 245 214-464 19-309 (314)
94 2buj_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 323.4 15.4 246 215-464 26-304 (317)
95 3hko_A Calcium/calmodulin-depe 100.0 1.7E-41 5.7E-46 329.6 13.3 240 212-455 20-327 (345)
96 3qup_A Tyrosine-protein kinase 100.0 4.4E-42 1.5E-46 330.5 9.1 246 212-462 17-294 (323)
97 1mp8_A Focal adhesion kinase 1 100.0 1.5E-41 5.2E-46 320.2 12.4 242 215-463 12-273 (281)
98 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-41 4.1E-46 333.1 12.1 241 216-462 69-341 (367)
99 3poz_A Epidermal growth factor 100.0 1.5E-41 5.2E-46 327.3 12.6 241 217-464 14-276 (327)
100 3kfa_A Tyrosine-protein kinase 100.0 1.3E-41 4.4E-46 321.8 11.6 245 212-463 7-268 (288)
101 1rjb_A FL cytokine receptor; k 100.0 1.4E-41 4.7E-46 330.1 12.0 246 212-462 39-330 (344)
102 2v62_A Serine/threonine-protei 100.0 1.4E-41 4.7E-46 330.1 12.0 244 217-466 36-328 (345)
103 2eue_A Carbon catabolite derep 100.0 3E-41 1E-45 317.2 13.9 231 218-454 13-258 (275)
104 1k9a_A Carboxyl-terminal SRC k 100.0 4.5E-41 1.5E-45 337.8 16.0 241 213-462 188-441 (450)
105 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.3E-41 2.5E-45 340.4 17.7 234 216-452 183-437 (543)
106 3dls_A PAS domain-containing s 100.0 1.3E-41 4.5E-46 328.6 11.6 237 216-458 22-273 (335)
107 1u5q_A Serine/threonine protei 100.0 2.8E-41 9.4E-46 327.9 13.7 232 217-453 53-300 (348)
108 2eva_A TAK1 kinase - TAB1 chim 100.0 5.6E-41 1.9E-45 320.4 15.5 242 217-464 7-261 (307)
109 2ac3_A MAP kinase-interacting 100.0 3.6E-41 1.2E-45 323.1 14.1 237 217-458 11-294 (316)
110 3lb7_A RAF proto-oncogene seri 100.0 3.8E-41 1.3E-45 321.5 14.1 242 215-463 33-297 (307)
111 3kex_A Receptor tyrosine-prote 100.0 2E-41 6.7E-46 326.3 12.1 241 217-464 12-274 (325)
112 3kk8_A Calcium/calmodulin depe 100.0 4.9E-41 1.7E-45 317.1 14.5 233 217-454 5-257 (284)
113 3og7_A AKAP9-BRAF fusion prote 100.0 3.9E-41 1.3E-45 318.7 13.8 245 214-465 20-287 (289)
114 3uc3_A Serine/threonine-protei 100.0 4.5E-41 1.5E-45 328.2 14.5 232 216-453 18-269 (361)
115 2y94_A 5'-AMP-activated protei 100.0 4.5E-41 1.6E-45 338.1 15.0 236 217-458 15-265 (476)
116 2yex_A Serine/threonine-protei 100.0 8.1E-41 2.8E-45 314.2 15.5 232 217-452 6-255 (276)
117 3cok_A Serine/threonine-protei 100.0 4.4E-41 1.5E-45 316.5 13.7 232 217-452 10-256 (278)
118 1qpc_A LCK kinase; alpha beta 100.0 1.3E-41 4.5E-46 320.3 10.1 242 212-461 7-264 (279)
119 3g33_A Cell division protein k 100.0 9E-41 3.1E-45 319.2 15.7 235 215-454 6-292 (308)
120 3lxl_A Tyrosine-protein kinase 100.0 1.3E-41 4.4E-46 327.9 9.9 244 217-464 22-301 (327)
121 2wqm_A Serine/threonine-protei 100.0 1.4E-40 4.9E-45 318.1 16.6 244 217-464 31-295 (310)
122 1opk_A P150, C-ABL, proto-onco 100.0 6.4E-41 2.2E-45 340.4 15.0 246 212-464 214-476 (495)
123 3kn6_A Ribosomal protein S6 ki 100.0 5.2E-41 1.8E-45 323.1 13.6 227 219-452 9-264 (325)
124 3llt_A Serine/threonine kinase 100.0 5.7E-41 2E-45 327.8 13.9 207 205-416 22-262 (360)
125 3p1a_A MYT1 kinase, membrane-a 100.0 7.1E-41 2.4E-45 320.3 14.0 231 217-452 56-298 (311)
126 1u59_A Tyrosine-protein kinase 100.0 8E-41 2.7E-45 316.3 14.1 240 217-463 8-269 (287)
127 4agu_A Cyclin-dependent kinase 100.0 1E-40 3.4E-45 319.3 14.8 236 218-458 3-283 (311)
128 3fdn_A Serine/threonine-protei 100.0 8.7E-41 3E-45 314.7 13.9 237 216-458 7-256 (279)
129 1nxk_A MAP kinase-activated pr 100.0 2.4E-40 8.3E-45 327.2 17.7 232 218-458 61-320 (400)
130 3bhy_A Death-associated protei 100.0 2.1E-40 7.2E-45 312.6 16.5 233 217-454 4-261 (283)
131 2pvf_A Fibroblast growth facto 100.0 9.9E-41 3.4E-45 322.7 14.6 244 214-463 31-315 (334)
132 3cc6_A Protein tyrosine kinase 100.0 8.8E-41 3E-45 314.9 13.7 241 216-463 10-270 (281)
133 3mtl_A Cell division protein k 100.0 4.5E-41 1.6E-45 323.6 11.8 231 218-453 2-276 (324)
134 3oz6_A Mitogen-activated prote 100.0 2.3E-40 7.8E-45 326.8 17.1 195 216-416 7-234 (388)
135 3ll6_A Cyclin G-associated kin 100.0 1.1E-40 3.9E-45 322.4 14.6 247 213-464 23-306 (337)
136 4e5w_A Tyrosine-protein kinase 100.0 1.1E-40 3.6E-45 317.7 14.1 243 217-463 20-299 (302)
137 4eut_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 333.4 11.0 242 217-462 8-305 (396)
138 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2E-41 7E-46 340.5 9.5 245 211-463 177-437 (452)
139 3is5_A Calcium-dependent prote 100.0 8.7E-41 3E-45 315.7 13.2 233 217-453 21-273 (285)
140 3lzb_A Epidermal growth factor 100.0 6.3E-41 2.1E-45 322.9 12.3 241 217-464 14-276 (327)
141 2xir_A Vascular endothelial gr 100.0 6.3E-41 2.2E-45 321.3 12.3 252 208-463 17-307 (316)
142 2jii_A Serine/threonine-protei 100.0 1.9E-41 6.6E-46 330.1 8.7 237 217-463 41-333 (352)
143 3mdy_A Bone morphogenetic prot 100.0 5.8E-40 2E-44 317.5 19.1 243 212-464 31-329 (337)
144 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.1E-41 2.4E-45 322.9 12.4 238 214-457 30-316 (329)
145 1mqb_A Ephrin type-A receptor 100.0 1.2E-40 4E-45 321.9 13.9 241 216-462 42-305 (333)
146 1p4o_A Insulin-like growth fac 100.0 2E-41 7E-46 325.7 8.6 250 208-463 15-296 (322)
147 3pfq_A PKC-B, PKC-beta, protei 100.0 6.6E-41 2.3E-45 351.4 13.1 235 214-453 337-587 (674)
148 3pls_A Macrophage-stimulating 100.0 2.1E-40 7.2E-45 315.0 15.4 241 219-464 22-285 (298)
149 2jam_A Calcium/calmodulin-depe 100.0 1.1E-40 3.9E-45 317.9 13.5 233 217-454 8-257 (304)
150 4hgt_A Casein kinase I isoform 100.0 1.8E-40 6.1E-45 315.1 14.8 240 216-462 7-276 (296)
151 3ttj_A Mitogen-activated prote 100.0 6.6E-41 2.3E-45 337.2 12.4 193 217-416 61-266 (464)
152 2vgo_A Serine/threonine-protei 100.0 2.2E-40 7.4E-45 312.8 14.9 232 217-453 13-257 (284)
153 3dbq_A Dual specificity protei 100.0 7E-41 2.4E-45 324.9 11.8 233 216-454 7-269 (343)
154 3uzp_A CKI-delta, CKID, casein 100.0 2.5E-40 8.6E-45 314.1 15.4 239 217-462 8-276 (296)
155 3f66_A Hepatocyte growth facto 100.0 2E-40 7E-45 315.2 14.5 242 217-463 24-288 (298)
156 3rp9_A Mitogen-activated prote 100.0 1.8E-40 6.2E-45 334.7 14.8 187 217-408 52-279 (458)
157 2qr7_A Ribosomal protein S6 ki 100.0 5.1E-41 1.8E-45 325.1 10.3 231 216-454 20-273 (342)
158 3c1x_A Hepatocyte growth facto 100.0 6.3E-41 2.2E-45 328.2 10.8 241 218-464 89-353 (373)
159 1vzo_A Ribosomal protein S6 ki 100.0 8.9E-41 3E-45 325.5 11.8 238 217-458 53-320 (355)
160 2j7t_A Serine/threonine-protei 100.0 1.6E-40 5.6E-45 316.4 13.3 233 216-452 17-269 (302)
161 3com_A Serine/threonine-protei 100.0 5E-40 1.7E-44 314.9 16.5 233 215-453 26-273 (314)
162 3nyv_A Calmodulin-domain prote 100.0 2.1E-40 7E-45 336.6 14.6 234 216-455 24-278 (484)
163 2i1m_A Macrophage colony-stimu 100.0 7.6E-41 2.6E-45 323.3 10.7 247 212-463 40-323 (333)
164 3n9x_A Phosphotransferase; mal 100.0 3.1E-40 1.1E-44 330.1 15.4 193 217-414 25-253 (432)
165 1ua2_A CAK, cell division prot 100.0 1.3E-40 4.4E-45 323.4 12.2 234 215-453 7-286 (346)
166 3brb_A Proto-oncogene tyrosine 100.0 1.3E-40 4.6E-45 318.7 12.1 247 211-463 27-305 (313)
167 1fvr_A Tyrosine-protein kinase 100.0 1.5E-40 5.3E-45 320.3 12.6 242 217-464 24-298 (327)
168 3i6u_A CDS1, serine/threonine- 100.0 1.7E-40 5.6E-45 330.6 12.9 234 215-454 132-395 (419)
169 2w1i_A JAK2; chromosomal rearr 100.0 2E-40 6.7E-45 319.5 13.0 245 216-464 39-320 (326)
170 3nsz_A CK II alpha, casein kin 100.0 7.7E-40 2.6E-44 315.8 17.0 231 217-458 35-318 (330)
171 3pg1_A Mitogen-activated prote 100.0 3.3E-40 1.1E-44 322.6 14.5 242 208-453 12-311 (362)
172 2zmd_A Dual specificity protei 100.0 2.8E-40 9.5E-45 325.9 13.8 231 217-453 55-315 (390)
173 1xbb_A Tyrosine-protein kinase 100.0 7.3E-41 2.5E-45 317.2 9.2 244 212-463 10-276 (291)
174 4aaa_A Cyclin-dependent kinase 100.0 3.4E-40 1.2E-44 318.5 14.0 232 217-453 24-301 (331)
175 3lxp_A Non-receptor tyrosine-p 100.0 2.1E-40 7E-45 318.2 12.4 239 219-463 32-307 (318)
176 3mwu_A Calmodulin-domain prote 100.0 3.9E-40 1.3E-44 334.5 15.1 233 216-454 20-272 (486)
177 3eb0_A Putative uncharacterize 100.0 5.4E-40 1.8E-44 323.5 15.5 233 214-454 3-317 (383)
178 1cm8_A Phosphorylated MAP kina 100.0 3E-40 1E-44 323.1 13.5 232 217-454 24-303 (367)
179 3byv_A Rhoptry kinase; malaria 100.0 1.1E-41 3.9E-46 334.7 3.5 233 217-454 72-355 (377)
180 3lij_A Calcium/calmodulin depe 100.0 3.6E-40 1.2E-44 335.4 14.4 233 217-455 36-288 (494)
181 2h8h_A Proto-oncogene tyrosine 100.0 6.7E-41 2.3E-45 343.3 9.1 246 210-463 259-520 (535)
182 2a19_B Interferon-induced, dou 100.0 1.9E-40 6.4E-45 313.0 11.5 238 216-464 9-272 (284)
183 2rku_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 312.3 14.0 231 217-452 14-259 (294)
184 3q5i_A Protein kinase; CDPK, m 100.0 5.6E-40 1.9E-44 334.8 15.6 235 216-455 34-298 (504)
185 1byg_A CSK, protein (C-termina 100.0 1.4E-40 4.8E-45 313.1 10.1 241 215-464 18-271 (278)
186 2clq_A Mitogen-activated prote 100.0 6E-40 2E-44 311.4 14.4 233 219-454 23-274 (295)
187 2owb_A Serine/threonine-protei 100.0 3.9E-40 1.3E-44 318.5 13.3 231 217-452 40-285 (335)
188 2y7j_A Phosphorylase B kinase 100.0 7.3E-40 2.5E-44 320.2 15.3 238 211-453 87-354 (365)
189 3a7i_A MST3 kinase, serine/thr 100.0 1.2E-39 4.1E-44 310.6 16.3 234 217-458 21-269 (303)
190 3mi9_A Cell division protein k 100.0 1.3E-39 4.6E-44 316.9 16.9 233 217-454 16-307 (351)
191 3lm5_A Serine/threonine-protei 100.0 6.3E-40 2.1E-44 316.0 14.4 239 210-452 20-281 (327)
192 2vwi_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45 317.6 8.4 239 212-453 9-282 (303)
193 1u46_A ACK-1, activated CDC42 100.0 2.3E-40 7.8E-45 313.6 10.5 242 216-463 16-281 (291)
194 3fme_A Dual specificity mitoge 100.0 4.8E-40 1.6E-44 311.2 12.5 234 216-453 5-261 (290)
195 1x8b_A WEE1HU, WEE1-like prote 100.0 3.5E-40 1.2E-44 311.7 11.4 230 217-453 10-274 (289)
196 1t4h_A Serine/threonine-protei 100.0 1.5E-39 5.3E-44 307.9 15.7 234 218-457 26-280 (290)
197 2ycf_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44 313.8 14.8 233 216-454 8-270 (322)
198 2ozo_A Tyrosine-protein kinase 100.0 4.3E-40 1.5E-44 342.1 13.1 238 218-462 335-594 (613)
199 3eqc_A Dual specificity mitoge 100.0 1.8E-40 6.1E-45 324.3 9.6 196 217-416 32-233 (360)
200 2w5a_A Serine/threonine-protei 100.0 1.8E-40 6.3E-45 312.3 9.3 238 217-459 5-267 (279)
201 2h6d_A 5'-AMP-activated protei 100.0 7.7E-40 2.6E-44 307.6 13.2 235 217-458 10-260 (276)
202 3sv0_A Casein kinase I-like; t 100.0 2.2E-39 7.4E-44 326.5 17.2 236 217-459 6-271 (483)
203 2x7f_A TRAF2 and NCK-interacti 100.0 3E-40 1E-44 318.1 10.4 240 209-453 15-281 (326)
204 2yfx_A Tyrosine-protein kinase 100.0 1E-39 3.5E-44 314.6 13.9 243 215-463 27-301 (327)
205 3g2f_A Bone morphogenetic prot 100.0 3.6E-40 1.2E-44 319.0 10.7 240 215-464 10-316 (336)
206 2r3i_A Cell division protein k 100.0 1.1E-39 3.6E-44 310.3 13.7 232 218-454 3-279 (299)
207 3q60_A ROP5B; pseudokinase, tr 100.0 7.6E-41 2.6E-45 328.2 5.7 234 217-454 61-348 (371)
208 2pml_X PFPK7, Ser/Thr protein 100.0 5.9E-40 2E-44 319.0 11.7 231 217-452 30-316 (348)
209 3an0_A Dual specificity mitoge 100.0 9.1E-40 3.1E-44 316.7 12.8 234 215-452 48-304 (340)
210 2i6l_A Mitogen-activated prote 100.0 1.8E-39 6.3E-44 311.5 14.4 233 217-457 10-303 (320)
211 1phk_A Phosphorylase kinase; g 100.0 2.3E-39 7.9E-44 307.8 14.9 233 216-453 15-278 (298)
212 2xrw_A Mitogen-activated prote 100.0 2.3E-39 7.8E-44 317.6 15.2 193 217-416 24-229 (371)
213 3uqc_A Probable conserved tran 100.0 2E-39 6.7E-44 306.2 13.9 218 217-464 30-263 (286)
214 2fst_X Mitogen-activated prote 100.0 9.3E-40 3.2E-44 319.3 11.9 232 217-454 28-307 (367)
215 4e7w_A Glycogen synthase kinas 100.0 2.1E-39 7.1E-44 320.2 14.1 231 217-454 39-317 (394)
216 1wak_A Serine/threonine-protei 100.0 1.9E-39 6.4E-44 321.1 13.5 195 217-416 36-296 (397)
217 3gxj_A TGF-beta receptor type- 100.0 4.4E-41 1.5E-45 320.4 1.6 241 217-464 2-295 (303)
218 1b6c_B TGF-B superfamily recep 100.0 1E-38 3.4E-43 309.5 17.4 249 209-464 33-334 (342)
219 3kvw_A DYRK2, dual specificity 100.0 3.5E-39 1.2E-43 321.9 14.3 195 217-416 96-302 (429)
220 3qyz_A Mitogen-activated prote 100.0 3.3E-39 1.1E-43 315.7 13.9 230 217-453 26-308 (364)
221 1j1b_A Glycogen synthase kinas 100.0 4.3E-39 1.5E-43 320.5 14.8 230 217-455 53-333 (420)
222 1zy4_A Serine/threonine-protei 100.0 5E-39 1.7E-43 306.0 14.0 234 217-458 5-282 (303)
223 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.5E-40 1.2E-44 316.6 5.8 248 209-464 24-300 (319)
224 1blx_A Cyclin-dependent kinase 100.0 5.5E-39 1.9E-43 309.3 13.7 234 216-454 9-292 (326)
225 2wtk_C Serine/threonine-protei 100.0 8E-39 2.7E-43 305.2 14.5 236 217-458 4-262 (305)
226 4fl3_A Tyrosine-protein kinase 100.0 2.6E-39 8.8E-44 337.1 11.7 231 224-462 375-627 (635)
227 2wei_A Calmodulin-domain prote 100.0 1E-38 3.4E-43 301.8 14.5 237 215-458 19-275 (287)
228 4exu_A Mitogen-activated prote 100.0 4.8E-39 1.6E-43 315.2 12.3 231 217-454 41-319 (371)
229 2j0j_A Focal adhesion kinase 1 100.0 7.7E-39 2.6E-43 334.8 14.6 245 212-463 384-648 (656)
230 3cek_A Dual specificity protei 100.0 1.3E-39 4.3E-44 312.0 7.9 244 208-458 18-291 (313)
231 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-38 3.8E-43 310.6 14.3 231 217-453 10-300 (353)
232 3rgf_A Cyclin-dependent kinase 100.0 4.5E-39 1.6E-43 319.3 10.8 192 218-415 20-238 (405)
233 3e3p_A Protein kinase, putativ 100.0 3.3E-38 1.1E-42 308.1 16.0 239 211-453 16-309 (360)
234 2vx3_A Dual specificity tyrosi 100.0 2.4E-38 8.1E-43 311.6 15.1 198 216-416 52-261 (382)
235 2pzi_A Probable serine/threoni 100.0 4.2E-39 1.4E-43 339.7 10.1 238 217-463 79-325 (681)
236 1z57_A Dual specificity protei 100.0 2.4E-38 8.2E-43 306.2 14.0 195 217-416 13-237 (339)
237 3coi_A Mitogen-activated prote 100.0 1.5E-38 5E-43 309.8 12.1 231 217-454 23-301 (353)
238 3fhr_A MAP kinase-activated pr 100.0 1.9E-38 6.5E-43 306.7 12.8 232 216-454 26-283 (336)
239 3aln_A Dual specificity mitoge 100.0 1.2E-38 4.1E-43 307.1 11.1 234 216-453 20-280 (327)
240 2dyl_A Dual specificity mitoge 100.0 3E-38 1E-42 302.9 12.9 233 217-453 24-278 (318)
241 2eu9_A Dual specificity protei 100.0 4.4E-38 1.5E-42 306.4 14.1 195 217-416 18-242 (355)
242 3a99_A Proto-oncogene serine/t 100.0 3.2E-39 1.1E-43 310.1 5.9 241 212-458 37-292 (320)
243 2iwi_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 308.7 4.4 241 212-458 25-282 (312)
244 3m2w_A MAP kinase-activated pr 100.0 9.5E-38 3.3E-42 296.9 14.0 215 218-458 17-255 (299)
245 1q8y_A SR protein kinase; tran 100.0 2.4E-38 8.2E-43 310.6 10.0 195 217-416 18-238 (373)
246 3qa8_A MGC80376 protein; kinas 100.0 1.4E-38 4.9E-43 327.5 8.4 245 217-464 13-310 (676)
247 2rio_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 315.0 11.1 229 218-453 15-290 (434)
248 3p23_A Serine/threonine-protei 100.0 4E-38 1.4E-42 314.1 9.3 234 214-458 20-282 (432)
249 2vuw_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43 306.4 2.0 226 215-446 17-323 (336)
250 3dzo_A Rhoptry kinase domain; 100.0 1E-36 3.5E-41 302.7 10.5 232 217-453 77-358 (413)
251 4azs_A Methyltransferase WBDD; 100.0 3.3E-31 1.1E-35 272.1 7.2 181 225-413 241-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 2.6E-27 8.7E-32 241.9 9.6 180 220-414 338-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2.3E-25 7.9E-30 208.9 9.0 165 210-398 82-274 (282)
254 2v9t_B SLIT homolog 2 protein 99.9 9.5E-22 3.3E-26 177.6 13.6 133 2-134 37-169 (220)
255 2v70_A SLIT-2, SLIT homolog 2 99.9 1E-21 3.4E-26 177.4 12.2 133 2-134 37-170 (220)
256 3e6j_A Variable lymphocyte rec 99.8 7E-21 2.4E-25 173.0 13.7 132 2-134 45-176 (229)
257 1zth_A RIO1 serine protein kin 99.8 1.1E-21 3.7E-26 181.7 7.2 140 219-370 48-221 (258)
258 3m19_A Variable lymphocyte rec 99.8 2E-20 6.7E-25 172.7 14.6 135 1-135 39-173 (251)
259 2o6s_A Variable lymphocyte rec 99.8 2.8E-20 9.5E-25 166.5 14.4 135 1-135 32-166 (208)
260 3m19_A Variable lymphocyte rec 99.8 3.8E-20 1.3E-24 170.7 14.3 130 2-131 64-193 (251)
261 1w8a_A SLIT protein; signaling 99.8 2.4E-20 8.3E-25 164.6 12.0 131 1-134 12-143 (192)
262 3rfs_A Internalin B, repeat mo 99.8 5.3E-20 1.8E-24 171.8 14.4 131 2-134 68-198 (272)
263 2wfh_A SLIT homolog 2 protein 99.8 8.8E-20 3E-24 161.1 12.7 129 2-134 15-143 (193)
264 2o6q_A Variable lymphocyte rec 99.8 3E-19 1E-23 166.5 14.4 134 1-134 65-198 (270)
265 3rgz_A Protein brassinosteroid 99.8 5.8E-20 2E-24 196.4 10.3 91 45-135 632-722 (768)
266 2o6r_A Variable lymphocyte rec 99.8 6.6E-19 2.3E-23 153.3 13.4 130 2-134 12-141 (177)
267 1ozn_A Reticulon 4 receptor; N 99.8 2.5E-19 8.5E-24 168.5 11.1 134 1-134 84-218 (285)
268 3v47_A TOLL-like receptor 5B a 99.8 2.5E-19 8.6E-24 179.9 11.3 134 2-135 280-413 (455)
269 2o6q_A Variable lymphocyte rec 99.8 1.1E-18 3.7E-23 162.8 14.5 135 1-135 41-175 (270)
270 1ogq_A PGIP-2, polygalacturona 99.8 6.9E-20 2.4E-24 174.7 6.4 135 2-136 55-193 (313)
271 4g8a_A TOLL-like receptor 4; l 99.8 3E-19 1E-23 186.7 11.4 135 1-135 56-191 (635)
272 2xot_A Amphoterin-induced prot 99.8 6.1E-19 2.1E-23 171.6 11.9 130 2-131 44-177 (361)
273 1ogq_A PGIP-2, polygalacturona 99.8 1E-19 3.5E-24 173.5 6.3 133 2-135 81-215 (313)
274 2v9t_B SLIT homolog 2 protein 99.8 1.4E-18 4.7E-23 156.8 13.2 131 2-135 16-146 (220)
275 1p9a_G Platelet glycoprotein I 99.8 1.6E-18 5.5E-23 163.2 14.0 128 1-131 59-186 (290)
276 3rfs_A Internalin B, repeat mo 99.8 1.9E-18 6.3E-23 161.3 14.0 133 2-134 90-222 (272)
277 1ozn_A Reticulon 4 receptor; N 99.8 2.1E-18 7.1E-23 162.2 13.8 133 2-134 37-170 (285)
278 2z66_A Variable lymphocyte rec 99.8 1E-18 3.5E-23 166.1 11.3 136 1-136 105-242 (306)
279 4gyi_A RIO2 kinase; protein ki 99.8 6E-20 2.1E-24 176.6 2.5 139 218-370 95-267 (397)
280 2xot_A Amphoterin-induced prot 99.8 7.3E-19 2.5E-23 171.0 9.7 134 1-134 68-206 (361)
281 2z62_A TOLL-like receptor 4, v 99.8 1.9E-18 6.7E-23 161.6 12.1 133 1-133 32-165 (276)
282 2v70_A SLIT-2, SLIT homolog 2 99.8 4.4E-18 1.5E-22 153.5 13.3 133 1-136 15-148 (220)
283 1p9a_G Platelet glycoprotein I 99.8 4.5E-18 1.5E-22 160.1 13.8 131 1-134 35-165 (290)
284 3rgz_A Protein brassinosteroid 99.8 1.2E-18 4.1E-23 186.2 10.7 134 2-135 399-532 (768)
285 2ell_A Acidic leucine-rich nuc 99.8 1.1E-18 3.8E-23 150.5 8.6 129 1-131 28-161 (168)
286 3e6j_A Variable lymphocyte rec 99.8 8.8E-18 3E-22 152.5 14.4 129 2-134 24-152 (229)
287 4fcg_A Uncharacterized protein 99.8 1.5E-18 5E-23 166.5 9.1 133 1-136 131-272 (328)
288 2o6s_A Variable lymphocyte rec 99.8 6.1E-18 2.1E-22 151.2 12.6 131 1-138 56-186 (208)
289 2z66_A Variable lymphocyte rec 99.7 4.1E-18 1.4E-22 161.8 10.9 133 1-134 82-216 (306)
290 2je0_A Acidic leucine-rich nuc 99.7 1.5E-18 5.2E-23 146.5 7.0 122 2-125 22-148 (149)
291 3vq2_A TLR4, TOLL-like recepto 99.7 7.8E-18 2.7E-22 175.3 13.4 135 1-135 36-171 (606)
292 4g8a_A TOLL-like receptor 4; l 99.7 7.1E-18 2.4E-22 176.3 12.1 133 2-134 450-584 (635)
293 1w8a_A SLIT protein; signaling 99.7 7.6E-18 2.6E-22 148.5 10.2 134 1-135 33-167 (192)
294 2z62_A TOLL-like receptor 4, v 99.7 1E-17 3.5E-22 156.6 11.5 134 1-134 56-194 (276)
295 2id5_A Lingo-1, leucine rich r 99.7 8.5E-18 2.9E-22 169.9 11.6 133 1-133 36-168 (477)
296 2xwt_C Thyrotropin receptor; s 99.7 5.9E-18 2E-22 154.7 7.7 131 1-134 35-172 (239)
297 3v47_A TOLL-like receptor 5B a 99.7 1.5E-17 5.2E-22 166.9 11.0 136 1-136 34-173 (455)
298 4fcg_A Uncharacterized protein 99.7 1.9E-17 6.5E-22 158.7 10.9 135 1-137 154-297 (328)
299 3vq2_A TLR4, TOLL-like recepto 99.7 1.6E-17 5.4E-22 173.0 10.8 130 2-131 404-535 (606)
300 3zyi_A Leucine-rich repeat-con 99.7 2.2E-17 7.5E-22 165.6 11.4 132 1-132 79-211 (452)
301 3zyj_A Leucine-rich repeat-con 99.7 2.9E-17 1E-21 164.1 12.0 131 2-134 141-272 (440)
302 2z80_A TOLL-like receptor 2, v 99.7 1.6E-17 5.4E-22 161.1 9.6 134 2-135 57-192 (353)
303 3t6q_A CD180 antigen; protein- 99.7 2E-17 7E-22 172.2 10.9 134 1-134 37-170 (606)
304 2z63_A TOLL-like receptor 4, v 99.7 2.2E-17 7.4E-22 170.6 10.8 130 2-132 378-509 (570)
305 3g39_A Variable lymphocyte rec 99.7 6.5E-17 2.2E-21 139.6 11.8 107 24-133 12-118 (170)
306 2z63_A TOLL-like receptor 4, v 99.7 4E-17 1.4E-21 168.6 12.1 134 1-134 32-166 (570)
307 3oja_B Anopheles plasmodium-re 99.7 3.6E-17 1.2E-21 169.8 11.1 132 2-133 56-187 (597)
308 1ziw_A TOLL-like receptor 3; i 99.7 3.3E-17 1.1E-21 173.0 11.0 134 1-134 29-162 (680)
309 4ezg_A Putative uncharacterize 99.7 2.5E-17 8.5E-22 145.9 8.4 125 1-131 48-173 (197)
310 2id5_A Lingo-1, leucine rich r 99.7 3.1E-17 1.1E-21 165.7 10.2 134 1-134 60-193 (477)
311 3zyj_A Leucine-rich repeat-con 99.7 5.6E-17 1.9E-21 162.1 11.7 130 2-131 69-199 (440)
312 3zyi_A Leucine-rich repeat-con 99.7 4.8E-17 1.6E-21 163.2 11.3 132 1-134 151-283 (452)
313 3t6q_A CD180 antigen; protein- 99.7 3.2E-17 1.1E-21 170.7 10.3 132 2-134 405-540 (606)
314 3o6n_A APL1; leucine-rich repe 99.7 4.6E-17 1.6E-21 160.1 10.7 131 2-132 50-180 (390)
315 4eco_A Uncharacterized protein 99.7 1.3E-17 4.5E-22 174.3 7.2 98 37-135 198-322 (636)
316 2z81_A CD282 antigen, TOLL-lik 99.7 2.9E-17 9.9E-22 168.9 9.5 136 1-136 30-167 (549)
317 1wwl_A Monocyte differentiatio 99.7 9.2E-18 3.1E-22 159.9 4.8 132 2-134 100-245 (312)
318 2r9u_A Variable lymphocyte rec 99.7 1.7E-16 5.9E-21 137.3 12.0 107 24-133 15-121 (174)
319 3j0a_A TOLL-like receptor 5; m 99.7 8.4E-17 2.9E-21 173.7 11.8 134 1-134 28-165 (844)
320 1ziw_A TOLL-like receptor 3; i 99.7 1.2E-16 4E-21 168.7 12.4 133 2-134 485-626 (680)
321 2o6r_A Variable lymphocyte rec 99.7 2.2E-16 7.7E-21 137.2 11.9 110 1-110 32-141 (177)
322 4ezg_A Putative uncharacterize 99.7 8.3E-17 2.8E-21 142.5 9.1 123 2-130 71-194 (197)
323 2z80_A TOLL-like receptor 2, v 99.7 4E-17 1.4E-21 158.3 7.6 130 1-130 80-211 (353)
324 4ecn_A Leucine-rich repeat pro 99.7 2.1E-17 7.2E-22 176.6 6.1 133 2-135 328-565 (876)
325 4eco_A Uncharacterized protein 99.7 2.6E-17 8.8E-22 172.1 5.1 127 6-134 192-347 (636)
326 1a9n_A U2A', U2A'; complex (nu 99.7 6.7E-17 2.3E-21 140.4 6.9 122 2-129 24-152 (176)
327 3g39_A Variable lymphocyte rec 99.7 6E-16 2E-20 133.5 12.7 107 1-110 13-119 (170)
328 3oja_B Anopheles plasmodium-re 99.7 3.4E-16 1.2E-20 162.5 13.1 128 1-131 79-206 (597)
329 1xku_A Decorin; proteoglycan, 99.7 4.2E-16 1.4E-20 149.6 12.8 127 2-131 57-185 (330)
330 2ft3_A Biglycan; proteoglycan, 99.7 3.1E-16 1.1E-20 150.6 11.7 129 2-131 128-278 (332)
331 4b8c_D Glucose-repressible alc 99.7 7.4E-17 2.5E-21 170.5 7.8 119 12-134 215-333 (727)
332 2ft3_A Biglycan; proteoglycan, 99.7 6.3E-16 2.1E-20 148.5 13.6 126 2-131 59-186 (332)
333 3o6n_A APL1; leucine-rich repe 99.7 5.1E-16 1.7E-20 152.6 13.1 128 1-131 73-200 (390)
334 2wfh_A SLIT homolog 2 protein 99.7 3.7E-16 1.3E-20 137.7 10.9 107 1-108 35-141 (193)
335 2je0_A Acidic leucine-rich nuc 99.7 2.1E-16 7.3E-21 133.2 8.8 114 19-134 15-130 (149)
336 2xwt_C Thyrotropin receptor; s 99.7 9E-17 3.1E-21 146.9 6.9 129 1-132 59-195 (239)
337 1wwl_A Monocyte differentiatio 99.6 3.4E-17 1.1E-21 156.0 3.6 132 2-135 126-270 (312)
338 2r9u_A Variable lymphocyte rec 99.6 1.1E-15 3.9E-20 132.2 12.5 105 2-109 17-121 (174)
339 2ell_A Acidic leucine-rich nuc 99.6 5.2E-16 1.8E-20 133.6 10.1 114 19-134 22-137 (168)
340 3oja_A Leucine-rich immune mol 99.6 1.1E-16 3.9E-21 161.6 6.8 124 2-131 104-228 (487)
341 4b8c_D Glucose-repressible alc 99.6 1.3E-16 4.4E-21 168.7 6.4 133 1-137 228-361 (727)
342 2z7x_B TOLL-like receptor 1, v 99.6 2.7E-16 9.2E-21 160.6 8.5 128 1-131 328-458 (520)
343 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 4.3E-16 1.5E-20 160.7 10.1 128 1-131 357-487 (562)
344 1xku_A Decorin; proteoglycan, 99.6 8.1E-16 2.8E-20 147.6 11.3 126 2-130 126-253 (330)
345 1h6t_A Internalin B; cell adhe 99.6 7.6E-16 2.6E-20 145.0 10.8 122 2-133 51-172 (291)
346 3o53_A Protein LRIM1, AGAP0063 99.6 2E-16 6.9E-21 150.9 6.9 124 2-131 104-228 (317)
347 4glp_A Monocyte differentiatio 99.6 2E-16 6.7E-21 150.5 6.7 128 2-130 122-264 (310)
348 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 7.2E-16 2.5E-20 159.0 11.4 124 2-131 36-160 (562)
349 1dce_A Protein (RAB geranylger 99.6 5.9E-16 2E-20 158.8 10.4 122 3-135 429-551 (567)
350 4glp_A Monocyte differentiatio 99.6 2.1E-16 7.3E-21 150.3 6.3 135 1-136 95-243 (310)
351 1dce_A Protein (RAB geranylger 99.6 2.4E-16 8.1E-21 161.7 7.1 118 2-124 446-567 (567)
352 1h6u_A Internalin H; cell adhe 99.6 1.2E-15 4.1E-20 144.8 11.1 120 2-131 46-165 (308)
353 2z7x_B TOLL-like receptor 1, v 99.6 4.7E-16 1.6E-20 158.8 8.9 124 2-131 5-129 (520)
354 1h6u_A Internalin H; cell adhe 99.6 8.1E-16 2.8E-20 146.0 9.8 123 1-133 89-211 (308)
355 3j0a_A TOLL-like receptor 5; m 99.6 1.1E-15 3.9E-20 164.9 12.1 135 1-135 52-192 (844)
356 1xeu_A Internalin C; cellular 99.6 1.3E-15 4.4E-20 141.2 10.3 120 2-132 46-165 (263)
357 4ecn_A Leucine-rich repeat pro 99.6 1.7E-16 5.8E-21 169.6 4.9 131 1-135 452-612 (876)
358 3oja_A Leucine-rich immune mol 99.6 3.8E-16 1.3E-20 157.9 6.8 125 2-130 125-250 (487)
359 2z81_A CD282 antigen, TOLL-lik 99.6 4.4E-16 1.5E-20 160.1 7.4 130 1-130 54-185 (549)
360 1xeu_A Internalin C; cellular 99.6 3.2E-15 1.1E-19 138.5 11.7 118 3-131 25-142 (263)
361 1h6t_A Internalin B; cell adhe 99.6 1.8E-15 6.1E-20 142.4 10.1 121 1-131 72-192 (291)
362 2ifg_A High affinity nerve gro 99.6 4E-15 1.4E-19 143.8 12.0 131 2-135 13-146 (347)
363 1m9s_A Internalin B; cell inva 99.6 4.3E-15 1.5E-19 153.4 11.4 120 2-131 48-167 (605)
364 4fmz_A Internalin; leucine ric 99.6 2.3E-15 8E-20 145.4 8.9 125 2-134 204-328 (347)
365 1ds9_A Outer arm dynein; leuci 99.6 6.8E-18 2.3E-22 149.7 -8.6 129 2-135 23-158 (198)
366 1m9s_A Internalin B; cell inva 99.6 9.1E-15 3.1E-19 150.9 12.5 120 2-131 70-189 (605)
367 1a9n_A U2A', U2A'; complex (nu 99.6 5.3E-15 1.8E-19 128.3 8.8 113 14-131 12-127 (176)
368 3o53_A Protein LRIM1, AGAP0063 99.6 2.2E-15 7.7E-20 143.6 6.8 126 2-131 125-251 (317)
369 2ifg_A High affinity nerve gro 99.5 7.7E-15 2.6E-19 141.8 9.1 108 24-134 11-120 (347)
370 4fmz_A Internalin; leucine ric 99.5 1.2E-14 3.9E-19 140.5 10.2 123 2-134 182-304 (347)
371 1o6v_A Internalin A; bacterial 99.5 1.7E-14 5.9E-19 145.1 10.7 123 2-134 248-370 (466)
372 1o6v_A Internalin A; bacterial 99.5 2.1E-14 7.2E-19 144.5 10.8 121 2-132 226-346 (466)
373 3cvr_A Invasion plasmid antige 99.5 1.5E-14 5.2E-19 147.7 9.7 89 2-106 105-193 (571)
374 3tm0_A Aminoglycoside 3'-phosp 99.5 1E-13 3.6E-18 128.3 12.0 145 215-366 11-212 (263)
375 3cvr_A Invasion plasmid antige 99.5 1.3E-13 4.5E-18 140.8 12.6 111 2-131 64-174 (571)
376 4ay9_X Follicle-stimulating ho 99.5 4.2E-14 1.5E-18 136.7 8.5 121 3-126 15-137 (350)
377 1ds9_A Outer arm dynein; leuci 99.5 3.5E-16 1.2E-20 138.6 -8.1 124 1-131 52-186 (198)
378 3bz5_A Internalin-J, INLJ; leu 99.4 1.9E-13 6.4E-18 136.9 10.5 122 2-134 153-281 (457)
379 3bz5_A Internalin-J, INLJ; leu 99.4 6.4E-13 2.2E-17 133.0 13.9 119 2-132 111-248 (457)
380 3goz_A Leucine-rich repeat-con 99.4 9.2E-15 3.2E-19 142.1 -1.0 130 2-131 3-152 (362)
381 2ca6_A RAN GTPase-activating p 99.4 4.5E-15 1.5E-19 145.6 -3.6 130 2-131 127-288 (386)
382 3goz_A Leucine-rich repeat-con 99.4 1.4E-14 4.6E-19 140.9 -1.3 133 1-133 26-183 (362)
383 1jl5_A Outer protein YOPM; leu 99.4 1.3E-12 4.4E-17 130.6 13.0 78 21-106 131-208 (454)
384 3g06_A SSPH2 (leucine-rich rep 99.4 8.7E-13 3E-17 136.3 11.1 81 45-134 221-301 (622)
385 2ast_B S-phase kinase-associat 99.4 2.4E-14 8.2E-19 137.5 -0.6 125 2-127 75-205 (336)
386 2ast_B S-phase kinase-associat 99.4 6.8E-15 2.3E-19 141.4 -4.7 131 2-132 98-238 (336)
387 2ca6_A RAN GTPase-activating p 99.4 8.7E-15 3E-19 143.6 -5.3 129 2-130 65-229 (386)
388 1jl5_A Outer protein YOPM; leu 99.4 1.6E-12 5.4E-17 130.0 10.7 54 70-131 318-371 (454)
389 1nd4_A Aminoglycoside 3'-phosp 99.4 1.4E-12 4.9E-17 120.3 9.4 136 219-366 21-213 (264)
390 4ay9_X Follicle-stimulating ho 99.4 7.1E-13 2.4E-17 128.1 7.3 132 2-134 59-219 (350)
391 3g06_A SSPH2 (leucine-rich rep 99.3 9.1E-12 3.1E-16 128.7 12.4 14 93-106 141-154 (622)
392 3dxp_A Putative acyl-COA dehyd 99.2 3E-11 1E-15 117.1 11.4 141 223-367 43-248 (359)
393 1z7x_W Ribonuclease inhibitor; 99.2 7.2E-14 2.5E-18 140.3 -7.6 130 2-131 232-384 (461)
394 3sb4_A Hypothetical leucine ri 99.2 3.8E-11 1.3E-15 114.8 10.4 127 2-131 106-311 (329)
395 1z7x_W Ribonuclease inhibitor; 99.1 9.7E-13 3.3E-17 132.0 -5.0 130 2-131 61-213 (461)
396 3sg8_A APH(2'')-ID; antibiotic 99.1 4.6E-11 1.6E-15 112.9 5.6 184 223-415 25-289 (304)
397 3un9_A NLR family member X1; l 99.1 1.4E-12 4.7E-17 126.7 -6.0 129 2-130 77-224 (372)
398 3sb4_A Hypothetical leucine ri 99.1 1.8E-10 6.3E-15 110.1 8.8 103 20-124 225-328 (329)
399 3un9_A NLR family member X1; l 99.0 2.8E-12 9.6E-17 124.6 -6.6 130 2-131 106-253 (372)
400 3r70_A Aminoglycoside phosphot 98.8 1.5E-08 5E-13 96.4 11.5 138 219-369 38-239 (320)
401 3rw6_A Nuclear RNA export fact 98.8 1.5E-10 5E-15 106.1 -3.6 105 17-123 137-257 (267)
402 3rw6_A Nuclear RNA export fact 98.8 7.3E-10 2.5E-14 101.4 0.6 96 2-99 148-257 (267)
403 3ogk_B Coronatine-insensitive 98.8 8.8E-11 3E-15 121.5 -6.7 129 3-131 384-527 (592)
404 1io0_A Tropomodulin; LRR prote 98.7 5.6E-10 1.9E-14 97.1 -2.3 116 15-130 30-164 (185)
405 3ogk_B Coronatine-insensitive 98.7 1.8E-09 6.1E-14 111.7 0.6 112 19-131 162-307 (592)
406 4gkh_A Aminoglycoside 3'-phosp 98.7 1.8E-07 6.1E-12 86.5 12.8 134 225-366 31-222 (272)
407 3tdw_A Gentamicin resistance p 98.7 1.3E-07 4.5E-12 89.1 12.0 136 223-367 24-224 (306)
408 3d1u_A Putative fructosamine-3 98.7 1.3E-07 4.6E-12 88.0 11.8 76 222-301 19-97 (288)
409 4fdw_A Leucine rich hypothetic 98.7 4.6E-08 1.6E-12 95.7 8.8 124 2-131 231-359 (401)
410 4fdw_A Leucine rich hypothetic 98.6 1.1E-07 3.6E-12 93.2 10.9 121 2-127 208-333 (401)
411 3ats_A Putative uncharacterize 98.5 1.5E-07 5E-12 90.8 8.8 81 223-303 25-122 (357)
412 3ovc_A Hygromycin-B 4-O-kinase 98.5 2E-07 6.7E-12 90.0 8.6 75 222-302 45-122 (362)
413 2p1m_B Transport inhibitor res 98.5 3.1E-09 1.1E-13 109.9 -5.8 124 6-130 356-494 (594)
414 1io0_A Tropomodulin; LRR prote 98.5 6.1E-09 2.1E-13 90.5 -3.1 106 1-106 40-164 (185)
415 2ra8_A Uncharacterized protein 98.4 5.7E-08 1.9E-12 93.5 1.2 115 14-131 165-293 (362)
416 2p1m_B Transport inhibitor res 98.3 2.1E-08 7.1E-13 103.7 -3.2 110 18-127 102-221 (594)
417 2olc_A MTR kinase, methylthior 98.3 3.5E-06 1.2E-10 82.4 11.3 75 223-299 35-120 (397)
418 2q83_A YTAA protein; 2635576, 98.2 3.7E-06 1.3E-10 80.3 9.9 139 224-367 38-252 (346)
419 4gt6_A Cell surface protein; l 98.2 5.3E-06 1.8E-10 81.0 10.0 120 7-130 251-370 (394)
420 4h09_A Hypothetical leucine ri 98.1 1.1E-05 3.9E-10 78.1 9.8 116 9-127 228-343 (379)
421 2ra8_A Uncharacterized protein 98.1 1.1E-06 3.9E-11 84.4 2.3 114 15-131 133-266 (362)
422 3jr1_A Putative fructosamine-3 98.0 3.7E-05 1.3E-09 72.2 11.9 136 223-363 41-232 (312)
423 4gt6_A Cell surface protein; l 98.0 1.4E-05 4.9E-10 77.9 8.3 116 8-129 275-390 (394)
424 3e4g_A ATP synthase subunit S, 97.9 1.4E-06 4.8E-11 73.9 0.1 82 22-103 62-149 (176)
425 3f7w_A Putative fructosamine-3 97.9 6.6E-05 2.2E-09 69.8 10.5 79 219-301 16-97 (288)
426 3e4g_A ATP synthase subunit S, 97.8 2.7E-06 9.2E-11 72.2 0.5 92 37-128 53-150 (176)
427 4fs7_A Uncharacterized protein 97.8 5.4E-05 1.8E-09 73.8 9.2 113 10-126 242-375 (394)
428 4fs7_A Uncharacterized protein 97.8 4.5E-05 1.5E-09 74.4 7.8 117 8-127 58-195 (394)
429 3dxq_A Choline/ethanolamine ki 97.8 8.9E-05 3E-09 69.3 9.5 129 223-368 23-203 (301)
430 2ppq_A HSK, HK, homoserine kin 97.8 8.9E-05 3E-09 70.0 9.6 157 208-367 7-217 (322)
431 2pyw_A Uncharacterized protein 97.8 0.00011 3.7E-09 72.3 10.5 74 336-410 231-313 (420)
432 4h09_A Hypothetical leucine ri 97.7 6.9E-05 2.4E-09 72.6 8.9 107 8-117 250-356 (379)
433 3rfe_A Platelet glycoprotein I 97.7 4.8E-05 1.6E-09 61.4 6.2 39 94-132 32-70 (130)
434 3feg_A Choline/ethanolamine ki 97.6 0.00019 6.5E-09 69.2 10.2 139 224-367 56-254 (379)
435 3csv_A Aminoglycoside phosphot 97.6 0.00044 1.5E-08 65.5 12.0 141 224-369 24-219 (333)
436 1pgv_A TMD-1, tropomodulin TMD 97.6 5.8E-06 2E-10 71.5 -1.2 112 17-128 37-168 (197)
437 1nw1_A Choline kinase (49.2 KD 97.6 0.00021 7E-09 70.4 9.6 73 223-301 78-159 (429)
438 3rfe_A Platelet glycoprotein I 97.6 0.00017 5.8E-09 58.1 7.1 56 49-106 12-68 (130)
439 2qg7_A Ethanolamine kinase PV0 97.5 0.00032 1.1E-08 69.4 10.3 74 223-301 113-188 (458)
440 1zyl_A Hypothetical protein YI 97.5 0.0005 1.7E-08 64.9 11.3 156 208-367 11-223 (328)
441 3c5i_A Choline kinase; choline 97.4 0.00041 1.4E-08 66.8 8.5 73 224-301 39-121 (369)
442 3i1a_A Spectinomycin phosphotr 97.2 0.0016 5.5E-08 61.8 10.7 33 336-368 205-237 (339)
443 1pgv_A TMD-1, tropomodulin TMD 97.2 2.5E-05 8.6E-10 67.5 -1.8 105 2-106 46-170 (197)
444 3f2s_A CK, chetk-alpha, cholin 97.1 0.0018 6.3E-08 62.6 9.5 139 224-366 58-279 (401)
445 3mes_A Choline kinase; malaria 96.8 0.0038 1.3E-07 60.9 8.8 73 224-301 76-157 (424)
446 2yle_A Protein spire homolog 1 96.6 0.0029 1E-07 54.9 6.2 106 299-415 33-138 (229)
447 3g15_A CK, chetk-alpha, cholin 95.4 0.048 1.6E-06 52.8 9.0 30 338-367 245-280 (401)
448 4ann_A ESSB; membrane protein, 92.6 0.23 8E-06 43.0 6.5 120 272-419 43-163 (215)
449 4ano_A ESSB; membrane protein, 90.2 0.81 2.8E-05 39.7 7.5 116 272-416 48-165 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 82.1 0.15 5.1E-06 50.4 -1.9 61 221-284 145-214 (463)
451 2lz0_A Uncharacterized protein 80.6 3.7 0.00013 30.6 5.9 46 8-54 7-52 (100)
452 2lz0_A Uncharacterized protein 76.2 8.3 0.00028 28.7 6.7 46 32-78 7-52 (100)
453 1cja_A Protein (actin-fragmin 41.3 67 0.0023 29.6 7.1 141 220-369 71-239 (342)
454 3eps_A Isocitrate dehydrogenas 38.3 1.4E+02 0.0049 29.4 9.1 140 225-373 313-487 (578)
455 2x6h_A GH13170P, VPS34, phosph 32.9 23 0.00079 36.3 2.9 25 342-366 551-575 (696)
456 3ls8_A Phosphatidylinositol 3- 22.9 46 0.0016 33.6 3.0 46 314-366 454-501 (614)
457 2y3a_A Phosphatidylinositol-4, 22.1 46 0.0016 36.2 2.9 25 342-366 940-964 (1092)
458 2wxf_A Phosphatidylinositol-4, 20.1 39 0.0013 36.1 1.9 25 342-366 788-812 (940)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=7e-54 Score=410.33 Aligned_cols=236 Identities=23% Similarity=0.324 Sum_probs=197.2
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
++|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|++++++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999986 49999999997653 2345678999999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC-
Q 041491 295 YMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE- 372 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~- 372 (467)
||+||+|.+++...+ ..+++.+++.++.||+.||+||| ++||+||||||+|||++++|.+||+|||+|+......
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 999999999997554 46799999999999999999999 9999999999999999999999999999999876432
Q ss_pred ----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhh-------hccccccccccc
Q 041491 373 ----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVND-------FLPISVMNVVDT 441 (467)
Q Consensus 373 ----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~ 441 (467)
..+|..|+|||.+.+..|+.++||||+||++|||+||+.||.+....+. +...... .+++++.++|.+
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~~~i~~~~~~~~~~~~s~~~~~li~~ 259 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL-VLKIISGSFPPVSLHYSYDLRSLVSQ 259 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHcCCCCCCCccCCHHHHHHHHH
Confidence 2478899999999999999999999999999999999999986433221 2222222 234568999999
Q ss_pred ccccchhHHHHHHHHHH
Q 041491 442 SLLRREDKYFAAKKQCV 458 (467)
Q Consensus 442 ~l~~~~~~r~~~~~~~~ 458 (467)
||.+||.+|++ +.|++
T Consensus 260 ~L~~dP~~R~s-~~e~l 275 (350)
T 4b9d_A 260 LFKRNPRDRPS-VNSIL 275 (350)
T ss_dssp HTCSSGGGSCC-HHHHH
T ss_pred HccCChhHCcC-HHHHh
Confidence 99999999974 44544
No 2
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.2e-53 Score=406.21 Aligned_cols=233 Identities=23% Similarity=0.282 Sum_probs=202.6
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEecc
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYM 296 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 296 (467)
+.|++.++||+|+||+||+|+++ +|+.||||+++.......+.+.+|++++++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56999999999999999999986 59999999998766666678899999999999999999999999999999999999
Q ss_pred cCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC-----
Q 041491 297 ANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK----- 371 (467)
Q Consensus 297 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----- 371 (467)
+||+|.+++.. +.+++.++..++.||+.||+||| ++||+||||||+|||++.+|.+||+|||+|+.+...
T Consensus 154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 99999999865 45899999999999999999999 999999999999999999999999999999987543
Q ss_pred CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh---------hhcccccccccccc
Q 041491 372 ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN---------DFLPISVMNVVDTS 442 (467)
Q Consensus 372 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~~ 442 (467)
...+|..|+|||.+.+..|+.++||||+||++|||++|+.||.+....+ .+..... ..+++++.++|.+|
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i~~~~~~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSSCCCCSCGGGSCHHHHHHHHHH
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCCCCCCccccCCHHHHHHHHHH
Confidence 2357888999999999999999999999999999999999997643221 1111111 23455688999999
Q ss_pred cccchhHHHHHHHHH
Q 041491 443 LLRREDKYFAAKKQC 457 (467)
Q Consensus 443 l~~~~~~r~~~~~~~ 457 (467)
|.+||++|++ +.|+
T Consensus 308 L~~dP~~R~t-a~e~ 321 (346)
T 4fih_A 308 LVRDPAQRAT-AAEL 321 (346)
T ss_dssp SCSSTTTSCC-HHHH
T ss_pred cCCChhHCcC-HHHH
Confidence 9999999985 4444
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7.5e-54 Score=404.43 Aligned_cols=239 Identities=26% Similarity=0.385 Sum_probs=201.2
Q ss_pred hccCccCCccCcccceeEEEEEec------CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
.++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 467889999999999999999874 36789999998766666788999999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEE
Q 041491 291 LVLEYMANGSLEKCLYSS------------NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAH 358 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~k 358 (467)
||||||++|+|.++++.. ...+++.++..++.|+++||+||| +++|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEE
Confidence 999999999999999653 236899999999999999999999 99999999999999999999999
Q ss_pred EeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--
Q 041491 359 LSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN-- 428 (467)
Q Consensus 359 l~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~-- 428 (467)
|+|||+|+...... ..++..|+|||++.++.|+.++|||||||++|||+| |+.||.+....+ +...+.
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~i~~~ 246 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECITQG 246 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHHT
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHcC
Confidence 99999998664322 235677999999999999999999999999999999 899998754332 222221
Q ss_pred ------hhcccccccccccccccchhHHHHHHHHHHHHH
Q 041491 429 ------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSA 461 (467)
Q Consensus 429 ------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l 461 (467)
..+|+++.+++.+|+..||++|+ ++.+....|
T Consensus 247 ~~~~~p~~~~~~~~~li~~cl~~dP~~RP-s~~~i~~~L 284 (299)
T 4asz_A 247 RVLQRPRTCPQEVYELMLGCWQREPHMRK-NIKGIHTLL 284 (299)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHH
T ss_pred CCCCCCccchHHHHHHHHHHcCCChhHCc-CHHHHHHHH
Confidence 23445689999999999999996 444544443
No 4
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-53 Score=402.00 Aligned_cols=231 Identities=25% Similarity=0.337 Sum_probs=200.7
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEE
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 293 (467)
++|++.+.||+|+||+||+|++. +|+.||+|++.+.. ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999986 48999999997542 344577999999999999999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC--
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK-- 371 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 371 (467)
|||+||+|.+++... +.+++.++..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999999999653 57999999999999999999999 999999999999999999999999999999987532
Q ss_pred -----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhcccccccccc
Q 041491 372 -----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVD 440 (467)
Q Consensus 372 -----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~ 440 (467)
...+|..|+|||.+.+..|+.++||||+||++|||+||+.||.+....+ .+..... ..+++++.++|.
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i~~~~~~~p~~~s~~~~dli~ 266 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-IFAKIIKLEYDFPEKFFPKARDLVE 266 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTCCHHHHHHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCcccCHHHHHHHH
Confidence 2357889999999999999999999999999999999999997643222 1222222 234556899999
Q ss_pred cccccchhHHHHH
Q 041491 441 TSLLRREDKYFAA 453 (467)
Q Consensus 441 ~~l~~~~~~r~~~ 453 (467)
+||.+||.+|+++
T Consensus 267 ~lL~~dp~~R~t~ 279 (311)
T 4aw0_A 267 KLLVLDATKRLGC 279 (311)
T ss_dssp HHSCSSGGGSTTS
T ss_pred HHccCCHhHCcCh
Confidence 9999999999854
No 5
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5e-53 Score=404.25 Aligned_cols=241 Identities=26% Similarity=0.400 Sum_probs=199.0
Q ss_pred hccCccCCccCcccceeEEEEEec------CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
.++|.+.++||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+.+..+
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 357888899999999999999874 37889999998766666788999999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc
Q 041491 291 LVLEYMANGSLEKCLYSSN--------------GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV 356 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~ 356 (467)
||||||++|+|.++++... +.+++.++..++.|++.||+||| +++|+||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCc
Confidence 9999999999999986532 36899999999999999999999 999999999999999999999
Q ss_pred EEEeccccceecCCC-------CccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh
Q 041491 357 AHLSDFGIAKLLNGK-------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN 428 (467)
Q Consensus 357 ~kl~Dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~ 428 (467)
+||+|||+|+..... ...++..|+|||++.+..++.++|||||||++|||+| |+.||.+....+ ....+.
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~i~ 274 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--AIDCIT 274 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--HHHHHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--HHHHHH
Confidence 999999999876432 2345678999999999999999999999999999999 899998653322 222221
Q ss_pred --------hhcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 429 --------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 429 --------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
..+|+++.+++.+|+..||++|+ ++.|.+..|-+
T Consensus 275 ~g~~~~~p~~~~~~~~~li~~cl~~dP~~RP-s~~ei~~~L~~ 316 (329)
T 4aoj_A 275 QGRELERPRACPPEVYAIMRGCWQREPQQRH-SIKDVHARLQA 316 (329)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHCCSSTTTSC-CHHHHHHHHHH
T ss_pred cCCCCCCcccccHHHHHHHHHHcCcChhHCc-CHHHHHHHHHH
Confidence 23455689999999999999996 55555555433
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.1e-53 Score=403.21 Aligned_cols=234 Identities=21% Similarity=0.244 Sum_probs=198.7
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
.+.|++.++||+|+||.||+|+++ +|+.||||+++.... ..+|+.++++++|||||++++++.+++..||||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 457888999999999999999986 489999999975422 24799999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC-cEEEeccccceecCCCC--
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLLNGKE-- 372 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~~-- 372 (467)
|+||+|.+++... +.+++.++..++.|++.||+||| ++||+||||||+|||++.+| ++||+|||+|+.+....
T Consensus 132 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999999654 57999999999999999999999 99999999999999999987 69999999999765321
Q ss_pred --------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH---------hhhccccc
Q 041491 373 --------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV---------NDFLPISV 435 (467)
Q Consensus 373 --------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~---------~~~~~~~~ 435 (467)
..+|..|+|||.+.+..|+.++||||+||++|||+||+.||.+....+. +.... ...+++.+
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~s~~~ 286 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEPPPIREIPPSCAPLT 286 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSCCGGGGSCTTSCHHH
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCCCCchhcCccCCHHH
Confidence 2478899999999999999999999999999999999999987543332 22221 22345568
Q ss_pred ccccccccccchhHHHHHHHHHHHHH
Q 041491 436 MNVVDTSLLRREDKYFAAKKQCVSSA 461 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~~~~~~~~~l 461 (467)
.++|.+||.+||.+|+ ++.|+++.+
T Consensus 287 ~~li~~~L~~dP~~R~-sa~el~~~l 311 (336)
T 4g3f_A 287 AQAIQEGLRKEPVHRA-SAMELRRKV 311 (336)
T ss_dssp HHHHHHHTCSSGGGSC-CHHHHHHHH
T ss_pred HHHHHHHccCCHhHCc-CHHHHHHHH
Confidence 9999999999999997 556665554
No 7
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.4e-54 Score=403.94 Aligned_cols=239 Identities=22% Similarity=0.272 Sum_probs=195.6
Q ss_pred ccCccCCccCcccceeEEEEEec----CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
++|++.+.||+|+||+||+|++. .++.||+|+++... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 68999999999999999999873 37889999997543 2234568899999999999999999999999999999
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 371 (467)
|||||+||+|.+++... +.+++.++..++.|++.||+||| ++||+||||||+|||++++|.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999999999654 57999999999999999999999 999999999999999999999999999999865432
Q ss_pred -----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH------hhhcccccccccc
Q 041491 372 -----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV------NDFLPISVMNVVD 440 (467)
Q Consensus 372 -----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~i~ 440 (467)
...+|..|+|||.+.+..|+.++||||+||++|||+||+.||.+....+. +.... ...+++++.++|.
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~li~ 258 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET-MTMILKAKLGMPQFLSPEAQSLLR 258 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH-HHHHHcCCCCCCCcCCHHHHHHHH
Confidence 23578899999999999999999999999999999999999986433221 11111 1234556999999
Q ss_pred cccccchhHHHHHHHHHHHHH
Q 041491 441 TSLLRREDKYFAAKKQCVSSA 461 (467)
Q Consensus 441 ~~l~~~~~~r~~~~~~~~~~l 461 (467)
+||.+||++|+++..+.++++
T Consensus 259 ~~L~~dP~~R~ta~~~~~~ei 279 (304)
T 3ubd_A 259 MLFKRNPANRLGAGPDGVEEI 279 (304)
T ss_dssp HHTCSSGGGSTTCSTTTHHHH
T ss_pred HHcccCHHHCCCCCcCCHHHH
Confidence 999999999998643333333
No 8
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-53 Score=397.87 Aligned_cols=241 Identities=27% Similarity=0.402 Sum_probs=198.2
Q ss_pred HHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 213 LLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 213 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
|++..+++++.++||+|+||+||+|++. ..||||+++... ....+.|.+|++++++++|||||++++++.+ +..+
T Consensus 31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~ 107 (307)
T 3omv_A 31 WEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLA 107 (307)
T ss_dssp CBCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred cEEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEE
Confidence 3455678889999999999999999874 469999987543 2345789999999999999999999998865 4579
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
||||||++|+|.++++.....+++.++..++.|++.||+||| +++||||||||+|||+++++.+||+|||+|+....
T Consensus 108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999999999877778999999999999999999999 99999999999999999999999999999987543
Q ss_pred C-------CccccccccccccccC---CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------------
Q 041491 371 K-------ESMRTQTLATIEYGRE---GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------------ 428 (467)
Q Consensus 371 ~-------~~~~~~~~~~pe~~~~---~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------------ 428 (467)
. ...+|..|+|||++.. +.|+.++|||||||++|||+||+.||.+...... +...+.
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~~~~~~p~~~~~~ 263 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYASPDLSKLY 263 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHTTCCCCCSTTSC
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcCCCCCCccccc
Confidence 2 2356788999998753 4689999999999999999999999976432221 111111
Q ss_pred hhcccccccccccccccchhHHHHHHHHHHHHH
Q 041491 429 DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSA 461 (467)
Q Consensus 429 ~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l 461 (467)
..+|+.+.+++.+|+..||++|+ ++.|++..+
T Consensus 264 ~~~~~~l~~li~~cl~~dP~~RP-s~~ei~~~L 295 (307)
T 3omv_A 264 KNCPKAMKRLVADCVKKVKEERP-LFPQILSSI 295 (307)
T ss_dssp TTSCHHHHHHHHHHTCSSSTTSC-CHHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCc-CHHHHHHHH
Confidence 12344588999999999999996 566666554
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2e-52 Score=388.51 Aligned_cols=240 Identities=21% Similarity=0.344 Sum_probs=190.7
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEE
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 293 (467)
++|++.+.||+|+||+||+|++. +|+.||+|++++.. ....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999986 59999999997542 234567899999999999999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC--
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK-- 371 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 371 (467)
||+ +|+|.+++... +.+++.++..++.|++.||+||| ++||+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp ECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 999 67999988654 57999999999999999999999 999999999999999999999999999999876543
Q ss_pred --CccccccccccccccCCCC-CCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhcccccccccccc
Q 041491 372 --ESMRTQTLATIEYGREGQV-SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVDTS 442 (467)
Q Consensus 372 --~~~~~~~~~~pe~~~~~~~-~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~ 442 (467)
...+|..|+|||.+.+..+ +.++||||+||++|||+||+.||.+..... .+..... ..+++++.++|.+|
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~li~~~ 246 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVYTLPKFLSPGAAGLIKRM 246 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTSCHHHHHHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence 2457889999999988776 579999999999999999999997643221 1111111 23455689999999
Q ss_pred cccchhHHHHHHHHHH-HHHHhc
Q 041491 443 LLRREDKYFAAKKQCV-SSALSL 464 (467)
Q Consensus 443 l~~~~~~r~~~~~~~~-~~l~~l 464 (467)
|..||++|++ ++|++ ..+++.
T Consensus 247 L~~dP~~R~s-~~eil~hpw~k~ 268 (275)
T 3hyh_A 247 LIVNPLNRIS-IHEIMQDDWFKV 268 (275)
T ss_dssp SCSSGGGSCC-HHHHHHCHHHHT
T ss_pred ccCChhHCcC-HHHHHcCccccc
Confidence 9999999985 44444 345543
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.9e-52 Score=407.22 Aligned_cols=234 Identities=23% Similarity=0.281 Sum_probs=203.1
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
.+.|++.+.||+|+||.||+|+++ +|+.||||++........+.+.+|+.+|++++|||||++++++.+++..||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 357999999999999999999986 4999999999877666667899999999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC----
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK---- 371 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 371 (467)
|+||+|.+++.. +.+++.++..++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 230 ~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 230 LEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp CTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred CCCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc
Confidence 999999999865 35899999999999999999999 999999999999999999999999999999987543
Q ss_pred -CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh----------hhcccccccccc
Q 041491 372 -ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN----------DFLPISVMNVVD 440 (467)
Q Consensus 372 -~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~----------~~~~~~~~~~i~ 440 (467)
...+|..|+|||.+.+..|+.++|||||||++|||++|+.||.+....+ ....+. ..+++++.++|.
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~~~~~~~~~~~~~~s~~~~dli~ 382 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIRDNLPPRLKNLHKVSPSLKGFLD 382 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCCSCTTSSCHHHHHHHH
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHcCCCCCCcccccCCHHHHHHHH
Confidence 2357888999999999999999999999999999999999997643221 112221 123456889999
Q ss_pred cccccchhHHHHHHHHHH
Q 041491 441 TSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 441 ~~l~~~~~~r~~~~~~~~ 458 (467)
+||..||++|++ +.|++
T Consensus 383 ~~L~~dP~~R~t-a~ell 399 (423)
T 4fie_A 383 RLLVRDPAQRAT-AAELL 399 (423)
T ss_dssp HHSCSSTTTSCC-HHHHT
T ss_pred HHcCCChhHCcC-HHHHh
Confidence 999999999985 44443
No 11
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.7e-52 Score=394.56 Aligned_cols=240 Identities=23% Similarity=0.332 Sum_probs=200.7
Q ss_pred ccCccCCccCcccceeEEEEEec------CCCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
.++++.+.||+|+||+||+|++. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 45677899999999999999863 367899999975433 34578999999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC
Q 041491 291 LVLEYMANGSLEKCLYSSN---------------GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM 355 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~ 355 (467)
+|||||++|+|.+++.... ..+++.++..++.|++.||+||| +++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 9999999999999996432 35899999999999999999999 99999999999999999999
Q ss_pred cEEEeccccceecCCC-------CccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHH
Q 041491 356 VAHLSDFGIAKLLNGK-------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWV 427 (467)
Q Consensus 356 ~~kl~Dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~ 427 (467)
.+||+|||+|+..... ...++..|+|||++..+.|+.++|||||||++|||+| |+.||.+.... .+...+
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~i 260 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEMI 260 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHHH
Confidence 9999999999865432 2346678999999999999999999999999999999 89999875332 223332
Q ss_pred h--------hhcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 428 N--------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 428 ~--------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
. ..+|+++.+++.+|+..||++|+ ++.|.+..|-+
T Consensus 261 ~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RP-s~~ei~~~L~a 303 (308)
T 4gt4_A 261 RNRQVLPCPDDCPAWVYALMIECWNEFPSRRP-RFKDIHSRLRA 303 (308)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHT
T ss_pred HcCCCCCCcccchHHHHHHHHHHcCCChhHCc-CHHHHHHHHHh
Confidence 2 22344588999999999999996 56666666544
No 12
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.2e-52 Score=387.74 Aligned_cols=233 Identities=24% Similarity=0.349 Sum_probs=191.3
Q ss_pred CccCCccCcccceeEEEEEecC-CCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeec----CCeeeEE
Q 041491 220 FSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSN----GNFEALV 292 (467)
Q Consensus 220 y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 292 (467)
|+..+.||+|+||+||+|.+.. ++.||+|++.... ....+.+.+|++++++++|||||++++++.+ .+..|||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 3666789999999999999864 8999999997542 2345679999999999999999999999865 3568999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeecC-CCcEEEeccccceecC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNVLLDD-DMVAHLSDFGIAKLLN 369 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~ 369 (467)
||||+||+|.+++... +.+++..+..++.||+.||+||| +++ |+||||||+|||++. ++.+||+|||+|+...
T Consensus 108 mEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999999653 57899999999999999999999 888 999999999999984 7899999999998655
Q ss_pred CCC---ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH--------Hhhhcccccccc
Q 041491 370 GKE---SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW--------VNDFLPISVMNV 438 (467)
Q Consensus 370 ~~~---~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~ 438 (467)
... ..+|+.|+|||.+.+ .|+.++|||||||++|||+||+.||.+........... .....++++.++
T Consensus 184 ~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 262 (290)
T 3fpq_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHH
Confidence 432 357889999998764 69999999999999999999999997533222111111 112233458899
Q ss_pred cccccccchhHHHHHHHHHH
Q 041491 439 VDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 439 i~~~l~~~~~~r~~~~~~~~ 458 (467)
|.+||..||++|++ +.|++
T Consensus 263 i~~~L~~dP~~R~s-~~e~l 281 (290)
T 3fpq_A 263 IEGCIRQNKDERYS-IKDLL 281 (290)
T ss_dssp HHHHSCSSGGGSCC-HHHHH
T ss_pred HHHHccCChhHCcC-HHHHh
Confidence 99999999999984 44544
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.7e-51 Score=391.85 Aligned_cols=249 Identities=20% Similarity=0.315 Sum_probs=205.7
Q ss_pred ccHHHHHHHhccCccCCccCcccceeEEEEEecC------CCeEEEEEeecccc-cchHHHHHHHHHHHcCCC-CCceeE
Q 041491 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLD------GMEVAIKVFHLQFD-GALKSFDAECEVLKSVRH-RNLVKI 279 (467)
Q Consensus 208 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~ 279 (467)
+..++|++..++|++.+.||+|+||+||+|++.. ++.||||+++.... ...+.+.+|++++++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4456788889999999999999999999998753 35799999976533 345679999999999976 899999
Q ss_pred EEEeec-CCeeeEEEecccCCCHHHhhhcC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecC
Q 041491 280 ISSCSN-GNFEALVLEYMANGSLEKCLYSS---------------NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343 (467)
Q Consensus 280 ~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 343 (467)
+|+|.. ++..+||||||++|+|.++++.. ...+++.++..++.||+.||+||| +++|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCc
Confidence 999866 45789999999999999999653 235899999999999999999999 99999999
Q ss_pred CCCCCeeecCCCcEEEeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCc
Q 041491 344 IKPSNVLLDDDMVAHLSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCE 415 (467)
Q Consensus 344 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~ 415 (467)
|||+|||+++++.+||+|||+|+...... ..++..|+|||++.++.|+.++|||||||++|||+| |+.||.+
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999765432 235667999999999999999999999999999998 9999987
Q ss_pred cccccccHHHHHh--------hhcccccccccccccccchhHHHHHHHHHHHHH
Q 041491 416 IFCEEMNLKNWVN--------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSA 461 (467)
Q Consensus 416 ~~~~~~~~~~~~~--------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l 461 (467)
....+. +...+. ...++++.+++.+|+..||.+|+ ++.|+++.|
T Consensus 291 ~~~~~~-~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RP-t~~eil~~L 342 (353)
T 4ase_A 291 VKIDEE-FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP-TFSELVEHL 342 (353)
T ss_dssp CCCSHH-HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHH
T ss_pred CCHHHH-HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCc-CHHHHHHHH
Confidence 543322 222222 22344689999999999999996 455555543
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8.8e-50 Score=377.24 Aligned_cols=234 Identities=22% Similarity=0.289 Sum_probs=184.7
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEeecCC--------
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSNGN-------- 287 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 287 (467)
++|++.+.||+|+||+||+|+++ +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46999999999999999999986 589999999976543 34567899999999999999999999986543
Q ss_pred ----eeeEEEecccCCCHHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEec
Q 041491 288 ----FEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSD 361 (467)
Q Consensus 288 ----~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~D 361 (467)
..|+|||||++|+|.+++..... ..++..++.++.|++.||+||| ++||+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 46899999999999999965433 3566778899999999999999 99999999999999999999999999
Q ss_pred cccceecCCCC-----------------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHH
Q 041491 362 FGIAKLLNGKE-----------------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLK 424 (467)
Q Consensus 362 fg~a~~~~~~~-----------------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~ 424 (467)
||+|+...... ..+|..|+|||.+.+..|+.++|||||||++|||++ ||.........+.
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~ 238 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence 99998765421 247888999999999999999999999999999996 8865322211122
Q ss_pred HHHhhhc-------ccccccccccccccchhHHHHHHHHHH
Q 041491 425 NWVNDFL-------PISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 425 ~~~~~~~-------~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
....... ++...++|.+||..||.+|++ +.|++
T Consensus 239 ~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps-~~eil 278 (299)
T 4g31_A 239 DVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPE-AINII 278 (299)
T ss_dssp HHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCC-HHHHH
T ss_pred HHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcC-HHHHh
Confidence 2222222 234678999999999999985 44444
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.4e-49 Score=373.62 Aligned_cols=242 Identities=19% Similarity=0.268 Sum_probs=187.1
Q ss_pred ccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCC----eeeEEE
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN----FEALVL 293 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 293 (467)
++|.+.+.||+|+||+||+|++ +|+.||||+++.... .....+.|+..+.+++||||+++++++.+++ ..||||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 5688889999999999999998 689999999875422 1222345566667889999999999997654 579999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG-----YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
|||++|+|.++++.. .+++..+.+++.|++.||+|||.. +.++|+||||||+|||+++++++||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999654 589999999999999999999921 1239999999999999999999999999999876
Q ss_pred CCCC---------ccccccccccccccCC------CCCCcccchhhHHHHHHHhcCCCCCCccc----------cccccH
Q 041491 369 NGKE---------SMRTQTLATIEYGREG------QVSPKSDVYGYGITLIETFTKKKPTCEIF----------CEEMNL 423 (467)
Q Consensus 369 ~~~~---------~~~~~~~~~pe~~~~~------~~~~~~Dv~slGvil~el~tg~~Pf~~~~----------~~~~~~ 423 (467)
.... ..+|..|+|||++.+. .++.++|||||||++|||+||+.||.... ......
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 4322 2467889999988654 46789999999999999999987764321 111122
Q ss_pred HHHHh--------hhcc---------cccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 424 KNWVN--------DFLP---------ISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 424 ~~~~~--------~~~~---------~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
..... ..+| +.+.+++.+|+..||++|+ ++.|.++.|-++
T Consensus 239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~ei~~~L~~l 295 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL-TALRIKKTLSQL 295 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCc-CHHHHHHHHHHH
Confidence 22211 1112 1356899999999999997 566666666544
No 16
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.8e-48 Score=375.15 Aligned_cols=192 Identities=20% Similarity=0.287 Sum_probs=169.1
Q ss_pred HHhccCccCCccCcccceeEEEEEec----CCCeEEEEEeecccccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCee
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 289 (467)
...++|++.+.||+|+||+||+|+++ .++.||+|.+.... ...++.+|+++++.+ +||||+++++++.+.+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34678999999999999999999864 36789999986543 346688999999998 699999999999999999
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC-CcEEEeccccceec
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIAKLL 368 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a~~~ 368 (467)
|+||||+++|+|.+++. .+++.++..+++|++.||+||| ++||+||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999883 4899999999999999999999 9999999999999999877 79999999999865
Q ss_pred CCCC---------------------------------ccccccccccccccCC-CCCCcccchhhHHHHHHHhcCCCCCC
Q 041491 369 NGKE---------------------------------SMRTQTLATIEYGREG-QVSPKSDVYGYGITLIETFTKKKPTC 414 (467)
Q Consensus 369 ~~~~---------------------------------~~~~~~~~~pe~~~~~-~~~~~~Dv~slGvil~el~tg~~Pf~ 414 (467)
.... ..+|..|+|||.+.+. .|+.++||||+||++|||+||+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 4321 2467889999988765 58999999999999999999999995
Q ss_pred c
Q 041491 415 E 415 (467)
Q Consensus 415 ~ 415 (467)
.
T Consensus 249 ~ 249 (361)
T 4f9c_A 249 K 249 (361)
T ss_dssp C
T ss_pred C
Confidence 4
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-47 Score=375.70 Aligned_cols=232 Identities=23% Similarity=0.288 Sum_probs=190.5
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeec------CCe
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSN------GNF 288 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~ 288 (467)
++|++.+.||+|+||+||+|++. +|+.||||+++.... ...+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999986 599999999975432 334678899999999999999999998754 367
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.|||||||+ |+|.+++.. .+.+++..+..+++||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~-~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 689998854 457999999999999999999999 999999999999999999999999999999876
Q ss_pred CCC---------CccccccccccccccCC-CCCCcccchhhHHHHHHHhcCCCCCCccccccc-----------------
Q 041491 369 NGK---------ESMRTQTLATIEYGREG-QVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM----------------- 421 (467)
Q Consensus 369 ~~~---------~~~~~~~~~~pe~~~~~-~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~----------------- 421 (467)
... ...+|..|+|||.+.+. .++.++||||+||++|||++|++||.+....+.
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 421 23578889999987764 569999999999999999999999975422110
Q ss_pred -----cHHHH--------------HhhhcccccccccccccccchhHHHHHH
Q 041491 422 -----NLKNW--------------VNDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 422 -----~~~~~--------------~~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
....+ ....+++++.++|.+||..||.+|+++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~ 340 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA 340 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHH
Confidence 00000 1122345678999999999999998543
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.8e-47 Score=389.27 Aligned_cols=233 Identities=21% Similarity=0.276 Sum_probs=195.3
Q ss_pred HhccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHH---HHHHHHcCCCCCceeEEEEeecCCe
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDA---ECEVLKSVRHRNLVKIISSCSNGNF 288 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~ 288 (467)
..++|++.+.||+|+||+||+|+++. |+.||+|++++.. ........+ ++.+++.++|||||++++++.+.+.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 34689999999999999999999874 9999999997542 122233334 4566778899999999999999999
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.|+|||||+||+|.+++... +.+++..+..++.||+.||+||| ++|||||||||+|||++.+|++||+|||+|+.+
T Consensus 267 lylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999999999654 57999999999999999999999 999999999999999999999999999999987
Q ss_pred CCC---CccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccc-cHHHHH-------hhhcccccc
Q 041491 369 NGK---ESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM-NLKNWV-------NDFLPISVM 436 (467)
Q Consensus 369 ~~~---~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~-~~~~~~-------~~~~~~~~~ 436 (467)
... ...+|+.|+|||.+.. ..|+.++||||+||++|||++|+.||.+....+. .+.... +..+++++.
T Consensus 343 ~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~ 422 (689)
T 3v5w_A 343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 422 (689)
T ss_dssp SSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred CCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHH
Confidence 643 3468899999999864 5799999999999999999999999976433221 111111 123455699
Q ss_pred cccccccccchhHHHH
Q 041491 437 NVVDTSLLRREDKYFA 452 (467)
Q Consensus 437 ~~i~~~l~~~~~~r~~ 452 (467)
++|.+||.+||.+|++
T Consensus 423 dLI~~lL~~dP~~Rl~ 438 (689)
T 3v5w_A 423 SLLEGLLQRDVNRRLG 438 (689)
T ss_dssp HHHHHHTCSCGGGCTT
T ss_pred HHHHHHccCCHhHCCC
Confidence 9999999999999986
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3e-47 Score=391.34 Aligned_cols=237 Identities=22% Similarity=0.293 Sum_probs=205.5
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
.++|++.+.||+|+||.||+|+++ +|+.||+|++........+.+.+|+++|+.++||||+++++++.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999986 4999999999876555667889999999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC--CcEEEeccccceecCCCCc
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD--MVAHLSDFGIAKLLNGKES 373 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~a~~~~~~~~ 373 (467)
|+||+|.+++....+.+++.++..++.||+.||+||| ++||+||||||+|||++.+ +.+||+|||+|+.+.....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999999777778999999999999999999999 9999999999999999854 8999999999998876543
Q ss_pred ----cccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH----------Hhhhccccccccc
Q 041491 374 ----MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW----------VNDFLPISVMNVV 439 (467)
Q Consensus 374 ----~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~----------~~~~~~~~~~~~i 439 (467)
.++..|+|||.+.+..|+.++||||+||++|||++|+.||.+....+. +... ....+++++.++|
T Consensus 313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~dli 391 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNMDDSAFSGISEDGKDFI 391 (573)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCCCCCSGGGTTSCHHHHHHH
T ss_pred eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHhCCCCCCcccccCCCHHHHHHH
Confidence 467889999999999999999999999999999999999976432221 1111 1223455688999
Q ss_pred ccccccchhHHHHHHHHHH
Q 041491 440 DTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 440 ~~~l~~~~~~r~~~~~~~~ 458 (467)
.+||..||.+|++ +.|++
T Consensus 392 ~~~L~~dp~~R~t-~~e~l 409 (573)
T 3uto_A 392 RKLLLADPNTRMT-IHQAL 409 (573)
T ss_dssp HTTSCSSGGGSCC-HHHHH
T ss_pred HHHccCChhHCcC-HHHHh
Confidence 9999999999984 44544
No 20
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=339.35 Aligned_cols=242 Identities=20% Similarity=0.296 Sum_probs=206.9
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 468999999999999999999986 4899999998766556678899999999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC---
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--- 372 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~--- 372 (467)
+++++|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999877778999999999999999999999 9999999999999999999999999999998764322
Q ss_pred ----------------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc----ccHHHHH----h
Q 041491 373 ----------------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE----MNLKNWV----N 428 (467)
Q Consensus 373 ----------------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~----~~~~~~~----~ 428 (467)
..++..|.+||...+..++.++||||||+++|||++|..||....... ....... .
