Query 041498
Match_columns 80
No_of_seqs 147 out of 1473
Neff 10.8
Searched_HMMs 13730
Date Mon Mar 25 12:59:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041498.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041498hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1r9oa_ a.104.1.1 (A:) Mammali 99.9 7.9E-24 5.8E-28 123.3 9.8 79 1-80 258-336 (467)
2 d3czha1 a.104.1.1 (A:40-502) V 99.9 2.3E-23 1.7E-27 120.9 9.8 79 1-80 257-335 (463)
3 d2ciba1 a.104.1.1 (A:5-449) Cy 99.9 1.7E-23 1.2E-27 122.1 8.5 79 1-80 238-316 (445)
4 d1tqna_ a.104.1.1 (A:) Mammali 99.9 6.6E-23 4.8E-27 119.8 10.1 79 1-80 264-342 (472)
5 d1po5a_ a.104.1.1 (A:) Mammali 99.9 3.4E-22 2.5E-26 116.6 9.1 78 2-80 258-335 (465)
6 d2ij2a1 a.104.1.1 (A:3-455) Cy 99.8 1.2E-20 8.8E-25 110.3 10.0 78 1-80 248-325 (453)
7 d1izoa_ a.104.1.1 (A:) Cytochr 99.7 8.2E-18 6E-22 97.4 5.8 61 2-80 224-284 (411)
8 d1n97a_ a.104.1.1 (A:) Cyp175a 99.6 7.7E-16 5.6E-20 88.7 7.1 61 1-80 207-267 (385)
9 d1n40a_ a.104.1.1 (A:) Cyp121 99.5 2.2E-14 1.6E-18 83.2 7.3 61 1-80 218-278 (395)
10 d1gwia_ a.104.1.1 (A:) Cyp154c 99.3 1.7E-12 1.3E-16 74.8 7.0 61 1-80 221-281 (403)
11 d1re9a_ a.104.1.1 (A:) Cytochr 99.2 3.3E-11 2.4E-15 69.7 8.2 61 1-80 224-284 (404)
12 d1z8oa1 a.104.1.1 (A:3-404) Cy 99.1 1.1E-10 7.8E-15 67.0 6.9 61 1-80 225-285 (402)
13 d1jfba_ a.104.1.1 (A:) Cytochr 99.1 3.7E-10 2.7E-14 64.7 7.5 61 1-80 221-281 (399)
14 d1cpta_ a.104.1.1 (A:) Cytochr 98.9 1.6E-09 1.2E-13 62.0 7.0 61 1-80 253-313 (428)
15 d1ue8a_ a.104.1.1 (A:) Cyp119 98.9 8.1E-10 5.9E-14 63.0 5.6 58 1-80 196-253 (367)
16 d1q5da_ a.104.1.1 (A:) Cytochr 98.9 2.2E-09 1.6E-13 61.2 6.6 61 1-80 225-285 (401)
17 d1ueda_ a.104.1.1 (A:) p450 mo 98.9 1.7E-09 1.3E-13 62.2 5.8 45 1-45 228-272 (403)
18 d1odoa_ a.104.1.1 (A:) Cyp154a 98.8 2.2E-08 1.6E-12 57.1 7.2 61 1-80 222-282 (401)
19 d1s1fa_ a.104.1.1 (A:) Cyp158a 98.7 2.7E-08 2E-12 56.8 6.3 59 3-80 222-280 (399)
20 d1io7a_ a.104.1.1 (A:) Cyp119 98.6 5.8E-08 4.3E-12 55.0 6.5 59 1-80 195-253 (366)
21 d1lfka_ a.104.1.1 (A:) p450 mo 98.0 1.6E-06 1.2E-10 49.4 3.1 60 1-79 218-277 (394)
22 d1mo6a2 d.48.1.1 (A:270-329) R 79.1 1.4 0.0001 18.3 3.7 23 27-49 37-59 (60)
23 d1xp8a2 d.48.1.1 (A:283-341) R 63.4 4 0.00029 16.8 3.6 22 27-48 36-57 (59)
24 d1u94a2 d.48.1.1 (A:269-328) R 55.4 6.1 0.00044 16.3 3.8 22 27-48 37-58 (60)
25 d1vcoa2 c.37.1.10 (A:11-282) C 39.6 7.7 0.00056 21.1 1.7 38 35-72 116-160 (272)
26 d1s1ma2 c.37.1.10 (A:1-266) CT 37.5 16 0.0012 19.7 2.7 36 35-72 117-159 (266)
27 d1ssqa_ b.81.1.6 (A:) Serine a 33.1 23 0.0017 18.4 3.0 17 36-52 4-20 (241)
28 d2hwna1 a.31.1.1 (A:5-43) cAMP 31.9 13 0.00095 13.8 1.3 13 67-79 9-21 (39)
29 d1uhua_ a.61.1.6 (A:) Product 31.3 7.6 0.00055 17.9 0.7 17 62-80 79-95 (105)
30 d1mn8a_ a.61.1.6 (A:) MMLV mat 30.1 9 0.00065 17.3 0.8 17 62-80 76-92 (95)
31 d1ks9a1 a.100.1.7 (A:168-291) 26.6 12 0.00084 17.2 0.9 29 29-57 28-56 (124)
32 d1iiea_ a.109.1.1 (A:) Class I 22.1 19 0.0014 15.4 1.1 13 23-35 52-64 (75)
33 d1ev0a_ d.71.1.1 (A:) Cell div 20.7 10 0.00076 15.5 0.1 20 33-52 4-23 (58)
No 1
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=7.9e-24 Score=123.33 Aligned_cols=79 Identities=29% Similarity=0.400 Sum_probs=74.9
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++.+.+..+++||++||+.++.|++++|++||++++++++|++.+.++. ..++..++.+|||+++||+|++|++|+
T Consensus 258 ~~~~i~~~~~~~~~Ag~dTTa~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~l~yL~a~i~E~lRl~p~ 336 (467)
