BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041500
(157 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 338
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 79/123 (64%), Gaps = 6/123 (4%)
Query: 34 KSIDKS--KESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDV 91
K+I +S + S+ PRF ENLE NK+++ R+ ++ K GCTP QLALAWV HQG DV
Sbjct: 216 KAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDV 275
Query: 92 CPIPGTTKIENLNQNIKALSVKLSPEEMAELESIASADAVRG---HRYGGVTPTYEDSET 148
PIPGTTKI+NL+ N+ AL VKL+ E++ E+ D V G H VT ++ + T
Sbjct: 276 VPIPGTTKIKNLHNNVGALKVKLTKEDLKEISDAVPLDEVAGESIHEVIAVT-NWKFANT 334
Query: 149 PPV 151
PP+
Sbjct: 335 PPL 337
>pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 79/123 (64%), Gaps = 6/123 (4%)
Query: 34 KSIDKS--KESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDV 91
K+I +S + S+ PRF ENLE NK+++ R+ ++ K GCTP QLALAWV HQG DV
Sbjct: 216 KAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDV 275
Query: 92 CPIPGTTKIENLNQNIKALSVKLSPEEMAELESIASADAVRG---HRYGGVTPTYEDSET 148
PIPGTTKI+NL+ N+ AL VKL+ E++ E+ D V G H VT ++ + T
Sbjct: 276 VPIPGTTKIKNLHNNVGALKVKLTKEDLKEISDAVPLDEVAGESIHEVIAVT-NWKFANT 334
Query: 149 PPV 151
PP+
Sbjct: 335 PPL 337
>pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 106 bits (265), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 79/123 (64%), Gaps = 6/123 (4%)
Query: 34 KSIDKS--KESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDV 91
K+I +S + S+ PRF ENLE NK+++ R+ ++ K GCTP QLALAWV HQG DV
Sbjct: 215 KAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDV 274
Query: 92 CPIPGTTKIENLNQNIKALSVKLSPEEMAELESIASADAVRG---HRYGGVTPTYEDSET 148
PIPGTTKI+NL+ N+ AL VKL+ E++ E+ D V G H VT ++ + T
Sbjct: 275 VPIPGTTKIKNLHNNVGALKVKLTKEDLKEISDAVPLDEVAGESIHEVIAVT-NWKFANT 333
Query: 149 PPV 151
PP+
Sbjct: 334 PPL 336
>pdb|3V0S|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 78/123 (63%), Gaps = 6/123 (4%)
Query: 34 KSIDKS--KESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDV 91
K+I +S + S+ PRF ENLE NK+++ R+ ++ K GCTP QLALAWV HQG DV
Sbjct: 215 KAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDV 274
Query: 92 CPIPGTTKIENLNQNIKALSVKLSPEEMAELESIASADAVRG---HRYGGVTPTYEDSET 148
PIPGTTKI+NL+ N+ AL V L+ E++ E+ D V G H VT ++ + T
Sbjct: 275 VPIPGTTKIKNLHNNVGALKVXLTKEDLKEISDAVPLDEVAGESIHEVIAVT-NWKFANT 333
Query: 149 PPV 151
PP+
Sbjct: 334 PPL 336
>pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph
pdb|1LQA|B Chain B, Tas Protein From Escherichia Coli In Complex With Nadph
Length = 346
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 39 SKESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTT 98
++ +LF RF + E +K +IA + G P+Q+ALA+V Q + G T
Sbjct: 254 ARNTLF---SRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGAT 310
Query: 99 KIENLNQNIKALSVKLSPEEMAELESI 125
++ L NI++L ++LS + +AE+E++
Sbjct: 311 TMDQLKTNIESLHLELSEDVLAEIEAV 337
>pdb|1VP5|A Chain A, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase
(tm1009) From Thermotoga Maritima At 2.40 A Resolution
pdb|1VP5|B Chain B, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase
(tm1009) From Thermotoga Maritima At 2.40 A Resolution
Length = 298
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 38 KSKESLFLHQPRFQPENL----EHNKKLFER--VNEIAVKKGCTPSQLALAWVHHQGNDV 91
+ +E F+ QPE E K +F+ + IA K G T +Q+ L W+ +G +
Sbjct: 183 RQEEIEFMRNYNIQPEAWGPFAEGRKNIFQNGVLRSIAEKYGKTVAQVILRWLTQKG--I 240
Query: 92 CPIPGTTKIENLNQNIKALSVKLSPEEMAELESIASAD 129
IP T + E + +NI +L+ E+M E IA+ D
Sbjct: 241 VAIPKTVRRERMKENISIFDFELTQEDM---EKIATLD 275
>pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And
Essential Gene Of Salmonella Typhimurium