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCP 245 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCC
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCC
Confidence 235667899999999999999999999999999999999987543322 2233333 3
Q ss_pred hhcccccccccccccccchhHHHHHHHHHHHHHH
Q 041491 429 DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 429 ~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
..+++.+.+++.+|+..||.+|+ ++.++++.|.
T Consensus 246 ~~~~~~l~~li~~~l~~dP~~Rp-s~~~l~~~L~ 278 (310)
T 3s95_A 246 PNCPPSFFPITVRCCDLDPEKRP-SFVKLEHWLE 278 (310)
T ss_dssp TTCCTTHHHHHHHHTCSSGGGSC-CHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHccCChhhCc-CHHHHHHHHH
Confidence 44566799999999999999995 3444444443
No 21
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.6e-44 Score=341.36 Aligned_cols=244 Identities=24% Similarity=0.348 Sum_probs=207.1
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 468999999999999999999976 48999999986543 23346788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+++++|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999998654 46899999999999999999999 9999999999999999999999999999998765332
Q ss_pred ------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc----------cHHHHHhhhcccccc
Q 041491 373 ------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM----------NLKNWVNDFLPISVM 436 (467)
Q Consensus 373 ------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~----------~~~~~~~~~~~~~~~ 436 (467)
..++..|.+||...+..++.++||||+|+++|||+||+.||.+...... .........+|+.+.
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLS 245 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHH
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHH
Confidence 2357788999999999999999999999999999999999976432221 122223345667799
Q ss_pred cccccccccchhHHHHHHHHHHHHHHhc
Q 041491 437 NVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 437 ~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
+++.+||..||.+|+++++++...|.++
T Consensus 246 ~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 246 NVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred HHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 9999999999999999999888887654
No 22
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8.9e-44 Score=338.17 Aligned_cols=232 Identities=27% Similarity=0.322 Sum_probs=200.0
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 468999999999999999999875 5899999999877666677889999999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC---
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--- 372 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~--- 372 (467)
+++|+|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 173 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc
Confidence 9999999998654 5899999999999999999999 9999999999999999999999999999998765432
Q ss_pred --ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH--------hhhcccccccccccc
Q 041491 373 --SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV--------NDFLPISVMNVVDTS 442 (467)
Q Consensus 373 --~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~i~~~ 442 (467)
..++..|.+||...+..++.++||||+||++|||+||+.||.............. ...+++.+.+++.+|
T Consensus 174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 253 (297)
T 3fxz_A 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253 (297)
T ss_dssp CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHH
T ss_pred CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHH
Confidence 2467778999999999999999999999999999999999976432221111111 123444588999999
Q ss_pred cccchhHHHHH
Q 041491 443 LLRREDKYFAA 453 (467)
Q Consensus 443 l~~~~~~r~~~ 453 (467)
|..||.+|++.
T Consensus 254 l~~dp~~Rps~ 264 (297)
T 3fxz_A 254 LEMDVEKRGSA 264 (297)
T ss_dssp SCSSTTTSCCH
T ss_pred ccCChhHCcCH
Confidence 99999999753
No 23
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.8e-43 Score=341.25 Aligned_cols=230 Identities=23% Similarity=0.277 Sum_probs=197.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|++. +|+.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 468999999999999999999986 48999999997542 33456788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC-
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK- 371 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 371 (467)
|||+++|+|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999988543 46899999999999999999999 999999999999999999999999999999864322
Q ss_pred ----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH------hhhccccccccccc
Q 041491 372 ----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV------NDFLPISVMNVVDT 441 (467)
Q Consensus 372 ----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~i~~ 441 (467)
...++..|.|||.+.+..++.++|||||||++|||++|+.||........ ..... ...+++++.++|.+
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~li~~ 238 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-FELILMEEIRFPRTLSPEAKSLLAG 238 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH-HHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 23467789999999999999999999999999999999999976432211 11111 12345568999999
Q ss_pred ccccchhHHH
Q 041491 442 SLLRREDKYF 451 (467)
Q Consensus 442 ~l~~~~~~r~ 451 (467)
||..||.+|+
T Consensus 239 lL~~dP~~R~ 248 (337)
T 1o6l_A 239 LLKKDPKQRL 248 (337)
T ss_dssp HTCSSTTTST
T ss_pred HhhcCHHHhc
Confidence 9999999997
No 24
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2e-43 Score=340.34 Aligned_cols=258 Identities=34% Similarity=0.527 Sum_probs=217.5
Q ss_pred cccccHHHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEe
Q 041491 205 WRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283 (467)
Q Consensus 205 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~ 283 (467)
...+++.++....++|++.+.||+|+||.||+|++.+++.||+|++..... .....+.+|+++++.++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456889999999999999999999999999999987899999999875532 2334689999999999999999999999
Q ss_pred ecCCeeeEEEecccCCCHHHhhhcCCC---CCCHHHHHHHHHHHHHHHHHHhcCCCC---CceecCCCCCCeeecCCCcE
Q 041491 284 SNGNFEALVLEYMANGSLEKCLYSSNG---ILDIFQRLSIMIDVALALEYLHFGYSN---PVVHCDIKPSNVLLDDDMVA 357 (467)
Q Consensus 284 ~~~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~LH~~~~~---~ivH~dlkp~NIll~~~~~~ 357 (467)
...+..++||||+++|+|.+++..... .+++..+..++.|++.||+||| ++ ||+||||||+||++++++.+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCCE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCCE
Confidence 999999999999999999999976432 5899999999999999999999 77 99999999999999999999
Q ss_pred EEeccccceecCCCCc------cccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc---ccccccHHHHHh
Q 041491 358 HLSDFGIAKLLNGKES------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI---FCEEMNLKNWVN 428 (467)
Q Consensus 358 kl~Dfg~a~~~~~~~~------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~---~~~~~~~~~~~~ 428 (467)
||+|||+++....... .++..|.+||...+..++.++|||||||++|||+||+.||+.. ........+|+.
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253 (326)
T ss_dssp EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence 9999999987653322 2567789999988888999999999999999999999999642 223334555544
Q ss_pred hhcc---------------------cccccccccccccchhHHHHHHHHHHHHHHhccc
Q 041491 429 DFLP---------------------ISVMNVVDTSLLRREDKYFAAKKQCVSSALSLAM 466 (467)
Q Consensus 429 ~~~~---------------------~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l~~ 466 (467)
.... ..+.+++.+||..||.+|+ ++.|+++.|-..++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~ell~~L~~~~~ 311 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP-KMSEVVRMLEGDGL 311 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSC-CHHHHHHHHHTSSC
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCC-CHHHHHHHhcCcch
Confidence 3222 2477888999999999997 67788888765543
No 25
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7.3e-44 Score=342.70 Aligned_cols=251 Identities=32% Similarity=0.480 Sum_probs=208.4
Q ss_pred ccHHHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCC
Q 041491 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN 287 (467)
Q Consensus 208 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 287 (467)
+++.++...+++|++.+.||+|+||.||+|++.+++.||+|++........+.+.+|++++++++||||+++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33444555778999999999999999999998889999999987765566778999999999999999999999999999
Q ss_pred eeeEEEecccCCCHHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccc
Q 041491 288 FEALVLEYMANGSLEKCLYSSN---GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGI 364 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 364 (467)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999986543 25899999999999999999999 99999999999999999999999999999
Q ss_pred ceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc-ccHHHHHh--------
Q 041491 365 AKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE-MNLKNWVN-------- 428 (467)
Q Consensus 365 a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~-~~~~~~~~-------- 428 (467)
++...... ..++..|.+||...++.++.++||||||+++|||+||+.||......+ .....|..
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 98754321 235677899999888899999999999999999999999997643322 23333321
Q ss_pred -------------hhcccccccccccccccchhHHHHHHHHHHHHHH
Q 041491 429 -------------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 429 -------------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
...+..+.+++.+||..||++|+ ++.|+++.+-
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp-s~~ell~~L~ 311 (321)
T 2qkw_B 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRP-SMGDVLWKLE 311 (321)
T ss_dssp CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSC-CHHHHHHHHH
T ss_pred HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCc-CHHHHHHHHH
Confidence 11122467888899999999996 4555555543
No 26
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-43 Score=337.07 Aligned_cols=234 Identities=19% Similarity=0.279 Sum_probs=200.9
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
.++|++.+.||+|+||.||+|.+.. ++.||+|++... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4689999999999999999999864 889999998754 23456688999999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC--CCcEEEeccccceecCCCCc
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD--DMVAHLSDFGIAKLLNGKES 373 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~ 373 (467)
+++|+|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999999776667999999999999999999999 999999999999999987 78999999999998765432
Q ss_pred ----cccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH----------Hhhhccccccccc
Q 041491 374 ----MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW----------VNDFLPISVMNVV 439 (467)
Q Consensus 374 ----~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~----------~~~~~~~~~~~~i 439 (467)
.++..|.+||...+..++.++||||+||++|||++|+.||......+ ..... ....+++++.+++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li 238 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIENIMNAEYTFDEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCCCHHHHTTSCHHHHHHH
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-HHHHHHcCCCCCChhhhccCCHHHHHHH
Confidence 35667899999888888999999999999999999999997643221 11111 2234566799999
Q ss_pred ccccccchhHHHHHHH
Q 041491 440 DTSLLRREDKYFAAKK 455 (467)
Q Consensus 440 ~~~l~~~~~~r~~~~~ 455 (467)
.+||..||.+|++..+
T Consensus 239 ~~~L~~dp~~Rpt~~e 254 (321)
T 1tki_A 239 DRLLVKERKSRMTASE 254 (321)
T ss_dssp HTTSCSSGGGSCCHHH
T ss_pred HHHcCCChhHCcCHHH
Confidence 9999999999986443
No 27
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.7e-43 Score=338.04 Aligned_cols=246 Identities=27% Similarity=0.381 Sum_probs=196.6
Q ss_pred cHHHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecC
Q 041491 209 SYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNG 286 (467)
Q Consensus 209 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 286 (467)
...++.+..++|++.+.||+|+||.||+|++ +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 28 ~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp ----CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred CcccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 3445556678999999999999999999987 68899999987553 23346788999999999999999999999999
Q ss_pred CeeeEEEecccCCCHHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeecCCCcEEEecc
Q 041491 287 NFEALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNVLLDDDMVAHLSDF 362 (467)
Q Consensus 287 ~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlkp~NIll~~~~~~kl~Df 362 (467)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+||| ++| |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCC
Confidence 999999999999999999965432 3899999999999999999999 999 999999999999999999999999
Q ss_pred ccceecCCC-----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH---------h
Q 041491 363 GIAKLLNGK-----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV---------N 428 (467)
Q Consensus 363 g~a~~~~~~-----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~---------~ 428 (467)
|+++..... ...++..|.+||...+..++.++|||||||++|||+||+.||......+. ...+ .
T Consensus 184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~~~~~~~~~~~~~ 261 (309)
T 3p86_A 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VAAVGFKCKRLEIP 261 (309)
T ss_dssp C-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHHSCCCCCCC
T ss_pred CCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhcCCCCCCC
Confidence 999865433 23467789999999999999999999999999999999999986433221 1111 1
Q ss_pred hhcccccccccccccccchhHHHHHHHHHHHHH
Q 041491 429 DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSA 461 (467)
Q Consensus 429 ~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l 461 (467)
..+++.+.+++.+||..+|.+|+ ++.++++.|
T Consensus 262 ~~~~~~l~~li~~~l~~dP~~Rp-s~~~ll~~L 293 (309)
T 3p86_A 262 RNLNPQVAAIIEGCWTNEPWKRP-SFATIMDLL 293 (309)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSC-CHHHHHHHH
T ss_pred ccCCHHHHHHHHHHccCChhhCc-CHHHHHHHH
Confidence 23455689999999999999995 344444433
No 28
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.7e-43 Score=341.53 Aligned_cols=238 Identities=22% Similarity=0.290 Sum_probs=199.8
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 4689999999999999999999864 8899999997542 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||++||+|.+++.. .+.+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999999999864 457999999999999999999999 9999999999999999999999999999999775432
Q ss_pred ----ccccccccccccccC---CCCCCcccchhhHHHHHHHhcCCCCCCccccccc-cHHHHH-------hhhccccccc
Q 041491 373 ----SMRTQTLATIEYGRE---GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM-NLKNWV-------NDFLPISVMN 437 (467)
Q Consensus 373 ----~~~~~~~~~pe~~~~---~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~-~~~~~~-------~~~~~~~~~~ 437 (467)
..++..|.|||.+.. ..++.++|||||||++|||++|+.||........ ...... ...+++.+.+
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~~ 249 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVS 249 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHHH
Confidence 346778999998863 4589999999999999999999999975322211 111111 1234456899
Q ss_pred ccccccccchhHHHHHHHHHH
Q 041491 438 VVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 438 ~i~~~l~~~~~~r~~~~~~~~ 458 (467)
++.+||..+|.+|+++++++.
T Consensus 250 li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 250 LLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp HHHHHSCSSGGGSCCSHHHHH
T ss_pred HHHHHhcCCHhHhcccHHHHH
Confidence 999999999999987655543
No 29
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1e-43 Score=353.88 Aligned_cols=237 Identities=21% Similarity=0.287 Sum_probs=199.9
Q ss_pred cHHHHHHHhccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEee
Q 041491 209 SYQELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCS 284 (467)
Q Consensus 209 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 284 (467)
.+.++....++|++.+.||+|+||+||+|++.. ++.||+|+++... ......+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 355666778899999999999999999999875 7899999997532 223345889999999999999999999999
Q ss_pred cCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccc
Q 041491 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGI 364 (467)
Q Consensus 285 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 364 (467)
+.+..|+||||+++|+|.+++....+.+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhh
Confidence 999999999999999999999776678999999999999999999999 99999999999999999999999999999
Q ss_pred ceecCCCC------cccccccccccccc-----CCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh-----
Q 041491 365 AKLLNGKE------SMRTQTLATIEYGR-----EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN----- 428 (467)
Q Consensus 365 a~~~~~~~------~~~~~~~~~pe~~~-----~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~----- 428 (467)
|+...... ..++..|.|||++. .+.++.++|||||||++|||++|+.||......+. +.....
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~~~~~~ 300 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHKERF 300 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHHC
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-HHhhhhccccc
Confidence 98765432 34677889999876 56789999999999999999999999976433221 111111
Q ss_pred ------hhcccccccccccccccchhH
Q 041491 429 ------DFLPISVMNVVDTSLLRREDK 449 (467)
Q Consensus 429 ------~~~~~~~~~~i~~~l~~~~~~ 449 (467)
..+++++.++|.++|..+|++
T Consensus 301 ~~p~~~~~~s~~~~dLi~~lL~~~~~r 327 (437)
T 4aw2_A 301 QFPTQVTDVSENAKDLIRRLICSREHR 327 (437)
T ss_dssp CCCSSCCCSCHHHHHHHHTTSSCGGGC
T ss_pred cCCcccccCCHHHHHHHHHHhcccccc
Confidence 114456889999999888776
No 30
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.8e-43 Score=338.92 Aligned_cols=231 Identities=24% Similarity=0.338 Sum_probs=196.9
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
..++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 3468999999999999999999985 69999999997653 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+++|+|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp ECCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999998554 46899999999999999999999 9999999999999999999999999999998765432
Q ss_pred ----ccccccccccccccCCCCC-CcccchhhHHHHHHHhcCCCCCCccccccccHHHHH-h------hhcccccccccc
Q 041491 373 ----SMRTQTLATIEYGREGQVS-PKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV-N------DFLPISVMNVVD 440 (467)
Q Consensus 373 ----~~~~~~~~~pe~~~~~~~~-~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~-~------~~~~~~~~~~i~ 440 (467)
..++..|.|||.+.+..++ +++||||+||++|||++|+.||.+....+ +...+ . ...++++.+++.
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~i~~~~~~~p~~~s~~~~~li~ 246 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE--LRERVLRGKYRIPFYMSTDCENLLK 246 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 3467788999998887765 79999999999999999999997643222 11111 1 123456889999
Q ss_pred cccccchhHHHH
Q 041491 441 TSLLRREDKYFA 452 (467)
Q Consensus 441 ~~l~~~~~~r~~ 452 (467)
+||..||.+|++
T Consensus 247 ~~L~~dP~~R~t 258 (328)
T 3fe3_A 247 RFLVLNPIKRGT 258 (328)
T ss_dssp HHCCSSTTTSCC
T ss_pred HHCCCChhHCcC
Confidence 999999999975
No 31
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-43 Score=348.69 Aligned_cols=245 Identities=22% Similarity=0.313 Sum_probs=204.2
Q ss_pred cHHHHHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEee
Q 041491 209 SYQELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCS 284 (467)
Q Consensus 209 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 284 (467)
.+.+.....++|++.+.||+|+||.||+|+++ +|+.||+|++++.. ....+.+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 45566677899999999999999999999986 58999999997532 233456889999999999999999999999
Q ss_pred cCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccc
Q 041491 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGI 364 (467)
Q Consensus 285 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 364 (467)
+.+..|+||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechh
Confidence 999999999999999999999766567999999999999999999999 99999999999999999999999999999
Q ss_pred ceecCCCC------cccccccccccccc-------CCCCCCcccchhhHHHHHHHhcCCCCCCccccccc--cHHHHH--
Q 041491 365 AKLLNGKE------SMRTQTLATIEYGR-------EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM--NLKNWV-- 427 (467)
Q Consensus 365 a~~~~~~~------~~~~~~~~~pe~~~-------~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~--~~~~~~-- 427 (467)
++...... ..++..|.|||++. .+.++.++|||||||++|||++|+.||......+. ....+.
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~ 288 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH 288 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC
Confidence 98875432 24677889999876 45689999999999999999999999976433221 111111
Q ss_pred ------hhhcccccccccccccccchhHHH--HHHHHH
Q 041491 428 ------NDFLPISVMNVVDTSLLRREDKYF--AAKKQC 457 (467)
Q Consensus 428 ------~~~~~~~~~~~i~~~l~~~~~~r~--~~~~~~ 457 (467)
...+++++.++|.+||. +|.+|. .+++|+
T Consensus 289 ~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei 325 (412)
T 2vd5_A 289 LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDF 325 (412)
T ss_dssp CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHH
T ss_pred cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHH
Confidence 12355679999999998 999984 244444
No 32
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-43 Score=340.05 Aligned_cols=232 Identities=24% Similarity=0.313 Sum_probs=191.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 578999999999999999999985 58999999997653 2334678899999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC--
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-- 372 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 372 (467)
|+++|+|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||++.......
T Consensus 89 ~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 89 YCPGGELFDYIISQ-DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 99999999998554 46899999999999999999999 9999999999999999999999999999988664322
Q ss_pred ----ccccccccccccccCCCC-CCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhccccccccccc
Q 041491 373 ----SMRTQTLATIEYGREGQV-SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVDT 441 (467)
Q Consensus 373 ----~~~~~~~~~pe~~~~~~~-~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~~ 441 (467)
..++..|.|||.+.+..+ +.++||||+||++|||++|+.||.+....+ ....... ..+++.+.+++.+
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~li~~ 243 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA-LYKKIMRGKYDVPKWLSPSSILLLQQ 243 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTCCHHHHHHHHH
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 246778999999887775 889999999999999999999997643221 1111111 1234558889999
Q ss_pred ccccchhHHHHH
Q 041491 442 SLLRREDKYFAA 453 (467)
Q Consensus 442 ~l~~~~~~r~~~ 453 (467)
||..||.+|++.
T Consensus 244 ~L~~dP~~Rps~ 255 (347)
T 3zgw_A 244 MLQVDPKKRISM 255 (347)
T ss_dssp HTCSSGGGSCCH
T ss_pred HcccCHhHCcCH
Confidence 999999999853
No 33
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-43 Score=335.93 Aligned_cols=231 Identities=23% Similarity=0.314 Sum_probs=198.9
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 468999999999999999999986 58999999997542 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+++|+|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~ 160 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160 (318)
T ss_dssp ECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred EeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCcc
Confidence 9999999999998653 46899999999999999999999 9999999999999999999999999999998775432
Q ss_pred --ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhcccccccccccccc
Q 041491 373 --SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVDTSLL 444 (467)
Q Consensus 373 --~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~l~ 444 (467)
..++..|.|||...+..++.++||||+||++|||++|+.||.+....+ ....... ..+++++.+++.+||.
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~li~~lL~ 239 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-TYEKILNAELRFPPFFNEDVKDLLSRLIT 239 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHCCCCCCTTSCHHHHHHHHHHTC
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCCCCCHHHHHHHHHHhc
Confidence 356778999999999999999999999999999999999997643221 1122222 2344568999999999
Q ss_pred cchhHHHH
Q 041491 445 RREDKYFA 452 (467)
Q Consensus 445 ~~~~~r~~ 452 (467)
.||.+|+.
T Consensus 240 ~dp~~R~~ 247 (318)
T 1fot_A 240 RDLSQRLG 247 (318)
T ss_dssp SCTTTCTT
T ss_pred cCHHHcCC
Confidence 99999984
No 34
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.1e-42 Score=338.76 Aligned_cols=233 Identities=21% Similarity=0.288 Sum_probs=199.7
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccccc------chHHHHHHHHHHHcCCCCCceeEEEEeecCCee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG------ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 289 (467)
.++|++.+.||+|+||.||+|++. +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 468999999999999999999986 4899999999765321 346789999999999999999999999999999
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC----cEEEeccccc
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM----VAHLSDFGIA 365 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg~a 365 (467)
++||||+++|+|.+++.. .+.+++..+..++.|++.||.||| ++||+||||||+||++++++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999999854 457899999999999999999999 99999999999999998877 7999999999
Q ss_pred eecCCC----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc---------cHHHHHhhhcc
Q 041491 366 KLLNGK----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM---------NLKNWVNDFLP 432 (467)
Q Consensus 366 ~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~---------~~~~~~~~~~~ 432 (467)
+..... ...++..|.+||...+..++.++||||+||++|||++|..||.+....+. .+..-.+..++
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s 246 (361)
T 2yab_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246 (361)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCC
Confidence 887643 23467789999999988999999999999999999999999976432211 11112234456
Q ss_pred cccccccccccccchhHHHHH
Q 041491 433 ISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 433 ~~~~~~i~~~l~~~~~~r~~~ 453 (467)
+.+.++|.+||..||.+|++.
T Consensus 247 ~~~~~li~~~L~~dP~~R~t~ 267 (361)
T 2yab_A 247 ELAKDFIRKLLVKETRKRLTI 267 (361)
T ss_dssp HHHHHHHHHHSCSSTTTSCCH
T ss_pred HHHHHHHHHHCCCChhHCcCH
Confidence 679999999999999999854
No 35
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-42 Score=324.20 Aligned_cols=244 Identities=24% Similarity=0.359 Sum_probs=205.7
Q ss_pred HHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
+..++|++.+.||+|+||.||+|++.+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred eChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 3457899999999999999999999888999999997553 344678999999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC---
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK--- 371 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 371 (467)
|+++++|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred eCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 99999999999877778999999999999999999999 999999999999999999999999999999866432
Q ss_pred ---CccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh-------hhcccccccccc
Q 041491 372 ---ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN-------DFLPISVMNVVD 440 (467)
Q Consensus 372 ---~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~i~ 440 (467)
....+..|.+||......++.++||||+|+++|||++ |+.||......+ ....... ...++.+.+++.
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~ 241 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVEDISTGFRLYKPRLASTHVYQIMN 241 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-HHHHHhcCccCCCCCcCCHHHHHHHH
Confidence 2234456899999988899999999999999999999 999997643322 1111111 123445889999
Q ss_pred cccccchhHHHHHHHHHHHHHHhc
Q 041491 441 TSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 441 ~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
+||..+|.+|+ ++.++++.+.++
T Consensus 242 ~~l~~~p~~Rp-s~~~ll~~l~~l 264 (269)
T 4hcu_A 242 HCWRERPEDRP-AFSRLLRQLAEI 264 (269)
T ss_dssp HHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHccCCcccCc-CHHHHHHHHHHH
Confidence 99999999996 455566555443
No 36
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.8e-43 Score=337.42 Aligned_cols=241 Identities=24% Similarity=0.383 Sum_probs=200.2
Q ss_pred HhccCccCCccCcccceeEEEEEec----CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
..++|++.+.||+|+||.||+|.+. .+..||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 3568999999999999999999985 24569999997653 334567899999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
+||||+++|+|.+++....+.+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 999999999999999777778999999999999999999999 99999999999999999999999999999997754
Q ss_pred CCc--------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhccc
Q 041491 371 KES--------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPI 433 (467)
Q Consensus 371 ~~~--------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~ 433 (467)
... ..+..|.+||...+..++.++|||||||++|||++ |+.||......+ ....+. ..+++
T Consensus 204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 281 (325)
T 3kul_A 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSVEEGYRLPAPMGCPH 281 (325)
T ss_dssp ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHTTCCCCCCTTCCH
T ss_pred CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcCCCCCCCCCcCH
Confidence 321 12345899999988889999999999999999999 999997643322 112211 12445
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHH
Q 041491 434 SVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 434 ~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
.+.+++.+||..||.+|+ ++.+++..|.
T Consensus 282 ~l~~li~~~l~~dp~~Rp-s~~eil~~L~ 309 (325)
T 3kul_A 282 ALHQLMLDCWHKDRAQRP-RFSQIVSVLD 309 (325)
T ss_dssp HHHHHHHHHTCSSGGGSC-CHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCc-CHHHHHHHHH
Confidence 689999999999999995 4445554443
No 37
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.1e-43 Score=327.35 Aligned_cols=243 Identities=25% Similarity=0.323 Sum_probs=207.1
Q ss_pred HhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
..++|++.+.||+|+||.||+|++.++..||+|+++... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 457899999999999999999999888899999997553 3456789999999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCCc--
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES-- 373 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-- 373 (467)
+++++|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++........
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 9999999999776667999999999999999999999 99999999999999999999999999999987654432
Q ss_pred ----cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh-------hhccccccccccc
Q 041491 374 ----MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN-------DFLPISVMNVVDT 441 (467)
Q Consensus 374 ----~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~ 441 (467)
..+..|.+||...+..++.++||||+|+++|||+| |+.||......+. ...... ...++.+.+++.+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~ 240 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-VLKVSQGHRLYRPHLASDTIYQIMYS 240 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHHHHTTCCCCCCTTSCHHHHHHHHH
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH-HHHHHcCCCCCCCCcChHHHHHHHHH
Confidence 23445899999988889999999999999999999 9999976433321 111111 1234458899999
Q ss_pred ccccchhHHHHHHHHHHHHHHhc
Q 041491 442 SLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 442 ~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
||..+|.+|+ ++.++++.|.++
T Consensus 241 ~l~~~p~~Rp-s~~~ll~~L~~l 262 (268)
T 3sxs_A 241 CWHELPEKRP-TFQQLLSSIEPL 262 (268)
T ss_dssp TTCSSGGGSC-CHHHHHHHHGGG
T ss_pred HcCCChhhCc-CHHHHHHHHHHh
Confidence 9999999995 677888877654
No 38
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.2e-43 Score=339.53 Aligned_cols=244 Identities=21% Similarity=0.350 Sum_probs=201.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc---cchHHHHHHHHHHHcCCCCCceeEEEEeecCCe----
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD---GALKSFDAECEVLKSVRHRNLVKIISSCSNGNF---- 288 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 288 (467)
.++|++.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 468999999999999999999985 589999999976532 234578899999999999999999999876543
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.++||||+++++|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 49999999999999998644 46899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCC--------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccH---------HHHHhhhc
Q 041491 369 NGKE--------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL---------KNWVNDFL 431 (467)
Q Consensus 369 ~~~~--------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~---------~~~~~~~~ 431 (467)
.... ..++..|.+||...+..++.++||||||+++|||+||+.||......+... .......+
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 246 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTC
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCC
Confidence 5322 235778899999998999999999999999999999999997643322211 11122345
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 432 PISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 432 ~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
++++.+++.+||..||.+|+++++++...+.++
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 667999999999999999999888888888764
No 39
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=342.47 Aligned_cols=235 Identities=22% Similarity=0.283 Sum_probs=196.0
Q ss_pred HHHhccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCe
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNF 288 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 288 (467)
....++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|..+++.+ +||||+++++++.+.+.
T Consensus 19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 98 (353)
T 3txo_A 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR 98 (353)
T ss_dssp ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence 3456799999999999999999999864 8999999997542 23456678999999988 79999999999999999
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.|+||||+++|+|.+++... +.+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+|+..
T Consensus 99 ~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 99 LFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 99999999999999998654 46899999999999999999999 999999999999999999999999999999864
Q ss_pred CCC-----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhccccccc
Q 041491 369 NGK-----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMN 437 (467)
Q Consensus 369 ~~~-----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~ 437 (467)
... ...++..|.|||.+.+..++.++||||+||++|||++|+.||......+ ....... ..+++.+.+
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~ 253 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAILNDEVVYPTWLHEDATG 253 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHHHH
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHH
Confidence 322 2346778899999888889999999999999999999999997643322 1122222 124456899
Q ss_pred ccccccccchhHHHHH
Q 041491 438 VVDTSLLRREDKYFAA 453 (467)
Q Consensus 438 ~i~~~l~~~~~~r~~~ 453 (467)
++.+||..+|.+|+++
T Consensus 254 li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 254 ILKSFMTKNPTMRLGS 269 (353)
T ss_dssp HHHHHTCSSGGGSTTS
T ss_pred HHHHHhhhCHHHccCC
Confidence 9999999999999875
No 40
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.2e-42 Score=340.35 Aligned_cols=242 Identities=22% Similarity=0.348 Sum_probs=201.4
Q ss_pred HhccCccCCccCcccceeEEEEEec--------CCCeEEEEEeecccc-cchHHHHHHHHHHHcC-CCCCceeEEEEeec
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL--------DGMEVAIKVFHLQFD-GALKSFDAECEVLKSV-RHRNLVKIISSCSN 285 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 285 (467)
..++|++.+.||+|+||.||+|++. ++..||+|+++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 4578999999999999999999863 245799999975532 3456789999999999 89999999999999
Q ss_pred CCeeeEEEecccCCCHHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCee
Q 041491 286 GNFEALVLEYMANGSLEKCLYSSN---------------GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVL 350 (467)
Q Consensus 286 ~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIl 350 (467)
.+..|+||||+++|+|.+++.... ..+++.++..++.|++.||+||| ++||+||||||+||+
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEE
Confidence 999999999999999999987643 24789999999999999999999 999999999999999
Q ss_pred ecCCCcEEEeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCcccccccc
Q 041491 351 LDDDMVAHLSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMN 422 (467)
Q Consensus 351 l~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~ 422 (467)
++.++.+||+|||+++...... ...+..|.+||.+.+..++.++|||||||++|||+| |+.||.+....+
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~-- 313 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-- 313 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 9999999999999998765432 223456899999999999999999999999999999 999997643322
Q ss_pred HHHHHhh--------hcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 423 LKNWVND--------FLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 423 ~~~~~~~--------~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
....+.. .+++++.+++.+||..+|.+|+ ++.|+++.|.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp-t~~ell~~L~~ 361 (370)
T 2psq_A 314 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP-TFKQLVEDLDR 361 (370)
T ss_dssp HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHH
Confidence 2222221 2344688999999999999995 56666655544
No 41
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.9e-43 Score=331.40 Aligned_cols=247 Identities=24% Similarity=0.346 Sum_probs=205.3
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
.+.+..++|++.+.||+|+||.||+|.+.++..||+|+++... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp TTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred CccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence 3445678999999999999999999999888899999997553 345778999999999999999999999999999999
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 371 (467)
||||+++++|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp EECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 99999999999999776667999999999999999999999 999999999999999999999999999999866432
Q ss_pred ------CccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh-------hhccccccc
Q 041491 372 ------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN-------DFLPISVMN 437 (467)
Q Consensus 372 ------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~ 437 (467)
....+..|.+||......++.++||||+|+++|||+| |+.||......+. ...... ...++.+.+
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 252 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-AEHIAQGLRLYRPHLASEKVYT 252 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHHHHTTCCCCCCTTCCHHHHH
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH-HHHHhcccCCCCCCcCCHHHHH
Confidence 2233456899999988889999999999999999998 9999976432221 111111 123445889
Q ss_pred ccccccccchhHHHHHHHHHHHHHHhc
Q 041491 438 VVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 438 ~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
++.+||..+|.+|+ ++.+++..|.++
T Consensus 253 li~~~l~~~p~~Rp-s~~~ll~~L~~~ 278 (283)
T 3gen_A 253 IMYSCWHEKADERP-TFKILLSNILDV 278 (283)
T ss_dssp HHHHTTCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHHHHccCChhHCc-CHHHHHHHHHHH
Confidence 99999999999996 566777766553
No 42
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.9e-43 Score=340.21 Aligned_cols=233 Identities=23% Similarity=0.276 Sum_probs=200.7
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 468999999999999999999986 58999999997542 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+++|+|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999998654 46899999999999999999999 9999999999999999999999999999999876543
Q ss_pred --ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhcccccccccccccc
Q 041491 373 --SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVDTSLL 444 (467)
Q Consensus 373 --~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~l~ 444 (467)
..++..|.+||.+.+..++.++|||||||++|||++|+.||......+ ....... ..+++.+.++|.+||.
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~li~~lL~ 274 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-IYEKIVSGKVRFPSHFSSDLKDLLRNLLQ 274 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTCCHHHHHHHHHHSC
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH-HHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Confidence 356788999999999999999999999999999999999997643221 1222221 2345569999999999
Q ss_pred cchhHHHHHH
Q 041491 445 RREDKYFAAK 454 (467)
Q Consensus 445 ~~~~~r~~~~ 454 (467)
.||.+|++++
T Consensus 275 ~dp~~R~~~~ 284 (350)
T 1rdq_E 275 VDLTKRFGNL 284 (350)
T ss_dssp SCTTTCTTSS
T ss_pred cCHHhccCCc
Confidence 9999998743
No 43
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.5e-42 Score=330.82 Aligned_cols=245 Identities=22% Similarity=0.259 Sum_probs=206.4
Q ss_pred ccccHHHHHHHhcc----------CccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCC
Q 041491 206 RRFSYQELLLATDH----------FSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHR 274 (467)
Q Consensus 206 ~~~~~~~~~~~~~~----------y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 274 (467)
..++++++..+++. |+..+.||+|+||.||+|++. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34677777766653 777889999999999999987 5999999999876666667899999999999999
Q ss_pred CceeEEEEeecCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC
Q 041491 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD 354 (467)
Q Consensus 275 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 354 (467)
||+++++++...+..++||||+++++|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 999999999999999999999999999998854 46899999999999999999999 9999999999999999999
Q ss_pred CcEEEeccccceecCCCC-----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh-
Q 041491 355 MVAHLSDFGIAKLLNGKE-----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN- 428 (467)
Q Consensus 355 ~~~kl~Dfg~a~~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~- 428 (467)
+.+||+|||++....... ..++..|.+||+..+..++.++||||||+++|||++|+.||......+ ......
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~~~~~ 255 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLRD 255 (321)
T ss_dssp CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHH
T ss_pred CcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhc
Confidence 999999999998765432 346777899999999999999999999999999999999997542221 111111
Q ss_pred ---------hhcccccccccccccccchhHHHHHHHHHH
Q 041491 429 ---------DFLPISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 429 ---------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
..+++.+.+++.+||..||.+|++ +.+++
T Consensus 256 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-~~ell 293 (321)
T 2c30_A 256 SPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT-AQELL 293 (321)
T ss_dssp SSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCC-HHHHH
T ss_pred CCCCCcCccccCCHHHHHHHHHHccCChhhCcC-HHHHh
Confidence 123455889999999999999974 44443
No 44
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=331.01 Aligned_cols=237 Identities=20% Similarity=0.272 Sum_probs=200.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccccc------chHHHHHHHHHHHcCCCCCceeEEEEeecCCee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG------ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 289 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 467999999999999999999986 4899999999754321 356789999999999999999999999999999
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC----cEEEeccccc
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM----VAHLSDFGIA 365 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg~a 365 (467)
++||||+++++|.+++.. ...+++..+..++.|++.||.||| ++||+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999854 457899999999999999999999 99999999999999999887 8999999999
Q ss_pred eecCCC----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc---------cHHHHHhhhcc
Q 041491 366 KLLNGK----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM---------NLKNWVNDFLP 432 (467)
Q Consensus 366 ~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~---------~~~~~~~~~~~ 432 (467)
+..... ...++..|.+||......++.++|||||||++|||++|+.||......+. ..........+
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCC
Confidence 887533 23467789999999989999999999999999999999999975432211 11111223455
Q ss_pred cccccccccccccchhHHHHHHHHHH
Q 041491 433 ISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 433 ~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
+.+.+++.+||..||.+|++ +.|++
T Consensus 246 ~~~~~li~~~L~~dP~~Rpt-~~e~l 270 (326)
T 2y0a_A 246 ALAKDFIRRLLVKDPKKRMT-IQDSL 270 (326)
T ss_dssp HHHHHHHHHHSCSSGGGSCC-HHHHH
T ss_pred HHHHHHHHHHccCChhhCCC-HHHHh
Confidence 66899999999999999985 33443
No 45
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-42 Score=341.52 Aligned_cols=235 Identities=22% Similarity=0.271 Sum_probs=195.5
Q ss_pred HHhccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCee
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 289 (467)
...++|++.+.||+|+||.||+|+++. ++.||+|++++.. ....+.+.+|..++.++ +||||+++++++.+.+..
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 128 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 128 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence 345789999999999999999999874 8899999998653 22345688999999887 899999999999999999
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
++||||+++|+|.+++... +.+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+|+...
T Consensus 129 ~lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 9999999999999988653 56899999999999999999999 9999999999999999999999999999998633
Q ss_pred C-----CCccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc---cc----HHHH-Hh------hh
Q 041491 370 G-----KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE---MN----LKNW-VN------DF 430 (467)
Q Consensus 370 ~-----~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~---~~----~~~~-~~------~~ 430 (467)
. ....++..|.|||.+.+..++.++|||||||++|||++|+.||......+ .. +... .. ..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 2 22346778999999999999999999999999999999999996431111 11 1111 11 12
Q ss_pred cccccccccccccccchhHHHHH
Q 041491 431 LPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 431 ~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
+++++.++|.+||..||.+|+++
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CCHHHHHHHHHHhcCCHhHcCCC
Confidence 34468999999999999999863
No 46
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.4e-42 Score=330.51 Aligned_cols=237 Identities=22% Similarity=0.302 Sum_probs=195.7
Q ss_pred hccCccCCccCcccceeEEEEEecCCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 468999999999999999999998899999999875432 234678899999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC--
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-- 372 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 372 (467)
|+++ +|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 9975 888888777677999999999999999999999 9999999999999999999999999999998765322
Q ss_pred ---ccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCcccccccc--------------------HHHHH-
Q 041491 373 ---SMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMN--------------------LKNWV- 427 (467)
Q Consensus 373 ---~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~--------------------~~~~~- 427 (467)
..++..|.+||...+ ..++.++||||+||++|||++|+.||......+.. +..|.
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhh
Confidence 245677899998765 56899999999999999999999999764322210 11111
Q ss_pred --------------hhhcccccccccccccccchhHHHHHHHHHH
Q 041491 428 --------------NDFLPISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 428 --------------~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
...+++++.+++.+||..||.+|++ +.|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~ell 299 (311)
T 3niz_A 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS-ARDAM 299 (311)
T ss_dssp CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCC-HHHHH
T ss_pred cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCC-HHHHh
Confidence 1123345778999999999999985 33433
No 47
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.4e-42 Score=337.22 Aligned_cols=235 Identities=21% Similarity=0.331 Sum_probs=198.8
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
..++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3578999999999999999999886 48999999997543 23446788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC---cEEEeccccceecC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM---VAHLSDFGIAKLLN 369 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~Dfg~a~~~~ 369 (467)
|||+++|+|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||++....
T Consensus 107 ~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTT-CSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 999999999998854 356899999999999999999999 99999999999999998654 59999999998776
Q ss_pred CCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH----------Hhhhccccc
Q 041491 370 GKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW----------VNDFLPISV 435 (467)
Q Consensus 370 ~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~----------~~~~~~~~~ 435 (467)
... ..++..|.+||...+..++.++|||||||++|||++|+.||.+....+. .... .+..+++++
T Consensus 183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~ 261 (362)
T 2bdw_A 183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-YAQIKAGAYDYPSPEWDTVTPEA 261 (362)
T ss_dssp TCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCTTGGGGSCHHH
T ss_pred CCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCCCCcccccCCCHHH
Confidence 433 3467789999999988999999999999999999999999976432211 1111 113445678
Q ss_pred ccccccccccchhHHHHHHH
Q 041491 436 MNVVDTSLLRREDKYFAAKK 455 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~~~~ 455 (467)
.++|.+||..||.+|+++.+
T Consensus 262 ~~li~~~L~~dP~~R~t~~e 281 (362)
T 2bdw_A 262 KSLIDSMLTVNPKKRITADQ 281 (362)
T ss_dssp HHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHcCCChhhCcCHHH
Confidence 99999999999999986543
No 48
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-42 Score=338.94 Aligned_cols=237 Identities=19% Similarity=0.266 Sum_probs=202.3
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 468999999999999999999886 4899999999866555556789999999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC--CCcEEEeccccceecCCCC-
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD--DMVAHLSDFGIAKLLNGKE- 372 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~- 372 (467)
+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999766668999999999999999999999 999999999999999974 4689999999999876543
Q ss_pred ---ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh----------hhccccccccc
Q 041491 373 ---SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN----------DFLPISVMNVV 439 (467)
Q Consensus 373 ---~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~----------~~~~~~~~~~i 439 (467)
..++..|.|||...+..++.++|||||||++|||+||+.||.+....+ .+..... ..+++++.++|
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li 285 (387)
T 1kob_A 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-TLQNVKRCDWEFDEDAFSSVSPEAKDFI 285 (387)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHCCCCCCSSTTTTSCHHHHHHH
T ss_pred eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCccccccCCHHHHHHH
Confidence 246778999999999999999999999999999999999997642211 1111111 23455689999
Q ss_pred ccccccchhHHHHHHHHHH
Q 041491 440 DTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 440 ~~~l~~~~~~r~~~~~~~~ 458 (467)
.+||..||.+|++ +.|++
T Consensus 286 ~~~L~~dP~~Rpt-~~ell 303 (387)
T 1kob_A 286 KNLLQKEPRKRLT-VHDAL 303 (387)
T ss_dssp HTTSCSSGGGSCC-HHHHH
T ss_pred HHHcCCChhHCcC-HHHHh
Confidence 9999999999985 33443
No 49
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.1e-42 Score=336.70 Aligned_cols=236 Identities=23% Similarity=0.314 Sum_probs=197.5
Q ss_pred HHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcC-CCCCceeEEEEeecCC
Q 041491 213 LLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGN 287 (467)
Q Consensus 213 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 287 (467)
.....++|++.+.||+|+||.||+|+++ +++.||+|+++... ....+.+..|..+++.+ +||||+++++++.+.+
T Consensus 12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~ 91 (345)
T 1xjd_A 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 91 (345)
T ss_dssp ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence 4556789999999999999999999986 48999999997642 23456678899999876 8999999999999999
Q ss_pred eeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 288 FEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
..|+||||++||+|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 999999999999999998653 46899999999999999999999 99999999999999999999999999999986
Q ss_pred cCC-----CCccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH------hhhcccccc
Q 041491 368 LNG-----KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV------NDFLPISVM 436 (467)
Q Consensus 368 ~~~-----~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~ 436 (467)
... ....++..|.|||...+..++.++||||+||++|||++|+.||......+. ..... ...+++++.
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~p~~~s~~~~ 246 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL-FHSIRMDNPFYPRWLEKEAK 246 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCTTSCHHHH
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH-HHHHHhCCCCCCcccCHHHH
Confidence 432 223467789999999999999999999999999999999999976432221 11111 122445689
Q ss_pred cccccccccchhHHHHH
Q 041491 437 NVVDTSLLRREDKYFAA 453 (467)
Q Consensus 437 ~~i~~~l~~~~~~r~~~ 453 (467)
+++.+||..||.+|++.
T Consensus 247 ~li~~lL~~dp~~R~~~ 263 (345)
T 1xjd_A 247 DLLVKLFVREPEKRLGV 263 (345)
T ss_dssp HHHHHHSCSSGGGSBTT
T ss_pred HHHHHHhcCCHhHcCCC
Confidence 99999999999999864
No 50
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.6e-42 Score=333.46 Aligned_cols=232 Identities=21% Similarity=0.298 Sum_probs=196.4
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 368999999999999999999987 589999999875432 234678899999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC---
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK--- 371 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 371 (467)
|+++|+|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.+...
T Consensus 86 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999998853 456999999999999999999999 999999999999999999999999999999865422
Q ss_pred ----CccccccccccccccCCCC-CCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh--------hhcccccccc
Q 041491 372 ----ESMRTQTLATIEYGREGQV-SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN--------DFLPISVMNV 438 (467)
Q Consensus 372 ----~~~~~~~~~~pe~~~~~~~-~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~~~ 438 (467)
...++..|.+||...+..+ +.++|||||||++|||++|+.||............|.. ..+++.+.++
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHH
Confidence 2346777899999877665 77899999999999999999999875444444444432 2345568899
Q ss_pred cccccccchhHHHH
Q 041491 439 VDTSLLRREDKYFA 452 (467)
Q Consensus 439 i~~~l~~~~~~r~~ 452 (467)
+.+||..||.+|++
T Consensus 242 i~~~L~~dP~~R~t 255 (323)
T 3tki_A 242 LHKILVENPSARIT 255 (323)
T ss_dssp HHHHSCSSTTTSCC
T ss_pred HHHHccCChhhCcC
Confidence 99999999999985
No 51
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.5e-42 Score=337.57 Aligned_cols=233 Identities=20% Similarity=0.268 Sum_probs=197.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-----ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-----DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 468999999999999999999886 58999999986432 123577899999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc---EEEecccc
Q 041491 291 LVLEYMANGSLEKCLYSS---NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV---AHLSDFGI 364 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg~ 364 (467)
+||||+++++|.+.+... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999998877542 235899999999999999999999 999999999999999986654 99999999
Q ss_pred ceecCCCC-----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH----------Hhh
Q 041491 365 AKLLNGKE-----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW----------VND 429 (467)
Q Consensus 365 a~~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~----------~~~ 429 (467)
+....... ..++..|.+||.+.+..++.++||||+||++|||++|+.||.+.... ..... .+.
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~i~~~~~~~~~~~~~ 257 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER--LFEGIIKGKYKMNPRQWS 257 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH--HHHHHHHTCCCCCHHHHT
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH--HHHHHHcCCCCCCccccc
Confidence 98876533 34677899999999899999999999999999999999999764221 11111 223
Q ss_pred hcccccccccccccccchhHHHHHH
Q 041491 430 FLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 430 ~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
.+++.+.+++.+||..||.+|++..
T Consensus 258 ~~s~~~~~li~~~L~~dP~~R~s~~ 282 (351)
T 3c0i_A 258 HISESAKDLVRRMLMLDPAERITVY 282 (351)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHH
Confidence 4566799999999999999998544
No 52
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=9.1e-43 Score=338.36 Aligned_cols=234 Identities=19% Similarity=0.226 Sum_probs=197.7
Q ss_pred HHHhccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCe
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNF 288 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 288 (467)
....++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+..|..++..+ +||+|+++++++.+.+.
T Consensus 16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 3456789999999999999999999875 8899999997642 23456788999999988 79999999999999999
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.|+||||++||+|.+++... +.+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 99999999999999998643 46899999999999999999999 999999999999999999999999999999864
Q ss_pred CC-----CCccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhccccccc
Q 041491 369 NG-----KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMN 437 (467)
Q Consensus 369 ~~-----~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~ 437 (467)
.. ....++..|.|||.+.+..++.++|||||||++|||++|+.||......+ ....... ..+++++.+
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~ 250 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIMEHNVAYPKSMSKEAVA 250 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCTTSCHHHHH
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH-HHHHHHhCCCCCCCCCCHHHHH
Confidence 32 22346778999999998999999999999999999999999997643222 1122221 234556899
Q ss_pred ccccccccchhHHHH
Q 041491 438 VVDTSLLRREDKYFA 452 (467)
Q Consensus 438 ~i~~~l~~~~~~r~~ 452 (467)
++.+||..||.+|+.
T Consensus 251 li~~lL~~dP~~R~~ 265 (353)
T 2i0e_A 251 ICKGLMTKHPGKRLG 265 (353)
T ss_dssp HHHHHTCSCTTSCTT
T ss_pred HHHHHhhcCHHHcCC
Confidence 999999999999985
No 53
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=8.9e-43 Score=342.45 Aligned_cols=246 Identities=24% Similarity=0.371 Sum_probs=206.3
Q ss_pred HHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 213 LLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 213 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
+.+..++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 188 (377)
T 3cbl_A 109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY 188 (377)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred cEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE
Confidence 3455678999999999999999999987 589999999875432 23457889999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
+||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 189 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 999999999999999766667999999999999999999999 99999999999999999999999999999987554
Q ss_pred CCc-------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhcccc
Q 041491 371 KES-------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPIS 434 (467)
Q Consensus 371 ~~~-------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~ 434 (467)
... ..+..|.|||.+..+.++.++|||||||++|||+| |+.||......+ ....+. ...|+.
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 343 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TREFVEKGGRLPCPELCPDA 343 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHHHHHTTCCCCCCTTCCHH
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCCCCCCCCHH
Confidence 321 23456899999988889999999999999999998 999997643222 222222 224456
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
+.+++.+|+..||++|+ ++.++++.|.++
T Consensus 344 l~~li~~cl~~dP~~Rp-s~~~i~~~L~~i 372 (377)
T 3cbl_A 344 VFRLMEQCWAYEPGQRP-SFSTIYQELQSI 372 (377)
T ss_dssp HHHHHHHHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCchhCc-CHHHHHHHHHHH
Confidence 88999999999999996 566666666543
No 54
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.8e-42 Score=339.46 Aligned_cols=242 Identities=23% Similarity=0.406 Sum_probs=193.8
Q ss_pred HhccCccCCccCcccceeEEEEEec----CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
..++|++.+.||+|+||.||+|++. ++..||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 3468999999999999999999875 47789999997653 234567899999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
+||||+++|+|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 123 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 999999999999999877678999999999999999999999 99999999999999999999999999999987654
Q ss_pred CCc--------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHhh--------hccc
Q 041491 371 KES--------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVND--------FLPI 433 (467)
Q Consensus 371 ~~~--------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~--------~~~~ 433 (467)
... ..+..|.+||+..+..++.++|||||||++|||++ |+.||......+ ....+.. ..+.
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--~~~~i~~~~~~~~~~~~~~ 277 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--VIKAVDEGYRLPPPMDCPA 277 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--HHHHHHTTEECCCCTTCBH
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCCCCccccH
Confidence 321 12346899999998999999999999999999998 999997643222 2222221 2344
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 434 SVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 434 ~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
.+.+++.+|+..+|.+|+ ++.+++..|.+
T Consensus 278 ~l~~li~~cl~~dp~~RP-s~~~i~~~L~~ 306 (373)
T 2qol_A 278 ALYQLMLDCWQKDRNNRP-KFEQIVSILDK 306 (373)
T ss_dssp HHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred HHHHHHHHHhCcChhhCc-CHHHHHHHHHH
Confidence 588999999999999996 55566655543
No 55
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=7e-43 Score=331.71 Aligned_cols=245 Identities=24% Similarity=0.361 Sum_probs=200.7
Q ss_pred HhccCccCCccCcccceeEEEEEec-----CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecC--Ce
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNG--NF 288 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 288 (467)
..++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++... ..
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 4578999999999999999999842 4889999999876656667899999999999999999999998643 56
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.++||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred eEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 89999999999999999877667999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCC--------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc--------------cHHHH
Q 041491 369 NGKE--------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM--------------NLKNW 426 (467)
Q Consensus 369 ~~~~--------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~--------------~~~~~ 426 (467)
.... ..++..|.+||...+..++.++||||||+++|||+||..||.....+.. .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence 5332 1234458999999989999999999999999999999999875321100 01111
Q ss_pred H--------hhhcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 427 V--------NDFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 427 ~--------~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
. ...+++++.+++.+|+..+|.+|+ ++.|++..|.++
T Consensus 245 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~el~~~L~~l 289 (295)
T 3ugc_A 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP-SFRDLALRVDQI 289 (295)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSC-CHHHHHHHHHHH
T ss_pred HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCC-CHHHHHHHHHHH
Confidence 1 123455689999999999999996 566776666554
No 56
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.1e-42 Score=327.28 Aligned_cols=231 Identities=22% Similarity=0.304 Sum_probs=193.1
Q ss_pred ccCccCCccCcccceeEEEEEecCCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
++|++.+.||+|+||.||+|++.+++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57999999999999999999997799999999965432 2346788999999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC----
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK---- 371 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 371 (467)
+++ +|.+++....+.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 976 999988776678999999999999999999999 999999999999999999999999999999876532
Q ss_pred -CccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh---------------------
Q 041491 372 -ESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN--------------------- 428 (467)
Q Consensus 372 -~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~--------------------- 428 (467)
...++..|.|||...+ ..++.++||||+||++|||+||+.||......+. +.....
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIFRILGTPNSKNWPNVTELPKYDP 236 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHHCCCChhhchhhhccccccc
Confidence 2245677899998865 4589999999999999999999999976432221 111110
Q ss_pred --------------hhcccccccccccccccchhHHHHH
Q 041491 429 --------------DFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 429 --------------~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
..+++.+.+++.+||..||.+|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 275 (288)
T 1ob3_A 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITA 275 (288)
T ss_dssp TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCH
Confidence 1133446789999999999999854
No 57
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.3e-42 Score=324.22 Aligned_cols=236 Identities=23% Similarity=0.287 Sum_probs=193.7
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
++|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999986 489999999975532 234678899999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC--
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-- 372 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 372 (467)
|+++ ++.+.+....+.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 9976 666666666678999999999999999999999 9999999999999999999999999999998765332
Q ss_pred ---ccccccccccccccCCC-CCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh--------------------
Q 041491 373 ---SMRTQTLATIEYGREGQ-VSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN-------------------- 428 (467)
Q Consensus 373 ---~~~~~~~~~pe~~~~~~-~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~-------------------- 428 (467)
..++..|.+||...+.. ++.++||||+||++|||++|..||.........+.....
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 24567789999887655 799999999999999999998886433222212222211
Q ss_pred ---------------hhcccccccccccccccchhHHHHHHHHHH
Q 041491 429 ---------------DFLPISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 429 ---------------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
..+++.+.+++.+||..||.+|++ +.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-~~e~l 281 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS-AEEAL 281 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC-HHHHH
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCC-HHHHh
Confidence 113344679999999999999985 34433
No 58
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2e-42 Score=332.81 Aligned_cols=242 Identities=21% Similarity=0.271 Sum_probs=195.0
Q ss_pred HHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCC----eee
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN----FEA 290 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~ 290 (467)
...++|++.+.||+|+||.||+|++. ++.||+|++.... .......+|+.++++++||||+++++++.... ..+
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 45678999999999999999999875 7999999997553 23345667899999999999999999998744 469
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CceecCCCCCCeeecCCCcEEEe
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN----------PVVHCDIKPSNVLLDDDMVAHLS 360 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~----------~ivH~dlkp~NIll~~~~~~kl~ 360 (467)
+||||+++|+|.+++... .+++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||+
T Consensus 99 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 999999999999999653 4899999999999999999999 88 99999999999999999999999
Q ss_pred ccccceecCCCC-------ccccccccccccccC-----CCCCCcccchhhHHHHHHHhcCCCCCCcccccc--------
Q 041491 361 DFGIAKLLNGKE-------SMRTQTLATIEYGRE-----GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE-------- 420 (467)
Q Consensus 361 Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~-----~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~-------- 420 (467)
|||+++...... ..++..|.+||...+ ..++.++|||||||++|||+||+.||.......
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 999998765432 245777899998876 345678899999999999999999997542221
Q ss_pred ---ccHHHHHhhh-----------------cccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 421 ---MNLKNWVNDF-----------------LPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 421 ---~~~~~~~~~~-----------------~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
.....+.... .++.+.+++.+||..||.+|+ ++.|+++.|.++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~ell~~L~~l 316 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARL-SAGCVGERITQM 316 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCc-CHHHHHHHHHHH
Confidence 1122221111 011277899999999999997 566666666544
No 59
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=9.5e-43 Score=340.22 Aligned_cols=253 Identities=19% Similarity=0.291 Sum_probs=207.2
Q ss_pred cccHHHHHHHhccCccCCccCcccceeEEEEEec------CCCeEEEEEeecccc-cchHHHHHHHHHHHcC-CCCCcee
Q 041491 207 RFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFD-GALKSFDAECEVLKSV-RHRNLVK 278 (467)
Q Consensus 207 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~ 278 (467)
.+...++.+..++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 3456777888999999999999999999999842 367899999976432 3446789999999999 7899999
Q ss_pred EEEEeecCC-eeeEEEecccCCCHHHhhhcCCC-----------------------------------------------
Q 041491 279 IISSCSNGN-FEALVLEYMANGSLEKCLYSSNG----------------------------------------------- 310 (467)
Q Consensus 279 ~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------- 310 (467)
+++++.+.+ ..++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999988755 48999999999999999876432
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 311 ------------------ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 311 ------------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
.+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 1889999999999999999999 9999999999999999999999999999998764322
Q ss_pred -------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh-------hhccccccc
Q 041491 373 -------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN-------DFLPISVMN 437 (467)
Q Consensus 373 -------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~ 437 (467)
..++..|.+||...+..++.++|||||||++|||+| |+.||......+........ ..+++++.+
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 327 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 327 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHH
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 234556899999988999999999999999999998 99999764433222222211 123456899
Q ss_pred ccccccccchhHHHHHHHHHHHHHHh
Q 041491 438 VVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 438 ~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
++.+||..||.+|+ ++.|+++.|.+
T Consensus 328 li~~~l~~dP~~Rp-s~~ell~~L~~ 352 (359)
T 3vhe_A 328 TMLDCWHGEPSQRP-TFSELVEHLGN 352 (359)
T ss_dssp HHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred HHHHHccCChhhCC-CHHHHHHHHHH
Confidence 99999999999997 56666666544
No 60
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.5e-42 Score=343.16 Aligned_cols=234 Identities=19% Similarity=0.248 Sum_probs=197.3
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
..++|++.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4578999999999999999999876 58999999997553 22346788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeec---CCCcEEEeccccceecC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLD---DDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~ 369 (467)
|||+++|+|.+.+... +.+++..+..++.|++.||+||| ++||+||||||+||+++ .++.+||+|||++....
T Consensus 89 ~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 9999999999988654 56899999999999999999999 99999999999999998 46789999999998776
Q ss_pred CCC-----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH----------hhhcccc
Q 041491 370 GKE-----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV----------NDFLPIS 434 (467)
Q Consensus 370 ~~~-----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~----------~~~~~~~ 434 (467)
... ..++..|.|||.+.+..++.++||||+||++|+|++|+.||.+....+ ...... +..++++
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~ 243 (444)
T 3soa_A 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-LYQQIKAGAYDFPSPEWDTVTPE 243 (444)
T ss_dssp TTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCCCTTTTTTSCHH
T ss_pred CCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhCCCCCCccccccCCHH
Confidence 432 346778999999998899999999999999999999999997643221 111111 1234566
Q ss_pred cccccccccccchhHHHHHH
Q 041491 435 VMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~ 454 (467)
+.+++.+||..||.+|+++.
T Consensus 244 ~~~li~~~L~~dP~~Rpta~ 263 (444)
T 3soa_A 244 AKDLINKMLTINPSKRITAA 263 (444)
T ss_dssp HHHHHHHHSCSSTTTSCCHH
T ss_pred HHHHHHHHcCCChhHCCCHH
Confidence 99999999999999998644
No 61
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.3e-42 Score=333.89 Aligned_cols=233 Identities=23% Similarity=0.321 Sum_probs=185.5
Q ss_pred HhccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
..++|++.+.||+|+||.||+|++.. ++.||+|+++... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 35689999999999999999999874 8899999997543 34668899999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC---CCcEEEeccccceecCCC
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD---DMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a~~~~~~ 371 (467)
|+++++|.+++.. .+.+++.++..++.|++.||.||| ++||+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVE-KGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTT-CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 9999999998854 456899999999999999999999 999999999999999975 889999999999876543
Q ss_pred C----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh----------hhccccccc
Q 041491 372 E----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN----------DFLPISVMN 437 (467)
Q Consensus 372 ~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~----------~~~~~~~~~ 437 (467)
. ..++..|.+||+..+..++.++|||||||++|||++|+.||.........+..... ..++..+.+
T Consensus 205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 284 (349)
T 2w4o_A 205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKD 284 (349)
T ss_dssp --------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHH
T ss_pred cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHH
Confidence 2 34677899999999999999999999999999999999999764433322223222 234456889
Q ss_pred ccccccccchhHHHHHH
Q 041491 438 VVDTSLLRREDKYFAAK 454 (467)
Q Consensus 438 ~i~~~l~~~~~~r~~~~ 454 (467)
++.+||..||++|++..
T Consensus 285 li~~~L~~dP~~Rpt~~ 301 (349)
T 2w4o_A 285 LVRKLIVLDPKKRLTTF 301 (349)
T ss_dssp HHHTTSCSSGGGSCCHH
T ss_pred HHHHHccCChhhCcCHH
Confidence 99999999999998644
No 62
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1e-42 Score=340.74 Aligned_cols=242 Identities=16% Similarity=0.146 Sum_probs=197.4
Q ss_pred HHHhccCccCCccCcccceeEEEEE------ecCCCeEEEEEeecccccchHHHHHHHHHHHcCC---CCCceeEEEEee
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGR------FLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR---HRNLVKIISSCS 284 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~ 284 (467)
....++|.+.+.||+|+||.||+|. ..+++.||+|+++.. ....+..|+++++.++ |+||+++++++.
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 3456789999999999999999994 335899999998744 3456788888888886 999999999999
Q ss_pred cCCeeeEEEecccCCCHHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC-------
Q 041491 285 NGNFEALVLEYMANGSLEKCLYS----SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD------- 353 (467)
Q Consensus 285 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~------- 353 (467)
..+..++||||+++|+|.+++.. ....+++..++.++.|++.||+||| ++||+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccc
Confidence 99999999999999999999864 3457999999999999999999999 999999999999999998
Q ss_pred ----CCcEEEeccccceecCC-------CCccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccccc
Q 041491 354 ----DMVAHLSDFGIAKLLNG-------KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMN 422 (467)
Q Consensus 354 ----~~~~kl~Dfg~a~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~ 422 (467)
++.+||+|||+|+.+.. ....++..|.|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 294 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK 294 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee
Confidence 89999999999976531 1234677899999999999999999999999999999999999654332221
Q ss_pred HHHHHhhh-cccccccccccccccchhHHHHHHHHHHHHH
Q 041491 423 LKNWVNDF-LPISVMNVVDTSLLRREDKYFAAKKQCVSSA 461 (467)
Q Consensus 423 ~~~~~~~~-~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l 461 (467)
........ .++.+.++++.+|..+|.+|+++++++.+.|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l 334 (365)
T 3e7e_A 295 PEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334 (365)
T ss_dssp ECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred echhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence 11111111 1234888999999999999966655544433
No 63
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.1e-42 Score=333.15 Aligned_cols=233 Identities=22% Similarity=0.261 Sum_probs=195.3
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 291 (467)
.++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 4689999999999999999999864 8899999997653 22345678999999988 89999999999999999999
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 371 (467)
||||+++|+|.+++... +.+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999988643 46899999999999999999999 999999999999999999999999999999864322
Q ss_pred -----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc----c---cH-HHHHh------hhcc
Q 041491 372 -----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE----M---NL-KNWVN------DFLP 432 (467)
Q Consensus 372 -----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~----~---~~-~~~~~------~~~~ 432 (467)
...++..|.|||.+.+..++.++||||+||++|||++|+.||......+ . .+ ..... ..++
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s 243 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS 243 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSC
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCC
Confidence 2346778999999999999999999999999999999999996421110 0 01 11111 2234
Q ss_pred cccccccccccccchhHHHHH
Q 041491 433 ISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 433 ~~~~~~i~~~l~~~~~~r~~~ 453 (467)
..+.+++.+||..||.+|+++
T Consensus 244 ~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 244 VKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHHHHHHHTCSSTTTSTTC
T ss_pred HHHHHHHHHHhcCCHhHCCCC
Confidence 568899999999999999864
No 64
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.8e-42 Score=342.26 Aligned_cols=241 Identities=21% Similarity=0.255 Sum_probs=199.6
Q ss_pred HHHHHHHhccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeec
Q 041491 210 YQELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSN 285 (467)
Q Consensus 210 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 285 (467)
..++....++|++.+.||+|+||.||+|++.. ++.||+|+++... ......+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 44566677899999999999999999999874 8899999997532 2234568899999999999999999999999
Q ss_pred CCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccc
Q 041491 286 GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365 (467)
Q Consensus 286 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 365 (467)
.+..|+||||++||+|.+++... .+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+|
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEecccee
Confidence 99999999999999999998653 5899999999999999999999 999999999999999999999999999999
Q ss_pred eecCCC------CccccccccccccccCCC----CCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh-------
Q 041491 366 KLLNGK------ESMRTQTLATIEYGREGQ----VSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------- 428 (467)
Q Consensus 366 ~~~~~~------~~~~~~~~~~pe~~~~~~----~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------- 428 (467)
+..... ...++..|.|||++.... ++.++|||||||++|||+||+.||......+. +.....
T Consensus 216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-~~~i~~~~~~~~~ 294 (410)
T 3v8s_A 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-YSKIMNHKNSLTF 294 (410)
T ss_dssp EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHHCCC
T ss_pred EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-HHHHHhccccccC
Confidence 877643 234677889999876654 78999999999999999999999976432221 112211
Q ss_pred ---hhcccccccccccccccchhH--HHHHHHHH
Q 041491 429 ---DFLPISVMNVVDTSLLRREDK--YFAAKKQC 457 (467)
Q Consensus 429 ---~~~~~~~~~~i~~~l~~~~~~--r~~~~~~~ 457 (467)
..+++++.++|.+||..+|.+ |+ +++|+
T Consensus 295 p~~~~~s~~~~~li~~lL~~~~~rlgR~-~~~ei 327 (410)
T 3v8s_A 295 PDDNDISKEAKNLICAFLTDREVRLGRN-GVEEI 327 (410)
T ss_dssp CTTCCCCHHHHHHHHHHSSCGGGCTTSS-CHHHH
T ss_pred CCcccccHHHHHHHHHHccChhhhCCCC-CHHHH
Confidence 124456899999999977766 64 44443
No 65
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.3e-41 Score=321.73 Aligned_cols=243 Identities=25% Similarity=0.357 Sum_probs=201.9
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccccc-------chHHHHHHHHHHHcCCCCCceeEEEEeecCC
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG-------ALKSFDAECEVLKSVRHRNLVKIISSCSNGN 287 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 287 (467)
..++|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3578999999999999999999985 5899999998654322 1267889999999999999999999997765
Q ss_pred eeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeecCCCc-----EEEe
Q 041491 288 FEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNVLLDDDMV-----AHLS 360 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlkp~NIll~~~~~-----~kl~ 360 (467)
++||||+++|+|.+++......+++..+..++.|++.||+||| ++| |+||||||+||+++.++. +||+
T Consensus 97 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred --eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 6999999999999998777778999999999999999999999 999 999999999999988776 9999
Q ss_pred ccccceecCCCC--ccccccccccccc--cCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh--------
Q 041491 361 DFGIAKLLNGKE--SMRTQTLATIEYG--REGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN-------- 428 (467)
Q Consensus 361 Dfg~a~~~~~~~--~~~~~~~~~pe~~--~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~-------- 428 (467)
|||+++...... ..++..|.+||.. ....++.++||||+||++|||++|+.||...............
T Consensus 172 Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 251 (287)
T 4f0f_A 172 DFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251 (287)
T ss_dssp CCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCC
T ss_pred CCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCC
Confidence 999998655432 3456778999988 3456788999999999999999999999865443332222221
Q ss_pred -hhcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 429 -DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 429 -~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
..+++.+.+++.+||..||.+|+ ++.++++.|.++
T Consensus 252 ~~~~~~~l~~li~~~l~~dp~~Rp-s~~~ll~~L~~l 287 (287)
T 4f0f_A 252 PEDCPPRLRNVIELCWSGDPKKRP-HFSYIVKELSEL 287 (287)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHTC
T ss_pred CcccCHHHHHHHHHHhcCChhhCc-CHHHHHHHHHhC
Confidence 23445689999999999999997 677788777553
No 66
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4e-42 Score=331.23 Aligned_cols=232 Identities=22% Similarity=0.311 Sum_probs=188.7
Q ss_pred HhccCccCCccCcccceeEEEEEec----CCCeEEEEEeeccc----ccchHHHHHHHHHHHcCCCCCceeEEEEeecCC
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF----DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN 287 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 287 (467)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.++++++||||+++++++...+
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 4578999999999999999999873 68999999997542 223456788999999999999999999999999
Q ss_pred eeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 288 FEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
..++||||+++++|.+++... +.+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999998643 46899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCC-----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhcccccc
Q 041491 368 LNGK-----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVM 436 (467)
Q Consensus 368 ~~~~-----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~ 436 (467)
.... ...++..|.+||...+..++.++|||||||++|||++|+.||......+ ....... ..+++.+.
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~ 249 (327)
T 3a62_A 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-TIDKILKCKLNLPPYLTQEAR 249 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCCCTTSCHHHH
T ss_pred cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCCCCCCCHHHH
Confidence 4322 2346778999999988899999999999999999999999997643222 1111211 23445689
Q ss_pred cccccccccchhHHHH
Q 041491 437 NVVDTSLLRREDKYFA 452 (467)
Q Consensus 437 ~~i~~~l~~~~~~r~~ 452 (467)
+++.+||..+|.+|++
T Consensus 250 ~li~~~L~~dp~~R~~ 265 (327)
T 3a62_A 250 DLLKKLLKRNAASRLG 265 (327)
T ss_dssp HHHHHHSCSCGGGSTT
T ss_pred HHHHHHHhcCHhhccC
Confidence 9999999999999984
No 67
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.9e-42 Score=321.50 Aligned_cols=243 Identities=18% Similarity=0.315 Sum_probs=205.0
Q ss_pred hccCccCCccCcccceeEEEEEecCCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecC--CeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNG--NFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 292 (467)
.++|++.+.||+|+||.||+|++ +++.||+|+++... ....+.+.+|+.++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 46899999999999999999998 48899999997653 23456789999999999999999999999877 788999
Q ss_pred EecccCCCHHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 293 LEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
|||+++|+|.+++..... .+++..+..++.|++.||+||| +++ ++||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999976544 5899999999999999999999 889 9999999999999999999999999988777
Q ss_pred CCCccccccccccccccCCCCCC---cccchhhHHHHHHHhcCCCCCCccccccccHHHHH-------hhhccccccccc
Q 041491 370 GKESMRTQTLATIEYGREGQVSP---KSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV-------NDFLPISVMNVV 439 (467)
Q Consensus 370 ~~~~~~~~~~~~pe~~~~~~~~~---~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~-------~~~~~~~~~~~i 439 (467)
.....++..|.+||...+..++. ++||||||+++|||+||+.||......+....... ...+++.+.+++
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 244 (271)
T 3kmu_A 165 SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLM 244 (271)
T ss_dssp CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHH
T ss_pred ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence 77777888999999987665544 79999999999999999999976433322111111 123455689999
Q ss_pred ccccccchhHHHHHHHHHHHHHHhc
Q 041491 440 DTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 440 ~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
.+||..||.+|+ ++.++++.|.++
T Consensus 245 ~~~l~~~p~~Rp-s~~~il~~L~~l 268 (271)
T 3kmu_A 245 KICMNEDPAKRP-KFDMIVPILEKM 268 (271)
T ss_dssp HHHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHHcCCChhhCc-CHHHHHHHHHHh
Confidence 999999999997 567777776654
No 68
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=6.1e-42 Score=335.55 Aligned_cols=232 Identities=21% Similarity=0.302 Sum_probs=193.0
Q ss_pred cCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEecccCCC
Q 041491 222 EKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMANGS 300 (467)
Q Consensus 222 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~ 300 (467)
..+.||+|+||.||+|.+. +|+.||+|+++.......+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 3578999999999999885 589999999987655566789999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee--cCCCcEEEeccccceecCCCC----cc
Q 041491 301 LEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL--DDDMVAHLSDFGIAKLLNGKE----SM 374 (467)
Q Consensus 301 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll--~~~~~~kl~Dfg~a~~~~~~~----~~ 374 (467)
|.+++......+++..+..++.|++.||+||| ++||+||||||+||++ ++++.+||+|||+++...... ..
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 249 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence 99988766667999999999999999999999 9999999999999999 567899999999999876433 23
Q ss_pred ccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh----------hhcccccccccccccc
Q 041491 375 RTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN----------DFLPISVMNVVDTSLL 444 (467)
Q Consensus 375 ~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~~l~ 444 (467)
++..|.+||+...+.++.++|||||||++|||++|+.||......+ .+..... ..+++++.+++.+||.
T Consensus 250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~ 328 (373)
T 2x4f_A 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-TLNNILACRWDLEDEEFQDISEEAKEFISKLLI 328 (373)
T ss_dssp SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSC
T ss_pred CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCCCChhhhccCCHHHHHHHHHHcC
Confidence 6778999999988899999999999999999999999997643221 1222222 2345668999999999
Q ss_pred cchhHHHHHHHHHH
Q 041491 445 RREDKYFAAKKQCV 458 (467)
Q Consensus 445 ~~~~~r~~~~~~~~ 458 (467)
.||.+|++. .|++
T Consensus 329 ~dp~~Rps~-~e~l 341 (373)
T 2x4f_A 329 KEKSWRISA-SEAL 341 (373)
T ss_dssp SSGGGSCCH-HHHH
T ss_pred CChhhCCCH-HHHh
Confidence 999999853 4443
No 69
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.8e-42 Score=326.53 Aligned_cols=244 Identities=21% Similarity=0.306 Sum_probs=202.7
Q ss_pred hccCccCCccCcccceeEEEEEecC-C-------CeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-G-------MEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNF 288 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 288 (467)
.++|++.+.||+|+||.||+|.+.. + ..||+|++........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 5689999999999999999998764 3 4699999977666667889999999999999999999999999999
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc--------EEEe
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV--------AHLS 360 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~--------~kl~ 360 (467)
.++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999876666999999999999999999999 999999999999999998886 9999
Q ss_pred ccccceecCCCC-ccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH-----hhhccc
Q 041491 361 DFGIAKLLNGKE-SMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV-----NDFLPI 433 (467)
Q Consensus 361 Dfg~a~~~~~~~-~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~-----~~~~~~ 433 (467)
|||++....... ..++..|.+||...+ ..++.++||||||+++|||++|..|+............+. ....++
T Consensus 164 Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
T 4fvq_A 164 DPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAA 243 (289)
T ss_dssp CCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCSSC
T ss_pred cCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCCCCH
Confidence 999997664432 235667899998877 7789999999999999999996555443222211111111 122345
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 434 SVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 434 ~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
++.+++.+||..||.+|+ ++.++++.|.++
T Consensus 244 ~l~~li~~~l~~dp~~Rp-s~~~ll~~l~~l 273 (289)
T 4fvq_A 244 ELANLINNCMDYEPDHRP-SFRAIIRDLNSL 273 (289)
T ss_dssp TTHHHHHHHSCSSGGGSC-CHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCChhHCc-CHHHHHHHHHHh
Confidence 699999999999999995 677888777654
No 70
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.5e-42 Score=321.89 Aligned_cols=242 Identities=24% Similarity=0.353 Sum_probs=205.6
Q ss_pred HhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
..++|++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 4578999999999999999999998889999999976532 346789999999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC----
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK---- 371 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---- 371 (467)
+++++|.+++......+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 161 (267)
T 3t9t_A 85 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 161 (267)
T ss_dssp CTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence 9999999999877778999999999999999999999 999999999999999999999999999999876432
Q ss_pred --CccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhcccccccccc
Q 041491 372 --ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPISVMNVVD 440 (467)
Q Consensus 372 --~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~~~i~ 440 (467)
....+..|.+||...+..++.++||||+|+++|||++ |+.||......+ ....+. ...++.+.+++.
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~i~~~~~~~~~~~~~~~l~~li~ 239 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFRLYKPRLASTHVYQIMN 239 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HHHHHhcCCcCCCCccCcHHHHHHHH
Confidence 2234456899999988889999999999999999999 899997643221 111111 123445889999
Q ss_pred cccccchhHHHHHHHHHHHHHHhc
Q 041491 441 TSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 441 ~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
+|+..+|.+|+ ++.++++.|.++
T Consensus 240 ~~l~~~p~~Rp-s~~~ll~~L~~l 262 (267)
T 3t9t_A 240 HCWRERPEDRP-AFSRLLRQLAEI 262 (267)
T ss_dssp HHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHccCChhhCc-CHHHHHHHHHHH
Confidence 99999999996 566666666554
No 71
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=326.96 Aligned_cols=241 Identities=24% Similarity=0.328 Sum_probs=196.8
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCC--eeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN--FEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 292 (467)
.++|++.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 4689999999999999999999875 8999999997543 234567889999999999999999999987655 77999
Q ss_pred EecccCCCHHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee----cCCCcEEEeccccce
Q 041491 293 LEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL----DDDMVAHLSDFGIAK 366 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~a~ 366 (467)
|||+++++|.+++..... .+++.+++.++.|++.||+||| ++||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999965433 3899999999999999999999 9999999999999999 778889999999999
Q ss_pred ecCCCC----cccccccccccccc--------CCCCCCcccchhhHHHHHHHhcCCCCCCcccccccc---HHHHHh---
Q 041491 367 LLNGKE----SMRTQTLATIEYGR--------EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMN---LKNWVN--- 428 (467)
Q Consensus 367 ~~~~~~----~~~~~~~~~pe~~~--------~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~---~~~~~~--- 428 (467)
...... ..++..|.+||... +..++.++|||||||++|||+||+.||......... +.....
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred ecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 876543 24567889999875 577899999999999999999999999643222111 111111
Q ss_pred ----------------------------hhcccccccccccccccchhHHHHHHHHHHHHH
Q 041491 429 ----------------------------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSA 461 (467)
Q Consensus 429 ----------------------------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l 461 (467)
..++..+.+++.+||..||.+|++ ++|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s-~~ell~h~ 304 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWG-FDQFFAET 304 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCC-HHHHHHHH
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhcc-HHHhhhcc
Confidence 112235778999999999999974 55655543
No 72
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-42 Score=333.20 Aligned_cols=233 Identities=22% Similarity=0.354 Sum_probs=195.6
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|.+.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 368999999999999999999985 58999999997542 22346789999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+ +|+|.+++... +.+++.++..++.|++.||+||| ++||+||||||+||++++++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 67898888543 46899999999999999999999 9999999999999999999999999999998765432
Q ss_pred ----ccccccccccccccCCCC-CCcccchhhHHHHHHHhcCCCCCCcccccccc-----HHHHHhhhcccccccccccc
Q 041491 373 ----SMRTQTLATIEYGREGQV-SPKSDVYGYGITLIETFTKKKPTCEIFCEEMN-----LKNWVNDFLPISVMNVVDTS 442 (467)
Q Consensus 373 ----~~~~~~~~~pe~~~~~~~-~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~ 442 (467)
..++..|.|||...+..+ ++++||||+||++|||++|+.||.+....... ........+++.+.+++.+|
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~ 242 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRM 242 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHHHHTT
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHHHHHH
Confidence 346778899999887776 78999999999999999999999764322110 00011234566789999999
Q ss_pred cccchhHHHHHH
Q 041491 443 LLRREDKYFAAK 454 (467)
Q Consensus 443 l~~~~~~r~~~~ 454 (467)
|..||.+|++..
T Consensus 243 L~~dP~~Rpt~~ 254 (336)
T 3h4j_B 243 IVADPMQRITIQ 254 (336)
T ss_dssp SCSSGGGSCCHH
T ss_pred cCCChhHCcCHH
Confidence 999999998543
No 73
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=7.9e-42 Score=329.80 Aligned_cols=228 Identities=20% Similarity=0.248 Sum_probs=194.4
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 294 (467)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ..+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 468999999999999999999975 58999999987543 235688999999999 99999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc-----EEEeccccceecC
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV-----AHLSDFGIAKLLN 369 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~-----~kl~Dfg~a~~~~ 369 (467)
|+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+++...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 99999999876678999999999999999999999 999999999999999998887 9999999998764
Q ss_pred CC------------CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc--cHHHH---------
Q 041491 370 GK------------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM--NLKNW--------- 426 (467)
Q Consensus 370 ~~------------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~--~~~~~--------- 426 (467)
.. ...++..|.+||...+..++.++|||||||++|||++|+.||.+...... .+...
