Query         041507
Match_columns 481
No_of_seqs    175 out of 1914
Neff          11.1
Searched_HMMs 46136
Date          Fri Mar 29 07:52:28 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041507.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041507hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0   1E-85 2.2E-90  621.7  44.1  461    5-479    19-489 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 8.9E-79 1.9E-83  595.8  43.1  466    2-477    18-498 (499)
  3 PLN00110 flavonoid 3',5'-hydro 100.0 3.2E-78 6.9E-83  588.6  45.3  463    7-478    26-497 (504)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 3.5E-78 7.6E-83  592.0  45.8  463    9-478    31-509 (517)
  5 PLN02971 tryptophan N-hydroxyl 100.0 4.3E-78 9.3E-83  593.1  44.7  464    8-478    53-534 (543)
  6 PLN02183 ferulate 5-hydroxylas 100.0 6.1E-78 1.3E-82  590.2  43.1  465    5-478    29-512 (516)
  7 PLN03112 cytochrome P450 famil 100.0 6.2E-77 1.3E-81  584.4  46.6  471    3-478    23-508 (514)
  8 PLN02655 ent-kaurene oxidase   100.0 2.4E-76 5.2E-81  572.1  44.0  453   14-479     1-465 (466)
  9 PLN02394 trans-cinnamate 4-mon 100.0 4.2E-76   9E-81  577.5  43.6  469    4-478    22-502 (503)
 10 PTZ00404 cytochrome P450; Prov 100.0 3.2E-76 6.9E-81  575.2  41.5  452    5-477    22-482 (482)
 11 KOG0158 Cytochrome P450 CYP3/C 100.0 1.1E-76 2.4E-81  551.1  35.9  444   13-478    32-499 (499)
 12 PLN02966 cytochrome P450 83A1  100.0 1.9E-75 4.2E-80  571.1  45.7  463    5-479    22-501 (502)
 13 KOG0159 Cytochrome P450 CYP11/ 100.0   2E-76 4.4E-81  535.9  35.6  459    7-478    45-518 (519)
 14 PLN00168 Cytochrome P450; Prov 100.0 4.3E-75 9.3E-80  570.5  45.5  467    7-478    30-517 (519)
 15 PLN02500 cytochrome P450 90B1  100.0 8.8E-74 1.9E-78  558.2  38.1  442    6-476    32-488 (490)
 16 PLN03018 homomethionine N-hydr 100.0 1.3E-72 2.8E-77  549.8  45.4  463   10-478    38-524 (534)
 17 PLN02290 cytokinin trans-hydro 100.0 8.8E-74 1.9E-78  562.4  36.7  444   11-479    41-516 (516)
 18 KOG0157 Cytochrome P450 CYP4/C 100.0   9E-74   2E-78  552.4  33.8  455   10-479    33-497 (497)
 19 PF00067 p450:  Cytochrome P450 100.0 2.6E-74 5.6E-79  564.1  27.8  447   14-474     1-463 (463)
 20 PLN03141 3-epi-6-deoxocathaste 100.0 9.6E-72 2.1E-76  538.4  38.8  437    7-478     2-450 (452)
 21 PLN02774 brassinosteroid-6-oxi 100.0 1.8E-71   4E-76  537.6  37.0  430    6-476    25-462 (463)
 22 PLN02738 carotene beta-ring hy 100.0 7.1E-71 1.5E-75  543.1  41.7  446   24-479   143-596 (633)
 23 PLN02169 fatty acid (omega-1)- 100.0 3.5E-71 7.6E-76  538.0  37.2  444   13-477    32-499 (500)
 24 PLN03195 fatty acid omega-hydr 100.0 1.9E-71 4.1E-76  545.3  34.9  451   13-478    31-516 (516)
 25 PLN02936 epsilon-ring hydroxyl 100.0   1E-69 2.2E-74  528.0  39.2  457   11-479    11-483 (489)
 26 PLN02196 abscisic acid 8'-hydr 100.0 1.3E-69 2.7E-74  524.3  36.6  425    9-476    32-461 (463)
 27 PLN02987 Cytochrome P450, fami 100.0 1.9E-69 4.2E-74  520.8  37.6  440    3-479    21-470 (472)