pdb|3ERP|B Chain B, Structure Of Idp01002, A Putative Oxidoreductase From And
Essential Gene Of Salmonella Typhimurium
Length = 353
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 50 FQPENLEHNK-KLFERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIK 108
+PE + +K + R+NE+A ++G SQ+ALAWV N + G +K + +
Sbjct: 271 LKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVG 330
Query: 109 ALS-VKLSPEEMAELESI 125
L+ + S E AE+++I
Sbjct: 331 MLANRRFSAAECAEIDAI 348
>pdb|1ZGD|A Chain A, Chalcone Reductase Complexed With Nadp+ At 1.7 Angstrom
Resolution
pdb|1ZGD|B Chain B, Chalcone Reductase Complexed With Nadp+ At 1.7 Angstrom
Resolution
Length = 312
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 63 ERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAEL 122
+ + EIA G + +Q++L W++ QG V +P + E +NQN++ L+ E+ ++
Sbjct: 232 DMLKEIADAHGKSVAQISLRWLYEQG--VTFVPKSYDKERMNQNLRIFDWSLTKEDHEKI 289
Query: 123 ESIASADAVRGHRYGGVTPTYED 145
I + G G+ Y+D
Sbjct: 290 AQIKQNRLIPGPTKPGLNDLYDD 312
>pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|B Chain B, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|C Chain C, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|D Chain D, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|E Chain E, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|F Chain F, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|G Chain G, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|H Chain H, Crystal Structure Of Yghz From E. Coli
pdb|4AST|A Chain A, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|B Chain B, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|C Chain C, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|D Chain D, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|E Chain E, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|F Chain F, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|G Chain G, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|H Chain H, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
Length = 346
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 56 EHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKAL-SVKL 114
E N +NE+A ++G + +Q+AL+W+ + G ++ E L +N++AL ++
Sbjct: 261 EANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTF 320
Query: 115 SPEEMAELE 123
S +E+A+++
Sbjct: 321 STKELAQID 329
>pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|B Chain B, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|C Chain C, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|D Chain D, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|E Chain E, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|F Chain F, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|G Chain G, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|H Chain H, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
Length = 366
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 56 EHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKAL-SVKL 114
E N +NE+A ++G + +Q+AL+W+ + G ++ E L +N++AL ++
Sbjct: 281 EANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTF 340
Query: 115 SPEEMAELE 123
S +E+A+++
Sbjct: 341 STKELAQID 349
>pdb|3LUT|A Chain A, A Structural Model For The Full-Length Shaker Potassium
Channel Kv1.2
Length = 367
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 30 HVNVKSIDKSKESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGN 89
++K K+ + + R Q L+ + + ER+ GCT QLA+AW
Sbjct: 264 RASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERL-------GCTLPQLAIAWCLRNEG 316
Query: 90 DVCPIPGTTKIENLNQNIKALSV--KLSPEEMAELESI 125
+ G + E L +NI A+ V KLS + E++SI