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 241 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI 241 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence 32 23467788999999999999999999999999999999999986432221 11111
Q ss_pred --HhhhcccccccccccccccchhHHH
Q 041491 427 --VNDFLPISVMNVVDTSLLRREDKYF 451 (467)
Q Consensus 427 --~~~~~~~~~~~~i~~~l~~~~~~r~ 451 (467)
.....| ++.+++..|+..+|.+|+
T Consensus 242 ~~~~~~~p-~~~~li~~~l~~~p~~RP 267 (330)
T 2izr_A 242 EVLCENFP-EMATYLRYVRRLDFFEKP 267 (330)
T ss_dssp HHHTTTCH-HHHHHHHHHHHCCTTCCC
T ss_pred HHHhccCh-HHHHHHHHHHhCCCCCCC
Confidence 111234 799999999999999995
No 74
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9.7e-42 Score=329.14 Aligned_cols=238 Identities=21% Similarity=0.269 Sum_probs=192.3
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCC-------
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN------- 287 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 287 (467)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 468999999999999999999987 69999999997543 334577899999999999999999999885543
Q ss_pred --------------------------------------------------eeeEEEecccCCCHHHhhhcCCC--CCCHH
Q 041491 288 --------------------------------------------------FEALVLEYMANGSLEKCLYSSNG--ILDIF 315 (467)
Q Consensus 288 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--~~~~~ 315 (467)
..++||||+++++|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999976443 45667
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC-----------------cccccc
Q 041491 316 QRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-----------------SMRTQT 378 (467)
Q Consensus 316 ~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-----------------~~~~~~ 378 (467)
.++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++...... ..++..
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 9999999999999999999999999999998876432 236778
Q ss_pred ccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHH----HHHhhhcccccccccccccccchhHHHHHH
Q 041491 379 LATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLK----NWVNDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 379 ~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
|.+||...+..++.++|||||||++|||++|..|+........... .......++.+.+++.+||..||.+|++ +
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-~ 320 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPE-A 320 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCC-H
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCC-H
Confidence 8999999988999999999999999999999888643211100000 0011223455789999999999999985 4
Q ss_pred HHHH
Q 041491 455 KQCV 458 (467)
Q Consensus 455 ~~~~ 458 (467)
.|++
T Consensus 321 ~~~l 324 (332)
T 3qd2_B 321 TDII 324 (332)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 75
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-41 Score=325.68 Aligned_cols=243 Identities=19% Similarity=0.245 Sum_probs=198.2
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccccc---chHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG---ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
..++|++.+.||+|+||.||+|++. +++.||+|++...... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3478999999999999999999986 5889999998754322 34678899999999999999999999999999999
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 371 (467)
||||+++++|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999998653 46899999999999999999999 999999999999999999999999999999876543
Q ss_pred C------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH----------hhhccccc
Q 041491 372 E------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV----------NDFLPISV 435 (467)
Q Consensus 372 ~------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~----------~~~~~~~~ 435 (467)
. ..++..|.+||...+..++.++||||||+++|||++|+.||...... ...... ...+|+.+
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l 265 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPRPSTVRPGIPVAF 265 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCCGGGTSTTCCTHH
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCCccccCCCCCHHH
Confidence 2 24567789999999999999999999999999999999999764322 111111 22355668
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 436 MNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
.+++.+||..||++|++++++++..+.+.
T Consensus 266 ~~li~~~l~~dP~~Rp~s~~~l~~~l~~~ 294 (309)
T 2h34_A 266 DAVIARGMAKNPEDRYVTCGDLSAAAHAA 294 (309)
T ss_dssp HHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred HHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence 99999999999999998888888887653
No 76
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.8e-42 Score=336.31 Aligned_cols=233 Identities=27% Similarity=0.266 Sum_probs=189.1
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccc---cchHHHHHHHHH-HHcCCCCCceeEEEEeecCCeeeE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD---GALKSFDAECEV-LKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
.++|++.+.||+|+||.||+|+++. ++.||+|+++.... .....+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 4689999999999999999999874 88999999976532 233456667776 467899999999999999999999
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC-
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG- 370 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~- 370 (467)
||||++||+|.+++... +.+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999988653 46899999999999999999999 99999999999999999999999999999986422
Q ss_pred ----CCccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhcccccccccc
Q 041491 371 ----KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVD 440 (467)
Q Consensus 371 ----~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~ 440 (467)
....++..|.|||.+.+..++.++|||||||++|||++|+.||......+ ....... ..++..+.+++.
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~li~ 271 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILNKPLQLKPNITNSARHLLE 271 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-HHHHHHHSCCCCCSSSCHHHHHHHH
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcccCCCCCCCHHHHHHHH
Confidence 22346778999999999999999999999999999999999997643322 1222222 234456899999
Q ss_pred cccccchhHHHHHH
Q 041491 441 TSLLRREDKYFAAK 454 (467)
Q Consensus 441 ~~l~~~~~~r~~~~ 454 (467)
+||..||.+|++..
T Consensus 272 ~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 272 GLLQKDRTKRLGAK 285 (373)
T ss_dssp HHTCSSGGGSTTTT
T ss_pred HHcccCHHhCCCCC
Confidence 99999999998653
No 77
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.7e-41 Score=325.60 Aligned_cols=234 Identities=25% Similarity=0.329 Sum_probs=179.6
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 293 (467)
..++|++.+.||+|+||.||+|.+. +++.||+|+++.... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 3568999999999999999999886 489999999975532 34467889999999999999999999999999999999
Q ss_pred ecccCCCHHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 294 EYMANGSLEKCLYSSN-----GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
||++ |+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 59988875432 35899999999999999999999 999999999999999999999999999999876
Q ss_pred CCC-----CccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccc---------------------
Q 041491 369 NGK-----ESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM--------------------- 421 (467)
Q Consensus 369 ~~~-----~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~--------------------- 421 (467)
... ...++..|.+||...+ ..++.++|||||||++|||+||+.||......+.
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence 532 2345777899998875 4689999999999999999999999975432211
Q ss_pred --------------cHHHHHhh----hcccccccccccccccchhHHHHH
Q 041491 422 --------------NLKNWVND----FLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 422 --------------~~~~~~~~----~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
.+...... .+++.+.+++.+||..||.+|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 288 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA 288 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCH
Confidence 00111111 234458899999999999999853
No 78
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.3e-41 Score=319.89 Aligned_cols=235 Identities=20% Similarity=0.257 Sum_probs=200.4
Q ss_pred HhccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
..++|++.+.||+|+||.||+|.+.. +..||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 35689999999999999999999865 78999999987666667889999999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---cCCCcEEEeccccceecCCC
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 371 (467)
|+++++|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 87 LCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred ccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999999988553 46899999999999999999999 9999999999999999 78889999999999876543
Q ss_pred C----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH----------Hhhhccccccc
Q 041491 372 E----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW----------VNDFLPISVMN 437 (467)
Q Consensus 372 ~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~----------~~~~~~~~~~~ 437 (467)
. ..++..|.+||...+ .++.++||||||+++|||++|+.||......+. .... ....+++.+.+
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (277)
T 3f3z_A 163 KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-MLKIREGTFTFPEKDWLNVSPQAES 240 (277)
T ss_dssp SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCHHHHTTSCHHHHH
T ss_pred cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCCCCchhhhcCCHHHHH
Confidence 3 345677899998765 489999999999999999999999976432221 1111 12245667999
Q ss_pred ccccccccchhHHHHHHHH
Q 041491 438 VVDTSLLRREDKYFAAKKQ 456 (467)
Q Consensus 438 ~i~~~l~~~~~~r~~~~~~ 456 (467)
++.+||..||.+|++..+.
T Consensus 241 li~~~l~~dp~~R~s~~~~ 259 (277)
T 3f3z_A 241 LIRRLLTKSPKQRITSLQA 259 (277)
T ss_dssp HHHHHTCSSTTTSCCHHHH
T ss_pred HHHHHccCChhhCcCHHHH
Confidence 9999999999999875543
No 79
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.2e-41 Score=336.11 Aligned_cols=235 Identities=23% Similarity=0.244 Sum_probs=195.8
Q ss_pred HhccCccCCccCcc--cceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 216 ATDHFSEKSLIGIG--SFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 216 ~~~~y~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
..++|++.+.||+| +||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 35789999999999 99999999987 59999999997653 234467888999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 291 LVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
+||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 9999999999999986642 46899999999999999999999 9999999999999999999999999999986542
Q ss_pred CC------------CccccccccccccccC--CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHH----------
Q 041491 370 GK------------ESMRTQTLATIEYGRE--GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKN---------- 425 (467)
Q Consensus 370 ~~------------~~~~~~~~~~pe~~~~--~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~---------- 425 (467)
.. ...++..|.+||.+.+ ..++.++|||||||++|||++|+.||.+....+.....
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 259 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccc
Confidence 11 1245666899999877 67899999999999999999999999764222111000
Q ss_pred -----------------------------------------HHhhhcccccccccccccccchhHHHHH
Q 041491 426 -----------------------------------------WVNDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 426 -----------------------------------------~~~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
-....+++.+.+++.+||..||.+|++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta 328 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA 328 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCH
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCH
Confidence 0122345568899999999999999853
No 80
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.6e-41 Score=323.21 Aligned_cols=241 Identities=21% Similarity=0.339 Sum_probs=195.3
Q ss_pred hccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHc--CCCCCceeEEEEeec----CCeee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKS--VRHRNLVKIISSCSN----GNFEA 290 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~----~~~~~ 290 (467)
.++|++.+.||+|+||.||+|++ +++.||+|++... ....+.+|.+++.. ++||||+++++++.. .+..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 57899999999999999999988 6899999998644 33556667777766 799999999998643 35689
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCceecCCCCCCeeecCCCcEEEeccccc
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG-----YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 365 (467)
+||||+++|+|.+++.. ..+++..+..++.|++.||+|||.. .+++|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 99999999999999943 4689999999999999999999932 2679999999999999999999999999999
Q ss_pred eecCCCC---------ccccccccccccccCC------CCCCcccchhhHHHHHHHhcC----------CCCCCcccccc
Q 041491 366 KLLNGKE---------SMRTQTLATIEYGREG------QVSPKSDVYGYGITLIETFTK----------KKPTCEIFCEE 420 (467)
Q Consensus 366 ~~~~~~~---------~~~~~~~~~pe~~~~~------~~~~~~Dv~slGvil~el~tg----------~~Pf~~~~~~~ 420 (467)
+...... ..++..|.|||...+. .++.++|||||||++|||+|| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 7654322 2467788999988776 455799999999999999999 88987654444
Q ss_pred ccHHHHHhh-----------------hcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 421 MNLKNWVND-----------------FLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 421 ~~~~~~~~~-----------------~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
......... ..++.+.+++.+||..||.+|+ ++.++++.|.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARL-TALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSC-CHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCC-CHHHHHHHHhcc
Confidence 333333221 1223478999999999999997 577888887665
No 81
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-42 Score=333.39 Aligned_cols=248 Identities=24% Similarity=0.354 Sum_probs=206.2
Q ss_pred HHHHHHhccCccCCccCcccceeEEEEEecC------CCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEe
Q 041491 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLD------GMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC 283 (467)
Q Consensus 211 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~ 283 (467)
..+....++|++.+.||+|+||.||+|++.+ ++.||+|+++.... ...+.+.+|+.++++++||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 119 (343)
T 1luf_A 40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 119 (343)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3445567899999999999999999998853 47899999976532 3456789999999999999999999999
Q ss_pred ecCCeeeEEEecccCCCHHHhhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCce
Q 041491 284 SNGNFEALVLEYMANGSLEKCLYSSN-----------------------GILDIFQRLSIMIDVALALEYLHFGYSNPVV 340 (467)
Q Consensus 284 ~~~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~iv 340 (467)
.+.+..++||||+++|+|.+++.... ..+++.+++.++.|++.||.||| ++||+
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~iv 196 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFV 196 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 99999999999999999999987642 46899999999999999999999 99999
Q ss_pred ecCCCCCCeeecCCCcEEEeccccceecCCC-------CccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCC
Q 041491 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK-------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKP 412 (467)
Q Consensus 341 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~P 412 (467)
||||||+||+++.++.+||+|||+++..... ...++..|.+||...+..++.++||||||+++|||+| |+.|
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999765422 2234566899999888899999999999999999999 9999
Q ss_pred CCccccccccHHHHHh--------hhcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 413 TCEIFCEEMNLKNWVN--------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 413 f~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
|.+....+ ....+. ..+++.+.+++.+||..||.+|+ ++.++++.|.++
T Consensus 277 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-s~~~~~~~L~~~ 333 (343)
T 1luf_A 277 YYGMAHEE--VIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRP-SFCSIHRILQRM 333 (343)
T ss_dssp TTTSCHHH--HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHHT
T ss_pred CCCCChHH--HHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCC-CHHHHHHHHHHH
Confidence 97643222 111111 23445689999999999999996 566676666554
No 82
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.6e-41 Score=321.27 Aligned_cols=239 Identities=18% Similarity=0.171 Sum_probs=200.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 294 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ..+.+.+|+.+++.+ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 468999999999999999999974 58999999986542 335688999999999 79999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc-----EEEeccccceecC
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV-----AHLSDFGIAKLLN 369 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~-----~kl~Dfg~a~~~~ 369 (467)
|+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 99999999877667999999999999999999999 999999999999999987775 9999999998765
Q ss_pred CCC------------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc--cHHHH---------
Q 041491 370 GKE------------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM--NLKNW--------- 426 (467)
Q Consensus 370 ~~~------------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~--~~~~~--------- 426 (467)
... ..++..|.+||...+..++.++||||||+++|||++|+.||........ .+...
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence 432 2356778999999999999999999999999999999999986422111 11111
Q ss_pred --HhhhcccccccccccccccchhHHHHHHHHHHHHHH
Q 041491 427 --VNDFLPISVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 427 --~~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
....+++.+.+++.+|+..+|.+|+ ++.++++.+.
T Consensus 243 ~~~~~~~~~~l~~li~~~l~~dp~~RP-~~~~l~~~l~ 279 (298)
T 1csn_A 243 RELCAGFPEEFYKYMHYARNLAFDATP-DYDYLQGLFS 279 (298)
T ss_dssp HHHTTTSCHHHHHHHHHHHHCCTTCCC-CHHHHHHHHH
T ss_pred HHHHhhCcHHHHHHHHHHhcCCcccCC-CHHHHHHHHH
Confidence 1124566799999999999999996 3445554443
No 83
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.5e-42 Score=345.61 Aligned_cols=246 Identities=21% Similarity=0.328 Sum_probs=206.1
Q ss_pred HHHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCee
Q 041491 210 YQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 210 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 289 (467)
.+++.+..++|++.+.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++. .+..
T Consensus 180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence 345566778999999999999999999999888999999997653 45678999999999999999999999987 5678
Q ss_pred eEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 290 ALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++..
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 99999999999999996543 26889999999999999999999 999999999999999999999999999999876
Q ss_pred CCC------CccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhccc
Q 041491 369 NGK------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPI 433 (467)
Q Consensus 369 ~~~------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~ 433 (467)
... ....+..|.|||.+..+.++.++|||||||++|||+| |+.||.+....+ ....+. ..+|+
T Consensus 335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~~~~~~~~~~ 412 (454)
T 1qcf_A 335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYRMPRPENCPE 412 (454)
T ss_dssp CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHHTCCCCCCTTSCH
T ss_pred CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCCCCCCCCH
Confidence 532 2223456899999988899999999999999999999 999997643322 112221 23445
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 434 SVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 434 ~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
.+.+++.+|+..||++|+ ++.+++..|.+
T Consensus 413 ~l~~li~~cl~~dp~~RP-t~~~i~~~L~~ 441 (454)
T 1qcf_A 413 ELYNIMMRCWKNRPEERP-TFEYIQSVLDD 441 (454)
T ss_dssp HHHHHHHHHTCSSGGGSC-CHHHHHHHHHT
T ss_pred HHHHHHHHHccCChhHCc-CHHHHHHHHHH
Confidence 689999999999999996 56666666544
No 84
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.1e-41 Score=333.24 Aligned_cols=240 Identities=18% Similarity=0.190 Sum_probs=192.9
Q ss_pred HhccCccCCccCcccceeEEEEEecC------CCeEEEEEeeccccc-----------chHHHHHHHHHHHcCCCCCcee
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD------GMEVAIKVFHLQFDG-----------ALKSFDAECEVLKSVRHRNLVK 278 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~ 278 (467)
..++|++.+.||+|+||.||+|.+.. ++.||+|++...... .......|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999998864 478999998754321 1122345666777889999999
Q ss_pred EEEEeecC----CeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeec--
Q 041491 279 IISSCSNG----NFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLD-- 352 (467)
Q Consensus 279 ~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-- 352 (467)
+++++... ...++||||+ +++|.+++......+++.++..++.|++.||+||| ++||+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 99998764 5689999999 99999999877678999999999999999999999 99999999999999999
Q ss_pred CCCcEEEeccccceecCCCC------------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc
Q 041491 353 DDMVAHLSDFGIAKLLNGKE------------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE 420 (467)
Q Consensus 353 ~~~~~kl~Dfg~a~~~~~~~------------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~ 420 (467)
.++.+||+|||+++.+.... ..++..|.+||...+..++.++|||||||++|||+||+.||.+.....
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 88999999999998764321 126778899999999999999999999999999999999998642221
Q ss_pred c-----------cHHHHHh-----hhcccccccccccccccchhHHHHHHHHHHHH
Q 041491 421 M-----------NLKNWVN-----DFLPISVMNVVDTSLLRREDKYFAAKKQCVSS 460 (467)
Q Consensus 421 ~-----------~~~~~~~-----~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~ 460 (467)
. .+..+.. ...|+++.+++..|+..+|.+|++ +.++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~-~~~l~~~ 323 (364)
T 3op5_A 269 KYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPL-YENLRDI 323 (364)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCC-HHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCC-HHHHHHH
Confidence 1 1222222 234667999999999999999963 4444433
No 85
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=332.55 Aligned_cols=244 Identities=23% Similarity=0.334 Sum_probs=202.7
Q ss_pred HHHhccCccCCccCcccceeEEEEEecC--------CCeEEEEEeecccc-cchHHHHHHHHHHHcC-CCCCceeEEEEe
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRFLD--------GMEVAIKVFHLQFD-GALKSFDAECEVLKSV-RHRNLVKIISSC 283 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 283 (467)
.+..++|.+.+.||+|+||.||+|++.. +..||+|+++.... ...+.+.+|+++++++ +||||+++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 3456799999999999999999998632 35799999976532 3446788999999999 899999999999
Q ss_pred ecCCeeeEEEecccCCCHHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCC
Q 041491 284 SNGNFEALVLEYMANGSLEKCLYSSN---------------GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSN 348 (467)
Q Consensus 284 ~~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~N 348 (467)
...+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| ++||+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcce
Confidence 99999999999999999999997653 35899999999999999999999 9999999999999
Q ss_pred eeecCCCcEEEeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCcccccc
Q 041491 349 VLLDDDMVAHLSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEE 420 (467)
Q Consensus 349 Ill~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~ 420 (467)
|+++.++.+||+|||+++...... ...+..|.+||...+..++.++|||||||++|||+| |+.||......+
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~ 301 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 301 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999998765322 223456899999999999999999999999999999 999997643222
Q ss_pred ccHHHHHhh--------hcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 421 MNLKNWVND--------FLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 421 ~~~~~~~~~--------~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
....+.. .+++++.+++.+||..+|.+|+ ++.|+++.|.+
T Consensus 302 --~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp-s~~ell~~L~~ 349 (382)
T 3tt0_A 302 --LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRP-TFKQLVEDLDR 349 (382)
T ss_dssp --HHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred --HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHH
Confidence 2222222 2345689999999999999995 55566665544
No 86
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=322.11 Aligned_cols=230 Identities=23% Similarity=0.315 Sum_probs=188.0
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc--------------------------cchHHHHHHHHHHH
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--------------------------GALKSFDAECEVLK 269 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 269 (467)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999886 488999999865421 12356889999999
Q ss_pred cCCCCCceeEEEEeec--CCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCC
Q 041491 270 SVRHRNLVKIISSCSN--GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPS 347 (467)
Q Consensus 270 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~ 347 (467)
+++||||+++++++.+ .+..++||||+++++|.+++. ...+++..+..++.|++.||+||| ++||+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999986 568899999999999988653 346899999999999999999999 999999999999
Q ss_pred CeeecCCCcEEEeccccceecCCCC-----ccccccccccccccCCC---CCCcccchhhHHHHHHHhcCCCCCCccccc
Q 041491 348 NVLLDDDMVAHLSDFGIAKLLNGKE-----SMRTQTLATIEYGREGQ---VSPKSDVYGYGITLIETFTKKKPTCEIFCE 419 (467)
Q Consensus 348 NIll~~~~~~kl~Dfg~a~~~~~~~-----~~~~~~~~~pe~~~~~~---~~~~~Dv~slGvil~el~tg~~Pf~~~~~~ 419 (467)
||+++.++.+||+|||+++...... ..++..|.+||...+.. ++.++|||||||++|||++|+.||......
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 246 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred HEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence 9999999999999999998776432 34677889999887655 377899999999999999999999764221
Q ss_pred cccHHHHH-h--------hhcccccccccccccccchhHHHHH
Q 041491 420 EMNLKNWV-N--------DFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 420 ~~~~~~~~-~--------~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
. ..... . ..+++.+.+++.+||..||.+|++.
T Consensus 247 ~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~ 287 (298)
T 2zv2_A 247 C--LHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVV 287 (298)
T ss_dssp H--HHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCH
T ss_pred H--HHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCH
Confidence 1 11111 1 1244568999999999999999853
No 87
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.6e-41 Score=343.48 Aligned_cols=241 Identities=20% Similarity=0.251 Sum_probs=202.9
Q ss_pred HHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
...++|++.+.||+|+||.||+|++. +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..|
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence 34578999999999999999999986 59999999997542 234566889999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 291 LVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
+||||++||+|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+++...
T Consensus 261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 9999999999999886543 35899999999999999999999 9999999999999999999999999999999876
Q ss_pred CCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc--ccHHHHHh-------hhcccccc
Q 041491 370 GKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE--MNLKNWVN-------DFLPISVM 436 (467)
Q Consensus 370 ~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~--~~~~~~~~-------~~~~~~~~ 436 (467)
... ..++..|.|||.+.+..++.++|||||||++|||++|+.||....... ..+..... ..+++++.
T Consensus 338 ~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~~ 417 (576)
T 2acx_A 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417 (576)
T ss_dssp TTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred cCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHHH
Confidence 432 346778999999988889999999999999999999999998643211 11112211 22455689
Q ss_pred cccccccccchhHHHH----HHHHHH
Q 041491 437 NVVDTSLLRREDKYFA----AKKQCV 458 (467)
Q Consensus 437 ~~i~~~l~~~~~~r~~----~~~~~~ 458 (467)
++|.+||..||.+|+. ++.|++
T Consensus 418 dLI~~lL~~dP~~R~g~~~~sa~eil 443 (576)
T 2acx_A 418 SLCSQLLCKDPAERLGCRGGSAREVK 443 (576)
T ss_dssp HHHHHHTCSSGGGSTTCSSSHHHHHH
T ss_pred HHHHHhccCCHHHcCCCCCCCHHHHH
Confidence 9999999999999983 445543
No 88
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.2e-41 Score=319.07 Aligned_cols=240 Identities=22% Similarity=0.342 Sum_probs=191.6
Q ss_pred hccCccCCccCcccceeEEEEEecCCCeEEEEEeecccc----cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD----GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|.+ .++.||+|+++.... ...+.+.+|+++++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 46899999999999999999997 488999999875432 2346788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---ceecCCCCCCeeecC--------CCcEEEec
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP---VVHCDIKPSNVLLDD--------DMVAHLSD 361 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~---ivH~dlkp~NIll~~--------~~~~kl~D 361 (467)
|||+++++|.+++. ...+++..++.++.|++.||+||| ++| |+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999999999884 346899999999999999999999 888 999999999999986 67899999
Q ss_pred cccceecCCCC---ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH-------Hhhhc
Q 041491 362 FGIAKLLNGKE---SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW-------VNDFL 431 (467)
Q Consensus 362 fg~a~~~~~~~---~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~-------~~~~~ 431 (467)
||++....... ..++..|.+||...+..++.++||||||+++|||++|+.||............. ....+
T Consensus 160 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (271)
T 3dtc_A 160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC 239 (271)
T ss_dssp CCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTC
T ss_pred CCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCccc
Confidence 99998765432 346677899999988889999999999999999999999997643222111111 11234
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 432 PISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 432 ~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
++.+.+++.+|+..+|.+|+ ++.|+++.|.+
T Consensus 240 ~~~~~~li~~~l~~~p~~Rp-s~~e~l~~L~~ 270 (271)
T 3dtc_A 240 PEPFAKLMEDCWNPDPHSRP-SFTNILDQLTT 270 (271)
T ss_dssp CHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcCCcccCc-CHHHHHHHHhc
Confidence 45689999999999999996 67788887754
No 89
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3e-41 Score=324.46 Aligned_cols=233 Identities=21% Similarity=0.289 Sum_probs=198.9
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccccc------chHHHHHHHHHHHcCCCCCceeEEEEeecCCee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG------ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 289 (467)
.++|++.+.||+|+||.||+|++. +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 468999999999999999999986 4899999999754321 356789999999999999999999999999999
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC----cEEEeccccc
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM----VAHLSDFGIA 365 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg~a 365 (467)
++||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999999999864 456899999999999999999999 99999999999999999888 7999999999
Q ss_pred eecCCCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc---------cHHHHHhhhcc
Q 041491 366 KLLNGKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM---------NLKNWVNDFLP 432 (467)
Q Consensus 366 ~~~~~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~---------~~~~~~~~~~~ 432 (467)
....... ..++..|.+||...+..++.++||||||+++|||++|+.||......+. ..........+
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 246 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCC
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccC
Confidence 8776432 3467789999999989999999999999999999999999976432211 01111223455
Q ss_pred cccccccccccccchhHHHHH
Q 041491 433 ISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 433 ~~~~~~i~~~l~~~~~~r~~~ 453 (467)
+.+.+++.+||..||.+|++.
T Consensus 247 ~~~~~li~~~l~~dp~~Rps~ 267 (321)
T 2a2a_A 247 ELAKDFIRKLLVKETRKRLTI 267 (321)
T ss_dssp HHHHHHHHTTSCSSTTTSCCH
T ss_pred HHHHHHHHHHcCCChhhCcCH
Confidence 668999999999999999853
No 90
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.1e-41 Score=324.23 Aligned_cols=245 Identities=23% Similarity=0.329 Sum_probs=204.2
Q ss_pred HHHhccCccCCccCcccceeEEEEEe------cCCCeEEEEEeecccc-cchHHHHHHHHHHHcC-CCCCceeEEEEeec
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRF------LDGMEVAIKVFHLQFD-GALKSFDAECEVLKSV-RHRNLVKIISSCSN 285 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 285 (467)
....++|++.+.||+|+||.||+|++ .+++.||+|+++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 44567899999999999999999985 2367899999975533 3457789999999999 89999999999999
Q ss_pred CCeeeEEEecccCCCHHHhhhcCCC-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCC
Q 041491 286 GNFEALVLEYMANGSLEKCLYSSNG-----------------ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSN 348 (467)
Q Consensus 286 ~~~~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~N 348 (467)
.+..++||||+++|+|.+++..... .+++..++.++.|++.||+||| ++||+||||||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~N 175 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARN 175 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccce
Confidence 9999999999999999999876543 4899999999999999999999 9999999999999
Q ss_pred eeecCCCcEEEeccccceecCCCCc-------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCcccccc
Q 041491 349 VLLDDDMVAHLSDFGIAKLLNGKES-------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEE 420 (467)
Q Consensus 349 Ill~~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~ 420 (467)
|+++.++.+||+|||++........ .++..|.+||...+..++.++||||||+++|||+| |+.||.......
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 255 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh
Confidence 9999999999999999987764432 23456899999888899999999999999999999 999997643322
Q ss_pred ccHHHHHh--------hhcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 421 MNLKNWVN--------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 421 ~~~~~~~~--------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
. ...... ...++.+.+++.+||..||.+|+ ++.++++.|.+
T Consensus 256 ~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~ell~~L~~ 304 (313)
T 1t46_A 256 K-FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRP-TFKQIVQLIEK 304 (313)
T ss_dssp H-HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred H-HHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCc-CHHHHHHHHHH
Confidence 1 222222 23445689999999999999997 56666665543
No 91
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.8e-42 Score=345.60 Aligned_cols=231 Identities=22% Similarity=0.264 Sum_probs=188.5
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
..++|++.+.||+|+||.||+|++. +|+.||+|+++... ......+.+|+.+++.++||||+++++++...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 4578999999999999999999986 48999999997542 2334567889999999999999999999999999999
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYS-NPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
||||+++|+|.+++... +.+++..+..++.|++.||+||| + +||+||||||+|||++.++.+||+|||+|+....
T Consensus 226 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999988553 46899999999999999999999 8 8999999999999999999999999999986432
Q ss_pred C-----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH------hhhccccccccc
Q 041491 371 K-----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV------NDFLPISVMNVV 439 (467)
Q Consensus 371 ~-----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~i 439 (467)
. ...++..|.|||++.+..++.++|||||||++|||++|+.||........ ..... ...+++.+.++|
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~p~~~~~~~~~li 380 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-FELILMEEIRFPRTLGPEAKSLL 380 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCTTSCHHHHHHH
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH-HHHHHhCCCCCCccCCHHHHHHH
Confidence 2 23467789999999999999999999999999999999999976432211 11111 123455689999
Q ss_pred ccccccchhHHH
Q 041491 440 DTSLLRREDKYF 451 (467)
Q Consensus 440 ~~~l~~~~~~r~ 451 (467)
.+||..||.+|+
T Consensus 381 ~~~L~~dP~~R~ 392 (446)
T 4ejn_A 381 SGLLKKDPKQRL 392 (446)
T ss_dssp HHHTCSSTTTST
T ss_pred HHHcccCHHHhC
Confidence 999999999998
No 92
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1e-40 Score=318.69 Aligned_cols=254 Identities=30% Similarity=0.455 Sum_probs=210.7
Q ss_pred cccccHHHHHHHhccCccC------CccCcccceeEEEEEecCCCeEEEEEeeccc----ccchHHHHHHHHHHHcCCCC
Q 041491 205 WRRFSYQELLLATDHFSEK------SLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF----DGALKSFDAECEVLKSVRHR 274 (467)
Q Consensus 205 ~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~ 274 (467)
...+++.++...+++|... +.||+|+||.||+|.+ +++.||+|++.... ....+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4568899999999999887 8999999999999987 68899999986532 23456789999999999999
Q ss_pred CceeEEEEeecCCeeeEEEecccCCCHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeec
Q 041491 275 NLVKIISSCSNGNFEALVLEYMANGSLEKCLYSS--NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLD 352 (467)
Q Consensus 275 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~ 352 (467)
||+++++++.+.+..++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999988643 346899999999999999999999 99999999999999999
Q ss_pred CCCcEEEeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc----
Q 041491 353 DDMVAHLSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM---- 421 (467)
Q Consensus 353 ~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~---- 421 (467)
+++.+||+|||++....... ..++..|.+||...+ .++.++||||||+++|||++|+.||........
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 99999999999998765422 245677899998765 478999999999999999999999976433221
Q ss_pred ---------cHHHHHhhh-------cccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 422 ---------NLKNWVNDF-------LPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 422 ---------~~~~~~~~~-------~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
.+..+.... .+..+.+++.+||..+|.+|+ ++.++++.|.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-s~~~l~~~L~~l 304 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRP-DIKKVQQLLQEM 304 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSC-CHHHHHHHHHHH
T ss_pred HHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCc-CHHHHHHHHHHH
Confidence 112222111 123477899999999999997 566777777655
No 93
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2e-41 Score=324.54 Aligned_cols=245 Identities=23% Similarity=0.306 Sum_probs=204.3
Q ss_pred HHHhccCccCCccCcccceeEEEEEec------CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecC
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNG 286 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 286 (467)
....++|.+.+.||+|+||.||+|.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 345678999999999999999999873 35789999997543 23456788999999999999999999999999
Q ss_pred CeeeEEEecccCCCHHHhhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecC
Q 041491 287 NFEALVLEYMANGSLEKCLYSSN-----------------------GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343 (467)
Q Consensus 287 ~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 343 (467)
+..++||||+++++|.+++.... ..+++.+++.++.|++.||+||| ++||+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccc
Confidence 99999999999999999987543 24889999999999999999999 99999999
Q ss_pred CCCCCeeecCCCcEEEeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCc
Q 041491 344 IKPSNVLLDDDMVAHLSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCE 415 (467)
Q Consensus 344 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~ 415 (467)
|||+||++++++.+||+|||+++...... ...+..|.+||...+..++.++||||||+++|||+| |+.||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999998765432 223456899999888889999999999999999999 9999976
Q ss_pred cccccccHHHHHhh--------hcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 416 IFCEEMNLKNWVND--------FLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 416 ~~~~~~~~~~~~~~--------~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
..... ....+.. .+++.+.+++.+||..||.+|+ ++.++++.|.++
T Consensus 256 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp-s~~~l~~~l~~~ 309 (314)
T 2ivs_A 256 IPPER--LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP-VFADISKDLEKM 309 (314)
T ss_dssp CCGGG--HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred CCHHH--HHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCc-CHHHHHHHHHHH
Confidence 44332 2222222 3455689999999999999996 566776666544
No 94
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=323.42 Aligned_cols=246 Identities=19% Similarity=0.216 Sum_probs=202.5
Q ss_pred HHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEee----cCCee
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS----NGNFE 289 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~ 289 (467)
+..++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+++++.++||||+++++++. ..+..
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 45678999999999999999999984 58999999987665556678999999999999999999999986 34578
Q ss_pred eEEEecccCCCHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccce
Q 041491 290 ALVLEYMANGSLEKCLYS---SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 366 (467)
++||||+++|+|.+++.. ....+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 999999999999998865 3457999999999999999999999 9999999999999999999999999999988
Q ss_pred ecCCCC--------------ccccccccccccccCCC---CCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh-
Q 041491 367 LLNGKE--------------SMRTQTLATIEYGREGQ---VSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN- 428 (467)
Q Consensus 367 ~~~~~~--------------~~~~~~~~~pe~~~~~~---~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~- 428 (467)
...... ..++..|.+||...... ++.++||||||+++|||++|+.||...............
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 262 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc
Confidence 654321 12366789999876543 688999999999999999999999764333333322222
Q ss_pred -------hhcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 429 -------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 429 -------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
..+++.+.+++.+||..||.+|+ ++.++++.+.++
T Consensus 263 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~~ll~~L~~~ 304 (317)
T 2buj_A 263 QLSIPQSPRHSSALWQLLNSMMTVDPHQRP-HIPLLLSQLEAL 304 (317)
T ss_dssp C--CCCCTTSCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHHT
T ss_pred cCCCCccccCCHHHHHHHHHHhhcChhhCC-CHHHHHHHhhhc
Confidence 12345689999999999999997 677777777654
No 95
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-41 Score=329.55 Aligned_cols=240 Identities=23% Similarity=0.301 Sum_probs=195.8
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecc-----cccchHHHHHHHHHHHcCCCCCceeEEEEeec
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQ-----FDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 285 (467)
++....++|++.+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 34556789999999999999999999885 4889999998754 23445778999999999999999999999999
Q ss_pred CCeeeEEEecccCCCHHHhhhcC---------------------------------------CCCCCHHHHHHHHHHHHH
Q 041491 286 GNFEALVLEYMANGSLEKCLYSS---------------------------------------NGILDIFQRLSIMIDVAL 326 (467)
Q Consensus 286 ~~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~ 326 (467)
.+..++||||+++|+|.+++... ...+++..++.++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999988421 113467788899999999
Q ss_pred HHHHHhcCCCCCceecCCCCCCeeecCCC--cEEEeccccceecCC---------CCccccccccccccccC--CCCCCc
Q 041491 327 ALEYLHFGYSNPVVHCDIKPSNVLLDDDM--VAHLSDFGIAKLLNG---------KESMRTQTLATIEYGRE--GQVSPK 393 (467)
Q Consensus 327 ~l~~LH~~~~~~ivH~dlkp~NIll~~~~--~~kl~Dfg~a~~~~~---------~~~~~~~~~~~pe~~~~--~~~~~~ 393 (467)
||+||| ++||+||||||+||+++.++ .+||+|||+++.+.. ....++..|.+||.+.. ..++.+
T Consensus 180 ~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999 99999999999999998776 899999999986532 12345677899998764 678999
Q ss_pred ccchhhHHHHHHHhcCCCCCCccccccccHHHHHh----------hhcccccccccccccccchhHHHHHHH
Q 041491 394 SDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN----------DFLPISVMNVVDTSLLRREDKYFAAKK 455 (467)
Q Consensus 394 ~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~~l~~~~~~r~~~~~ 455 (467)
+|||||||++|||++|+.||......+. ...... ..+++.+.+++.+||..+|.+|++..+
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 327 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDADT-ISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMR 327 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence 9999999999999999999976433221 111111 124566899999999999999986543
No 96
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.4e-42 Score=330.51 Aligned_cols=246 Identities=21% Similarity=0.353 Sum_probs=187.3
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEecC-C---CeEEEEEeecc--cccchHHHHHHHHHHHcCCCCCceeEEEEeec
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFLD-G---MEVAIKVFHLQ--FDGALKSFDAECEVLKSVRHRNLVKIISSCSN 285 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 285 (467)
++.+..++|++.+.||+|+||.||+|++.. + ..||+|+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 344566789999999999999999998764 3 27999998754 23446789999999999999999999999987
Q ss_pred CCee------eEEEecccCCCHHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC
Q 041491 286 GNFE------ALVLEYMANGSLEKCLYSSN-----GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD 354 (467)
Q Consensus 286 ~~~~------~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 354 (467)
.+.. ++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| ++||+||||||+||+++++
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAED 173 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTT
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCC
Confidence 7655 99999999999999885432 25899999999999999999999 9999999999999999999
Q ss_pred CcEEEeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHH
Q 041491 355 MVAHLSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNW 426 (467)
Q Consensus 355 ~~~kl~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~ 426 (467)
+.+||+|||+++...... ...+..|.+||...+..++.++|||||||++|||++ |+.||......+. ....
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~~~ 252 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-YNYL 252 (323)
T ss_dssp SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHH
T ss_pred CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH-HHHH
Confidence 999999999998764432 223456899999988899999999999999999999 9999986433321 1111
Q ss_pred Hh-------hhcccccccccccccccchhHHHHHHHHHHHHHH
Q 041491 427 VN-------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 427 ~~-------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
.. ..+++.+.+++.+||..||.+|+ ++.++++.+.
T Consensus 253 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~~l~~~l~ 294 (323)
T 3qup_A 253 IGGNRLKQPPECMEEVYDLMYQCWSADPKQRP-SFTCLRMELE 294 (323)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSC-CHHHHHHHHH
T ss_pred hcCCCCCCCCccCHHHHHHHHHHccCChhhCc-CHHHHHHHHH
Confidence 11 22345688999999999999995 4445544443
No 97
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.5e-41 Score=320.21 Aligned_cols=242 Identities=21% Similarity=0.291 Sum_probs=192.0
Q ss_pred HHhccCccCCccCcccceeEEEEEecC----CCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCee
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 289 (467)
+..++|++.+.||+|+||.||+|.+.. +..||+|+++... ....+.+.+|+.++++++||||+++++++. .+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 446789999999999999999998753 4569999987543 234567889999999999999999999985 4567
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccC
Confidence 9999999999999999877667999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCC------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhcccc
Q 041491 370 GKE------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPIS 434 (467)
Q Consensus 370 ~~~------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~ 434 (467)
... ...+..|.+||......++.++||||||+++|||++ |+.||......+ ....+. ..+++.
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~ 245 (281)
T 1mp8_A 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGERLPMPPNCPPT 245 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCCCCCTTCCHH
T ss_pred cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcCCCCCCCCCCCHH
Confidence 432 123456899999988899999999999999999997 999998643332 222221 234556
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHh
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
+.+++.+||..||.+|+ ++.+++..+.+
T Consensus 246 l~~li~~~l~~~p~~Rp-s~~~l~~~l~~ 273 (281)
T 1mp8_A 246 LYSLMTKCWAYDPSRRP-RFTELKAQLST 273 (281)
T ss_dssp HHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCc-CHHHHHHHHHH
Confidence 89999999999999996 45566655544
No 98
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=333.08 Aligned_cols=241 Identities=23% Similarity=0.321 Sum_probs=198.3
Q ss_pred HhccCccCCccCcccceeEEEEEec------CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCe
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNF 288 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 288 (467)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ......+.+|+.++++++||||+++++++...+.
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 3468999999999999999999853 36789999986542 3344578899999999999999999999999999
Q ss_pred eeEEEecccCCCHHHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC---cEEE
Q 041491 289 EALVLEYMANGSLEKCLYSSN------GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM---VAHL 359 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl 359 (467)
.++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| ++||+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEE
Confidence 999999999999999986543 35899999999999999999999 99999999999999999555 5999
Q ss_pred eccccceecCC-------CCccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHhh--
Q 041491 360 SDFGIAKLLNG-------KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVND-- 429 (467)
Q Consensus 360 ~Dfg~a~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~-- 429 (467)
+|||+++.... ....++..|.+||.+.+..++.++|||||||++|||+| |+.||...... .....+..
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~~i~~~~ 303 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGG 303 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTC
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC
Confidence 99999975421 12234567899999988899999999999999999998 99999764322 22222221
Q ss_pred ------hcccccccccccccccchhHHHHHHHHHHHHHH
Q 041491 430 ------FLPISVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 430 ------~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
.+++.+.+++.+||..+|.+|+ ++.++++.+-
T Consensus 304 ~~~~~~~~~~~l~~li~~~l~~dP~~Rp-s~~eil~~l~ 341 (367)
T 3l9p_A 304 RMDPPKNCPGPVYRIMTQCWQHQPEDRP-NFAIILERIE 341 (367)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHcCCCHhHCc-CHHHHHHHHH
Confidence 2344588999999999999996 5666666553
No 99
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.5e-41 Score=327.33 Aligned_cols=241 Identities=25% Similarity=0.365 Sum_probs=197.4
Q ss_pred hccCccCCccCcccceeEEEEEecC-CC----eEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GM----EVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
.++|++.+.||+|+||.||+|++.. ++ +||+|.+.... ....+.+.+|+.++++++||||+++++++..++ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 4689999999999999999998753 44 35788775432 245578999999999999999999999998765 67
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
+|+||+++|+|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 899999999999999887788999999999999999999999 99999999999999999999999999999987654
Q ss_pred CCc-------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHhh--------hcccc
Q 041491 371 KES-------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVND--------FLPIS 434 (467)
Q Consensus 371 ~~~-------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~--------~~~~~ 434 (467)
... ..+..|.+||+..+..++.++|||||||++|||+| |+.||......+ ....+.. ..+..
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 247 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGERLPQPPICTID 247 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCCCCCTTBCHH
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHHHcCCCCCCCccCCHH
Confidence 321 23457899999999999999999999999999999 999998643332 2333222 23345
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
+.+++.+|+..+|.+|+ ++.+++..+.++
T Consensus 248 ~~~li~~~l~~~p~~Rp-s~~ell~~l~~~ 276 (327)
T 3poz_A 248 VYMIMVKCWMIDADSRP-KFRELIIEFSKM 276 (327)
T ss_dssp HHHHHHHHTCSCGGGSC-CHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCC-CHHHHHHHHHHH
Confidence 88999999999999996 566777766544
No 100
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.3e-41 Score=321.79 Aligned_cols=245 Identities=22% Similarity=0.340 Sum_probs=205.9
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
++.+..++|++.+.||+|+||.||+|.+.. +..||+|++... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 444567899999999999999999999875 889999999754 334577899999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 291 LVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
+||||+++++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999997643 46899999999999999999999 9999999999999999999999999999998766
Q ss_pred CCCc------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhcccc
Q 041491 370 GKES------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPIS 434 (467)
Q Consensus 370 ~~~~------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~ 434 (467)
.... ..+..|.+||...+..++.++||||||+++|+|++ |..||...... ....... ..+++.
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRMERPEGCPEK 240 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCCCCCCTTCCHH
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhccCCCCCCCCCCHH
Confidence 4332 23446899999988899999999999999999999 99999764322 2222222 223456
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHh
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
+.+++.+||..||.+|+ ++.++++.+.+
T Consensus 241 l~~li~~~l~~dp~~Rp-s~~~~~~~l~~ 268 (288)
T 3kfa_A 241 VYELMRACWQWNPSDRP-SFAEIHQAFET 268 (288)
T ss_dssp HHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred HHHHHHHHhCCChhhCc-CHHHHHHHHHH
Confidence 88999999999999995 55566555543
No 101
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-41 Score=330.06 Aligned_cols=246 Identities=22% Similarity=0.333 Sum_probs=201.3
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEec------CCCeEEEEEeeccc-ccchHHHHHHHHHHHcC-CCCCceeEEEEe
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSV-RHRNLVKIISSC 283 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 283 (467)
++.+..++|++.+.||+|+||.||+|++. ++..||+|+++... ....+.+.+|+.+++++ +||||+++++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34556789999999999999999999862 35689999997543 33457789999999999 899999999999
Q ss_pred ecCCeeeEEEecccCCCHHHhhhcCCC----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcee
Q 041491 284 SNGNFEALVLEYMANGSLEKCLYSSNG----------------------ILDIFQRLSIMIDVALALEYLHFGYSNPVVH 341 (467)
Q Consensus 284 ~~~~~~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 341 (467)
...+..++||||+++|+|.+++..... .+++..++.++.|++.||+||| ++||+|
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH 195 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVH 195 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 999999999999999999999976543 3789999999999999999999 999999
Q ss_pred cCCCCCCeeecCCCcEEEeccccceecCCCCc-------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCC
Q 041491 342 CDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES-------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPT 413 (467)
Q Consensus 342 ~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf 413 (467)
|||||+||+++.++.+||+|||++........ .++..|.+||...++.++.++|||||||++|||+| |+.||
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 275 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999986643321 23446899999888899999999999999999998 99999
Q ss_pred CccccccccHHHHHhh--------hcccccccccccccccchhHHHHHHHHHHHHHH
Q 041491 414 CEIFCEEMNLKNWVND--------FLPISVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 414 ~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
....... ........ ..++.+.+++.+||..||.+|+ ++.+++..+-
T Consensus 276 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~~l~~~l~ 330 (344)
T 1rjb_A 276 PGIPVDA-NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRP-SFPNLTSFLG 330 (344)
T ss_dssp TTCCCSH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHH
T ss_pred ccCCcHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCc-CHHHHHHHHH
Confidence 7653322 22223222 2345689999999999999997 4555555543
No 102
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=330.11 Aligned_cols=244 Identities=18% Similarity=0.141 Sum_probs=194.7
Q ss_pred hccCccCCccCcccceeEEEEEec----CCCeEEEEEeeccccc-----------chHHHHHHHHHHHcCCCCCceeEEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQFDG-----------ALKSFDAECEVLKSVRHRNLVKIIS 281 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~ 281 (467)
.++|++.+.||+|+||.||+|.+. ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 468999999999999999999986 4788999998754321 1234667888999999999999999
Q ss_pred Eeec----CCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC--
Q 041491 282 SCSN----GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM-- 355 (467)
Q Consensus 282 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~-- 355 (467)
++.. .+..++||||+ +++|.+++.... .+++.+++.++.|++.||+||| ++||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9887 77899999999 999999986543 7899999999999999999999 99999999999999998877
Q ss_pred cEEEeccccceecCCC------------CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccH
Q 041491 356 VAHLSDFGIAKLLNGK------------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL 423 (467)
Q Consensus 356 ~~kl~Dfg~a~~~~~~------------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~ 423 (467)
.+||+|||+++.+... ...++..|.|||...+..++.++|||||||++|||+||+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876421 1245677899999998899999999999999999999999996532222111
Q ss_pred HHH-----------Hhh-----hcccccccccccccccchhHHHHHHHHHHHHHHhccc
Q 041491 424 KNW-----------VND-----FLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSLAM 466 (467)
Q Consensus 424 ~~~-----------~~~-----~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l~~ 466 (467)
... ... .+++++.+++.+||..||++|+ ++.++++.|.++.+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~~l~~~L~~~~~ 328 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKP-NYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCC-CHHHHHHHHCTTCC
T ss_pred HHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCC-CHHHHHHHHhccCC
Confidence 111 111 4555799999999999999996 67788887766543
No 103
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3e-41 Score=317.17 Aligned_cols=231 Identities=21% Similarity=0.356 Sum_probs=175.7
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEE
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 293 (467)
++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 58999999999999999999875 58999999997542 233567889999999999999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC-
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE- 372 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~- 372 (467)
||+ ++++.+++... ..+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp ECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 999 66888877543 56899999999999999999999 9999999999999999999999999999998765432
Q ss_pred ---ccccccccccccccCCCC-CCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhcccccccccccc
Q 041491 373 ---SMRTQTLATIEYGREGQV-SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVDTS 442 (467)
Q Consensus 373 ---~~~~~~~~~pe~~~~~~~-~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~ 442 (467)
..++..|.+||...+..+ +.++||||+|+++|||++|+.||........ ...... ..+++.+.+++.+|
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~ 246 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-FKNISNGVYTLPKFLSPGAAGLIKRM 246 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCTTSCHHHHHHHHHH
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCccCCHHHHHHHHHH
Confidence 235677899998887765 7899999999999999999999976432221 111111 22445689999999
Q ss_pred cccchhHHHHHH
Q 041491 443 LLRREDKYFAAK 454 (467)
Q Consensus 443 l~~~~~~r~~~~ 454 (467)
|..||.+|++..
T Consensus 247 l~~dP~~Rps~~ 258 (275)
T 2eue_A 247 LIVNPLNRISIH 258 (275)
T ss_dssp SCSSGGGSCCHH
T ss_pred hhcCHhHCCCHH
Confidence 999999998543
No 104
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.5e-41 Score=337.81 Aligned_cols=241 Identities=31% Similarity=0.380 Sum_probs=200.7
Q ss_pred HHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCC-eeeE
Q 041491 213 LLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN-FEAL 291 (467)
Q Consensus 213 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~l 291 (467)
+.+..++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 188 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 188 WALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred cccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 3456678999999999999999999884 7899999997543 4578999999999999999999999987655 7899
Q ss_pred EEecccCCCHHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 292 VLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
||||+++|+|.+++..... .+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 265 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999976544 4799999999999999999999 99999999999999999999999999999986653
Q ss_pred CC--ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhccccccccc
Q 041491 371 KE--SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPISVMNVV 439 (467)
Q Consensus 371 ~~--~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~~~i 439 (467)
.. ...+..|.|||.+....++.++|||||||++|||+| |+.||......+ ....+. ..+|+.+.+++
T Consensus 342 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~~~~p~~~~~~l~~li 419 (450)
T 1k9a_A 342 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYKMDAPDGCPPAVYDVM 419 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCCCCCcCCHHHHHHH
Confidence 32 234567899999999999999999999999999998 999998643322 222222 23455689999
Q ss_pred ccccccchhHHHHHHHHHHHHHH
Q 041491 440 DTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 440 ~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
.+|+..||.+|+ ++.+++..|.
T Consensus 420 ~~cl~~dp~~Rp-t~~~l~~~L~ 441 (450)
T 1k9a_A 420 KNCWHLDAATRP-TFLQLREQLE 441 (450)
T ss_dssp HHHTCSSGGGSC-CHHHHHHHHH
T ss_pred HHHcCCChhHCc-CHHHHHHHHH
Confidence 999999999996 4555555443
No 105
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7.3e-41 Score=340.38 Aligned_cols=234 Identities=23% Similarity=0.291 Sum_probs=199.4
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
..++|++.+.||+|+||.||+|++. +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..|+
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 3478999999999999999999986 49999999997542 2344678899999999999999999999999999999
Q ss_pred EEecccCCCHHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 292 VLEYMANGSLEKCLYSS---NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
||||++||+|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+++..
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 99999999999988654 246899999999999999999999 999999999999999999999999999999877
Q ss_pred CCCC-----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc--ccHHHHH-------hhhcccc
Q 041491 369 NGKE-----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE--MNLKNWV-------NDFLPIS 434 (467)
Q Consensus 369 ~~~~-----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~--~~~~~~~-------~~~~~~~ 434 (467)
.... ..++..|.|||.+.+..++.++|||||||++|||+||+.||....... ..+...+ ...+++.
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~~ 419 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPA 419 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCHH
Confidence 5432 256778999999999999999999999999999999999997642211 1111111 1234556
Q ss_pred cccccccccccchhHHHH
Q 041491 435 VMNVVDTSLLRREDKYFA 452 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~ 452 (467)
+.+++.+||..||.+|++
T Consensus 420 ~~~li~~lL~~dP~~R~~ 437 (543)
T 3c4z_A 420 SKDFCEALLQKDPEKRLG 437 (543)
T ss_dssp HHHHHHHHSCSSGGGSCC
T ss_pred HHHHHHHhccCCHhHCCC
Confidence 899999999999999985
No 106
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=328.59 Aligned_cols=237 Identities=23% Similarity=0.303 Sum_probs=197.7
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc--------cchHHHHHHHHHHHcCCCCCceeEEEEeecC
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--------GALKSFDAECEVLKSVRHRNLVKIISSCSNG 286 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 286 (467)
..++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4578999999999999999999875 589999999976531 1334677899999999999999999999999
Q ss_pred CeeeEEEecccCC-CHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccc
Q 041491 287 NFEALVLEYMANG-SLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365 (467)
Q Consensus 287 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 365 (467)
+..++||||+.+| +|.+++.. .+.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR-HPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT-CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 99998854 446899999999999999999999 999999999999999999999999999999
Q ss_pred eecCCCCc----cccccccccccccCCCC-CCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhhhcccccccccc
Q 041491 366 KLLNGKES----MRTQTLATIEYGREGQV-SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVNDFLPISVMNVVD 440 (467)
Q Consensus 366 ~~~~~~~~----~~~~~~~~pe~~~~~~~-~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~i~ 440 (467)
+....... .++..|.+||...+..+ +.++|||||||++|||++|+.||........ ........+++.+.+++.
T Consensus 178 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~l~~li~ 256 (335)
T 3dls_A 178 AYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE-AAIHPPYLVSKELMSLVS 256 (335)
T ss_dssp EECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTT-TCCCCSSCCCHHHHHHHH
T ss_pred eECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHh-hccCCCcccCHHHHHHHH
Confidence 98765432 35778999999888776 7899999999999999999999976322111 000112234567999999
Q ss_pred cccccchhHHHHHHHHHH
Q 041491 441 TSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 441 ~~l~~~~~~r~~~~~~~~ 458 (467)
+||..||.+|++ +.+++
T Consensus 257 ~~L~~dP~~Rps-~~ell 273 (335)
T 3dls_A 257 GLLQPVPERRTT-LEKLV 273 (335)
T ss_dssp HHTCSSGGGSCC-HHHHH
T ss_pred HHccCChhhCcC-HHHHh
Confidence 999999999975 44444
No 107
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.8e-41 Score=327.89 Aligned_cols=232 Identities=28% Similarity=0.331 Sum_probs=195.1
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc---cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD---GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.+.|+..+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 356999999999999999999975 589999999975432 2346788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC-
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK- 371 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 371 (467)
|||++ |++.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 208 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence 99997 5888888666678999999999999999999999 999999999999999999999999999999876543
Q ss_pred Ccccccccccccccc---CCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh--------hhcccccccccc
Q 041491 372 ESMRTQTLATIEYGR---EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN--------DFLPISVMNVVD 440 (467)
Q Consensus 372 ~~~~~~~~~~pe~~~---~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~~~i~ 440 (467)
...++..|.+||... .+.++.++|||||||++|||+||+.||........ +..... ..+++.+.+++.
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~ 287 (348)
T 1u5q_A 209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNESPALQSGHWSEYFRNFVD 287 (348)
T ss_dssp CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCCCCCTTSCHHHHHHHH
T ss_pred cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhcCCCCCCCCCCCHHHHHHHH
Confidence 335677899999873 57789999999999999999999999976432211 111211 123445889999
Q ss_pred cccccchhHHHHH
Q 041491 441 TSLLRREDKYFAA 453 (467)
Q Consensus 441 ~~l~~~~~~r~~~ 453 (467)
+||..+|.+|++.
T Consensus 288 ~~l~~dP~~Rps~ 300 (348)
T 1u5q_A 288 SCLQKIPQDRPTS 300 (348)
T ss_dssp HHTCSSGGGSCCH
T ss_pred HHcccChhhCcCH
Confidence 9999999999753
No 108
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-41 Score=320.42 Aligned_cols=242 Identities=26% Similarity=0.368 Sum_probs=192.8
Q ss_pred hccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEecc
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYM 296 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 296 (467)
.++|++.+.||+|+||.||+|++ .++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 46899999999999999999988 4789999998643 345778999999999999999999998874 478999999
Q ss_pred cCCCHHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc-EEEeccccceecCCC--
Q 041491 297 ANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV-AHLSDFGIAKLLNGK-- 371 (467)
Q Consensus 297 ~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~-~kl~Dfg~a~~~~~~-- 371 (467)
++|+|.+++..... .+++..++.++.|+++||+|||..+.+||+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~ 161 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT 161 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccc
Confidence 99999999976543 4788999999999999999999221189999999999999998886 799999999866542
Q ss_pred CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh--------hhccccccccccccc
Q 041491 372 ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN--------DFLPISVMNVVDTSL 443 (467)
Q Consensus 372 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~~l 443 (467)
...++..|.+||...+..++.++||||||+++|||+||+.||............... ..+++.+.+++.+||
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 241 (307)
T 2eva_A 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCW 241 (307)
T ss_dssp ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHT
T ss_pred cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHh
Confidence 234677899999999999999999999999999999999999754322211111111 234456889999999
Q ss_pred ccchhHHHHHHHHHHHHHHhc
Q 041491 444 LRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 444 ~~~~~~r~~~~~~~~~~l~~l 464 (467)
..||.+|+ ++.++++.|.++
T Consensus 242 ~~dp~~Rp-s~~ell~~L~~~ 261 (307)
T 2eva_A 242 SKDPSQRP-SMEEIVKIMTHL 261 (307)
T ss_dssp CSSGGGSC-CHHHHHHHHHHH
T ss_pred cCChhhCc-CHHHHHHHHHHH
Confidence 99999996 566777666543
No 109
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.6e-41 Score=323.12 Aligned_cols=237 Identities=19% Similarity=0.268 Sum_probs=192.8
Q ss_pred hccCccC-CccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeEEE
Q 041491 217 TDHFSEK-SLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 217 ~~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 293 (467)
.++|++. +.||+|+||.||+|.+. +++.||+|++........+.+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3578884 78999999999999875 5899999999876555667899999999985 7999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc---EEEeccccceecCC
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV---AHLSDFGIAKLLNG 370 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg~a~~~~~ 370 (467)
||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 999999999998654 46899999999999999999999 999999999999999988775 99999999876542
Q ss_pred C------------CccccccccccccccC-----CCCCCcccchhhHHHHHHHhcCCCCCCccccccc------------
Q 041491 371 K------------ESMRTQTLATIEYGRE-----GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM------------ 421 (467)
Q Consensus 371 ~------------~~~~~~~~~~pe~~~~-----~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~------------ 421 (467)
. ...++..|.+||.... ..++.++|||||||++|||++|+.||......+.
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 1 1225677899998764 5678999999999999999999999976432210
Q ss_pred --cHHHH----------HhhhcccccccccccccccchhHHHHHHHHHH
Q 041491 422 --NLKNW----------VNDFLPISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 422 --~~~~~----------~~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
..... ....+++.+.+++.+||..||.+|++ +.|++
T Consensus 247 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps-~~e~l 294 (316)
T 2ac3_A 247 NMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS-AAQVL 294 (316)
T ss_dssp HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC-HHHHH
T ss_pred HHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCC-HHHHh
Confidence 01111 11235566899999999999999985 33443
No 110
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.8e-41 Score=321.51 Aligned_cols=242 Identities=26% Similarity=0.393 Sum_probs=196.5
Q ss_pred HHhccCccCCccCcccceeEEEEEecCCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
+..++|++.+.||+|+||.||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEE
Confidence 45678999999999999999999864 469999887543 2345678999999999999999999998754 457899
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC--
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG-- 370 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~-- 370 (467)
|||+++++|.+++......+++.++..++.|++.||+||| ++||+||||||+||++++++.+||+|||+++....
T Consensus 110 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~ 186 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp EECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred EecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence 9999999999999877778999999999999999999999 99999999999999999999999999999985542
Q ss_pred -----CCcccccccccccccc---CCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh-----------hhc
Q 041491 371 -----KESMRTQTLATIEYGR---EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN-----------DFL 431 (467)
Q Consensus 371 -----~~~~~~~~~~~pe~~~---~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~-----------~~~ 431 (467)
....++..|.+||... ...++.++|||||||++|||+||+.||......+........ ..+
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (307)
T 3lb7_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNC 266 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSS
T ss_pred ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCC
Confidence 1224567789999875 667889999999999999999999999764333221111111 123
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 432 PISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 432 ~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
++.+.+++.+|+..+|.+|+ ++.+++..+..
T Consensus 267 ~~~l~~li~~~l~~~p~~RP-s~~~il~~l~~ 297 (307)
T 3lb7_A 267 PKAMKRLVADCVKKVKEERP-LFPQILSSIEL 297 (307)
T ss_dssp CHHHHHHHHHHSCSSSTTSC-CHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhCChhhCc-CHHHHHHHHHH
Confidence 45688999999999999996 45566655543
No 111
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2e-41 Score=326.29 Aligned_cols=241 Identities=24% Similarity=0.371 Sum_probs=198.8
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCe----EEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GME----VAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
.++|++.+.||+|+||.||+|.+.. ++. ||+|.+.... ......+.+|+.++++++||||+++++++.. +..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccE
Confidence 4689999999999999999998754 444 7777775432 2334667889999999999999999999864 5578
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
+||||+++|+|.+++....+.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999999776678999999999999999999999 99999999999999999999999999999987654
Q ss_pred CC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHhh--------hcccc
Q 041491 371 KE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVND--------FLPIS 434 (467)
Q Consensus 371 ~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~--------~~~~~ 434 (467)
.. ..++..|.+||....+.++.++|||||||++|||+| |+.||......+ ....... ..+..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 245 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLLEKGERLAQPQICTID 245 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHHHTTCBCCCCTTBCTT
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCCCCCCCcCcHH
Confidence 32 123446899999988899999999999999999999 999998643222 2222222 23456
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
+.+++.+||..||.+|+ ++.++++.+.++
T Consensus 246 ~~~li~~~l~~dp~~Rp-s~~el~~~l~~~ 274 (325)
T 3kex_A 246 VYMVMVKCWMIDENIRP-TFKELANEFTRM 274 (325)
T ss_dssp TTHHHHHHTCSCTTTSC-CHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCc-CHHHHHHHHHHH
Confidence 99999999999999995 667777776554
No 112
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.9e-41 Score=317.14 Aligned_cols=233 Identities=21% Similarity=0.329 Sum_probs=197.6
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 293 (467)
.++|++.+.||+|+||.||+|.+.. ++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4789999999999999999998864 8999999997553 233467889999999999999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc---EEEeccccceecCC
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV---AHLSDFGIAKLLNG 370 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg~a~~~~~ 370 (467)
||+++++|.+.+... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999998888544 46899999999999999999999 999999999999999986655 99999999987765
Q ss_pred CC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh----------hhcccccc
Q 041491 371 KE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN----------DFLPISVM 436 (467)
Q Consensus 371 ~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~----------~~~~~~~~ 436 (467)
.. ..++..|.+||...+..++.++||||+|+++|+|++|+.||....... ....... ..+++.+.
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAK 239 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHHHhccccCCchhhcccCHHHH
Confidence 43 246778899999999999999999999999999999999997643222 1111111 23455689
Q ss_pred cccccccccchhHHHHHH
Q 041491 437 NVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 437 ~~i~~~l~~~~~~r~~~~ 454 (467)
+++.+||..||++|++..
T Consensus 240 ~li~~~l~~dp~~Rps~~ 257 (284)
T 3kk8_A 240 SLIDSMLTVNPKKRITAD 257 (284)
T ss_dssp HHHHHHSCSSTTTSCCHH
T ss_pred HHHHHHcccChhhCCCHH
Confidence 999999999999998644
No 113
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.9e-41 Score=318.72 Aligned_cols=245 Identities=25% Similarity=0.379 Sum_probs=193.6
Q ss_pred HHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
++..++|++.+.||+|+||.||+|++. ..||+|+++... ....+.+.+|+.++++++||||+++++++ ..+..++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 445678999999999999999999864 469999987543 23456789999999999999999999965 4556799
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 371 (467)
||||+++++|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccc
Confidence 99999999999999777778999999999999999999999 999999999999999999999999999999865431
Q ss_pred -------Ccccccccccccccc---CCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh-----------hh
Q 041491 372 -------ESMRTQTLATIEYGR---EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN-----------DF 430 (467)
Q Consensus 372 -------~~~~~~~~~~pe~~~---~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~-----------~~ 430 (467)
...++..|.+||... ...++.++||||||+++|||++|+.||......+........ ..
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 253 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTT
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhcccc
Confidence 123567789999876 667888999999999999999999999764332221111111 13
Q ss_pred cccccccccccccccchhHHHHHHHHHHHHHHhcc
Q 041491 431 LPISVMNVVDTSLLRREDKYFAAKKQCVSSALSLA 465 (467)
Q Consensus 431 ~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l~ 465 (467)
+++.+.+++.+||..+|.+|+ ++.+++..|.++.
T Consensus 254 ~~~~l~~li~~~l~~~p~~Rp-s~~ell~~L~~l~ 287 (289)
T 3og7_A 254 CPKRMKRLMAECLKKKRDERP-SFPRILAEIEELA 287 (289)
T ss_dssp SCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHccCChhhCC-CHHHHHHHHHHHh
Confidence 445688999999999999997 6778888776653
No 114
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.5e-41 Score=328.19 Aligned_cols=232 Identities=20% Similarity=0.231 Sum_probs=187.9
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 3578999999999999999999987 58999999997543 334678899999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc--EEEeccccceecCC--
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV--AHLSDFGIAKLLNG-- 370 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~a~~~~~-- 370 (467)
|+++|+|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 97 YASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred eCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 99999999988543 46899999999999999999999 999999999999999987765 99999999975432
Q ss_pred --CCccccccccccccccCCCCCCc-ccchhhHHHHHHHhcCCCCCCccccccccHHHHHhh------------hccccc
Q 041491 371 --KESMRTQTLATIEYGREGQVSPK-SDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVND------------FLPISV 435 (467)
Q Consensus 371 --~~~~~~~~~~~pe~~~~~~~~~~-~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~------------~~~~~~ 435 (467)
....++..|.+||.+.+..++.+ +||||+||++|||++|+.||....... ........ .+++.+
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~ 251 (361)
T 3uc3_A 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSVKYSIPDDIRISPEC 251 (361)
T ss_dssp --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTTCCCCCTTSCCCHHH
T ss_pred CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcCCCCCCCcCCCCHHH
Confidence 22346778999999887777655 899999999999999999998643322 22222111 234568
Q ss_pred ccccccccccchhHHHHH
Q 041491 436 MNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~~ 453 (467)
.+++.+||..||.+|++.
T Consensus 252 ~~li~~~L~~dP~~Rps~ 269 (361)
T 3uc3_A 252 CHLISRIFVADPATRISI 269 (361)
T ss_dssp HHHHHHHSCSCTTTSCCH
T ss_pred HHHHHHHccCChhHCcCH
Confidence 899999999999999854
No 115
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-41 Score=338.07 Aligned_cols=236 Identities=26% Similarity=0.391 Sum_probs=199.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|.+.+.||+|+||.||+|++. +|+.||+|++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 368999999999999999999986 59999999997542 22346788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+++|+|.+++.. .+.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999999854 457999999999999999999999 9999999999999999999999999999999876432
Q ss_pred ----ccccccccccccccCCCC-CCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhccccccccccc
Q 041491 373 ----SMRTQTLATIEYGREGQV-SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVDT 441 (467)
Q Consensus 373 ----~~~~~~~~~pe~~~~~~~-~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~~ 441 (467)
..++..|.|||...+..+ +.++||||+||++|||++|+.||.+..... ....... ..+++.+.+++.+
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~Li~~ 249 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDGIFYTPQYLNPSVISLLKH 249 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH-HHHHHHTTCCCCCTTCCHHHHHHHHH
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH-HHHHHhcCCcCCCccCCHHHHHHHHH
Confidence 346778899999888766 689999999999999999999997643221 1111111 2245568999999
Q ss_pred ccccchhHHHHHHHHHH
Q 041491 442 SLLRREDKYFAAKKQCV 458 (467)
Q Consensus 442 ~l~~~~~~r~~~~~~~~ 458 (467)
||..||.+|++ +.+++
T Consensus 250 ~L~~dP~~Rpt-~~eil 265 (476)
T 2y94_A 250 MLQVDPMKRAT-IKDIR 265 (476)
T ss_dssp HTCSSTTTSCC-HHHHH
T ss_pred HcCCCchhCcC-HHHHH
Confidence 99999999975 33433
No 116
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.1e-41 Score=314.21 Aligned_cols=232 Identities=21% Similarity=0.295 Sum_probs=198.9
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 468999999999999999999986 58999999997543 2345778999999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC---
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK--- 371 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--- 371 (467)
|+++++|.+++.. ...+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|||.+......
T Consensus 86 ~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 9999999998853 457899999999999999999999 999999999999999999999999999999865422
Q ss_pred ----CccccccccccccccCCCC-CCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh--------hhcccccccc
Q 041491 372 ----ESMRTQTLATIEYGREGQV-SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN--------DFLPISVMNV 438 (467)
Q Consensus 372 ----~~~~~~~~~~pe~~~~~~~-~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~~~ 438 (467)
...++..|.+||...+..+ +.++||||||+++|||++|+.||............|.. ..+++.+.++
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 241 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHH
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHH
Confidence 2345677899999877665 77899999999999999999999875444334444432 2345568999
Q ss_pred cccccccchhHHHH
Q 041491 439 VDTSLLRREDKYFA 452 (467)
Q Consensus 439 i~~~l~~~~~~r~~ 452 (467)
+.+||..||.+|++
T Consensus 242 i~~~l~~~p~~Rps 255 (276)
T 2yex_A 242 LHKILVENPSARIT 255 (276)
T ss_dssp HHHHSCSSTTTSCC
T ss_pred HHHHCCCCchhCCC
Confidence 99999999999985
No 117
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=316.49 Aligned_cols=232 Identities=24% Similarity=0.387 Sum_probs=180.8
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 467999999999999999999985 58999999997542 22346789999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+++++|.+++......+++..++.++.|++.||+||| ++|++||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999776678999999999999999999999 9999999999999999999999999999998765322
Q ss_pred -----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH------Hhhhccccccccccc
Q 041491 373 -----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW------VNDFLPISVMNVVDT 441 (467)
Q Consensus 373 -----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~i~~ 441 (467)
..++..|.+||...+..++.++||||||+++|||++|+.||......+. .... ....++.++.+++.+
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~ 245 (278)
T 3cok_A 167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LNKVVLADYEMPSFLSIEAKDLIHQ 245 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------CCSSCCCCCTTSCHHHHHHHHH
T ss_pred CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HHHHhhcccCCccccCHHHHHHHHH
Confidence 2356678999999888899999999999999999999999975422211 1110 112345568999999
Q ss_pred ccccchhHHHH
Q 041491 442 SLLRREDKYFA 452 (467)
Q Consensus 442 ~l~~~~~~r~~ 452 (467)
||..||.+|++
T Consensus 246 ~l~~dp~~Rps 256 (278)
T 3cok_A 246 LLRRNPADRLS 256 (278)
T ss_dssp HSCSSGGGSCC
T ss_pred HcccCHhhCCC
Confidence 99999999985
No 118
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.3e-41 Score=320.26 Aligned_cols=242 Identities=24% Similarity=0.372 Sum_probs=200.5
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
++.+..++|++.+.||+|+||.||+|.+.+++.||+|+++... ...+.+.+|++++++++||||+++++++.. +..++
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence 4455668999999999999999999998888899999987543 345788999999999999999999999874 45799
Q ss_pred EEecccCCCHHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 292 VLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
||||+++++|.+++....+ .+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||++.....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999999999865322 6899999999999999999999 99999999999999999999999999999987754
Q ss_pred CC------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhccccc
Q 041491 371 KE------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPISV 435 (467)
Q Consensus 371 ~~------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~~ 435 (467)
.. ...+..|.+||...++.++.++||||||+++|||++ |+.||.+....+ ...... ..+++.+
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l 239 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYRMVRPDNCPEEL 239 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCCCCCCTTCCHHH
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHHHhcccCCCCcccccHHH
Confidence 32 223456899999988889999999999999999999 999997643222 112211 2345568
Q ss_pred ccccccccccchhHHHHHHHHHHHHH
Q 041491 436 MNVVDTSLLRREDKYFAAKKQCVSSA 461 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~~~~~~~~~l 461 (467)
.+++.+|+..+|.+|+ ++.+++..+
T Consensus 240 ~~li~~~l~~~p~~Rp-s~~~l~~~l 264 (279)
T 1qpc_A 240 YQLMRLCWKERPEDRP-TFDYLRSVL 264 (279)
T ss_dssp HHHHHHHTCSSGGGSC-CHHHHHHHH
T ss_pred HHHHHHHhccChhhCC-CHHHHHHHH
Confidence 9999999999999996 444544444
No 119
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=9e-41 Score=319.22 Aligned_cols=235 Identities=26% Similarity=0.331 Sum_probs=190.4
Q ss_pred HHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc-----cchHHHHHHHHHHHcCC---CCCceeEEEEeec
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-----GALKSFDAECEVLKSVR---HRNLVKIISSCSN 285 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~ 285 (467)
...++|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+|+.++++++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 34679999999999999999999975 589999999875421 22356778888887764 9999999999976
Q ss_pred CC-----eeeEEEecccCCCHHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEE
Q 041491 286 GN-----FEALVLEYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHL 359 (467)
Q Consensus 286 ~~-----~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 359 (467)
.. ..++||||++ ++|.+++..... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEE
Confidence 55 5799999997 599998866543 4899999999999999999999 999999999999999999999999
Q ss_pred eccccceecCCCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH---------
Q 041491 360 SDFGIAKLLNGKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW--------- 426 (467)
Q Consensus 360 ~Dfg~a~~~~~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~--------- 426 (467)
+|||+++...... ..++..|.+||...+..++.++|||||||++|||++|+.||......+. +...
T Consensus 162 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~ 240 (308)
T 3g33_A 162 ADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFDLIGLPPE 240 (308)
T ss_dssp CSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH-HHHHHHHHCCCCT
T ss_pred eeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCh
Confidence 9999998765433 2456778999999889999999999999999999999999976432221 1111
Q ss_pred ------------------------HhhhcccccccccccccccchhHHHHHH
Q 041491 427 ------------------------VNDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 427 ------------------------~~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
....+++.+.+++.+||..||.+|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 292 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 292 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHH
Confidence 1123344578899999999999998644
No 120
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-41 Score=327.91 Aligned_cols=244 Identities=25% Similarity=0.311 Sum_probs=203.8
Q ss_pred hccCccCCccCcccceeEEEEEe-----cCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEee--cCCee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRF-----LDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS--NGNFE 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~ 289 (467)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++. +.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 46899999999999999999984 248899999998766566677999999999999999999999886 45678
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
++||||+++++|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999999776667999999999999999999999 9999999999999999999999999999998775
Q ss_pred CCC--------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc----------c---cHHHHHh
Q 041491 370 GKE--------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE----------M---NLKNWVN 428 (467)
Q Consensus 370 ~~~--------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~----------~---~~~~~~~ 428 (467)
... ..++..|.+||...+..++.++||||||+++|||++|+.||.....+. . .......
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 432 124445899999888889999999999999999999999996543211 0 1111111
Q ss_pred --------hhcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 429 --------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 429 --------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
..+++.+.+++.+||..||.+|+ ++.++++.|.++
T Consensus 259 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp-s~~ell~~L~~~ 301 (327)
T 3lxl_A 259 EGQRLPAPPACPAEVHELMKLCWAPSPQDRP-SFSALGPQLDML 301 (327)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHHC
T ss_pred cccCCCCCCcccHHHHHHHHHHcCCChhhCc-CHHHHHHHHHHH
Confidence 13345689999999999999995 677777766554
No 121
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-40 Score=318.07 Aligned_cols=244 Identities=25% Similarity=0.315 Sum_probs=193.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|+++... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 457999999999999999999875 58999999997532 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 293 LEYMANGSLEKCLYS---SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
|||+++++|.+++.. ....+++..++.++.|++.||.||| ++|++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999998854 3456899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCC-----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh---------hhccccc
Q 041491 370 GKE-----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN---------DFLPISV 435 (467)
Q Consensus 370 ~~~-----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~---------~~~~~~~ 435 (467)
... ..++..|.+||...+..++.++||||||+++|||++|+.||.+............. ..+++++
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL 267 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHH
Confidence 432 23566789999998889999999999999999999999999764322222222221 2345568
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 436 MNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
.+++.+||..||.+|+ ++.++++.+.++
T Consensus 268 ~~li~~~l~~dp~~Rp-s~~~il~~l~~l 295 (310)
T 2wqm_A 268 RQLVNMCINPDPEKRP-DVTYVYDVAKRM 295 (310)
T ss_dssp HHHHHHHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCC-CHHHHHHHHHHH
Confidence 9999999999999996 566666665544
No 122
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6.4e-41 Score=340.40 Aligned_cols=246 Identities=21% Similarity=0.337 Sum_probs=207.8
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
++.+..++|++.+.||+|+||.||+|.+.. +..||+|+++... ...+.+.+|+.++++++||||+++++++...+..+
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 292 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEE
Confidence 345566789999999999999999999875 8899999997553 34678999999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 291 LVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
+||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++...
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 9999999999999997643 46899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCC------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHhh--------hcccc
Q 041491 370 GKE------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVND--------FLPIS 434 (467)
Q Consensus 370 ~~~------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~--------~~~~~ 434 (467)
... ...+..|.|||.+..+.++.++|||||||++|||+| |+.||...... ...+.+.. .+++.
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 447 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRMERPEGCPEK 447 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCCCCCCTTCCHH
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCCCCCCCHH
Confidence 432 123456899999988889999999999999999999 99999764332 22233322 23456
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
+.+++.+|+..+|.+|+ ++.++++.|-++
T Consensus 448 l~~li~~cl~~dP~~RP-s~~el~~~L~~~ 476 (495)
T 1opk_A 448 VYELMRACWQWNPSDRP-SFAEIHQAFETM 476 (495)
T ss_dssp HHHHHHHHTCSSGGGSC-CHHHHHHHHHTS
T ss_pred HHHHHHHHcCcChhHCc-CHHHHHHHHHHH
Confidence 88999999999999996 566777666543
No 123
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.2e-41 Score=323.13 Aligned_cols=227 Identities=21% Similarity=0.250 Sum_probs=175.9
Q ss_pred cCccC---CccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCC-CCCceeEEEEeecCCeeeEEE
Q 041491 219 HFSEK---SLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 219 ~y~~~---~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 293 (467)
+|++. +.||+|+||.||+|.+. +++.||+|++... ....+.+|+.+++.+. ||||+++++++.+.+..++||
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 85 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVM 85 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEE
Confidence 45443 78999999999999986 4899999998743 3466789999999997 999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC---cEEEeccccceecCC
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM---VAHLSDFGIAKLLNG 370 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~Dfg~a~~~~~ 370 (467)
||+++|+|.+++... +.+++.++..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||+++....
T Consensus 86 e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 86 ELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp CCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred EccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 999999999999654 57899999999999999999999 99999999999999997765 899999999987654
Q ss_pred CC-----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc-----ccHHHH-----------Hhh
Q 041491 371 KE-----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE-----MNLKNW-----------VND 429 (467)
Q Consensus 371 ~~-----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~-----~~~~~~-----------~~~ 429 (467)
.. ..++..|.+||...+..++.++||||+||++|||++|+.||....... ...... .+.
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (325)
T 3kn6_A 162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK 241 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHH
T ss_pred CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccccc
Confidence 32 234677899999999999999999999999999999999997642211 011111 123
Q ss_pred hcccccccccccccccchhHHHH
Q 041491 430 FLPISVMNVVDTSLLRREDKYFA 452 (467)
Q Consensus 430 ~~~~~~~~~i~~~l~~~~~~r~~ 452 (467)
.+++++.+++.+||..||.+|++
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt 264 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLK 264 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCC
T ss_pred CCCHHHHHHHHHHCCCChhHCCC
Confidence 45667999999999999999975
No 124
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.7e-41 Score=327.77 Aligned_cols=207 Identities=25% Similarity=0.310 Sum_probs=181.1
Q ss_pred cccccHHHHHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCC-----CCCcee
Q 041491 205 WRRFSYQELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-----HRNLVK 278 (467)
Q Consensus 205 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~ 278 (467)
...+++.+.....++|++.+.||+|+||.||+|++. +++.||+|+++.. ....+.+..|+.+++.++ ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 344556666667889999999999999999999985 5899999998743 234466788999999986 999999
Q ss_pred EEEEeecCCeeeEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC----
Q 041491 279 IISSCSNGNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD---- 353 (467)
Q Consensus 279 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---- 353 (467)
+++++...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+|||++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccc
Confidence 999999999999999999 889999987654 36899999999999999999999 999999999999999975
Q ss_pred ---------------------CCcEEEeccccceecCCC--CccccccccccccccCCCCCCcccchhhHHHHHHHhcCC
Q 041491 354 ---------------------DMVAHLSDFGIAKLLNGK--ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKK 410 (467)
Q Consensus 354 ---------------------~~~~kl~Dfg~a~~~~~~--~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~ 410 (467)
++.+||+|||+++..... ...++..|.|||.+.+..++.++|||||||++|||+||+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 256 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCC
Confidence 789999999999876543 335677899999999999999999999999999999999
Q ss_pred CCCCcc
Q 041491 411 KPTCEI 416 (467)
Q Consensus 411 ~Pf~~~ 416 (467)
.||...