 28 PLN02302 ent-kaurenoic acid ox 100.0 1.7E-68 3.7E-73  523.6  38.5  436    7-479    37-489 (490)
 29 KOG0684 Cytochrome P450 [Secon 100.0 1.5E-68 3.3E-73  472.4  31.3  442   12-478    31-485 (486)
 30 PLN02426 cytochrome P450, fami 100.0 3.6E-67 7.8E-72  509.0  36.3  441   19-479    48-501 (502)
 31 PLN02648 allene oxide synthase 100.0 2.2E-60 4.7E-65  454.2  31.4  406    8-451    13-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.9E-54   4E-59  409.0  32.4  378   33-477    24-410 (411)
 33 KOG0114 Predicted RNA-binding   66.3      25 0.00055   25.7   5.5   61   11-73     11-77  (124)
 34 PF08492 SRP72:  SRP72 RNA-bind  63.2     5.4 0.00012   25.8   1.6    8  393-400    44-51  (59)
 35 PF12508 DUF3714:  Protein of u  58.0     2.5 5.5E-05   35.4  -0.7   45  329-375    51-95  (200)
 36 PF05952 ComX:  Bacillus compet  49.2      17 0.00037   23.3   2.1   23  294-316     5-27  (57)
 37 PRK06789 flagellar motor switc  40.8      33 0.00071   23.5   2.6   39  337-375    22-62  (74)
 38 KOG3506 40S ribosomal protein   37.5      15 0.00033   23.0   0.6   11  414-424    12-22  (56)
 39 PF13625 Helicase_C_3:  Helicas  37.2      86  0.0019   24.3   5.0   41   31-73     74-114 (129)
 40 PF12554 MOZART1:  Mitotic-spin  37.1   1E+02  0.0022   19.1   4.1   42  271-312     6-47  (48)
 41 PF09201 SRX:  SRX;  InterPro:   34.8      39 0.00084   26.2   2.5   23  421-443    18-40  (148)
 42 PRK02302 hypothetical protein;  32.4   1E+02  0.0022   22.0   4.1   34   39-72     21-54  (89)
 43 TIGR03779 Bac_Flav_CT_M Bacter  32.0     9.1  0.0002   36.1  -1.4   45  329-375   254-298 (410)
 44 PF11138 DUF2911:  Protein of u  31.1      56  0.0012   25.9   2.9   41  354-395    51-98  (145)
 45 PF13893 RRM_5:  RNA recognitio  30.9   1E+02  0.0022   19.3   3.8   36   37-72      1-40  (56)
 46 PRK02886 hypothetical protein;  29.1 1.3E+02  0.0028   21.4   4.1   34   39-72     19-52  (87)
 47 PF14129 DUF4296:  Domain of un  28.8 2.1E+02  0.0047   20.2   7.3   50  267-316    29-78  (87)
 48 KOG3262 H/ACA small nucleolar   25.8      38 0.00082   27.6   1.2   36  364-401   106-142 (215)
 49 PF04798 Baculo_19:  Baculoviru  25.3      19 0.00041   28.2  -0.5   21  409-430    56-76  (146)
 50 PF09902 DUF2129:  Uncharacteri  24.2 1.8E+02   0.004   19.8   4.0   33   40-72     16-48  (71)
 51 COG4471 Uncharacterized protei  24.2 2.7E+02  0.0059   19.8   4.9   36   38-73     19-54  (90)
 52 PF14483 Cut8_M:  Cut8 dimerisa  22.7 1.4E+02   0.003   17.4   2.8   16  295-310    19-35  (38)
 53 PF15080 DUF4547:  Domain of un  22.6 2.6E+02  0.0057   22.4   5.1   52  264-315   110-171 (196)
 54 PF07849 DUF1641:  Protein of u  22.6      98  0.0021   18.4   2.3   20  291-310    12-31  (42)
 55 COG1707 ACT domain-containing   22.0      98  0.0021   24.9   2.8   40   30-69    153-197 (218)
 56 PHA03162 hypothetical protein;  21.9      61  0.0013   24.8   1.6   24  417-440     2-25  (135)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1e-85  Score=621.70  Aligned_cols=461  Identities=43%  Similarity=0.750  Sum_probs=408.0