Sbjct: 317 VSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 354
>pdb|2A79|A Chain A, Mammalian Shaker Kv1.2 Potassium Channel- Beta Subunit
Complex
pdb|2R9R|A Chain A, Shaker Family Voltage Dependent Potassium Channel
(Kv1.2-Kv2.1 Paddle Chimera Channel) In Association With
Beta Subunit
pdb|2R9R|G Chain G, Shaker Family Voltage Dependent Potassium Channel
(Kv1.2-Kv2.1 Paddle Chimera Channel) In Association With
Beta Subunit
pdb|3LNM|A Chain A, F233w Mutant Of The Kv2.1 Paddle-Kv1.2 Chimera Channel
pdb|3LNM|C Chain C, F233w Mutant Of The Kv2.1 Paddle-Kv1.2 Chimera Channel
Length = 333
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 30 HVNVKSIDKSKESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGN 89
++K K+ + + R Q L+ + + ER+ GCT QLA+AW
Sbjct: 230 RASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERL-------GCTLPQLAIAWCLRNEG 282
Query: 90 DVCPIPGTTKIENLNQNIKALSV--KLSPEEMAELESI 125
+ G + E L +NI A+ V KLS + E++SI
Sbjct: 283 VSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 320
>pdb|1EXB|A Chain A, Structure Of The Cytoplasmic Beta Subunit-T1 Assembly Of
Voltage-Dependent K Channels
Length = 332
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 30 HVNVKSIDKSKESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGN 89
++K K+ + + R Q L+ + + ER+ GCT QLA+AW
Sbjct: 229 RASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERL-------GCTLPQLAIAWCLRNEG 281
Query: 90 DVCPIPGTTKIENLNQNIKALSV--KLSPEEMAELESI 125
+ G + E L +NI A+ V KLS + E++SI
Sbjct: 282 VSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 319
>pdb|3EB4|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (I211r) In
Complex With Cortisone
Length = 327
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 30 HVNVKSIDKSKESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGN 89
++K K+ + + R Q L+ + + ER+ GCT QLA+AW
Sbjct: 230 RASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERL-------GCTLPQLAIAWCLRNEG 282
Query: 90 DVCPIPGTTKIENLNQNIKALSV--KLSPEEMAELESI 125
+ G + E L +NI A+ V KLS + E++SI
Sbjct: 283 VSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 320
>pdb|3EAU|A Chain A, Voltage-Dependent K+ Channel Beta Subunit In Complex With
Cortisone
Length = 327
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 30 HVNVKSIDKSKESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGN 89
++K K+ + + R Q L+ + + ER+ GCT QLA+AW
Sbjct: 230 RASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERL-------GCTLPQLAIAWCLRNEG 282
Query: 90 DVCPIPGTTKIENLNQNIKALSV--KLSPEEMAELESI 125
+ G + E L +NI A+ V KLS + E++SI
Sbjct: 283 VSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 320
>pdb|1QRQ|A Chain A, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|B Chain B, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|C Chain C, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|D Chain D, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
Length = 325
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 30 HVNVKSIDKSKESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGN 89
++K K+ + + R Q L+ + + ER+ GCT QLA+AW
Sbjct: 229 RASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERL-------GCTLPQLAIAWCLRNEG 281
Query: 90 DVCPIPGTTKIENLNQNIKALSV--KLSPEEMAELESI 125
+ G + E L +NI A+ V KLS + E++SI
Sbjct: 282 VSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 319
>pdb|3EB3|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (W121a) In
Complex With Cortisone
Length = 327
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 30 HVNVKSIDKSKESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGN 89
++K K+ + + R Q L+ + + ER+ GCT QLA+AW