T Consensus 257 ~pf~~~ 262 (360)
T 3llt_A 257 LLFRTH 262 (360)
T ss_dssp CSCCCS
T ss_pred CCCCCC
Confidence 999753
No 125
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=320.33 Aligned_cols=231 Identities=24% Similarity=0.221 Sum_probs=189.0
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccccc--chHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG--ALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.++||+|+||+||+|++. +++.||||++...... .......|+..+.++ +||||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 468999999999999999999987 5999999998654322 233445566555554 899999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+ +++|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 9999 66999988777778999999999999999999999 9999999999999999999999999999998775432
Q ss_pred ----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc----ccHHHHHhhhcccccccccccccc
Q 041491 373 ----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE----MNLKNWVNDFLPISVMNVVDTSLL 444 (467)
Q Consensus 373 ----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~ 444 (467)
..++..|.+||+..+ .++.++|||||||++|||++|..|+....... .....-....+++++.+++.+||.
T Consensus 212 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 290 (311)
T 3p1a_A 212 AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLE 290 (311)
T ss_dssp ---CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSC
T ss_pred CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHHcC
Confidence 235778999998875 78999999999999999999977765421110 011112334566779999999999
Q ss_pred cchhHHHH
Q 041491 445 RREDKYFA 452 (467)
Q Consensus 445 ~~~~~r~~ 452 (467)
.||++|++
T Consensus 291 ~dP~~Rpt 298 (311)
T 3p1a_A 291 PDPKLRAT 298 (311)
T ss_dssp SSTTTSCC
T ss_pred CChhhCcC
Confidence 99999975
No 126
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-41 Score=316.27 Aligned_cols=240 Identities=23% Similarity=0.365 Sum_probs=199.8
Q ss_pred hccCccCC-ccCcccceeEEEEEec---CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 217 TDHFSEKS-LIGIGSFGTVYKGRFL---DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 217 ~~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
.++|.+.+ .||+|+||.||+|.+. ++..||+|+++... ....+.+.+|++++++++||||+++++++. .+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEE
Confidence 45677776 9999999999999864 47789999997643 234577899999999999999999999994 556899
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 371 (467)
||||+++++|.+++......+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 99999999999999776678999999999999999999999 999999999999999999999999999999877543
Q ss_pred Cc--------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhcccc
Q 041491 372 ES--------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPIS 434 (467)
Q Consensus 372 ~~--------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~ 434 (467)
.. .++..|.+||...+..++.++||||||+++|||+| |+.||......+ ....+. ..+++.
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i~~~~~~~~~~~~~~~ 241 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGKRMECPPECPPE 241 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHHHTTCCCCCCTTCCHH
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHhcCCcCCCCCCcCHH
Confidence 21 23456899999888889999999999999999999 999997643222 222222 234556
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHh
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
+.+++.+|+..+|.+|+ ++.++++.+.+
T Consensus 242 l~~li~~~l~~~p~~Rp-s~~~l~~~l~~ 269 (287)
T 1u59_A 242 LYALMSDCWIYKWEDRP-DFLTVEQRMRA 269 (287)
T ss_dssp HHHHHHHTTCSSGGGSC-CHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCc-CHHHHHHHHHH
Confidence 89999999999999996 56666665544
No 127
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=319.26 Aligned_cols=236 Identities=25% Similarity=0.283 Sum_probs=192.8
Q ss_pred ccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
++|++.+.||+|+||.||+|++.. |+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 689999999999999999999864 89999999865432 234668899999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC--
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-- 372 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 372 (467)
|+++++|.+++.. .+.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~~l~~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 83 YCDHTVLHELDRY-QRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp CCSEEHHHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhh-hcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999999988754 456899999999999999999999 9999999999999999999999999999998776432
Q ss_pred ---ccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccccH--H----------------------
Q 041491 373 ---SMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL--K---------------------- 424 (467)
Q Consensus 373 ---~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~--~---------------------- 424 (467)
..++..|.+||...+ ..++.++||||+|+++|||+||+.||.+....+... .
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 245667899998865 678999999999999999999999997643221100 0
Q ss_pred ------------HHHhhhcccccccccccccccchhHHHHHHHHHH
Q 041491 425 ------------NWVNDFLPISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 425 ------------~~~~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
......+++.+.+++.+||..||.+|++ +.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~ell 283 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT-CEQLL 283 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCC-HHHHH
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCC-HHHHh
Confidence 0011234445788999999999999985 44443
No 128
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=8.7e-41 Score=314.65 Aligned_cols=237 Identities=24% Similarity=0.317 Sum_probs=196.7
Q ss_pred HhccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
..++|++.+.||+|+||.||+|.+.. ++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 35789999999999999999998864 7899999986542 2235678899999999999999999999999999999
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 371 (467)
||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999988654 46899999999999999999999 999999999999999999999999999998765433
Q ss_pred ---CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH------hhhcccccccccccc
Q 041491 372 ---ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV------NDFLPISVMNVVDTS 442 (467)
Q Consensus 372 ---~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~ 442 (467)
...++..|.+||...+..++.++||||+|+++|||++|+.||......+. ..... ...+++.+.+++.+|
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~ 241 (279)
T 3fdn_A 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRISRVEFTFPDFVTEGARDLISRL 241 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCCCCCTTSCHHHHHHHHHH
T ss_pred cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH-HHHHHhCCCCCCCcCCHHHHHHHHHH
Confidence 23456778999999999999999999999999999999999976432211 11111 122345588999999
Q ss_pred cccchhHHHHHHHHHH
Q 041491 443 LLRREDKYFAAKKQCV 458 (467)
Q Consensus 443 l~~~~~~r~~~~~~~~ 458 (467)
|..+|.+|++ +.|++
T Consensus 242 l~~~p~~Rps-~~e~l 256 (279)
T 3fdn_A 242 LKHNPSQRPM-LREVL 256 (279)
T ss_dssp CCSSGGGSCC-HHHHH
T ss_pred hccChhhCCC-HHHHh
Confidence 9999999975 33433
No 129
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.4e-40 Score=327.24 Aligned_cols=232 Identities=19% Similarity=0.256 Sum_probs=187.5
Q ss_pred ccCccC-CccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHH-cCCCCCceeEEEEeec----CCeee
Q 041491 218 DHFSEK-SLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLK-SVRHRNLVKIISSCSN----GNFEA 290 (467)
Q Consensus 218 ~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~----~~~~~ 290 (467)
++|.+. +.||+|+||.||+|.+. +++.||+|+++.. ..+.+|+.++. ..+||||+++++++.. .+..|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 466665 68999999999999986 4899999998632 45678888874 4589999999998865 56789
Q ss_pred EEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC---CCcEEEeccccce
Q 041491 291 LVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD---DMVAHLSDFGIAK 366 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a~ 366 (467)
+||||+++|+|.+++.... ..+++..+..++.|++.||.||| ++||+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999997653 36899999999999999999999 999999999999999987 7899999999998
Q ss_pred ecCCCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc--cHHHHHh-----------h
Q 041491 367 LLNGKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM--NLKNWVN-----------D 429 (467)
Q Consensus 367 ~~~~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~--~~~~~~~-----------~ 429 (467)
...... ..++..|.+||++.++.++.++|||||||++|||++|+.||........ .....+. .
T Consensus 213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 292 (400)
T 1nxk_A 213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 292 (400)
T ss_dssp ECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTT
T ss_pred ccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccc
Confidence 765432 3457779999999999999999999999999999999999976432221 1212211 2
Q ss_pred hcccccccccccccccchhHHHHHHHHHH
Q 041491 430 FLPISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 430 ~~~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
.+++++.++|.+||..||.+|++ +.|++
T Consensus 293 ~~s~~~~~li~~~L~~dP~~Rpt-~~eil 320 (400)
T 1nxk_A 293 EVSEEVKMLIRNLLKTEPTQRMT-ITEFM 320 (400)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCC-HHHHH
T ss_pred cCCHHHHHHHHHHCCCChhHCcC-HHHHh
Confidence 34556999999999999999985 44443
No 130
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.1e-40 Score=312.62 Aligned_cols=233 Identities=22% Similarity=0.292 Sum_probs=197.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc------cchHHHHHHHHHHHcCCCCCceeEEEEeecCCee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD------GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 289 (467)
.++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467999999999999999999987 589999999875432 1357789999999999999999999999999999
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC----cEEEeccccc
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM----VAHLSDFGIA 365 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~----~~kl~Dfg~a 365 (467)
++||||+++++|.+++... ..+++..+..++.|++.||.||| ++|++||||||+||+++.++ .+||+|||++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999998543 46899999999999999999999 99999999999999998877 8999999999
Q ss_pred eecCCCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHH----------HHhhhc
Q 041491 366 KLLNGKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKN----------WVNDFL 431 (467)
Q Consensus 366 ~~~~~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~----------~~~~~~ 431 (467)
....... ..++..|.+||...+..++.++||||||+++|||++|+.||......+ .... -.....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (283)
T 3bhy_A 160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TLTNISAVNYDFDEEYFSNT 238 (283)
T ss_dssp EECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCCCCCHHHHTTC
T ss_pred eeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HHHHhHhcccCCcchhcccC
Confidence 8775432 245677899999998999999999999999999999999997643221 1111 122345
Q ss_pred ccccccccccccccchhHHHHHH
Q 041491 432 PISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 432 ~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
++.+.+++.+||..||.+|++..
T Consensus 239 ~~~~~~li~~~l~~dp~~Rps~~ 261 (283)
T 3bhy_A 239 SELAKDFIRRLLVKDPKRRMTIA 261 (283)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHH
T ss_pred CHHHHHHHHHHccCCHhHCcCHH
Confidence 56689999999999999998644
No 131
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.9e-41 Score=322.66 Aligned_cols=244 Identities=22% Similarity=0.340 Sum_probs=201.6
Q ss_pred HHHhccCccCCccCcccceeEEEEEec--------CCCeEEEEEeecccc-cchHHHHHHHHHHHcC-CCCCceeEEEEe
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRFL--------DGMEVAIKVFHLQFD-GALKSFDAECEVLKSV-RHRNLVKIISSC 283 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 283 (467)
....++|++.+.||+|+||.||+|++. ++..||+|+++.... ...+.+.+|+++++++ +||||+++++++
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 345689999999999999999999873 367899999975432 3456788999999999 899999999999
Q ss_pred ecCCeeeEEEecccCCCHHHhhhcCCC---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCC
Q 041491 284 SNGNFEALVLEYMANGSLEKCLYSSNG---------------ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSN 348 (467)
Q Consensus 284 ~~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~N 348 (467)
...+..++||||+++|+|.+++..... .+++..++.++.|++.||+||| ++||+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccce
Confidence 999999999999999999999875432 4889999999999999999999 9999999999999
Q ss_pred eeecCCCcEEEeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCcccccc
Q 041491 349 VLLDDDMVAHLSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEE 420 (467)
Q Consensus 349 Ill~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~ 420 (467)
|+++.++.+||+|||+++...... ...+..|.+||...+..++.++||||||+++|||+| |+.||.+....+
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 267 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH
Confidence 999999999999999998765432 223456899999888889999999999999999999 999997643222
Q ss_pred ccHHHHHh--------hhcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 421 MNLKNWVN--------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 421 ~~~~~~~~--------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
....+. ..++..+.+++.+|+..+|.+|+ ++.++++.|.+
T Consensus 268 --~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~ell~~L~~ 315 (334)
T 2pvf_A 268 --LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRP-TFKQLVEDLDR 315 (334)
T ss_dssp --HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred --HHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCc-CHHHHHHHHHH
Confidence 122221 22345689999999999999996 56666665544
No 132
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8.8e-41 Score=314.95 Aligned_cols=241 Identities=20% Similarity=0.310 Sum_probs=197.7
Q ss_pred HhccCccCCccCcccceeEEEEEecC----CCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
..++|++.+.||+|+||.||+|.+.+ +..||+|++.... ....+.+.+|+.++++++||||+++++++.++ ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 45789999999999999999998753 3359999987653 23457789999999999999999999998754 468
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
+||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999999776677999999999999999999999 99999999999999999999999999999987654
Q ss_pred CC------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhccccc
Q 041491 371 KE------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPISV 435 (467)
Q Consensus 371 ~~------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~~ 435 (467)
.. ...+..|.+||...+..++.++||||||+++|||+| |+.||......+ ...... ..+++.+
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l 243 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLEKGDRLPKPDLCPPVL 243 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHHHTCCCCCCTTCCHHH
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHhcCCCCCCCCCCCHHH
Confidence 32 223456899999988899999999999999999998 999997543322 222221 1234458
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHh
Q 041491 436 MNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
.+++.+||..+|.+|+ ++.+++..|.+
T Consensus 244 ~~li~~~l~~~p~~Rp-s~~ell~~L~~ 270 (281)
T 3cc6_A 244 YTLMTRCWDYDPSDRP-RFTELVCSLSD 270 (281)
T ss_dssp HHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred HHHHHHHccCCchhCc-CHHHHHHHHHH
Confidence 9999999999999996 55566555543
No 133
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=323.57 Aligned_cols=231 Identities=23% Similarity=0.297 Sum_probs=188.5
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccccc-chHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG-ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
++|++.+.||+|+||.||+|++. +++.||+|++...... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999986 5899999998754322 223456799999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC---
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--- 372 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~--- 372 (467)
++ |+|.+++......+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 97 5999988777778999999999999999999999 9999999999999999999999999999998665322
Q ss_pred --ccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH-----------------------
Q 041491 373 --SMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW----------------------- 426 (467)
Q Consensus 373 --~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~----------------------- 426 (467)
..++..|.+||...+ ..++.++||||+||++|||++|+.||.+....+. +...
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ-LHFIFRILGTPTEETWPGILSNEEFKT 236 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHhchhhhcchhhcc
Confidence 235777899998765 5689999999999999999999999976432211 1000
Q ss_pred -------------HhhhcccccccccccccccchhHHHHH
Q 041491 427 -------------VNDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 427 -------------~~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
....+++.+.+++.+||..||.+|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 276 (324)
T 3mtl_A 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISA 276 (324)
T ss_dssp TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCH
Confidence 011234457899999999999999853
No 134
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-40 Score=326.78 Aligned_cols=195 Identities=23% Similarity=0.343 Sum_probs=160.9
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCC-CCCceeEEEEeecCC--ee
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVR-HRNLVKIISSCSNGN--FE 289 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~ 289 (467)
..++|++.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+.+++.+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999886 58999999986432 234567789999999997 999999999997544 78
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
|+||||++ ++|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+|+...
T Consensus 87 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 589998865 36899999999999999999999 9999999999999999999999999999998753
Q ss_pred C--------------------------CCccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 370 G--------------------------KESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 370 ~--------------------------~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
. ....++..|.|||.+.+ ..++.++||||+||++|||++|+.||.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2 11246677899998876 67899999999999999999999999753
No 135
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=322.36 Aligned_cols=247 Identities=20% Similarity=0.235 Sum_probs=188.3
Q ss_pred HHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCC-CCCceeEEEEee------
Q 041491 213 LLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCS------ 284 (467)
Q Consensus 213 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~------ 284 (467)
+.+...+|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++++. ||||+++++++.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 3445678999999999999999999986 58999999987665556678899999999996 999999999983
Q ss_pred --cCCeeeEEEecccCCCHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeecCCCcEE
Q 041491 285 --NGNFEALVLEYMANGSLEKCLYS--SNGILDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNVLLDDDMVAH 358 (467)
Q Consensus 285 --~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlkp~NIll~~~~~~k 358 (467)
.....++||||+. |+|.+++.. ..+.+++..++.++.|++.||+||| ++| |+||||||+||+++.++.+|
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEE
Confidence 3446799999996 689888754 3457999999999999999999999 888 99999999999999999999
Q ss_pred EeccccceecCCCC-----------------ccccccccccccc---cCCCCCCcccchhhHHHHHHHhcCCCCCCcccc
Q 041491 359 LSDFGIAKLLNGKE-----------------SMRTQTLATIEYG---REGQVSPKSDVYGYGITLIETFTKKKPTCEIFC 418 (467)
Q Consensus 359 l~Dfg~a~~~~~~~-----------------~~~~~~~~~pe~~---~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~ 418 (467)
|+|||+++...... ..++..|.+||.. .+..++.++|||||||++|||+||+.||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 99999998765422 2256678999987 567788999999999999999999999976432
Q ss_pred ccccHHHH---HhhhcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 419 EEMNLKNW---VNDFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 419 ~~~~~~~~---~~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
.......+ .....+..+.+++.+||..||.+|+ ++.|+++.+.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-s~~e~l~~l~~~ 306 (337)
T 3ll6_A 259 LRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERL-SIAEVVHQLQEI 306 (337)
T ss_dssp -------CCCCTTCCSSGGGHHHHHHHSCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHhhcCcccCCcccccchHHHHHHHHHccCChhhCc-CHHHHHHHHHHH
Confidence 21111111 1122334588999999999999997 677777776554
No 136
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.1e-40 Score=317.70 Aligned_cols=243 Identities=21% Similarity=0.345 Sum_probs=198.0
Q ss_pred hccCccCCccCcccceeEEEEEe-----cCCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecC--Ce
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRF-----LDGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNG--NF 288 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~ 288 (467)
.++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++... +.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 45789999999999999999984 258899999997543 23457789999999999999999999999876 66
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.++||||+++++|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence 89999999999999999777678999999999999999999999 999999999999999999999999999999877
Q ss_pred CCCC--------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccc----------ccccHHHH---H
Q 041491 369 NGKE--------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFC----------EEMNLKNW---V 427 (467)
Q Consensus 369 ~~~~--------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~----------~~~~~~~~---~ 427 (467)
.... ..++..|.+||...+..++.++||||+|+++|||+||+.|+..... ........ .
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL 256 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence 6432 2344558999998888899999999999999999999998753211 11111111 1
Q ss_pred h--------hhcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 428 N--------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 428 ~--------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
. ..+++.+.+++.+||..||.+|+ ++.++++.|.+
T Consensus 257 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~~ll~~L~~ 299 (302)
T 4e5w_A 257 KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRT-SFQNLIEGFEA 299 (302)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSC-CHHHHHHHHHH
T ss_pred hccCCCCCCCCCCHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHH
Confidence 1 23445689999999999999995 55566655543
No 137
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=333.36 Aligned_cols=242 Identities=24% Similarity=0.316 Sum_probs=195.7
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCC--eeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN--FEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv 292 (467)
.++|++.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 4689999999999999999999875 8999999997543 234567889999999999999999999998655 77999
Q ss_pred EecccCCCHHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee----cCCCcEEEeccccce
Q 041491 293 LEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL----DDDMVAHLSDFGIAK 366 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl~Dfg~a~ 366 (467)
|||+++|+|.+++..... .+++..++.++.|++.||+||| ++||+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999865432 3899999999999999999999 9999999999999999 777889999999998
Q ss_pred ecCCCC----ccccccccccccccC--------CCCCCcccchhhHHHHHHHhcCCCCCCccccccccH---HHHHh---
Q 041491 367 LLNGKE----SMRTQTLATIEYGRE--------GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL---KNWVN--- 428 (467)
Q Consensus 367 ~~~~~~----~~~~~~~~~pe~~~~--------~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~---~~~~~--- 428 (467)
...... ..++..|.+||.... ..++.++|||||||++|||+||+.||.......... .....
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp ECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred EccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 876533 235677889998754 567789999999999999999999996532222111 11111
Q ss_pred ----------------------------hhcccccccccccccccchhHHHHHHHHHHHHHH
Q 041491 429 ----------------------------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 429 ----------------------------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
..++..+.+++.+||..||++|+ ++.+++..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~-s~~e~l~~l~ 305 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCW-GFDQFFAETS 305 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSC-CHHHHHHHHH
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhc-cHHHHHHHHH
Confidence 12223477899999999999996 4455555543
No 138
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2e-41 Score=340.49 Aligned_cols=245 Identities=24% Similarity=0.354 Sum_probs=200.7
Q ss_pred HHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 211 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
+.+.+..++|++.+.||+|+||.||+|.+.++..||+|+++... ...+.+.+|++++++++||||+++++++.+ +..+
T Consensus 177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~ 254 (452)
T 1fmk_A 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 254 (452)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceE
Confidence 34456678899999999999999999999888889999997653 345789999999999999999999999876 6689
Q ss_pred EEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 291 LVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
+||||+++|+|.+++.... ..+++.++..++.|++.||+||| ++||+||||||+|||+++++.+||+|||+++...
T Consensus 255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 9999999999999996532 35899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCC------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhcccc
Q 041491 370 GKE------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPIS 434 (467)
Q Consensus 370 ~~~------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~ 434 (467)
... ...+..|.|||....+.++.++|||||||++|||+| |+.||.+....+ ....+. ..+|+.
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~~~~~~~~~~~ 409 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYRMPCPPECPES 409 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCCCCCCTTSCHH
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCCCCCCCCHH
Confidence 322 123456899999988899999999999999999999 999997643322 122221 234456
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHh
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
+.+++.+|+..+|++|+ ++.+++..|-+
T Consensus 410 l~~li~~cl~~dP~~Rp-t~~~l~~~L~~ 437 (452)
T 1fmk_A 410 LHDLMCQCWRKEPEERP-TFEYLQAFLED 437 (452)
T ss_dssp HHHHHHHHTCSSGGGSC-CHHHHHHHHHT
T ss_pred HHHHHHHHccCChhhCc-CHHHHHHHHHH
Confidence 89999999999999996 45566655543
No 139
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.7e-41 Score=315.69 Aligned_cols=233 Identities=27% Similarity=0.332 Sum_probs=191.8
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
.++|.+.+.||+|+||.||+|++. ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 368999999999999999999986 48999999997654 2345788999999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---cCCCcEEEeccccceec
Q 041491 295 YMANGSLEKCLYSS---NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 295 ~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~ 368 (467)
|+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988543 357899999999999999999999 9999999999999999 45678999999999876
Q ss_pred CCC----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh--------hhcccccc
Q 041491 369 NGK----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN--------DFLPISVM 436 (467)
Q Consensus 369 ~~~----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~ 436 (467)
... ...++..|.+||... +.++.++||||||+++|||++|+.||.+....+........ ..+++++.
T Consensus 178 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (285)
T 3is5_A 178 KSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAV 256 (285)
T ss_dssp ---------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHH
T ss_pred CCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHH
Confidence 543 234567789999875 56889999999999999999999999764332221111110 11345688
Q ss_pred cccccccccchhHHHHH
Q 041491 437 NVVDTSLLRREDKYFAA 453 (467)
Q Consensus 437 ~~i~~~l~~~~~~r~~~ 453 (467)
+++.+||..||.+|++.
T Consensus 257 ~li~~~L~~dP~~Rps~ 273 (285)
T 3is5_A 257 DLLKQMLTKDPERRPSA 273 (285)
T ss_dssp HHHHHHTCSCTTTSCCH
T ss_pred HHHHHHccCChhhCcCH
Confidence 99999999999999853
No 140
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=322.92 Aligned_cols=241 Identities=25% Similarity=0.370 Sum_probs=195.8
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCe----EEEEEeecc-cccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GME----VAIKVFHLQ-FDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
.++|++.+.||+|+||.||+|++.. ++. ||+|.+... .....+.+.+|+.++++++||||+++++++..++ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 4689999999999999999998753 554 466666433 2345678999999999999999999999998765 68
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
+|+||+++|+|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999887778999999999999999999999 99999999999999999999999999999987643
Q ss_pred CC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHhh--------hcccc
Q 041491 371 KE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVND--------FLPIS 434 (467)
Q Consensus 371 ~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~--------~~~~~ 434 (467)
.. ...+..|.+||...+..++.++|||||||++|||++ |+.||......+ ....... ..+..
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 247 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGERLPQPPICTID 247 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCCCCCTTBCHH
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCCCCCCccCCHH
Confidence 22 123456899999999999999999999999999999 999998653332 2233222 23445
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
+.+++.+||..||.+|+ ++.|+++.+.++
T Consensus 248 l~~li~~~l~~dp~~Rp-s~~ell~~L~~~ 276 (327)
T 3lzb_A 248 VYMIMRKCWMIDADSRP-KFRELIIEFSKM 276 (327)
T ss_dssp HHHHHHHHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCc-CHHHHHHHHHHH
Confidence 88999999999999995 566777766554
No 141
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.3e-41 Score=321.29 Aligned_cols=252 Identities=19% Similarity=0.288 Sum_probs=205.2
Q ss_pred ccHHHHHHHhccCccCCccCcccceeEEEEEec------CCCeEEEEEeecccc-cchHHHHHHHHHHHcC-CCCCceeE
Q 041491 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFD-GALKSFDAECEVLKSV-RHRNLVKI 279 (467)
Q Consensus 208 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~ 279 (467)
+...++....++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|+.+++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 455667777899999999999999999999852 368899999976533 2346788999999999 69999999
Q ss_pred EEEeecCC-eeeEEEecccCCCHHHhhhcCCCC---------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecC
Q 041491 280 ISSCSNGN-FEALVLEYMANGSLEKCLYSSNGI---------------LDIFQRLSIMIDVALALEYLHFGYSNPVVHCD 343 (467)
Q Consensus 280 ~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~---------------~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 343 (467)
++++...+ ..++||||+++++|.+++...... +++..+..++.|++.||.||| ++||+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence 99987654 589999999999999999765432 889999999999999999999 99999999
Q ss_pred CCCCCeeecCCCcEEEeccccceecCCCCc-------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCc
Q 041491 344 IKPSNVLLDDDMVAHLSDFGIAKLLNGKES-------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCE 415 (467)
Q Consensus 344 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~ 415 (467)
|||+||+++.++.+||+|||+++....... .++..|.+||...+..++.++||||||+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987654321 23456899999988899999999999999999998 9999976
Q ss_pred cccccccHHHHHh-------hhcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 416 IFCEEMNLKNWVN-------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 416 ~~~~~~~~~~~~~-------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
....+........ ...++.+.+++.+||..+|.+|+ ++.+++..+.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~ell~~L~~ 307 (316)
T 2xir_A 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP-TFSELVEHLGN 307 (316)
T ss_dssp CCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred cchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHH
Confidence 4333222222211 22345689999999999999996 55555555543
No 142
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=330.05 Aligned_cols=237 Identities=15% Similarity=0.149 Sum_probs=195.7
Q ss_pred hccCccCCccCcccceeEEEEEecC---------CCeEEEEEeecccccchHHHHHHHHHHHcCCCCCcee---------
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD---------GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVK--------- 278 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 278 (467)
.++|++.+.||+|+||.||+|++.. ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 4689999999999999999998864 789999998744 46889999999999999887
Q ss_pred ------EEEEeec-CCeeeEEEecccCCCHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCee
Q 041491 279 ------IISSCSN-GNFEALVLEYMANGSLEKCLYSS-NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVL 350 (467)
Q Consensus 279 ------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIl 350 (467)
+++++.. .+..++||||+ +++|.+++... ...+++.++..++.|++.||+||| ++||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 6777765 77889999999 99999999765 357999999999999999999999 999999999999999
Q ss_pred ecCCC--cEEEeccccceecCCCC------------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 351 LDDDM--VAHLSDFGIAKLLNGKE------------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 351 l~~~~--~~kl~Dfg~a~~~~~~~------------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
++.++ .+||+|||+++.+.... ..++..|.+||...+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 99999999998764321 24566789999998889999999999999999999999999875
Q ss_pred ccccccHHHHHh---h-------------hcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 417 FCEEMNLKNWVN---D-------------FLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 417 ~~~~~~~~~~~~---~-------------~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
............ . .+++.+.+++.+||..||.+|++ +.++++.|.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-~~~l~~~L~~ 333 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPP-YAMLRNNLEA 333 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCC-HHHHHHHHHH
T ss_pred CcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCC-HHHHHHHHHH
Confidence 423222222221 1 23566999999999999999964 6666665544
No 143
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-40 Score=317.51 Aligned_cols=243 Identities=22% Similarity=0.323 Sum_probs=195.0
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcC--CCCCceeEEEEeecC---
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV--RHRNLVKIISSCSNG--- 286 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~--- 286 (467)
.-....++|++.+.||+|+||.||+|++. ++.||+|++... ....+.+|.+++... +||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 33445679999999999999999999885 899999998643 234455666666654 899999999999877
Q ss_pred -CeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC--------CceecCCCCCCeeecCCCcE
Q 041491 287 -NFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN--------PVVHCDIKPSNVLLDDDMVA 357 (467)
Q Consensus 287 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~--------~ivH~dlkp~NIll~~~~~~ 357 (467)
+..++||||+++|+|.+++... .+++..++.++.|++.||+||| ++ ||+||||||+||+++.++.+
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 7889999999999999999654 5899999999999999999999 77 99999999999999999999
Q ss_pred EEeccccceecCCCC---------ccccccccccccccCCCCCCc------ccchhhHHHHHHHhcC----------CCC
Q 041491 358 HLSDFGIAKLLNGKE---------SMRTQTLATIEYGREGQVSPK------SDVYGYGITLIETFTK----------KKP 412 (467)
Q Consensus 358 kl~Dfg~a~~~~~~~---------~~~~~~~~~pe~~~~~~~~~~------~Dv~slGvil~el~tg----------~~P 412 (467)
||+|||+++...... ..++..|.+||...+...+.+ +|||||||++|||+|| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 999999998764322 246778899999887766665 9999999999999999 777
Q ss_pred CCccccccccHHHHHh-----------------hhcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 413 TCEIFCEEMNLKNWVN-----------------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 413 f~~~~~~~~~~~~~~~-----------------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
|............... ...++.+.+++.+||..||.+|+ ++.++++.|.++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp-s~~ell~~L~~l 329 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRL-TALRVKKTLAKM 329 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSC-CHHHHHHHHHHH
T ss_pred HhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCC-CHHHHHHHHHHH
Confidence 7654333333322211 12233478899999999999997 566777666554
No 144
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.1e-41 Score=322.91 Aligned_cols=238 Identities=22% Similarity=0.285 Sum_probs=189.3
Q ss_pred HHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeee
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEA 290 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 290 (467)
....++|++.+.||+|+||.||+|++. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 345678999999999999999999876 589999999975432 23456779999999999999999999999999999
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeec-----CCCcEEEeccccc
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLD-----DDMVAHLSDFGIA 365 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-----~~~~~kl~Dfg~a 365 (467)
+||||+++ +|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++ .++.+||+|||++
T Consensus 110 lv~e~~~~-~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCSE-EHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 99999975 999988654 46899999999999999999999 99999999999999994 4556999999999
Q ss_pred eecCCCC-----ccccccccccccccCC-CCCCcccchhhHHHHHHHhcCCCCCCccccccc------------------
Q 041491 366 KLLNGKE-----SMRTQTLATIEYGREG-QVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM------------------ 421 (467)
Q Consensus 366 ~~~~~~~-----~~~~~~~~~pe~~~~~-~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~------------------ 421 (467)
+...... ..++..|.+||.+.+. .++.++|||||||++|||++|+.||......+.
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred cccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhh
Confidence 8765322 2346778999988764 589999999999999999999999975422111
Q ss_pred -----------------cHHHHHhhhcccccccccccccccchhHHHHHHHHH
Q 041491 422 -----------------NLKNWVNDFLPISVMNVVDTSLLRREDKYFAAKKQC 457 (467)
Q Consensus 422 -----------------~~~~~~~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~ 457 (467)
.+.......+++++.+++.+||..||.+|++ +.|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-~~e~ 316 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRIS-AKNA 316 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCC-HHHH
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCC-HHHH
Confidence 1122233335566889999999999999985 3343
No 145
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=321.93 Aligned_cols=241 Identities=24% Similarity=0.403 Sum_probs=194.9
Q ss_pred HhccCccCCccCcccceeEEEEEecC-----CCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEeecCCee
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD-----GMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 289 (467)
..++|++.+.||+|+||.||+|.+.. +..||+|+++.... .....+.+|+.++++++||||+++++++...+..
T Consensus 42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 34678888999999999999998753 23599999975532 3445788999999999999999999999999999
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
++||||+++++|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++...
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 9999999999999999877778999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCCc--------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHhh--------hcc
Q 041491 370 GKES--------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVND--------FLP 432 (467)
Q Consensus 370 ~~~~--------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~--------~~~ 432 (467)
.... ..+..|.+||......++.++||||||+++|||++ |+.||......+ ....+.. .++
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~ 276 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKAINDGFRLPTPMDCP 276 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTCCCCCCTTCB
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHCCCcCCCcccCC
Confidence 4321 22446899999988899999999999999999999 999997643221 2222211 234
Q ss_pred cccccccccccccchhHHHHHHHHHHHHHH
Q 041491 433 ISVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 433 ~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
+.+.+++.+||..+|.+|+ ++.+++..|.
T Consensus 277 ~~l~~li~~~l~~~p~~Rp-s~~~l~~~L~ 305 (333)
T 1mqb_A 277 SAIYQLMMQCWQQERARRP-KFADIVSILD 305 (333)
T ss_dssp HHHHHHHHHHTCSSTTTSC-CHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCc-CHHHHHHHHH
Confidence 5689999999999999996 3445544443
No 146
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2e-41 Score=325.70 Aligned_cols=250 Identities=22% Similarity=0.339 Sum_probs=206.6
Q ss_pred ccHHHHHHHhccCccCCccCcccceeEEEEEec------CCCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEE
Q 041491 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKII 280 (467)
Q Consensus 208 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~ 280 (467)
+..+++.+..++|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344556677889999999999999999999865 267899999875432 3345688999999999999999999
Q ss_pred EEeecCCeeeEEEecccCCCHHHhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee
Q 041491 281 SSCSNGNFEALVLEYMANGSLEKCLYSSN---------GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL 351 (467)
Q Consensus 281 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll 351 (467)
+++.+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEE
Confidence 99999999999999999999999986532 35689999999999999999999 9999999999999999
Q ss_pred cCCCcEEEeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccH
Q 041491 352 DDDMVAHLSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNL 423 (467)
Q Consensus 352 ~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~ 423 (467)
+.++.+||+|||+++...... ..++..|.+||...++.++.++||||||+++|||+| |+.||......+ .
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~ 249 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--V 249 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--H
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH--H
Confidence 999999999999998654322 123456899999988889999999999999999999 899997643221 1
Q ss_pred HHHH-h-------hhcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 424 KNWV-N-------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 424 ~~~~-~-------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
...+ . ..+++.+.+++.+||..+|.+|+ ++.+++..|.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~e~l~~L~~ 296 (322)
T 1p4o_A 250 LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRP-SFLEIISSIKE 296 (322)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHGG
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCc-CHHHHHHHHHH
Confidence 1221 1 23345688999999999999996 67777777654
No 147
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.6e-41 Score=351.41 Aligned_cols=235 Identities=19% Similarity=0.222 Sum_probs=198.7
Q ss_pred HHHhccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCe
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNF 288 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 288 (467)
....++|++.+.||+|+||.||+|++.. ++.||+|+++... ....+.+..|..++..+ +||+|+++++++.+.+.
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 3456789999999999999999999864 8889999997542 33456788899999988 69999999999999999
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.|+||||+++|+|.+++... +.+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+..
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 99999999999999998654 46899999999999999999999 999999999999999999999999999999864
Q ss_pred CCC-----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhccccccc
Q 041491 369 NGK-----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMN 437 (467)
Q Consensus 369 ~~~-----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~ 437 (467)
... ...++..|.|||++....++.++|||||||++|||++|+.||.+....+ .+..... ..+++++.+
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~~~~p~~~s~~~~~ 571 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIMEHNVAYPKSMSKEAVA 571 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHSSCCCCCTTSCHHHHH
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH-HHHHHHhCCCCCCccCCHHHHH
Confidence 322 2346778999999999999999999999999999999999998643222 1222221 234556999
Q ss_pred ccccccccchhHHHHH
Q 041491 438 VVDTSLLRREDKYFAA 453 (467)
Q Consensus 438 ~i~~~l~~~~~~r~~~ 453 (467)
+|.++|.+||.+|++.
T Consensus 572 li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 572 ICKGLMTKHPGKRLGC 587 (674)
T ss_dssp HHHHHSCSSSTTCTTC
T ss_pred HHHHHccCCHHHCCCC
Confidence 9999999999999865
No 148
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-40 Score=314.96 Aligned_cols=241 Identities=22% Similarity=0.373 Sum_probs=196.0
Q ss_pred cCccCCccCcccceeEEEEEecC-C---CeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEeecCCee-eEE
Q 041491 219 HFSEKSLIGIGSFGTVYKGRFLD-G---MEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE-ALV 292 (467)
Q Consensus 219 ~y~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv 292 (467)
.|+..+.||+|+||.||+|.+.+ + ..||+|++..... ...+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 46667999999999999998753 2 3699999875433 3457788999999999999999999999866654 999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC-
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK- 371 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 371 (467)
|||+.+|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999876778999999999999999999999 999999999999999999999999999999865432
Q ss_pred --------CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhh--------hccccc
Q 041491 372 --------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVND--------FLPISV 435 (467)
Q Consensus 372 --------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~--------~~~~~~ 435 (467)
....+..|.+||...+..++.++||||||+++|||+||..|+...... ......... .+++.+
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 257 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQGRRLPQPEYCPDSL 257 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHhhcCCCCCCCccchHHH
Confidence 123456788999999999999999999999999999966665432222 223333222 234468
Q ss_pred ccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 436 MNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
.+++.+||..+|.+|+ ++.+++..+.++
T Consensus 258 ~~li~~~l~~~p~~Rp-s~~~ll~~l~~~ 285 (298)
T 3pls_A 258 YQVMQQCWEADPAVRP-TFRVLVGEVEQI 285 (298)
T ss_dssp HHHHHHHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCc-CHHHHHHHHHHH
Confidence 9999999999999996 566666666543
No 149
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.1e-40 Score=317.92 Aligned_cols=233 Identities=21% Similarity=0.285 Sum_probs=195.5
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEec
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 295 (467)
.++|.+.+.||+|+||.||+|++. +|+.||+|+++.......+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 468999999999999999999986 5899999999865444556788999999999999999999999999999999999
Q ss_pred ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---cCCCcEEEeccccceecCCCC
Q 041491 296 MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 296 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
+++++|.+++... +.+++..+..++.|++.||.||| ++||+||||||+||++ ++++.+||+|||++.......
T Consensus 88 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 163 (304)
T 2jam_A 88 VSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163 (304)
T ss_dssp CCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT
T ss_pred CCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc
Confidence 9999999988543 46899999999999999999999 9999999999999999 788899999999998655432
Q ss_pred ---ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh----------hhccccccccc
Q 041491 373 ---SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN----------DFLPISVMNVV 439 (467)
Q Consensus 373 ---~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~----------~~~~~~~~~~i 439 (467)
..++..|.+||...+..++.++||||+|+++|||++|+.||......+ ....... ..+++.+.+++
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li 242 (304)
T 2jam_A 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKIKEGYYEFESPFWDDISESAKDFI 242 (304)
T ss_dssp THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHCCCCCCTTTTTTSCHHHHHHH
T ss_pred cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCCccccccCCHHHHHHH
Confidence 235677899999999999999999999999999999999997643221 1111111 23455689999
Q ss_pred ccccccchhHHHHHH
Q 041491 440 DTSLLRREDKYFAAK 454 (467)
Q Consensus 440 ~~~l~~~~~~r~~~~ 454 (467)
.+||..||.+|++..
T Consensus 243 ~~~l~~dp~~Rps~~ 257 (304)
T 2jam_A 243 CHLLEKDPNERYTCE 257 (304)
T ss_dssp HHHHCSSTTTSCCHH
T ss_pred HHHcCCChhHCcCHH
Confidence 999999999998643
No 150
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.8e-40 Score=315.09 Aligned_cols=240 Identities=21% Similarity=0.264 Sum_probs=193.3
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEe-ecCCeeeEEE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSC-SNGNFEALVL 293 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~ 293 (467)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+|+++++.++|++++..+..+ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 3578999999999999999999974 58999999876543 235688999999999987766665554 6778889999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---cCCCcEEEeccccceecCC
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~ 370 (467)
||+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||++ ++++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 99999999766678999999999999999999999 9999999999999999 7889999999999987654
Q ss_pred C------------CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc--cHHHH----------
Q 041491 371 K------------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM--NLKNW---------- 426 (467)
Q Consensus 371 ~------------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~--~~~~~---------- 426 (467)
. ...++..|.+||...+..++.++|||||||++|||++|+.||........ .....
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh
Confidence 3 22457778999999998999999999999999999999999986432211 11111
Q ss_pred -HhhhcccccccccccccccchhHHHHHHHHHHHHHH
Q 041491 427 -VNDFLPISVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 427 -~~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
....+|+.+.+++.+|+..+|++|+ ++.++++.+.
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rp-t~~~l~~~l~ 276 (296)
T 4hgt_A 241 VLCKGYPSEFATYLNFCRSLRFDDKP-DYSYLRQLFR 276 (296)
T ss_dssp HHTTTSCHHHHHHHHHHHTSCTTCCC-CHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHhcCCCCCC-CHHHHHHHHH
Confidence 1134466799999999999999996 3444444443
No 151
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.6e-41 Score=337.22 Aligned_cols=193 Identities=22% Similarity=0.252 Sum_probs=164.7
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecC------C
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNG------N 287 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 287 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999886 48999999997542 33456788999999999999999999999654 3
Q ss_pred eeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 288 FEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 56999999976 46665532 4899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 368 LNGKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 368 ~~~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
..... ..++..|.|||.+.+..++.++||||+||++|||++|+.||.+.
T Consensus 214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 214 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp ---CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 76432 34677899999999999999999999999999999999999764
No 152
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.2e-40 Score=312.79 Aligned_cols=232 Identities=25% Similarity=0.309 Sum_probs=197.5
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|++.. ++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 4689999999999999999999864 7889999986542 22346788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC-
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK- 371 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 371 (467)
|||+++++|.+++... +.+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999998654 46899999999999999999999 999999999999999999999999999999766542
Q ss_pred --CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhccccccccccccc
Q 041491 372 --ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVDTSL 443 (467)
Q Consensus 372 --~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~l 443 (467)
...++..|.+||...+..++.++||||||+++|||++|+.||......+ ....... ..+++.+.+++.+||
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l 247 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-THRRIVNVDLKFPPFLSDGSKDLISKLL 247 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCCCCCTTSCHHHHHHHHHHS
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-HHHHHhccccCCCCcCCHHHHHHHHHHh
Confidence 2345778899999999999999999999999999999999997643222 1111111 234556899999999
Q ss_pred ccchhHHHHH
Q 041491 444 LRREDKYFAA 453 (467)
Q Consensus 444 ~~~~~~r~~~ 453 (467)
..||.+|++.
T Consensus 248 ~~~p~~Rps~ 257 (284)
T 2vgo_A 248 RYHPPQRLPL 257 (284)
T ss_dssp CSSGGGSCCH
T ss_pred hcCHhhCCCH
Confidence 9999999853
No 153
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7e-41 Score=324.89 Aligned_cols=233 Identities=23% Similarity=0.301 Sum_probs=190.7
Q ss_pred HhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccc--cchHHHHHHHHHHHcCCC--CCceeEEEEeecCCeeeE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRH--RNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~l 291 (467)
..++|++.+.||+|+||.||+|.+.+++.||+|++..... ...+.+.+|+.++++++| |||+++++++...+..++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 3568999999999999999999998899999999975432 334678899999999986 999999999999999999
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 371 (467)
||| +.+++|.+++... ..+++.++..++.|++.||+||| ++||+||||||+|||++ ++.+||+|||+++.....
T Consensus 87 v~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EEC-CCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EEe-CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 999 5688999999654 56899999999999999999999 99999999999999997 578999999999876533
Q ss_pred C-------ccccccccccccccC-----------CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhhh---
Q 041491 372 E-------SMRTQTLATIEYGRE-----------GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVNDF--- 430 (467)
Q Consensus 372 ~-------~~~~~~~~~pe~~~~-----------~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~--- 430 (467)
. ..++..|.+||+..+ ..++.++|||||||++|||++|+.||.........+.......
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 240 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI 240 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCccc
Confidence 2 246778899998754 6788999999999999999999999976433222222322211
Q ss_pred -----cccccccccccccccchhHHHHHH
Q 041491 431 -----LPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 431 -----~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
.+..+.+++.+||..||.+|++..
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~ 269 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIP 269 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHH
Confidence 123488999999999999998543
No 154
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.5e-40 Score=314.12 Aligned_cols=239 Identities=21% Similarity=0.246 Sum_probs=196.5
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEE-eecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISS-CSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~-~~~~~~~~lv~e 294 (467)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ..+.+.+|+.+++.++|++++..+.+ ....+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 468999999999999999999974 58999999987543 23568899999999998876655554 467788899999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---cCCCcEEEeccccceecCCC
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 371 (467)
|+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||++ ++++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 89999999766678999999999999999999999 9999999999999999 48889999999999876543
Q ss_pred C------------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc--ccHHHH-----------
Q 041491 372 E------------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE--MNLKNW----------- 426 (467)
Q Consensus 372 ~------------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~--~~~~~~----------- 426 (467)
. ..++..|.+||...+..++.++|||||||++|||++|+.||....... ..+...
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 241 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHH
Confidence 2 245677899999999999999999999999999999999998643221 111111
Q ss_pred HhhhcccccccccccccccchhHHHHHHHHHHHHHH
Q 041491 427 VNDFLPISVMNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 427 ~~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
....+|+.+.+++.+||..||.+|+ ++.++++.+.
T Consensus 242 ~~~~~~~~l~~li~~~l~~dp~~Rp-s~~~l~~~l~ 276 (296)
T 3uzp_A 242 LCKGYPSEFATYLNFCRSLRFDDKP-DYSYLRQLFR 276 (296)
T ss_dssp HTTTSCHHHHHHHHHHHTSCTTCCC-CHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHhcCcCcCC-CHHHHHHHHH
Confidence 1134566799999999999999996 4455555443
No 155
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2e-40 Score=315.17 Aligned_cols=242 Identities=24% Similarity=0.378 Sum_probs=196.1
Q ss_pred hccCccCCccCcccceeEEEEEecC----CCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEe-ecCCeee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSC-SNGNFEA 290 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~ 290 (467)
..+|++.+.||+|+||.||+|.+.+ ...||+|.+..... ...+.+.+|+.++++++||||+++++++ ..++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 4578899999999999999998753 23589998875432 3456789999999999999999999985 4566889
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
+||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999999877778899999999999999999999 99999999999999999999999999999986643
Q ss_pred CC---------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHH-------hhhccc
Q 041491 371 KE---------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWV-------NDFLPI 433 (467)
Q Consensus 371 ~~---------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~-------~~~~~~ 433 (467)
.. ..++..|.+||...+..++.++||||+|+++|||++ |.+||......+ ...... ...+++
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 259 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEYCPD 259 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-HHHHHHTTCCCCCCTTCCH
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-HHHHHhcCCCCCCCccCCH
Confidence 22 223456889999988899999999999999999999 555665432222 111121 122345
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 434 SVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 434 ~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
.+.+++.+||..+|.+|+ ++.++++.|.+
T Consensus 260 ~l~~li~~~l~~~p~~Rp-s~~ell~~L~~ 288 (298)
T 3f66_A 260 PLYEVMLKCWHPKAEMRP-SFSELVSRISA 288 (298)
T ss_dssp HHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCc-CHHHHHHHHHH
Confidence 689999999999999995 56666666554
No 156
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-40 Score=334.67 Aligned_cols=187 Identities=24% Similarity=0.351 Sum_probs=153.0
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeec-----CCe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSN-----GNF 288 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~ 288 (467)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+++.+|+++++.++||||+++++++.. .+.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 368999999999999999999886 58999999986543 2345678899999999999999999999843 357
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.|+||||+ +++|.+++.. ...+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 5699998854 457999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCC--------------------------------ccccccccccccc-cCCCCCCcccchhhHHHHHHHhc
Q 041491 369 NGKE--------------------------------SMRTQTLATIEYG-REGQVSPKSDVYGYGITLIETFT 408 (467)
Q Consensus 369 ~~~~--------------------------------~~~~~~~~~pe~~-~~~~~~~~~Dv~slGvil~el~t 408 (467)
.... ..++..|.|||++ ....++.++|||||||++|||+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 4221 1346678999975 56779999999999999999999
No 157
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.1e-41 Score=325.07 Aligned_cols=231 Identities=23% Similarity=0.333 Sum_probs=191.0
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeEEE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 293 (467)
..++|++.+.||+|+||.||+|.++ +++.||+|+++.... ...+|++++.++ +||||+++++++.+.+..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3578999999999999999999986 489999999975532 345788888887 7999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC----CcEEEeccccceecC
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD----MVAHLSDFGIAKLLN 369 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~a~~~~ 369 (467)
||+++|+|.+++.. .+.+++..+..++.|++.||+||| ++||+||||||+||++.++ +.+||+|||+++...
T Consensus 96 E~~~gg~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILR-QKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHT-CTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 99999999998854 456899999999999999999999 9999999999999998443 359999999998765
Q ss_pred CCC-----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc-ccHHHHH-----------hhhcc
Q 041491 370 GKE-----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE-MNLKNWV-----------NDFLP 432 (467)
Q Consensus 370 ~~~-----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~-~~~~~~~-----------~~~~~ 432 (467)
... ..++..|.|||...+..++.++|||||||++|||++|+.||.....+. ..+.... +..++
T Consensus 172 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s 251 (342)
T 2qr7_A 172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251 (342)
T ss_dssp CTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSC
T ss_pred CCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCC
Confidence 432 235677889998887778999999999999999999999997532111 1111111 12355
Q ss_pred cccccccccccccchhHHHHHH
Q 041491 433 ISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 433 ~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
+.+.+++.+||..||.+|++..
T Consensus 252 ~~~~~li~~~L~~dP~~R~t~~ 273 (342)
T 2qr7_A 252 DTAKDLVSKMLHVDPHQRLTAA 273 (342)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHHHHHHCCCChhHCcCHH
Confidence 6689999999999999998644
No 158
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-41 Score=328.19 Aligned_cols=241 Identities=23% Similarity=0.377 Sum_probs=190.6
Q ss_pred ccCccCCccCcccceeEEEEEecC----CCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEee-cCCeeeE
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCS-NGNFEAL 291 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~l 291 (467)
..|++.+.||+|+||.||+|.+.+ +..||+|.++... ....+.+.+|+.++++++||||+++++++. ..+..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 357778999999999999998743 2468999986543 234578899999999999999999999865 4567899
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 371 (467)
||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||+++.....
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999999877777899999999999999999999 999999999999999999999999999999866432
Q ss_pred C---------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhccc
Q 041491 372 E---------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPI 433 (467)
Q Consensus 372 ~---------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~ 433 (467)
. ...+..|.+||...+..++.++|||||||++|||+| |.+||...... ....... ..+++
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~~~~~~~p~~~~~ 323 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPD 323 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHTTCCCCCCTTCCH
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHcCCCCCCCCCCCH
Confidence 1 223456899999988999999999999999999999 67778654322 2222222 22455
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 434 SVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 434 ~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
.+.+++.+|+..+|++|+ ++.++++.|.++
T Consensus 324 ~l~~li~~cl~~dp~~RP-s~~ell~~L~~i 353 (373)
T 3c1x_A 324 PLYEVMLKCWHPKAEMRP-SFSELVSRISAI 353 (373)
T ss_dssp HHHHHHHHHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCc-CHHHHHHHHHHH
Confidence 689999999999999996 566666666543
No 159
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-41 Score=325.51 Aligned_cols=238 Identities=21% Similarity=0.265 Sum_probs=193.9
Q ss_pred hccCccCCccCcccceeEEEEEec----CCCeEEEEEeeccc----ccchHHHHHHHHHHHcC-CCCCceeEEEEeecCC
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL----DGMEVAIKVFHLQF----DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGN 287 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 287 (467)
.++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 468999999999999999999883 58999999986532 23345677899999999 6999999999999999
Q ss_pred eeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 288 FEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
..++||||+++++|.+++... ..+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999998654 46899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCC------ccccccccccccccC--CCCCCcccchhhHHHHHHHhcCCCCCCccccccc--cHHHHHh-------hh
Q 041491 368 LNGKE------SMRTQTLATIEYGRE--GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM--NLKNWVN-------DF 430 (467)
Q Consensus 368 ~~~~~------~~~~~~~~~pe~~~~--~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~--~~~~~~~-------~~ 430 (467)
..... ..++..|.+||+..+ ..++.++|||||||++|||+||+.||........ .+..... ..
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE 288 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTT
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcc
Confidence 64322 245777899998875 4478999999999999999999999975322211 1111111 12
Q ss_pred cccccccccccccccchhHHHH----HHHHHH
Q 041491 431 LPISVMNVVDTSLLRREDKYFA----AKKQCV 458 (467)
Q Consensus 431 ~~~~~~~~i~~~l~~~~~~r~~----~~~~~~ 458 (467)
++..+.+++.+||..||.+|++ +++|++
T Consensus 289 ~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell 320 (355)
T 1vzo_A 289 MSALAKDLIQRLLMKDPKKRLGCGPRDADEIK 320 (355)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHH
T ss_pred cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHH
Confidence 3345789999999999999983 455554
No 160
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.6e-40 Score=316.41 Aligned_cols=233 Identities=22% Similarity=0.304 Sum_probs=193.7
Q ss_pred HhccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
..++|++.+.||+|+||.||+|.+.. ++.||+|++........+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 35789999999999999999999864 89999999987666667889999999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC-----
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN----- 369 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~----- 369 (467)
|+++++|.+++......+++..+..++.|++.||.||| ++|++||||||+||+++.++.+||+|||++....
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccc
Confidence 99999999998776677999999999999999999999 9999999999999999999999999999875432
Q ss_pred CCCccccccccccccc-----cCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH---------hhhccccc
Q 041491 370 GKESMRTQTLATIEYG-----REGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV---------NDFLPISV 435 (467)
Q Consensus 370 ~~~~~~~~~~~~pe~~-----~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~---------~~~~~~~~ 435 (467)
.....++..|.+||.. ....++.++||||||+++|||++|+.||....... ...... ...++..+
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 252 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDPPTLLTPSKWSVEF 252 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCCCSSGGGSCHHH
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCCcccCCccccCHHH
Confidence 2233467788999987 46778999999999999999999999997643222 111221 12334458
Q ss_pred ccccccccccchhHHHH
Q 041491 436 MNVVDTSLLRREDKYFA 452 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~ 452 (467)
.+++.+||..||.+|++
T Consensus 253 ~~li~~~l~~dp~~Rps 269 (302)
T 2j7t_A 253 RDFLKIALDKNPETRPS 269 (302)
T ss_dssp HHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHcccChhhCCC
Confidence 89999999999999975
No 161
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5e-40 Score=314.85 Aligned_cols=233 Identities=26% Similarity=0.309 Sum_probs=193.4
Q ss_pred HHhccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEE
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 293 (467)
...++|++.+.||+|+||.||+|.+.. |+.||+|++.... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 356789999999999999999999864 8999999987543 3467899999999999999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC--
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK-- 371 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 371 (467)
||+++++|.+++......+++..+..++.|++.||.||| +.|++||||||+||+++.++.+||+|||++......
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 999999999998766668999999999999999999999 999999999999999999999999999999876543
Q ss_pred ---CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH---------hhhccccccccc
Q 041491 372 ---ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV---------NDFLPISVMNVV 439 (467)
Q Consensus 372 ---~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~---------~~~~~~~~~~~i 439 (467)
...++..|.+||...+..++.++||||||+++|||++|+.||......... .... ...+++.+.+++
T Consensus 181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li 259 (314)
T 3com_A 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI-FMIPTNPPPTFRKPELWSDNFTDFV 259 (314)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCCCCCSSGGGSCHHHHHHH
T ss_pred ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhcCCCcccCCcccCCHHHHHHH
Confidence 224566789999999889999999999999999999999999764322111 0110 123455689999
Q ss_pred ccccccchhHHHHH
Q 041491 440 DTSLLRREDKYFAA 453 (467)
Q Consensus 440 ~~~l~~~~~~r~~~ 453 (467)
.+||..||.+|++.
T Consensus 260 ~~~l~~dp~~Rpt~ 273 (314)
T 3com_A 260 KQCLVKSPEQRATA 273 (314)
T ss_dssp HHHTCSCTTTSCCH
T ss_pred HHHccCChhhCcCH
Confidence 99999999999853
No 162
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.1e-40 Score=336.60 Aligned_cols=234 Identities=24% Similarity=0.303 Sum_probs=198.1
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3568999999999999999999986 58999999996542 2345778999999999999999999999999999999
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---cCCCcEEEeccccceec
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~ 368 (467)
||||+.+|+|.+++.. .+.+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||+++..
T Consensus 104 v~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS-RKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EECCCCSCBHHHHHHT-CSCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 9999999999998854 356899999999999999999999 9999999999999999 56789999999999877
Q ss_pred CCCCc----cccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH----------hhhcccc
Q 041491 369 NGKES----MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV----------NDFLPIS 434 (467)
Q Consensus 369 ~~~~~----~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~----------~~~~~~~ 434 (467)
..... .++..|.|||.+.+ .++.++||||+||++|+|++|+.||.+....+ .+.... +..+++.
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~ 257 (484)
T 3nyv_A 180 EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-ILKKVEKGKYTFELPQWKKVSES 257 (484)
T ss_dssp CCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCSGGGGGSCHH
T ss_pred ccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCCCcccccCCHH
Confidence 65432 46778899998765 68999999999999999999999997643221 111111 1234566
Q ss_pred cccccccccccchhHHHHHHH
Q 041491 435 VMNVVDTSLLRREDKYFAAKK 455 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~ 455 (467)
+.+++.+||..+|.+|+++.+
T Consensus 258 ~~~li~~~L~~dp~~R~s~~e 278 (484)
T 3nyv_A 258 AKDLIRKMLTYVPSMRISARD 278 (484)
T ss_dssp HHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHHHHCCCChhHCcCHHH
Confidence 899999999999999986543
No 163
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.6e-41 Score=323.32 Aligned_cols=247 Identities=23% Similarity=0.367 Sum_probs=202.8
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEecC-C-----CeEEEEEeecccc-cchHHHHHHHHHHHcC-CCCCceeEEEEe
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFLD-G-----MEVAIKVFHLQFD-GALKSFDAECEVLKSV-RHRNLVKIISSC 283 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 283 (467)
++....++|++.+.||+|+||.||+|.+.. + ..||+|++..... ...+.+.+|+.+++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 455667899999999999999999998753 2 4799999975532 3456788999999999 899999999999
Q ss_pred ecCCeeeEEEecccCCCHHHhhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCee
Q 041491 284 SNGNFEALVLEYMANGSLEKCLYSS-------------NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVL 350 (467)
Q Consensus 284 ~~~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIl 350 (467)
...+..++||||+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEE
Confidence 9999999999999999999998643 235789999999999999999999 999999999999999
Q ss_pred ecCCCcEEEeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCcccccccc
Q 041491 351 LDDDMVAHLSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMN 422 (467)
Q Consensus 351 l~~~~~~kl~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~ 422 (467)
++.++.+||+|||+++...... ..++..|.+||...+..++.++|||||||++|||+| |..||.+..... .
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~ 275 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-K 275 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-H
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-H
Confidence 9999999999999998664322 223456899999888899999999999999999999 999997643322 1
Q ss_pred HHHHHhh--------hcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 423 LKNWVND--------FLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 423 ~~~~~~~--------~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
....... ..++.+.+++.+||..+|.+|+ ++.+++..|.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-s~~~l~~~L~~ 323 (333)
T 2i1m_A 276 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRP-TFQQICSFLQE 323 (333)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCc-CHHHHHHHHHH
Confidence 2222222 2344588999999999999996 55566655544
No 164
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.1e-40 Score=330.08 Aligned_cols=193 Identities=23% Similarity=0.333 Sum_probs=165.5
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecC-----Ce
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNG-----NF 288 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~ 288 (467)
.++|++.+.||+|+||.||+|++.. ++.||+|++.... ....+++.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 4689999999999999999999864 8899999997543 23456788999999999999999999999766 57
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.|+||||++ ++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999986 599998854 456899999999999999999999 999999999999999999999999999999876
Q ss_pred CCC---------------------------Cccccccccccccc-cCCCCCCcccchhhHHHHHHHhcCCCCCC
Q 041491 369 NGK---------------------------ESMRTQTLATIEYG-REGQVSPKSDVYGYGITLIETFTKKKPTC 414 (467)
Q Consensus 369 ~~~---------------------------~~~~~~~~~~pe~~-~~~~~~~~~Dv~slGvil~el~tg~~Pf~ 414 (467)
... ...++..|.|||.+ ....++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 532 22356778999975 56779999999999999999998655543
No 165
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-40 Score=323.43 Aligned_cols=234 Identities=23% Similarity=0.299 Sum_probs=188.5
Q ss_pred HHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc-----cchHHHHHHHHHHHcCCCCCceeEEEEeecCCe
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-----GALKSFDAECEVLKSVRHRNLVKIISSCSNGNF 288 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 288 (467)
...++|++.+.||+|+||.||+|++. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999986 489999999875322 123568899999999999999999999999999
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.++||||+++ +|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999986 899888776667899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCC-----ccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH----------------
Q 041491 369 NGKE-----SMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW---------------- 426 (467)
Q Consensus 369 ~~~~-----~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~---------------- 426 (467)
.... ..++..|.+||...+ ..++.++|||||||++|||++|.+||.+....+. +...
T Consensus 163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ-LTRIFETLGTPTEEQWPDMC 241 (346)
T ss_dssp TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCTTTSSSTT
T ss_pred cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHcCCCChhhhhhhc
Confidence 5332 345677899998865 4588999999999999999999999976432211 1111
Q ss_pred ------------------HhhhcccccccccccccccchhHHHHH
Q 041491 427 ------------------VNDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 427 ------------------~~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
.....++.+.+++.+||..||.+|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 286 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITA 286 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCH
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCH
Confidence 112334568889999999999999853
No 166
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.3e-40 Score=318.74 Aligned_cols=247 Identities=21% Similarity=0.361 Sum_probs=193.2
Q ss_pred HHHHHHhccCccCCccCcccceeEEEEEecC----CCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEee
Q 041491 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCS 284 (467)
Q Consensus 211 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 284 (467)
.++.+..++|.+.+.||+|+||.||+|.+.. ++.||+|+++... ....+.+.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 3445567899999999999999999998753 4579999987543 234467889999999999999999999997
Q ss_pred cCC-----eeeEEEecccCCCHHHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC
Q 041491 285 NGN-----FEALVLEYMANGSLEKCLYS-----SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD 354 (467)
Q Consensus 285 ~~~-----~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~ 354 (467)
..+ ..++||||+++++|.+++.. ....+++..++.++.|++.||.||| ++||+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCC
Confidence 655 34999999999999998843 3346899999999999999999999 9999999999999999999
Q ss_pred CcEEEeccccceecCCCC-------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHH
Q 041491 355 MVAHLSDFGIAKLLNGKE-------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNW 426 (467)
Q Consensus 355 ~~~kl~Dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~ 426 (467)
+.+||+|||+++...... ...+..|.+||...+..++.++||||||+++|||++ |..||......+ ....
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~ 261 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MYDY 261 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHH
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHHH
Confidence 999999999998764332 223456889999988999999999999999999999 899997643322 2222
Q ss_pred Hh--------hhcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 427 VN--------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 427 ~~--------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
.. ..+++.+.+++.+||..+|.+|+ ++.+++..|.+
T Consensus 262 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~~l~~~L~~ 305 (313)
T 3brb_A 262 LLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRP-TFSVLRLQLEK 305 (313)
T ss_dssp HHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSC-CHHHHHHHHHH
T ss_pred HHcCCCCCCCccccHHHHHHHHHHcCCChhhCc-CHHHHHHHHHH
Confidence 21 22345689999999999999996 55666665544
No 167
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.5e-40 Score=320.33 Aligned_cols=242 Identities=25% Similarity=0.385 Sum_probs=197.2
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCe--EEEEEeeccc-ccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GME--VAIKVFHLQF-DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 291 (467)
.++|++.+.||+|+||.||+|++.. +.. +|+|.++... ....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 3689999999999999999998764 554 4999887532 33456789999999999 89999999999999999999
Q ss_pred EEecccCCCHHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc
Q 041491 292 VLEYMANGSLEKCLYSSN---------------GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV 356 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~ 356 (467)
||||+++++|.+++.... ..+++..++.++.|++.||+||| ++||+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCe
Confidence 999999999999986543 36899999999999999999999 999999999999999999999
Q ss_pred EEEeccccceecCC----CCccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh---
Q 041491 357 AHLSDFGIAKLLNG----KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--- 428 (467)
Q Consensus 357 ~kl~Dfg~a~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--- 428 (467)
+||+|||+++.... .....+..|.+||...+..++.++||||||+++|||+| |+.||......+ ......
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~~~~~ 258 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEKLPQGY 258 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHGGGTC
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--HHHHhhcCC
Confidence 99999999975432 12234556899999888889999999999999999998 999997643221 111111
Q ss_pred -----hhcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 429 -----DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 429 -----~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
..+++.+.+++.+||..+|.+|+ ++.+++..|.++
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~ell~~L~~~ 298 (327)
T 1fvr_A 259 RLEKPLNCDDEVYDLMRQCWREKPYERP-SFAQILVSLNRM 298 (327)
T ss_dssp CCCCCTTBCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCc-CHHHHHHHHHHH
Confidence 12345689999999999999996 566777666543
No 168
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.7e-40 Score=330.60 Aligned_cols=234 Identities=24% Similarity=0.297 Sum_probs=188.3
Q ss_pred HHhccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc--------ccchHHHHHHHHHHHcCCCCCceeEEEEeec
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--------DGALKSFDAECEVLKSVRHRNLVKIISSCSN 285 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 285 (467)
...++|.+.+.||+|+||.||+|.+.. ++.||+|++.... ......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 346799999999999999999998864 8999999997542 1122458899999999999999999999865
Q ss_pred CCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC---cEEEecc
Q 041491 286 GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM---VAHLSDF 362 (467)
Q Consensus 286 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~---~~kl~Df 362 (467)
. ..++||||+++|+|.+++.. .+.+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+||
T Consensus 212 ~-~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 E-DYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp S-EEEEEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred C-ceEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 4 57899999999999998854 457899999999999999999999 99999999999999997544 5999999
Q ss_pred ccceecCCCC----cccccccccccccc---CCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH---------
Q 041491 363 GIAKLLNGKE----SMRTQTLATIEYGR---EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW--------- 426 (467)
Q Consensus 363 g~a~~~~~~~----~~~~~~~~~pe~~~---~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~--------- 426 (467)
|+++...... ..++..|.|||++. ...++.++|||||||++|||+||+.||....... .+...
T Consensus 287 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~~~~~~~~ 365 (419)
T 3i6u_A 287 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYNFI 365 (419)
T ss_dssp STTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHHTTCCCCC
T ss_pred ccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHhcCCCCCC
Confidence 9998776432 24577889999875 3667889999999999999999999997643222 22222
Q ss_pred --HhhhcccccccccccccccchhHHHHHH
Q 041491 427 --VNDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 427 --~~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
....+++.+.+++.+||..||.+|++..
T Consensus 366 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 395 (419)
T 3i6u_A 366 PEVWAEVSEKALDLVKKLLVVDPKARFTTE 395 (419)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred chhhcccCHHHHHHHHHHccCChhHCcCHH
Confidence 2234566799999999999999998643
No 169
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=319.48 Aligned_cols=245 Identities=24% Similarity=0.365 Sum_probs=202.6
Q ss_pred HhccCccCCccCcccceeEEEEEe-----cCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCC--e
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRF-----LDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN--F 288 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~ 288 (467)
..++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+ .
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 356799999999999999999984 258899999998766666678999999999999999999999987654 7
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.++||||+++++|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 89999999999999999877778999999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCc--------cccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccc-------cc-------cHHHH
Q 041491 369 NGKES--------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCE-------EM-------NLKNW 426 (467)
Q Consensus 369 ~~~~~--------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~-------~~-------~~~~~ 426 (467)
..... ..+..|.+||...+..++.++||||||+++|||+||..||.....+ .. .+.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence 54321 2344589999988888899999999999999999999998643111 00 11112
Q ss_pred Hh--------hhcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 427 VN--------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 427 ~~--------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
+. ..+++++.+++.+||..+|.+|+ ++.+++..+-++
T Consensus 276 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~el~~~L~~l 320 (326)
T 2w1i_A 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP-SFRDLALRVDQI 320 (326)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSC-CHHHHHHHHHHH
T ss_pred hhcCCCCCCCCcccHHHHHHHHHHcCCChhhCc-CHHHHHHHHHHH
Confidence 11 22445689999999999999997 566666666543
No 170
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.7e-40 Score=315.82 Aligned_cols=231 Identities=19% Similarity=0.331 Sum_probs=191.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCC-CCCceeEEEEeec--CCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSN--GNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|++. +++.||+|+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 468999999999999999999875 5899999998743 3467899999999997 9999999999987 6678999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC-cEEEeccccceecCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM-VAHLSDFGIAKLLNGK 371 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~-~~kl~Dfg~a~~~~~~ 371 (467)
|||+++++|.+++. .+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||+++.....
T Consensus 112 ~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999874 3789999999999999999999 99999999999999999777 8999999999876543
Q ss_pred C----ccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccccH------------HHHHh------
Q 041491 372 E----SMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNL------------KNWVN------ 428 (467)
Q Consensus 372 ~----~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~------------~~~~~------ 428 (467)
. ..++..|.+||...+ ..++.++|||||||++|||++|+.||.........+ .++..
T Consensus 185 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 264 (330)
T 3nsz_A 185 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 264 (330)
T ss_dssp CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccc
Confidence 2 345667899998876 678999999999999999999999995432211111 11111
Q ss_pred -------------------------hhcccccccccccccccchhHHHHHHHHHH
Q 041491 429 -------------------------DFLPISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 429 -------------------------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
..+++.+.+++.+||..||.+|++ +.|++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-a~e~l 318 (330)
T 3nsz_A 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT-AREAM 318 (330)
T ss_dssp CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCC-HHHHH
T ss_pred ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCC-HHHHh
Confidence 114566889999999999999985 33443
No 171
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.3e-40 Score=322.62 Aligned_cols=242 Identities=20% Similarity=0.237 Sum_probs=193.8
Q ss_pred ccHHHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeeccccc-----------chHHHHHHHHHHHcCCCCCc
Q 041491 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDG-----------ALKSFDAECEVLKSVRHRNL 276 (467)
Q Consensus 208 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~ni 276 (467)
....++....++|++.+.||+|+||.||+|.+.+|+.||+|++...... ..+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 4467788889999999999999999999999888999999998643221 13678999999999999999
Q ss_pred eeEEEEeec-----CCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee
Q 041491 277 VKIISSCSN-----GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL 351 (467)
Q Consensus 277 v~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll 351 (467)
+++++++.. ....++||||++ |+|.+++......+++..+..++.|++.||.||| ++||+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 999999843 346899999997 5888888777678999999999999999999999 9999999999999999
Q ss_pred cCCCcEEEeccccceecCCCC----ccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccc-----
Q 041491 352 DDDMVAHLSDFGIAKLLNGKE----SMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM----- 421 (467)
Q Consensus 352 ~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~----- 421 (467)
+.++.+||+|||+++...... ..++..|.+||...+ ..++.++||||+||++|||++|+.||......+.
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999999999999998654322 245667899998776 6789999999999999999999999976421110
Q ss_pred ------cHH-----------HH---------------HhhhcccccccccccccccchhHHHHH
Q 041491 422 ------NLK-----------NW---------------VNDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 422 ------~~~-----------~~---------------~~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
... ++ .....++.+.+++.+||..||.+|++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 311 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIST 311 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCH
Confidence 000 00 111234458899999999999999854
No 172
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.8e-40 Score=325.86 Aligned_cols=231 Identities=23% Similarity=0.304 Sum_probs=189.6
Q ss_pred hccCccCCccCcccceeEEEEEecCCCeEEEEEeeccc--ccchHHHHHHHHHHHcCC--CCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVR--HRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|.+.+++.||+|++.... ....+.+.+|+.++++++ ||||+++++++...+..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 45699999999999999999998889999999997543 234577899999999996 59999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC-
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK- 371 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 371 (467)
|| +.+++|.+++... ..+++.++..++.|++.||.||| ++||+||||||+|||++ ++.+||+|||+++.+...
T Consensus 135 ~E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EE-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred Ee-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 99 5688999998654 47899999999999999999999 99999999999999996 579999999999876532
Q ss_pred ------CccccccccccccccC-----------CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhhh----
Q 041491 372 ------ESMRTQTLATIEYGRE-----------GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVNDF---- 430 (467)
Q Consensus 372 ------~~~~~~~~~~pe~~~~-----------~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~---- 430 (467)
...++..|.|||++.+ ..++.++|||||||++|||++|+.||.........+.......
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCC
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCC
Confidence 2346778999998754 4688999999999999999999999976432222222222211
Q ss_pred ----cccccccccccccccchhHHHHH
Q 041491 431 ----LPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 431 ----~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
.+..+.+++.+||..||.+|++.
T Consensus 289 ~~~~~~~~~~~li~~~L~~dP~~Rps~ 315 (390)
T 2zmd_A 289 FPDIPEKDLQDVLKCCLKRDPKQRISI 315 (390)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred CCccchHHHHHHHHHHcccChhhCCCH
Confidence 12348899999999999999853
No 173
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.3e-41 Score=317.17 Aligned_cols=244 Identities=23% Similarity=0.327 Sum_probs=198.0
Q ss_pred HHHHHhccCccCC-ccCcccceeEEEEEec---CCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeec
Q 041491 212 ELLLATDHFSEKS-LIGIGSFGTVYKGRFL---DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSN 285 (467)
Q Consensus 212 ~~~~~~~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 285 (467)
++....++|.+.+ .||+|+||.||+|.+. .++.||+|+++.... ...+.+.+|++++++++||||+++++++ .
T Consensus 10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~ 88 (291)
T 1xbb_A 10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 88 (291)
T ss_dssp -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence 3444567888888 9999999999999653 368899999975532 2356789999999999999999999999 5
Q ss_pred CCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccc
Q 041491 286 GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365 (467)
Q Consensus 286 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 365 (467)
.+..++||||+++++|.+++... +.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred CCCcEEEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 56779999999999999999654 46899999999999999999999 999999999999999999999999999999
Q ss_pred eecCCCCc--------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------
Q 041491 366 KLLNGKES--------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN-------- 428 (467)
Q Consensus 366 ~~~~~~~~--------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~-------- 428 (467)
........ ..+..|.+||......++.++||||||+++|||+| |+.||......+ ....+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~ 242 (291)
T 1xbb_A 165 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCP 242 (291)
T ss_dssp EECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCCCCCC
T ss_pred eeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHHcCCCCCCC
Confidence 87754332 12356899999888888999999999999999999 999997643322 222222
Q ss_pred hhcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 429 DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 429 ~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
..+++.+.+++.+||..||.+|+ ++.++++.|-+
T Consensus 243 ~~~~~~l~~li~~~l~~dp~~Rp-s~~~l~~~L~~ 276 (291)
T 1xbb_A 243 AGCPREMYDLMNLCWTYDVENRP-GFAAVELRLRN 276 (291)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSC-CHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChhhCc-CHHHHHHHHHH
Confidence 23455699999999999999996 45555555543
No 174
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.4e-40 Score=318.52 Aligned_cols=232 Identities=26% Similarity=0.314 Sum_probs=190.8
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccccc--chHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDG--ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 293 (467)
.++|++.+.||+|+||.||+|++.. ++.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 4689999999999999999999865 899999998654322 3456789999999999999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC--
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK-- 371 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 371 (467)
||+++++|.++.. ....+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 104 e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 9999999988764 3456899999999999999999999 999999999999999999999999999999876532
Q ss_pred ---CccccccccccccccCC-CCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH---------------------
Q 041491 372 ---ESMRTQTLATIEYGREG-QVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW--------------------- 426 (467)
Q Consensus 372 ---~~~~~~~~~~pe~~~~~-~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~--------------------- 426 (467)
...++..|.+||...+. .++.++||||+||++|||++|+.||......+. +...
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHhhhcccc
Confidence 23456778999988765 789999999999999999999999976432211 1000
Q ss_pred ----------------HhhhcccccccccccccccchhHHHHH
Q 041491 427 ----------------VNDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 427 ----------------~~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
....+++.+.+++.+||..||.+|++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 301 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC 301 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCH
Confidence 112345568899999999999999753
No 175
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.1e-40 Score=318.17 Aligned_cols=239 Identities=23% Similarity=0.321 Sum_probs=196.2
Q ss_pred cCccCCccCcccceeEEEEEec-----CCCeEEEEEeecccc-cchHHHHHHHHHHHcCCCCCceeEEEEeec--CCeee
Q 041491 219 HFSEKSLIGIGSFGTVYKGRFL-----DGMEVAIKVFHLQFD-GALKSFDAECEVLKSVRHRNLVKIISSCSN--GNFEA 290 (467)
Q Consensus 219 ~y~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~ 290 (467)
.|++.+.||+|+||.||++.+. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+ ....+
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 3499999999999999998653 478899999976532 345678999999999999999999999987 46789
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCC
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
+||||+++++|.+++... .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 112 lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999998654 4899999999999999999999 99999999999999999999999999999998764
Q ss_pred CC--------ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc----------c---cHHHHHh-
Q 041491 371 KE--------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE----------M---NLKNWVN- 428 (467)
Q Consensus 371 ~~--------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~----------~---~~~~~~~- 428 (467)
.. ..++..|.+||...+..++.++||||||+++|||+||+.||....... . .......
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 32 124455899999988889999999999999999999999997532211 0 1111111
Q ss_pred -------hhcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 429 -------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 429 -------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
..+++.+.+++.+||..||.+|+ ++.++++.|.+
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp-s~~ell~~L~~ 307 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRP-TFENLIPILKT 307 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCc-CHHHHHHHHHH
Confidence 12445689999999999999996 55566655544
No 176
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.9e-40 Score=334.53 Aligned_cols=233 Identities=22% Similarity=0.281 Sum_probs=195.9
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3468999999999999999999986 58999999996542 23457789999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeec---CCCcEEEeccccceecC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLD---DDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~a~~~~ 369 (467)
|||+++|+|.+.+... +.+++..+..++.|++.||.||| ++||+||||||+||+++ .++.+||+|||+++...
T Consensus 100 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 9999999999988554 46899999999999999999999 99999999999999995 45679999999998765
Q ss_pred CCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH----------hhhccccc
Q 041491 370 GKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV----------NDFLPISV 435 (467)
Q Consensus 370 ~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~----------~~~~~~~~ 435 (467)
... ..++..|.|||.+.+ .++.++||||+||++|+|++|+.||.+....+ .+.... +..+++.+
T Consensus 176 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~ 253 (486)
T 3mwu_A 176 QNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKYAFDLPQWRTISDDA 253 (486)
T ss_dssp CC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCSCSGGGGGSCHHH
T ss_pred CCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCCcccCCCCHHH
Confidence 432 346778999998865 58999999999999999999999997643222 111111 12345568
Q ss_pred ccccccccccchhHHHHHH
Q 041491 436 MNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~~~ 454 (467)
.++|.+||..+|.+|+++.
T Consensus 254 ~~li~~~L~~dp~~R~t~~ 272 (486)
T 3mwu_A 254 KDLIRKMLTFHPSLRITAT 272 (486)
T ss_dssp HHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHHHcCCChhhCcCHH
Confidence 9999999999999998644
No 177
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.4e-40 Score=323.49 Aligned_cols=233 Identities=21% Similarity=0.296 Sum_probs=185.8
Q ss_pred HHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeec-------
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN------- 285 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------- 285 (467)
....++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 456789999999999999999999885 58999999986442 223479999999999999999999843
Q ss_pred -------------------------------CCeeeEEEecccCCCHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHH
Q 041491 286 -------------------------------GNFEALVLEYMANGSLEKCLYS---SNGILDIFQRLSIMIDVALALEYL 331 (467)
Q Consensus 286 -------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~L 331 (467)
....++||||+++ +|.+.+.. ....+++..+..++.|++.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3458899999985 77776642 445799999999999999999999
Q ss_pred hcCCCCCceecCCCCCCeeec-CCCcEEEeccccceecCCCC----ccccccccccccccCC-CCCCcccchhhHHHHHH
Q 041491 332 HFGYSNPVVHCDIKPSNVLLD-DDMVAHLSDFGIAKLLNGKE----SMRTQTLATIEYGREG-QVSPKSDVYGYGITLIE 405 (467)
Q Consensus 332 H~~~~~~ivH~dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~----~~~~~~~~~pe~~~~~-~~~~~~Dv~slGvil~e 405 (467)
| ++||+||||||+||+++ .++.+||+|||+|+...... ..++..|.|||.+.+. .++.++||||+||++||
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 9 99999999999999998 68899999999999765432 3456678999987764 48999999999999999
Q ss_pred HhcCCCCCCccccccc----------------------------------cHHHHHhhhcccccccccccccccchhHHH
Q 041491 406 TFTKKKPTCEIFCEEM----------------------------------NLKNWVNDFLPISVMNVVDTSLLRREDKYF 451 (467)
Q Consensus 406 l~tg~~Pf~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~i~~~l~~~~~~r~ 451 (467)
|++|+.||.+....+. ..........++.+.+++.+||..||.+|+
T Consensus 235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999999976432211 011111222455688999999999999997
Q ss_pred HHH
Q 041491 452 AAK 454 (467)
Q Consensus 452 ~~~ 454 (467)
++.
T Consensus 315 t~~ 317 (383)
T 3eb0_A 315 NPY 317 (383)
T ss_dssp CHH
T ss_pred CHH
Confidence 544
No 178
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-40 Score=323.11 Aligned_cols=232 Identities=21% Similarity=0.267 Sum_probs=186.0
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeecCC------
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGN------ 287 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 287 (467)
.++|++.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 468999999999999999999985 589999999865432 23467889999999999999999999997653
Q ss_pred eeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 288 FEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
..|+||||+ +++|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 8899999865 46899999999999999999999 99999999999999999999999999999998
Q ss_pred cCCC--CccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCcccccccc----------------------
Q 041491 368 LNGK--ESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMN---------------------- 422 (467)
Q Consensus 368 ~~~~--~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~---------------------- 422 (467)
.... ...++..|.|||.+.+ ..++.++||||+||++|||++|+.||.+....+..