T d1r9oa_ 258 TIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN-RSPCMQDRSHMPYTDAVVHEVQRYIDL 336 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS-SCCCGGGGGGCHHHHHHHHHHHHHHTS
T ss_pred chhHHHHHHHHHHHcccccchhHHHHHHHHhhcCchHHHHHHhhhhhhcCCC-CCCcHHHhhhhhhhhhhcccccccccc
Confidence 3688999999999999999999999999999999999999999999998877 789999999999999999999999986
No 2
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=2.3e-23 Score=120.89 Aligned_cols=79 Identities=25% Similarity=0.415 Sum_probs=75.0
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..+++||++||+.++.|++++|++||++++++++|++.+.+.. ..++++++.+|||+++|++|++|++|+
T Consensus 257 s~~~i~~~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~l~~lp~l~a~~~Et~Rl~~~ 335 (463)
T d3czha1 257 SKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPN-GKPSWDDKCKMPYTEAVLHEVLRFCNI 335 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS-SCCCGGGGGGCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHhhhhccchhhhhhHHHhhccCcHHHHHHHHHHHhhcCCC-CCCCHHHHHhhhhcccccceeeeeecc
Confidence 4689999999999999999999999999999999999999999999998877 778999999999999999999999875
No 3
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.89 E-value=1.7e-23 Score=122.11 Aligned_cols=79 Identities=27% Similarity=0.367 Sum_probs=75.1
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++.+.+..+++||++||+.++.|++++|++||++++++++|++.+.+.. ..++++++.++||+++|++|++|++|+
T Consensus 238 s~~ei~~~~~~ll~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~~~~l~~lp~L~a~i~E~lRl~p~ 316 (445)
T d2ciba1 238 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG-RSVSFHALRQIPQLENVLKETLRLHPP 316 (445)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGC-CCHHHHTTSCCHHHHHHHHHHHHHSCS
T ss_pred Ccchhhhhhhhhhhhccccchhhccccccccccccccccccccccccccccc-ccchhhhcccchhhccccccccccccc
Confidence 4789999999999999999999999999999999999999999999998876 778999999999999999999999986
No 4
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=6.6e-23 Score=119.76 Aligned_cols=79 Identities=27% Similarity=0.349 Sum_probs=75.1
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..+++||++|++.++.|++++|++||++++++++|+..+++.. ..++.+++.++||+++|++|++|++||
T Consensus 264 s~~ei~~~~l~l~~Ag~~tta~~l~~~l~~L~~~Pe~~~klr~Ei~~~~~~~-~~~~~~~l~~~~~l~a~i~E~lRl~p~ 342 (472)
T d1tqna_ 264 SDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNK-APPTYDTVLQMEYLDMVVNETLRLFPI 342 (472)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSTTT-CCCCHHHHHHCHHHHHHHHHHHHHCCT
T ss_pred hhhHHHhhhhhhhhcccccccccceeeccccccCccccccccceeheecccc-ccchHHHhhccccccceeeeccccCCc
Confidence 4789999999999999999999999999999999999999999999999887 778899999999999999999999986
No 5
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.87 E-value=3.4e-22 Score=116.55 Aligned_cols=78 Identities=27% Similarity=0.414 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 2 YICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 2 ~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
++++...+..+++||++||+.++.|++++++++|++++++++|++...+.. ..++.+++++|||+++|++|++|++|+
T Consensus 258 ~~~i~~~~~~~~~Ag~~tta~~l~~~l~~l~~~p~~~~kl~~ei~~~~~~~-~~~~~~~~~~lp~l~avi~EtlRl~~~ 335 (465)
T d1po5a_ 258 HQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSH-RPPALDDRAKMPYTDAVIHEIQRLGDL 335 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSS-SCCCGGGGGGCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHhhccccchhhhHHHHHHHhhhhhHHHHHHHHHHHHcCcc-cCcchhhhhhceeeecccccccccccc