Sbjct: 230 RASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERL-------GCTLPQLAIAWCLRNEG 282
Query: 90 DVCPIPGTTKIENLNQNIKALSV--KLSPEEMAELESI 125
+ G + E L +NI A+ V KLS + E++SI
Sbjct: 283 VSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 320
>pdb|2ALR|A Chain A, Aldehyde Reductase
Length = 324
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 65 VNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELES 124
V +A K G +P+Q+ L W Q +C IP + + QNIK SPEEM +L +
Sbjct: 233 VLALAEKYGRSPAQILLRW-QVQRKVIC-IPKSITPSRILQNIKVFDFTFSPEEMKQLNA 290
Query: 125 I 125
+
Sbjct: 291 L 291
>pdb|4GAC|A Chain A, High Resolution Structure Of Mouse Aldehyde Reductase
(akr1a4) In Its Apo-form
pdb|4GAC|B Chain B, High Resolution Structure Of Mouse Aldehyde Reductase
(akr1a4) In Its Apo-form
Length = 324
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 65 VNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELES 124
V +A K G +P+Q+ L W Q +C IP + + QNI+ SPEEM +L++
Sbjct: 233 VLALAEKHGRSPAQILLRW-QVQRKVIC-IPKSINPSRILQNIQVFDFTFSPEEMKQLDA 290
Query: 125 I 125
+
Sbjct: 291 L 291
>pdb|1ZSX|A Chain A, Crystal Structure Of Human Potassium Channel Kv
Beta-Subunit (Kcnab2)
Length = 347
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 30 HVNVKSIDKSKESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGN 89
++K K+ + + R Q L+ + + ER+ GCT QLA+AW
Sbjct: 251 RASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERL-------GCTLPQLAIAWCLRNEG 303
Query: 90 DVCPIPGTTKIENLNQNIKALSV--KLSPEEMAELESI 125
+ G + + L +NI A+ V KLS + E++SI
Sbjct: 304 VSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSI 341
>pdb|1HQT|A Chain A, The Crystal Structure Of An Aldehyde Reductase Y50f
Mutant- Nadp Complex And Its Implications For Substrate
Binding
Length = 326
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 65 VNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELES 124
V +A K +P+Q+ L W Q +C IP + + QNI+ SPEEM +L++
Sbjct: 235 VQALAEKYNRSPAQILLRW-QVQRKVIC-IPKSVTPSRIPQNIQVFDFTFSPEEMKQLDA 292
Query: 125 I 125
+
Sbjct: 293 L 293
>pdb|1CWN|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Holoenzyme
Length = 324
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 65 VNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELES 124
V +A K +P+Q+ L W Q +C IP + + QNI+ SPEEM +L++
Sbjct: 233 VQALAEKYNRSPAQILLRW-QVQRKVIC-IPKSVTPSRIPQNIQVFDFTFSPEEMKQLDA 290
Query: 125 I 125
+
Sbjct: 291 L 291
>pdb|1AE4|A Chain A, Aldehyde Reductase Complexed With Cofactor And Inhibitor,
Alpha Carbon Atoms Only
Length = 325
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 65 VNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELES 124
V +A K +P+Q+ L W Q +C IP + + QNI+ SPEEM +L++
Sbjct: 234 VQALAEKYNRSPAQILLRW-QVQRKVIC-IPKSVTPSRIPQNIQVFDFTFSPEEMKQLDA 291
Query: 125 I 125
+
Sbjct: 292 L 292
>pdb|3O3R|A Chain A, Crystal Structure Of Akr1b14 In Complex With Nadp
pdb|3O3R|B Chain B, Crystal Structure Of Akr1b14 In Complex With Nadp
Length = 316
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 64 RVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELE 123
++ EIA K T +Q+ + + H +V IP + + ++ +NI+ +LS E+MA +
Sbjct: 233 KIKEIAAKHKKTIAQVLIRF--HVQRNVAVIPKSVTLSHIKENIQVFDFQLSEEDMAAIL 290
Query: 124 SIASADAVRGHRYGGVTPTYEDSETP 149
S+ R R G+ T ++ + P
Sbjct: 291 SLN-----RNWRACGLFVTSDEEDFP 311
>pdb|3QKZ|A Chain A, Crystal Structure Of Mutant His269arg Akr1b14
pdb|3QKZ|B Chain B, Crystal Structure Of Mutant His269arg Akr1b14
Length = 316
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 64 RVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELE 123
++ EIA K T +Q+ + + H +V IP + + + +NI+ +LS E+MA +