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~ 257 (367)
T 1cm8_A 178 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257 (367)
T ss_dssp CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred cccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence 6543 2346778899998876 67899999999999999999999999754221100
Q ss_pred HHHHHh--------------hhcccccccccccccccchhHHHHHH
Q 041491 423 LKNWVN--------------DFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 423 ~~~~~~--------------~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
...+.. ...++.+.+++.+||..||.+|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~ 303 (367)
T 1cm8_A 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG 303 (367)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHH
Confidence 001111 12244588999999999999998543
No 179
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.1e-41 Score=334.73 Aligned_cols=233 Identities=14% Similarity=0.137 Sum_probs=183.9
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecc---cccchHHHHHHHH---HHHcCCCCCceeEE-------EE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQ---FDGALKSFDAECE---VLKSVRHRNLVKII-------SS 282 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~~~-------~~ 282 (467)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+. ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 578999999999999999999975 5999999999743 2334577889995 45556899999998 66
Q ss_pred eecCCe-----------------eeEEEecccCCCHHHhhhcCCC------CCCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 041491 283 CSNGNF-----------------EALVLEYMANGSLEKCLYSSNG------ILDIFQRLSIMIDVALALEYLHFGYSNPV 339 (467)
Q Consensus 283 ~~~~~~-----------------~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~LH~~~~~~i 339 (467)
+...+. .++||||+ +|+|.+++..... .+++..++.++.|++.||+||| ++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 665542 78999999 6799999865321 2335888899999999999999 9999
Q ss_pred eecCCCCCCeeecCCCcEEEeccccceecCCC--CccccccccccccccCC-----------CCCCcccchhhHHHHHHH
Q 041491 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK--ESMRTQTLATIEYGREG-----------QVSPKSDVYGYGITLIET 406 (467)
Q Consensus 340 vH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~~pe~~~~~-----------~~~~~~Dv~slGvil~el 406 (467)
+||||||+|||++.++.+||+|||+|+..... ...+ ..|.|||+..+. .++.++|||||||++|||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 99999999999999999999999999975542 1234 778999998877 899999999999999999
Q ss_pred hcCCCCCCccccccccH-HHHHhhhcccccccccccccccchhHHHHHH
Q 041491 407 FTKKKPTCEIFCEEMNL-KNWVNDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 407 ~tg~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
+||+.||.......... .......+++.+.+++.+||..||.+|++..
T Consensus 307 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~ 355 (377)
T 3byv_A 307 WCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPL 355 (377)
T ss_dssp HHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHH
T ss_pred HHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHH
Confidence 99999997643222110 0001135567799999999999999997543
No 180
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.6e-40 Score=335.42 Aligned_cols=233 Identities=21% Similarity=0.310 Sum_probs=191.7
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 293 (467)
.++|++.+.||+|+||.||+|++. ++..||+|++.... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999986 58899999997543 234577899999999999999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC---CcEEEeccccceecCC
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD---MVAHLSDFGIAKLLNG 370 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~a~~~~~ 370 (467)
||+++|+|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.. +.+||+|||++.....
T Consensus 116 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999999888544 46899999999999999999999 9999999999999999764 4599999999987754
Q ss_pred CC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH----------hhhcccccc
Q 041491 371 KE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV----------NDFLPISVM 436 (467)
Q Consensus 371 ~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~----------~~~~~~~~~ 436 (467)
.. ..++..|.|||.+. +.++.++||||+||++|+|++|+.||.+....+. +.... +..+++.+.
T Consensus 192 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~ 269 (494)
T 3lij_A 192 QKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI-LRKVEKGKYTFDSPEWKNVSEGAK 269 (494)
T ss_dssp TBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCSGGGTTSCHHHH
T ss_pred CccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCchhcccCCHHHH
Confidence 33 34677889999876 5689999999999999999999999976433221 11111 123455688
Q ss_pred cccccccccchhHHHHHHH
Q 041491 437 NVVDTSLLRREDKYFAAKK 455 (467)
Q Consensus 437 ~~i~~~l~~~~~~r~~~~~ 455 (467)
++|.+||..+|.+|+++.+
T Consensus 270 ~li~~~L~~dp~~R~s~~e 288 (494)
T 3lij_A 270 DLIKQMLQFDSQRRISAQQ 288 (494)
T ss_dssp HHHHHHTCSSTTTSCCHHH
T ss_pred HHHHHHCCCChhhCccHHH
Confidence 9999999999999985443
No 181
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=6.7e-41 Score=343.34 Aligned_cols=246 Identities=24% Similarity=0.344 Sum_probs=204.6
Q ss_pred HHHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCee
Q 041491 210 YQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 210 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 289 (467)
.+.+++..++|++.+.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..
T Consensus 259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~ 336 (535)
T 2h8h_A 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 336 (535)
T ss_dssp TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence 344556778899999999999999999999888889999997653 345789999999999999999999999876 678
Q ss_pred eEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 290 ALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +++|+||||||+|||+++++.+||+|||+++..
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 99999999999999996532 35899999999999999999999 999999999999999999999999999999876
Q ss_pred CCC------CccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhccc
Q 041491 369 NGK------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPI 433 (467)
Q Consensus 369 ~~~------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~ 433 (467)
... ....+..|.+||.+..+.++.++|||||||++|||+| |+.||.+....+ ....+. ..+++
T Consensus 414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~~~~~~~~~~ 491 (535)
T 2h8h_A 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYRMPCPPECPE 491 (535)
T ss_dssp CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHHHHTTCCCCCCTTCCH
T ss_pred CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCCCCCCCCH
Confidence 532 2233456899999988899999999999999999999 999997643322 222221 23345
Q ss_pred ccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 434 SVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 434 ~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
.+.+++.+||..||++|+ ++.+++..|.+
T Consensus 492 ~l~~li~~cl~~dP~~RP-t~~~l~~~L~~ 520 (535)
T 2h8h_A 492 SLHDLMCQCWRKEPEERP-TFEYLQAFLED 520 (535)
T ss_dssp HHHHHHHHHTCSSGGGSC-CHHHHHHHHHT
T ss_pred HHHHHHHHHcCCChhHCc-CHHHHHHHHHH
Confidence 689999999999999996 45566555543
No 182
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.9e-40 Score=312.97 Aligned_cols=238 Identities=21% Similarity=0.328 Sum_probs=199.7
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeec---------
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN--------- 285 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--------- 285 (467)
..++|++.+.||+|+||.||+|.+. +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3468999999999999999999986 69999999987543 456789999999999999999998854
Q ss_pred -------CCeeeEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcE
Q 041491 286 -------GNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVA 357 (467)
Q Consensus 286 -------~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~ 357 (467)
....++||||+++++|.+++.... ..+++..++.++.|++.||.||| ++||+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCE
Confidence 445799999999999999996543 46899999999999999999999 9999999999999999999999
Q ss_pred EEeccccceecCCCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh----h
Q 041491 358 HLSDFGIAKLLNGKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN----D 429 (467)
Q Consensus 358 kl~Dfg~a~~~~~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~----~ 429 (467)
||+|||++....... ..++..|.+||...+..++.++||||||+++|||++|..||..... ....... .
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~~~~~~~~ 238 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK---FFTDLRDGIISD 238 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH---HHHHHHTTCCCT
T ss_pred EECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH---HHHHhhcccccc
Confidence 999999998775432 3456778999999888999999999999999999999999854211 1111111 2
Q ss_pred hcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 430 FLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 430 ~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
.+++.+.+++.+||..||.+|+ ++.|++..+..+
T Consensus 239 ~~~~~~~~li~~~l~~dp~~Rp-s~~e~l~~l~~~ 272 (284)
T 2a19_B 239 IFDKKEKTLLQKLLSKKPEDRP-NTSEILRTLTVW 272 (284)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHccCChhhCc-CHHHHHHHHHHH
Confidence 3455688999999999999997 677777776543
No 183
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.3e-40 Score=312.31 Aligned_cols=231 Identities=19% Similarity=0.226 Sum_probs=196.2
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|.+.+.||+|+||.||+|.+.+ ++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 4689999999999999999999874 8899999987543 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+++++|.+++... ..+++.++..++.|++.||+||| ++|++||||||+||+++.++.+||+|||++.......
T Consensus 94 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999988543 46899999999999999999999 9999999999999999999999999999998765322
Q ss_pred -----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhccccccccccc
Q 041491 373 -----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVDT 441 (467)
Q Consensus 373 -----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~~ 441 (467)
..++..|.+||...+..++.++||||+|+++|||++|+.||......+ ....... ..+++.+.+++.+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~ 248 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNEYSIPKHINPVAASLIQK 248 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCCCCCTTSCHHHHHHHHH
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhhccCCCccccCHHHHHHHHH
Confidence 235667899999988889999999999999999999999997643222 1112211 2234458899999
Q ss_pred ccccchhHHHH
Q 041491 442 SLLRREDKYFA 452 (467)
Q Consensus 442 ~l~~~~~~r~~ 452 (467)
||..||.+|++
T Consensus 249 ~l~~~p~~Rps 259 (294)
T 2rku_A 249 MLQTDPTARPT 259 (294)
T ss_dssp HTCSSGGGSCC
T ss_pred HcccChhhCcC
Confidence 99999999974
No 184
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.6e-40 Score=334.80 Aligned_cols=235 Identities=21% Similarity=0.277 Sum_probs=195.0
Q ss_pred HhccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccc-------------cchHHHHHHHHHHHcCCCCCceeEEE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD-------------GALKSFDAECEVLKSVRHRNLVKIIS 281 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~ 281 (467)
..++|++.+.||+|+||.||+|++.. ++.||+|++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35789999999999999999999864 88999999975421 23467889999999999999999999
Q ss_pred EeecCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCC---cEE
Q 041491 282 SCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDM---VAH 358 (467)
Q Consensus 282 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~---~~k 358 (467)
++.+.+..++||||+++|+|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999988554 46899999999999999999999 99999999999999998776 699
Q ss_pred EeccccceecCCCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccccc---------HHH
Q 041491 359 LSDFGIAKLLNGKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMN---------LKN 425 (467)
Q Consensus 359 l~Dfg~a~~~~~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~---------~~~ 425 (467)
|+|||++....... ..++..|.|||.+. +.++.++||||+||++|+|++|+.||.+....+.. ...
T Consensus 190 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~ 268 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF 268 (504)
T ss_dssp ECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH
T ss_pred EEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence 99999998876532 34677889999876 56899999999999999999999999764322210 001
Q ss_pred HHhhhcccccccccccccccchhHHHHHHH
Q 041491 426 WVNDFLPISVMNVVDTSLLRREDKYFAAKK 455 (467)
Q Consensus 426 ~~~~~~~~~~~~~i~~~l~~~~~~r~~~~~ 455 (467)
-.+..+++++.+++.+||..||.+|++..+
T Consensus 269 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~e 298 (504)
T 3q5i_A 269 NDWKNISDEAKELIKLMLTYDYNKRCTAEE 298 (504)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred cccCCCCHHHHHHHHHHcCCChhHCCCHHH
Confidence 122446677999999999999999986443
No 185
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.4e-40 Score=313.07 Aligned_cols=241 Identities=31% Similarity=0.384 Sum_probs=193.4
Q ss_pred HHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecC-CeeeEEE
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNG-NFEALVL 293 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~ 293 (467)
+..++|++.+.||+|+||.||+|++ +|+.||+|+++... ..+.+.+|++++++++||||+++++++... +..++||
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred CChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 3467899999999999999999987 58899999987542 457789999999999999999999987544 5789999
Q ss_pred ecccCCCHHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 294 EYMANGSLEKCLYSSNG-ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
||+++++|.+++..... .+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|||++.......
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 99999999999865432 3789999999999999999999 9999999999999999999999999999998665432
Q ss_pred --ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhccccccccccc
Q 041491 373 --SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPISVMNVVDT 441 (467)
Q Consensus 373 --~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~ 441 (467)
...+..|.+||...+..++.++||||||+++|||+| |+.||...... .....+. ..+++.+.+++.+
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~ 249 (278)
T 1byg_A 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYKMDAPDGCPPAVYEVMKN 249 (278)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTTCCCCCCTTCCHHHHHHHHH
T ss_pred cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCCCCCCcccCCHHHHHHHHH
Confidence 234566899999988899999999999999999998 99999764322 2222221 2345568999999
Q ss_pred ccccchhHHHHHHHHHHHHHHhc
Q 041491 442 SLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 442 ~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
|+..||.+|+ ++.++++.|-++
T Consensus 250 ~l~~~p~~Rp-s~~~l~~~L~~i 271 (278)
T 1byg_A 250 CWHLDAAMRP-SFLQLREQLEHI 271 (278)
T ss_dssp HTCSSGGGSC-CHHHHHHHHHHH
T ss_pred HhcCChhhCC-CHHHHHHHHHHH
Confidence 9999999996 566666655443
No 186
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=311.37 Aligned_cols=233 Identities=27% Similarity=0.342 Sum_probs=191.4
Q ss_pred cCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEeccc
Q 041491 219 HFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMA 297 (467)
Q Consensus 219 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 297 (467)
+|.....||+|+||.||+|.+. +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 4555569999999999999985 488999999987655566789999999999999999999999999999999999999
Q ss_pred CCCHHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC-CCcEEEeccccceecCCC---
Q 041491 298 NGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD-DMVAHLSDFGIAKLLNGK--- 371 (467)
Q Consensus 298 ~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~--- 371 (467)
+++|.+++....+ .+++..+..++.|++.||.||| ++|++||||||+||+++. ++.+||+|||++......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 179 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence 9999999876543 4678899999999999999999 999999999999999987 889999999999876542
Q ss_pred --CccccccccccccccCCC--CCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH--------hhhccccccccc
Q 041491 372 --ESMRTQTLATIEYGREGQ--VSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV--------NDFLPISVMNVV 439 (467)
Q Consensus 372 --~~~~~~~~~~pe~~~~~~--~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~i 439 (467)
...++..|.+||...... ++.++||||||+++|||++|+.||.............. ...+++.+.+++
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 259 (295)
T 2clq_A 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFI 259 (295)
T ss_dssp -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHH
T ss_pred ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHH
Confidence 234567789999876543 78999999999999999999999975432221111111 122345688999
Q ss_pred ccccccchhHHHHHH
Q 041491 440 DTSLLRREDKYFAAK 454 (467)
Q Consensus 440 ~~~l~~~~~~r~~~~ 454 (467)
.+||..||++|++..
T Consensus 260 ~~~l~~dp~~Rps~~ 274 (295)
T 2clq_A 260 LKCFEPDPDKRACAN 274 (295)
T ss_dssp HHTTCSSTTTSCCHH
T ss_pred HHHccCChhhCCCHH
Confidence 999999999998543
No 187
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.9e-40 Score=318.54 Aligned_cols=231 Identities=19% Similarity=0.226 Sum_probs=196.5
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|.+.+.||+|+||.||+|++.+ ++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 4689999999999999999999865 8899999987543 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+++++|.+++... ..+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999988543 46899999999999999999999 9999999999999999999999999999998765322
Q ss_pred -----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhccccccccccc
Q 041491 373 -----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPISVMNVVDT 441 (467)
Q Consensus 373 -----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~i~~ 441 (467)
..++..|.+||...+..++.++||||||+++|||++|+.||......+ ....... ..+++.+.+++.+
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~ 274 (335)
T 2owb_A 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNEYSIPKHINPVAASLIQK 274 (335)
T ss_dssp CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCCCTTSCHHHHHHHHH
T ss_pred ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHhcCCCCCCccCCHHHHHHHHH
Confidence 235667899999988889999999999999999999999997643222 1111111 2234458899999
Q ss_pred ccccchhHHHH
Q 041491 442 SLLRREDKYFA 452 (467)
Q Consensus 442 ~l~~~~~~r~~ 452 (467)
||..||.+|++
T Consensus 275 ~l~~dp~~Rps 285 (335)
T 2owb_A 275 MLQTDPTARPT 285 (335)
T ss_dssp HTCSSGGGSCC
T ss_pred HccCChhHCcC
Confidence 99999999974
No 188
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=7.3e-40 Score=320.20 Aligned_cols=238 Identities=25% Similarity=0.309 Sum_probs=197.6
Q ss_pred HHHHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc--------cchHHHHHHHHHHHcC-CCCCceeEE
Q 041491 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--------GALKSFDAECEVLKSV-RHRNLVKII 280 (467)
Q Consensus 211 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~~~ 280 (467)
.......++|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334455678999999999999999999986 599999999975432 1245678999999999 799999999
Q ss_pred EEeecCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEe
Q 041491 281 SSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLS 360 (467)
Q Consensus 281 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~ 360 (467)
+++...+..++||||+++++|.+++... ..+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEE
Confidence 9999999999999999999999998643 46899999999999999999999 9999999999999999999999999
Q ss_pred ccccceecCCCC----ccccccccccccccC------CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH----
Q 041491 361 DFGIAKLLNGKE----SMRTQTLATIEYGRE------GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW---- 426 (467)
Q Consensus 361 Dfg~a~~~~~~~----~~~~~~~~~pe~~~~------~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~---- 426 (467)
|||++....... ..++..|.+||+..+ ..++.++|||||||++|||+||+.||....... .+...
T Consensus 243 DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~i~~~~ 321 (365)
T 2y7j_A 243 DFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL-MLRMIMEGQ 321 (365)
T ss_dssp CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTC
T ss_pred ecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCC
Confidence 999998776432 346777899998753 358899999999999999999999997532211 11111
Q ss_pred ------HhhhcccccccccccccccchhHHHHH
Q 041491 427 ------VNDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 427 ------~~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
.+...+..+.+++.+||..||.+|++.
T Consensus 322 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 354 (365)
T 2y7j_A 322 YQFSSPEWDDRSSTVKDLISRLLQVDPEARLTA 354 (365)
T ss_dssp CCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred CCCCCcccccCCHHHHHHHHHHcCCChhHCcCH
Confidence 112345568999999999999999853
No 189
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.2e-39 Score=310.63 Aligned_cols=234 Identities=27% Similarity=0.358 Sum_probs=198.7
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
.+.|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 457999999999999999999875 58999999997553 3345788999999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC--
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE-- 372 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 372 (467)
|+++++|.+++.. +.+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 9999999999854 46899999999999999999999 9999999999999999999999999999998765432
Q ss_pred ---ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh--------hhccccccccccc
Q 041491 373 ---SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN--------DFLPISVMNVVDT 441 (467)
Q Consensus 373 ---~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~ 441 (467)
..++..|.+||...+..++.++||||||+++|||++|+.||....... ...... ..++..+.+++.+
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCCCSSCCHHHHHHHHH
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCCCCCCccccCHHHHHHHHH
Confidence 245677899999999999999999999999999999999997643221 111111 1234458999999
Q ss_pred ccccchhHHHHHHHHHH
Q 041491 442 SLLRREDKYFAAKKQCV 458 (467)
Q Consensus 442 ~l~~~~~~r~~~~~~~~ 458 (467)
||..+|.+|++ +.+++
T Consensus 254 ~l~~dp~~Rps-~~~ll 269 (303)
T 3a7i_A 254 CLNKEPSFRPT-AKELL 269 (303)
T ss_dssp HCCSSGGGSCC-HHHHT
T ss_pred HcCCChhhCcC-HHHHh
Confidence 99999999974 44443
No 190
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.3e-39 Score=316.95 Aligned_cols=233 Identities=23% Similarity=0.318 Sum_probs=190.4
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeec--------
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSN-------- 285 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 285 (467)
.++|++.+.||+|+||.||+|++. +|+.||+|++..... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 368999999999999999999985 589999999865432 234578899999999999999999999876
Q ss_pred CCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccc
Q 041491 286 GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365 (467)
Q Consensus 286 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 365 (467)
.+..++||||+++ +|.+.+......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4568999999975 787877776678999999999999999999999 999999999999999999999999999999
Q ss_pred eecCCC---------CccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH---------
Q 041491 366 KLLNGK---------ESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW--------- 426 (467)
Q Consensus 366 ~~~~~~---------~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~--------- 426 (467)
+..... ...++..|.|||...+ ..++.++|||||||++|||+||+.||.+....+. ....
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LALISQLCGSITP 250 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCh
Confidence 876522 1234667899998765 4579999999999999999999999976432211 0000
Q ss_pred -----------------------------HhhhcccccccccccccccchhHHHHHH
Q 041491 427 -----------------------------VNDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 427 -----------------------------~~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
.....++.+.+++.+||..||.+|++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 307 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 307 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHH
Confidence 0001133477999999999999998543
No 191
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=6.3e-40 Score=316.03 Aligned_cols=239 Identities=19% Similarity=0.245 Sum_probs=198.0
Q ss_pred HHHHHHHhccCccC-CccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCC-CCCceeEEEEee
Q 041491 210 YQELLLATDHFSEK-SLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVR-HRNLVKIISSCS 284 (467)
Q Consensus 210 ~~~~~~~~~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 284 (467)
++......++|.+. +.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.+++.++ ||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 34445567788887 89999999999999986 48999999997543 234577899999999995 699999999999
Q ss_pred cCCeeeEEEecccCCCHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC---CCcEEEe
Q 041491 285 NGNFEALVLEYMANGSLEKCLYSS-NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD---DMVAHLS 360 (467)
Q Consensus 285 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~ 360 (467)
+.+..++||||+++|+|.+++... ...+++.+++.++.|++.||+||| ++||+||||||+||+++. ++.+||+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEe
Confidence 999999999999999999988543 357899999999999999999999 999999999999999988 7899999
Q ss_pred ccccceecCCCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH---------
Q 041491 361 DFGIAKLLNGKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV--------- 427 (467)
Q Consensus 361 Dfg~a~~~~~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~--------- 427 (467)
|||+++...... ..++..|.+||......++.++||||||+++|||++|+.||......+. .....
T Consensus 177 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~ 255 (327)
T 3lm5_A 177 DFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-YLNISQVNVDYSEE 255 (327)
T ss_dssp CGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCTT
T ss_pred eCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HHHHHhcccccCch
Confidence 999998876432 3467789999999999999999999999999999999999976432221 11111
Q ss_pred -hhhcccccccccccccccchhHHHH
Q 041491 428 -NDFLPISVMNVVDTSLLRREDKYFA 452 (467)
Q Consensus 428 -~~~~~~~~~~~i~~~l~~~~~~r~~ 452 (467)
...+++.+.+++.+||..||.+|++
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt 281 (327)
T 3lm5_A 256 TFSSVSQLATDFIQSLLVKNPEKRPT 281 (327)
T ss_dssp TTTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred hhcccCHHHHHHHHHHcCCChhhCcC
Confidence 1234455889999999999999985
No 192
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.1e-40 Score=317.62 Aligned_cols=239 Identities=23% Similarity=0.305 Sum_probs=179.2
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCee
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 289 (467)
.+.+..++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..
T Consensus 9 p~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 88 (303)
T 2vwi_A 9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL 88 (303)
T ss_dssp ----CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCE
T ss_pred ccccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCc
Confidence 34566789999999999999999999875 58999999986543 23456788999999999999999999999999999
Q ss_pred eEEEecccCCCHHHhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecc
Q 041491 290 ALVLEYMANGSLEKCLYS-------SNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDF 362 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 362 (467)
++||||+++++|.+++.. ....+++..+..++.|++.||.||| ++|++||||||+||+++.++.+||+||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEec
Confidence 999999999999998864 3456899999999999999999999 999999999999999999999999999
Q ss_pred ccceecCCC----------CccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH-----
Q 041491 363 GIAKLLNGK----------ESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW----- 426 (467)
Q Consensus 363 g~a~~~~~~----------~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~----- 426 (467)
|++...... ...++..|.+||.... ..++.++||||||+++|||++|+.||.............
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 245 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPP 245 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCC
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCC
Confidence 998765432 1235667889998765 568999999999999999999999997643222111110
Q ss_pred ----------HhhhcccccccccccccccchhHHHHH
Q 041491 427 ----------VNDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 427 ----------~~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
....+++.+.+++.+||..||.+|++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~ 282 (303)
T 2vwi_A 246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTA 282 (303)
T ss_dssp CTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred ccccccccchhhhhhhHHHHHHHHHHccCChhhCcCH
Confidence 011234457889999999999999753
No 193
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.3e-40 Score=313.63 Aligned_cols=242 Identities=23% Similarity=0.306 Sum_probs=192.4
Q ss_pred HhccCccCCccCcccceeEEEEEecC--CC--eEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCe
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD--GM--EVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNF 288 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~--~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 288 (467)
..++|++.+.||+|+||.||+|++.. ++ .||+|+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 35689999999999999999998642 33 68999987542 234577899999999999999999999998765
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.++||||+++++|.+++......+++..+..++.|++.||.||| ++|++||||||+||+++.++.+||+|||++...
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 78999999999999999776667999999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCc--------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhc
Q 041491 369 NGKES--------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFL 431 (467)
Q Consensus 369 ~~~~~--------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~ 431 (467)
..... ..+..|.+||...+..++.++||||||+++|||++ |+.||......+ ....... ..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 250 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-ILHKIDKEGERLPRPEDC 250 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTSCCCCCCCTTC
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-HHHHHHccCCCCCCCcCc
Confidence 54322 23446899999888888999999999999999999 999997643221 1111111 234
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 432 PISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 432 ~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
++.+.+++.+||..+|.+|+ ++.++++.|.+
T Consensus 251 ~~~l~~li~~~l~~~p~~Rp-s~~~l~~~l~~ 281 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPEDRP-TFVALRDFLLE 281 (291)
T ss_dssp CHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCcccCc-CHHHHHHHHHH
Confidence 55689999999999999996 56666665544
No 194
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.8e-40 Score=311.24 Aligned_cols=234 Identities=23% Similarity=0.238 Sum_probs=181.3
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccccc--chHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG--ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
..++|++.+.||+|+||.||+|++. +++.||+|+++..... ..+.+.++...++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 4578999999999999999999985 5899999999754322 223344555557888999999999999999999999
Q ss_pred EecccCCCHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 293 LEYMANGSLEKCLYS---SNGILDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
|||+++ +|.+++.. ....+++..+..++.|++.||+||| ++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999975 88776643 4567999999999999999999999 87 9999999999999999999999999999876
Q ss_pred CCCC----ccccccccccccc----cCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhh--------hcc
Q 041491 369 NGKE----SMRTQTLATIEYG----REGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVND--------FLP 432 (467)
Q Consensus 369 ~~~~----~~~~~~~~~pe~~----~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~--------~~~ 432 (467)
.... ..++..|.+||.. ....++.++||||+|+++|||+||+.||................ .++
T Consensus 161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (290)
T 3fme_A 161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS 240 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSC
T ss_pred cccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCC
Confidence 5432 2466778999985 56678899999999999999999999997533333233333222 344
Q ss_pred cccccccccccccchhHHHHH
Q 041491 433 ISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 433 ~~~~~~i~~~l~~~~~~r~~~ 453 (467)
+.+.+++.+||..||.+|++.
T Consensus 241 ~~~~~li~~~l~~~p~~Rpt~ 261 (290)
T 3fme_A 241 AEFVDFTSQCLKKNSKERPTY 261 (290)
T ss_dssp HHHHHHHHHHTCSSGGGSCCH
T ss_pred HHHHHHHHHHhhcChhhCcCH
Confidence 568899999999999999753
No 195
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.5e-40 Score=311.66 Aligned_cols=230 Identities=20% Similarity=0.289 Sum_probs=192.5
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 468999999999999999999986 59999999997643 23456788999999999 899999999999999999999
Q ss_pred EecccCCCHHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC---------------
Q 041491 293 LEYMANGSLEKCLYSSN---GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD--------------- 354 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~--------------- 354 (467)
|||+++++|.+++.... ..+++..++.++.|++.||+||| ++||+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999986532 46899999999999999999999 9999999999999999844
Q ss_pred ----CcEEEeccccceecCCCC-ccccccccccccccCC-CCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh
Q 041491 355 ----MVAHLSDFGIAKLLNGKE-SMRTQTLATIEYGREG-QVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN 428 (467)
Q Consensus 355 ----~~~kl~Dfg~a~~~~~~~-~~~~~~~~~pe~~~~~-~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~ 428 (467)
..+||+|||.+....... ..++..|.+||...+. .+++++|||||||++|||++|.+|+.... .......
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~~~~~ 242 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----QWHEIRQ 242 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----HHHHHHT
T ss_pred cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----HHHHHHc
Confidence 479999999999876543 3467789999988765 56689999999999999999998775421 1122221
Q ss_pred -------hhcccccccccccccccchhHHHHH
Q 041491 429 -------DFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 429 -------~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
..+++.+.+++.+||..||.+|++.
T Consensus 243 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~ 274 (289)
T 1x8b_A 243 GRLPRIPQVLSQEFTELLKVMIHPDPERRPSA 274 (289)
T ss_dssp TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCCCcccCHHHHHHHHHHhCCCcccCCCH
Confidence 2344569999999999999999853
No 196
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.5e-39 Score=307.89 Aligned_cols=234 Identities=24% Similarity=0.333 Sum_probs=191.5
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeec----CCeee
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSN----GNFEA 290 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~ 290 (467)
+.|++.+.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 45788899999999999999886 48899999987543 2345678899999999999999999998865 45689
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeeec-CCCcEEEecccccee
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNP--VVHCDIKPSNVLLD-DDMVAHLSDFGIAKL 367 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlkp~NIll~-~~~~~kl~Dfg~a~~ 367 (467)
+||||+++++|.+++... ..+++..+..++.|++.||.||| +++ |+||||||+||+++ +++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999998653 46899999999999999999999 888 99999999999997 788999999999976
Q ss_pred cCCCC---ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH--------hhhcccccc
Q 041491 368 LNGKE---SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV--------NDFLPISVM 436 (467)
Q Consensus 368 ~~~~~---~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~ 436 (467)
..... ..++..|.+||... +.++.++||||+|+++|||++|+.||.............. ....++.+.
T Consensus 182 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 260 (290)
T 1t4h_A 182 KRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK 260 (290)
T ss_dssp CCTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHH
T ss_pred ccccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHH
Confidence 55433 23567789999876 4589999999999999999999999976432222222111 112234588
Q ss_pred cccccccccchhHHHHHHHHH
Q 041491 437 NVVDTSLLRREDKYFAAKKQC 457 (467)
Q Consensus 437 ~~i~~~l~~~~~~r~~~~~~~ 457 (467)
+++.+||..||.+|++ +.++
T Consensus 261 ~li~~~l~~dp~~Rps-~~el 280 (290)
T 1t4h_A 261 EIIEGCIRQNKDERYS-IKDL 280 (290)
T ss_dssp HHHHHHSCSSGGGSCC-HHHH
T ss_pred HHHHHHccCChhhCCC-HHHH
Confidence 9999999999999985 3343
No 197
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.1e-39 Score=313.82 Aligned_cols=233 Identities=24% Similarity=0.307 Sum_probs=191.1
Q ss_pred HhccCccCCccCcccceeEEEEEecC-CCeEEEEEeeccc--------ccchHHHHHHHHHHHcCCCCCceeEEEEeecC
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQF--------DGALKSFDAECEVLKSVRHRNLVKIISSCSNG 286 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 286 (467)
..++|++.+.||+|+||.||+|.+.. ++.||+|++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 34689999999999999999999864 8899999986432 12234688999999999999999999998776
Q ss_pred CeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc---EEEeccc
Q 041491 287 NFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV---AHLSDFG 363 (467)
Q Consensus 287 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg 363 (467)
+ .++||||+++++|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 7999999999999998854 457899999999999999999999 999999999999999987654 9999999
Q ss_pred cceecCCCC----ccccccccccccc---cCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH----------
Q 041491 364 IAKLLNGKE----SMRTQTLATIEYG---REGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW---------- 426 (467)
Q Consensus 364 ~a~~~~~~~----~~~~~~~~~pe~~---~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~---------- 426 (467)
+++...... ..++..|.+||.. ....++.++|||||||++|||++|+.||....... .+...
T Consensus 163 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~ 241 (322)
T 2ycf_A 163 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYNFIP 241 (322)
T ss_dssp TCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHTCCCCCH
T ss_pred cceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhCccccCc
Confidence 999876543 2356778999986 35678999999999999999999999997643222 22222
Q ss_pred -HhhhcccccccccccccccchhHHHHHH
Q 041491 427 -VNDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 427 -~~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
....+++.+.+++.+||..||.+|++..
T Consensus 242 ~~~~~~~~~~~~li~~~l~~dP~~Rps~~ 270 (322)
T 2ycf_A 242 EVWAEVSEKALDLVKKLLVVDPKARFTTE 270 (322)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred hhhhhcCHHHHHHHHHHcccCHhhCCCHH
Confidence 2234566789999999999999998543
No 198
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=342.09 Aligned_cols=238 Identities=22% Similarity=0.362 Sum_probs=195.2
Q ss_pred ccCccCC-ccCcccceeEEEEEec---CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 218 DHFSEKS-LIGIGSFGTVYKGRFL---DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 218 ~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
+++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++|
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 3444444 7999999999999875 35679999997653 2356789999999999999999999999976 558999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+|||+++++.+||+|||+++......
T Consensus 414 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp EECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred EEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 9999999999999777678999999999999999999999 9999999999999999999999999999998765322
Q ss_pred c--------cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhccccc
Q 041491 373 S--------MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPISV 435 (467)
Q Consensus 373 ~--------~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~~ 435 (467)
. ..+..|.|||++..+.++.++|||||||++|||+| |+.||.+....+ ....+. ..+++++
T Consensus 491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~~~~~p~~~~~~l 568 (613)
T 2ozo_A 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGKRMECPPECPPEL 568 (613)
T ss_dssp -----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHHHHHTTCCCCCCTTCCHHH
T ss_pred ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCCCCCCCcCCHHH
Confidence 1 12356899999988999999999999999999998 999998643322 222322 2345569
Q ss_pred ccccccccccchhHHHHHHHHHHHHHH
Q 041491 436 MNVVDTSLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 436 ~~~i~~~l~~~~~~r~~~~~~~~~~l~ 462 (467)
.+++.+|+..+|++|+ ++.++++.|-
T Consensus 569 ~~li~~cl~~dP~~RP-s~~~l~~~L~ 594 (613)
T 2ozo_A 569 YALMSDCWIYKWEDRP-DFLTVEQRMR 594 (613)
T ss_dssp HHHHHHTTCSSTTTSC-CHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCc-CHHHHHHHHH
Confidence 9999999999999996 4555555443
No 199
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.8e-40 Score=324.27 Aligned_cols=196 Identities=26% Similarity=0.363 Sum_probs=174.1
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 468999999999999999999986 58999999997653 2345678999999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeecCCCcEEEeccccceecCC---
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNG--- 370 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~--- 370 (467)
|+++++|.+++... +.+++..+..++.|++.||.||| ++ ||+||||||+||+++.++.+||+|||++.....
T Consensus 112 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 187 (360)
T 3eqc_A 112 HMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187 (360)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC-
T ss_pred CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccc
Confidence 99999999998654 46899999999999999999999 75 999999999999999999999999999875432
Q ss_pred CCccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 371 KESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 371 ~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
....++..|.+||...+..++.++|||||||++|||+||+.||...
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2335677899999999999999999999999999999999999753
No 200
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.8e-40 Score=312.33 Aligned_cols=238 Identities=24% Similarity=0.314 Sum_probs=194.6
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEee--cCCeeeE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCS--NGNFEAL 291 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~l 291 (467)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999986 58999999997543 234567889999999999999999999874 4678899
Q ss_pred EEecccCCCHHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----ceecCCCCCCeeecCCCcEEEeccc
Q 041491 292 VLEYMANGSLEKCLYSS---NGILDIFQRLSIMIDVALALEYLHFGYSNP-----VVHCDIKPSNVLLDDDMVAHLSDFG 363 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlkp~NIll~~~~~~kl~Dfg 363 (467)
||||+++++|.+++... ...+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998643 235899999999999999999999 888 9999999999999999999999999
Q ss_pred cceecCCCCc-----cccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh-------hhc
Q 041491 364 IAKLLNGKES-----MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN-------DFL 431 (467)
Q Consensus 364 ~a~~~~~~~~-----~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~-------~~~ 431 (467)
+++....... .++..|.+||...+..++.++||||||+++|||+||+.||......+. ...... ..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~i~~~~~~~~~~~~ 240 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-AGKIREGKFRRIPYRY 240 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCCCTTS
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH-HHHHhhcccccCCccc
Confidence 9987654432 356678999999888899999999999999999999999976432211 111111 123
Q ss_pred ccccccccccccccchhHHHHHHHHHHH
Q 041491 432 PISVMNVVDTSLLRREDKYFAAKKQCVS 459 (467)
Q Consensus 432 ~~~~~~~i~~~l~~~~~~r~~~~~~~~~ 459 (467)
++++.+++.+||..+|.+|+ ++.|+++
T Consensus 241 ~~~l~~li~~~l~~~p~~Rp-s~~~ll~ 267 (279)
T 2w5a_A 241 SDELNEIITRMLNLKDYHRP-SVEEILE 267 (279)
T ss_dssp CHHHHHHHHHHTCSSGGGSC-CHHHHHT
T ss_pred CHHHHHHHHHHcCCCcccCC-CHHHHHh
Confidence 45689999999999999997 4555554
No 201
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.7e-40 Score=307.60 Aligned_cols=235 Identities=26% Similarity=0.382 Sum_probs=192.6
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 468999999999999999999986 58999999997542 23456788999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||+++++|.+++... +.+++..+..++.|++.||.||| ++|++||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999998654 46899999999999999999999 9999999999999999999999999999998765432
Q ss_pred ----ccccccccccccccCCCC-CCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh-------hhcccccccccc
Q 041491 373 ----SMRTQTLATIEYGREGQV-SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN-------DFLPISVMNVVD 440 (467)
Q Consensus 373 ----~~~~~~~~~pe~~~~~~~-~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~i~ 440 (467)
..++..|.+||...+..+ +.++||||||+++|||++|+.||....... ..+... ..++..+.+++.
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~ 243 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--LFKKIRGGVFYIPEYLNRSVATLLM 243 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHHhhcCcccCchhcCHHHHHHHH
Confidence 235667899999887765 689999999999999999999997643221 111111 223456899999
Q ss_pred cccccchhHHHHHHHHHH
Q 041491 441 TSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 441 ~~l~~~~~~r~~~~~~~~ 458 (467)
+||..||.+|++. .+++
T Consensus 244 ~~l~~~p~~Rps~-~~~l 260 (276)
T 2h6d_A 244 HMLQVDPLKRATI-KDIR 260 (276)
T ss_dssp HHTCSSGGGSCCH-HHHH
T ss_pred HHccCChhhCCCH-HHHH
Confidence 9999999999754 3443
No 202
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.2e-39 Score=326.45 Aligned_cols=236 Identities=20% Similarity=0.242 Sum_probs=196.4
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCC-CCceeEEEEeecCCeeeEEEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH-RNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 294 (467)
.++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 468999999999999999999975 589999998875432 3568899999999986 666677777788889999999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee---cCCCcEEEeccccceecCCC
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---DDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~a~~~~~~ 371 (467)
|+ +++|.+++......+++.+++.++.||+.||+||| ++||+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 99999999876778999999999999999999999 9999999999999999 68889999999999876543
Q ss_pred ------------CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccc--cHH-----------HH
Q 041491 372 ------------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM--NLK-----------NW 426 (467)
Q Consensus 372 ------------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~--~~~-----------~~ 426 (467)
...++..|.+||...+..++.++|||||||++|||++|+.||.+...... .+. ..
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 23456778999999999999999999999999999999999986432211 111 11
Q ss_pred HhhhcccccccccccccccchhHHHHHHHHHHH
Q 041491 427 VNDFLPISVMNVVDTSLLRREDKYFAAKKQCVS 459 (467)
Q Consensus 427 ~~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~ 459 (467)
....+++++.+++..|+..+|++|+ ++.++++
T Consensus 240 l~~~~p~~l~~li~~cl~~dP~~RP-s~~el~~ 271 (483)
T 3sv0_A 240 LCRGYPTEFASYFHYCRSLRFDDKP-DYSYLKR 271 (483)
T ss_dssp HHTTSCHHHHHHHHHHHTCCTTCCC-CHHHHHH
T ss_pred HhcCCcHHHHHHHHHHhcCChhhCc-CHHHHHH
Confidence 2245677899999999999999995 3333333
No 203
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=318.11 Aligned_cols=240 Identities=25% Similarity=0.341 Sum_probs=193.1
Q ss_pred cHHHHHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcC-CCCCceeEEEEeec-
Q 041491 209 SYQELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSN- 285 (467)
Q Consensus 209 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~- 285 (467)
++.++....++|++.+.||+|+||.||+|++. +++.||+|++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 33444456789999999999999999999985 58999999987543 3457789999999998 79999999999976
Q ss_pred -----CCeeeEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEE
Q 041491 286 -----GNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHL 359 (467)
Q Consensus 286 -----~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl 359 (467)
.+..++||||+++++|.+++.... ..+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEE
Confidence 568899999999999999987643 46899999999999999999999 999999999999999999999999
Q ss_pred eccccceecCCC-----Ccccccccccccccc-----CCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh-
Q 041491 360 SDFGIAKLLNGK-----ESMRTQTLATIEYGR-----EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN- 428 (467)
Q Consensus 360 ~Dfg~a~~~~~~-----~~~~~~~~~~pe~~~-----~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~- 428 (467)
+|||++...... ...++..|.+||... +..++.++|||||||++|||+||+.||.+...... ......
T Consensus 171 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~ 249 (326)
T 2x7f_A 171 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPRN 249 (326)
T ss_dssp CCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHS
T ss_pred eeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHHhhcC
Confidence 999999876532 224567789999876 56789999999999999999999999976432211 111111
Q ss_pred -------hhcccccccccccccccchhHHHHH
Q 041491 429 -------DFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 429 -------~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
..+++.+.+++.+||..||.+|++.
T Consensus 250 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 281 (326)
T 2x7f_A 250 PAPRLKSKKWSKKFQSFIESCLVKNHSQRPAT 281 (326)
T ss_dssp CCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred ccccCCccccCHHHHHHHHHHhccChhhCCCH
Confidence 2234568999999999999999853
No 204
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1e-39 Score=314.61 Aligned_cols=243 Identities=23% Similarity=0.322 Sum_probs=197.0
Q ss_pred HHhccCccCCccCcccceeEEEEEec------CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCC
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFL------DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN 287 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 287 (467)
+..++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+.++++++||||+++++++...+
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 34678999999999999999999842 47789999986442 334567889999999999999999999999999
Q ss_pred eeeEEEecccCCCHHHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC---CCcEE
Q 041491 288 FEALVLEYMANGSLEKCLYSSN------GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD---DMVAH 358 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~k 358 (467)
..++||||+++++|.+++.... ..+++..++.++.|++.||.||| ++||+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEE
Confidence 9999999999999999997654 35889999999999999999999 999999999999999984 44699
Q ss_pred EeccccceecCCC-------CccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHhh-
Q 041491 359 LSDFGIAKLLNGK-------ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVND- 429 (467)
Q Consensus 359 l~Dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~- 429 (467)
|+|||++...... ...++..|.+||...+..++.++||||||+++|||+| |+.||...... .....+..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~ 261 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSG 261 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTT
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHHHhcC
Confidence 9999999754322 1234567899999988899999999999999999998 99999764322 22222221
Q ss_pred -------hcccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 430 -------FLPISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 430 -------~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
.+++.+.+++.+||..||.+|+ ++.++++.+-.
T Consensus 262 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rp-s~~~ll~~l~~ 301 (327)
T 2yfx_A 262 GRMDPPKNCPGPVYRIMTQCWQHQPEDRP-NFAIILERIEY 301 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCChhhCc-CHHHHHHHHHH
Confidence 3445688999999999999996 56666666543
No 205
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=318.98 Aligned_cols=240 Identities=25% Similarity=0.365 Sum_probs=185.2
Q ss_pred HHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHH--HHcCCCCCceeEEEEee-----cCC
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEV--LKSVRHRNLVKIISSCS-----NGN 287 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~-----~~~ 287 (467)
+..++|++.+.||+|+||.||+|++ +++.||+|++.... ...+..|.++ +..++||||+++++.+. ...
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 3457899999999999999999987 68999999987542 2344445555 44589999999998543 233
Q ss_pred eeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CceecCCCCCCeeecCCCcEE
Q 041491 288 FEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN---------PVVHCDIKPSNVLLDDDMVAH 358 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~---------~ivH~dlkp~NIll~~~~~~k 358 (467)
..++||||+++|+|.+++.... .++..+..++.|++.||+||| +. ||+||||||+||+++.++.+|
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred eEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEE
Confidence 6789999999999999996543 588999999999999999999 88 999999999999999999999
Q ss_pred EeccccceecCCC-------------CccccccccccccccC-------CCCCCcccchhhHHHHHHHhcCCCCCCcccc
Q 041491 359 LSDFGIAKLLNGK-------------ESMRTQTLATIEYGRE-------GQVSPKSDVYGYGITLIETFTKKKPTCEIFC 418 (467)
Q Consensus 359 l~Dfg~a~~~~~~-------------~~~~~~~~~~pe~~~~-------~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~ 418 (467)
|+|||+++.+... ...++..|.|||...+ ..++.++|||||||++|||+||..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 9999999876532 1236678899998876 4566789999999999999999877643211
Q ss_pred cc-------------ccHHHH---Hh-----hhcc----------cccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 419 EE-------------MNLKNW---VN-----DFLP----------ISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 419 ~~-------------~~~~~~---~~-----~~~~----------~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
.. .....+ +. ..++ +.+.+++.+||..||.+|+ ++.|+++.|.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~e~l~~L~~l 316 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARL-TAQXAEERMAEL 316 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSC-CHHHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCc-chHHHHHHHHHH
Confidence 10 011111 10 1111 2488999999999999997 566666665543
No 206
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.1e-39 Score=310.31 Aligned_cols=232 Identities=25% Similarity=0.314 Sum_probs=191.1
Q ss_pred ccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEe
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 294 (467)
++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 68999999999999999999986 58999999986543 2234678899999999999999999999999999999999
Q ss_pred cccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC--
Q 041491 295 YMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK-- 371 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 371 (467)
|++ ++|.+++.... ..+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 59999886553 46899999999999999999999 999999999999999999999999999999876532
Q ss_pred ---CccccccccccccccCCC-CCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH--------------------
Q 041491 372 ---ESMRTQTLATIEYGREGQ-VSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV-------------------- 427 (467)
Q Consensus 372 ---~~~~~~~~~~pe~~~~~~-~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~-------------------- 427 (467)
...++..|.+||...+.. ++.++||||||+++|||+||+.||......+. +....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPDEVVWPGVTSMPDY 237 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCCCchhhhhHhhcCccc
Confidence 224566789999887655 78999999999999999999999976432211 11111
Q ss_pred ---------------hhhcccccccccccccccchhHHHHHH
Q 041491 428 ---------------NDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 428 ---------------~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
...+++++.+++.+||..||++|++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 279 (299)
T 2r3i_A 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279 (299)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred chhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHH
Confidence 122445678999999999999998543
No 207
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=7.6e-41 Score=328.17 Aligned_cols=234 Identities=13% Similarity=0.083 Sum_probs=177.2
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc---cchHHHHHHHHHHHcC--CCCCceeEE-------EEe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD---GALKSFDAECEVLKSV--RHRNLVKII-------SSC 283 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~ 283 (467)
..+|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 456999999999999999999986 589999999987532 2345677785444444 799988865 444
Q ss_pred ecC-----------------CeeeEEEecccCCCHHHhhhcCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCce
Q 041491 284 SNG-----------------NFEALVLEYMANGSLEKCLYSSNGILDIFQR------LSIMIDVALALEYLHFGYSNPVV 340 (467)
Q Consensus 284 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~LH~~~~~~iv 340 (467)
... ...++||||++ |+|.+++......+++..+ ..++.|++.||+||| ++||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 332 33799999998 8999999765444555556 778899999999999 99999
Q ss_pred ecCCCCCCeeecCCCcEEEeccccceecCCCC--ccccccccccccccC--CCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 341 HCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE--SMRTQTLATIEYGRE--GQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 341 H~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~~pe~~~~--~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
||||||+|||++.++.+||+|||+|+...... ..++..|.|||...+ ..++.++|||||||++|||+||+.||...
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 296 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV 296 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999876543 345678899999987 77899999999999999999999999865
Q ss_pred cccccc-H----------HHH---HhhhcccccccccccccccchhHHHHHH
Q 041491 417 FCEEMN-L----------KNW---VNDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 417 ~~~~~~-~----------~~~---~~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
...... . ..+ ....+++.+.+++.+||..||++|++..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 348 (371)
T 3q60_A 297 TPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPL 348 (371)
T ss_dssp CTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHH
T ss_pred CcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 222110 0 000 1124566799999999999999998643
No 208
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.9e-40 Score=318.99 Aligned_cols=231 Identities=21% Similarity=0.296 Sum_probs=195.3
Q ss_pred hccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccc-----------------hHHHHHHHHHHHcCCCCCceeE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGA-----------------LKSFDAECEVLKSVRHRNLVKI 279 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~~ 279 (467)
.++|++.+.||+|+||.||+|.+ +++.||+|++....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 89999999997542211 1789999999999999999999
Q ss_pred EEEeecCCeeeEEEecccCCCHHHh------hhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCceecCCCCCCeee
Q 041491 280 ISSCSNGNFEALVLEYMANGSLEKC------LYSS-NGILDIFQRLSIMIDVALALEYLHFGYS-NPVVHCDIKPSNVLL 351 (467)
Q Consensus 280 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlkp~NIll 351 (467)
++++.+.+..++||||+++++|.++ +... ...+++..++.++.|++.||.||| + +||+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5432 457999999999999999999999 8 999999999999999
Q ss_pred cCCCcEEEeccccceecCCC---CccccccccccccccCC-CCCC-cccchhhHHHHHHHhcCCCCCCccccccccHHHH
Q 041491 352 DDDMVAHLSDFGIAKLLNGK---ESMRTQTLATIEYGREG-QVSP-KSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW 426 (467)
Q Consensus 352 ~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~~pe~~~~~-~~~~-~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~ 426 (467)
+.++.+||+|||.+...... ...++..|.+||...+. .++. ++||||||+++|||++|+.||....... .....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~ 264 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV-ELFNN 264 (348)
T ss_dssp CTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH-HHHHH
T ss_pred cCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHH
Confidence 99999999999999876443 23466778999998877 6666 9999999999999999999997643311 11111
Q ss_pred Hh--------------------------hhcccccccccccccccchhHHHH
Q 041491 427 VN--------------------------DFLPISVMNVVDTSLLRREDKYFA 452 (467)
Q Consensus 427 ~~--------------------------~~~~~~~~~~i~~~l~~~~~~r~~ 452 (467)
+. ..+++.+.+++.+||..||.+|++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps 316 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT 316 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCC
Confidence 11 334556889999999999999974
No 209
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=9.1e-40 Score=316.68 Aligned_cols=234 Identities=24% Similarity=0.270 Sum_probs=191.9
Q ss_pred HHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc-cchHHHHHHHHH-HHcCCCCCceeEEEEeecCCeeeE
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-GALKSFDAECEV-LKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
+..++|++.+.||+|+||.||+|++. +|+.||||+++.... .....+..|..+ ++.++||||+++++++...+..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 44578999999999999999999985 589999999975532 233455566665 677899999999999999999999
Q ss_pred EEecccCCCHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeecCCCcEEEecccccee
Q 041491 292 VLEYMANGSLEKCLYS---SNGILDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
||||+++ +|.+++.. ....+++..++.++.|++.||+||| ++ ||+||||||+||+++.++.+||+|||+++.
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999976 99888754 4567999999999999999999999 86 999999999999999999999999999987
Q ss_pred cCCCC----cccccccccccccc----CCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh--------hhc
Q 041491 368 LNGKE----SMRTQTLATIEYGR----EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN--------DFL 431 (467)
Q Consensus 368 ~~~~~----~~~~~~~~~pe~~~----~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~--------~~~ 431 (467)
..... ..++..|.+||.+. ...++.++|||||||++|||+||+.||.........+..... ..+
T Consensus 204 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (340)
T 3an0_A 204 LVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF 283 (340)
T ss_dssp HSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGS
T ss_pred cccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCcccC
Confidence 65432 24677899999864 347889999999999999999999999753222222222222 234
Q ss_pred ccccccccccccccchhHHHH
Q 041491 432 PISVMNVVDTSLLRREDKYFA 452 (467)
Q Consensus 432 ~~~~~~~i~~~l~~~~~~r~~ 452 (467)
++++.+++.+||..||.+|++
T Consensus 284 ~~~~~~li~~~l~~dp~~Rps 304 (340)
T 3an0_A 284 SAEFVDFTSQCLKKNSKERPT 304 (340)
T ss_dssp CHHHHHHHHHHTCSSGGGSCC
T ss_pred CHHHHHHHHHHccCCcccCcC
Confidence 556899999999999999985
No 210
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=311.52 Aligned_cols=233 Identities=22% Similarity=0.297 Sum_probs=185.8
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEee-----------
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS----------- 284 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----------- 284 (467)
.++|++.+.||+|+||.||+|.+.. ++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 3689999999999999999999875 8999999998665556678899999999999999999999874
Q ss_pred ---cCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeec-CCCcEEEe
Q 041491 285 ---NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLD-DDMVAHLS 360 (467)
Q Consensus 285 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~ 360 (467)
..+..++||||++ |+|.+++.. +.+++..++.++.|++.||+||| ++||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999997 599998853 46899999999999999999999 99999999999999997 56799999
Q ss_pred ccccceecCCC--------CccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH-----
Q 041491 361 DFGIAKLLNGK--------ESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW----- 426 (467)
Q Consensus 361 Dfg~a~~~~~~--------~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~----- 426 (467)
|||+++..... ....+..|.+||.... ..++.++||||||+++|||+||+.||......+. ....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcC
Confidence 99999876432 1233566889997654 6789999999999999999999999976432110 0000
Q ss_pred -------------------------------HhhhcccccccccccccccchhHHHHHHHHH
Q 041491 427 -------------------------------VNDFLPISVMNVVDTSLLRREDKYFAAKKQC 457 (467)
Q Consensus 427 -------------------------------~~~~~~~~~~~~i~~~l~~~~~~r~~~~~~~ 457 (467)
....+++.+.+++.+||..||.+|++ +.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~el 303 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT-AEEA 303 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC-HHHH
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC-HHHH
Confidence 11235667999999999999999985 3344
No 211
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.3e-39 Score=307.84 Aligned_cols=233 Identities=23% Similarity=0.294 Sum_probs=195.2
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc---------ccchHHHHHHHHHHHcCC-CCCceeEEEEee
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF---------DGALKSFDAECEVLKSVR-HRNLVKIISSCS 284 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 284 (467)
..++|++.+.||+|+||.||+|.+. +++.||+|+++... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3578999999999999999999986 48999999997543 122456789999999995 999999999999
Q ss_pred cCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccc
Q 041491 285 NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGI 364 (467)
Q Consensus 285 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 364 (467)
..+..++||||+++++|.+++... ..+++..+..++.|++.||.||| ++|++||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999998653 46899999999999999999999 99999999999999999999999999999
Q ss_pred ceecCCCC----cccccccccccccc------CCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------
Q 041491 365 AKLLNGKE----SMRTQTLATIEYGR------EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------ 428 (467)
Q Consensus 365 a~~~~~~~----~~~~~~~~~pe~~~------~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------ 428 (467)
+....... ..++..|.+||... ...++.++||||||+++|||++|+.||....... .......
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~ 249 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-MLRMIMSGNYQFG 249 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCC
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH-HHHHHhcCCcccC
Confidence 98775432 23566789999874 4568899999999999999999999997542221 1111111
Q ss_pred ----hhcccccccccccccccchhHHHHH
Q 041491 429 ----DFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 429 ----~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
..+++.+.+++.+||..||.+|++.
T Consensus 250 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 278 (298)
T 1phk_A 250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTA 278 (298)
T ss_dssp TTTGGGSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred cccccccCHHHHHHHHHHccCCcccCCCH
Confidence 2345568999999999999999853
No 212
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.3e-39 Score=317.56 Aligned_cols=193 Identities=21% Similarity=0.244 Sum_probs=162.7
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCC------
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGN------ 287 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 287 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 368999999999999999999886 48899999997542 234467889999999999999999999997665
Q ss_pred eeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 288 FEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
..++||||+++ +|.+.+. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHh---hccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 7888774 34889999999999999999999 99999999999999999999999999999987
Q ss_pred cCCC----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 368 LNGK----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 368 ~~~~----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
.... ...++..|.|||...+..++.++||||+||++|||++|+.||.+.
T Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 6543 234577799999999999999999999999999999999999754
No 213
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2e-39 Score=306.21 Aligned_cols=218 Identities=15% Similarity=0.092 Sum_probs=185.4
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccc---cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFD---GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
.++|++.+.||+|+||.||+|++.. ++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 3689999999999999999999865 89999999976532 2346789999999999999999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||++|++|.+++... ....++..++.|++.||+||| ++||+||||||+||+++.++.+||+++|..
T Consensus 110 ~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~------- 176 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATM------- 176 (286)
T ss_dssp EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCC-------
T ss_pred EEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecccc-------
Confidence 9999999999998432 356678899999999999999 999999999999999999999999866542
Q ss_pred ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc------------ccHHHHHhhhcccccccccc
Q 041491 373 SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE------------MNLKNWVNDFLPISVMNVVD 440 (467)
Q Consensus 373 ~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~------------~~~~~~~~~~~~~~~~~~i~ 440 (467)
..++.++|||||||++|||+||+.||.+....+ .....-....+++.+.+++.
T Consensus 177 ---------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 241 (286)
T 3uqc_A 177 ---------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAA 241 (286)
T ss_dssp ---------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHH
T ss_pred ---------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHH
Confidence 136889999999999999999999997643221 11122344567778999999
Q ss_pred cccccchhHHHHHHHHHHHHHHhc
Q 041491 441 TSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 441 ~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
+||..||.+| ++.|+++.|.++
T Consensus 242 ~~l~~dP~~R--s~~el~~~L~~~ 263 (286)
T 3uqc_A 242 RSVQGDGGIR--SASTLLNLMQQA 263 (286)
T ss_dssp HHHCTTSSCC--CHHHHHHHHHHH
T ss_pred HHcccCCccC--CHHHHHHHHHHH
Confidence 9999999999 888888888664
No 214
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=9.3e-40 Score=319.35 Aligned_cols=232 Identities=21% Similarity=0.278 Sum_probs=175.4
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecC------C
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNG------N 287 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~ 287 (467)
.++|++.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468999999999999999999875 58999999986542 23456788999999999999999999998654 5
Q ss_pred eeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 288 FEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 288 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
..++|+|++ +++|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 7899998854 46899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCC--CccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccc----------------------c
Q 041491 368 LNGK--ESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM----------------------N 422 (467)
Q Consensus 368 ~~~~--~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~----------------------~ 422 (467)
.... ...++..|.+||.+.+ ..++.++||||+||++|||++|+.||.+....+. .
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred ccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 6543 2346778899998876 6789999999999999999999999976422110 0
Q ss_pred HHHHH--------------hhhcccccccccccccccchhHHHHHH
Q 041491 423 LKNWV--------------NDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 423 ~~~~~--------------~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
...+. ....++.+.+++.+||..||.+|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~ 307 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHH
Confidence 01111 112344588999999999999998643
No 215
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.1e-39 Score=320.17 Aligned_cols=231 Identities=23% Similarity=0.288 Sum_probs=184.5
Q ss_pred hccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCC------eee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN------FEA 290 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~ 290 (467)
..+|++.+.||+|+||.||+|++..+..||+|++..... ...+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 357999999999999999999998777799998864322 2237999999999999999999985433 478
Q ss_pred EEEecccCCCHHHhh--hcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeec-CCCcEEEecccccee
Q 041491 291 LVLEYMANGSLEKCL--YSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLD-DDMVAHLSDFGIAKL 367 (467)
Q Consensus 291 lv~e~~~~g~L~~~l--~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~Dfg~a~~ 367 (467)
+||||++++.+.... ......+++..+..++.|++.||+||| ++||+||||||+||+++ .++.+||+|||+|+.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999999875443332 123457899999999999999999999 99999999999999999 789999999999987
Q ss_pred cCCC----CccccccccccccccCC-CCCCcccchhhHHHHHHHhcCCCCCCcccccccc--------------------
Q 041491 368 LNGK----ESMRTQTLATIEYGREG-QVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMN-------------------- 422 (467)
Q Consensus 368 ~~~~----~~~~~~~~~~pe~~~~~-~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~-------------------- 422 (467)
.... ...++..|.|||.+.+. .++.++||||+||++|||++|+.||.+....+..
T Consensus 192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 6433 23457779999988654 5899999999999999999999999764322110
Q ss_pred --------------HHHHHhhhcccccccccccccccchhHHHHHH
Q 041491 423 --------------LKNWVNDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 423 --------------~~~~~~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
+........++++.+++.+||..||.+|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 317 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAI 317 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHH
Confidence 01111122455789999999999999998644
No 216
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.9e-39 Score=321.12 Aligned_cols=195 Identities=24% Similarity=0.310 Sum_probs=167.8
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCC--------CCCceeEEEEee---
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR--------HRNLVKIISSCS--- 284 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~--- 284 (467)
.++|++.+.||+|+||.||+|++. +++.||+|+++.. ....+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 478999999999999999999876 4889999999744 334567889999999885 788999999987
Q ss_pred -cCCeeeEEEecccCCCHHHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeecCCC------
Q 041491 285 -NGNFEALVLEYMANGSLEKCLYS-SNGILDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNVLLDDDM------ 355 (467)
Q Consensus 285 -~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~------ 355 (467)
.....++||||+.+ ++.+.+.. ....+++..++.++.|++.||+||| ++ ||+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEeccCc-cHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 56688999999954 55555544 3357999999999999999999999 88 999999999999998775
Q ss_pred -------------------------------------------cEEEeccccceecCCC--CccccccccccccccCCCC
Q 041491 356 -------------------------------------------VAHLSDFGIAKLLNGK--ESMRTQTLATIEYGREGQV 390 (467)
Q Consensus 356 -------------------------------------------~~kl~Dfg~a~~~~~~--~~~~~~~~~~pe~~~~~~~ 390 (467)
.+||+|||++...... ...++..|.+||.+.+..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCC
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCC
Confidence 7999999999876543 2346788999999999999
Q ss_pred CCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 391 SPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 391 ~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
+.++|||||||++|||+||+.||...
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 99999999999999999999999754
No 217
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.4e-41 Score=320.38 Aligned_cols=241 Identities=21% Similarity=0.357 Sum_probs=180.3
Q ss_pred hccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHc--CCCCCceeEEEEeecCC----eee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKS--VRHRNLVKIISSCSNGN----FEA 290 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~ 290 (467)
.++|++.+.||+|+||.||+|++ +++.||+|++... ....+.+|.+++.. ++||||+++++++...+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 46899999999999999999987 4899999998643 34567788888887 78999999999998776 789
Q ss_pred EEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCceecCCCCCCeeecCCCcEEEeccccc
Q 041491 291 LVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG-----YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIA 365 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a 365 (467)
+||||+++|+|.+++... .+++..+..++.|++.||+|||.. +++||+||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 999999999999999553 578888999999999999999932 2679999999999999999999999999999
Q ss_pred eecCCCCc---------cccccccccccccCC------CCCCcccchhhHHHHHHHhcC----------CCCCCcccccc
Q 041491 366 KLLNGKES---------MRTQTLATIEYGREG------QVSPKSDVYGYGITLIETFTK----------KKPTCEIFCEE 420 (467)
Q Consensus 366 ~~~~~~~~---------~~~~~~~~pe~~~~~------~~~~~~Dv~slGvil~el~tg----------~~Pf~~~~~~~ 420 (467)
+....... .++..|.|||...+. .++.++|||||||++|||+|| +.||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 76543322 467788999988765 344689999999999999999 77776542221
Q ss_pred c---cHHHHH-h----hhcc---------cccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 421 M---NLKNWV-N----DFLP---------ISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 421 ~---~~~~~~-~----~~~~---------~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
. .....+ . ...+ +.+.+++.+|+..||.+|+ ++.++++.|.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~~i~~~L~~l 295 (303)
T 3gxj_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL-TALRIKKTLSQL 295 (303)
T ss_dssp CCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSC-CHHHHHHHHHC-
T ss_pred ccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCC-CHHHHHHHHHHh
Confidence 1 111221 1 1111 2477899999999999996 566777776654
No 218
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1e-38 Score=309.53 Aligned_cols=249 Identities=20% Similarity=0.321 Sum_probs=199.7
Q ss_pred cHHHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHc--CCCCCceeEEEEeecC
Q 041491 209 SYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKS--VRHRNLVKIISSCSNG 286 (467)
Q Consensus 209 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~ 286 (467)
+...-....++|++.+.||+|+||.||+|++ +++.||+|++... ....+.+|++++.. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3333455678999999999999999999998 5899999998643 34567789998887 7899999999999877
Q ss_pred C----eeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCceecCCCCCCeeecCCCcE
Q 041491 287 N----FEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG-----YSNPVVHCDIKPSNVLLDDDMVA 357 (467)
Q Consensus 287 ~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~ 357 (467)
+ ..++||||+++|+|.+++... .+++.+++.++.|++.||+|||.. .+++|+||||||+||+++.++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 6 789999999999999999653 589999999999999999999932 14789999999999999999999
Q ss_pred EEeccccceecCCCC---------ccccccccccccccCCC------CCCcccchhhHHHHHHHhcC----------CCC
Q 041491 358 HLSDFGIAKLLNGKE---------SMRTQTLATIEYGREGQ------VSPKSDVYGYGITLIETFTK----------KKP 412 (467)
Q Consensus 358 kl~Dfg~a~~~~~~~---------~~~~~~~~~pe~~~~~~------~~~~~Dv~slGvil~el~tg----------~~P 412 (467)
||+|||++....... ..++..|.+||...+.. ++.++|||||||++|||+|| +.|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 999999998765432 24567789999887652 34689999999999999999 789
Q ss_pred CCccccccccHHHHHhhh--------cc---------cccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 413 TCEIFCEEMNLKNWVNDF--------LP---------ISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 413 f~~~~~~~~~~~~~~~~~--------~~---------~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
|......+.....+.... ++ +.+.+++.+||..||.+|+ ++.++++.|.++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~i~~~L~~i 334 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL-TALRIKKTLSQL 334 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSC-CHHHHHHHHHHH
T ss_pred ccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCC-CHHHHHHHHHHH
Confidence 876544333333332211 11 2467899999999999997 566777666554
No 219
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.5e-39 Score=321.89 Aligned_cols=195 Identities=19% Similarity=0.263 Sum_probs=171.1
Q ss_pred hccCccCCccCcccceeEEEEEecC-CCeEEEEEeecccccchHHHHHHHHHHHcC------CCCCceeEEEEeecCCee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSV------RHRNLVKIISSCSNGNFE 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 289 (467)
..+|++.+.||+|+||.||+|.+.. ++.||+|+++.. ......+.+|+++++.+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 4579999999999999999998864 899999999754 23346677888888876 577999999999999999
Q ss_pred eEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc--EEEeccccce
Q 041491 290 ALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV--AHLSDFGIAK 366 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~a~ 366 (467)
++||||+. ++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+|||++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 58988886654 35899999999999999999999 999999999999999999887 9999999998
Q ss_pred ecCCCC--ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 367 LLNGKE--SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 367 ~~~~~~--~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
...... ..++..|.|||++.+..++.++|||||||++|||+||+.||...
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 765432 34677899999999999999999999999999999999999764
No 220
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.3e-39 Score=315.68 Aligned_cols=230 Identities=22% Similarity=0.245 Sum_probs=189.8
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecC-----Cee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNG-----NFE 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 289 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999886 58899999997543 23346788999999999999999999998654 368
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
++||||++ |+|.+++.. +.+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~-~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT--QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999997 499998865 35899999999999999999999 9999999999999999999999999999998765
Q ss_pred CC--------CccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH--------------
Q 041491 370 GK--------ESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW-------------- 426 (467)
Q Consensus 370 ~~--------~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~-------------- 426 (467)
.. ...++..|.+||.+.+ ..++.++||||+||++|||++|+.||.+....+. +...
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~ 258 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLNC 258 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH-HHHHHHHHCSCCHHHHHT
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHH
Confidence 32 2245777899997654 4589999999999999999999999976432211 1000
Q ss_pred -----------------------HhhhcccccccccccccccchhHHHHH
Q 041491 427 -----------------------VNDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 427 -----------------------~~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
....+++++.+++.+||..||.+|++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 308 (364)
T 3qyz_A 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 308 (364)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCH
Confidence 012344568899999999999999853
No 221
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.3e-39 Score=320.47 Aligned_cols=230 Identities=23% Similarity=0.306 Sum_probs=184.1
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecC------Cee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNG------NFE 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~ 289 (467)
..+|++.+.||+|+||.||+|++. +|+.||||++.... ....+|+++++.++||||+++++++... .+.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 347999999999999999999986 48999999986442 2234799999999999999999988432 246
Q ss_pred eEEEecccCCCHHHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC-CcEEEeccccc
Q 041491 290 ALVLEYMANGSLEKCLY---SSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD-MVAHLSDFGIA 365 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~-~~~kl~Dfg~a 365 (467)
++||||+++ ++.+.+. .....+++..+..++.|++.||+||| ++||+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999976 5655543 34557999999999999999999999 9999999999999999965 57899999999
Q ss_pred eecCCC----CccccccccccccccCC-CCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH-------------
Q 041491 366 KLLNGK----ESMRTQTLATIEYGREG-QVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV------------- 427 (467)
Q Consensus 366 ~~~~~~----~~~~~~~~~~pe~~~~~-~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~------------- 427 (467)
+..... ...++..|.+||++.+. .++.++|||||||++|||++|+.||.+....+ .+.+..
T Consensus 205 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 205 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp EECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHHH
T ss_pred hhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHh
Confidence 876433 23457779999988664 78999999999999999999999997643211 111111
Q ss_pred ----------------------hhhcccccccccccccccchhHHHHHHH
Q 041491 428 ----------------------NDFLPISVMNVVDTSLLRREDKYFAAKK 455 (467)
Q Consensus 428 ----------------------~~~~~~~~~~~i~~~l~~~~~~r~~~~~ 455 (467)
....++++.+++.+||..||.+|++..+
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e 333 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 333 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHH
Confidence 1223556899999999999999986543
No 222
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5e-39 Score=305.97 Aligned_cols=234 Identities=24% Similarity=0.315 Sum_probs=187.6
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeec----------
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN---------- 285 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---------- 285 (467)
.++|++.+.||+|+||.||+|++. +++.||+|++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 468999999999999999999985 5899999998653 3345778899999999999999999998754
Q ss_pred ---CCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecc
Q 041491 286 ---GNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDF 362 (467)
Q Consensus 286 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 362 (467)
.+..++||||+++++|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 45779999999999999999876667889999999999999999999 999999999999999999999999999
Q ss_pred ccceecCCC-------------------CccccccccccccccCC-CCCCcccchhhHHHHHHHhcCCCCCCcccccccc
Q 041491 363 GIAKLLNGK-------------------ESMRTQTLATIEYGREG-QVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMN 422 (467)
Q Consensus 363 g~a~~~~~~-------------------~~~~~~~~~~pe~~~~~-~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~ 422 (467)
|++...... ...++..|.+||...+. .++.++|||||||++|||++ ||.........
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~ 237 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI 237 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHH
Confidence 999876421 12356678999988754 78999999999999999998 66432211111
Q ss_pred HHHHHh----------hhcccccccccccccccchhHHHHHHHHHH
Q 041491 423 LKNWVN----------DFLPISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 423 ~~~~~~----------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
...... ...++.+.+++.+||..||.+|++ +.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps-~~~ll 282 (303)
T 1zy4_A 238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG-ARTLL 282 (303)
T ss_dssp HHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCC-HHHHH
T ss_pred HHhccccccccCccccccchHHHHHHHHHHHhcCcccCcC-HHHHh
Confidence 111111 111223789999999999999975 44443
No 223
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=316.63 Aligned_cols=248 Identities=21% Similarity=0.288 Sum_probs=199.6
Q ss_pred cHHHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecC
Q 041491 209 SYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNG 286 (467)
Q Consensus 209 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 286 (467)
..+++.+..++|++.+.||+|+||.||+|.+. ..||+|+++... ....+.+.+|+.++++++||||+++++++.+.
T Consensus 24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~--~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp CGGGSSSCCSCEECCCBCCCSSSSEEEEEEES--SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred ccccccCCHHHeEEeeEeccCCceEEEEEEEc--CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 34556667789999999999999999999874 359999987543 23345678899999999999999999999999
Q ss_pred CeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccce
Q 041491 287 NFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366 (467)
Q Consensus 287 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 366 (467)
+..++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++ ++.+||+|||+++
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFS 177 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred CceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcc
Confidence 9999999999999999999776667999999999999999999999 99999999999999998 6799999999987
Q ss_pred ecCCC----------CccccccccccccccC---------CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH
Q 041491 367 LLNGK----------ESMRTQTLATIEYGRE---------GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV 427 (467)
Q Consensus 367 ~~~~~----------~~~~~~~~~~pe~~~~---------~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~ 427 (467)
..... ...++..|.+||.... ..++.++||||||+++|||++|+.||........ .....
T Consensus 178 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~ 256 (319)
T 2y4i_B 178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-IWQMG 256 (319)
T ss_dssp ----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-HHHHH
T ss_pred ccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHhc
Confidence 65321 1235667889998764 4578899999999999999999999976433221 11111
Q ss_pred h--------hhcccccccccccccccchhHHHHHHHHHHHHHHhc
Q 041491 428 N--------DFLPISVMNVVDTSLLRREDKYFAAKKQCVSSALSL 464 (467)
Q Consensus 428 ~--------~~~~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~l 464 (467)
. ..++..+.+++.+|+..+|.+|+ ++.++++.+.++
T Consensus 257 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-t~~~l~~~l~~l 300 (319)
T 2y4i_B 257 TGMKPNLSQIGMGKEISDILLFCWAFEQEERP-TFTKLMDMLEKL 300 (319)
T ss_dssp TTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSC-CHHHHHHHHTTC
T ss_pred cCCCCCCCcCCCCHHHHHHHHHHhcCChhhCc-CHHHHHHHHHHH
Confidence 1 12455789999999999999996 677777776543
No 224
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.5e-39 Score=309.27 Aligned_cols=234 Identities=24% Similarity=0.294 Sum_probs=191.4
Q ss_pred HhccCccCCccCcccceeEEEEEec--CCCeEEEEEeecccc--cchHHHHHHHHHHHcC---CCCCceeEEEEee----
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL--DGMEVAIKVFHLQFD--GALKSFDAECEVLKSV---RHRNLVKIISSCS---- 284 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~---- 284 (467)
..++|++.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999984 588999999875432 2234677888887766 8999999999987
Q ss_pred -cCCeeeEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecc
Q 041491 285 -NGNFEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDF 362 (467)
Q Consensus 285 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Df 362 (467)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5667899999997 59999886654 35899999999999999999999 999999999999999999999999999
Q ss_pred ccceecCCC----CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHH-----------
Q 041491 363 GIAKLLNGK----ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWV----------- 427 (467)
Q Consensus 363 g~a~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~----------- 427 (467)
|+++..... ...++..|.+||...+..++.++|||||||++|||++|+.||......+ .+....
T Consensus 165 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDW 243 (326)
T ss_dssp CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCGGGS
T ss_pred cccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCcccC
Confidence 999876532 2345677899999998899999999999999999999999997643221 111111
Q ss_pred ----------------------hhhcccccccccccccccchhHHHHHH
Q 041491 428 ----------------------NDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 428 ----------------------~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
...+++.+.+++.+||..||.+|++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 292 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY 292 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHH
Confidence 112344577899999999999998643
No 225
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=305.15 Aligned_cols=236 Identities=22% Similarity=0.270 Sum_probs=189.1
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc----ccchHHHHHHHHHHHcCCCCCceeEEEEe--ecCCee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF----DGALKSFDAECEVLKSVRHRNLVKIISSC--SNGNFE 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~--~~~~~~ 289 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|+++... ......+.+|++++++++||||+++++++ .+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 368999999999999999999986 48899999997542 23457789999999999999999999998 445688
Q ss_pred eEEEecccCCCHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 290 ALVLEYMANGSLEKCLYSS-NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
++||||++++ +.+++... ...+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999886 66666543 457899999999999999999999 999999999999999999999999999999876
Q ss_pred CCC-------CccccccccccccccCCC--CCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh------hhccc
Q 041491 369 NGK-------ESMRTQTLATIEYGREGQ--VSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN------DFLPI 433 (467)
Q Consensus 369 ~~~-------~~~~~~~~~~pe~~~~~~--~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~------~~~~~ 433 (467)
... ...++..|.+||...+.. ++.++||||||+++|||++|+.||......+ ....... ...++
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~ 238 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK-LFENIGKGSYAIPGDCGP 238 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHCCCCCCSSSCH
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH-HHHHHhcCCCCCCCccCH
Confidence 532 123567789999876543 3779999999999999999999997642221 1111111 12344
Q ss_pred ccccccccccccchhHHHHHHHHHH
Q 041491 434 SVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 434 ~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
.+.+++.+||..||.+|++ +.|++
T Consensus 239 ~l~~li~~~l~~dp~~Rps-~~~ll 262 (305)
T 2wtk_C 239 PLSDLLKGMLEYEPAKRFS-IRQIR 262 (305)
T ss_dssp HHHHHHHHHTCSSTTTSCC-HHHHH
T ss_pred HHHHHHHHHccCChhhCCC-HHHHh
Confidence 5899999999999999985 44444
No 226
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.6e-39 Score=337.13 Aligned_cols=231 Identities=24% Similarity=0.330 Sum_probs=189.5
Q ss_pred CccCcccceeEEEEEec---CCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEEecccC
Q 041491 224 SLIGIGSFGTVYKGRFL---DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVLEYMAN 298 (467)
Q Consensus 224 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 298 (467)
+.||+|+||.||+|.+. .++.||||+++.... ...+.+.+|++++++++||||+++++++..+ ..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CEEEEEEccCC
Confidence 47999999999999764 367899999976432 3357899999999999999999999999754 57899999999
Q ss_pred CCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCCc-----
Q 041491 299 GSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKES----- 373 (467)
Q Consensus 299 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~----- 373 (467)
|+|.+++.. ...+++..+..++.|++.||+||| ++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 454 g~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 999999964 456899999999999999999999 99999999999999999999999999999987654321
Q ss_pred ---cccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHh--------hhccccccccccc
Q 041491 374 ---MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVN--------DFLPISVMNVVDT 441 (467)
Q Consensus 374 ---~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~ 441 (467)
..+..|.|||++....++.++|||||||++|||+| |+.||.+....+ ....+. ..+++++.+++..
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~~~~~p~~~~~~l~~li~~ 607 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGERMGCPAGCPREMYDLMNL 607 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 23456899999998899999999999999999998 999997643332 222221 2345568999999
Q ss_pred ccccchhHHHHHHHHHHHHHH
Q 041491 442 SLLRREDKYFAAKKQCVSSAL 462 (467)
Q Consensus 442 ~l~~~~~~r~~~~~~~~~~l~ 462 (467)
|+..||++|+ ++.+++..|.
T Consensus 608 cl~~dP~~RP-s~~~l~~~L~ 627 (635)
T 4fl3_A 608 CWTYDVENRP-GFAAVELRLR 627 (635)
T ss_dssp HTCSSTTTSC-CHHHHHHHHH
T ss_pred HcCCCHhHCc-CHHHHHHHHH
Confidence 9999999996 4445554443
No 227
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1e-38 Score=301.85 Aligned_cols=237 Identities=22% Similarity=0.293 Sum_probs=195.9
Q ss_pred HHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
...++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999986 58999999997543 2345778999999999999999999999999999999
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC---CcEEEeccccceec
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD---MVAHLSDFGIAKLL 368 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~a~~~ 368 (467)
||||+++++|.+++... ..+++..++.++.|++.||.||| ++|++||||||+||+++.+ +.+||+|||++...
T Consensus 99 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999888543 46899999999999999999999 9999999999999999764 47999999999876
Q ss_pred CCCCc----cccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHh----------hhcccc
Q 041491 369 NGKES----MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVN----------DFLPIS 434 (467)
Q Consensus 369 ~~~~~----~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~----------~~~~~~ 434 (467)
..... .++..|.+||...+ .++.++||||||+++|+|++|+.||......+ ....... ..+++.
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 252 (287)
T 2wei_A 175 QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKYAFDLPQWRTISDD 252 (287)
T ss_dssp CCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCSGGGTTSCHH
T ss_pred cCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCchhhhhcCHH
Confidence 54332 35667899998765 48999999999999999999999997643221 1111111 234556
Q ss_pred cccccccccccchhHHHHHHHHHH
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
+.+++.+||..+|.+|++ +.|++
T Consensus 253 ~~~li~~~l~~dp~~Rps-~~ell 275 (287)
T 2wei_A 253 AKDLIRKMLTFHPSLRIT-ATQCL 275 (287)
T ss_dssp HHHHHHHHTCSSGGGSCC-HHHHH
T ss_pred HHHHHHHHcccChhhCcC-HHHHh
Confidence 899999999999999985 33443
No 228
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.8e-39 Score=315.24 Aligned_cols=231 Identities=21% Similarity=0.257 Sum_probs=187.4
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeecCCee----
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFE---- 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---- 289 (467)
.++|.+.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999886 489999999975432 2356788999999999999999999999877654
Q ss_pred --eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 290 --ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 290 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
++||||++ ++|.+.+. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 58888763 34899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCC--ccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCcccccccc----------------------
Q 041491 368 LNGKE--SMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMN---------------------- 422 (467)
Q Consensus 368 ~~~~~--~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~---------------------- 422 (467)
..... ..++..|.+||...+ ..++.++|||||||++|||++|+.||.+....+..