Confidence 578889999999999999999999999999999999999999999998887 788999999999999999999999985
No 6
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]}
Probab=99.84 E-value=1.2e-20 Score=110.25 Aligned_cols=78 Identities=21% Similarity=0.369 Sum_probs=72.4
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..+++||++||+.++.|++++|+.||+++.++++|++...+.. ..+.+++.++||++||++|++|++|+
T Consensus 248 s~~ei~~~~~~~l~ag~~tta~~l~~~l~~L~~~p~~~~~~~~e~~~~~~~~--~~~~~~l~~~p~L~a~i~E~lR~~p~ 325 (453)
T d2ij2a1 248 DDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP--VPSYKQVKQLKYVGMVLNEALRLWPT 325 (453)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSS--SCCHHHHHTCHHHHHHHHHHHHHSCS
T ss_pred hhhHHHhhhccccccccccchhhhhcchhhhhcccccchhhhhhhhhhhccc--cCChhhhhcCCcchhhhhhhhccccc
Confidence 4678999999999999999999999999999999999999999999876654 57899999999999999999999985
No 7
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]}
Probab=99.71 E-value=8.2e-18 Score=97.42 Aligned_cols=61 Identities=13% Similarity=-0.006 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 2 YICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 2 ~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
++++....+.+++||++||+.++.|++++|++||++++++++| ++||+++||+|++|++||
T Consensus 224 ~~~~~~~~~~~l~ag~~tts~~l~~~l~~L~~~P~vq~kl~~e------------------~~~~l~a~i~E~lRl~p~ 284 (411)
T d1izoa_ 224 DSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRSG------------------NSREREMFVQEVRRYYPF 284 (411)
T ss_dssp CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC------------------CHHHHHHHHHHHHHHSCC
T ss_pred ccchhhhhhhhhhcccccchHHHHHHHHHHHhccccccccccc------------------ccchHHHHHHHHHHhhhc
Confidence 4556666667788999999999999999999999999999864 689999999999999986
No 8
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Probab=99.62 E-value=7.7e-16 Score=88.71 Aligned_cols=61 Identities=23% Similarity=0.335 Sum_probs=56.1
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++.+.+..+++||+|||+.+++|+++++++||++++++++|+.. ..++++|++|++||
T Consensus 207 ~~~ei~~~~~~~l~ag~dTt~~~l~~~l~~L~~~P~v~~~l~~E~~~-------------------~~a~i~EtlRl~p~ 267 (385)
T d1n97a_ 207 PRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEA-------------------ALAAFQEALRLYPP 267 (385)
T ss_dssp CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHH-------------------HHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHHHhhhccchhhhhhhhhHhhhhccccccccccccc-------------------ccceeecccccccc
Confidence 46899999999999999999999999999999999999999998765 34789999999986
No 9
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.52 E-value=2.2e-14 Score=83.20 Aligned_cols=61 Identities=13% Similarity=0.167 Sum_probs=55.1
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..+++||+|||+.+++|++++|++||++++++++|. .++.++|+|++|++||
T Consensus 218 s~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~-------------------~~~~~~i~E~lRl~~p 278 (395)
T d1n40a_ 218 SDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP-------------------ELIPAGVEELLRINLS 278 (395)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-------------------GGHHHHHHHHHHTCCC
T ss_pred ccchhhHHHHHHHhhhcchhhhhhHHHHHHHhhCccccccccchh-------------------hhhhhhhhhhcccccc
Confidence 467889999999999999999999999999999999999998763 3678999999999865
No 10
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]}
Probab=99.34 E-value=1.7e-12 Score=74.80 Aligned_cols=61 Identities=25% Similarity=0.247 Sum_probs=54.6