Q ss_pred             cccCCCCCCCCCCCCCccccccCCCCCc-HHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCC
Q 041507            5 KSTRRIQPLPPGPRGLPFVGNLPFIEPD-LHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDP   83 (481)
Q Consensus         5 ~~~~~~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~   83 (481)
                      ++.+++.++||||+++|++||++.+... +|..+.+|.++|||||++++|..++|||+|+++++|+++++...|++|+..
T Consensus        19 ~~~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~   98 (489)
T KOG0156|consen   19 KKYRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDP   98 (489)
T ss_pred             HhccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCc
Confidence            3445558999999999999999999776 999999999999999999999999999999999999999999999999872


Q ss_pred             CccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc-cCCccchHHHHHHHHHHH
Q 041507           84 PAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK-IGSPVNIGELMFLTTLNA  162 (481)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~-~~~~vd~~~~~~~~~~~~  162 (481)
                      .........++.+++++.+|+.||.+||+....+++...++.....-+++++.+++.+.+. .+.+||+...+..+++++
T Consensus        99 ~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen   99 TATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNV  178 (489)
T ss_pred             hhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHH
Confidence            2233445557788999999999999999999899999999998888899999999999862 227999999999999999


Q ss_pred             HHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhc-cccccC-ccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041507          163 TTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFP-VLARFD-VQGVESKAKKHMLLFDKLFESSIGSRMKD  240 (481)
Q Consensus       163 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  240 (481)
                      |++++||.++...+.+ ...++.+.+.+.....+...+.+++| ++.+++ ..+..+........+.+++++.|+++++.
T Consensus       179 I~~~~fG~rf~~~~~~-~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~  257 (489)
T KOG0156|consen  179 ICRMLFGRRFEEEDEE-EFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREK  257 (489)
T ss_pred             HHHHHhCCccccCCch-HHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999876322 55669999999999999999999999 566654 23566777777777999999999999886


Q ss_pred             hhhcCccccCCccchhHHHHhhcc------CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q 041507          241 ELASGEEKKDGKVSKNFLQFLLKQ------SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQ  314 (481)
Q Consensus       241 ~~~~~~~~~~~~~~~d~l~~ll~~------~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~  314 (481)
                      . ..       ++..|++|.+++.      +.+++++|.+.+.++++||+|||++++.|++.+|+.||++|+|+++||++
T Consensus       258 ~-~~-------~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~  329 (489)
T KOG0156|consen  258 I-GD-------EEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDE  329 (489)
T ss_pred             h-cc-------CCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            5 11       1128999999982      12899999999999999999999999999999999999999999999999


Q ss_pred             HhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 041507          315 VVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQP  394 (481)
Q Consensus       315 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p  394 (481)
                      ++|.++.++..|+.+||||+|||+|++|+||++|..++|.+.+|+.++||.|||||.|+++.+++||||++|+||++|+|
T Consensus       330 vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~P  409 (489)
T KOG0156|consen  330 VVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKP  409 (489)
T ss_pred             HhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccCh
Confidence            99987779999999999999999999999999999899999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEee
Q 041507          395 DRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIP  474 (481)
Q Consensus       395 ~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  474 (481)
                      |||++.+   +.+.....++|||.|+|+|||..+|++|+.++++.||++|||+++++ ++|+.+. +++...+.++.+..
T Consensus       410 ERFl~~~---d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~  484 (489)
T KOG0156|consen  410 ERFLDSN---DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVP  484 (489)
T ss_pred             hhhcCCc---cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeee
Confidence            9999864   22345678999999999999999999999999999999999999887 7788777 47777788888888


Q ss_pred             eccCC
Q 041507          475 TARLS  479 (481)
Q Consensus       475 ~~r~~  479 (481)
                      .+|.+
T Consensus       485 ~~r~~  489 (489)
T KOG0156|consen  485 VPRLS  489 (489)
T ss_pred             ecCCC
Confidence            88753


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=8.9e-79  Score=595.78  Aligned_cols=466  Identities=32%  Similarity=0.619  Sum_probs=380.2