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 273 (371)
T 4exu_A 194 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 273 (371)
T ss_dssp ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHH
T ss_pred cccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhh
Confidence 65432 345778899998876 78899999999999999999999999764211100
Q ss_pred HHHH--------------HhhhcccccccccccccccchhHHHHHH
Q 041491 423 LKNW--------------VNDFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 423 ~~~~--------------~~~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
...+ .....++.+.+++.+||..||.+|++..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 319 (371)
T 4exu_A 274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 319 (371)
T ss_dssp HHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred hhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHH
Confidence 0001 0123355689999999999999998543
No 229
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.7e-39 Score=334.76 Aligned_cols=245 Identities=21% Similarity=0.287 Sum_probs=200.8
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEecC----CCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecC
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFLD----GMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNG 286 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 286 (467)
+..+..++|++.+.||+|+||.||+|.+.. +..||+|.++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~- 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE- 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-
Confidence 444556789999999999999999998753 4579999986543 2344678999999999999999999999854
Q ss_pred CeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccce
Q 041491 287 NFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366 (467)
Q Consensus 287 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 366 (467)
+..++||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence 5689999999999999999876667999999999999999999999 9999999999999999999999999999998
Q ss_pred ecCCCC------ccccccccccccccCCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHH--------hhhc
Q 041491 367 LLNGKE------SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWV--------NDFL 431 (467)
Q Consensus 367 ~~~~~~------~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~--------~~~~ 431 (467)
...... ...+..|.|||......++.++|||||||++|||++ |..||.+....+ ....+ ...+
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~i~~~~~~~~~~~~ 617 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGERLPMPPNC 617 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHHTCCCCCCTTC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCCCCCCCccc
Confidence 765432 123456899999988899999999999999999997 999997643322 11111 1234
Q ss_pred ccccccccccccccchhHHHHHHHHHHHHHHh
Q 041491 432 PISVMNVVDTSLLRREDKYFAAKKQCVSSALS 463 (467)
Q Consensus 432 ~~~~~~~i~~~l~~~~~~r~~~~~~~~~~l~~ 463 (467)
++.+.+++.+||..||.+|+ ++.+++..|.+
T Consensus 618 ~~~l~~li~~~l~~dP~~RP-s~~el~~~L~~ 648 (656)
T 2j0j_A 618 PPTLYSLMTKCWAYDPSRRP-RFTELKAQLST 648 (656)
T ss_dssp CHHHHHHHHHHTCSSGGGSC-CHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCc-CHHHHHHHHHH
Confidence 45689999999999999996 56666665544
No 230
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.3e-39 Score=311.97 Aligned_cols=244 Identities=23% Similarity=0.310 Sum_probs=195.4
Q ss_pred ccHHHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeeccc--ccchHHHHHHHHHHHcCC--CCCceeEEEEe
Q 041491 208 FSYQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--DGALKSFDAECEVLKSVR--HRNLVKIISSC 283 (467)
Q Consensus 208 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~ 283 (467)
+.++.+.+..++|++.+.||+|+||.||+|.+.+++.||+|++.... ....+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 44444556678899999999999999999999889999999997543 234577899999999997 59999999999
Q ss_pred ecCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccc
Q 041491 284 SNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFG 363 (467)
Q Consensus 284 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 363 (467)
...+..++||| +.+++|.+++... ..+++..+..++.|++.||.||| ++||+||||||+||++++ +.+||+|||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeecc
Confidence 99999999999 5688999998654 47899999999999999999999 999999999999999975 799999999
Q ss_pred cceecCCCC-------ccccccccccccccC-----------CCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHH
Q 041491 364 IAKLLNGKE-------SMRTQTLATIEYGRE-----------GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKN 425 (467)
Q Consensus 364 ~a~~~~~~~-------~~~~~~~~~pe~~~~-----------~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~ 425 (467)
+++...... ..++..|.+||.... ..++.++||||||+++|||++|+.||............
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251 (313)
T ss_dssp SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence 998765432 245778899998765 47888999999999999999999999764333222233
Q ss_pred HHhh--------hcccccccccccccccchhHHHHHHHHHH
Q 041491 426 WVND--------FLPISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 426 ~~~~--------~~~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
.... ..+..+.+++.+||..||.+|++ +.|++
T Consensus 252 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-~~ell 291 (313)
T 3cek_A 252 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS-IPELL 291 (313)
T ss_dssp HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC-HHHHH
T ss_pred HHhcccccCCcccchHHHHHHHHHHccCCcccCcC-HHHHh
Confidence 3222 12335889999999999999985 33443
No 231
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-38 Score=310.60 Aligned_cols=231 Identities=22% Similarity=0.275 Sum_probs=189.6
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecC-----Cee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNG-----NFE 289 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 289 (467)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999986 48999999996443 23346678999999999999999999988654 678
Q ss_pred eEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 290 ALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
++||||++ ++|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 589998865 46899999999999999999999 9999999999999999999999999999998765
Q ss_pred CCC---------------cccccccccccccc-CCCCCCcccchhhHHHHHHHhcCCCCCCccccccc------------
Q 041491 370 GKE---------------SMRTQTLATIEYGR-EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEM------------ 421 (467)
Q Consensus 370 ~~~---------------~~~~~~~~~pe~~~-~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~------------ 421 (467)
... ..++..|.+||... ...++.++|||||||++|||++|+.||.+....+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence 321 13466789999765 47789999999999999999999999975421110
Q ss_pred -----------cHHHH--------------HhhhcccccccccccccccchhHHHHH
Q 041491 422 -----------NLKNW--------------VNDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 422 -----------~~~~~--------------~~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
...++ ....+++.+.+++.+||..||.+|++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 300 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCH
Confidence 01111 112455668899999999999999853
No 232
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=319.25 Aligned_cols=192 Identities=23% Similarity=0.295 Sum_probs=153.2
Q ss_pred ccCcc-CCccCcccceeEEEEEec---CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEee--cCCeeeE
Q 041491 218 DHFSE-KSLIGIGSFGTVYKGRFL---DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCS--NGNFEAL 291 (467)
Q Consensus 218 ~~y~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~l 291 (467)
+.|++ .++||+|+||.||+|++. +++.||+|++... .....+.+|+.++++++||||+++++++. .....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 45666 458999999999999975 4789999998644 23357889999999999999999999994 4678999
Q ss_pred EEecccCCCHHHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee----cCCCcEEE
Q 041491 292 VLEYMANGSLEKCLYSS--------NGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL----DDDMVAHL 359 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll----~~~~~~kl 359 (467)
||||+++ +|.+++... ...+++..++.++.|++.||+||| ++||+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999965 787776421 124899999999999999999999 9999999999999999 67789999
Q ss_pred eccccceecCCC--------CccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCc
Q 041491 360 SDFGIAKLLNGK--------ESMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCE 415 (467)
Q Consensus 360 ~Dfg~a~~~~~~--------~~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~ 415 (467)
+|||+|+..... ...++..|.|||.+.+ ..++.++|||||||++|||+||+.||..
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999999876532 1245777899998876 4589999999999999999999999964
No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.3e-38 Score=308.12 Aligned_cols=239 Identities=22% Similarity=0.252 Sum_probs=179.5
Q ss_pred HHHHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeecCC--
Q 041491 211 QELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSNGN-- 287 (467)
Q Consensus 211 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-- 287 (467)
.+.....++|++.+.||+|+||.||+|++. +++.||+|++... ........+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455677789999999999999999999986 4899999998654 233456678888889999999999999986533
Q ss_pred -----eeeEEEecccCCCHHHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC-CCcEE
Q 041491 288 -----FEALVLEYMANGSLEKCLY---SSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD-DMVAH 358 (467)
Q Consensus 288 -----~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~-~~~~k 358 (467)
..++||||+++ +|.+.+. .....+++..+..++.|++.||.|||. +++||+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEE
Confidence 37899999987 5444332 244578999999999999999999993 3789999999999999997 89999
Q ss_pred EeccccceecCCCC----ccccccccccccccCC-CCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhh----
Q 041491 359 LSDFGIAKLLNGKE----SMRTQTLATIEYGREG-QVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVND---- 429 (467)
Q Consensus 359 l~Dfg~a~~~~~~~----~~~~~~~~~pe~~~~~-~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~---- 429 (467)
|+|||+++...... ..++..|.+||...+. .++.++|||||||++|||+||+.||......+ .+......
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~ 251 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHEIVRVLGCP 251 (360)
T ss_dssp ECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCC
T ss_pred EeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHHHHHHcCCC
Confidence 99999998775433 2456778999987654 48999999999999999999999997643221 11111110
Q ss_pred ---------------------------h-------cccccccccccccccchhHHHHH
Q 041491 430 ---------------------------F-------LPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 430 ---------------------------~-------~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
. .++.+.+++.+||..||.+|++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 309 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKP 309 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCH
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCH
Confidence 0 23358899999999999999854
No 234
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.4e-38 Score=311.63 Aligned_cols=198 Identities=24% Similarity=0.297 Sum_probs=170.5
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCC-CC-----CceeEEEEeecCCe
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HR-----NLVKIISSCSNGNF 288 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~ 288 (467)
..++|++.+.||+|+||.||+|.+. +++.||+|+++.. ......+..|+.+++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 3578999999999999999999886 4889999999744 233466778999988875 44 49999999999999
Q ss_pred eeEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeec--CCCcEEEeccccc
Q 041491 289 EALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLD--DDMVAHLSDFGIA 365 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~--~~~~~kl~Dfg~a 365 (467)
.++||||+++ +|.+++.... ..+++..+..++.|++.||.|||. ++.||+||||||+|||++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 9999999964 9999887654 468999999999999999999992 147999999999999994 4778999999999
Q ss_pred eecCCC--CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 366 KLLNGK--ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 366 ~~~~~~--~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
+..... ...++..|.|||...+..++.++|||||||++|||+||+.||.+.
T Consensus 209 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 887643 345677899999999999999999999999999999999999764
No 235
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.2e-39 Score=339.68 Aligned_cols=238 Identities=21% Similarity=0.240 Sum_probs=196.2
Q ss_pred hccCccCCccCcccceeEEEEEec--CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeecCCe-----
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL--DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSNGNF----- 288 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 288 (467)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 378999999999999999999986 58999999986443 2344678899999999999999999999987655
Q ss_pred eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 289 EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.|+||||++|++|.+++.. .+++.+++.++.|++.||.||| ++||+||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999987643 6899999999999999999999 9999999999999999986 8999999999987
Q ss_pred CCCC-ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhhhcccccccccccccccch
Q 041491 369 NGKE-SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVNDFLPISVMNVVDTSLLRRE 447 (467)
Q Consensus 369 ~~~~-~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 447 (467)
.... ..++..|.+||++.++. +.++|||||||++|||++|..||.......... .......++.+.++|.+||..||
T Consensus 232 ~~~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP 309 (681)
T 2pzi_A 232 NSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLPE-DDPVLKTYDSYGRLLRRAIDPDP 309 (681)
T ss_dssp TCCSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCCT-TCHHHHHCHHHHHHHHHHTCSSG
T ss_pred ccCCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccccc-cccccccCHHHHHHHhhhccCCh
Confidence 6543 34678899999876654 889999999999999999999987643332210 01111234568999999999999
Q ss_pred hHHHHHHHHHHHHHHh
Q 041491 448 DKYFAAKKQCVSSALS 463 (467)
Q Consensus 448 ~~r~~~~~~~~~~l~~ 463 (467)
.+|+++++++...+..
T Consensus 310 ~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 310 RQRFTTAEEMSAQLTG 325 (681)
T ss_dssp GGSCSSHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHH
Confidence 9999888888777654
No 236
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.4e-38 Score=306.16 Aligned_cols=195 Identities=21% Similarity=0.247 Sum_probs=171.1
Q ss_pred hccCccCCccCcccceeEEEEEe-c-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCC------CceeEEEEeecCCe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRF-L-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHR------NLVKIISSCSNGNF 288 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~~~ 288 (467)
.++|++.+.||+|+||.||+|.+ . +++.||+|+++.. ....+.+.+|+++++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999987 3 5889999998744 33456788999999988655 59999999999999
Q ss_pred eeEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC--------------
Q 041491 289 EALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD-------------- 353 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~-------------- 353 (467)
.++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999886654 36899999999999999999999 999999999999999987
Q ss_pred -----CCcEEEeccccceecCCCC--ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 354 -----DMVAHLSDFGIAKLLNGKE--SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 354 -----~~~~kl~Dfg~a~~~~~~~--~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
++.+||+|||+++...... ..++..|.+||...+..++.++|||||||++|||++|+.||...
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 6689999999998765432 34677899999999989999999999999999999999999754
No 237
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=309.82 Aligned_cols=231 Identities=21% Similarity=0.263 Sum_probs=187.1
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc--cchHHHHHHHHHHHcCCCCCceeEEEEeecCCe-----
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD--GALKSFDAECEVLKSVRHRNLVKIISSCSNGNF----- 288 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 288 (467)
.++|.+.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 368999999999999999999986 489999999975432 234678899999999999999999999987654
Q ss_pred -eeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 289 -EALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 289 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
.++||||++ ++|.+++. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 58888763 34899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCC--ccccccccccccccC-CCCCCcccchhhHHHHHHHhcCCCCCCcccccccc----------------------
Q 041491 368 LNGKE--SMRTQTLATIEYGRE-GQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMN---------------------- 422 (467)
Q Consensus 368 ~~~~~--~~~~~~~~~pe~~~~-~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~---------------------- 422 (467)
..... ..++..|.+||...+ ..++.++|||||||++|||++|+.||.+....+..
T Consensus 176 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 255 (353)
T 3coi_A 176 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 255 (353)
T ss_dssp --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHH
T ss_pred CCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHH
Confidence 65432 345777899998776 67899999999999999999999999764321100
Q ss_pred HHHHHh--------------hhcccccccccccccccchhHHHHHH
Q 041491 423 LKNWVN--------------DFLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 423 ~~~~~~--------------~~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
...+.. ...++.+.+++.+||..||.+|++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~ 301 (353)
T 3coi_A 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 301 (353)
T ss_dssp HHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred HHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHH
Confidence 000100 12345688999999999999998643
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.9e-38 Score=306.75 Aligned_cols=232 Identities=19% Similarity=0.252 Sum_probs=168.3
Q ss_pred HhccCccCC-ccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEEeec----CCee
Q 041491 216 ATDHFSEKS-LIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISSCSN----GNFE 289 (467)
Q Consensus 216 ~~~~y~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~ 289 (467)
..++|.+.+ .||+|+||.||+|.+. +++.||+|++.... .........++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356888855 6999999999999987 58999999986431 222223334567799999999999876 4568
Q ss_pred eEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC---CCcEEEeccccc
Q 041491 290 ALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD---DMVAHLSDFGIA 365 (467)
Q Consensus 290 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a 365 (467)
++||||+++|+|.+++.... ..+++.+++.++.|++.||.||| ++||+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999997654 36999999999999999999999 999999999999999976 456999999999
Q ss_pred eecCCCC---ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccccc--HHHH-----------Hhh
Q 041491 366 KLLNGKE---SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMN--LKNW-----------VND 429 (467)
Q Consensus 366 ~~~~~~~---~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~--~~~~-----------~~~ 429 (467)
+...... ..++..|.+||...+..++.++||||||+++|||++|+.||......... .... ...
T Consensus 179 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (336)
T 3fhr_A 179 KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWS 258 (336)
T ss_dssp EEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTST
T ss_pred eeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhc
Confidence 8765432 34567789999998888899999999999999999999999764332211 0000 012
Q ss_pred hcccccccccccccccchhHHHHHH
Q 041491 430 FLPISVMNVVDTSLLRREDKYFAAK 454 (467)
Q Consensus 430 ~~~~~~~~~i~~~l~~~~~~r~~~~ 454 (467)
.+++.+.+++.+||..||.+|++..
T Consensus 259 ~~~~~~~~li~~~L~~dP~~Rpt~~ 283 (336)
T 3fhr_A 259 EVSEDAKQLIRLLLKTDPTERLTIT 283 (336)
T ss_dssp TCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred cCCHHHHHHHHHHCCCChhHCcCHH
Confidence 3456689999999999999998543
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.2e-38 Score=307.12 Aligned_cols=234 Identities=24% Similarity=0.253 Sum_probs=172.8
Q ss_pred HhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc-cchHHHHHHHH-HHHcCCCCCceeEEEEeecCCeeeEE
Q 041491 216 ATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-GALKSFDAECE-VLKSVRHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 216 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv 292 (467)
..++|++.+.||+|+||.||+|.+. +++.||+|+++.... .....+..|+. +++.++||||+++++++...+..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 4578999999999999999999986 589999999976532 23345556665 67778999999999999999999999
Q ss_pred EecccCCCHHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeecCCCcEEEecccccee
Q 041491 293 LEYMANGSLEKCLYS----SNGILDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
|||+++ +|.+++.. ....+++..+..++.|++.||.||| +. ||+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 999976 77776642 2457899999999999999999999 88 999999999999999999999999999987
Q ss_pred cCCCC----ccccccccccccc----cCCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHH-----------Hh
Q 041491 368 LNGKE----SMRTQTLATIEYG----REGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNW-----------VN 428 (467)
Q Consensus 368 ~~~~~----~~~~~~~~~pe~~----~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~-----------~~ 428 (467)
..... ..++..|.+||.. ....++.++||||||+++|||++|+.||.........+... ..
T Consensus 176 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3aln_A 176 LVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEE 255 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSS
T ss_pred cccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCccc
Confidence 65432 2456778999998 45678999999999999999999999997532111100000 01
Q ss_pred hhcccccccccccccccchhHHHHH
Q 041491 429 DFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 429 ~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
..+++.+.+++.+||..||.+|++.
T Consensus 256 ~~~~~~l~~li~~~l~~dp~~Rps~ 280 (327)
T 3aln_A 256 REFSPSFINFVNLCLTKDESKRPKY 280 (327)
T ss_dssp CCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCH
Confidence 2245568899999999999999753
No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=302.90 Aligned_cols=233 Identities=23% Similarity=0.246 Sum_probs=176.5
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccccc--chHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeEEE
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG--ALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 293 (467)
.++|++.+.||+|+||.||+|++. +|+.||+|++...... ..+.+..+..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 468999999999999999999986 5899999999765322 2233445556788889999999999999999999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
||+ ++.+..+.......+++..+..++.|++.||.||| ++ ||+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 56676666555567999999999999999999999 85 99999999999999999999999999997664432
Q ss_pred ----cccccccccccccc-----CCCCCCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhh---------hcccc
Q 041491 373 ----SMRTQTLATIEYGR-----EGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVND---------FLPIS 434 (467)
Q Consensus 373 ----~~~~~~~~~pe~~~-----~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~---------~~~~~ 434 (467)
..++..|.+||... ...++.++||||||+++|||++|+.||................ .+++.
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHH
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHH
Confidence 24567789999984 5668899999999999999999999997633222222222221 23456
Q ss_pred cccccccccccchhHHHHH
Q 041491 435 VMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~ 453 (467)
+.+++.+||..||.+|++.
T Consensus 260 l~~li~~~l~~dp~~Rps~ 278 (318)
T 2dyl_A 260 FQSFVKDCLTKDHRKRPKY 278 (318)
T ss_dssp HHHHHHHHTCSCTTTSCCH
T ss_pred HHHHHHHHccCChhHCcCH
Confidence 8999999999999999753
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.4e-38 Score=306.39 Aligned_cols=195 Identities=21% Similarity=0.257 Sum_probs=168.5
Q ss_pred hccCccCCccCcccceeEEEEEecC-C-CeEEEEEeecccccchHHHHHHHHHHHcCCCCC------ceeEEEEeecCCe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFLD-G-MEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN------LVKIISSCSNGNF 288 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 288 (467)
.++|++.+.||+|+||.||+|.+.. + +.||+|+++.. ....+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 4689999999999999999998853 4 68999999754 234567888999999987655 9999999999999
Q ss_pred eeEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee----------------
Q 041491 289 EALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL---------------- 351 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll---------------- 351 (467)
.++||||+ ++++.+++.... ..+++.++..++.|++.||+||| ++||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 556666665443 47899999999999999999999 9999999999999999
Q ss_pred ---cCCCcEEEeccccceecCCCC--ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 352 ---DDDMVAHLSDFGIAKLLNGKE--SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 352 ---~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
+.++.+||+|||+++...... ..++..|.+||.+.+..++.++|||||||++|||++|+.||...
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 567899999999998765432 35677899999999999999999999999999999999999764
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.2e-39 Score=310.11 Aligned_cols=241 Identities=22% Similarity=0.216 Sum_probs=195.5
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccccc------chHHHHHHHHHHHcCC--CCCceeEEEE
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDG------ALKSFDAECEVLKSVR--HRNLVKIISS 282 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~ 282 (467)
+.....++|++.+.||+|+||.||+|.+. +++.||+|++...... ..+.+.+|+.++++++ ||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 33445678999999999999999999875 5899999999765321 2355778999999996 5999999999
Q ss_pred eecCCeeeEEEecccC-CCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeec-CCCcEEEe
Q 041491 283 CSNGNFEALVLEYMAN-GSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLD-DDMVAHLS 360 (467)
Q Consensus 283 ~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-~~~~~kl~ 360 (467)
+...+..++|||++.+ ++|.+++.. .+.+++..++.++.|++.||+||| ++||+||||||+||+++ +++.+||+
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEe
Confidence 9999999999999976 899999865 356899999999999999999999 99999999999999999 78899999
Q ss_pred ccccceecCCCC---ccccccccccccccCCCC-CCcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhhhcccccc
Q 041491 361 DFGIAKLLNGKE---SMRTQTLATIEYGREGQV-SPKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVNDFLPISVM 436 (467)
Q Consensus 361 Dfg~a~~~~~~~---~~~~~~~~~pe~~~~~~~-~~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 436 (467)
|||+++...... ..++..|.+||......+ +.++||||||+++|||+||+.||......... .......+++.+.
T Consensus 193 Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~ 271 (320)
T 3a99_A 193 DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG-QVFFRQRVSSECQ 271 (320)
T ss_dssp CCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHC-CCCCSSCCCHHHH
T ss_pred eCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcc-cccccccCCHHHH
Confidence 999998876432 245677899998876665 67899999999999999999999753211000 0011234566799
Q ss_pred cccccccccchhHHHHHHHHHH
Q 041491 437 NVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 437 ~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
+++.+||..||.+|++ +.+++
T Consensus 272 ~li~~~l~~dp~~Rps-~~~ll 292 (320)
T 3a99_A 272 HLIRWCLALRPSDRPT-FEEIQ 292 (320)
T ss_dssp HHHHHHTCSSGGGSCC-HHHHH
T ss_pred HHHHHHccCChhhCcC-HHHHh
Confidence 9999999999999975 43443
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=308.65 Aligned_cols=241 Identities=23% Similarity=0.237 Sum_probs=185.7
Q ss_pred HHHHHhccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc------cchHHHHHHHHHHHcC----CCCCceeEE
Q 041491 212 ELLLATDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD------GALKSFDAECEVLKSV----RHRNLVKII 280 (467)
Q Consensus 212 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~~~ 280 (467)
+.....++|++.+.||+|+||.||+|++. +++.||+|+++.... .....+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 44556789999999999999999999875 588999999965432 1234456799999988 899999999
Q ss_pred EEeecCCeeeEEEec-ccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeec-CCCcEE
Q 041491 281 SSCSNGNFEALVLEY-MANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLD-DDMVAH 358 (467)
Q Consensus 281 ~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~-~~~~~k 358 (467)
+++...+..++|||| +.+++|.+++... +.+++..++.++.|++.||+||| ++||+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 7899999998653 46899999999999999999999 99999999999999999 889999
Q ss_pred EeccccceecCCCC---ccccccccccccccCCCCC-CcccchhhHHHHHHHhcCCCCCCccccccccHHHHHhhhcccc
Q 041491 359 LSDFGIAKLLNGKE---SMRTQTLATIEYGREGQVS-PKSDVYGYGITLIETFTKKKPTCEIFCEEMNLKNWVNDFLPIS 434 (467)
Q Consensus 359 l~Dfg~a~~~~~~~---~~~~~~~~~pe~~~~~~~~-~~~Dv~slGvil~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 434 (467)
|+|||++....... ..++..|.+||+..+..+. .++||||||+++|||++|+.||......... .......+++.
T Consensus 181 l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~ 259 (312)
T 2iwi_A 181 LIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEA-ELHFPAHVSPD 259 (312)
T ss_dssp ECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHT-CCCCCTTSCHH
T ss_pred EEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhh-ccCCcccCCHH
Confidence 99999998776432 2456678999988776664 5899999999999999999999753210000 00011334556
Q ss_pred cccccccccccchhHHHHHHHHHH
Q 041491 435 VMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 435 ~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
+.+++.+||..+|++|++ +.|++
T Consensus 260 ~~~li~~~l~~~p~~Rps-~~e~l 282 (312)
T 2iwi_A 260 CCALIRRCLAPKPSSRPS-LEEIL 282 (312)
T ss_dssp HHHHHHHHTCSSTTTSCC-HHHHH
T ss_pred HHHHHHHHccCChhhCcC-HHHHh
Confidence 899999999999999974 44443
No 244
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=9.5e-38 Score=296.94 Aligned_cols=215 Identities=20% Similarity=0.280 Sum_probs=176.9
Q ss_pred ccCccC-CccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHH-HcCCCCCceeEEEEeec----CCeee
Q 041491 218 DHFSEK-SLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVL-KSVRHRNLVKIISSCSN----GNFEA 290 (467)
Q Consensus 218 ~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~~~~ 290 (467)
++|.+. +.||+|+||.||+|.+. +++.||+|+++.. ..+.+|+.++ +..+||||+++++++.. .+..+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 567776 78999999999999985 5899999998632 4577888888 56689999999999876 67889
Q ss_pred EEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC---CCcEEEeccccce
Q 041491 291 LVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD---DMVAHLSDFGIAK 366 (467)
Q Consensus 291 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~kl~Dfg~a~ 366 (467)
+||||+++|+|.+++.... ..+++..++.++.|++.||+||| ++||+||||||+||+++. ++.+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999997654 36899999999999999999999 999999999999999998 7899999999997
Q ss_pred ecCCCCccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc-------------ccHHHHHhhhccc
Q 041491 367 LLNGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE-------------MNLKNWVNDFLPI 433 (467)
Q Consensus 367 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~-------------~~~~~~~~~~~~~ 433 (467)
.... ..++.++||||+||++|||+||+.||....... .....-....+++
T Consensus 169 ~~~~-----------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 3m2w_A 169 ETTG-----------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 231 (299)
T ss_dssp ECTT-----------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCH
T ss_pred cccc-----------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCH
Confidence 5442 446789999999999999999999996532111 1112222345677
Q ss_pred ccccccccccccchhHHHHHHHHHH
Q 041491 434 SVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 434 ~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
++.+++.+||..||.+|++ +.|++
T Consensus 232 ~~~~li~~~l~~dP~~Rps-~~e~l 255 (299)
T 3m2w_A 232 EVKMLIRNLLKTEPTQRMT-ITEFM 255 (299)
T ss_dssp HHHHHHHHHTCSSTTTSCC-HHHHH
T ss_pred HHHHHHHHHcccChhhCCC-HHHHh
Confidence 8999999999999999985 34443
No 245
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.4e-38 Score=310.61 Aligned_cols=195 Identities=19% Similarity=0.285 Sum_probs=167.4
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCC-----------CCCceeEEEEee
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-----------HRNLVKIISSCS 284 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 284 (467)
.++|++.+.||+|+||.||+|++. +++.||+|++... ....+.+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 468999999999999999999985 5899999998744 234567889999998876 899999999987
Q ss_pred cCC----eeeEEEecccCCCHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeeec------
Q 041491 285 NGN----FEALVLEYMANGSLEKCLYSSN-GILDIFQRLSIMIDVALALEYLHFGYSN-PVVHCDIKPSNVLLD------ 352 (467)
Q Consensus 285 ~~~----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlkp~NIll~------ 352 (467)
..+ ..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++ ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 889999987643 46899999999999999999999 87 999999999999994
Q ss_pred CCCcEEEeccccceecCCC--CccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 353 DDMVAHLSDFGIAKLLNGK--ESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 353 ~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
..+.+||+|||++...... ...++..|.+||...+..++.++|||||||++|||+||+.||...
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp TEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred CcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 4458999999999877643 335677899999999999999999999999999999999999754
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.4e-38 Score=327.48 Aligned_cols=245 Identities=24% Similarity=0.312 Sum_probs=193.5
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeeccc-ccchHHHHHHHHHHHcCCCCCceeEEEEeec------CCe
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF-DGALKSFDAECEVLKSVRHRNLVKIISSCSN------GNF 288 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~ 288 (467)
.++|++.+.||+|+||.||+|.+. +|+.||+|+++... ....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 378999999999999999999885 48999999987542 3345678999999999999999999998765 677
Q ss_pred eeEEEecccCCCHHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCc---EEEeccc
Q 041491 289 EALVLEYMANGSLEKCLYSSNG--ILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMV---AHLSDFG 363 (467)
Q Consensus 289 ~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~---~kl~Dfg 363 (467)
.++||||+++|+|.+++..... .+++..++.++.|++.||+||| +.||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 8999999999999999976443 6889999999999999999999 999999999999999997764 9999999
Q ss_pred cceecCCCC----ccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcccccc-------------------
Q 041491 364 IAKLLNGKE----SMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCEE------------------- 420 (467)
Q Consensus 364 ~a~~~~~~~----~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~~------------------- 420 (467)
++....... ..++..|.+||...+..++.++|||||||++|||++|+.||.......
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence 998875433 345778899999999999999999999999999999999996421000
Q ss_pred ----cc------HHHHHhhhcccccccccccccccchhHHHHHH-------HHHHHHHHhc
Q 041491 421 ----MN------LKNWVNDFLPISVMNVVDTSLLRREDKYFAAK-------KQCVSSALSL 464 (467)
Q Consensus 421 ----~~------~~~~~~~~~~~~~~~~i~~~l~~~~~~r~~~~-------~~~~~~l~~l 464 (467)
.. ........+++.+.+++.+||..||.+|+++. -+.+..+++.
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 00 00001122345588999999999999998763 2445555543
No 247
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.8e-38 Score=315.00 Aligned_cols=229 Identities=22% Similarity=0.301 Sum_probs=178.7
Q ss_pred ccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeEEEecc
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEALVLEYM 296 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 296 (467)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.+.+..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 345567889999999998776667999999998754 235678999999876 8999999999999999999999999
Q ss_pred cCCCHHHhhhcCCCC------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCC-------------CcE
Q 041491 297 ANGSLEKCLYSSNGI------LDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDD-------------MVA 357 (467)
Q Consensus 297 ~~g~L~~~l~~~~~~------~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~-------------~~~ 357 (467)
+ |+|.+++...... .++..++.++.|++.||+||| ++||+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 5999998654321 123345789999999999999 9999999999999999754 489
Q ss_pred EEeccccceecCCCC---------ccccccccccccccC-------CCCCCcccchhhHHHHHHHhc-CCCCCCcccccc
Q 041491 358 HLSDFGIAKLLNGKE---------SMRTQTLATIEYGRE-------GQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEE 420 (467)
Q Consensus 358 kl~Dfg~a~~~~~~~---------~~~~~~~~~pe~~~~-------~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~ 420 (467)
||+|||+++...... ..++..|.|||.+.+ ..++.++|||||||++|||+| |+.||.+.....
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 999999999876432 246778899998865 678999999999999999999 999997643222
Q ss_pred ccHHHHH----------hhhcccccccccccccccchhHHHHH
Q 041491 421 MNLKNWV----------NDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 421 ~~~~~~~----------~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
....... ...+++++.+++.+||..||.+|++.
T Consensus 248 ~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 290 (434)
T 2rio_A 248 SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290 (434)
T ss_dssp HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCH
T ss_pred HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCH
Confidence 1111110 11223458899999999999999753
No 248
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=314.06 Aligned_cols=234 Identities=19% Similarity=0.288 Sum_probs=183.3
Q ss_pred HHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeEE
Q 041491 214 LLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 214 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 292 (467)
.+...+|++.+.||+|+||+||.....+++.||||++.... ...+.+|+++++++ +||||+++++++.+.+..|+|
T Consensus 20 ~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 20 IVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp EETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred EEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 34556799999999999999766555679999999986542 23456899999999 799999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC-----CCcEEEecccccee
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD-----DMVAHLSDFGIAKL 367 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~-----~~~~kl~Dfg~a~~ 367 (467)
|||++ |+|.+++........+..+..++.|++.||+||| ++||+||||||+||+++. ...+||+|||+|+.
T Consensus 97 ~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp EECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred EECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 99996 5999999776666666677899999999999999 999999999999999953 23688999999987
Q ss_pred cCCC--------Ccccccccccccccc---CCCCCCcccchhhHHHHHHHhc-CCCCCCccccccccHHHHHhh------
Q 041491 368 LNGK--------ESMRTQTLATIEYGR---EGQVSPKSDVYGYGITLIETFT-KKKPTCEIFCEEMNLKNWVND------ 429 (467)
Q Consensus 368 ~~~~--------~~~~~~~~~~pe~~~---~~~~~~~~Dv~slGvil~el~t-g~~Pf~~~~~~~~~~~~~~~~------ 429 (467)
.... ...++..|.|||.+. ...++.++|||||||++|||+| |..||........ .....
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~---~~~~~~~~~~~ 249 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA---NILLGACSLDC 249 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH---HHHTTCCCCTT
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH---HHHhccCCccc
Confidence 6532 134677889999987 4567889999999999999999 9999965322211 11111
Q ss_pred -----hcccccccccccccccchhHHHHHHHHHH
Q 041491 430 -----FLPISVMNVVDTSLLRREDKYFAAKKQCV 458 (467)
Q Consensus 430 -----~~~~~~~~~i~~~l~~~~~~r~~~~~~~~ 458 (467)
..+..+.+++.+||..||.+|++ +.+++
T Consensus 250 ~~~~~~~~~~~~~li~~~L~~dP~~Rps-~~evl 282 (432)
T 3p23_A 250 LHPEKHEDVIARELIEKMIAMDPQKRPS-AKHVL 282 (432)
T ss_dssp SCTTCHHHHHHHHHHHHHSCSSGGGSCC-HHHHH
T ss_pred cCccccccHHHHHHHHHHHhCCHhhCCC-HHHHH
Confidence 11123678999999999999975 33433
No 249
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.2e-38 Score=306.41 Aligned_cols=226 Identities=16% Similarity=0.153 Sum_probs=181.1
Q ss_pred HHhccCccCCccCcccceeEEEEEecCCCeEEEEEeeccc--------ccchHHHHHHHHHHHcCC---------CCCce
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQF--------DGALKSFDAECEVLKSVR---------HRNLV 277 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv 277 (467)
+..++|++.+.||+|+||.||+|++ +|+.||+|+++... ....+.+.+|+.+++.++ ||||+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 3457899999999999999999998 78999999997653 223477889999998885 88888
Q ss_pred eEEEEee------------------------------cCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHH
Q 041491 278 KIISSCS------------------------------NGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALA 327 (467)
Q Consensus 278 ~~~~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~ 327 (467)
++.+.+. ..+..|+||||+++|++.+.+.. ..+++..++.++.|++.|
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHH
Confidence 8877642 26789999999999976666633 568999999999999999
Q ss_pred HHHHhcCCCCCceecCCCCCCeeecCCC--------------------cEEEeccccceecCCCCccccccccccccccC
Q 041491 328 LEYLHFGYSNPVVHCDIKPSNVLLDDDM--------------------VAHLSDFGIAKLLNGKESMRTQTLATIEYGRE 387 (467)
Q Consensus 328 l~~LH~~~~~~ivH~dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~pe~~~~ 387 (467)
|+|||. ++||+||||||+|||++.++ .+||+|||+|+........++..|.|||.+.+
T Consensus 174 L~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 174 LAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCC
T ss_pred HHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcC
Confidence 999993 47899999999999999887 89999999999888777778889999999886
Q ss_pred CCCCCcccchhhHHH-HHHHhcCCCCCCccccccccH-------------HHHHhhhcccccccccccccccc
Q 041491 388 GQVSPKSDVYGYGIT-LIETFTKKKPTCEIFCEEMNL-------------KNWVNDFLPISVMNVVDTSLLRR 446 (467)
Q Consensus 388 ~~~~~~~Dv~slGvi-l~el~tg~~Pf~~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~l~~~ 446 (467)
.. +.++||||+|++ .+++++|..||.......... ..-....+++++.++|.+||..|
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d 323 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS 323 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC
Confidence 66 889999998777 788999999996421000000 00122345566888888888877
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1e-36 Score=302.71 Aligned_cols=232 Identities=16% Similarity=0.142 Sum_probs=176.4
Q ss_pred hccCccCCccCcccceeEEEEEec-CCCeEEEEEeecccc---cchHHHHHHHHHHHcCCC-CCc---------------
Q 041491 217 TDHFSEKSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD---GALKSFDAECEVLKSVRH-RNL--------------- 276 (467)
Q Consensus 217 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~ni--------------- 276 (467)
...|...+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++.++| +|.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 456788899999999999999975 599999999874322 235778999999999977 221
Q ss_pred ------eeEEEEeec-----CCeeeEEEecccCCCHHHhhh------cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 041491 277 ------VKIISSCSN-----GNFEALVLEYMANGSLEKCLY------SSNGILDIFQRLSIMIDVALALEYLHFGYSNPV 339 (467)
Q Consensus 277 ------v~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i 339 (467)
..+..++.. ....+++|+++ +++|.+++. .....+++..+..++.|++.||+||| ++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 111111111 12356777765 679998883 22446788899999999999999999 9999
Q ss_pred eecCCCCCCeeecCCCcEEEeccccceecCCC--Cccccccccccccc----------cCCCCCCcccchhhHHHHHHHh
Q 041491 340 VHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK--ESMRTQTLATIEYG----------REGQVSPKSDVYGYGITLIETF 407 (467)
Q Consensus 340 vH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~~pe~~----------~~~~~~~~~Dv~slGvil~el~ 407 (467)
+||||||+|||++.++.+||+|||+++..... ...+ ..|.+||++ ....++.++|||||||++|||+
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999876543 2234 778999988 5566888999999999999999
Q ss_pred cCCCCCCccccccccHHHH-HhhhcccccccccccccccchhHHHHH
Q 041491 408 TKKKPTCEIFCEEMNLKNW-VNDFLPISVMNVVDTSLLRREDKYFAA 453 (467)
Q Consensus 408 tg~~Pf~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~~~~r~~~ 453 (467)
||+.||......+.....+ ....+|+.+.+++.+||..||++|++.
T Consensus 312 tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~ 358 (413)
T 3dzo_A 312 CADLPNTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLP 358 (413)
T ss_dssp HSSCCCCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HCCCCCCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCH
Confidence 9999998653332211111 113466779999999999999999654
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97 E-value=3.3e-31 Score=272.15 Aligned_cols=181 Identities=18% Similarity=0.078 Sum_probs=127.6
Q ss_pred ccCcccceeEEEEEec-CCCeEEEEEeeccc----------ccchHHHHHHHHHHHcC-CCCCceeEEEEeecCCeeeEE
Q 041491 225 LIGIGSFGTVYKGRFL-DGMEVAIKVFHLQF----------DGALKSFDAECEVLKSV-RHRNLVKIISSCSNGNFEALV 292 (467)
Q Consensus 225 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 292 (467)
..+.|+.|.+..++.. -|+.||+|++.... ....+++.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3566777766665432 48999999997542 12346789999999999 699999999999999999999
Q ss_pred EecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCC
Q 041491 293 LEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKE 372 (467)
Q Consensus 293 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 372 (467)
|||++|++|.+++... +.++.. .|+.||+.||+|+| ++|||||||||+|||++++|.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999999999999654 556654 48899999999999 9999999999999999999999999999998776543
Q ss_pred c-----cccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCC
Q 041491 373 S-----MRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPT 413 (467)
Q Consensus 373 ~-----~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf 413 (467)
. .++..|++||.+.+ .+..++|+||+|++++++.++..|+
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 2 35677888888764 4677899999999988887765554
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=2.6e-27 Score=241.93 Aligned_cols=180 Identities=18% Similarity=0.180 Sum_probs=142.0
Q ss_pred CccCCccCcccceeEEEEEecCCCeEEEEEeecccc--------cchHHHHHHHHHHHcCCCCCceeEEEEeecCCeeeE
Q 041491 220 FSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD--------GALKSFDAECEVLKSVRHRNLVKIISSCSNGNFEAL 291 (467)
Q Consensus 220 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 291 (467)
+...+.||+|+||.||+|.. .++.+++|....... ...+++.+|++++++++||||+++..++...+..++
T Consensus 338 ~~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 338 KIPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ----------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 34567999999999999954 578899998643321 123457899999999999999965555556777799
Q ss_pred EEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCC
Q 041491 292 VLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGK 371 (467)
Q Consensus 292 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 371 (467)
||||+++++|.+++.. +..++.|+++||+||| ++||+||||||+|||+++ .+||+|||+|+.....
T Consensus 417 VmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 417 MMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 9999999999999854 5689999999999999 999999999999999998 9999999999988763
Q ss_pred C------------ccccccccccccccC--CCCCCcccchhhHHHHHHHhcCCCCCC
Q 041491 372 E------------SMRTQTLATIEYGRE--GQVSPKSDVYGYGITLIETFTKKKPTC 414 (467)
Q Consensus 372 ~------------~~~~~~~~~pe~~~~--~~~~~~~Dv~slGvil~el~tg~~Pf~ 414 (467)
. ..++..|.+||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2 235667888998876 567888999999999999888887774
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.92 E-value=2.3e-25 Score=208.93 Aligned_cols=165 Identities=15% Similarity=0.113 Sum_probs=125.6
Q ss_pred HHHHHHHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccc------------------cchHHHHHHHHHHHcC
Q 041491 210 YQELLLATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD------------------GALKSFDAECEVLKSV 271 (467)
Q Consensus 210 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l 271 (467)
...+......|++.+.||+|+||.||+|.+.+|+.||+|+++.... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3344455566778899999999999999996799999999964321 1245688999999999
Q ss_pred CCCCceeEEEEeecCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeee
Q 041491 272 RHRNLVKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLL 351 (467)
Q Consensus 272 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll 351 (467)
+|+++.. ++.. +..++||||++|++|.+ +.. .....++.|++.||.||| ++||+||||||+|||+
T Consensus 162 ~~~~v~~---~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl 226 (282)
T 1zar_A 162 QGLAVPK---VYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLV 226 (282)
T ss_dssp TTSSSCC---EEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEE
T ss_pred cCCCcCe---EEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEE
Confidence 8544444 4333 55699999999999988 421 234579999999999999 9999999999999999
Q ss_pred cCCCcEEEeccccceecCCCCccccccccccccccC----------CCCCCcccchh
Q 041491 352 DDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGRE----------GQVSPKSDVYG 398 (467)
Q Consensus 352 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~pe~~~~----------~~~~~~~Dv~s 398 (467)
+ ++.+||+|||+|+.... +.+||++.. ..++.++|+|.
T Consensus 227 ~-~~~vkl~DFG~a~~~~~--------~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVEVGE--------EGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp E-TTEEEECCCTTCEETTS--------TTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred E-CCcEEEEECCCCeECCC--------CCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 9 99999999999985432 456666532 33455566654
No 254
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.87 E-value=9.5e-22 Score=177.60 Aligned_cols=133 Identities=23% Similarity=0.311 Sum_probs=116.8
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+|+++.+..|..+++|++|+|++|+|++..|+.|.++++|++|+|++|+|+...+..|.++++|+.|+|++|+|
T Consensus 37 L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 116 (220)
T 2v9t_B 37 IRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI 116 (220)
T ss_dssp EECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCC
Confidence 78889999988888899999999999999999887788899999999999999999866666788899999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++..|..|..+++|+.|+|++|.|++..+..|..+++|+.|++++|++.|++.
T Consensus 117 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 117 NCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 98888889999999999999999998877888888999999999999887643
No 255
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.86 E-value=1e-21 Score=177.43 Aligned_cols=133 Identities=29% Similarity=0.314 Sum_probs=108.9
Q ss_pred eecCCCcccccCC-cCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIP-STFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
|+|++|+|+++.| ..|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 37 L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 116 (220)
T 2v70_A 37 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR 116 (220)
T ss_dssp EECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSC
T ss_pred EEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCc
Confidence 6788888887754 457888888888888888887777788888888888888888887777778888888888888888
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|++++|+++|+++
T Consensus 117 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 117 ITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 888778888888888888888888887778888888888888888888887654
No 256
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=7e-21 Score=173.04 Aligned_cols=132 Identities=23% Similarity=0.254 Sum_probs=106.9
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+|+++.|..|.++++|++|+|++|+|+...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 45 L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l 124 (229)
T 3e6j_A 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKL 124 (229)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcc
Confidence 67888888887788888888888888888888765556678888888888888888866667778888888888888888
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+ .+|..+..+++|+.|+|++|+|++.++..+..+++|+.|++++|++.|+++
T Consensus 125 ~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 125 T-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp C-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred c-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8 567778888888888888888887766778888888888888888887654
No 257
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.84 E-value=1.1e-21 Score=181.70 Aligned_cols=140 Identities=19% Similarity=0.238 Sum_probs=109.0
Q ss_pred cCccCCccCcccceeEEEEEe-cCCCe--EEEEEeeccccc------------------------chHHHHHHHHHHHcC
Q 041491 219 HFSEKSLIGIGSFGTVYKGRF-LDGME--VAIKVFHLQFDG------------------------ALKSFDAECEVLKSV 271 (467)
Q Consensus 219 ~y~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 271 (467)
-|++.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|+.+++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999998 57888 999997543111 013578899999999
Q ss_pred CCCC--ceeEEEEeecCCeeeEEEecccC-C----CHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCC
Q 041491 272 RHRN--LVKIISSCSNGNFEALVLEYMAN-G----SLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDI 344 (467)
Q Consensus 272 ~h~n--iv~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 344 (467)
.|++ ++..++. +..++||||+.+ | +|.+.... .++..+..++.|++.||.|||. +.||+||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCC
Confidence 8875 4455543 356899999942 3 67665432 2344677899999999999994 579999999
Q ss_pred CCCCeeecCCCcEEEeccccceecCC
Q 041491 345 KPSNVLLDDDMVAHLSDFGIAKLLNG 370 (467)
Q Consensus 345 kp~NIll~~~~~~kl~Dfg~a~~~~~ 370 (467)
||+|||+++ .++|+|||+|.....
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEETTS
T ss_pred CHHHEEEcC--cEEEEECcccccCCC
Confidence 999999998 999999999987643
No 258
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.84 E-value=2e-20 Score=172.65 Aligned_cols=135 Identities=26% Similarity=0.306 Sum_probs=123.0
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.|..|.++++|++|+|++|.|++..+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|+
T Consensus 39 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 118 (251)
T 3m19_A 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQ 118 (251)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCc
Confidence 37899999999888999999999999999999998888889999999999999999998878889999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
|++..+..|..+++|+.|+|++|+|++.++..+..+++|+.|++++|++++.++.
T Consensus 119 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 119 LKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 9987777789999999999999999988777899999999999999999876553
No 259
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=2.8e-20 Score=166.52 Aligned_cols=135 Identities=27% Similarity=0.275 Sum_probs=119.1
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 32 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 111 (208)
T 2o6s_A 32 YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQ 111 (208)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCc
Confidence 37899999998888889999999999999999987666778899999999999999997777778999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
+++..+..|..+++|+.|++++|.+++.++..+..+++|+.|++++|++.+.++.
T Consensus 112 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 112 LQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT
T ss_pred CcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCCC
Confidence 9987777789999999999999999987777788899999999999999887653
No 260
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.83 E-value=3.8e-20 Score=170.73 Aligned_cols=130 Identities=25% Similarity=0.310 Sum_probs=64.0
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+|
T Consensus 64 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 143 (251)
T 3m19_A 64 LNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL 143 (251)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcC
Confidence 44455555544444455555555555555555444444444555555555555555444444444455555555555555
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++..+..|..+++|+.|+|++|++++.++..+..+++|+.|++++|+++|
T Consensus 144 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 144 QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 54443344455555555555555554444444445555555555555544
No 261
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.83 E-value=2.4e-20 Score=164.62 Aligned_cols=131 Identities=27% Similarity=0.318 Sum_probs=119.7
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCc-CccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPL-DIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
+|++++|+++. +|..+.. +|++|+|++|.|++..+. .|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 12 ~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 37899999986 5665543 999999999999966654 4999999999999999999998999999999999999999
Q ss_pred cccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 80 ~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+|++..|..|..+++|+.|+|++|+|++.+|..+..+++|+.|++++|+++|+++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 9999888889999999999999999999999999999999999999999998765
No 262
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.83 E-value=5.3e-20 Score=171.85 Aligned_cols=131 Identities=32% Similarity=0.365 Sum_probs=91.7
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+++++ ..+.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++
T Consensus 68 L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 145 (272)
T 3rfs_A 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQL 145 (272)
T ss_dssp EECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCcc
Confidence 56777777753 3666777777777777777765566667777777777777777766666677777777777777777
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++..+..|..+++|+.|++++|++++.++..+..+++|+.|++++|++++.++
T Consensus 146 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 146 QSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 76666666777777777777777776666666777777777777777766444
No 263
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.81 E-value=8.8e-20 Score=161.06 Aligned_cols=129 Identities=26% Similarity=0.317 Sum_probs=118.6
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
+++++|+++. +|..+. ++|++|+|++|.|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 15 l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 6899999996 455553 68999999999998 7889999999999999999999988888999999999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++..|..|..+++|+.|+|++|.|++.++..|..+++|+.|++++|++.|++.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 99888899999999999999999998877889999999999999999998654
No 264
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.80 E-value=3e-19 Score=166.53 Aligned_cols=134 Identities=31% Similarity=0.326 Sum_probs=120.8
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
+|+|++|+|+.+.+..|.++++|++|+|++|.+++..+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|+
T Consensus 65 ~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 65 LLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp EEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCc
Confidence 37899999998888888999999999999999997777788999999999999999998888889999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+++..+..|..+++|+.|+|++|.+++.++..|..+++|+.|++++|++++..+
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPE 198 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCH
Confidence 998777778999999999999999998877889999999999999999986544
No 265
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.80 E-value=5.8e-20 Score=196.41 Aligned_cols=91 Identities=40% Similarity=0.679 Sum_probs=54.2
Q ss_pred CCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCccccCCCCCCEEEccCCccCCccccccccccccccccc
Q 041491 45 KVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNL 124 (467)
Q Consensus 45 ~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 124 (467)
++|+.|+|++|+++|.+|..|+++++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..+..+++|+.|++
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEEC
Confidence 44555555555555555555556666666666666666566666666666666666666666666666666666666666
Q ss_pred ccccccCCCCC
Q 041491 125 SFNRLKGDIPT 135 (467)
Q Consensus 125 ~~N~l~~~~~~ 135 (467)
++|+++|.+|.
T Consensus 712 s~N~l~g~iP~ 722 (768)
T 3rgz_A 712 SNNNLSGPIPE 722 (768)
T ss_dssp CSSEEEEECCS
T ss_pred cCCcccccCCC
Confidence 66666655554
No 266
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.79 E-value=6.6e-19 Score=153.28 Aligned_cols=130 Identities=26% Similarity=0.328 Sum_probs=117.0
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
+++++|+++.+ |..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+|
T Consensus 12 l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 12 IRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp EECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 68899999975 5444 37999999999999977777889999999999999999977777889999999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++..+..|..+++|+.|++++|.+++.++..+..+++|+.|++++|++.|+++
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 89 QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 98877789999999999999999998877778999999999999999998765
No 267
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.79 E-value=2.5e-19 Score=168.49 Aligned_cols=134 Identities=28% Similarity=0.291 Sum_probs=119.4
Q ss_pred CeecCCCc-ccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNE-LSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
+|+|++|+ ++.+.|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 84 ~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 163 (285)
T 1ozn_A 84 QLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163 (285)
T ss_dssp EEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCC
Confidence 37899997 88877899999999999999999999877888999999999999999999777777999999999999999
Q ss_pred cccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 80 ~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++++..+..|..+++|+.|++++|.+++..|..+..+++|+.|++++|++++.++
T Consensus 164 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 218 (285)
T 1ozn_A 164 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPT 218 (285)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCH
T ss_pred cccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCH
Confidence 9997766779999999999999999998888999999999999999999987443
No 268
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.79 E-value=2.5e-19 Score=179.94 Aligned_cols=134 Identities=22% Similarity=0.299 Sum_probs=127.4
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|++|+|++|++
T Consensus 280 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 359 (455)
T 3v47_A 280 CDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHI 359 (455)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCC
T ss_pred EEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcc
Confidence 78999999999999999999999999999999988899999999999999999999988889999999999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
++..|..|..+++|+.|+|++|++++.++..+..+++|+.|++++|+++|++|.
T Consensus 360 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 360 RALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 988899999999999999999999988788889999999999999999998874
No 269
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.79 E-value=1.1e-18 Score=162.76 Aligned_cols=135 Identities=29% Similarity=0.304 Sum_probs=124.2
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.+..|.++++|++|+|++|.++...+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 41 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 120 (270)
T 2o6q_A 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQ 120 (270)
T ss_dssp EEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSC
T ss_pred EEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCc
Confidence 37999999999888899999999999999999997666778999999999999999997777889999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
+++..|..|..+++|+.|+|++|.+++.++..+..+++|+.|++++|.+++..+.
T Consensus 121 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 121 LKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChh
Confidence 9988888899999999999999999988778899999999999999999875553
No 270
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.78 E-value=6.9e-20 Score=174.66 Aligned_cols=135 Identities=28% Similarity=0.468 Sum_probs=126.1
Q ss_pred eecCCCcccc--cCCcCccCCCCccEEEcCC-CcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccC
Q 041491 2 LSLGSNELSS--VIPSTFWNLNSILSFDFSS-NSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLEN 78 (467)
Q Consensus 2 L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~ 78 (467)
|+|++|++++ ..|..|.++++|++|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++
T Consensus 55 L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 134 (313)
T 1ogq_A 55 LDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSY 134 (313)
T ss_dssp EEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCS
T ss_pred EECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCC
Confidence 7899999998 8899999999999999995 999999999999999999999999999989999999999999999999
Q ss_pred CcccCCCCccccCCCCCCEEEccCCccCCcccccccccc-cccccccccccccCCCCCC
Q 041491 79 NRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLV-YLKDLNLSFNRLKGDIPTR 136 (467)
Q Consensus 79 N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~l~l~~N~l~~~~~~~ 136 (467)
|++++.+|..+..+++|+.|+|++|.+++.+|..+..++ +|+.|++++|.+++.+|..
T Consensus 135 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~ 193 (313)
T 1ogq_A 135 NALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193 (313)
T ss_dssp SEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGG
T ss_pred CccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChH
Confidence 999999999999999999999999999988999999998 9999999999998766643
No 271
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.78 E-value=3e-19 Score=186.73 Aligned_cols=135 Identities=21% Similarity=0.275 Sum_probs=124.8
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|||++|+|+++.|..|.++++|++|||++|+|++..|++|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 56 ~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~ 135 (635)
T 4g8a_A 56 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETN 135 (635)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSC
T ss_pred EEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCc
Confidence 48999999999999999999999999999999998888899999999999999999997777889999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCc-ccccccccccccccccccccccCCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGV-IPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
|++..+..|+++++|+.|+|++|.+++. .|..+..+++|+.|++++|++++..+.
T Consensus 136 l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 136 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 9988778899999999999999999864 578889999999999999999876543
No 272
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=6.1e-19 Score=171.61 Aligned_cols=130 Identities=28% Similarity=0.217 Sum_probs=105.3
Q ss_pred eecCCCcccccCCcCcc-CCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIPSTFW-NLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
|+|++|+|+++.+..|. ++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 44 L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 123 (361)
T 2xot_A 44 LDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNH 123 (361)
T ss_dssp EECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCc
Confidence 68888888887777787 88888888888888887777778888888888888888887767778888888888888888
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccc---cccccccccccccccccC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISL---EKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~---~~l~~L~~l~l~~N~l~~ 131 (467)
|++..|..|..+++|+.|+|++|+|++.++..+ ..+++|+.|+|++|+|+.
T Consensus 124 i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 124 IVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred ccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 887777888888888888888888886655555 567888888888888875
No 273
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.78 E-value=1e-19 Score=173.45 Aligned_cols=133 Identities=32% Similarity=0.590 Sum_probs=106.0
Q ss_pred eecCC-CcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGS-NELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
|+|++ |++++..|..|.++++|++|+|++|.+++.+|..|.++++|++|+|++|++++.+|..+..+++|++|+|++|+
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 67774 88887778888888888888888888877788888888888888888888887788888888888888888888
Q ss_pred ccCCCCccccCCC-CCCEEEccCCccCCcccccccccccccccccccccccCCCCC
Q 041491 81 LQGPIPESFGELT-SLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 81 l~~~~p~~~~~~~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
+++.+|..+..++ +|+.|++++|.+++.+|..+..+. |+.|++++|.+++.+|.
T Consensus 161 l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~ 215 (313)
T 1ogq_A 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASV 215 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGG
T ss_pred ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCH
Confidence 8877788888777 788888888888877777777776 78888888877765543
No 274
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.4e-18 Score=156.78 Aligned_cols=131 Identities=24% Similarity=0.265 Sum_probs=119.9
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
+++++|+++. +|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..|..|.++++|++|+|++|+|
T Consensus 16 v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 6789999997 465554 7999999999999987778999999999999999999988899999999999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
++..+..|..+++|+.|+|++|.|++..|..|..+++|+.|+|++|+|++..+.
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 987777789999999999999999999999999999999999999999976554
No 275
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.78 E-value=1.6e-18 Score=163.22 Aligned_cols=128 Identities=31% Similarity=0.314 Sum_probs=113.2
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+|+++.+. ..+++|++|+|++|+|+ .+|..+.++++|++|+|++|++++..|..|.++++|+.|+|++|+
T Consensus 59 ~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 59 QLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 378999999986553 78899999999999998 688888999999999999999997777889999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
|++..+..|..+++|+.|+|++|+|++.++..+..+++|+.|++++|+++.
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 186 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT 186 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc
Confidence 998777788899999999999999997777778889999999999999984
No 276
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.77 E-value=1.9e-18 Score=161.35 Aligned_cols=133 Identities=27% Similarity=0.269 Sum_probs=74.9
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+++++.+..|.++++|++|+|++|++++..+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|++
T Consensus 90 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 169 (272)
T 3rfs_A 90 LILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCc
Confidence 45555555555555555555555555555555544444455555555555555555544444455555555555555555
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++..+..|..+++|+.|++++|.+++.+|..+..+++|+.|++++|++.|.+|
T Consensus 170 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 170 QSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 55444455555555555555555555555555555555555555555555443
No 277
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.77 E-value=2.1e-18 Score=162.17 Aligned_cols=133 Identities=26% Similarity=0.267 Sum_probs=109.1
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCc-CCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNY-LTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~-l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
|+|++|+++++.+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+ ++...|..|..+++|++|+|++|+
T Consensus 37 L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~ 116 (285)
T 1ozn_A 37 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG 116 (285)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCc
Confidence 6788888888777888888888888888888887778888888888888888887 776667788888888888888888
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+++..|..|..+++|+.|++++|.+++.++..+..+++|+.|++++|.+++..+
T Consensus 117 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 117 LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 887777788888888888888888887766778888888888888888875443
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.77 E-value=1e-18 Score=166.06 Aligned_cols=136 Identities=21% Similarity=0.314 Sum_probs=120.7
Q ss_pred CeecCCCcccccCC-cCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCC-CCCCCcCCCCCCCEEeccC
Q 041491 1 NLSLGSNELSSVIP-STFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTG-DIPPTIGGLTNLQLLSLEN 78 (467)
Q Consensus 1 ~L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~-~~~~~~~~l~~L~~l~l~~ 78 (467)
.|+|++|+++++.+ ..|.++++|++|+|++|.+.+..+..|.++++|++|+|++|.+++ .+|..+..+++|+.|+|++
T Consensus 105 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 184 (306)
T 2z66_A 105 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 184 (306)
T ss_dssp EEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCC
Confidence 37899999998765 689999999999999999998888889999999999999999986 5788899999999999999
Q ss_pred CcccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCCC
Q 041491 79 NRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPTR 136 (467)
Q Consensus 79 N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 136 (467)
|++++..|..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|++++..+..
T Consensus 185 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 242 (306)
T 2z66_A 185 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE 242 (306)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSS
T ss_pred CCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHH
Confidence 9999888888999999999999999999887778889999999999999998876643
No 279
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.77 E-value=6e-20 Score=176.58 Aligned_cols=139 Identities=16% Similarity=0.181 Sum_probs=103.4
Q ss_pred ccCccCCccCcccceeEEEEEecCCCeEEEEEeeccccc--------------chHH--------HHHHHHHHHcCCCCC
Q 041491 218 DHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDG--------------ALKS--------FDAECEVLKSVRHRN 275 (467)
Q Consensus 218 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~--------~~~E~~~l~~l~h~n 275 (467)
.-|++.+.||+|++|.||+|...+|+.||||+++..... .... ..+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 349999999999999999999988999999998642100 0011 234666666664443
Q ss_pred c--eeEEEEeecCCeeeEEEecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecC
Q 041491 276 L--VKIISSCSNGNFEALVLEYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDD 353 (467)
Q Consensus 276 i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~ 353 (467)
+ .+.++. ...+|||||++|++|.++... .....++.|++.+|.+|| +.|||||||||.|||+++
T Consensus 175 v~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEE
T ss_pred CCCCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeC
Confidence 3 233332 123799999999998765421 234568899999999999 999999999999999987
Q ss_pred CC----------cEEEeccccceecCC
Q 041491 354 DM----------VAHLSDFGIAKLLNG 370 (467)
Q Consensus 354 ~~----------~~kl~Dfg~a~~~~~ 370 (467)
++ .+.|+||+-+.....
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred CCCcccccccccceEEEEeCCcccCCC
Confidence 76 389999998876553
No 280
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=7.3e-19 Score=171.02 Aligned_cols=134 Identities=25% Similarity=0.238 Sum_probs=120.7
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 68 ~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 147 (361)
T 2xot_A 68 SLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQ 147 (361)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCc
Confidence 37999999999999999999999999999999998777889999999999999999998889999999999999999999
Q ss_pred ccCCCCccc---cCCCCCCEEEccCCccCCccccccccccc--ccccccccccccCCCC
Q 041491 81 LQGPIPESF---GELTSLESLDLSVNNLSGVIPISLEKLVY--LKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~---~~~~~L~~L~l~~N~l~~~~~~~~~~l~~--L~~l~l~~N~l~~~~~ 134 (467)
|++..+..| ..+++|+.|+|++|+|++.++..+..++. ++.|+|++|++.|++.
T Consensus 148 l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 148 ISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 997555555 67999999999999999887788888887 4899999999998753
No 281
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.76 E-value=1.9e-18 Score=161.56 Aligned_cols=133 Identities=21% Similarity=0.281 Sum_probs=120.5
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|++++|+
T Consensus 32 ~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 111 (276)
T 2z62_A 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETN 111 (276)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCC
Confidence 37899999999888899999999999999999997777889999999999999999998888899999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCc-ccccccccccccccccccccccCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGV-IPISLEKLVYLKDLNLSFNRLKGDI 133 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~~ 133 (467)
+++..+..+..+++|+.|++++|.+++. +|..+..+++|+.|++++|++++..
T Consensus 112 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~ 165 (276)
T 2z62_A 112 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (276)
T ss_dssp CCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred ccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCC
Confidence 9987777899999999999999999874 5889999999999999999988643
No 282
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=4.4e-18 Score=153.48 Aligned_cols=133 Identities=21% Similarity=0.214 Sum_probs=119.6
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCC-cCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLP-LDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
.+++++|+++. +|..+. ..+++|+|++|+|++..| ..|..+++|+.|+|++|++++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 37899999997 466553 467899999999997655 46899999999999999999888889999999999999999
Q ss_pred cccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCCC
Q 041491 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPTR 136 (467)
Q Consensus 80 ~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 136 (467)
+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..|..
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 148 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGA 148 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTT
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHH
Confidence 999988888999999999999999999998999999999999999999999866643
No 283
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.76 E-value=4.5e-18 Score=160.15 Aligned_cols=131 Identities=24% Similarity=0.217 Sum_probs=119.7
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+|+++.|..|.++++|++|+|++|.|++..+ ...+++|+.|+|++|+++ .+|..+.++++|+.|+|++|+
T Consensus 35 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~ 111 (290)
T 1p9a_G 35 ILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNR 111 (290)
T ss_dssp EEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSC
T ss_pred EEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCc
Confidence 37999999999989999999999999999999985433 378999999999999998 788899999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
|++..|..|..+++|+.|+|++|+|++.++..|..+++|+.|++++|+|+..++
T Consensus 112 l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 165 (290)
T 1p9a_G 112 LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPA 165 (290)
T ss_dssp CCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCT
T ss_pred CcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCH
Confidence 998888899999999999999999998888889999999999999999986544
No 284
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.76 E-value=1.2e-18 Score=186.25 Aligned_cols=134 Identities=34% Similarity=0.516 Sum_probs=91.8
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|++++..|..|.++++|++|+|++|.+++.+|..|..+++|+.|+|++|++++.+|..+..+++|++|+|++|++
T Consensus 399 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp EECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 56667777766677777777777777777777666666666666777777777766666666666666666666666666
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|++++.+|.
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 532 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCH
Confidence 666666666666666666666666666666666666666666666666665553
No 285
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.76 E-value=1.1e-18 Score=150.46 Aligned_cols=129 Identities=19% Similarity=0.184 Sum_probs=111.0
Q ss_pred CeecCCCccc-ccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNELS-SVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
.|+|++|+++ +.+|..|..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+..+++|+.|+|++|
T Consensus 28 ~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 105 (168)
T 2ell_A 28 ELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGN 105 (168)
T ss_dssp EEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSS
T ss_pred EEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCC
Confidence 3789999998 56788889999999999999999865 78899999999999999999778888888999999999999
Q ss_pred cccCCCC-ccccCCCCCCEEEccCCccCCccc---ccccccccccccccccccccC
Q 041491 80 RLQGPIP-ESFGELTSLESLDLSVNNLSGVIP---ISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 80 ~l~~~~p-~~~~~~~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++++..+ ..+..+++|+.|++++|.+++.++ ..+..+++|+.|++++|.+..
T Consensus 106 ~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 106 KLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp SCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9986422 688899999999999999997655 478889999999999998764
No 286
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=8.8e-18 Score=152.50 Aligned_cols=129 Identities=24% Similarity=0.272 Sum_probs=116.6
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
+++++++++. +|..+. ++|++|+|++|.|++..|..|.++++|+.|+|++|+++...+..|.++++|+.|+|++|+|
T Consensus 24 v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l 100 (229)
T 3e6j_A 24 VDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQL 100 (229)
T ss_dssp EECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred eEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcC
Confidence 6788999996 455553 8999999999999988899999999999999999999877677889999999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+|++..+
T Consensus 101 ~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 101 TVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred CccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCH
Confidence 9887788999999999999999999 668888999999999999999986544
No 287
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.75 E-value=1.5e-18 Score=166.54 Aligned_cols=133 Identities=23% Similarity=0.282 Sum_probs=102.4
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccC---------CCCccEEEccCCcCCCCCCCCcCCCCCC
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIEN---------MKVVVEINLSRNYLTGDIPPTIGGLTNL 71 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~---------l~~L~~l~l~~n~l~~~~~~~~~~l~~L 71 (467)
+|+|++|+++ .+|..|.++++|++|+|++|.+.+.+|..+.. +++|++|+|++|+++ .+|..++.+++|
T Consensus 131 ~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L 208 (328)
T 4fcg_A 131 TLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNL 208 (328)
T ss_dssp EEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTC
T ss_pred EEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCC
Confidence 3678888888 46777888888888888887777777776554 788888888888887 677777778888
Q ss_pred CEEeccCCcccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCCC
Q 041491 72 QLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPTR 136 (467)
Q Consensus 72 ~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 136 (467)
++|+|++|++++ +|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|++++|++.+.+|..
T Consensus 209 ~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~ 272 (328)
T 4fcg_A 209 KSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLD 272 (328)
T ss_dssp CEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTT
T ss_pred CEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchh
Confidence 888888888875 5556777788888888887777777777777778888888887777766643
No 288
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.75 E-value=6.1e-18 Score=151.20 Aligned_cols=131 Identities=25% Similarity=0.253 Sum_probs=118.7
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.+..|..+++|++|+|++|++++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 56 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 135 (208)
T 2o6s_A 56 QLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQ 135 (208)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCc
Confidence 37999999999888889999999999999999997777778999999999999999998777789999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPTRSP 138 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~ 138 (467)
+++..+..|..+++|+.|++++|.+.+ .+++|+.|+++.|+++|.+|....
T Consensus 136 l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 136 LKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTS
T ss_pred cceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCc
Confidence 998777779999999999999998875 356899999999999999987644
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.74 E-value=4.1e-18 Score=161.85 Aligned_cols=133 Identities=25% Similarity=0.355 Sum_probs=113.5
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCC-cCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLP-LDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
.|+|++|++++ .|..|..+++|++|+|++|.+++..+ ..+..+++|+.|+|++|++++..|..+.++++|++|+|++|
T Consensus 82 ~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 82 YLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp EEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTC
T ss_pred EEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCC
Confidence 37889999986 56668889999999999999986554 57888999999999999998888888889999999999999
Q ss_pred cccC-CCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 80 RLQG-PIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 80 ~l~~-~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++++ ..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..+
T Consensus 161 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 216 (306)
T 2z66_A 161 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 216 (306)
T ss_dssp EEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS
T ss_pred ccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh
Confidence 9886 578888899999999999999988878888889999999999999886544
No 290
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.74 E-value=1.5e-18 Score=146.46 Aligned_cols=122 Identities=18% Similarity=0.203 Sum_probs=73.5
Q ss_pred eecCCCccc-ccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGSNELS-SVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
|+|++|+++ +..|..+..+++|++|+|++|.+++. ..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|+
T Consensus 22 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~ 99 (149)
T 2je0_A 22 LVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNK 99 (149)
T ss_dssp EECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSC
T ss_pred EEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCc
Confidence 556666666 44555666666666666666666543 456666666666666666665455555556666666666666
Q ss_pred ccCC-CCccccCCCCCCEEEccCCccCCccc---ccccccccccccccc
Q 041491 81 LQGP-IPESFGELTSLESLDLSVNNLSGVIP---ISLEKLVYLKDLNLS 125 (467)
Q Consensus 81 l~~~-~p~~~~~~~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~l~l~ 125 (467)
+++. .|..+..+++|+.|++++|.+++.++ ..+..+++|+.|+++
T Consensus 100 i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 100 IKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6642 22556666666666666666665444 355666666666654
No 291
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.74 E-value=7.8e-18 Score=175.35 Aligned_cols=135 Identities=21% Similarity=0.287 Sum_probs=125.7
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 36 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~ 115 (606)
T 3vq2_A 36 NIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETK 115 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSC
T ss_pred EEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCc
Confidence 37999999999999999999999999999999998889999999999999999999998889999999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCC-cccccccccccccccccccccccCCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSG-VIPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
+++..|..++++++|+.|++++|.+++ .+|..+.++++|+.|++++|.+++..+.
T Consensus 116 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 116 LASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred cccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 998877899999999999999999986 4699999999999999999999876554
No 292
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.73 E-value=7.1e-18 Score=176.31 Aligned_cols=133 Identities=23% Similarity=0.280 Sum_probs=121.9
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcc-cCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSL-NGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l-~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
+++++|++++..|..+..+++|+.|+|++|.+ .+..|+.|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 450 l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~ 529 (635)
T 4g8a_A 450 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 529 (635)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred ccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCc
Confidence 67889999998899999999999999999984 45678899999999999999999998889999999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCccccccccc-ccccccccccccccCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKL-VYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~ 134 (467)
|++..|..|..+++|+.|+|++|+|++.+|..+..+ ++|+.|++++|++.|++.
T Consensus 530 l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 530 FFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 998888899999999999999999999999999888 589999999999999865
No 293
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=7.6e-18 Score=148.54 Aligned_cols=134 Identities=25% Similarity=0.358 Sum_probs=113.2
Q ss_pred CeecCCCcccccCCc-CccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNELSSVIPS-TFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
.|+|++|+|+++.+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 33 ~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 112 (192)
T 1w8a_A 33 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN 112 (192)
T ss_dssp EEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSS
T ss_pred EEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC
Confidence 379999999988775 5999999999999999999888999999999999999999999888888999999999999999
Q ss_pred cccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCC
Q 041491 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 80 ~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
+|++..|..|..+++|+.|+|++|.+++..+.... ...++...+.++...|..|.
T Consensus 113 ~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~-~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 113 QISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF-AEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH-HHHHHHHCCSGGGCBBCSST
T ss_pred cCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHH-HHHHHHcCCCCCCCCCCCCh
Confidence 99999999999999999999999999977652210 11233444555655554444
No 294
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.73 E-value=1e-17 Score=156.65 Aligned_cols=134 Identities=24% Similarity=0.320 Sum_probs=122.1
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.+..|.++++|++|+|++|.+++..+..|.++++|+.|++++|++++..+..+..+++|++|+|++|+
T Consensus 56 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 135 (276)
T 2z62_A 56 VLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 135 (276)
T ss_dssp EEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCc
Confidence 37999999999988999999999999999999998888899999999999999999998777789999999999999999
Q ss_pred ccCC-CCccccCCCCCCEEEccCCccCCccccccccccccc----ccccccccccCCCC
Q 041491 81 LQGP-IPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLK----DLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~-~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~----~l~l~~N~l~~~~~ 134 (467)
+++. +|..+..+++|+.|++++|++++..+..+..+.+|+ .|++++|.+++..+
T Consensus 136 l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~ 194 (276)
T 2z62_A 136 IQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQP 194 (276)
T ss_dssp CCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECT
T ss_pred cceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCc
Confidence 9874 589999999999999999999988888888888887 78899999886544
No 295
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.73 E-value=8.5e-18 Score=169.86 Aligned_cols=133 Identities=22% Similarity=0.256 Sum_probs=120.5
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+|+++.|..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|+
T Consensus 36 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 115 (477)
T 2id5_A 36 LLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK 115 (477)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSC
T ss_pred EEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCc
Confidence 37899999999889999999999999999999998889999999999999999999997666778999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDI 133 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 133 (467)
+++..|..|..+++|+.|++++|.+++..|..|..+++|+.|++++|.+++..
T Consensus 116 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 116 IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp CCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred cccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 99888889999999999999999999888888999999999999999887643
No 296
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.72 E-value=5.9e-18 Score=154.74 Aligned_cols=131 Identities=21% Similarity=0.253 Sum_probs=118.9
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCc-ccCCCCcCccCCCCccEEEccC-CcCCCCCCCCcCCCCCCCEEeccC
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNS-LNGSLPLDIENMKVVVEINLSR-NYLTGDIPPTIGGLTNLQLLSLEN 78 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~l~l~~-n~l~~~~~~~~~~l~~L~~l~l~~ 78 (467)
.|+|++|+|+++.+..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|+.|++++
T Consensus 35 ~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~ 114 (239)
T 2xwt_C 35 TLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFN 114 (239)
T ss_dssp EEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEE
T ss_pred EEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCC
Confidence 37899999999888899999999999999997 9876777899999999999999 999977778899999999999999
Q ss_pred CcccCCCCccccCCCCCC---EEEccCC-ccCCccccccccccccc-ccccccccccCCCC
Q 041491 79 NRLQGPIPESFGELTSLE---SLDLSVN-NLSGVIPISLEKLVYLK-DLNLSFNRLKGDIP 134 (467)
Q Consensus 79 N~l~~~~p~~~~~~~~L~---~L~l~~N-~l~~~~~~~~~~l~~L~-~l~l~~N~l~~~~~ 134 (467)
|++++ +|. |..+++|+ .|++++| .+++.++..|..+++|+ .|++++|+++ .+|
T Consensus 115 n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~ 172 (239)
T 2xwt_C 115 TGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQ 172 (239)
T ss_dssp ECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EEC
T ss_pred CCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccC
Confidence 99996 666 88999998 9999999 99988778899999999 9999999998 444
No 297
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.72 E-value=1.5e-17 Score=166.92 Aligned_cols=136 Identities=23% Similarity=0.332 Sum_probs=123.5
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCC-CcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSL-PLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
.|+|++|+|+++.|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 34 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 113 (455)
T 3v47_A 34 YVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQC 113 (455)
T ss_dssp EEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTS
T ss_pred EEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCC
Confidence 3899999999999999999999999999999997555 678999999999999999999888999999999999999999
Q ss_pred cccCCCCcc--ccCCCCCCEEEccCCccCCccccc-ccccccccccccccccccCCCCCC
Q 041491 80 RLQGPIPES--FGELTSLESLDLSVNNLSGVIPIS-LEKLVYLKDLNLSFNRLKGDIPTR 136 (467)
Q Consensus 80 ~l~~~~p~~--~~~~~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~l~l~~N~l~~~~~~~ 136 (467)
++++..|.. |..+++|+.|+|++|.+++..|.. +..+++|+.|++++|.+++..+..
T Consensus 114 ~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 173 (455)
T 3v47_A 114 NLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEED 173 (455)
T ss_dssp CCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTT
T ss_pred CCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhh
Confidence 999855554 999999999999999999887876 899999999999999998876653
No 298
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.71 E-value=1.9e-17 Score=158.74 Aligned_cols=135 Identities=21% Similarity=0.299 Sum_probs=124.7
Q ss_pred CeecCCCcccccCCcCccC---------CCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCC
Q 041491 1 NLSLGSNELSSVIPSTFWN---------LNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNL 71 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~---------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L 71 (467)
.|+|++|++.+..|..+.. +++|++|+|++|+++ .+|..+.++++|++|+|++|+++ .+|..+..+++|
T Consensus 154 ~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L 231 (328)
T 4fcg_A 154 ELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKL 231 (328)
T ss_dssp EEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTC
T ss_pred EEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCC
Confidence 3789999988888988765 999999999999998 78989999999999999999999 467789999999
Q ss_pred CEEeccCCcccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCCCCC
Q 041491 72 QLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIPTRS 137 (467)
Q Consensus 72 ~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~ 137 (467)
++|+|++|++.+.+|..++.+++|+.|+|++|++.+.+|..+..+++|+.|++++|++.+.+|...
T Consensus 232 ~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l 297 (328)
T 4fcg_A 232 EELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLI 297 (328)
T ss_dssp CEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGG
T ss_pred CEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHH
Confidence 999999999999999999999999999999999999999999999999999999999999888653
No 299
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.71 E-value=1.6e-17 Score=173.03 Aligned_cols=130 Identities=24% Similarity=0.298 Sum_probs=104.0
Q ss_pred eecCCCcccccCC-cCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCC-CCCCCcCCCCCCCEEeccCC
Q 041491 2 LSLGSNELSSVIP-STFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTG-DIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 2 L~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~-~~~~~~~~l~~L~~l~l~~N 79 (467)
|+|++|++++..| ..|.++++|++|++++|.+.+..|..|.++++|+.|+|++|++++ .+|..+..+++|+.|+|++|
T Consensus 404 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 483 (606)
T 3vq2_A 404 LDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKC 483 (606)
T ss_dssp EECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred eECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCC
Confidence 6788888887766 677888888888888888887777778888888888888888876 36777888888888888888
Q ss_pred cccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 80 ~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++++..|..|..+++|+.|++++|++++.+|..+..+++|+.|++++|+++.
T Consensus 484 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 484 QLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred cCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 8887777778888888888888888887777888888888888888888773
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.71 E-value=2.2e-17 Score=165.64 Aligned_cols=132 Identities=25% Similarity=0.270 Sum_probs=116.9
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+|+++.|..|.++++|+.|+|++|.|++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 79 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 158 (452)
T 3zyi_A 79 YLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNP 158 (452)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCC
T ss_pred EEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCC
Confidence 37899999999999999999999999999999998888999999999999999999997777789999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccC-CccCCcccccccccccccccccccccccCC
Q 041491 81 LQGPIPESFGELTSLESLDLSV-NNLSGVIPISLEKLVYLKDLNLSFNRLKGD 132 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 132 (467)
+++..+..|..+++|+.|++++ |.+....+..|..+++|+.|++++|.+++.
T Consensus 159 l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 159 IESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp CCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred cceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 9977777899999999999998 555555456788899999999999998753
No 301
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.71 E-value=2.9e-17 Score=164.15 Aligned_cols=131 Identities=24% Similarity=0.281 Sum_probs=91.1
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCC-CcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSS-NSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
|+|++|+|+.+.+..|.++++|+.|+|++ |.+....+..|.++++|+.|+|++|+++ .+| .+..+++|+.|+|++|+
T Consensus 141 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~ 218 (440)
T 3zyj_A 141 LWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNH 218 (440)
T ss_dssp EECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSC
T ss_pred eeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCc
Confidence 67888888887777777778888888877 3454334446777777777777777776 444 36667777777777777
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+
T Consensus 219 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 272 (440)
T 3zyj_A 219 LSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPH 272 (440)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCT
T ss_pred cCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccCh
Confidence 776666677777777777777777776666666677777777777777665433
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.71 E-value=1.6e-17 Score=161.12 Aligned_cols=134 Identities=20% Similarity=0.277 Sum_probs=107.2
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+++++.+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++
T Consensus 57 L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 136 (353)
T 2z80_A 57 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPY 136 (353)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCC
T ss_pred EECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCC
Confidence 78888888887777888888888888888888877777888888888888888888855445588888888888888888
Q ss_pred cCCCC-ccccCCCCCCEEEccCC-ccCCcccccccccccccccccccccccCCCCC
Q 041491 82 QGPIP-ESFGELTSLESLDLSVN-NLSGVIPISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 82 ~~~~p-~~~~~~~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
++..+ ..+..+++|+.|++++| .+.+..+..+..+++|+.|++++|.+++..|.
T Consensus 137 ~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 192 (353)
T 2z80_A 137 KTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPK 192 (353)
T ss_dssp SSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred cccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHH
Confidence 85444 47888888888888888 46666677888888888888888888765443
No 303
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.71 E-value=2e-17 Score=172.18 Aligned_cols=134 Identities=18% Similarity=0.087 Sum_probs=119.8
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+|+++.|..|.++++|++|+|++|++.+..|+.|.++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 37 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 116 (606)
T 3t6q_A 37 CLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTG 116 (606)
T ss_dssp EEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSC
T ss_pred EEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccC
Confidence 37999999999989999999999999999999998889999999999999999999998889999999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+
T Consensus 117 i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 117 ISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp CSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECH
T ss_pred cccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccCh
Confidence 998778889999999999999999997554555568999999999999886543
No 304
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.70 E-value=2.2e-17 Score=170.60 Aligned_cols=130 Identities=25% Similarity=0.385 Sum_probs=63.3
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCC-cCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLP-LDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
|+|++|+++++.+. |..+++|++|+|++|.+.+..| ..|.++++|+.|+|++|++++..|..+.++++|+.|+|++|+
T Consensus 378 L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 456 (570)
T 2z63_A 378 LDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 456 (570)
T ss_dssp EECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCE
T ss_pred EECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCc
Confidence 44555555543333 4455555555555555544333 234445555555555555544444445555555555555555
Q ss_pred cc-CCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCC
Q 041491 81 LQ-GPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGD 132 (467)
Q Consensus 81 l~-~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 132 (467)
++ +.+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.