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..++++|++||+.++.|.++.++++|+.++++++ +++|++++|+|++|++||
T Consensus 221 ~~~~~~~~~~~~~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~-------------------~~~~l~~~i~E~lRl~pp 281 (403)
T d1gwia_ 221 TDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLS-------------------GEAEWSAVVEETLRFSTP 281 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHT-------------------TSSCHHHHHHHHHHHSCS
T ss_pred hhhhHHHHHHHHHHccccchhhhhhhhhhhhhhhhHHHHHHHH-------------------hhhcchhhccchhhhcCc
Confidence 3567888899999999999999999999999999999999874 356899999999999986
No 11
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]}
Probab=99.23 E-value=3.3e-11 Score=69.71 Aligned_cols=61 Identities=15% Similarity=0.125 Sum_probs=54.6
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..+++||++||+.+++|.++.|++||++++++++ +..++.++|+|++|++||
T Consensus 224 ~~~e~~~~~~~l~~ag~eTt~~~l~~~~~~L~~~p~~~~~l~~-------------------~~~~~~~~v~E~lR~~~p 284 (404)
T d1re9a_ 224 TSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIE-------------------RPERIPAACEELLRRFSL 284 (404)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHCHHHHHHHHH-------------------CGGGHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhhHHHHHHHh-------------------hhhccccccccccccccc
Confidence 4678999999999999999999999999999999999887765 346789999999999986
No 12
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=99.13 E-value=1.1e-10 Score=67.00 Aligned_cols=61 Identities=16% Similarity=0.139 Sum_probs=53.5
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..+++||++||+.++.|++++++++|++++++++|+. ++..++.|.+|+.|+
T Consensus 225 ~~~~~~~~~~~~i~aG~dTt~~~l~~~l~~l~~~P~~~~~l~~e~~-------------------~~~~~~~~~~~~~~~ 285 (402)
T d1z8oa1 225 SADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS-------------------ALPNAVEEILRYIAP 285 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------GHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHhcccccchhhHHHHHHHHHhhhhHHHHHHhcccc-------------------ccccchhhhhhhhhc
Confidence 4688999999999999999999999999999999999999998642 467778888887764
No 13
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]}
Probab=99.07 E-value=3.7e-10 Score=64.70 Aligned_cols=61 Identities=11% Similarity=0.132 Sum_probs=53.0
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..++++|++||+.++.|++++|++||++++++++| ..+..+++.|.+|++|+
T Consensus 221 ~~~ei~~~~~~~~~ag~~tt~~~l~~~~~~L~~~pe~~~~L~~e-------------------~~~~~~~~~e~lr~~~~ 281 (399)
T d1jfba_ 221 DKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN-------------------PSLAPQFVEELCRYHTA 281 (399)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC-------------------GGGHHHHHHHHHHHSCS
T ss_pred ccchhhhhhhhhhhhccchhhhHHHHHHHHHhhchHHHHHHhcc-------------------cccccceeeeccccccc
Confidence 46788999999999999999999999999999999999999864 23567788899988864
No 14
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]}
Probab=98.95 E-value=1.6e-09 Score=62.03 Aligned_cols=61 Identities=13% Similarity=0.156 Sum_probs=53.6
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..++++|++|++.++.|.+++|+++|+.+++++++ ..|+.++++|++|++||
T Consensus 253 ~~~~~~~~~~~~l~~g~~tt~~~l~~~~~~L~~~p~~~~~~~~~-------------------~~~~~~~~ee~lr~~pp 313 (428)
T d1cpta_ 253 DDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD-------------------PALIPRLVDEAVRWTAP 313 (428)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC-------------------GGGHHHHHHHHHHHHCC
