Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>041503
MSSSTNESRNSLQVCNECGGQIELFTSHTTKNPNRKFWKCRVCKNFQWAEDRKFSNEKID
LLVEEVRKLTLEIERLSDKFRLLHKELEHTQLRSKYGLS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041503
        (99 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2159083 - symbol:AT5G13920 species:3702 "Arabi...    86  0.00011   2
TAIR|locus:2143231 - symbol:AT5G15690 species:3702 "Arabi...    88  0.00051   1


>TAIR|locus:2159083 [details] [associations]
            symbol:AT5G13920 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 InterPro:IPR010666 Pfam:PF00098 Pfam:PF06839
            PROSITE:PS50158 SMART:SM00343 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            EMBL:AB005230 GO:GO:0004519 Gene3D:4.10.60.10 KO:K10569
            IPI:IPI00528169 RefSeq:NP_196896.1 UniGene:At.54840
            EnsemblPlants:AT5G13920.1 GeneID:831239 KEGG:ath:AT5G13920
            TAIR:At5g13920 eggNOG:NOG276344 HOGENOM:HOG000152446 OMA:ANTRENP
            PhylomeDB:Q9FFY2 ProtClustDB:CLSN2682434 Genevestigator:Q9FFY2
            Uniprot:Q9FFY2
        Length = 415

 Score = 86 (35.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 22/63 (34%), Positives = 37/63 (58%)

Query:     1 MSSSTNESRNSLQVCNECGGQI-ELFTSHTTKNPNRKFWKCRVCKN---FQWAEDRKFSN 56
             + S T++   ++Q C  CGG   E+  ++T +NP RKF+KC   +N   F+W +  K ++
Sbjct:    26 LKSYTDDPPPAIQ-C-PCGGGFCEIKVANTRENPGRKFYKCPTAQNCCFFKWCD--KVTD 81

Query:    57 EKI 59
             E I
Sbjct:    82 EDI 84

 Score = 35 (17.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 9/39 (23%), Positives = 22/39 (56%)

Query:    53 KFSNEKIDLLVEEVRKLTLEIERLSD--KFRLLHKELEH 89
             ++++EK+ L     + + +  E ++   + RLLH++  H
Sbjct:   310 QYNSEKLQLESISGKHVQMLSEFMASYRRLRLLHEKTSH 348


>TAIR|locus:2143231 [details] [associations]
            symbol:AT5G15690 species:3702 "Arabidopsis thaliana"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046686 "response
            to cadmium ion" evidence=IEP] InterPro:IPR010666 Pfam:PF06839
            EMBL:CP002688 GO:GO:0046686 GO:GO:0008270 EMBL:AL391144
            EMBL:DQ446954 IPI:IPI00535183 PIR:T51398 RefSeq:NP_197073.1
            UniGene:At.51902 UniGene:At.54858 UniGene:At.70716 STRING:Q9LFV7
            EnsemblPlants:AT5G15690.1 GeneID:831423 KEGG:ath:AT5G15690
            TAIR:At5g15690 InParanoid:Q9LFV7 PhylomeDB:Q9LFV7
            Genevestigator:Q9LFV7 Uniprot:Q9LFV7
        Length = 169

 Score = 88 (36.0 bits), Expect = 0.00051, P = 0.00051
 Identities = 25/86 (29%), Positives = 43/86 (50%)

Query:    18 CGGQIELFTSHTTKNPNRKFWKCRVC---KN----FQWAEDR-----KFSNEKIDLLVEE 65
             CG +I  FTS T +NP R+F++C +    +N    F+W ++      K  NEK   + E 
Sbjct:    28 CGEEIITFTSKTKENPYRRFYRCAIAMKRENEEHLFKWVDEALLDEIKMVNEKCKRVAEN 87

Query:    66 VRKLTLEI----ERLSDKFRLLHKEL 87
             +  L + +    E L+   + + +EL
Sbjct:    88 ISDLRMNVMVNMELLNKNAKQMEEEL 113


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.130   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        99   0.00091  102 3  11 22  0.40    30
                                                     29  0.46    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  570 (61 KB)
  Total size of DFA:  130 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.68u 0.10s 13.78t   Elapsed:  00:00:00
  Total cpu time:  13.68u 0.10s 13.78t   Elapsed:  00:00:01
  Start:  Fri May 10 16:41:08 2013   End:  Fri May 10 16:41:09 2013

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