T Consensus 457 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 509 (570)
T 2z63_A 457 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509 (570)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCC
Confidence 44 33444445555555555555555544444444455555555555554443
No 305
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.70 E-value=6.5e-17 Score=139.55 Aligned_cols=107 Identities=29% Similarity=0.298 Sum_probs=61.0
Q ss_pred cEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCccccCCCCCCEEEccCC
Q 041491 24 LSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVN 103 (467)
Q Consensus 24 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N 103 (467)
+.+++++|.|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 45566666655 3444332 55556666666665555555556666666666666665554445555666666666666
Q ss_pred ccCCcccccccccccccccccccccccCCC
Q 041491 104 NLSGVIPISLEKLVYLKDLNLSFNRLKGDI 133 (467)
Q Consensus 104 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 133 (467)
+|++.++..|..+++|+.|+|++|+++|++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 665554555555566666666666655543
No 306
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.70 E-value=4e-17 Score=168.63 Aligned_cols=134 Identities=21% Similarity=0.271 Sum_probs=122.7
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.+..|.++++|++|+|++|++++..|+.|.++++|++|+|++|++++..|..|.++++|++|++++|+
T Consensus 32 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 111 (570)
T 2z63_A 32 NLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETN 111 (570)
T ss_dssp EEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccc
Confidence 37999999999989999999999999999999998778899999999999999999998888999999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCc-ccccccccccccccccccccccCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGV-IPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+++..+..++.+++|+.|++++|.+++. +|..+.++++|+.|++++|++++..+
T Consensus 112 l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 112 LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp CCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred cccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecH
Confidence 9977666799999999999999999873 68999999999999999999986544
No 307
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.70 E-value=3.6e-17 Score=169.85 Aligned_cols=132 Identities=17% Similarity=0.189 Sum_probs=116.1
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|++++|.++.+++..|.++++|++|+|++|.|++..|..|.++++|+.|+|++|.+++..|..|+++++|++|+|++|.|
T Consensus 56 l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 135 (597)
T 3oja_B 56 VTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL 135 (597)
T ss_dssp EEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCC
Confidence 67888899888777888899999999999999887778899999999999999999988888889999999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDI 133 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 133 (467)
++..+..|+.+++|+.|+|++|.+++.+|..|..+++|+.|++++|.+++..
T Consensus 136 ~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 187 (597)
T 3oja_B 136 SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD 187 (597)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred CCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC
Confidence 9766666789999999999999999888888999999999999999988643
No 308
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.70 E-value=3.3e-17 Score=172.98 Aligned_cols=134 Identities=27% Similarity=0.253 Sum_probs=118.0
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.+..|.++++|++|+|++|.+++..|+.|.++++|++|+|++|++++..+..|+++++|++|+|++|+
T Consensus 29 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~ 108 (680)
T 1ziw_A 29 VLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNS 108 (680)
T ss_dssp EEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSC
T ss_pred EEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCc
Confidence 37899999998888889999999999999999998888889999999999999999986666679999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+++..|..|+.+++|+.|++++|.+++.+|..+.++++|+.|++++|.+++..+
T Consensus 109 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 109 IQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp CCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred cCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 988777889999999999999999998888888889999999999998876544
No 309
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=2.5e-17 Score=145.88 Aligned_cols=125 Identities=22% Similarity=0.326 Sum_probs=109.5
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++. +| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|++++..|..++.+++|++|+|++|+
T Consensus 48 ~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~ 123 (197)
T 4ezg_A 48 YITLANINVTD-LT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSA 123 (197)
T ss_dssp EEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSB
T ss_pred EEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCc
Confidence 37899999995 45 6889999999999999775 33478999999999999999997788899999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCc-cCCcccccccccccccccccccccccC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNN-LSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+++..|..+..+++|+.|++++|. ++ .+| .+..+++|+.|++++|++++
T Consensus 124 i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 124 HDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp CBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC
T ss_pred cCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC
Confidence 998788889999999999999998 66 445 68899999999999999986
No 310
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.69 E-value=3.1e-17 Score=165.72 Aligned_cols=134 Identities=25% Similarity=0.241 Sum_probs=124.2
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|.|+++.|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|+
T Consensus 60 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~ 139 (477)
T 2id5_A 60 ELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND 139 (477)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTT
T ss_pred EEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCc
Confidence 37999999999999999999999999999999997666778999999999999999998889999999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+++..|..|..+++|+.|+|++|.+++.++..+..+++|+.|++++|.+.+..+
T Consensus 140 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 193 (477)
T 2id5_A 140 LVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD 193 (477)
T ss_dssp CCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECT
T ss_pred cceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeCh
Confidence 998888899999999999999999998877889999999999999999986544
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.69 E-value=5.6e-17 Score=162.11 Aligned_cols=130 Identities=25% Similarity=0.259 Sum_probs=113.3
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+|+++.+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++
T Consensus 69 L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 148 (440)
T 3zyj_A 69 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 148 (440)
T ss_dssp EECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCC
T ss_pred EEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcc
Confidence 78999999998889999999999999999999987788999999999999999999977777899999999999999999
Q ss_pred cCCCCccccCCCCCCEEEccC-CccCCcccccccccccccccccccccccC
Q 041491 82 QGPIPESFGELTSLESLDLSV-NNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++..+..|..+++|+.|+|++ |.+....+..|..+++|+.|++++|.++.
T Consensus 149 ~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 149 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp CEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred cccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 977777888899999999988 45554445578888888888888888874
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.69 E-value=4.8e-17 Score=163.18 Aligned_cols=132 Identities=23% Similarity=0.279 Sum_probs=95.7
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCC-CcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSS-NSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
.|+|++|+|+++.+..|.++++|+.|+|++ |.+....+..|.++++|+.|+|++|++++ +| .+..+++|+.|+|++|
T Consensus 151 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N 228 (452)
T 3zyi_A 151 ELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGN 228 (452)
T ss_dssp EEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTS
T ss_pred EEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCC
Confidence 378888988887777888888888888887 44554444567777777777777777773 33 4667777777777777
Q ss_pred cccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 80 ~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++.++
T Consensus 229 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 283 (452)
T 3zyi_A 229 HFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH 283 (452)
T ss_dssp CCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh
Confidence 7777667777777777777777777777667777777777777777777765433
No 313
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.69 E-value=3.2e-17 Score=170.71 Aligned_cols=132 Identities=23% Similarity=0.253 Sum_probs=96.6
Q ss_pred eecCCCcccccCCc-CccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCC---CCCCcCCCCCCCEEecc
Q 041491 2 LSLGSNELSSVIPS-TFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGD---IPPTIGGLTNLQLLSLE 77 (467)
Q Consensus 2 L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~---~~~~~~~l~~L~~l~l~ 77 (467)
|+|++|++++..|. .|.++++|+.|+|++|.+.+..|..|..+++|++|+|++|++++. .+..+..+++|+.|+|+
T Consensus 405 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls 484 (606)
T 3t6q_A 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLS 484 (606)
T ss_dssp EECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECT
T ss_pred EECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECC
Confidence 67777777766544 377777777777777777776777777777777777777777652 23457777777777777
Q ss_pred CCcccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 78 NNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 78 ~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+|++++..|..|..+++|+.|+|++|++++..|..+..+++| .|++++|++++.+|
T Consensus 485 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~ 540 (606)
T 3t6q_A 485 FCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILP 540 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCG
T ss_pred CCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCH
Confidence 777777777777777777777777777777777777777777 77777777776544
No 314
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.69 E-value=4.6e-17 Score=160.06 Aligned_cols=131 Identities=17% Similarity=0.200 Sum_probs=116.9
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|++++|.++.+++..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 50 l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 129 (390)
T 3o6n_A 50 VTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL 129 (390)
T ss_dssp EEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCcc
Confidence 67889999987777789999999999999999877778999999999999999999988888899999999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGD 132 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 132 (467)
+...+..|..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++.
T Consensus 130 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 130 SSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 965555678999999999999999988888899999999999999998864
No 315
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.69 E-value=1.3e-17 Score=174.28 Aligned_cols=98 Identities=13% Similarity=0.269 Sum_probs=75.5
Q ss_pred CCcCccCCCCccEEEccCCcCCCC-----------------CCCCcC--CCCCCCEEeccCCcccCCCCccccCCCCCCE
Q 041491 37 LPLDIENMKVVVEINLSRNYLTGD-----------------IPPTIG--GLTNLQLLSLENNRLQGPIPESFGELTSLES 97 (467)
Q Consensus 37 ~~~~~~~l~~L~~l~l~~n~l~~~-----------------~~~~~~--~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~ 97 (467)
+|..|+++++|++|+|++|++++. +|..++ ++++|++|+|++|++.+.+|..|+++++|+.
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 677777888888888888888764 777777 8888888888888887778888888888888
Q ss_pred EEccCCc-cCC-ccccccccc------ccccccccccccccCCCCC
Q 041491 98 LDLSVNN-LSG-VIPISLEKL------VYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 98 L~l~~N~-l~~-~~~~~~~~l------~~L~~l~l~~N~l~~~~~~ 135 (467)
|++++|+ +++ .+|..+..+ ++|+.|++++|+++ .+|.
T Consensus 278 L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~ 322 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPV 322 (636)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCC
T ss_pred EECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCc
Confidence 8888887 776 677777665 77777888877777 4544
No 316
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.69 E-value=2.9e-17 Score=168.94 Aligned_cols=136 Identities=20% Similarity=0.223 Sum_probs=114.9
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.|..|.++++|++|+|++|++++..|+.|.++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 30 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 109 (549)
T 2z81_A 30 SLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNP 109 (549)
T ss_dssp EEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCC
T ss_pred EEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCc
Confidence 37889999998888889999999999999999988778889999999999999999987777778999999999999999
Q ss_pred ccCC-CCccccCCCCCCEEEccCCccCCcc-cccccccccccccccccccccCCCCCC
Q 041491 81 LQGP-IPESFGELTSLESLDLSVNNLSGVI-PISLEKLVYLKDLNLSFNRLKGDIPTR 136 (467)
Q Consensus 81 l~~~-~p~~~~~~~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~~~~~~ 136 (467)
+++. .|..++.+++|+.|++++|.+.+.+ +..+..+++|+.|++++|.+++..|..
T Consensus 110 l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 167 (549)
T 2z81_A 110 YQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS 167 (549)
T ss_dssp CSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred ccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhh
Confidence 8863 5678889999999999999844444 468888999999999999988765543
No 317
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.69 E-value=9.2e-18 Score=159.89 Aligned_cols=132 Identities=15% Similarity=0.149 Sum_probs=105.6
Q ss_pred eecCCCcccccCCcCc--cCCCCccEEEcCCCcccCCCCcCccCC-----CCccEEEccCCcCCCCCCCCcCCCCCCCEE
Q 041491 2 LSLGSNELSSVIPSTF--WNLNSILSFDFSSNSLNGSLPLDIENM-----KVVVEINLSRNYLTGDIPPTIGGLTNLQLL 74 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~--~~l~~L~~L~l~~N~l~~~~~~~~~~l-----~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l 74 (467)
|+|++|++++..|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+++++|++|
T Consensus 100 L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 178 (312)
T 1wwl_A 100 LTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTL 178 (312)
T ss_dssp EEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEE
T ss_pred EEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEE
Confidence 7888899988778776 8889999999999999866 7777777 889999999999987777888899999999
Q ss_pred eccCCcccCC--CCccc--cCCCCCCEEEccCCccCCc---ccccccccccccccccccccccCCCC
Q 041491 75 SLENNRLQGP--IPESF--GELTSLESLDLSVNNLSGV---IPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 75 ~l~~N~l~~~--~p~~~--~~~~~L~~L~l~~N~l~~~---~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+|++|++.+. .|..+ ..+++|+.|+|++|.+++. ....+..+++|+.|++++|++++..|
T Consensus 179 ~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 179 DLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp ECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred ECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 9999987754 23334 7888899999999988832 22344567888999999998887653
No 318
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.68 E-value=1.7e-16 Score=137.35 Aligned_cols=107 Identities=26% Similarity=0.280 Sum_probs=71.6
Q ss_pred cEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCccccCCCCCCEEEccCC
Q 041491 24 LSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVN 103 (467)
Q Consensus 24 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N 103 (467)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56677777765 5555443 66777777777777666666777777777777777777655555666777777777777
Q ss_pred ccCCcccccccccccccccccccccccCCC
Q 041491 104 NLSGVIPISLEKLVYLKDLNLSFNRLKGDI 133 (467)
Q Consensus 104 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 133 (467)
+|++.++..|..+++|+.|+|++|+|.+++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 777655555666777777777777766543
No 319
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.68 E-value=8.4e-17 Score=173.73 Aligned_cols=134 Identities=24% Similarity=0.231 Sum_probs=113.5
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCC-CcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSL-PLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
.|+|++|+|+++.|..|.++++|++|+|++|.+.+.+ |..|.++++|+.|+|++|++++..|..|+++++|++|+|++|
T Consensus 28 ~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n 107 (844)
T 3j0a_A 28 RLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFC 107 (844)
T ss_dssp EEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTC
T ss_pred EEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCC
Confidence 3789999999988899999999999999999655455 778999999999999999998888889999999999999999
Q ss_pred cccCCCCcc--ccCCCCCCEEEccCCccCCccc-ccccccccccccccccccccCCCC
Q 041491 80 RLQGPIPES--FGELTSLESLDLSVNNLSGVIP-ISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 80 ~l~~~~p~~--~~~~~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++++..|.. |.++++|+.|+|++|.+++..+ ..|.++++|+.|++++|.+++..+
T Consensus 108 ~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~ 165 (844)
T 3j0a_A 108 GLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCE 165 (844)
T ss_dssp CCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCS
T ss_pred CCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCH
Confidence 998766654 8889999999999999987655 578888999999999998876544
No 320
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.68 E-value=1.2e-16 Score=168.73 Aligned_cols=133 Identities=20% Similarity=0.257 Sum_probs=63.7
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCC--------cCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCE
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLP--------LDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQL 73 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--------~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~ 73 (467)
|+|++|+|+++.|..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.++++|+.
T Consensus 485 L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 564 (680)
T 1ziw_A 485 LDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKI 564 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcce
Confidence 3444455554444444455555555555555443211 11444455555555555554333334455555555
Q ss_pred EeccCCcccCCCCccccCCCCCCEEEccCCccCCccccccc-ccccccccccccccccCCCC
Q 041491 74 LSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLE-KLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 74 l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~l~l~~N~l~~~~~ 134 (467)
|+|++|++++..+..|..+++|+.|+|++|+|++.+|..+. .+++|+.|++++|++.|+++
T Consensus 565 L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 565 IDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred eECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 55555555544444445555555555555555544444444 44555555555555555443
No 321
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=2.2e-16 Score=137.16 Aligned_cols=110 Identities=25% Similarity=0.286 Sum_probs=100.9
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|+
T Consensus 32 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 111 (177)
T 2o6r_A 32 RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQ 111 (177)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCc
Confidence 37899999999888889999999999999999997777778999999999999999998877789999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCccc
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIP 110 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~ 110 (467)
+++..+..+..+++|+.|++++|.+++..|
T Consensus 112 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 112 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 998777778999999999999999997654
No 322
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.67 E-value=8.3e-17 Score=142.52 Aligned_cols=123 Identities=13% Similarity=0.220 Sum_probs=74.8
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc-
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR- 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~- 80 (467)
|+|++|.++. +..+..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..++.+++|+.|+|++|+
T Consensus 71 L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~ 148 (197)
T 4ezg_A 71 LTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA 148 (197)
T ss_dssp EEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTB
T ss_pred EEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCC
Confidence 5566665543 2356666666666666666665556666666666666666666665555666666666666666666
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCccccccccccccccccccccccc
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLK 130 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 130 (467)
++ .+| .+..+++|+.|++++|.+++. + .+..+++|+.|++++|++.
T Consensus 149 i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 149 IT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC---
T ss_pred cc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcccC
Confidence 44 344 466666666666666666643 2 5566666666666666654
No 323
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.67 E-value=4e-17 Score=158.27 Aligned_cols=130 Identities=25% Similarity=0.271 Sum_probs=117.8
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCC-CCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIP-PTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~-~~~~~l~~L~~l~l~~N 79 (467)
.|+|++|+++++.|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+ ..+.++++|++|++++|
T Consensus 80 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n 159 (353)
T 2z80_A 80 ALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNM 159 (353)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEES
T ss_pred EEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCC
Confidence 37999999999999999999999999999999996555569999999999999999995444 47999999999999999
Q ss_pred -cccCCCCccccCCCCCCEEEccCCccCCccccccccccccccccccccccc
Q 041491 80 -RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLK 130 (467)
Q Consensus 80 -~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 130 (467)
.+.+..|..|..+++|+.|++++|.+++..|..+..+++|+.|++++|.++
T Consensus 160 ~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 160 DTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp SSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred ccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 577777789999999999999999999988999999999999999999875
No 324
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=2.1e-17 Score=176.55 Aligned_cols=133 Identities=18% Similarity=0.296 Sum_probs=108.8
Q ss_pred eecCCCcccccCCcCccCCCCccEEEc-CCCcccCC--------------------------------------------
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDF-SSNSLNGS-------------------------------------------- 36 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l-~~N~l~~~-------------------------------------------- 36 (467)
|+|++|+++|.+|+.|++|++|+.|+| ++|.++|.
T Consensus 328 L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~ 407 (876)
T 4ecn_A 328 LSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDA 407 (876)
T ss_dssp EECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHH
T ss_pred EECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHH
Confidence 788888888888888888888888888 77755443
Q ss_pred --------------------------------CCcCccCCCCccEEEccCCcCCC-----------------CCCCCcC-
Q 041491 37 --------------------------------LPLDIENMKVVVEINLSRNYLTG-----------------DIPPTIG- 66 (467)
Q Consensus 37 --------------------------------~~~~~~~l~~L~~l~l~~n~l~~-----------------~~~~~~~- 66 (467)
+|..|.++++|+.|+|++|++++ .+|..++
T Consensus 408 l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f 487 (876)
T 4ecn_A 408 INRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSW 487 (876)
T ss_dssp HHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCG
T ss_pred hhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhh
Confidence 67778888888888888888887 3788877
Q ss_pred -CCCCCCEEeccCCcccCCCCccccCCCCCCEEEccCCc-cCC-cccccccccc-------cccccccccccccCCCCC
Q 041491 67 -GLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNN-LSG-VIPISLEKLV-------YLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 67 -~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N~-l~~-~~~~~~~~l~-------~L~~l~l~~N~l~~~~~~ 135 (467)
++++|+.|+|++|++.+.+|..|+++++|+.|+|++|+ +++ .+|..+..++ +|+.|++++|.++ .+|.
T Consensus 488 ~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~ 565 (876)
T 4ecn_A 488 SNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPA 565 (876)
T ss_dssp GGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCC
T ss_pred ccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCC
Confidence 88888888888888888888888888888888888887 887 6777766665 8888888888887 5554
No 325
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.66 E-value=2.6e-17 Score=172.06 Aligned_cols=127 Identities=22% Similarity=0.440 Sum_probs=115.7
Q ss_pred CCcccccCCcCccCCCCccEEEcCCCcccCC-----------------CCcCcc--CCCCccEEEccCCcCCCCCCCCcC
Q 041491 6 SNELSSVIPSTFWNLNSILSFDFSSNSLNGS-----------------LPLDIE--NMKVVVEINLSRNYLTGDIPPTIG 66 (467)
Q Consensus 6 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-----------------~~~~~~--~l~~L~~l~l~~n~l~~~~~~~~~ 66 (467)
+|++++ +|..|+++++|++|+|++|.+++. +|..+. ++++|++|+|++|++++.+|..|+
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~ 270 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK 270 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh
Confidence 789998 788999999999999999999975 899988 999999999999999999999999
Q ss_pred CCCCCCEEeccCCc-ccC-CCCccccCC------CCCCEEEccCCccCCcccc--cccccccccccccccccccCCCC
Q 041491 67 GLTNLQLLSLENNR-LQG-PIPESFGEL------TSLESLDLSVNNLSGVIPI--SLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 67 ~l~~L~~l~l~~N~-l~~-~~p~~~~~~------~~L~~L~l~~N~l~~~~~~--~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++++|++|+|++|+ ++| .+|..++.+ ++|+.|++++|.++ .+|. .+..+++|+.|++++|.++|.+|
T Consensus 271 ~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip 347 (636)
T 4eco_A 271 ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP 347 (636)
T ss_dssp TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC
T ss_pred cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh
Confidence 99999999999998 888 788888776 89999999999999 6777 89999999999999999998777
No 326
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.66 E-value=6.7e-17 Score=140.38 Aligned_cols=122 Identities=18% Similarity=0.173 Sum_probs=58.9
Q ss_pred eecCCCcccccCCcCccCCC-CccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIPSTFWNLN-SILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
|+|++|+++.+ |. +..+. +|++|+|++|.|++. ..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+
T Consensus 24 L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 99 (176)
T 1a9n_A 24 LDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNS 99 (176)
T ss_dssp EECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCC
T ss_pred EEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCc
Confidence 44555555543 32 22222 555555555555532 345555555555555555553322333555555555555555
Q ss_pred ccCCCCc--cccCCCCCCEEEccCCccCCcccc----cccccccccccccccccc
Q 041491 81 LQGPIPE--SFGELTSLESLDLSVNNLSGVIPI----SLEKLVYLKDLNLSFNRL 129 (467)
Q Consensus 81 l~~~~p~--~~~~~~~L~~L~l~~N~l~~~~~~----~~~~l~~L~~l~l~~N~l 129 (467)
|+. +|. .+..+++|+.|++++|.++. .|. .+..+++|+.|++++|.+
T Consensus 100 i~~-~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 100 LVE-LGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCC-GGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCc-chhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 542 333 45555555555555555542 233 245555555555555544
No 327
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.66 E-value=6e-16 Score=133.46 Aligned_cols=107 Identities=21% Similarity=0.248 Sum_probs=96.8
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|++++|+++. +|..+ .++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 37899999997 56555 3899999999999998889999999999999999999998877888999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCccc
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIP 110 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~ 110 (467)
|++..+..|..+++|+.|+|++|.++...+
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 998777789999999999999999986643
No 328
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.66 E-value=3.4e-16 Score=162.48 Aligned_cols=128 Identities=26% Similarity=0.273 Sum_probs=116.6
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|.|+++.|..|..+++|++|+|++|.|++..|..|+++++|+.|+|++|.+++..+..|+++++|++|+|++|.
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~ 158 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 158 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCc
Confidence 37999999999999999999999999999999998888889999999999999999997766778999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+++..|..|..+++|+.|+|++|.+++.. +..+++|+.|++++|.+++
T Consensus 159 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 159 LERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred CCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 99988889999999999999999999763 4556778888888888775
No 329
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.66 E-value=4.2e-16 Score=149.57 Aligned_cols=127 Identities=18% Similarity=0.293 Sum_probs=96.7
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+|+++.+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|..+. ++|+.|++++|++
T Consensus 57 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l 133 (330)
T 1xku_A 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEI 133 (330)
T ss_dssp EECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCC
T ss_pred EECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcc
Confidence 677788888777777888888888888888887666777888888888888888877 5565554 6788888888888
Q ss_pred cCCCCccccCCCCCCEEEccCCccCC--cccccccccccccccccccccccC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSG--VIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++..+..|..+++|+.|++++|.++. ..+..+..+++|+.|++++|.++.
T Consensus 134 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 134 TKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp CBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred cccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 77666677778888888888888753 556777777888888888887764
No 330
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.66 E-value=3.1e-16 Score=150.64 Aligned_cols=129 Identities=23% Similarity=0.308 Sum_probs=75.7
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCccc--CCCCcCccCC--------------------CCccEEEccCCcCCC
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLN--GSLPLDIENM--------------------KVVVEINLSRNYLTG 59 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~~~~~~~l--------------------~~L~~l~l~~n~l~~ 59 (467)
|+|++|+++++.+..|.++++|+.|+|++|.++ +..|..|..+ ++|++|+|++|++++
T Consensus 128 L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~ 207 (332)
T 2ft3_A 128 LRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQA 207 (332)
T ss_dssp EECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCC
T ss_pred EECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCc
Confidence 667777777766667777888888888888775 2455555554 234444444444444
Q ss_pred CCCCCcCCCCCCCEEeccCCcccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 60 DIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 60 ~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
..+..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++
T Consensus 208 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 208 IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCB
T ss_pred cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCc
Confidence 44445555555555555555555544445555555555555555555 344445555555555555555554
No 331
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.66 E-value=7.4e-17 Score=170.50 Aligned_cols=119 Identities=23% Similarity=0.349 Sum_probs=83.6
Q ss_pred cCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCccccC
Q 041491 12 VIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGE 91 (467)
Q Consensus 12 ~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~ 91 (467)
++|..|..+++|+.|+|++|.+. .+|..+.++++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..|+.
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 34667777777777777777776 56666667777777777777777 66777777777777777777777 56777777
Q ss_pred CCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 92 LTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 92 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+++|+.|+|++|.|+ .+|..|..+++|+.|+|++|+|++.+|
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p 333 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFL 333 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHH
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCCh
Confidence 777777777777776 456667777777777777777776544
No 332
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.66 E-value=6.3e-16 Score=148.51 Aligned_cols=126 Identities=23% Similarity=0.410 Sum_probs=76.9
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+++++.|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|..+. ++|++|++++|++
T Consensus 59 L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i 135 (332)
T 2ft3_A 59 LDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRI 135 (332)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCC
T ss_pred EECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCcc
Confidence 556666666655666666666666666666666555666666666666666666665 4444443 5666666666666
Q ss_pred cCCCCccccCCCCCCEEEccCCccC--CcccccccccccccccccccccccC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLS--GVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~--~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++..+..|..+++|+.|++++|.++ +..|..+..+ +|+.|++++|.+++
T Consensus 136 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 136 RKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp CCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 6554455666666666666666664 2445555555 56666666666654
No 333
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.66 E-value=5.1e-16 Score=152.62 Aligned_cols=128 Identities=26% Similarity=0.273 Sum_probs=116.2
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|.++++|++|+|++|+
T Consensus 73 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~ 152 (390)
T 3o6n_A 73 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 152 (390)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCc
Confidence 37999999999989999999999999999999998888889999999999999999996555667999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+++..|..|..+++|+.|++++|.+++.. +..+++|+.|++++|.+++
T Consensus 153 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 153 LERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred cCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccc
Confidence 99888889999999999999999999653 5567888999999998875
No 334
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=3.7e-16 Score=137.72 Aligned_cols=107 Identities=28% Similarity=0.376 Sum_probs=99.6
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+|+. +|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 35 ~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~ 113 (193)
T 2wfh_A 35 ELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND 113 (193)
T ss_dssp EEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCC
Confidence 37999999995 67899999999999999999998888899999999999999999998888899999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCc
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGV 108 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~ 108 (467)
|++..+..|..+++|+.|+|++|.+...
T Consensus 114 l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 114 ISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9977777899999999999999999854
No 335
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=2.1e-16 Score=133.16 Aligned_cols=114 Identities=21% Similarity=0.201 Sum_probs=103.4
Q ss_pred CCCCccEEEcCCCccc-CCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCccccCCCCCCE
Q 041491 19 NLNSILSFDFSSNSLN-GSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLES 97 (467)
Q Consensus 19 ~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~ 97 (467)
..++|+.|++++|.++ +.+|..+..+++|+.|+|++|++++. ..++.+++|+.|+|++|++++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 78899999999999999999999965 78999999999999999999878888888999999
Q ss_pred EEccCCccCCc-ccccccccccccccccccccccCCCC
Q 041491 98 LDLSVNNLSGV-IPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 98 L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
|++++|.+++. .+..+..+++|+.|++++|++++..+
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999999975 34889999999999999999986543
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.65 E-value=9e-17 Score=146.85 Aligned_cols=129 Identities=16% Similarity=0.235 Sum_probs=111.5
Q ss_pred CeecCCCc-ccccCCcCccCCCCccEEEcCC-CcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCC---EEe
Q 041491 1 NLSLGSNE-LSSVIPSTFWNLNSILSFDFSS-NSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQ---LLS 75 (467)
Q Consensus 1 ~L~l~~n~-l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~---~l~ 75 (467)
.|+|++|+ ++++.+..|.++++|++|+|++ |+|++..+..|.++++|+.|+|++|++++ +|. |..+++|+ .|+
T Consensus 59 ~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~ 136 (239)
T 2xwt_C 59 RIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILE 136 (239)
T ss_dssp EEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEE
T ss_pred EEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEE
Confidence 37899997 9988888999999999999998 99997777889999999999999999985 666 88889998 999
Q ss_pred ccCC-cccCCCCccccCCCCCC-EEEccCCccCCccccccccccccccccccccc-ccCC
Q 041491 76 LENN-RLQGPIPESFGELTSLE-SLDLSVNNLSGVIPISLEKLVYLKDLNLSFNR-LKGD 132 (467)
Q Consensus 76 l~~N-~l~~~~p~~~~~~~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~-l~~~ 132 (467)
+++| ++++..+..|..+++|+ .|++++|.++..++..+.. ++|+.|++++|+ ++..
T Consensus 137 l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i 195 (239)
T 2xwt_C 137 ITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVI 195 (239)
T ss_dssp EESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEE
T ss_pred CCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccC
Confidence 9999 99877777899999999 9999999998554555555 889999999995 7753
No 337
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.65 E-value=3.4e-17 Score=155.97 Aligned_cols=132 Identities=23% Similarity=0.266 Sum_probs=97.2
Q ss_pred eecCCCcccccCCcCccCC-----CCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCC--CCCCc--CCCCCCC
Q 041491 2 LSLGSNELSSVIPSTFWNL-----NSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGD--IPPTI--GGLTNLQ 72 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~--~~~~~--~~l~~L~ 72 (467)
|+|++|++++. |..|..+ ++|++|+|++|++.+..|..|..+++|++|+|++|++++. .|..+ ..+++|+
T Consensus 126 L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~ 204 (312)
T 1wwl_A 126 LNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQ 204 (312)
T ss_dssp EEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCC
T ss_pred EEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCC
Confidence 67888888876 7777766 8888888888888877778888888888888888887654 23333 7788888
Q ss_pred EEeccCCcccCC--CC-ccccCCCCCCEEEccCCccCCccc-ccccccccccccccccccccCCCCC
Q 041491 73 LLSLENNRLQGP--IP-ESFGELTSLESLDLSVNNLSGVIP-ISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 73 ~l~l~~N~l~~~--~p-~~~~~~~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
+|+|++|++++. ++ ..+..+++|+.|+|++|++++.+| ..+..+++|+.|++++|.|+ .+|.
T Consensus 205 ~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~ 270 (312)
T 1wwl_A 205 VLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPK 270 (312)
T ss_dssp EEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCS
T ss_pred EEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhh
Confidence 888888888732 11 334567788888888888887664 45566778888888888887 4443
No 338
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.64 E-value=1.1e-15 Score=132.18 Aligned_cols=105 Identities=20% Similarity=0.205 Sum_probs=94.9
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
+++++|+++. +|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|
T Consensus 17 l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 17 VNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp EECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 7899999986 566564 8999999999999988899999999999999999999977777789999999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcc
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVI 109 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~ 109 (467)
++..+..|..+++|+.|+|++|.+....
T Consensus 94 ~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 94 KSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9877777999999999999999998653
No 339
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=5.2e-16 Score=133.59 Aligned_cols=114 Identities=22% Similarity=0.200 Sum_probs=103.5
Q ss_pred CCCCccEEEcCCCccc-CCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCccccCCCCCCE
Q 041491 19 NLNSILSFDFSSNSLN-GSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLES 97 (467)
Q Consensus 19 ~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~ 97 (467)
..++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++.+|..+..+++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3589999999999998 77898899999999999999999965 88999999999999999999878888888999999
Q ss_pred EEccCCccCCccc-ccccccccccccccccccccCCCC
Q 041491 98 LDLSVNNLSGVIP-ISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 98 L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
|+|++|.+++..+ ..+..+++|+.|++++|++++.++
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 9999999997543 789999999999999999987544
No 340
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.64 E-value=1.1e-16 Score=161.64 Aligned_cols=124 Identities=21% Similarity=0.141 Sum_probs=105.7
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcC-CCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIG-GLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~-~l~~L~~l~l~~N~ 80 (467)
|+|++|+|+++.+.. +++|+.|+|++|.|++..|..|.++++|+.|+|++|++++.+|..+. .+++|+.|+|++|.
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 677888888766543 57899999999999988888999999999999999999988888876 78999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
|++. | .+..+++|+.|+|++|.|++.+| .+..+++|+.|++++|.+++
T Consensus 181 l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 181 IYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp CCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE
T ss_pred cccc-c-ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc
Confidence 9875 3 24468999999999999997654 48889999999999999986
No 341
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.63 E-value=1.3e-16 Score=168.69 Aligned_cols=133 Identities=24% Similarity=0.343 Sum_probs=119.1
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+|.. +|..+.++++|++|+|++|.|+ .+|..|.++++|+.|+|++|+|+ .+|..|++|++|++|+|++|.
T Consensus 228 ~L~Ls~n~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 304 (727)
T 4b8c_D 228 ALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM 304 (727)
T ss_dssp EEECTTSCCSC-CCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC
T ss_pred EEECCCCCCCC-CChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC
Confidence 38999999995 6666779999999999999999 89999999999999999999999 889999999999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCccccccccccc-ccccccccccccCCCCCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVY-LKDLNLSFNRLKGDIPTRS 137 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~-L~~l~l~~N~l~~~~~~~~ 137 (467)
|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..+++++|.+++.+|...
T Consensus 305 l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l 361 (727)
T 4b8c_D 305 VT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER 361 (727)
T ss_dssp CC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred CC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc
Confidence 98 67888999999999999999999999988876543 3458899999999888654
No 342
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.63 E-value=2.7e-16 Score=160.63 Aligned_cols=128 Identities=23% Similarity=0.310 Sum_probs=113.4
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccC--CCCcCccCCCCccEEEccCCcCCCCCCC-CcCCCCCCCEEecc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNG--SLPLDIENMKVVVEINLSRNYLTGDIPP-TIGGLTNLQLLSLE 77 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~l~l~~n~l~~~~~~-~~~~l~~L~~l~l~ 77 (467)
.|+|++|++++..|..|.++++|++|+|++|++++ .+|..+..+++|+.|+|++|++++.+|. .+..+++|+.|+++
T Consensus 328 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls 407 (520)
T 2z7x_B 328 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMS 407 (520)
T ss_dssp EEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECC
T ss_pred EEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECc
Confidence 37999999999899999999999999999999986 4567899999999999999999975665 58889999999999
Q ss_pred CCcccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 78 NNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 78 ~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+|++++..|..+. ++|+.|++++|+++ .+|..+..+++|+.|++++|+++.
T Consensus 408 ~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 458 (520)
T 2z7x_B 408 SNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS 458 (520)
T ss_dssp SSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred CCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc
Confidence 9999887776664 78999999999999 567777799999999999999985
No 343
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.63 E-value=4.3e-16 Score=160.66 Aligned_cols=128 Identities=23% Similarity=0.312 Sum_probs=110.0
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCC--CCcCccCCCCccEEEccCCcCCCCCCC-CcCCCCCCCEEecc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGS--LPLDIENMKVVVEINLSRNYLTGDIPP-TIGGLTNLQLLSLE 77 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~~l~l~~n~l~~~~~~-~~~~l~~L~~l~l~ 77 (467)
.|+|++|++++..|..|.++++|++|+|++|++++. .|..|.++++|+.|+|++|++++.+|. .+..+++|+.|+|+
T Consensus 357 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~ 436 (562)
T 3a79_B 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLS 436 (562)
T ss_dssp EEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECC
T ss_pred EEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECC
Confidence 378999999998999999999999999999999863 346789999999999999999974554 58889999999999
Q ss_pred CCcccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 78 NNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 78 ~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|+.|++++|+++.
T Consensus 437 ~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 437 SNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp SSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC
T ss_pred CCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC
Confidence 9999877666554 68999999999998 456666689999999999999985
No 344
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.63 E-value=8.1e-16 Score=147.60 Aligned_cols=126 Identities=29% Similarity=0.375 Sum_probs=95.6
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccC--CCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNG--SLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
|+|++|+++++.+..|.++++|+.|+|++|.+.. ..+..|.++++|+.|++++|+++ .+|..+. ++|+.|++++|
T Consensus 126 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n 202 (330)
T 1xku_A 126 LRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGN 202 (330)
T ss_dssp EECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTS
T ss_pred EECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCC
Confidence 6788888888777788888888888888888853 56777888888888888888877 4555443 67777777777
Q ss_pred cccCCCCccccCCCCCCEEEccCCccCCccccccccccccccccccccccc
Q 041491 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLK 130 (467)
Q Consensus 80 ~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 130 (467)
++++..|..|..+++|+.|++++|.+++..+..+..+++|+.|++++|+++
T Consensus 203 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 203 KITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp CCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 777666677777777777777777777666667777777777777777776
No 345
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.63 E-value=7.6e-16 Score=144.98 Aligned_cols=122 Identities=25% Similarity=0.350 Sum_probs=79.0
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|++++|.++.+ | .+..+++|++|+|++|++++..+ +.++++|+.|+|++|++++ +| .+..+++|+.|+|++|++
T Consensus 51 L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i 124 (291)
T 1h6t_A 51 IIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGI 124 (291)
T ss_dssp EECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCC
T ss_pred EEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcC
Confidence 56677777654 2 36667777777777777764333 6677777777777777763 23 366677777777777777
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDI 133 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 133 (467)
++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..
T Consensus 125 ~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 125 SDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp CCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccch
Confidence 643 3466667777777777776654 45666666777777777666543
No 346
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.63 E-value=2e-16 Score=150.93 Aligned_cols=124 Identities=20% Similarity=0.122 Sum_probs=91.4
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcC-CCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIG-GLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~-~l~~L~~l~l~~N~ 80 (467)
|+|++|+++++.+.. +++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..+. .+++|++|+|++|+
T Consensus 104 L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 180 (317)
T 3o53_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (317)
T ss_dssp EECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCc
Confidence 567777777665543 46788888888888876677788888888888888888766666653 67888888888888
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+++. | ....+++|+.|+|++|++++. |..+..+++|+.|++++|++++
T Consensus 181 l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~ 228 (317)
T 3o53_A 181 IYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL 228 (317)
T ss_dssp CCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE
T ss_pred Cccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccc
Confidence 8754 3 233477888888888888754 4447778888888888888874
No 347
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.63 E-value=2e-16 Score=150.51 Aligned_cols=128 Identities=20% Similarity=0.195 Sum_probs=62.1
Q ss_pred eecCCCcccccCC----cCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCC--C--CCCcCCCCCCCE
Q 041491 2 LSLGSNELSSVIP----STFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGD--I--PPTIGGLTNLQL 73 (467)
Q Consensus 2 L~l~~n~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~--~--~~~~~~l~~L~~ 73 (467)
|+|++|++++..| ..+..+++|++|+|++|++.+..|..|.++++|++|+|++|++++. + +..+..+++|++
T Consensus 122 L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~ 201 (310)
T 4glp_A 122 LRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQN 201 (310)
T ss_dssp CEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCS
T ss_pred EEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCE
Confidence 4555555554333 2233455555555555555554455555555555555555554421 1 122244555555
Q ss_pred EeccCCcccCCCCc----cccCCCCCCEEEccCCccCCccccccccc---cccccccccccccc
Q 041491 74 LSLENNRLQGPIPE----SFGELTSLESLDLSVNNLSGVIPISLEKL---VYLKDLNLSFNRLK 130 (467)
Q Consensus 74 l~l~~N~l~~~~p~----~~~~~~~L~~L~l~~N~l~~~~~~~~~~l---~~L~~l~l~~N~l~ 130 (467)
|+|++|+++. +|. .+..+++|+.|+|++|++++..|..+..+ ++|+.|++++|+|+
T Consensus 202 L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 202 LALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE 264 (310)
T ss_dssp CBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC
T ss_pred EECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC
Confidence 5555555542 222 13444555555555555554444444443 35555555555554
No 348
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.63 E-value=7.2e-16 Score=158.96 Aligned_cols=124 Identities=23% Similarity=0.260 Sum_probs=84.7
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
+++++|++++ +|..+. ++|+.|+|++|.|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|
T Consensus 36 l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 112 (562)
T 3a79_B 36 VDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRL 112 (562)
T ss_dssp EECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcC
Confidence 5677777775 344442 6777777777777766666777777777777777777766667777777777777777777
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCc-ccccccccccccccccccccccC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGV-IPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+ .+|.. .+++|+.|+|++|.+++. +|..+.++++|+.|++++|++++
T Consensus 113 ~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 113 Q-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp C-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred C-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 6 34444 677777777777777653 24667777777777777777654
No 349
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.63 E-value=5.9e-16 Score=158.77 Aligned_cols=122 Identities=25% Similarity=0.284 Sum_probs=101.8
Q ss_pred ecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCccc
Q 041491 3 SLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQ 82 (467)
Q Consensus 3 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~ 82 (467)
++++|.|+++.+. .|+.|+|++|.|++ +|. |.++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|+
T Consensus 429 ~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 499 (567)
T 1dce_A 429 FLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE 499 (567)
T ss_dssp HHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred hhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCC
Confidence 3455666654332 48889999999985 676 899999999999999998 77888999999999999999999
Q ss_pred CCCCccccCCCCCCEEEccCCccCCcc-cccccccccccccccccccccCCCCC
Q 041491 83 GPIPESFGELTSLESLDLSVNNLSGVI-PISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 83 ~~~p~~~~~~~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
+ +| .++.+++|+.|+|++|+|++.. |..+..+++|+.|++++|++++.++.
T Consensus 500 ~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 500 N-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp C-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred C-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 6 66 7889999999999999999876 88899999999999999999876654
No 350
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.62 E-value=2.1e-16 Score=150.28 Aligned_cols=135 Identities=14% Similarity=0.104 Sum_probs=115.1
Q ss_pred CeecCCCcccccCCcCc--cCCCCccEEEcCCCcccCCCC----cCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEE
Q 041491 1 NLSLGSNELSSVIPSTF--WNLNSILSFDFSSNSLNGSLP----LDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLL 74 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~--~~l~~L~~L~l~~N~l~~~~~----~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l 74 (467)
.|+|++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|+++++|++|
T Consensus 95 ~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 174 (310)
T 4glp_A 95 ELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSL 174 (310)
T ss_dssp EEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEE
T ss_pred EEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEE
Confidence 37899999999999988 999999999999999997655 345679999999999999998888999999999999
Q ss_pred eccCCcccCC--C--CccccCCCCCCEEEccCCccCCcccc----cccccccccccccccccccCCCCCC
Q 041491 75 SLENNRLQGP--I--PESFGELTSLESLDLSVNNLSGVIPI----SLEKLVYLKDLNLSFNRLKGDIPTR 136 (467)
Q Consensus 75 ~l~~N~l~~~--~--p~~~~~~~~L~~L~l~~N~l~~~~~~----~~~~l~~L~~l~l~~N~l~~~~~~~ 136 (467)
+|++|++.+. + +..+..+++|+.|+|++|+++.. +. .+..+++|+.|++++|.+++..|..
T Consensus 175 ~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~ 243 (310)
T 4glp_A 175 DLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAALAAAGVQPHSLDLSHNSLRATVNPS 243 (310)
T ss_dssp ECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHHHHHHTCCCSSEECTTSCCCCCCCSC
T ss_pred ECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHHHHhcCCCCCEEECCCCCCCccchhh
Confidence 9999998652 2 23347899999999999999843 33 3578899999999999999875543
No 351
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.62 E-value=2.4e-16 Score=161.72 Aligned_cols=118 Identities=26% Similarity=0.299 Sum_probs=106.1
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+|++ +|. |+++++|+.|+|++|.|+ .+|..|+++++|+.|+|++|+|++ +| .++++++|+.|+|++|+|
T Consensus 446 L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l 520 (567)
T 1dce_A 446 LHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRL 520 (567)
T ss_dssp EECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCC
T ss_pred EEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCC
Confidence 8999999998 465 999999999999999999 789999999999999999999996 67 899999999999999999
Q ss_pred cCCC-CccccCCCCCCEEEccCCccCCccccc---cccccccccccc
Q 041491 82 QGPI-PESFGELTSLESLDLSVNNLSGVIPIS---LEKLVYLKDLNL 124 (467)
Q Consensus 82 ~~~~-p~~~~~~~~L~~L~l~~N~l~~~~~~~---~~~l~~L~~l~l 124 (467)
++.. |..++.+++|+.|+|++|.|++.+|.. +..+++|+.|++
T Consensus 521 ~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 521 QQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9876 999999999999999999999876532 334778888764
No 352
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.62 E-value=1.2e-15 Score=144.84 Aligned_cols=120 Identities=23% Similarity=0.429 Sum_probs=59.5
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|++++|+++.+ | .+..+++|++|+|++|.+++ ++. +..+++|++|+|++|++++ ++ .+..+++|+.|+|++|++
T Consensus 46 L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l 119 (308)
T 1h6u_A 46 LSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQI 119 (308)
T ss_dssp EECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCC
T ss_pred EEeeCCCccCc-h-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCC
Confidence 44555555542 2 35555555555555555553 222 5555555555555555542 22 355555555555555555
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++. | .+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++
T Consensus 120 ~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 120 TDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 532 2 14555555555555555554322 4445555555555555443
No 353
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.62 E-value=4.7e-16 Score=158.82 Aligned_cols=124 Identities=23% Similarity=0.216 Sum_probs=76.4
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|++++|+++. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+|
T Consensus 5 l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 81 (520)
T 2z7x_B 5 VDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL 81 (520)
T ss_dssp EECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCC
T ss_pred EecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCce
Confidence 5666666664 344443 5666666666666655555666666666666666666655566666666666666666666
Q ss_pred cCCCCccccCCCCCCEEEccCCccCC-cccccccccccccccccccccccC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSG-VIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++ +|.. .+++|++|+|++|.+++ .+|..+..+++|+.|++++|.+++
T Consensus 82 ~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 82 VK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred ee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch
Confidence 63 4443 56666666666666665 245666666666666666666553
No 354
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.62 E-value=8.1e-16 Score=146.03 Aligned_cols=123 Identities=28% Similarity=0.421 Sum_probs=99.3
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++ +.|..+++|++|+|++|.+++ ++. +..+++|++|+|++|++++..+ +..+++|+.|+|++|+
T Consensus 89 ~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 162 (308)
T 1h6u_A 89 ELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQ 162 (308)
T ss_dssp EEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred EEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCc
Confidence 378889998874 368889999999999999885 443 8888999999999999885433 8888889999999998
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDI 133 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 133 (467)
+++. +. +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..
T Consensus 163 l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 163 VSDL-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp CCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG
T ss_pred CCCC-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc
Confidence 8864 33 8888889999999998886544 778888888888888887654
No 355
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.62 E-value=1.1e-15 Score=164.88 Aligned_cols=135 Identities=27% Similarity=0.305 Sum_probs=119.6
Q ss_pred CeecCCCccc-ccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCC--cCCCCCCCEEecc
Q 041491 1 NLSLGSNELS-SVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPT--IGGLTNLQLLSLE 77 (467)
Q Consensus 1 ~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~--~~~l~~L~~l~l~ 77 (467)
+|+|++|.+. .+.|..|.++++|++|+|++|.|.+..|+.|.++++|++|+|++|.+++.+|.. |.++++|++|+|+
T Consensus 52 ~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls 131 (844)
T 3j0a_A 52 LLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLS 131 (844)
T ss_dssp EEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEE
T ss_pred EEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECC
Confidence 3789999555 455899999999999999999999888999999999999999999999866665 9999999999999
Q ss_pred CCcccCCCC-ccccCCCCCCEEEccCCccCCccccccccc--ccccccccccccccCCCCC
Q 041491 78 NNRLQGPIP-ESFGELTSLESLDLSVNNLSGVIPISLEKL--VYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 78 ~N~l~~~~p-~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l--~~L~~l~l~~N~l~~~~~~ 135 (467)
+|.+++..| ..|+++++|+.|+|++|.+++..|..+..+ ++|+.|++++|.+.+..+.
T Consensus 132 ~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~ 192 (844)
T 3j0a_A 132 KNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSV 192 (844)
T ss_dssp SCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCC
T ss_pred CCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCcccccccc
Confidence 999987655 579999999999999999999889888887 7899999999988876554
No 356
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.61 E-value=1.3e-15 Score=141.20 Aligned_cols=120 Identities=23% Similarity=0.316 Sum_probs=97.1
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+|+.+ | .+..+++|++|+|++|+|++..+ +..+++|+.|+|++|++++ +|.... ++|+.|+|++|++
T Consensus 46 L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l 118 (263)
T 1xeu_A 46 FNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNEL 118 (263)
T ss_dssp EECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCC
T ss_pred EECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCcc
Confidence 78899999864 4 68889999999999999985444 8899999999999999985 444333 8899999999988
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGD 132 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 132 (467)
++. + .+..+++|+.|+|++|++++. + .+..+++|+.|++++|++++.
T Consensus 119 ~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 119 RDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp SBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 863 3 588888899999999998865 3 678888888889998888765
No 357
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=1.7e-16 Score=169.57 Aligned_cols=131 Identities=18% Similarity=0.317 Sum_probs=109.8
Q ss_pred CeecCCCcccc-----------------cCCcCcc--CCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCc-CCC-
Q 041491 1 NLSLGSNELSS-----------------VIPSTFW--NLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNY-LTG- 59 (467)
Q Consensus 1 ~L~l~~n~l~~-----------------~~p~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~-l~~- 59 (467)
.|+|++|+|++ .+|..++ ++++|++|+|++|.+.+.+|..|.++++|+.|+|++|+ ++|
T Consensus 452 ~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~ 531 (876)
T 4ecn_A 452 IIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAA 531 (876)
T ss_dssp EEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHH
T ss_pred EEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccc
Confidence 37889999998 3788877 99999999999999888999999999999999999998 887
Q ss_pred CCCCCcCCC-------CCCCEEeccCCcccCCCCc--cccCCCCCCEEEccCCccCCccccccccccccccccccccccc
Q 041491 60 DIPPTIGGL-------TNLQLLSLENNRLQGPIPE--SFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLK 130 (467)
Q Consensus 60 ~~~~~~~~l-------~~L~~l~l~~N~l~~~~p~--~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 130 (467)
.+|..++.+ ++|+.|+|++|+++ .+|. .++++++|+.|+|++|.++ .+| .+..+++|+.|++++|+++
T Consensus 532 ~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~ 608 (876)
T 4ecn_A 532 QLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE 608 (876)
T ss_dssp HHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS
T ss_pred cchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc
Confidence 677655444 48999999999988 6787 8888889999999999888 666 8888888888899888888
Q ss_pred CCCCC
Q 041491 131 GDIPT 135 (467)
Q Consensus 131 ~~~~~ 135 (467)
.+|.
T Consensus 609 -~lp~ 612 (876)
T 4ecn_A 609 -EIPE 612 (876)
T ss_dssp -CCCT
T ss_pred -cchH
Confidence 5553
No 358
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.61 E-value=3.8e-16 Score=157.85 Aligned_cols=125 Identities=17% Similarity=0.151 Sum_probs=62.3
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCcc-CCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIE-NMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
|+|++|+|+++.|..|.++++|+.|+|++|.|++..|..+. .+++|+.|+|++|.+++. |. +..+++|+.|+|++|+
T Consensus 125 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~ 202 (487)
T 3oja_A 125 IYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNK 202 (487)
T ss_dssp EECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSC
T ss_pred EECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCC
Confidence 44555555555455555555555555555555544444443 455555555555555533 11 2235555555555555
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCccccccccccccccccccccccc
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLK 130 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 130 (467)
|++.+ ..+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|++.
T Consensus 203 l~~~~-~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 203 LAFMG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CCEEC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred CCCCC-HhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 55422 235555555555555555553 3444445555555555555554
No 359
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.61 E-value=4.4e-16 Score=160.12 Aligned_cols=130 Identities=25% Similarity=0.284 Sum_probs=113.6
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCC-CCCCcCCCCCCCEEeccCC
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGD-IPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~-~~~~~~~l~~L~~l~l~~N 79 (467)
+|+|++|+++++.|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++. .|..++++++|++|++++|
T Consensus 54 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n 133 (549)
T 2z81_A 54 VLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNV 133 (549)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEES
T ss_pred EEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCC
Confidence 479999999999999999999999999999999987777799999999999999999863 5778999999999999999
Q ss_pred cccCCCC-ccccCCCCCCEEEccCCccCCccccccccccccccccccccccc
Q 041491 80 RLQGPIP-ESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLK 130 (467)
Q Consensus 80 ~l~~~~p-~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 130 (467)
++.+.+| ..|..+++|+.|++++|.+++..|..+..+++|+.|++++|.+.
T Consensus 134 ~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 134 ETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp SSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred ccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 9544444 68999999999999999999988888887777777766666543
No 360
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.60 E-value=3.2e-15 Score=138.49 Aligned_cols=118 Identities=27% Similarity=0.401 Sum_probs=56.5
Q ss_pred ecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCccc
Q 041491 3 SLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQ 82 (467)
Q Consensus 3 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~ 82 (467)
+|++|.++.+. .+..+++|+.|++++|.++ .+| .+..+++|+.|+|++|++++..+ +.++++|+.|+|++|+++
T Consensus 25 ~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~ 98 (263)
T 1xeu_A 25 NLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLK 98 (263)
T ss_dssp HHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCS
T ss_pred HhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccC
Confidence 34455555432 3444555555555555554 233 34555555555555555553322 555555555555555555
Q ss_pred CCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 83 GPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 83 ~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+ +|. +.. ++|+.|+|++|.+++. + .+..+++|+.|++++|++++
T Consensus 99 ~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 99 N-LNG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp C-CTT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCB
T ss_pred C-cCc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCC
Confidence 3 222 111 4555555555555532 1 34455555555555555543
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.60 E-value=1.8e-15 Score=142.43 Aligned_cols=121 Identities=27% Similarity=0.421 Sum_probs=102.9
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|+++++.+ +.++++|++|+|++|.+++ +| .+..+++|+.|+|++|++++. ..+..+++|+.|++++|+
T Consensus 72 ~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~ 145 (291)
T 1h6t_A 72 KLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNK 145 (291)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSC
T ss_pred EEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCc
Confidence 37899999998655 8899999999999999984 44 488999999999999999853 468889999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+++. ..+..+++|+.|++++|.+++..| +..+++|+.|++++|.+++
T Consensus 146 l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 146 ITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 9864 578889999999999999987655 8888999999999998876
No 362
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.59 E-value=4e-15 Score=143.78 Aligned_cols=131 Identities=16% Similarity=0.076 Sum_probs=101.2
Q ss_pred eecCCC-cccccCCcCccCCCCccEEEcCC-CcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC
Q 041491 2 LSLGSN-ELSSVIPSTFWNLNSILSFDFSS-NSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN 79 (467)
Q Consensus 2 L~l~~n-~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N 79 (467)
++++++ +|++ +|. |..+++|+.|+|++ |.|++..+..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 577777 8887 556 88899999999996 9998777788999999999999999999888888999999999999999
Q ss_pred cccCCCCccccCCCCCCEEEccCCccCCccc-ccccccccccccccccccccCCCCC
Q 041491 80 RLQGPIPESFGELTSLESLDLSVNNLSGVIP-ISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 80 ~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
+|++..+..|..++ |+.|+|++|.+..... ..|..+.......+..+.++|..|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 99977666776666 9999999999885433 2333333333444555666665554
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.58 E-value=4.3e-15 Score=153.36 Aligned_cols=120 Identities=25% Similarity=0.360 Sum_probs=52.2
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|.|+.+ | .|..+++|+.|+|++|+|++..| +..+++|+.|+|++|++++ +| .+..+++|+.|+|++|+|
T Consensus 48 L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l 121 (605)
T 1m9s_A 48 IIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGI 121 (605)
T ss_dssp CBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCC
T ss_pred EECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCC
Confidence 34445554432 2 24445555555555555443222 4444444444444444442 22 344444444444444444
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++. +.+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|.|++
T Consensus 122 ~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 122 SDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 431 2244444444444444444432 233444444444444444443
No 364
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.58 E-value=2.3e-15 Score=145.36 Aligned_cols=125 Identities=22% Similarity=0.316 Sum_probs=107.5
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|++++|++++..+ +..+++|+.|+|++|.+++ .+. +..+++|++|++++|++++. ..+..+++|+.|++++|++
T Consensus 204 L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l 277 (347)
T 4fmz_A 204 FTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQI 277 (347)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred eecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCcc
Confidence 6888999997655 8889999999999999985 443 88999999999999999853 4688899999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++. +.+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..|
T Consensus 278 ~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 278 SDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 864 458889999999999999998888889999999999999999987655
No 365
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=6.8e-18 Score=149.66 Aligned_cols=129 Identities=23% Similarity=0.279 Sum_probs=115.1
Q ss_pred eecCCCcccccCCc------CccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEe
Q 041491 2 LSLGSNELSSVIPS------TFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLS 75 (467)
Q Consensus 2 L~l~~n~l~~~~p~------~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~ 75 (467)
++|+.|.+++..|. .|..+++|++|+|++|.+++ +| .+.++++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 23 l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~ 99 (198)
T 1ds9_A 23 TEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELW 99 (198)
T ss_dssp TTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEE
T ss_pred cchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEE
Confidence 57888899888777 89999999999999999986 77 8999999999999999998 7788888889999999
Q ss_pred ccCCcccCCCCccccCCCCCCEEEccCCccCCccc-ccccccccccccccccccccCCCCC
Q 041491 76 LENNRLQGPIPESFGELTSLESLDLSVNNLSGVIP-ISLEKLVYLKDLNLSFNRLKGDIPT 135 (467)
Q Consensus 76 l~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~~~~~~ 135 (467)
|++|++++ +| .+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|++++.+|.
T Consensus 100 L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 100 ISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp EEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 99999996 45 68899999999999999996544 5788999999999999999887554
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.57 E-value=9.1e-15 Score=150.88 Aligned_cols=120 Identities=28% Similarity=0.447 Sum_probs=86.7
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+|+++.| |..+++|+.|+|++|.|++ +| .+..+++|+.|+|++|++++ + ..+..|++|+.|+|++|+|
T Consensus 70 L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l 143 (605)
T 1m9s_A 70 LFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKI 143 (605)
T ss_dssp EECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCC
T ss_pred EEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCcc
Confidence 6778888887554 7777888888888887764 33 57777777777777777774 2 3477777777777777777
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++. ..+..+++|+.|+|++|.|++.+| +..+++|+.|+|++|+|++
T Consensus 144 ~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 144 TDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 754 457777777777777777776655 6677777777777777765
No 367
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=5.3e-15 Score=128.30 Aligned_cols=113 Identities=19% Similarity=0.108 Sum_probs=98.1
Q ss_pred CcCccCCCCccEEEcCCCcccCCCCcCccCCC-CccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCccccCC
Q 041491 14 PSTFWNLNSILSFDFSSNSLNGSLPLDIENMK-VVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGEL 92 (467)
Q Consensus 14 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~ 92 (467)
...+.++.+|++|+|++|+++. +|. +..+. +|+.|+|++|++++. ..+..+++|+.|+|++|+|++..|..|..+
T Consensus 12 ~~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 87 (176)
T 1a9n_A 12 AAQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQAL 87 (176)
T ss_dssp SCEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHC
T ss_pred HHhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcC
Confidence 3557789999999999999984 564 55555 999999999999965 689999999999999999997655666999
Q ss_pred CCCCEEEccCCccCCcccc--cccccccccccccccccccC
Q 041491 93 TSLESLDLSVNNLSGVIPI--SLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 93 ~~L~~L~l~~N~l~~~~~~--~~~~l~~L~~l~l~~N~l~~ 131 (467)
++|+.|++++|.++. +|. .+..+++|+.|++++|+++.
T Consensus 88 ~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~ 127 (176)
T 1a9n_A 88 PDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTN 127 (176)
T ss_dssp TTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGG
T ss_pred CCCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCC
Confidence 999999999999975 455 88999999999999999974
No 368
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=2.2e-15 Score=143.64 Aligned_cols=126 Identities=17% Similarity=0.165 Sum_probs=97.3
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCc-cCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDI-ENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
|+|++|+++++.|..|..+++|++|+|++|.+++..+..+ ..+++|++|+|++|++++. |. ...+++|++|+|++|+
T Consensus 125 L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~ 202 (317)
T 3o53_A 125 IYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNK 202 (317)
T ss_dssp EECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSC
T ss_pred EECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCc
Confidence 6788888888777788888888888888888887666666 3678888888888888744 32 3347888888888888
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+++ +|..+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|++.|
T Consensus 203 l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 203 LAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp CCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBH
T ss_pred CCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccC
Confidence 885 44457788888888888888884 56677788888888888888874
No 369
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.55 E-value=7.7e-15 Score=141.79 Aligned_cols=108 Identities=23% Similarity=0.271 Sum_probs=98.7
Q ss_pred cEEEcCCC-cccCCCCcCccCCCCccEEEccC-CcCCCCCCCCcCCCCCCCEEeccCCcccCCCCccccCCCCCCEEEcc
Q 041491 24 LSFDFSSN-SLNGSLPLDIENMKVVVEINLSR-NYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLS 101 (467)
Q Consensus 24 ~~L~l~~N-~l~~~~~~~~~~l~~L~~l~l~~-n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~ 101 (467)
..+++++| .|+ .+|. +..+++|+.|+|++ |+|++..+..|.+|++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45799998 898 5888 99999999999996 99998878899999999999999999999999999999999999999
Q ss_pred CCccCCcccccccccccccccccccccccCCCC
Q 041491 102 VNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 102 ~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
+|+|++.++..+..++ |+.|+|++|+|.|++.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 9999988777777766 9999999999998765
No 370
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.54 E-value=1.2e-14 Score=140.47 Aligned_cols=123 Identities=26% Similarity=0.401 Sum_probs=101.2
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+++++.+ +..+++|+.|++++|.+.+..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++
T Consensus 182 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 255 (347)
T 4fmz_A 182 LSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQI 255 (347)
T ss_dssp EECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCcc
Confidence 7888999887544 8889999999999999885444 8888999999999999985433 88899999999999998
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++. +.+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..+
T Consensus 256 ~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~ 304 (347)
T 4fmz_A 256 SDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDM 304 (347)
T ss_dssp CCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGH
T ss_pred CCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcCh
Confidence 863 4688889999999999999865 457888899999999998876544
No 371
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.53 E-value=1.7e-14 Score=145.09 Aligned_cols=123 Identities=27% Similarity=0.418 Sum_probs=88.7
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|++++..| +..+++|++|+|++|.+++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++
T Consensus 248 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l 321 (466)
T 1o6v_A 248 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 321 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCC
T ss_pred EECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcC
Confidence 6778888887544 7778888888888888775433 7777778888888887775433 67777777777777777
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~ 134 (467)
++..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..|
T Consensus 322 ~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 322 SDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp SCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred CCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch
Confidence 76544 66777777777777777754 356677777777777777776554
No 372
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.53 E-value=2.1e-14 Score=144.48 Aligned_cols=121 Identities=29% Similarity=0.481 Sum_probs=103.2
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+++++ +.+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++
T Consensus 226 L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l 299 (466)
T 1o6v_A 226 LSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL 299 (466)
T ss_dssp EECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCC
T ss_pred EECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcc
Confidence 78899999874 468889999999999999986544 8889999999999999986544 88899999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGD 132 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 132 (467)
++..| +..+++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 300 ~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 300 EDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp SCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 87544 8889999999999999998766 77889999999999998875
No 373
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.53 E-value=1.5e-14 Score=147.68 Aligned_cols=89 Identities=38% Similarity=0.468 Sum_probs=46.2
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+|++ +|. |.+ +|+.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCC
Confidence 5566666665 333 443 56666666666654 443 34555555555555553 333 344555555555555
Q ss_pred cCCCCccccCCCCCCEEEccCCccC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLS 106 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~ 106 (467)
++ +|. |. ++|+.|+|++|.|+
T Consensus 173 ~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 173 TF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp SC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CC-cch-hh--CCCCEEECcCCCCC
Confidence 54 333 33 45555555555555
No 374
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.50 E-value=1e-13 Score=128.26 Aligned_cols=145 Identities=14% Similarity=0.101 Sum_probs=115.1
Q ss_pred HHhccCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCC-CCCceeEEEEeecCCeeeEEE
Q 041491 215 LATDHFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 215 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 293 (467)
..-++|++....+.|+.+.||++.. +++.+++|+...........+.+|+.+++.+. +..++++++++...+..|+||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 3446788888899999999999975 47899999987543233456889999999884 678889999999889999999
Q ss_pred ecccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 041491 294 EYMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG--------------------------------------- 334 (467)
Q Consensus 294 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~--------------------------------------- 334 (467)
||++|.++.+... +......++.+++++++.||.-
T Consensus 90 e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 90 SEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp ECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 9999999987631 1122346889999999999940
Q ss_pred -----------------CCCCceecCCCCCCeeecCCCcEEEeccccce
Q 041491 335 -----------------YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366 (467)
Q Consensus 335 -----------------~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 366 (467)
....++|+|++|.||+++++..+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876566799999875
No 375
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.48 E-value=1.3e-13 Score=140.75 Aligned_cols=111 Identities=29% Similarity=0.379 Sum_probs=66.4
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+|++ +|..+ +++|+.|+|++|.|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|+.|+|++|+|
T Consensus 64 L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l 132 (571)
T 3cvr_A 64 LQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQL 132 (571)
T ss_dssp EECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCC
T ss_pred EEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcC
Confidence 5677777776 44434 256777777777766 455 345666667777766664 454 443 666666666666
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|++++|+|++
T Consensus 133 ~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 133 TM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp SC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC
Confidence 65 443 45566666666666664 333 34556666666666554
No 376
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.48 E-value=4.2e-14 Score=136.71 Aligned_cols=121 Identities=17% Similarity=0.152 Sum_probs=64.7
Q ss_pred ecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCC-CCcCCCCCCCE-EeccCCc
Q 041491 3 SLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIP-PTIGGLTNLQL-LSLENNR 80 (467)
Q Consensus 3 ~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~-~~~~~l~~L~~-l~l~~N~ 80 (467)
+.++|+++. +|..+ .+++++|+|++|+|+...+++|.++++|++|+|++|++.+.+| ..|.++++|.. +.+++|+
T Consensus 15 ~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~ 91 (350)
T 4ay9_X 15 LCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANN 91 (350)
T ss_dssp EEESTTCCS-CCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETT
T ss_pred EecCCCCCc-cCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCc
Confidence 445555554 33333 2455666666666654333455666666666666666544333 34555555543 3444556
Q ss_pred ccCCCCccccCCCCCCEEEccCCccCCccccccccccccccccccc
Q 041491 81 LQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSF 126 (467)
Q Consensus 81 l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 126 (467)
|++..|..|..+++|+.|++++|.+++.++..+....++..+++.+
T Consensus 92 l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~ 137 (350)
T 4ay9_X 92 LLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD 137 (350)
T ss_dssp CCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEES
T ss_pred ccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcc
Confidence 6555555566666666666666666555444444444555555543
No 377
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=3.5e-16 Score=138.59 Aligned_cols=124 Identities=21% Similarity=0.263 Sum_probs=107.9
Q ss_pred CeecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc
Q 041491 1 NLSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR 80 (467)
Q Consensus 1 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~ 80 (467)
.|+|++|++++ +| .|.++++|++|+|++|.++ .+|..+..+++|+.|+|++|++++ +| .+..+++|+.|+|++|+
T Consensus 52 ~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~ 126 (198)
T 1ds9_A 52 HLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNK 126 (198)
T ss_dssp EEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEE
T ss_pred EEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCc
Confidence 37899999998 56 8999999999999999998 688888888999999999999995 45 68899999999999999
Q ss_pred ccCCCC-ccccCCCCCCEEEccCCccCCccccc----------ccccccccccccccccccC
Q 041491 81 LQGPIP-ESFGELTSLESLDLSVNNLSGVIPIS----------LEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 81 l~~~~p-~~~~~~~~L~~L~l~~N~l~~~~~~~----------~~~l~~L~~l~l~~N~l~~ 131 (467)
+++..+ ..+..+++|+.|++++|.+++.+|.. +..+++|+.|| +|+++.
T Consensus 127 i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 127 ITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp CCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred CCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 996433 47899999999999999998776653 78889999886 777753
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.45 E-value=1.9e-13 Score=136.87 Aligned_cols=122 Identities=24% Similarity=0.252 Sum_probs=95.1
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+..+.. .+..+++|+.|+|++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++
T Consensus 153 L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l 224 (457)
T 3bz5_A 153 LDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKL 224 (457)
T ss_dssp EECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCC
T ss_pred EECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcc
Confidence 678888555444 47888999999999999885 55 78888899999999998854 388888999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCccCCcccccccccc-------cccccccccccccCCCC
Q 041491 82 QGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLV-------YLKDLNLSFNRLKGDIP 134 (467)
Q Consensus 82 ~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~-------~L~~l~l~~N~l~~~~~ 134 (467)
++ +| +..+++|+.|++++|++++.++..+..+. +|+.|++++|++.+.+|
T Consensus 225 ~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 225 TE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred cc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 87 55 78888999999999999887666655554 45667777776666555
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.44 E-value=6.4e-13 Score=132.98 Aligned_cols=119 Identities=19% Similarity=0.212 Sum_probs=65.1
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
|+|++|+++++ | +..+++|++|+|++|++++. + +..+++|++|++++|+..+.+ .+..+++|+.|++++|++
T Consensus 111 L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 111 LNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp EECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcc
Confidence 67777877764 3 77777777777777777753 2 555555555555555333333 244445555555555555
Q ss_pred cCCCC-------------------ccccCCCCCCEEEccCCccCCcccccccccccccccccccccccCC
Q 041491 82 QGPIP-------------------ESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGD 132 (467)
Q Consensus 82 ~~~~p-------------------~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 132 (467)
++ +| ..++.+++|+.|++++|++++ +| +..+++|+.|++++|++++.
T Consensus 183 ~~-l~l~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 183 TE-LDVSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CC-CCCTTCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred ce-eccccCCCCCEEECcCCcCCeeccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 43 22 024445555555555555554 23 44455555555555555543
No 380
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.42 E-value=9.2e-15 Score=142.08 Aligned_cols=130 Identities=22% Similarity=0.185 Sum_probs=103.4
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCC----cCccCCC-CccEEEccCCcCCCCCCCCcCCC-----CCC
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLP----LDIENMK-VVVEINLSRNYLTGDIPPTIGGL-----TNL 71 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~l~-~L~~l~l~~n~l~~~~~~~~~~l-----~~L 71 (467)
+.|++|++++..|..+...++|++|+|++|.|++..+ ..|..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5788999998888877777779999999999986655 6778888 89999999999987767666664 889
Q ss_pred CEEeccCCcccCCCCcc----ccCC-CCCCEEEccCCccCCcccccccc-----cccccccccccccccC
Q 041491 72 QLLSLENNRLQGPIPES----FGEL-TSLESLDLSVNNLSGVIPISLEK-----LVYLKDLNLSFNRLKG 131 (467)
Q Consensus 72 ~~l~l~~N~l~~~~p~~----~~~~-~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~l~l~~N~l~~ 131 (467)
++|+|++|++++..+.. +..+ ++|+.|+|++|.+++..+..+.. .++|+.|++++|.+++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 99999999998766654 3444 78999999999998776655443 2588999999998874
No 381
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.42 E-value=4.5e-15 Score=145.65 Aligned_cols=130 Identities=21% Similarity=0.298 Sum_probs=77.4
Q ss_pred eecCCCcccc----cCCcCccCC---------CCccEEEcCCCccc-CCCC---cCccCCCCccEEEccCCcCC--C---
Q 041491 2 LSLGSNELSS----VIPSTFWNL---------NSILSFDFSSNSLN-GSLP---LDIENMKVVVEINLSRNYLT--G--- 59 (467)
Q Consensus 2 L~l~~n~l~~----~~p~~~~~l---------~~L~~L~l~~N~l~-~~~~---~~~~~l~~L~~l~l~~n~l~--~--- 59 (467)
|+|++|.|+. .++..+..+ ++|++|+|++|+++ +..| ..+..+++|+.|+|++|+++ |
T Consensus 127 L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~ 206 (386)
T 2ca6_A 127 LYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEH 206 (386)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHH
T ss_pred EECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHH
Confidence 5666666652 234445555 66667777776665 2333 34556666666777666665 2
Q ss_pred CCCCCcCCCCCCCEEeccCCccc----CCCCccccCCCCCCEEEccCCccCCc----ccccccc--cccccccccccccc
Q 041491 60 DIPPTIGGLTNLQLLSLENNRLQ----GPIPESFGELTSLESLDLSVNNLSGV----IPISLEK--LVYLKDLNLSFNRL 129 (467)
Q Consensus 60 ~~~~~~~~l~~L~~l~l~~N~l~----~~~p~~~~~~~~L~~L~l~~N~l~~~----~~~~~~~--l~~L~~l~l~~N~l 129 (467)
..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++|.+++. ++..+.. +++|+.|+|++|.+
T Consensus 207 l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i 286 (386)
T 2ca6_A 207 LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEI 286 (386)
T ss_dssp HHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCC
T ss_pred HHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcC
Confidence 23335666666666677666664 34555666666666666666666644 3444422 56666666666666
Q ss_pred cC
Q 041491 130 KG 131 (467)
Q Consensus 130 ~~ 131 (467)
++
T Consensus 287 ~~ 288 (386)
T 2ca6_A 287 EL 288 (386)
T ss_dssp BH
T ss_pred CH
Confidence 65
No 382
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.40 E-value=1.4e-14 Score=140.89 Aligned_cols=133 Identities=26% Similarity=0.303 Sum_probs=107.7
Q ss_pred CeecCCCcccccCC----cCccCCC-CccEEEcCCCcccCCCCcCccCC-----CCccEEEccCCcCCCCCCCCc----C
Q 041491 1 NLSLGSNELSSVIP----STFWNLN-SILSFDFSSNSLNGSLPLDIENM-----KVVVEINLSRNYLTGDIPPTI----G 66 (467)
Q Consensus 1 ~L~l~~n~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l-----~~L~~l~l~~n~l~~~~~~~~----~ 66 (467)
.|+|++|+|+...+ ..|..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|++++..+..+ .
T Consensus 26 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 105 (362)
T 3goz_A 26 SLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLA 105 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHH
T ss_pred EEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHH
Confidence 37999999998777 7888898 99999999999997777777765 999999999999987666644 4
Q ss_pred CC-CCCCEEeccCCcccCCCCccc----cC-CCCCCEEEccCCccCCcccc----cccccc-cccccccccccccCCC
Q 041491 67 GL-TNLQLLSLENNRLQGPIPESF----GE-LTSLESLDLSVNNLSGVIPI----SLEKLV-YLKDLNLSFNRLKGDI 133 (467)
Q Consensus 67 ~l-~~L~~l~l~~N~l~~~~p~~~----~~-~~~L~~L~l~~N~l~~~~~~----~~~~l~-~L~~l~l~~N~l~~~~ 133 (467)
.+ ++|+.|+|++|++++..+..+ .. .++|+.|+|++|.+++..+. .+..++ +|+.|++++|++++..
T Consensus 106 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~ 183 (362)
T 3goz_A 106 AIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKN 183 (362)
T ss_dssp TSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSC
T ss_pred hCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhh
Confidence 44 899999999999997666544 33 46999999999999854433 344555 8999999999998644
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.40 E-value=1.3e-12 Score=130.63 Aligned_cols=78 Identities=24% Similarity=0.411 Sum_probs=37.2
Q ss_pred CCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCccccCCCCCCEEEc
Q 041491 21 NSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDL 100 (467)
Q Consensus 21 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l 100 (467)
++|++|+|++|++++ +| .|.++++|++|++++|++++ +|..+ ++|++|++++|++++ +| .++.+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 345555555555553 44 35555555555555555542 33322 244555555555543 33 3444444444444
Q ss_pred cCCccC
Q 041491 101 SVNNLS 106 (467)
Q Consensus 101 ~~N~l~ 106 (467)
++|.++
T Consensus 203 ~~N~l~ 208 (454)
T 1jl5_A 203 DNNSLK 208 (454)
T ss_dssp CSSCCS
T ss_pred CCCcCC
Confidence 444444
No 384
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.39 E-value=8.7e-13 Score=136.34 Aligned_cols=81 Identities=31% Similarity=0.300 Sum_probs=49.3
Q ss_pred CCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCccccCCCCCCEEEccCCccCCccccccccccccccccc
Q 041491 45 KVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNL 124 (467)
Q Consensus 45 ~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 124 (467)
++|+.|+|++|++++ +| ..+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+ .+|..+..+++|+.|++
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 445555666665553 33 334566666666666663 443 4566777777777776 44666667777777777
Q ss_pred ccccccCCCC
Q 041491 125 SFNRLKGDIP 134 (467)
Q Consensus 125 ~~N~l~~~~~ 134 (467)
++|++++..+
T Consensus 292 ~~N~l~~~~~ 301 (622)
T 3g06_A 292 EGNPLSERTL 301 (622)
T ss_dssp CSCCCCHHHH
T ss_pred cCCCCCCcCH
Confidence 7777665443
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.39 E-value=2.4e-14 Score=137.54 Aligned_cols=125 Identities=16% Similarity=0.205 Sum_probs=63.9
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCC-CCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCC-
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGS-LPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENN- 79 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N- 79 (467)
|+|++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|++++..+..++.+++|++|+|++|
T Consensus 75 L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~ 153 (336)
T 2ast_B 75 FRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 153 (336)
T ss_dssp EECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCB
T ss_pred EEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCC
Confidence 44555555544333 33455555555555555433 4444555555555555555555444555555555555555555
Q ss_pred cccC-CCCccccCCCCCCEEEccCC-ccCCc-ccccccccc-cccccccccc
Q 041491 80 RLQG-PIPESFGELTSLESLDLSVN-NLSGV-IPISLEKLV-YLKDLNLSFN 127 (467)
Q Consensus 80 ~l~~-~~p~~~~~~~~L~~L~l~~N-~l~~~-~~~~~~~l~-~L~~l~l~~N 127 (467)
.+++ .++..+..+++|+.|++++| .+++. ++..+..++ +|+.|++++|
T Consensus 154 ~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 154 GFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp SCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred CCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 3443 13344455555555555555 55432 344445555 5555555555
No 386
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.39 E-value=6.8e-15 Score=141.40 Aligned_cols=131 Identities=16% Similarity=0.214 Sum_probs=102.7
Q ss_pred eecCCCccccc-CCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCC-cCCCC-CCCCcCCCCCCCEEeccC
Q 041491 2 LSLGSNELSSV-IPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRN-YLTGD-IPPTIGGLTNLQLLSLEN 78 (467)
Q Consensus 2 L~l~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n-~l~~~-~~~~~~~l~~L~~l~l~~ 78 (467)
|+|++|.++.. .|..+..+++|++|+|++|.+++..+..+..+++|++|+|++| .+++. ++..+.++++|++|++++
T Consensus 98 L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~ 177 (336)
T 2ast_B 98 MDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSW 177 (336)
T ss_dssp EECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCC
T ss_pred EEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCC
Confidence 78888888865 6777888889999999999888777778888888999999888 57642 566677888888888888
Q ss_pred C-cccCC-CCccccCCC-CCCEEEccCC--ccC-Cccccccccccccccccccccc-ccCC
Q 041491 79 N-RLQGP-IPESFGELT-SLESLDLSVN--NLS-GVIPISLEKLVYLKDLNLSFNR-LKGD 132 (467)
Q Consensus 79 N-~l~~~-~p~~~~~~~-~L~~L~l~~N--~l~-~~~~~~~~~l~~L~~l~l~~N~-l~~~ 132 (467)
| .+++. ++..+..++ +|+.|++++| .++ +.+|..+..+++|+.|++++|. +++.