T ss_pred chhHhHHHHHhhhhcccccccchhhhhhhhhhcChHhhhhhhhc-------------------ccccccchhhccccccc
Confidence 35678899999999999999999999999999999998887653 35788999999999886
No 15
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=98.94 E-value=8.1e-10 Score=63.00 Aligned_cols=58 Identities=10% Similarity=-0.023 Sum_probs=47.8
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..+++||+|||+.++.|+++.++++|+....... +..++|+|++|++||
T Consensus 196 ~~~e~~~~~~~~~~ag~ett~~~l~~~~~~l~~~~~~~~~~~~----------------------~~~~ai~E~lR~~p~ 253 (367)
T d1ue8a_ 196 SELEKEGYFILLMIAGNETTTNLIGNAIEDFTLYNSWDYVREK----------------------GALKAVEEALRFSPP 253 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH----------------------CSHHHHHHHHHHSCS
T ss_pred CHHHhhhhhhheeeeccccccccccchHHHhhhccccchhhhh----------------------hhHHHHHhhhhhccc
Confidence 4678999999999999999999999999999999875443322 123679999999986
No 16
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]}
Probab=98.91 E-value=2.2e-09 Score=61.22 Aligned_cols=61 Identities=20% Similarity=0.343 Sum_probs=50.4
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..+++||++||+.++.|++++|+.||++++++++|.. +...++.|.+|+.+|
T Consensus 225 ~~~~i~~~~~~~l~ag~etta~~l~~~l~~L~~~p~~~e~l~~~~~-------------------~~~~~~~~~~r~~~~ 285 (401)
T d1q5da_ 225 STKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEPG-------------------LMRNALDEVLRFDNI 285 (401)
T ss_dssp CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------GHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHhcccchhhhHHHHHHHHHHhhHHHHHHhhcccc-------------------cccccccchhhcccc
Confidence 3578889999999999999999999999999999999999986532 344567777777654
No 17
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]}
Probab=98.90 E-value=1.7e-09 Score=62.20 Aligned_cols=45 Identities=16% Similarity=0.104 Sum_probs=41.8
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHH
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEI 45 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~ 45 (80)
+++++...+..+++||+|||+.+++|++++|++||+++.+++++.
T Consensus 228 s~~~l~~~~~~~l~aG~dTt~~~l~~~l~~L~~~p~~~~~~~~~~ 272 (403)
T d1ueda_ 228 TDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESP 272 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCH
T ss_pred cHHHHHHHHHHHHhcchhhHHHHHHHHHHHHhhccchhhhhhhhc
Confidence 578999999999999999999999999999999999999988754
No 18
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]}
Probab=98.75 E-value=2.2e-08 Score=57.07 Aligned_cols=61 Identities=21% Similarity=0.225 Sum_probs=52.3
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++.+.+..++++|+++++.++.|.++.++.+|..+.+.+.+ ..+..++++|++|++||
T Consensus 222 ~~~ei~~~~~~l~~~g~~t~~~~~~~~~~~l~~~~~~~~~~~~~-------------------~~~~~~~i~e~~R~~p~ 282 (401)
T d1odoa_ 222 SPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKG-------------------EVTWADVVEETLRHEPA 282 (401)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHT-------------------SSCHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHHhccccchhhhhhhhhcccccchhhhhhcccc-------------------ccccceeeccccccccc
Confidence 35789999999999999999999999999999999988776643 23456799999999986
No 19
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]}
Probab=98.69 E-value=2.7e-08 Score=56.84 Aligned_cols=59 Identities=14% Similarity=0.224 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 3 ICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 3 ~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