Sbjct: 233 KIKEIAAKHKKTIAQVLIRF--HVQRNVAVIPKSVTLSRIKENIQVFDFQLSEEDMAAIL 290
Query: 124 SIASADAVRGHRYGGVTPTYEDSETP 149
S+ R R G+ T ++ + P
Sbjct: 291 SLN-----RNWRACGLFVTSDEEDFP 311
>pdb|3CV7|A Chain A, Crystal Structure Of Porcine Aldehyde Reductase Ternary
Complex
pdb|3H4G|A Chain A, Structure Of Aldehyde Reductase Holoenzyme In Complex With
Potent Aldose Reductase Inhibitor Fidarestat:
Implications For Inhibitor Binding And Selectivity
pdb|3FX4|A Chain A, Porcine Aldehyde Reductase In Ternary Complex With
Inhibitor
Length = 325
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 65 VNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELES 124
V +A K +P+Q+ L W Q +C IP + + QNI+ SPEEM +L++
Sbjct: 234 VQALAEKYNRSPAQILLRW-QVQRKVIC-IPKSVTPSRILQNIQVFDFTFSPEEMKQLDA 291
Query: 125 I 125
+
Sbjct: 292 L 292
>pdb|1M9H|A Chain A, Corynebacterium 2,5-dkgr A And Phe 22 Replaced With Tyr
(f22y), Lys 232 Replaced With Gly (k232g), Arg 238
Replaced With His (r238h)and Ala 272 Replaced With Gly
(a272g)in Presence Of Nadh Cofactor
Length = 278
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 63 ERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAEL 122
E V A G TP+Q L W H PG+ + E+L +N+ L+ E+A +
Sbjct: 201 EPVTAAAAAHGKTPAQAVLRW--HLQKGFVVFPGSVRREHLEENLDVFDFDLTDTEIAAI 258
Query: 123 ESIASADA---VRGH 134
+++ D V GH
Sbjct: 259 DAMDPGDGSGRVSGH 273
>pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11a(Apo)
pdb|1PZ0|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11a(Holo)
Length = 312
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 47 QPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQN 106
Q F+ E + N + ++ IA K + LAW + IPG + + L N
Sbjct: 230 QEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDN 289
Query: 107 IKALSVKLSPEEMAELESI 125
IK V LS E+++ ++ +
Sbjct: 290 IKTADVTLSQEDISFIDKL 308
>pdb|1ZUA|X Chain X, Crystal Structure Of Akr1b10 Complexed With Nadp+ And
Tolrestat
Length = 317
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 64 RVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELE 123
++ EIA K T +Q+ + + H +V IP + + +NI+ KLS EEMA +
Sbjct: 234 KIKEIAAKHKKTAAQVLIRF--HIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATIL 291
Query: 124 SI 125
S
Sbjct: 292 SF 293
>pdb|1MZR|A Chain A, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved
By Molecular Replacement
pdb|1MZR|B Chain B, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved
By Molecular Replacement
Length = 296
Score = 32.7 bits (73), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 56 EHNKKLFER--VNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVK 113
+ K +F++ + ++A K G TP+Q+ + W H + + IP + + +N +
Sbjct: 212 QGGKGVFDQKVIRDLADKYGKTPAQIVIRW--HLDSGLVVIPKSVTPSRIAENFDVWDFR 269
Query: 114 LSPEEMAELESIASADAVRGHRYG 137
L +E+ E IA D +G R G
Sbjct: 270 LDKDELGE---IAKLD--QGKRLG 288
>pdb|2BGQ|A Chain A, Apo Aldose Reductase From Barley
pdb|2BGS|A Chain A, Holo Aldose Reductase From Barley
pdb|2VDG|A Chain A, Barley Aldose Reductase 1 Complex With Butanol
Length = 344
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 65 VNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELES 124
V ++A K TP Q+ + W +G V IP ++K E + +NI+ ++ E+ L S
Sbjct: 254 VEKVANKLNKTPGQVLIKWALQRGTSV--IPKSSKDERIKENIQVFGWEIPEEDFKVLCS 311
Query: 125 I 125
I
Sbjct: 312 I 312
>pdb|1FRB|A Chain A, Fr-1 ProteinNADPHZOPOLRESTAT COMPLEX
Length = 315
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 64 RVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELE 123
++ EIA K T +Q+ + + H +V IP + + +NI+ +LS EEMA +
Sbjct: 232 KIKEIAAKHEKTSAQVLIRF--HIQRNVVVIPKSVTPSRIQENIQVFDFQLSDEEMATIL 289
Query: 124 SI 125
S
Sbjct: 290 SF 291
>pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From
Gluconobacter Oxydans
Length = 348
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 40 KESLFLHQPRFQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTK 99
K+ L + P+FQ N E + ++A K+G + A+ WV QG V + G K
Sbjct: 244 KDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQGP-VIALWGARK 302
Query: 100 IENLNQNIKALSVKLSPEEMAELESI 125
++ L+ EE ++ I
Sbjct: 303 PGQVSGVKDVFGWSLTDEEKKAVDDI 328
>pdb|3H7U|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme
Akr4c9
Length = 335
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 65 VNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELES 124
+N +A K G +P+Q+AL W G+ V +P +T + +N + A+
Sbjct: 247 LNMVAEKLGKSPAQVALRWGLQMGHSV--LPKSTNEGRIKENFNVFDWSIPDYMFAKFAE 304
Query: 125 IASADAVRG 133
I A V G
Sbjct: 305 IEQARLVTG 313
>pdb|1HW6|A Chain A, Crystal Structure Of Apo-2,5-Diketo-D-Gluconate Reductase
Length = 278
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 73 GCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELESIASADA 130
G TP+Q L W H P + + E L +N+ L+ E+A ++++ D
Sbjct: 211 GKTPAQAVLRW--HLQKGFVVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMDPGDG 266
>pdb|1A80|A Chain A, Native 2,5-Diketo-D-Gluconic Acid Reductase A From
Corynbacterium Sp. Complexed With Nadph
Length = 277
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 73 GCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELESIASADA 130
G TP+Q L W H P + + E L +N+ L+ E+A ++++ D
Sbjct: 210 GKTPAQAVLRW--HLQKGFVVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMDPGDG 265
>pdb|1Z9A|A Chain A, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|B Chain B, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|C Chain C, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|D Chain D, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
Length = 321
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 63 ERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAEL 122
+ + IA K TP+++ L W +G + IP + E L QN + L+ E+ E+
Sbjct: 242 DTIKAIAAKYNKTPAEVLLRWAAQRG--IAVIPKSNLPERLVQNRSFNTFDLTKEDFEEI 299
Query: 123 ESI 125
+
Sbjct: 300 AKL 302
>pdb|1JEZ|A Chain A, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto
Reductase From Candida Tenuis
pdb|1JEZ|B Chain B, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto
Reductase From Candida Tenuis
pdb|1K8C|A Chain A, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|B Chain B, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|C Chain C, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|D Chain D, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1MI3|A Chain A, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|B Chain B, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|C Chain C, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|D Chain D, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
Length = 322
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 63 ERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAEL 122
+ + IA K TP+++ L W +G + IP + E L QN + L+ E+ E+
Sbjct: 243 DTIKAIAAKYNKTPAEVLLRWAAQRG--IAVIPKSNLPERLVQNRSFNTFDLTKEDFEEI 300
Query: 123 ESI 125
+
Sbjct: 301 AKL 303
>pdb|1R38|A Chain A, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
pdb|1R38|B Chain B, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
pdb|1R38|C Chain C, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
pdb|1R38|D Chain D, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
Length = 322
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 63 ERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAEL 122