T Consensus 178 ~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 238 (336)
T 2ast_B 178 CFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKND 238 (336)
T ss_dssp CTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGG
T ss_pred CCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHH
Confidence 8 88753 466677888 8888888888 454 4456677788888888888888 5543
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.37 E-value=8.7e-15 Score=143.55 Aligned_cols=129 Identities=19% Similarity=0.245 Sum_probs=88.0
Q ss_pred eecCCC---cccccCCcCc-------cCCCCccEEEcCCCcccC----CCCcCccCCCCccEEEccCCcCCCCCCCCc--
Q 041491 2 LSLGSN---ELSSVIPSTF-------WNLNSILSFDFSSNSLNG----SLPLDIENMKVVVEINLSRNYLTGDIPPTI-- 65 (467)
Q Consensus 2 L~l~~n---~l~~~~p~~~-------~~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~-- 65 (467)
|+|++| ++++..|..+ ..+++|++|+|++|.++. .+|..+..+++|+.|+|++|.+++..+..+
T Consensus 65 L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~ 144 (386)
T 2ca6_A 65 AEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR 144 (386)
T ss_dssp EECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred EeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHH
Confidence 677774 4444445444 677888888888888875 366677778888888888888763333333
Q ss_pred --CCC---------CCCCEEeccCCccc-CCCC---ccccCCCCCCEEEccCCccC--C---cccccccccccccccccc
Q 041491 66 --GGL---------TNLQLLSLENNRLQ-GPIP---ESFGELTSLESLDLSVNNLS--G---VIPISLEKLVYLKDLNLS 125 (467)
Q Consensus 66 --~~l---------~~L~~l~l~~N~l~-~~~p---~~~~~~~~L~~L~l~~N~l~--~---~~~~~~~~l~~L~~l~l~ 125 (467)
..+ ++|++|+|++|+++ +..| ..+..+++|+.|+|++|.++ | ..|..+..+++|+.|+|+
T Consensus 145 ~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls 224 (386)
T 2ca6_A 145 ALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQ 224 (386)
T ss_dssp HHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECC
T ss_pred HHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECc
Confidence 333 77888888888876 3344 35667777888888888776 2 334466777778888888
Q ss_pred ccccc
Q 041491 126 FNRLK 130 (467)
Q Consensus 126 ~N~l~ 130 (467)
+|.++
T Consensus 225 ~n~l~ 229 (386)
T 2ca6_A 225 DNTFT 229 (386)
T ss_dssp SSCCH
T ss_pred CCCCC
Confidence 88775
No 388
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.36 E-value=1.6e-12 Score=130.01 Aligned_cols=54 Identities=33% Similarity=0.471 Sum_probs=28.8
Q ss_pred CCCEEeccCCcccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 70 NLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 70 ~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+|+.|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|+.|++++|++++
T Consensus 318 ~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 318 SLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS
T ss_pred cCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCc
Confidence 55556666665554 3332 3555666666666553 233 24555556666665555
No 389
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.36 E-value=1.4e-12 Score=120.28 Aligned_cols=136 Identities=15% Similarity=0.061 Sum_probs=101.4
Q ss_pred cCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCC--ceeEEEEeecCCeeeEEEecc
Q 041491 219 HFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN--LVKIISSCSNGNFEALVLEYM 296 (467)
Q Consensus 219 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~ 296 (467)
+|.+....+.|..+.||++...+|..+++|+.... ....+.+|+.+++.+.+.+ +++++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 44443333466679999998767888999997543 2356789999999885433 667999888888889999999
Q ss_pred cCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 041491 297 ANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY----------------------------------------- 335 (467)
Q Consensus 297 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~----------------------------------------- 335 (467)
+|.++. ... .+ ...++.++++.+..||...
T Consensus 98 ~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998884 211 12 2357788888888888311
Q ss_pred --------------CCCceecCCCCCCeeecCCCcEEEeccccce
Q 041491 336 --------------SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366 (467)
Q Consensus 336 --------------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 366 (467)
...++|+|++|.||++++++.+.|+|||.+.
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887667799999976
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.35 E-value=7.1e-13 Score=128.07 Aligned_cols=132 Identities=21% Similarity=0.133 Sum_probs=87.2
Q ss_pred eecCCCccccc-CCcCccCCCCccE-EEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCC----------------
Q 041491 2 LSLGSNELSSV-IPSTFWNLNSILS-FDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPP---------------- 63 (467)
Q Consensus 2 L~l~~n~l~~~-~p~~~~~l~~L~~-L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~---------------- 63 (467)
|+|++|++.+. .+..|.++++|++ +++++|+|+...|+.|.++++|+.|++++|++++..+.
T Consensus 59 L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~ 138 (350)
T 4ay9_X 59 IEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN 138 (350)
T ss_dssp EEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC
T ss_pred EECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc
Confidence 67777776543 3456777776654 55566777766667777777777777777776643332
Q ss_pred ---------CcCCCC-CCCEEeccCCcccCCCCccccCCCCCCEEEcc-CCccCCcccccccccccccccccccccccCC
Q 041491 64 ---------TIGGLT-NLQLLSLENNRLQGPIPESFGELTSLESLDLS-VNNLSGVIPISLEKLVYLKDLNLSFNRLKGD 132 (467)
Q Consensus 64 ---------~~~~l~-~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~-~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 132 (467)
.|..+. .++.|+|++|+|+.. |.......+|+.|+++ +|.++.++++.|..+++|+.|++++|+|+.-
T Consensus 139 ~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 139 INIHTIERNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp TTCCEECTTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred cccccccccchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 233333 467778888888754 4333355678888886 4666655556778888888888888888754
Q ss_pred CC
Q 041491 133 IP 134 (467)
Q Consensus 133 ~~ 134 (467)
++
T Consensus 218 p~ 219 (350)
T 4ay9_X 218 PS 219 (350)
T ss_dssp CS
T ss_pred Ch
Confidence 33
No 391
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.30 E-value=9.1e-12 Score=128.71 Aligned_cols=14 Identities=36% Similarity=0.515 Sum_probs=6.7
Q ss_pred CCCCEEEccCCccC
Q 041491 93 TSLESLDLSVNNLS 106 (467)
Q Consensus 93 ~~L~~L~l~~N~l~ 106 (467)
++|+.|+|++|.++
T Consensus 141 ~~L~~L~Ls~N~l~ 154 (622)
T 3g06_A 141 PGLQELSVSDNQLA 154 (622)
T ss_dssp TTCCEEECCSSCCS
T ss_pred CCCCEEECcCCcCC
Confidence 44444444444444
No 392
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.24 E-value=3e-11 Score=117.09 Aligned_cols=141 Identities=13% Similarity=0.146 Sum_probs=107.0
Q ss_pred CCccCcccceeEEEEEecCCCeEEEEEee--ccc-ccchHHHHHHHHHHHcCC--CCCceeEEEEeecC---CeeeEEEe
Q 041491 223 KSLIGIGSFGTVYKGRFLDGMEVAIKVFH--LQF-DGALKSFDAECEVLKSVR--HRNLVKIISSCSNG---NFEALVLE 294 (467)
Q Consensus 223 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~e 294 (467)
.+.++.|.++.||+.... +..+++|+.. ... ......+.+|..+++.+. +..+++++.++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 567899999999999874 4688888765 321 122457889999999886 45688999988776 45899999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY--------------------------------------- 335 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 335 (467)
|++|..+.+.. ...++..+...++.++++.|+.||...
T Consensus 122 ~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 122 FVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp CCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred ecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 99998875421 124678888899999999999999410
Q ss_pred ----------------CCCceecCCCCCCeeecCCCc--EEEecccccee
Q 041491 336 ----------------SNPVVHCDIKPSNVLLDDDMV--AHLSDFGIAKL 367 (467)
Q Consensus 336 ----------------~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~a~~ 367 (467)
...++|+|++|.||++++++. +.|+||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999999875
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.23 E-value=7.2e-14 Score=140.25 Aligned_cols=130 Identities=18% Similarity=0.140 Sum_probs=86.3
Q ss_pred eecCCCcccccC-----CcCccCCCCccEEEcCCCcccCC----CCcCccCCCCccEEEccCCcCCCCCCCCcC-----C
Q 041491 2 LSLGSNELSSVI-----PSTFWNLNSILSFDFSSNSLNGS----LPLDIENMKVVVEINLSRNYLTGDIPPTIG-----G 67 (467)
Q Consensus 2 L~l~~n~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~-----~ 67 (467)
|+|++|+++... +..+..+++|++|+|++|.++.. ++..+..+++|++|+|++|.+++..+..+. .
T Consensus 232 L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~ 311 (461)
T 1z7x_W 232 LALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEP 311 (461)
T ss_dssp EECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTST
T ss_pred EeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccC
Confidence 678888877532 33344578888888888888743 566677778888888888877643222222 2
Q ss_pred CCCCCEEeccCCcccCC----CCccccCCCCCCEEEccCCccCCcccccccc-----cccccccccccccccC
Q 041491 68 LTNLQLLSLENNRLQGP----IPESFGELTSLESLDLSVNNLSGVIPISLEK-----LVYLKDLNLSFNRLKG 131 (467)
Q Consensus 68 l~~L~~l~l~~N~l~~~----~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~l~l~~N~l~~ 131 (467)
.++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++..+..+.. .++|+.|++++|.+++
T Consensus 312 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 312 GCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred CccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 35777888888777754 3455666777777777777776554444433 4577777777777764
No 394
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.21 E-value=3.8e-11 Score=114.83 Aligned_cols=127 Identities=14% Similarity=0.155 Sum_probs=95.8
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCcc---------------------------------------
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIE--------------------------------------- 42 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~--------------------------------------- 42 (467)
|+|.+ +++.+.+.+|.++++|+.|+|++|.+....+.+|.
T Consensus 106 l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~ 184 (329)
T 3sb4_A 106 VILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQV 184 (329)
T ss_dssp -CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEE
T ss_pred EECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEe
Confidence 56777 88888888899999999999998876422222221
Q ss_pred ---------------------------------------CCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccC
Q 041491 43 ---------------------------------------NMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQG 83 (467)
Q Consensus 43 ---------------------------------------~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 83 (467)
.+++|+.|+|++|+++...+..|.+|++|+.|+|.+| ++.
T Consensus 185 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~ 263 (329)
T 3sb4_A 185 GAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKT 263 (329)
T ss_dssp CTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCE
T ss_pred cCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cce
Confidence 1567888888888888666667888888888888887 665
Q ss_pred CCCccccCCCCCC-EEEccCCccCCcccccccccccccccccccccccC
Q 041491 84 PIPESFGELTSLE-SLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 84 ~~p~~~~~~~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
..+.+|.+|++|+ .+++.+ .++.+.+..|.+|++|+.+++++|+++.
T Consensus 264 I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~ 311 (329)
T 3sb4_A 264 IGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITT 311 (329)
T ss_dssp ECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCE
T ss_pred ehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCc
Confidence 6667888888888 888887 6766667888888888888888887764
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.13 E-value=9.7e-13 Score=131.97 Aligned_cols=130 Identities=22% Similarity=0.231 Sum_probs=88.8
Q ss_pred eecCCCcccccCCcCc-cCCC----CccEEEcCCCcccC----CCCcCccCCCCccEEEccCCcCCCCCCCCc-----CC
Q 041491 2 LSLGSNELSSVIPSTF-WNLN----SILSFDFSSNSLNG----SLPLDIENMKVVVEINLSRNYLTGDIPPTI-----GG 67 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~-~~l~----~L~~L~l~~N~l~~----~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~-----~~ 67 (467)
|+|++|+++...+..+ ..++ +|++|+|++|.++. .++..+..+++|++|+|++|.+++..+..+ ..
T Consensus 61 L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~ 140 (461)
T 1z7x_W 61 LNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDP 140 (461)
T ss_dssp EECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTST
T ss_pred EeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcC
Confidence 6788888876444333 2344 68888888888873 457778888888888888888764333222 23
Q ss_pred CCCCCEEeccCCcccCCC----CccccCCCCCCEEEccCCccCCcccccccc-----cccccccccccccccC
Q 041491 68 LTNLQLLSLENNRLQGPI----PESFGELTSLESLDLSVNNLSGVIPISLEK-----LVYLKDLNLSFNRLKG 131 (467)
Q Consensus 68 l~~L~~l~l~~N~l~~~~----p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~l~l~~N~l~~ 131 (467)
+++|++|+|++|++++.. +..+..+++|+.|++++|.+++..+..+.. .++|+.|++++|.+++
T Consensus 141 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 213 (461)
T 1z7x_W 141 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTS 213 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBT
T ss_pred CCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcH
Confidence 567888888888887532 455666788888888888876554444432 4478888888887765
No 396
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.11 E-value=4.6e-11 Score=112.95 Aligned_cols=184 Identities=15% Similarity=0.134 Sum_probs=124.2
Q ss_pred CCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCC-CC--CceeEEEEeecCC---eeeEEEecc
Q 041491 223 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HR--NLVKIISSCSNGN---FEALVLEYM 296 (467)
Q Consensus 223 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~--niv~~~~~~~~~~---~~~lv~e~~ 296 (467)
.+.++.|.+..||+.. ..+++|+.... .....+.+|.++++.+. +. .+++++......+ ..|+||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 57899985432 33567889999998873 32 2556666654443 458999999
Q ss_pred cCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 041491 297 ANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG------------------------------------------ 334 (467)
Q Consensus 297 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~------------------------------------------ 334 (467)
+|.++.+... ..++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9988865332 2357777888888888888888831
Q ss_pred -------------CCCCceecCCCCCCeeecC--CCcEEEeccccceecCCCCccccccc----ccccccc-----CCCC
Q 041491 335 -------------YSNPVVHCDIKPSNVLLDD--DMVAHLSDFGIAKLLNGKESMRTQTL----ATIEYGR-----EGQV 390 (467)
Q Consensus 335 -------------~~~~ivH~dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~----~~pe~~~-----~~~~ 390 (467)
....++|+|++|.||++++ +..+.++||+.+..-........... ..++... .+..
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 0135799999999999998 45678999999876433211100000 1111100 0111
Q ss_pred ---------CCcccchhhHHHHHHHhcCCCCCCc
Q 041491 391 ---------SPKSDVYGYGITLIETFTKKKPTCE 415 (467)
Q Consensus 391 ---------~~~~Dv~slGvil~el~tg~~Pf~~ 415 (467)
....+.|++|.++|.+.+|..||..
T Consensus 256 ~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 256 DIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 1125899999999999999988743
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.09 E-value=1.4e-12 Score=126.75 Aligned_cols=129 Identities=19% Similarity=0.200 Sum_probs=69.5
Q ss_pred eecCCCcccccCCcCccCC-----CCccEEEcCCCcccCCCCcC-ccCCCCccEEEccCCcCCCCCCCCc-----CCCCC
Q 041491 2 LSLGSNELSSVIPSTFWNL-----NSILSFDFSSNSLNGSLPLD-IENMKVVVEINLSRNYLTGDIPPTI-----GGLTN 70 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~l~l~~n~l~~~~~~~~-----~~l~~ 70 (467)
|+|++|+|+......|..+ ++|++|+|++|.|+..-... ...+++|+.|+|++|+++......+ ...++
T Consensus 77 L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~ 156 (372)
T 3un9_A 77 LNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQ 156 (372)
T ss_dssp EECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCC
T ss_pred EEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCc
Confidence 5677777765433333222 56777777777765322211 2234566666677666653322222 23456
Q ss_pred CCEEeccCCcccC----CCCccccCCCCCCEEEccCCccCCcc----ccccccccccccccccccccc
Q 041491 71 LQLLSLENNRLQG----PIPESFGELTSLESLDLSVNNLSGVI----PISLEKLVYLKDLNLSFNRLK 130 (467)
Q Consensus 71 L~~l~l~~N~l~~----~~p~~~~~~~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~l~l~~N~l~ 130 (467)
|+.|+|++|.|+. .++..+..+++|+.|+|++|.|++.. +..+...++|+.|+|++|.|+
T Consensus 157 L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 157 ITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred cceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 6666666666643 12333455666666666666665322 334445556666666666664
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.09 E-value=1.8e-10 Score=110.07 Aligned_cols=103 Identities=15% Similarity=0.084 Sum_probs=93.6
Q ss_pred CCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCC-EEeccCCcccCCCCccccCCCCCCEE
Q 041491 20 LNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQ-LLSLENNRLQGPIPESFGELTSLESL 98 (467)
Q Consensus 20 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~-~l~l~~N~l~~~~p~~~~~~~~L~~L 98 (467)
+++|+.|+|++|+++.+.+.+|.++++|+.|+|++| ++...+..|.+|++|+ .+++.+ .++...+.+|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 678999999999999777789999999999999998 8867778899999999 999999 7776777899999999999
Q ss_pred EccCCccCCccccccccccccccccc
Q 041491 99 DLSVNNLSGVIPISLEKLVYLKDLNL 124 (467)
Q Consensus 99 ~l~~N~l~~~~~~~~~~l~~L~~l~l 124 (467)
++++|.++.+.+..|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 99999999888889999999998864
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.03 E-value=2.8e-12 Score=124.56 Aligned_cols=130 Identities=22% Similarity=0.219 Sum_probs=93.7
Q ss_pred eecCCCcccccCCcCc-cCCCCccEEEcCCCcccCCCCcCc-----cCCCCccEEEccCCcCCC----CCCCCcCCCCCC
Q 041491 2 LSLGSNELSSVIPSTF-WNLNSILSFDFSSNSLNGSLPLDI-----ENMKVVVEINLSRNYLTG----DIPPTIGGLTNL 71 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~l~l~~n~l~~----~~~~~~~~l~~L 71 (467)
|+|++|.|+......+ ..+++|+.|+|++|.|+..-...+ ...++|++|+|++|.++. .++..+..+++|
T Consensus 106 L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L 185 (372)
T 3un9_A 106 VNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSV 185 (372)
T ss_dssp EECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSC
T ss_pred EEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCc
Confidence 7889998875433333 346788999999998874333333 346789999999998863 244455778889
Q ss_pred CEEeccCCcccCC----CCccccCCCCCCEEEccCCccCCcc----cccccccccccccccccccccC
Q 041491 72 QLLSLENNRLQGP----IPESFGELTSLESLDLSVNNLSGVI----PISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 72 ~~l~l~~N~l~~~----~p~~~~~~~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
++|+|++|+|+.. ++..+..+++|+.|+|++|.|++.. ...+...++|+.|+|++|+|+.
T Consensus 186 ~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 186 THLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 9999999998742 2456677788999999999987532 3344456889999999998864
No 400
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.84 E-value=1.5e-08 Score=96.38 Aligned_cols=138 Identities=16% Similarity=0.183 Sum_probs=102.9
Q ss_pred cCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCC----CCceeEEEEeecCCeeeEEEe
Q 041491 219 HFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH----RNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 219 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e 294 (467)
.....+.++.|....||+. +..+++|+.... .....+.+|.++++.+.+ ..+++++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4555678999999999998 678999976432 223568899999888865 235666665 56689999
Q ss_pred cccCCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 041491 295 YMANGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGY--------------------------------------- 335 (467)
Q Consensus 295 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 335 (467)
|++|.++..... ..++..+...++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 999998864321 23567777788888888888888321
Q ss_pred ---------------------CCCceecCCCCCCeeecCCCcEEEeccccceecC
Q 041491 336 ---------------------SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLN 369 (467)
Q Consensus 336 ---------------------~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~ 369 (467)
...++|+|++|.||+++++..+.|+||+.+..-.
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 1234999999999999986667999999986543
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.80 E-value=1.5e-10 Score=106.05 Aligned_cols=105 Identities=25% Similarity=0.328 Sum_probs=68.1
Q ss_pred ccCCCCccE--EEcCCCccc---CCCCcCccCCCCccEEEccCCcCCC--CCCCCcCCCCCCCEEeccCCcccCCCCccc
Q 041491 17 FWNLNSILS--FDFSSNSLN---GSLPLDIENMKVVVEINLSRNYLTG--DIPPTIGGLTNLQLLSLENNRLQGPIPESF 89 (467)
Q Consensus 17 ~~~l~~L~~--L~l~~N~l~---~~~~~~~~~l~~L~~l~l~~n~l~~--~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~ 89 (467)
|...+.|.. ++++.|+.. ..++-...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455554 666777433 1122222557788888888888886 3445666788888888888888864 334
Q ss_pred cCCC--CCCEEEccCCccCCcccc-------cccccccccccc
Q 041491 90 GELT--SLESLDLSVNNLSGVIPI-------SLEKLVYLKDLN 123 (467)
Q Consensus 90 ~~~~--~L~~L~l~~N~l~~~~~~-------~~~~l~~L~~l~ 123 (467)
..+. +|+.|+|++|.+.+..|. .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 788888888888765552 356677777665
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.79 E-value=7.3e-10 Score=101.38 Aligned_cols=96 Identities=22% Similarity=0.255 Sum_probs=73.3
Q ss_pred eecCCCccc---ccCCcCccCCCCccEEEcCCCcccC--CCCcCccCCCCccEEEccCCcCCCCCCCCcCCCC--CCCEE
Q 041491 2 LSLGSNELS---SVIPSTFWNLNSILSFDFSSNSLNG--SLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLT--NLQLL 74 (467)
Q Consensus 2 L~l~~n~l~---~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~--~L~~l 74 (467)
++++.|+.. ...+-...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 456666433 2222233568999999999999997 3456778999999999999999965 3344444 99999
Q ss_pred eccCCcccCCCCc-------cccCCCCCCEEE
Q 041491 75 SLENNRLQGPIPE-------SFGELTSLESLD 99 (467)
Q Consensus 75 ~l~~N~l~~~~p~-------~~~~~~~L~~L~ 99 (467)
+|++|.+.+..|. .+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9999999986663 477899999887
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.78 E-value=8.8e-11 Score=121.55 Aligned_cols=129 Identities=15% Similarity=0.070 Sum_probs=65.8
Q ss_pred ecCCCcccccCCcCccC-CCCccEEEcC----CCcccCC-----CCcCccCCCCccEEEccCCc--CCCCCCCCcC-CCC
Q 041491 3 SLGSNELSSVIPSTFWN-LNSILSFDFS----SNSLNGS-----LPLDIENMKVVVEINLSRNY--LTGDIPPTIG-GLT 69 (467)
Q Consensus 3 ~l~~n~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~~-----~~~~~~~l~~L~~l~l~~n~--l~~~~~~~~~-~l~ 69 (467)
+|+.|++++..+..+.. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|++|. +++..+..+. .++
T Consensus 384 ~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~ 463 (592)
T 3ogk_B 384 AVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSP 463 (592)
T ss_dssp EEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCT
T ss_pred EeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCc
Confidence 33444444433333333 4555555553 4444431 11223445555555554322 3332222222 356
Q ss_pred CCCEEeccCCcccC-CCCccccCCCCCCEEEccCCccCCc-ccccccccccccccccccccccC
Q 041491 70 NLQLLSLENNRLQG-PIPESFGELTSLESLDLSVNNLSGV-IPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 70 ~L~~l~l~~N~l~~-~~p~~~~~~~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
+|+.|+|++|++++ .++..+..+++|+.|++++|.+++. ++..+..+++|+.|++++|+++.
T Consensus 464 ~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 464 NVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp TCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred cceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 67777777776654 2333445667777777777776533 23344556677777777777654
No 404
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.72 E-value=5.6e-10 Score=97.14 Aligned_cols=116 Identities=16% Similarity=0.155 Sum_probs=90.7
Q ss_pred cCccCCCCccEEEcCCC-cccC----CCCcCccCCCCccEEEccCCcCCCC----CCCCcCCCCCCCEEeccCCcccCC-
Q 041491 15 STFWNLNSILSFDFSSN-SLNG----SLPLDIENMKVVVEINLSRNYLTGD----IPPTIGGLTNLQLLSLENNRLQGP- 84 (467)
Q Consensus 15 ~~~~~l~~L~~L~l~~N-~l~~----~~~~~~~~l~~L~~l~l~~n~l~~~----~~~~~~~l~~L~~l~l~~N~l~~~- 84 (467)
..+...++|++|+|++| .|.. .+...+...++|++|+|++|+++.. +...+...++|++|+|++|.|+..
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34667899999999999 8863 2345667788999999999999732 344566678999999999999842
Q ss_pred ---CCccccCCCCCCEEEc--cCCccCCcc----ccccccccccccccccccccc
Q 041491 85 ---IPESFGELTSLESLDL--SVNNLSGVI----PISLEKLVYLKDLNLSFNRLK 130 (467)
Q Consensus 85 ---~p~~~~~~~~L~~L~l--~~N~l~~~~----~~~~~~l~~L~~l~l~~N~l~ 130 (467)
+..++...++|+.|+| ++|.+.... ...+...++|+.|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3556788889999999 889998543 344555588999999999875
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.71 E-value=1.8e-09 Score=111.71 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=57.9
Q ss_pred CCCCccEEEcCCCcccCC----CCcCccCCCCccEEEccCCcCCC----CCCCCcCCCCCCCEEeccCCcccC-------
Q 041491 19 NLNSILSFDFSSNSLNGS----LPLDIENMKVVVEINLSRNYLTG----DIPPTIGGLTNLQLLSLENNRLQG------- 83 (467)
Q Consensus 19 ~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~n~l~~----~~~~~~~~l~~L~~l~l~~N~l~~------- 83 (467)
++++|++|+|++|.+++. ++..+.++++|+.|+|++|.+++ .++..+.++++|+.|+|++|.+.+
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~ 241 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKA 241 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhh
Confidence 445555555555554432 12223344555555555555541 122223344555555555554442
Q ss_pred -------------------CCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 84 -------------------PIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 84 -------------------~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
..+..+..+++|+.|+++++... .+|..+..+++|+.|++++|.+++
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~ 307 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLET 307 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCH
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCH
Confidence 22234445555555555554333 456677778888888888887654
No 406
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.67 E-value=1.8e-07 Score=86.45 Aligned_cols=134 Identities=18% Similarity=0.084 Sum_probs=97.9
Q ss_pred ccCcccce-eEEEEEec-CCCeEEEEEeecccccchHHHHHHHHHHHcCC-CCCceeEEEEeecCCeeeEEEecccCCCH
Q 041491 225 LIGIGSFG-TVYKGRFL-DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFEALVLEYMANGSL 301 (467)
Q Consensus 225 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~L 301 (467)
.+..|..| .||+.... ++..+++|+-.. .....+.+|...|+.+. +-.+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34556555 68988765 467899998653 24466888999998774 33478899999999999999999999888
Q ss_pred HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 041491 302 EKCLYSSNGILDIFQRLSIMIDVALALEYLHFG----------------------------------------------- 334 (467)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~----------------------------------------------- 334 (467)
.+..... ......+..+++..|..||..
T Consensus 108 ~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 7754321 123345667777777777721
Q ss_pred --------CCCCceecCCCCCCeeecCCCcEEEeccccce
Q 041491 335 --------YSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366 (467)
Q Consensus 335 --------~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 366 (467)
....++|+|+.+.||++++++.+-|+||+.+.
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01126999999999999988777899999886
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.67 E-value=1.3e-07 Score=89.10 Aligned_cols=136 Identities=13% Similarity=0.104 Sum_probs=97.0
Q ss_pred CCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCC---CceeEEEEee-cCCeeeEEEecccC
Q 041491 223 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHR---NLVKIISSCS-NGNFEALVLEYMAN 298 (467)
Q Consensus 223 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 298 (467)
.+.++.|....||+. +..+++|+-.. ......+.+|.++++.+.+. .+.+.+.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356788888899987 57889998432 23446788999999998642 3667777764 45667899999999
Q ss_pred CCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 041491 299 GSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFG-------------------------------------------- 334 (467)
Q Consensus 299 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-------------------------------------------- 334 (467)
.++.+... ..++..+...++.++.+.|+.||..
T Consensus 98 ~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 88876321 1234555556666666666666621
Q ss_pred -------------CCCCceecCCCCCCeeecC---CCc-EEEecccccee
Q 041491 335 -------------YSNPVVHCDIKPSNVLLDD---DMV-AHLSDFGIAKL 367 (467)
Q Consensus 335 -------------~~~~ivH~dlkp~NIll~~---~~~-~kl~Dfg~a~~ 367 (467)
....++|+|++|.||++++ ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1335699999999999987 455 48999998864
No 408
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.66 E-value=1.3e-07 Score=88.03 Aligned_cols=76 Identities=14% Similarity=0.095 Sum_probs=61.2
Q ss_pred cCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCC---CceeEEEEeecCCeeeEEEecccC
Q 041491 222 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHR---NLVKIISSCSNGNFEALVLEYMAN 298 (467)
Q Consensus 222 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~ 298 (467)
..+.|+.|.++.||++...+|+.+++|+...........+..|++.++.+.+. .+++++++. ..++||||++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35679999999999999888999999996543333346789999999999764 588888764 36899999999
Q ss_pred CCH
Q 041491 299 GSL 301 (467)
Q Consensus 299 g~L 301 (467)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
No 409
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.66 E-value=4.6e-08 Score=95.74 Aligned_cols=124 Identities=10% Similarity=0.121 Sum_probs=102.8
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCC-----CCCCCCcCCCCCCCEEec
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLT-----GDIPPTIGGLTNLQLLSL 76 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~-----~~~~~~~~~l~~L~~l~l 76 (467)
++|.+ +++.+...+|.+ .+|+.+.|. |.++.+-+.+|.++++|+.+++.+|.+. ...+..|.+|++|+.++|
T Consensus 231 l~l~~-~l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l 307 (401)
T 4fdw_A 231 IEIPE-NVSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEI 307 (401)
T ss_dssp EECCT-TCCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECC
T ss_pred EecCC-CccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEe
Confidence 45554 477788889998 899999995 5566566789999999999999998875 356678999999999999
Q ss_pred cCCcccCCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccccccC
Q 041491 77 ENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 77 ~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 131 (467)
.+ .++.....+|.+|++|+.++|.+| ++.+.+..|.++ +|+.+++++|.+..
T Consensus 308 ~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 308 PE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp CT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred CC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 94 577666789999999999999665 776777899999 99999999997653
No 410
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.64 E-value=1.1e-07 Score=93.17 Aligned_cols=121 Identities=11% Similarity=0.071 Sum_probs=101.8
Q ss_pred eecCCCcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcc
Q 041491 2 LSLGSNELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRL 81 (467)
Q Consensus 2 L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l 81 (467)
+.|. ++++.+...+|.++++|+.++|.+| ++.+-..+|.+ .+|+.+.| .|.++...+..|.+|++|+.+++.+|.+
T Consensus 208 l~lp-~~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~ 283 (401)
T 4fdw_A 208 VLLP-VTLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTF 283 (401)
T ss_dssp EECC-TTCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCC
T ss_pred EEeC-CchheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccc
Confidence 4555 4588888999999999999999986 56566778888 79999999 4557756678999999999999999887
Q ss_pred c-----CCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccc
Q 041491 82 Q-----GPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFN 127 (467)
Q Consensus 82 ~-----~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 127 (467)
. ...+.+|..|++|+.++|. |.++.+....|.+|.+|+.++|..|
T Consensus 284 ~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 284 NDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp CCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred cCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 5 3556789999999999999 4588777789999999999999765
No 411
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.55 E-value=1.5e-07 Score=90.83 Aligned_cols=81 Identities=11% Similarity=0.010 Sum_probs=58.1
Q ss_pred CCcc-CcccceeEEEEEec-------CCCeEEEEEeeccc---ccchHHHHHHHHHHHcCC-C--CCceeEEEEeecC--
Q 041491 223 KSLI-GIGSFGTVYKGRFL-------DGMEVAIKVFHLQF---DGALKSFDAECEVLKSVR-H--RNLVKIISSCSNG-- 286 (467)
Q Consensus 223 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~-- 286 (467)
.+.| +.|....+|+.... +++.+++|+..... ......+.+|..+++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998764 26788999865432 111356788999998874 2 3578888887665
Q ss_pred -CeeeEEEecccCCCHHH
Q 041491 287 -NFEALVLEYMANGSLEK 303 (467)
Q Consensus 287 -~~~~lv~e~~~~g~L~~ 303 (467)
+..++||||++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 45689999999877653
No 412
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.51 E-value=2e-07 Score=90.00 Aligned_cols=75 Identities=8% Similarity=0.086 Sum_probs=57.3
Q ss_pred cCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCC--CceeEEEEeecC-CeeeEEEecccC
Q 041491 222 EKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHR--NLVKIISSCSNG-NFEALVLEYMAN 298 (467)
Q Consensus 222 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~-~~~~lv~e~~~~ 298 (467)
..+.++.|....+|+... +++.+++|+.... ..+..|..+++.+... .+.+++.++... +..++||||++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 356788999999999875 6789999986432 3588899999888643 366788777654 668999999998
Q ss_pred CCHH
Q 041491 299 GSLE 302 (467)
Q Consensus 299 g~L~ 302 (467)
.++.
T Consensus 119 ~~l~ 122 (362)
T 3ovc_A 119 VTLQ 122 (362)
T ss_dssp EETT
T ss_pred CCcc
Confidence 6653
No 413
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.47 E-value=3.1e-09 Score=109.88 Aligned_cols=124 Identities=16% Similarity=0.132 Sum_probs=74.2
Q ss_pred CCcccccCCcCcc-CCCCccEEEcCCCcccCCCCcCcc-CCCCccEEEcc--C----CcCCCCCC-----CCcCCCCCCC
Q 041491 6 SNELSSVIPSTFW-NLNSILSFDFSSNSLNGSLPLDIE-NMKVVVEINLS--R----NYLTGDIP-----PTIGGLTNLQ 72 (467)
Q Consensus 6 ~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~l~l~--~----n~l~~~~~-----~~~~~l~~L~ 72 (467)
.|.++......+. .+++|+.|+++.|.+++.....+. .+++|+.|+|+ + |++++... ..+..+++|+
T Consensus 356 ~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~ 435 (594)
T 2p1m_B 356 NVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLR 435 (594)
T ss_dssp SSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCC
T ss_pred CCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCcc
Confidence 3455433222232 367788887777777654444443 46778888887 3 45552211 1245667777
Q ss_pred EEeccCCcccCCCCccccC-CCCCCEEEccCCccCCcccccc-ccccccccccccccccc
Q 041491 73 LLSLENNRLQGPIPESFGE-LTSLESLDLSVNNLSGVIPISL-EKLVYLKDLNLSFNRLK 130 (467)
Q Consensus 73 ~l~l~~N~l~~~~p~~~~~-~~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~l~l~~N~l~ 130 (467)
.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|+++
T Consensus 436 ~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 436 RLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp EEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred EEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 777766 554433334443 6777777777777765444443 55677777777777774
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=6.1e-09 Score=90.52 Aligned_cols=106 Identities=13% Similarity=0.211 Sum_probs=84.2
Q ss_pred CeecCCC-ccccc----CCcCccCCCCccEEEcCCCcccCC----CCcCccCCCCccEEEccCCcCCCC----CCCCcCC
Q 041491 1 NLSLGSN-ELSSV----IPSTFWNLNSILSFDFSSNSLNGS----LPLDIENMKVVVEINLSRNYLTGD----IPPTIGG 67 (467)
Q Consensus 1 ~L~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~n~l~~~----~~~~~~~ 67 (467)
.|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|+|+.. +...+..
T Consensus 40 ~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~ 119 (185)
T 1io0_A 40 EVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQS 119 (185)
T ss_dssp EEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGG
T ss_pred EEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHh
Confidence 3789999 88742 456677789999999999999732 344566678899999999999843 4667888
Q ss_pred CCCCCEEec--cCCcccCC----CCccccCCCCCCEEEccCCccC
Q 041491 68 LTNLQLLSL--ENNRLQGP----IPESFGELTSLESLDLSVNNLS 106 (467)
Q Consensus 68 l~~L~~l~l--~~N~l~~~----~p~~~~~~~~L~~L~l~~N~l~ 106 (467)
.++|++|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 120 n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 120 NTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp CSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 899999999 88999743 3345667789999999999986
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.39 E-value=5.7e-08 Score=93.49 Aligned_cols=115 Identities=14% Similarity=0.089 Sum_probs=76.9
Q ss_pred CcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcC--CCCCCCEEeccC--CcccCC-----
Q 041491 14 PSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIG--GLTNLQLLSLEN--NRLQGP----- 84 (467)
Q Consensus 14 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~--~l~~L~~l~l~~--N~l~~~----- 84 (467)
+..+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.++......++ .+++|+.|+|+. |...+.
T Consensus 165 ~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~ 241 (362)
T 2ra8_A 165 SPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV 241 (362)
T ss_dssp HHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGG
T ss_pred HHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHH
Confidence 345667899999999988411 2333 43 78899999998887633223333 688999998863 332211
Q ss_pred CCccc--cCCCCCCEEEccCCccCCccccccc---ccccccccccccccccC
Q 041491 85 IPESF--GELTSLESLDLSVNNLSGVIPISLE---KLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 85 ~p~~~--~~~~~L~~L~l~~N~l~~~~~~~~~---~l~~L~~l~l~~N~l~~ 131 (467)
+...+ ..+++|+.|+|.+|.+.+..+..+. .+++|+.|+|+.|.+++
T Consensus 242 l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 242 FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 11122 3578999999999988754433333 47789999999998875
No 416
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.35 E-value=2.1e-08 Score=103.67 Aligned_cols=110 Identities=18% Similarity=0.121 Sum_probs=64.2
Q ss_pred cCCCCccEEEcCCCcccCCCCcCcc-CCCCccEEEccCC-cCCCC-CCCCcCCCCCCCEEeccCCcccCCCCccc----c
Q 041491 18 WNLNSILSFDFSSNSLNGSLPLDIE-NMKVVVEINLSRN-YLTGD-IPPTIGGLTNLQLLSLENNRLQGPIPESF----G 90 (467)
Q Consensus 18 ~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~l~l~~n-~l~~~-~~~~~~~l~~L~~l~l~~N~l~~~~p~~~----~ 90 (467)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ .
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3466777777777776655444443 5677777777777 44321 33334467777777777777665443333 2
Q ss_pred CCCCCCEEEccCCc--cCC-cccccccccccccccccccc
Q 041491 91 ELTSLESLDLSVNN--LSG-VIPISLEKLVYLKDLNLSFN 127 (467)
Q Consensus 91 ~~~~L~~L~l~~N~--l~~-~~~~~~~~l~~L~~l~l~~N 127 (467)
.+++|+.|++++|. ++. .++..+..+++|+.|++++|
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 55677777777775 210 01112234467777777766
No 417
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.28 E-value=3.5e-06 Score=82.35 Aligned_cols=75 Identities=15% Similarity=0.042 Sum_probs=50.6
Q ss_pred CCccCcccceeEEEEEec-CCCeEEEEEeecccc-------cchHHHHHHHHHHHcCCC--C-CceeEEEEeecCCeeeE
Q 041491 223 KSLIGIGSFGTVYKGRFL-DGMEVAIKVFHLQFD-------GALKSFDAECEVLKSVRH--R-NLVKIISSCSNGNFEAL 291 (467)
Q Consensus 223 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~l 291 (467)
.+.+|.|..+.||++... +++.+++|....... ....++..|.++++.+.. | .+++++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 467899999999999764 468899998653211 123566789999887732 3 455676543 344689
Q ss_pred EEecccCC
Q 041491 292 VLEYMANG 299 (467)
Q Consensus 292 v~e~~~~g 299 (467)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.23 E-value=3.7e-06 Score=80.26 Aligned_cols=139 Identities=17% Similarity=0.130 Sum_probs=79.1
Q ss_pred CccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCC--CCCceeEEE------EeecCCeeeEEEec
Q 041491 224 SLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR--HRNLVKIIS------SCSNGNFEALVLEY 295 (467)
Q Consensus 224 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~------~~~~~~~~~lv~e~ 295 (467)
+.|+.|..+.||+....+| .+++|+.... ...+..|..+++.+. .-.+++++. +....+..+++|+|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4466677899999987544 5899988642 233445555555442 112333332 11245678899999
Q ss_pred ccCCCHH-----H---------hhhc----C--CC-------CCCHHHH-------------------------------
Q 041491 296 MANGSLE-----K---------CLYS----S--NG-------ILDIFQR------------------------------- 317 (467)
Q Consensus 296 ~~~g~L~-----~---------~l~~----~--~~-------~~~~~~~------------------------------- 317 (467)
++|.++. . .++. . .. ...|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 0111 0 00 0112110
Q ss_pred HHHHHHHHHHHHHHhc----------CCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 318 LSIMIDVALALEYLHF----------GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 318 ~~i~~~i~~~l~~LH~----------~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
..+..++..++.+|+. .....++|+|+++.||+++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111223345555541 0257899999999999998888999999998763
No 419
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.18 E-value=5.3e-06 Score=80.98 Aligned_cols=120 Identities=13% Similarity=0.193 Sum_probs=98.6
Q ss_pred CcccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCC
Q 041491 7 NELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIP 86 (467)
Q Consensus 7 n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 86 (467)
+.++.+...+|.++.+|+.+.+.++... .-..+|.++++|+.+.+. +.++......|.+|.+|+.++|..| ++....
T Consensus 251 ~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~ 327 (394)
T 4gt6_A 251 NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILD 327 (394)
T ss_dssp TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECT
T ss_pred CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehH
Confidence 3455566778999999999999887764 667789999999999997 4566566678999999999999865 654556
Q ss_pred ccccCCCCCCEEEccCCccCCccccccccccccccccccccccc
Q 041491 87 ESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLK 130 (467)
Q Consensus 87 ~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 130 (467)
.+|.+|.+|+.+.+..+ ++.+....|.+|.+|+.+++.+|...
T Consensus 328 ~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 328 DAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred hHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 78999999999999765 66666789999999999999987643
No 420
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.07 E-value=1.1e-05 Score=78.11 Aligned_cols=116 Identities=13% Similarity=0.212 Sum_probs=75.6
Q ss_pred ccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCcc
Q 041491 9 LSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPES 88 (467)
Q Consensus 9 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~ 88 (467)
++.+...+|.++.+|+.+.+..+ ++..-..+|.++.+|+.+.+..+ ++......|.+|++|+.+.+.+|.++.....+
T Consensus 228 ~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~a 305 (379)
T 4h09_A 228 VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRV 305 (379)
T ss_dssp CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTT
T ss_pred eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhh
Confidence 44445556666777777777665 44345566777777777777544 44344456777777777777777776555567
Q ss_pred ccCCCCCCEEEccCCccCCcccccccccccccccccccc
Q 041491 89 FGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFN 127 (467)
Q Consensus 89 ~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 127 (467)
|.+|.+|+.+.|.++ ++.+....|.+|.+|+.+.+..+
T Consensus 306 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 306 FMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred hcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 777777777777654 55455567777777777776543
No 421
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.06 E-value=1.1e-06 Score=84.40 Aligned_cols=114 Identities=15% Similarity=0.106 Sum_probs=64.4
Q ss_pred cCccCCCCccEEEcCCCccc---------CCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCC
Q 041491 15 STFWNLNSILSFDFSSNSLN---------GSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPI 85 (467)
Q Consensus 15 ~~~~~l~~L~~L~l~~N~l~---------~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 85 (467)
.+...+++|+.|.+.++... +.++..+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.+....
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHH
Confidence 34555677777777665432 112334456678888888777311 2333 33 678888888877765322
Q ss_pred Ccccc--CCCCCCEEEccC--CccCCcc-----cccc--cccccccccccccccccC
Q 041491 86 PESFG--ELTSLESLDLSV--NNLSGVI-----PISL--EKLVYLKDLNLSFNRLKG 131 (467)
Q Consensus 86 p~~~~--~~~~L~~L~l~~--N~l~~~~-----~~~~--~~l~~L~~l~l~~N~l~~ 131 (467)
...+. .+++|+.|+|+. |...+.. ...+ ..+++|+.|+|.+|.++.
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~ 266 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQN 266 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHH
T ss_pred HHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCch
Confidence 22332 677888887752 2211110 1112 235778888888777764
No 422
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=98.02 E-value=3.7e-05 Score=72.17 Aligned_cols=136 Identities=15% Similarity=0.110 Sum_probs=92.1
Q ss_pred CCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCC---CCCceeEEEEeecCCeeeEEEecccCC
Q 041491 223 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR---HRNLVKIISSCSNGNFEALVLEYMANG 299 (467)
Q Consensus 223 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~g 299 (467)
.+.|+.|....+|+... ++..+++|+.... ....+..|...|+.+. ...+++++++....+..++||||++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 46789999999999976 5778999986533 3567889999888873 367889999888888899999999987
Q ss_pred CHHH-----------hhhcCCC---------------------CCCHHHHH---HHH----------------HHHHHHH
Q 041491 300 SLEK-----------CLYSSNG---------------------ILDIFQRL---SIM----------------IDVALAL 328 (467)
Q Consensus 300 ~L~~-----------~l~~~~~---------------------~~~~~~~~---~i~----------------~~i~~~l 328 (467)
.+.. .++.... .-+|.... ++. .+++..+
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6421 1222111 01343221 111 1122222
Q ss_pred -HHHh-cCCCCCceecCCCCCCeeecCCCcEEEeccc
Q 041491 329 -EYLH-FGYSNPVVHCDIKPSNVLLDDDMVAHLSDFG 363 (467)
Q Consensus 329 -~~LH-~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg 363 (467)
..|. ......++|+|+.+.|++++.++ +.|+||.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2332 12256899999999999999887 8899974
No 423
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.96 E-value=1.4e-05 Score=77.89 Aligned_cols=116 Identities=13% Similarity=0.188 Sum_probs=86.5
Q ss_pred cccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCc
Q 041491 8 ELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPE 87 (467)
Q Consensus 8 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 87 (467)
.+..+...+|.++++|+.+.+. +.+..+-..+|.++.+|+.+.|..+ ++..-..+|.+|.+|+.+.|..+ ++..-..
T Consensus 275 ~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~ 351 (394)
T 4gt6_A 275 SVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPES 351 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGG
T ss_pred ccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHh
Confidence 3444667889999999999997 4566566789999999999999875 66556778999999999999765 6656667
Q ss_pred cccCCCCCCEEEccCCccCCcccccccccccccccccccccc
Q 041491 88 SFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRL 129 (467)
Q Consensus 88 ~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 129 (467)
+|.+|++|+.+++.+|... -..+..+.+|+.+.+..|.+
T Consensus 352 aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 352 AFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp GGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred HhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 9999999999999998754 24677778899998877754
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.92 E-value=1.4e-06 Score=73.94 Aligned_cols=82 Identities=13% Similarity=0.091 Sum_probs=35.4
Q ss_pred CccEEEcCCCcccCCCCcCccCCCCccEEEccCCc-CCCCCCCCcCCC----CCCCEEeccCCc-ccCCCCccccCCCCC
Q 041491 22 SILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNY-LTGDIPPTIGGL----TNLQLLSLENNR-LQGPIPESFGELTSL 95 (467)
Q Consensus 22 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~-l~~~~~~~~~~l----~~L~~l~l~~N~-l~~~~p~~~~~~~~L 95 (467)
+|++|||+++.++..--..+.++++|+.|+|++|. ++..--..++.+ ++|++|+|++|. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555442222334455555555555553 331111122222 245555555542 432211233445555
Q ss_pred CEEEccCC
Q 041491 96 ESLDLSVN 103 (467)
Q Consensus 96 ~~L~l~~N 103 (467)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.86 E-value=6.6e-05 Score=69.76 Aligned_cols=79 Identities=14% Similarity=0.095 Sum_probs=58.5
Q ss_pred cCccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCC-C--CCceeEEEEeecCCeeeEEEec
Q 041491 219 HFSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-H--RNLVKIISSCSNGNFEALVLEY 295 (467)
Q Consensus 219 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~lv~e~ 295 (467)
...-.+.+|.|..+.||+.+..+|+.|++|+...........+..|...|+.+. . -.+++++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 344467789999999999999899999999876444444467889999998874 2 2456666653 24789999
Q ss_pred ccCCCH
Q 041491 296 MANGSL 301 (467)
Q Consensus 296 ~~~g~L 301 (467)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.84 E-value=2.7e-06 Score=72.16 Aligned_cols=92 Identities=17% Similarity=0.144 Sum_probs=68.9
Q ss_pred CCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCc-ccCCCCccccCC----CCCCEEEccCCc-cCCccc
Q 041491 37 LPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNR-LQGPIPESFGEL----TSLESLDLSVNN-LSGVIP 110 (467)
Q Consensus 37 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~-l~~~~p~~~~~~----~~L~~L~l~~N~-l~~~~~ 110 (467)
+|.....-.+|++|||+++.++..--..+.+|++|+.|+|++|. |+..--..+..+ ++|+.|+|+++. ++..--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 35444444579999999999885544567899999999999995 664222345543 479999999975 775444
Q ss_pred cccccccccccccccccc
Q 041491 111 ISLEKLVYLKDLNLSFNR 128 (467)
Q Consensus 111 ~~~~~l~~L~~l~l~~N~ 128 (467)
..+.++++|+.|++++++
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 567889999999999875
No 427
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.80 E-value=5.4e-05 Score=73.81 Aligned_cols=113 Identities=17% Similarity=0.147 Sum_probs=58.4
Q ss_pred cccCCcCccCCCCccEEEcCCCcccCCCCcCcc---------------------CCCCccEEEccCCcCCCCCCCCcCCC
Q 041491 10 SSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIE---------------------NMKVVVEINLSRNYLTGDIPPTIGGL 68 (467)
Q Consensus 10 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~---------------------~l~~L~~l~l~~n~l~~~~~~~~~~l 68 (467)
+.+....|..+.+|+.+.+..|... .....|. ++.+|+.+.+..+ ++..-..+|.+|
T Consensus 242 ~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c 319 (394)
T 4fs7_A 242 TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESC 319 (394)
T ss_dssp CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC
T ss_pred eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccccccccccccccccccc-cceechhhhcCC
Confidence 3344556666677777776665543 3333444 4445555555433 332334445555
Q ss_pred CCCCEEeccCCcccCCCCccccCCCCCCEEEccCCccCCccccccccccccccccccc
Q 041491 69 TNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSF 126 (467)
Q Consensus 69 ~~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 126 (467)
++|+.++|.++ ++.....+|.+|++|+.+++..| ++.+....|.+|.+|+.+++..
T Consensus 320 ~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 320 TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 55555555433 43333445555555555555544 4434445555555555555543
No 428
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.76 E-value=4.5e-05 Score=74.38 Aligned_cols=117 Identities=18% Similarity=0.073 Sum_probs=85.4
Q ss_pred cccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCccc-----
Q 041491 8 ELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQ----- 82 (467)
Q Consensus 8 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~----- 82 (467)
.++.+...+|.++.+|+.+.|.++ ++.+-..+|.++++|+.++|.+| ++..-...|.++++|+.+.+..+--.
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~a 135 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEA 135 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeeccee
Confidence 456677788999999999999855 76566778999999999999866 65455667888888888776544111
Q ss_pred ----------------CCCCccccCCCCCCEEEccCCccCCcccccccccccccccccccc
Q 041491 83 ----------------GPIPESFGELTSLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFN 127 (467)
Q Consensus 83 ----------------~~~p~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 127 (467)
.....+|.+|++|+.+.+.++.. ......|..+.+|+.+++..|
T Consensus 136 F~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp TTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT
T ss_pred eecccccccccCccccccchhhhcccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC
Confidence 11234677788888888876543 355677788888888887665
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.76 E-value=8.9e-05 Score=69.33 Aligned_cols=129 Identities=12% Similarity=0.100 Sum_probs=77.3
Q ss_pred CCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCC-CCCceeEEEEeecCCeeeEEEecc-cCCC
Q 041491 223 KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFEALVLEYM-ANGS 300 (467)
Q Consensus 223 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~-~~g~ 300 (467)
.+.|+.|....+|+. ..+++|+....... .....+|..+++.+. +.-..++++...+ .-++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCCcc
Confidence 678889999999998 67889987643221 223456888877764 2222566665433 347899999 6654
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-----------------------------------------------
Q 041491 301 LEKCLYSSNGILDIFQRLSIMIDVALALEYLHF----------------------------------------------- 333 (467)
Q Consensus 301 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~----------------------------------------------- 333 (467)
+....... ...+..++++.|+-||.
T Consensus 95 l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 95 MSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp CCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred CCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 42100000 00112222222222221
Q ss_pred ---CCCCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 334 ---GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 334 ---~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
.....++|+|+.|.||+ ..++.+.++||..+..-
T Consensus 167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred HhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 12345899999999999 56678899999988753
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.75 E-value=8.9e-05 Score=69.99 Aligned_cols=157 Identities=13% Similarity=0.128 Sum_probs=86.7
Q ss_pred ccHHHHHHHhccCcc-----CCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCC--ceeEE
Q 041491 208 FSYQELLLATDHFSE-----KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN--LVKII 280 (467)
Q Consensus 208 ~~~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~ 280 (467)
++.+++......|.+ .+.|+.|....+|+....+| .+++|+.... .....+..|..+++.+.... +++++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 444555544455654 24566788889999987555 7889988652 12345667887777663211 33333
Q ss_pred EE------eecCCeeeEEEecccCCCHHH-----h---------hhcC----CCC----C---CHHHHHH----------
Q 041491 281 SS------CSNGNFEALVLEYMANGSLEK-----C---------LYSS----NGI----L---DIFQRLS---------- 319 (467)
Q Consensus 281 ~~------~~~~~~~~lv~e~~~~g~L~~-----~---------l~~~----~~~----~---~~~~~~~---------- 319 (467)
.. ....+..+++++|++|..+.. + ++.. ... . .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 122356789999999865321 0 1110 000 0 1111000
Q ss_pred --HHHHHHHHHHHHhc----CCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 320 --IMIDVALALEYLHF----GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 320 --i~~~i~~~l~~LH~----~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
+...+...+++++. ....+++|+|+.+.||++++++.+.++||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 00113334444441 1246799999999999999876668999998763
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.75 E-value=0.00011 Score=72.33 Aligned_cols=74 Identities=11% Similarity=0.062 Sum_probs=47.2
Q ss_pred CCCceecCCCCCCeeecCCCcEEEeccccceecCCCCcccc------ccccccccccCC---CCCCcccchhhHHHHHHH
Q 041491 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRT------QTLATIEYGREG---QVSPKSDVYGYGITLIET 406 (467)
Q Consensus 336 ~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~------~~~~~pe~~~~~---~~~~~~Dv~slGvil~el 406 (467)
...++|+|++|.||++++++ ++++||+.+..-........ ..|.+|++.... ......++.+....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 78899999999999998876 99999999875432211111 123334333211 111234556788888888
Q ss_pred hcCC
Q 041491 407 FTKK 410 (467)
Q Consensus 407 ~tg~ 410 (467)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 432
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.75 E-value=6.9e-05 Score=72.56 Aligned_cols=107 Identities=10% Similarity=0.107 Sum_probs=87.4
Q ss_pred cccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccCCcccCCCCc
Q 041491 8 ELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLENNRLQGPIPE 87 (467)
Q Consensus 8 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 87 (467)
.++.+...+|.++.+|+.+.+..+ +......+|.++++|+.+.+.++.++..-+..|.+|.+|+.+.|..+ ++.....
T Consensus 250 ~v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 327 (379)
T 4h09_A 250 NVTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVY 327 (379)
T ss_dssp TCCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred CccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHH
Confidence 366677889999999999999766 55456678999999999999999998666788999999999999765 6655567
Q ss_pred cccCCCCCCEEEccCCccCCcccccccccc
Q 041491 88 SFGELTSLESLDLSVNNLSGVIPISLEKLV 117 (467)
Q Consensus 88 ~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~ 117 (467)
+|.+|++|+.+.+..+ ++.+-...|.++.
T Consensus 328 aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 328 AFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred HhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 9999999999999765 5545556776654
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.73 E-value=4.8e-05 Score=61.42 Aligned_cols=39 Identities=31% Similarity=0.336 Sum_probs=19.9
Q ss_pred CCCEEEccCCccCCcccccccccccccccccccccccCC
Q 041491 94 SLESLDLSVNNLSGVIPISLEKLVYLKDLNLSFNRLKGD 132 (467)
Q Consensus 94 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 132 (467)
+|+.|+|++|+|+.+.+..|..+++|+.|+|++|++.++
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 345555555555544444455555555555555555543
No 434
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.65 E-value=0.00019 Score=69.17 Aligned_cols=139 Identities=12% Similarity=0.105 Sum_probs=84.1
Q ss_pred CccCcccceeEEEEEec--------CCCeEEEEEeecccccchHHHHHHHHHHHcCC-CCCceeEEEEeecCCeeeEEEe
Q 041491 224 SLIGIGSFGTVYKGRFL--------DGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 224 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 294 (467)
+.+..|-...+|++... +++.+++|+.... ........+|.++++.+. +.-.+++++.+.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 56777888999999864 2478999986332 123456678999988774 3334677777654 28999
Q ss_pred cccCCCHHHh-----------------hhcCC----CCCC--HHHHHHHHHHHHH-------------------HHHHHh
Q 041491 295 YMANGSLEKC-----------------LYSSN----GILD--IFQRLSIMIDVAL-------------------ALEYLH 332 (467)
Q Consensus 295 ~~~~g~L~~~-----------------l~~~~----~~~~--~~~~~~i~~~i~~-------------------~l~~LH 332 (467)
|++|.++..- ++... .... +.++.++..++.. .+.+|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998655311 11111 1112 3444445444321 122322
Q ss_pred -----cCCCCCceecCCCCCCeeecCC----CcEEEecccccee
Q 041491 333 -----FGYSNPVVHCDIKPSNVLLDDD----MVAHLSDFGIAKL 367 (467)
Q Consensus 333 -----~~~~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~a~~ 367 (467)
......++|+|+.+.||+++++ +.+.++||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1124578999999999999876 7899999998863
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.60 E-value=0.00044 Score=65.51 Aligned_cols=141 Identities=13% Similarity=0.064 Sum_probs=75.3
Q ss_pred CccCccccee-EEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCC-C-CCceeEEEEeecCCeeeEEEecccCCC
Q 041491 224 SLIGIGSFGT-VYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVR-H-RNLVKIISSCSNGNFEALVLEYMANGS 300 (467)
Q Consensus 224 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~niv~~~~~~~~~~~~~lv~e~~~~g~ 300 (467)
+.|+.|.... +|+....++..+++|...... ...+..|+.+++.+. + -.+++++.+....+ +++||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4565565554 667765446778887644321 134456777777663 2 34667777654444 68999997766
Q ss_pred HHHhhhcC---------------------C----CCCCHHHHH-------H-H------------HHHHHHHHHHHh---
Q 041491 301 LEKCLYSS---------------------N----GILDIFQRL-------S-I------------MIDVALALEYLH--- 332 (467)
Q Consensus 301 L~~~l~~~---------------------~----~~~~~~~~~-------~-i------------~~~i~~~l~~LH--- 332 (467)
+.+.+... . ..++..... . + ...+...+..+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 64433110 0 111111100 0 0 001111222221
Q ss_pred cCCCCCceecCCCCCCeeecCC----CcEEEeccccceecC
Q 041491 333 FGYSNPVVHCDIKPSNVLLDDD----MVAHLSDFGIAKLLN 369 (467)
Q Consensus 333 ~~~~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~a~~~~ 369 (467)
......++|||+.+.||+++.+ +.+.|+||+.+..-.
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 1125689999999999999874 689999999887543
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.60 E-value=5.8e-06 Score=71.48 Aligned_cols=112 Identities=15% Similarity=0.137 Sum_probs=71.2
Q ss_pred ccCCCCccEEEcCCC-cccC----CCCcCccCCCCccEEEccCCcCCCC----CCCCcCCCCCCCEEeccCCcccCC---
Q 041491 17 FWNLNSILSFDFSSN-SLNG----SLPLDIENMKVVVEINLSRNYLTGD----IPPTIGGLTNLQLLSLENNRLQGP--- 84 (467)
Q Consensus 17 ~~~l~~L~~L~l~~N-~l~~----~~~~~~~~l~~L~~l~l~~n~l~~~----~~~~~~~l~~L~~l~l~~N~l~~~--- 84 (467)
+.+-+.|++|+|++| .|.. .+.+++..-+.|+.|+|++|+|... +.+.+..-+.|+.|+|+.|+|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 345578888888885 7652 2344556667888888888888632 334455667888888888888742
Q ss_pred -CCccccCCCCCCEEEccCCcc---CCc----cccccccccccccccccccc
Q 041491 85 -IPESFGELTSLESLDLSVNNL---SGV----IPISLEKLVYLKDLNLSFNR 128 (467)
Q Consensus 85 -~p~~~~~~~~L~~L~l~~N~l---~~~----~~~~~~~l~~L~~l~l~~N~ 128 (467)
+-.++..-+.|+.|+|++|.. ... +-..+..=++|+.|+++.|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 223455666788888886533 211 12233333567777776554
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.58 E-value=0.00021 Score=70.39 Aligned_cols=73 Identities=18% Similarity=0.172 Sum_probs=50.5
Q ss_pred CCccCcccceeEEEEEecC--------CCeEEEEEeecccccchHHHHHHHHHHHcCC-CCCceeEEEEeecCCeeeEEE
Q 041491 223 KSLIGIGSFGTVYKGRFLD--------GMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFEALVL 293 (467)
Q Consensus 223 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~ 293 (467)
.+.|+.|....+|++...+ ++.+++|+.... .....+.+|..+++.+. +.-.+++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3568888899999998753 578999987432 12245567998888874 3334677776543 3899
Q ss_pred ecccCCCH
Q 041491 294 EYMANGSL 301 (467)
Q Consensus 294 e~~~~g~L 301 (467)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987443
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.55 E-value=0.00017 Score=58.12 Aligned_cols=56 Identities=23% Similarity=0.318 Sum_probs=34.1
Q ss_pred EEEccCCcCC-CCCCCCcCCCCCCCEEeccCCcccCCCCccccCCCCCCEEEccCCccC
Q 041491 49 EINLSRNYLT-GDIPPTIGGLTNLQLLSLENNRLQGPIPESFGELTSLESLDLSVNNLS 106 (467)
Q Consensus 49 ~l~l~~n~l~-~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~L~~L~l~~N~l~ 106 (467)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666664 23444332 35666777777776555556666777777777777664
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.54 E-value=0.00032 Score=69.42 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=48.8
Q ss_pred CCccCcccceeEEEEEecC-CCeEEEEEeecccccchHHHHHHHHHHHcCCCCC-ceeEEEEeecCCeeeEEEecccCCC
Q 041491 223 KSLIGIGSFGTVYKGRFLD-GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN-LVKIISSCSNGNFEALVLEYMANGS 300 (467)
Q Consensus 223 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~g~ 300 (467)
.+.|+.|-...+|++...+ +..+++|+....... .-...+|..+++.+...+ .+++++.+. + .+|+||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3568889899999998754 478999987543221 122368899898885433 467777763 2 35999998854
Q ss_pred H
Q 041491 301 L 301 (467)
Q Consensus 301 L 301 (467)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.53 E-value=0.0005 Score=64.94 Aligned_cols=156 Identities=12% Similarity=0.075 Sum_probs=88.0
Q ss_pred ccHHHHHHHhccCcc-----CCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCC--CCceeEE
Q 041491 208 FSYQELLLATDHFSE-----KSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRH--RNLVKII 280 (467)
Q Consensus 208 ~~~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~ 280 (467)
.+.+++...-..|.+ .+.++ |....||+....+|+.+++|+..... .....+..|..+++.+.. -.+++++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeeccee
Confidence 444444443344432 23466 78889999877667789999986331 234567778888777632 1234443
Q ss_pred EE-----eecCCeeeEEEecccCCCHH-----Hh---------hhc----C----CCCCCHHHH----------------
Q 041491 281 SS-----CSNGNFEALVLEYMANGSLE-----KC---------LYS----S----NGILDIFQR---------------- 317 (467)
Q Consensus 281 ~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~~----~----~~~~~~~~~---------------- 317 (467)
.. ....+..+++|+|++|.++. .. ++. . ....++...
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 32 12245667899999885432 10 111 0 011222111
Q ss_pred ------HHHHHHHHHHHHHHhc-CCCCCceecCCCCCCeeecCCCcEEEecccccee
Q 041491 318 ------LSIMIDVALALEYLHF-GYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKL 367 (467)
Q Consensus 318 ------~~i~~~i~~~l~~LH~-~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~ 367 (467)
...+.+++..+...-. .....++|+|+++.||+++ + .+.++||+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 0111122222222210 1256789999999999999 4 899999988764
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.37 E-value=0.00041 Score=66.81 Aligned_cols=73 Identities=15% Similarity=0.236 Sum_probs=45.2
Q ss_pred CccCcccceeEEEEEecC---------CCeEEEEEeecccccchHHHHHHHHHHHcCCCCC-ceeEEEEeecCCeeeEEE
Q 041491 224 SLIGIGSFGTVYKGRFLD---------GMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRN-LVKIISSCSNGNFEALVL 293 (467)
Q Consensus 224 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 293 (467)
+.++.|....+|+....+ ++.+++|+...... .......|..+++.+...+ ++++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 567888889999998643 26889998754322 1223467888888774223 45777654 2 26899
Q ss_pred ecccCCCH
Q 041491 294 EYMANGSL 301 (467)
Q Consensus 294 e~~~~g~L 301 (467)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99988543
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.22 E-value=0.0016 Score=61.81 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=28.7
Q ss_pred CCCceecCCCCCCeeecCCCcEEEeccccceec
Q 041491 336 SNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLL 368 (467)
Q Consensus 336 ~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~ 368 (467)
...++|+|+.+.||++++++.+.++||+.+..-
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 457999999999999998888999999887643
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.22 E-value=2.5e-05 Score=67.47 Aligned_cols=105 Identities=16% Similarity=0.204 Sum_probs=76.8
Q ss_pred eecCCC-cccc----cCCcCccCCCCccEEEcCCCcccC----CCCcCccCCCCccEEEccCCcCCCC----CCCCcCCC
Q 041491 2 LSLGSN-ELSS----VIPSTFWNLNSILSFDFSSNSLNG----SLPLDIENMKVVVEINLSRNYLTGD----IPPTIGGL 68 (467)
Q Consensus 2 L~l~~n-~l~~----~~p~~~~~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~l~l~~n~l~~~----~~~~~~~l 68 (467)
|+|++| +|.. .+.+++..-+.|+.|+|++|+|.. .+.+.+..-+.|++|+|++|+|+.. +.+.+..-
T Consensus 46 L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N 125 (197)
T 1pgv_A 46 VNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVT 125 (197)
T ss_dssp EECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTT
T ss_pred EECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhC
Confidence 788875 6653 245667778999999999999972 2334455668899999999999733 34456677
Q ss_pred CCCCEEeccCCcc---cC----CCCccccCCCCCCEEEccCCccC
Q 041491 69 TNLQLLSLENNRL---QG----PIPESFGELTSLESLDLSVNNLS 106 (467)
Q Consensus 69 ~~L~~l~l~~N~l---~~----~~p~~~~~~~~L~~L~l~~N~l~ 106 (467)
+.|+.|+|++|.. .. .+...+..-+.|+.|+++.|.+-
T Consensus 126 ~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 126 QSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp CCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred CceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 7899999997643 31 13345666789999999887753
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=97.07 E-value=0.0018 Score=62.55 Aligned_cols=139 Identities=16% Similarity=0.163 Sum_probs=83.3
Q ss_pred CccCcccceeEEEEEecC--------CCeEEEEEeeccccc------------------chHHHHHHHHHHHcCC-CCCc
Q 041491 224 SLIGIGSFGTVYKGRFLD--------GMEVAIKVFHLQFDG------------------ALKSFDAECEVLKSVR-HRNL 276 (467)
Q Consensus 224 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~ni 276 (467)
+.|..|-...+|++...+ +..|.+++.-...+. ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988753 367888887543221 0112235888888774 4456
Q ss_pred eeEEEEeecCCeeeEEEecccCCCHHH--h---------------hhcCC----CCCC--HHHHHHHHHHHH--------
Q 041491 277 VKIISSCSNGNFEALVLEYMANGSLEK--C---------------LYSSN----GILD--IFQRLSIMIDVA-------- 325 (467)
Q Consensus 277 v~~~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~----~~~~--~~~~~~i~~~i~-------- 325 (467)
.++++++..+ +|+||++|-+|.. + ++... .... +....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6788876532 8999999755421 1 11111 1122 223333433321
Q ss_pred --------------HHHH----HHh-cCCCCCceecCCCCCCeeecCC------CcEEEeccccce
Q 041491 326 --------------LALE----YLH-FGYSNPVVHCDIKPSNVLLDDD------MVAHLSDFGIAK 366 (467)
Q Consensus 326 --------------~~l~----~LH-~~~~~~ivH~dlkp~NIll~~~------~~~kl~Dfg~a~ 366 (467)
.-+. +|. ......++|+|+.+.||+++++ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 222 1224578999999999999876 789999998875
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.76 E-value=0.0038 Score=60.93 Aligned_cols=73 Identities=12% Similarity=0.198 Sum_probs=49.4
Q ss_pred CccCcccceeEEEEEecC--------CCeEEEEEeecccccchHHHHHHHHHHHcCC-CCCceeEEEEeecCCeeeEEEe
Q 041491 224 SLIGIGSFGTVYKGRFLD--------GMEVAIKVFHLQFDGALKSFDAECEVLKSVR-HRNLVKIISSCSNGNFEALVLE 294 (467)
Q Consensus 224 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 294 (467)
+.+..|-...+|+....+ ++.+++|+...... ......+|..+++.+. +.-.+++++.+. -+.|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 567778889999998753 57899998654322 2233467888888774 333566666442 268999
Q ss_pred cccCCCH
Q 041491 295 YMANGSL 301 (467)
Q Consensus 295 ~~~~g~L 301 (467)
|++|.++
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998654
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.64 E-value=0.0029 Score=54.92 Aligned_cols=106 Identities=14% Similarity=0.034 Sum_probs=70.2
Q ss_pred CCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccceecCCCCcccccc
Q 041491 299 GSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAKLLNGKESMRTQT 378 (467)
Q Consensus 299 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 378 (467)
-+|.+.+...+.++++.++|.++.|.+.+|.-+-. ++.-..+=+.|..|++..+|.+...+ ..+. .....
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-------~~~~~ 102 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD-------AGEPP 102 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------ccccC
Confidence 37899998888999999999999999999888720 11111333456889999999887664 1111 12334
Q ss_pred ccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCc
Q 041491 379 LATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCE 415 (467)
Q Consensus 379 ~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~ 415 (467)
+.+||... ...+.+.=|||+|+++|..+-=..|-+.
T Consensus 103 ~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e 138 (229)
T 2yle_A 103 PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE 138 (229)
T ss_dssp ----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE
T ss_pred CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc
Confidence 56677653 3446778899999999999886666543
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.39 E-value=0.048 Score=52.85 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=25.3
Q ss_pred CceecCCCCCCeee------cCCCcEEEecccccee
Q 041491 338 PVVHCDIKPSNVLL------DDDMVAHLSDFGIAKL 367 (467)
Q Consensus 338 ~ivH~dlkp~NIll------~~~~~~kl~Dfg~a~~ 367 (467)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4456799999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=92.61 E-value=0.23 Score=42.97 Aligned_cols=120 Identities=9% Similarity=0.105 Sum_probs=81.2
Q ss_pred CCCCceeEEEEeecCCeeeEEEeccc-CCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCee
Q 041491 272 RHRNLVKIISSCSNGNFEALVLEYMA-NGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNVL 350 (467)
Q Consensus 272 ~h~niv~~~~~~~~~~~~~lv~e~~~-~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NIl 350 (467)
.||+++.. .+-...+.+.+.++.-+ +-++.. + ...+...+++++.+++....+++ . -+|--+.|+|++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i----k~~~~~eKlr~l~ni~~l~~~~~---~--r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I----KSFTKNEKLRYLLNIKNLEEVNR---T--RYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G----GGSCHHHHHHHHHHGGGGGGGGG---S--SEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H----HhcCHHHHHHHHHHHHHHHHHhc---C--ceEEEEecceEE
Confidence 58888866 45566666555555433 223322 2 24688899999999988886655 2 378889999999
Q ss_pred ecCCCcEEEeccccceecCCCCccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCccccc
Q 041491 351 LDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEIFCE 419 (467)
Q Consensus 351 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~~~~ 419 (467)
++.++.+++.-.|+-..+ .+...+...=.-.+=+++..+++++..|++...+
T Consensus 112 f~~~~~p~i~~RGik~~l-----------------~P~~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV-----------------DPLPVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp ECTTSCEEESCCEETTTB-----------------SCCCCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred EcCCCCEEEEEccCccCC-----------------CCCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 999999999877764322 1222222333446778888999999999765443
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=90.25 E-value=0.81 Score=39.71 Aligned_cols=116 Identities=8% Similarity=0.058 Sum_probs=77.0
Q ss_pred CCCCceeEEEEeecCCeeeEEEecccCC-CHHHhhhcCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCceecCCCCCCe
Q 041491 272 RHRNLVKIISSCSNGNFEALVLEYMANG-SLEKCLYSSNGILDIFQRLSIMIDVALALE-YLHFGYSNPVVHCDIKPSNV 349 (467)
Q Consensus 272 ~h~niv~~~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~dlkp~NI 349 (467)
.||++ -...-.+.+...+.++.-+++ ++.. + ..++...+++++.+++.... +++ .-+|--+.|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i----~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-I----RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-H----HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-H----HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceE
Confidence 57887 334446667766666654332 3332 3 24678889999888877666 444 457888999999
Q ss_pred eecCCCcEEEeccccceecCCCCccccccccccccccCCCCCCcccchhhHHHHHHHhcCCCCCCcc
Q 041491 350 LLDDDMVAHLSDFGIAKLLNGKESMRTQTLATIEYGREGQVSPKSDVYGYGITLIETFTKKKPTCEI 416 (467)
Q Consensus 350 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slGvil~el~tg~~Pf~~~ 416 (467)
++|.++.+++.-.|+-..+ .|...+..-=.-.+=+++..++.++..|++.
T Consensus 116 ~f~~~~~p~i~hRGi~~~l-----------------pP~e~~ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL-----------------PPDEWDDERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp EECTTCCEEESCCEETTTB-----------------SSCSCCHHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred EEeCCCcEEEEEcCCcccC-----------------CCCCCCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999888774322 2222222222346678888889999888754
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=82.13 E-value=0.15 Score=50.35 Aligned_cols=61 Identities=13% Similarity=0.031 Sum_probs=18.0
Q ss_pred ccCCccCcccceeEEEEEecC-CCeEEE------EEeeccc--ccchHHHHHHHHHHHcCCCCCceeEEEEee
Q 041491 221 SEKSLIGIGSFGTVYKGRFLD-GMEVAI------KVFHLQF--DGALKSFDAECEVLKSVRHRNLVKIISSCS 284 (467)
Q Consensus 221 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 284 (467)
.+.+.+| ||.||+|.+.. ..+||+ |..+... ......+.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3456676 99999998864 468888 6654321 122346778899999999999999877653
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=80.56 E-value=3.7 Score=30.63 Aligned_cols=46 Identities=11% Similarity=-0.018 Sum_probs=21.0
Q ss_pred cccccCCcCccCCCCccEEEcCCCcccCCCCcCccCCCCccEEEccC
Q 041491 8 ELSSVIPSTFWNLNSILSFDFSSNSLNGSLPLDIENMKVVVEINLSR 54 (467)
Q Consensus 8 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 54 (467)
.++.+-..+|.++++|+.+.|..+- +.+-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~v-~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPNI-GLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTTS-SCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCch-heEcHHHHhccCCccEEEEcC
Confidence 3444444455555555555554432 223334445555555444443
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=76.25 E-value=8.3 Score=28.65 Aligned_cols=46 Identities=22% Similarity=0.146 Sum_probs=25.2
Q ss_pred cccCCCCcCccCCCCccEEEccCCcCCCCCCCCcCCCCCCCEEeccC
Q 041491 32 SLNGSLPLDIENMKVVVEINLSRNYLTGDIPPTIGGLTNLQLLSLEN 78 (467)
Q Consensus 32 ~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~l~~L~~l~l~~ 78 (467)
.++.+-..+|.++++|+.+.+..+ ++..-...|.+|.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444456666666666666554 3334445566666666665544
No 453
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=41.29 E-value=67 Score=29.62 Aligned_cols=141 Identities=14% Similarity=0.085 Sum_probs=68.9
Q ss_pred CccCCccCcccceeEEEEEecCCCeEEEEEeecccccchHHHHHHHHHHHcCCCCCceeEEEE-----------------
Q 041491 220 FSEKSLIGIGSFGTVYKGRFLDGMEVAIKVFHLQFDGALKSFDAECEVLKSVRHRNLVKIISS----------------- 282 (467)
Q Consensus 220 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~----------------- 282 (467)
+..++....|.. .||.+.. ++..|+||-.. .-..+.+-.++...-.+.-|+..-+.-.
T Consensus 71 v~~I~~s~~Gst-gvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~ 145 (342)
T 1cja_A 71 FKGIERSEKGTE-GLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKS 145 (342)
T ss_dssp EEEEEECCSTTS-CEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSS
T ss_pred eeEEEeccCCCC-CeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhh
Confidence 444455566654 4555544 57889999431 1122223333333333444543222110
Q ss_pred -----eecCCeeeEEEecccCCCHHHhhhcC-CCCCCHHHHHHHHHHHH--HHHHH-HhcCCCCCcee-cCCCCCCeeec
Q 041491 283 -----CSNGNFEALVLEYMANGSLEKCLYSS-NGILDIFQRLSIMIDVA--LALEY-LHFGYSNPVVH-CDIKPSNVLLD 352 (467)
Q Consensus 283 -----~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~--~~l~~-LH~~~~~~ivH-~dlkp~NIll~ 352 (467)
....+...++|+|.+|..|...-... ...+... ...++. -++.. ++...+...+. .--.+.|||++
T Consensus 146 ~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~ 221 (342)
T 1cja_A 146 FRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLS 221 (342)
T ss_dssp SCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEE
T ss_pred hHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEe
Confidence 00122456999999986665432110 0012222 233322 22333 44332222222 23578999997
Q ss_pred CCC-cEEEeccccceecC
Q 041491 353 DDM-VAHLSDFGIAKLLN 369 (467)
Q Consensus 353 ~~~-~~kl~Dfg~a~~~~ 369 (467)
+++ .+.++|-+.+..-.
T Consensus 222 ~~n~~~~~IDhn~af~~~ 239 (342)
T 1cja_A 222 ERGATVVPIDSKIIPLDA 239 (342)
T ss_dssp SBTTCEEECSCCCCCCCS
T ss_pred CCCCeEEEEcCCccccCC
Confidence 755 48999999986543
No 454
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=38.30 E-value=1.4e+02 Score=29.39 Aligned_cols=140 Identities=15% Similarity=0.089 Sum_probs=90.8
Q ss_pred ccCcccceeEEEEEecCCCeEEEEEeecccc----cchHHHHHHHHHHHcCCCCCceeEEEEe-----------------
Q 041491 225 LIGIGSFGTVYKGRFLDGMEVAIKVFHLQFD----GALKSFDAECEVLKSVRHRNLVKIISSC----------------- 283 (467)
Q Consensus 225 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~----------------- 283 (467)
.+.-|--|.|-.+..--+-+++.|+++.... ...+..+.-..+.+ +|..+=++-+..
T Consensus 313 i~APGikGmVM~VFTLPSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Efsn~~fp~~Rfs~eLL 390 (578)
T 3eps_A 313 IEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEFENFVLEKRHISPALM 390 (578)
T ss_dssp EECSSCCCSSEEEEECTTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEEEEEEEEGGGBCHHHH
T ss_pred EECCCCCceEEEEEcCCCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhhhcccCchhhCCHHHH
Confidence 3677888999998777788999999975422 12223333333333 344444432211
Q ss_pred ------------ecCCeeeEEEeccc--CCCHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCe
Q 041491 284 ------------SNGNFEALVLEYMA--NGSLEKCLYSSNGILDIFQRLSIMIDVALALEYLHFGYSNPVVHCDIKPSNV 349 (467)
Q Consensus 284 ------------~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlkp~NI 349 (467)
.+++...|=.=|++ -..|.-++.+. +..++...+.+--.|++.|- ..+|.-||.=.+|+
T Consensus 391 ~EL~~~~ps~le~~gd~liIkHlYiERRMtPLNLYL~~a----~~~~~~~av~eYG~AIKqLA---aANIFPGDML~KNF 463 (578)
T 3eps_A 391 ELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQV----EGQQLRDAIEEYGNAIRQLA---AANIFPGDMLFKNF 463 (578)
T ss_dssp HHHHHHSGGGEEEETTEEEEEEEEEEECCEEHHHHHHHC----CTHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGE
T ss_pred HHHHHhCCccEEEcCCeeEeeeeeeeccccchhHHHhhC----CHHHHHHHHHHHHHHHHHHH---HhcCCCcccccccC
Confidence 11222221111111 12444455432 45677888899999999999 99999999999999
Q ss_pred eecCCCcEEEeccccceecCCCCc
Q 041491 350 LLDDDMVAHLSDFGIAKLLNGKES 373 (467)
Q Consensus 350 ll~~~~~~kl~Dfg~a~~~~~~~~ 373 (467)
=++..|+|..-|+.-...+.+-..
T Consensus 464 GVTRhgRVVFYDYDEI~ylTdcnF 487 (578)
T 3eps_A 464 GVTRHGRVVFYDYDEICYMTEVNF 487 (578)
T ss_dssp EECTTCCEEECCGGGCEESTTCEE
T ss_pred CccccceEEEecccceeeeccccc
Confidence 999999999999988777765443
No 455
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=32.86 E-value=23 Score=36.34 Aligned_cols=25 Identities=28% Similarity=0.260 Sum_probs=22.9
Q ss_pred cCCCCCCeeecCCCcEEEeccccce
Q 041491 342 CDIKPSNVLLDDDMVAHLSDFGIAK 366 (467)
Q Consensus 342 ~dlkp~NIll~~~~~~kl~Dfg~a~ 366 (467)
+|=.++|||++.+|++.=+|||.+-
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCcceEEeCCCCEEEEeehhhh
Confidence 5888999999999999999999874
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=22.95 E-value=46 Score=33.59 Aligned_cols=46 Identities=22% Similarity=0.146 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHH--HHHHHhcCCCCCceecCCCCCCeeecCCCcEEEeccccce
Q 041491 314 IFQRLSIMIDVAL--ALEYLHFGYSNPVVHCDIKPSNVLLDDDMVAHLSDFGIAK 366 (467)
Q Consensus 314 ~~~~~~i~~~i~~--~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~a~ 366 (467)
+..+..+++.+|- .+.|+= . | +|=.++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL---G--i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL---G--V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---T--C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee---e--c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3445556555443 234443 2 2 4778999999999999999999874
No 457
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=22.10 E-value=46 Score=36.16 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=23.0
Q ss_pred cCCCCCCeeecCCCcEEEeccccce
Q 041491 342 CDIKPSNVLLDDDMVAHLSDFGIAK 366 (467)
Q Consensus 342 ~dlkp~NIll~~~~~~kl~Dfg~a~ 366 (467)
+|=.++|||++.+|++.=+|||.+-
T Consensus 940 GDRH~~NILid~tG~v~HIDFG~~f 964 (1092)
T 2y3a_A 940 GDRHSDNIMVKKTGQLFHIDFGHIL 964 (1092)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred CCCCCccEEEecCCCEEEEeehhhh
Confidence 5888999999999999999999875
No 458
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=20.07 E-value=39 Score=36.09 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=22.7
Q ss_pred cCCCCCCeeecCCCcEEEeccccce
Q 041491 342 CDIKPSNVLLDDDMVAHLSDFGIAK 366 (467)
Q Consensus 342 ~dlkp~NIll~~~~~~kl~Dfg~a~ 366 (467)
+|=.++|||++.+|++.=+|||.+-
T Consensus 788 gDRH~~NILid~tG~v~HIDFG~~f 812 (940)
T 2wxf_A 788 GDRHSDNIMIRESGQLFHIDFGHFL 812 (940)
T ss_dssp CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred CCCCcccEEEecCCCEEEEeehhhh
Confidence 5888999999999999999999874
Done!