++....+..++++|.+||+.++.|+++++.+||+.+.+++++. .+...++.|.+|+.|+
T Consensus 222 ~~~~~~~~~~~~ag~~tT~~~l~~~l~~l~~~p~~~~~~~~~~-------------------~~~~~~~~e~~r~~p~ 280 (399)
T d1s1fa_ 222 LSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEP-------------------EIRPRAIDELLRWIPH 280 (399)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSHHHHHHHHHCG-------------------GGHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhhcccccccchhhhhhhhhhCchhhhhhhhhh-------------------cccccccccccccccc
Confidence 4566777788899999999999999999999999999988753 2456788999998875
No 20
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.63 E-value=5.8e-08 Score=55.03 Aligned_cols=59 Identities=12% Similarity=0.089 Sum_probs=48.0
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p~ 80 (80)
+++++...+..+++||++||+.++.|.++.+..+|+.+.+... .+...++.|.+|+.|+
T Consensus 195 ~~~e~~~~~~~~l~aG~~tt~~~l~~~l~~l~~~~~~~~~~~~---------------------~l~~~~~ee~~r~~~~ 253 (366)
T d1io7a_ 195 SDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIREE---------------------NLYLKAIEEALRYSPP 253 (366)
T ss_dssp CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTCHHHHHHH---------------------TCHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHHHhccchhHHHHHHHHHHhhccccccccccc---------------------chhhhhhhhhhhcccc
Confidence 5789999999999999999999999999999999987655432 2355667788887764
No 21
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=98.03 E-value=1.6e-06 Score=49.40 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=46.4
Q ss_pred ChHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhCCCCCCCCHHhhhcChhHHHHHHHHhcCCC
Q 041498 1 MYICLFHALQNVFAVGTNTSAATMVWSMTYLMNNPRAMKKVQMEIRSLIGGNKGFVNEDDVQELHYLKAVVKETIRLQP 79 (80)
Q Consensus 1 ~~~~i~~~~~~~~~ag~~tt~~~~~~~~~~l~~~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~~i~E~lRl~p 79 (80)
+++++...+..++++|.+||+.++.|.++.++.+|+.+.+..++ ...+..++.|.+|+.+
T Consensus 218 ~~~el~~~~~~~~~ag~~tt~~~~~~~~~~l~~~~~~~~~~~~~-------------------~~~~~~~~~e~~r~~~ 277 (394)
T d1lfka_ 218 TDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGD-------------------EQSAQRAVDELIRYLT 277 (394)
T ss_dssp CHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSC-------------------HHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHhhccchHHHHHHHHHHhhcchhhhhhhccc-------------------ccccccchhccccccc
Confidence 46789999999999999999999999999999999866553321 1234566777777654
No 22
>d1mo6a2 d.48.1.1 (A:270-329) RecA protein, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=79.08 E-value=1.4 Score=18.28 Aligned_cols=23 Identities=13% Similarity=0.416 Sum_probs=18.2
Q ss_pred HHHHHHhChHHHHHHHHHHHHhh
Q 041498 27 SMTYLMNNPRAMKKVQMEIRSLI 49 (80)
Q Consensus 27 ~~~~l~~~p~~~~~~~~e~~~~~ 49 (80)
+..+|..||++.+.+...++..+
T Consensus 37 a~~~L~enpel~~eie~~ir~~l 59 (60)
T d1mo6a2 37 ARNFLVENADVADEIEKKIKEKL 59 (60)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCHHHHHHHHHHHHHHc
Confidence 34678899999999988877643
No 23
>d1xp8a2 d.48.1.1 (A:283-341) RecA protein, C-terminal domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=63.43 E-value=4 Score=16.77 Aligned_cols=22 Identities=9% Similarity=0.410 Sum_probs=17.3
Q ss_pred HHHHHHhChHHHHHHHHHHHHh
Q 041498 27 SMTYLMNNPRAMKKVQMEIRSL 48 (80)
Q Consensus 27 ~~~~l~~~p~~~~~~~~e~~~~ 48 (80)
+-.+|..||++.+.+.+.+...