+ + IA K TP+++ L W +G + IP + E L QN + L+ E+ E+
Sbjct: 243 DTIKAIAAKYNKTPAEVLLRWAAQRG--IAVIPKSNLPERLVQNRSFNTFDLTKEDFEEI 300
Query: 123 ESI 125
+
Sbjct: 301 AKL 303
>pdb|1YE4|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|B Chain B, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|C Chain C, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|D Chain D, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE6|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|B Chain B, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|C Chain C, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|D Chain D, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
Length = 322
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 63 ERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAEL 122
+ + IA K TP+++ L W +G + IP + E L QN + L+ E+ E+
Sbjct: 243 DTIKAIAAKYNKTPAEVLLRWAAQRG--IAVIPRSNLPERLVQNRSFNTFDLTKEDFEEI 300
Query: 123 ESI 125
+
Sbjct: 301 AKL 303
>pdb|2BEI|A Chain A, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2BEI|B Chain B, X-Ray Structure Of Thialysine N-Acetyltransferase (Ssat2)
From Homo Sapiens
pdb|2Q4V|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
pdb|2Q4V|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Thialysine N- Acetyltransferase (Ssat2) From Homo
Sapiens
Length = 170
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 11 SKLLHPCGSFHFCYIALPMHVNVKSIDKSKESLFLHQPRFQPENLEHN--KKLFERVNEI 68
KLL PC + ++ + S K + +++L PE K+ ++V E+
Sbjct: 64 GKLLGPC------VVGYGIYYFIYSTWKGR-TIYLEDIYVXPEYRGQGIGSKIIKKVAEV 116
Query: 69 AVKKGCTPSQLALAWVHHQGNDVCPIPGTTKI 100
A+ KGC+ +LA+ + + D+ G +
Sbjct: 117 ALDKGCSQFRLAVLDWNQRAXDLYKALGAQDL 148
>pdb|1SM9|A Chain A, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|B Chain B, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|C Chain C, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|D Chain D, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
Length = 322
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 63 ERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAEL 122
+ + IA K TP+++ L W +G + IP + E L QN + L+ E+ E+
Sbjct: 243 DTIKAIAAKYNKTPAEVLLRWAAQRG--IAVIPRSDLPERLVQNRSFNTFDLTKEDFEEI 300
Query: 123 ESI 125
+
Sbjct: 301 AKL 303
>pdb|1DLA|A Chain A, Novel Nadph-Binding Domain Revealed By The Crystal
Structure Of Aldose Reductase
pdb|1DLA|B Chain B, Novel Nadph-Binding Domain Revealed By The Crystal
Structure Of Aldose Reductase
pdb|1DLA|C Chain C, Novel Nadph-Binding Domain Revealed By The Crystal
Structure Of Aldose Reductase
pdb|1DLA|D Chain D, Novel Nadph-Binding Domain Revealed By The Crystal
Structure Of Aldose Reductase
Length = 314
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 64 RVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELE 123
R+ IA K T +Q+ + + + ++ IP + E + +N + +LSPE+M L
Sbjct: 231 RIKAIAAKYNKTTAQVLIRFPMQR--NLIVIPKSVTPERIAENFQVFDFELSPEDMNTLL 288
Query: 124 S 124
S
Sbjct: 289 S 289
>pdb|1EKO|A Chain A, Pig Aldose Reductase Complexed With Idd384 Inhibitor
pdb|1AH3|A Chain A, Aldose Reductase Complexed With Tolrestat Inhibitor
pdb|1AH4|A Chain A, Pig Aldose Reductase, Holo Form
Length = 315
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 64 RVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELE 123
R+ IA K T +Q+ + + + ++ IP + E + +N + +LSPE+M L
Sbjct: 232 RIKAIAAKYNKTTAQVLIRFPMQR--NLIVIPKSVTPERIAENFQVFDFELSPEDMNTLL 289
Query: 124 S 124
S
Sbjct: 290 S 290
>pdb|1AH0|A Chain A, Pig Aldose Reductase Complexed With Sorbinil
Length = 316
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 64 RVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELE 123