T Consensus 36 a~~~L~enpel~~eie~~i~~~ 57 (59)
T d1xp8a2 36 TIAYIAERPEMEQEIRDRVMAA 57 (59)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHHHHHH
Confidence 3467889999999888877654
No 24
>d1u94a2 d.48.1.1 (A:269-328) RecA protein, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=55.36 E-value=6.1 Score=16.25 Aligned_cols=22 Identities=27% Similarity=0.647 Sum_probs=17.1
Q ss_pred HHHHHHhChHHHHHHHHHHHHh
Q 041498 27 SMTYLMNNPRAMKKVQMEIRSL 48 (80)
Q Consensus 27 ~~~~l~~~p~~~~~~~~e~~~~ 48 (80)
+..+|..||++.+.+.+.++..
T Consensus 37 ~~~~L~enpel~~eie~~ire~ 58 (60)
T d1u94a2 37 ATAWLKDNPETAKEIEKKVREL 58 (60)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHHHHHH
Confidence 3467889999999988877653
No 25
>d1vcoa2 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=39.59 E-value=7.7 Score=21.05 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHHhhCCCCCC-------CCHHhhhcChhHHHHHH
Q 041498 35 PRAMKKVQMEIRSLIGGNKGF-------VNEDDVQELHYLKAVVK 72 (80)
Q Consensus 35 p~~~~~~~~e~~~~~~~~~~~-------~~~~~~~~~~~l~~~i~ 72 (80)
|++.+.+++.+..+....... =+.-|++++||+.|+-+
T Consensus 116 PHvTdeIk~~I~~~a~~~~~Di~ivEiGGTVGDiEs~pFlEAiRQ 160 (272)
T d1vcoa2 116 PHITDEIKERIRKVAEEQKAEIVVVEVGGTVGDIESLPFLEAIRQ 160 (272)
T ss_dssp THHHHHHHHHHHHHHHHTTCSEEEEEECSCTTSSTTHHHHHHHHT
T ss_pred CcchHHHHHHHHhcccCCCCCEEEEeccceecccchhhHHHHHHH
Confidence 677777776665443222111 14567889999987643
No 26
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=37.47 E-value=16 Score=19.71 Aligned_cols=36 Identities=19% Similarity=0.386 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHHhhCCC-------CCCCCHHhhhcChhHHHHHH
Q 041498 35 PRAMKKVQMEIRSLIGGN-------KGFVNEDDVQELHYLKAVVK 72 (80)
Q Consensus 35 p~~~~~~~~e~~~~~~~~-------~~~~~~~~~~~~~~l~~~i~ 72 (80)
|++-+.+++.+....... ++ +..|++++||+.|+-+
T Consensus 117 PHiTdeIk~~I~~~~~~~Di~ivEiGG--TVGDIEs~pFlEAiRQ 159 (266)
T d1s1ma2 117 PHITNAIKERVLEGGEGHDVVLVEIGG--TVGDIESLPFLEAIRQ 159 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEECS--CTTSSTTHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCCCCCEEEEeccc--eechhhcchHHHHHHH
Confidence 556666665554443322 11 4567889999988755
No 27
>d1ssqa_ b.81.1.6 (A:) Serine acetyltransferase {Haemophilus influenzae [TaxId: 727]}
Probab=33.14 E-value=23 Score=18.43 Aligned_cols=17 Identities=12% Similarity=0.274 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHhhCCC
Q 041498 36 RAMKKVQMEIRSLIGGN 52 (80)
Q Consensus 36 ~~~~~~~~e~~~~~~~~ 52 (80)
++++++++|.+....++
T Consensus 4 ~iW~~i~~ea~~~~~~E 20 (241)
T d1ssqa_ 4 DVWQHIRQEAKELAENE 20 (241)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 46667777666655443
No 28
>d2hwna1 a.31.1.1 (A:5-43) cAMP-dependent protein kinase type II regulatory subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.86 E-value=13 Score=13.79 Aligned_cols=13 Identities=38% Similarity=0.590 Sum_probs=8.2
Q ss_pred HHHHHHHHhcCCC
Q 041498 67 LKAVVKETIRLQP 79 (80)