R+ IA K T +Q+ + + + ++ IP + E + +N + +LSPE+M L
Sbjct: 233 RIKAIAAKYNKTTAQVLIRFPMQR--NLIVIPKSVTPERIAENFQVFDFELSPEDMNTLL 290
Query: 124 S 124
S
Sbjct: 291 S 291
>pdb|3H7R|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme
Akr4c8
Length = 331
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 65 VNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEM 119
V E+A K G T +Q+AL W G+ V +P ++ L +N+ + PE++
Sbjct: 243 VTEVAEKLGKTTAQVALRWGLQTGHSV--LPKSSSGARLKENLDVFDWSI-PEDL 294
>pdb|4AI6|A Chain A, Dynein Motor Domain - Adp Complex
pdb|4AI6|B Chain B, Dynein Motor Domain - Adp Complex
pdb|4AKG|A Chain A, Dynein Motor Domain - Atp Complex
pdb|4AKG|B Chain B, Dynein Motor Domain - Atp Complex
pdb|4AKH|A Chain A, Dynein Motor Domain - Amppnp Complex
pdb|4AKH|B Chain B, Dynein Motor Domain - Amppnp Complex
pdb|4AKI|A Chain A, Dynein Motor Domain - Luac Derivative
pdb|4AKI|B Chain B, Dynein Motor Domain - Luac Derivative
Length = 2695
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 19/79 (24%)
Query: 50 FQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENL-NQNIK 108
F+ +NL+H T ++ L W DVC I ++KI++L N++ +
Sbjct: 1050 FETDNLDHTTP-------------ATITRCGLLWF---STDVCSI--SSKIDHLLNKSYE 1091
Query: 109 ALSVKLSPEEMAELESIAS 127
AL KLS E+ +L+ + S
Sbjct: 1092 ALDNKLSMFELDKLKDLIS 1110
>pdb|3T6A|A Chain A, Structure Of The C-Terminal Domain Of Bcar3
pdb|3T6A|B Chain B, Structure Of The C-Terminal Domain Of Bcar3
pdb|3T6A|C Chain C, Structure Of The C-Terminal Domain Of Bcar3
pdb|3T6A|D Chain D, Structure Of The C-Terminal Domain Of Bcar3
Length = 333
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 23/99 (23%)
Query: 23 CYIALPMHVNVKSIDKSKESLFLHQPR----FQPENLEHNKKLFERVNEIAVKKGC-TPS 77
C I L + + ++ +S ++ R FQP+ E +NEI C T
Sbjct: 237 CEIMLNHLATARFMAEAADSYRMNAERILAGFQPD---------EEMNEI-----CKTEF 282
Query: 78 QLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSP 116
Q+ L W G+ + T + E NQ + ALS KL P
Sbjct: 283 QMRLLW----GSKGAQVNQTERYEKFNQILTALSRKLEP 317
>pdb|3QMZ|A Chain A, Crystal Structure Of The Cytoplasmic Dynein Heavy Chain
Motor Domain
pdb|3QMZ|B Chain B, Crystal Structure Of The Cytoplasmic Dynein Heavy Chain
Motor Domain
Length = 2486
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 19/79 (24%)
Query: 50 FQPENLEHNKKLFERVNEIAVKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENL-NQNIK 108
F+ +NL+H T ++ L W DVC I ++KI++L N++ +
Sbjct: 831 FETDNLDHTTP-------------ATITRCGLLWF---STDVCSI--SSKIDHLLNKSYE 872
Query: 109 ALSVKLSPEEMAELESIAS 127
AL KLS E+ +L+ + S
Sbjct: 873 ALDNKLSMFELDKLKDLIS 891
>pdb|1OG6|A Chain A, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
pdb|1OG6|B Chain B, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
pdb|1OG6|C Chain C, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
Length = 298
Score = 26.2 bits (56), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 78 QLALAWVHHQGNDVCPIPGTTKIENLNQNIKALSVKLSPEEMAELESIA 126
Q+ AWV + PI G+ KIE + ++A ++K++ ++ + A
Sbjct: 244 QVVNAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAA 292
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.131 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,773,748
Number of Sequences: 62578
Number of extensions: 168985
Number of successful extensions: 509
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 480
Number of HSP's gapped (non-prelim): 52
length of query: 157
length of database: 14,973,337
effective HSP length: 91
effective length of query: 66
effective length of database: 9,278,739
effective search space: 612396774
effective search space used: 612396774
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.7 bits)