Q Consensus 67 l~~~i~E~lRl~p 79 (80)
+....+|.+|-.|
T Consensus 9 L~~ftrevLR~qP 21 (39)
T d2hwna1 9 LQGYTVEVLRQQP 21 (39)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCC
Confidence 5566677776554
No 29
>d1uhua_ a.61.1.6 (A:) Product of RIKEN cDNA 3110009e22 {Unclassified, murine endogenous retrovirus [TaxId: 12908]}
Probab=31.27 E-value=7.6 Score=17.89 Aligned_cols=17 Identities=6% Similarity=0.202 Sum_probs=11.5
Q ss_pred hcChhHHHHHHHHhcCCCC
Q 041498 62 QELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 62 ~~~~~l~~~i~E~lRl~p~ 80 (80)
++.||+... +.|+..||
T Consensus 79 DqvPYI~tw--~~La~~PP 95 (105)
T d1uhua_ 79 DQQPYITVW--QDLVQNSP 95 (105)
T ss_dssp TTHHHHHHH--HHHHHTCC
T ss_pred CcCcchHHH--HHHHHCCC
Confidence 477888766 66666654
No 30
>d1mn8a_ a.61.1.6 (A:) MMLV matrix protein {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=30.10 E-value=9 Score=17.32 Aligned_cols=17 Identities=18% Similarity=0.534 Sum_probs=11.4
Q ss_pred hcChhHHHHHHHHhcCCCC
Q 041498 62 QELHYLKAVVKETIRLQPT 80 (80)
Q Consensus 62 ~~~~~l~~~i~E~lRl~p~ 80 (80)
++.||+... +.|+..||
T Consensus 76 DQvPYI~tw--~~La~~PP 92 (95)
T d1mn8a_ 76 DQVPYIVTW--EALAFDPP 92 (95)
T ss_dssp GGHHHHHHH--HHHHHSCC
T ss_pred CccchHHHH--HHHHHCCC
Confidence 477888766 56666654
No 31
>d1ks9a1 a.100.1.7 (A:168-291) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}
Probab=26.61 E-value=12 Score=17.19 Aligned_cols=29 Identities=14% Similarity=0.251 Sum_probs=17.8
Q ss_pred HHHHhChHHHHHHHHHHHHhhCCCCCCCC
Q 041498 29 TYLMNNPRAMKKVQMEIRSLIGGNKGFVN 57 (80)
Q Consensus 29 ~~l~~~p~~~~~~~~e~~~~~~~~~~~~~ 57 (80)
..+..+|+....+..|+..+....+-.+.
T Consensus 28 g~l~~~~~~~~~l~~E~~~va~a~g~~~~ 56 (124)
T d1ks9a1 28 GELRHHPQEIMQICEEVAAVIEREGHHTS 56 (124)
T ss_dssp GGGGGCHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred hHHHhCHHHHHHHHHHHHHHHHHcCCCCc
Confidence 45567787777777777766554333333
No 32
>d1iiea_ a.109.1.1 (A:) Class II MHC-associated invariant chain ectoplasmic trimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.13 E-value=19 Score=15.40 Aligned_cols=13 Identities=8% Similarity=0.243 Sum_probs=9.8
Q ss_pred HHHHHHHHHHhCh
Q 041498 23 TMVWSMTYLMNNP 35 (80)
Q Consensus 23 ~~~~~~~~l~~~p 35 (80)
+--|.++.++++|
T Consensus 52 M~~WLlFeMaq~~ 64 (75)
T d1iiea_ 52 MHHWLLFEMSRHS 64 (75)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhCC
Confidence 3458889998875
No 33
>d1ev0a_ d.71.1.1 (A:) Cell division protein MinE topological specificity domain {Escherichia coli [TaxId: 562]}
Probab=20.74 E-value=10 Score=15.46 Aligned_cols=20 Identities=15% Similarity=0.305 Sum_probs=15.0
Q ss_pred hChHHHHHHHHHHHHhhCCC
Q 041498 33 NNPRAMKKVQMEIRSLIGGN 52 (80)
Q Consensus 33 ~~p~~~~~~~~e~~~~~~~~ 52 (80)
..|+..-.+++|+..+++..
T Consensus 4 ~~PDyLp~Lq~eil~VI~Ky 23 (58)
T d1ev0a_ 4 AEPHYLPQLRKDILEVICKY 23 (58)
T ss_dssp GTTSSHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHh
Confidence 35777788888888887654
Done!