Q ss_pred             ccccccCCCCCCCCCCCCCccccccCCCCC-cHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCC
Q 041507            2 VVKKSTRRIQPLPPGPRGLPFVGNLPFIEP-DLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNR   80 (481)
Q Consensus         2 ~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~   80 (481)
                      ++++..+++.+.||||+++|++||+..+.. +++.++.+++++||++|++++|+.++|+++||+++++++.++...|..+
T Consensus        18 ~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r   97 (499)
T PLN03234         18 FLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTAR   97 (499)
T ss_pred             HHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCC
Confidence            456677888899999999999999988854 6889999999999999999999999999999999999999887778777


Q ss_pred             CCCCccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc--cCCccchHHHHHHH
Q 041507           81 GDPPAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK--IGSPVNIGELMFLT  158 (481)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~  158 (481)
                      +. ..........+..+.+...++.|+.+|+++..++|+++++..+.+.+.++++++++.+...  .++.+|+.+.+..+
T Consensus        98 ~~-~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~  176 (499)
T PLN03234         98 PL-LKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSF  176 (499)
T ss_pred             CC-chhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHH
Confidence            65 3222221222223345566899999999865589999999999999999999999999653  46789999999999


Q ss_pred             HHHHHHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccC-ccchHHHHHHHHHHHHHHHHHHHHHH
Q 041507          159 TLNATTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFD-VQGVESKAKKHMLLFDKLFESSIGSR  237 (481)
Q Consensus       159 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  237 (481)
                      ++|+++.++||.+++....  ....+.+.+...........+...+|++.... ..+..++..++.+.+.+++.+.|+++
T Consensus       177 t~dvi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~  254 (499)
T PLN03234        177 TNCVVCRQAFGKRYNEYGT--EMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDET  254 (499)
T ss_pred             HHHHHHHHHhCCcccccch--hHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998864432  23455555555444333333445556544321 12345677788888999999999887


Q ss_pred             HHhhhhcCccccCCccchhHHHHhhc---c----CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHH
Q 041507          238 MKDELASGEEKKDGKVSKNFLQFLLK---Q----SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACK  310 (481)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~d~l~~ll~---~----~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~  310 (481)
                      ++....       .....|+++.+++   +    ..+++++|.+++.++++||+|||+++++|++++|++||++|+|+++
T Consensus       255 ~~~~~~-------~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~  327 (499)
T PLN03234        255 LDPNRP-------KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQD  327 (499)
T ss_pred             Hhhccc-------CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            654210       1234678887775   1    2489999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCC-CCC
Q 041507          311 ELEQVVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAW-KNP  389 (481)
Q Consensus       311 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p  389 (481)
                      |++++++++..++++++.+|||++|||+|++|++|++++..+|.+.+|++++||.|||||.|.++++++||||++| +||
T Consensus       328 Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P  407 (499)
T PLN03234        328 EVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNP  407 (499)
T ss_pred             HHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCCh
Confidence            9999998767789999999999999999999999999986679999999999999999999999999999999999 899


Q ss_pred             CCCCCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCC---CccCccccccccccc
Q 041507          390 LEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEG---MKLDLSEKFGIVLKK  466 (481)
Q Consensus       390 ~~F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~---~~~~~~~~~~~~~~~  466 (481)
                      ++||||||+++++....+..+..++|||+|+|+|||+++|++|+++++|.|+++|+|+++++   .++......++..++
T Consensus       408 ~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  487 (499)
T PLN03234        408 NEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHK  487 (499)
T ss_pred             hhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccccccc
Confidence            99999999975433222344678999999999999999999999999999999999999876   234444467888888


Q ss_pred             CCCeeEeeecc
Q 041507          467 SEPLMAIPTAR  477 (481)
Q Consensus       467 ~~~~~~~~~~r  477 (481)
                      ++.+.+.+++|
T Consensus       488 ~~~~~~~~~~~  498 (499)
T PLN03234        488 KEHLVLAPTKH  498 (499)
T ss_pred             CCCeEEEeecC
Confidence            88888888876


No 3  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.2e-78  Score=588.61  Aligned_cols=463  Identities=36%  Similarity=0.678  Sum_probs=380.6

Q ss_pred             cCCCCCCCCCCCCCccccccCCCCCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCcc
Q 041507            7 TRRIQPLPPGPRGLPFVGNLPFIEPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAA   86 (481)
Q Consensus         7 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~   86 (481)
                      .+++.+.||||+++|++||++.+..+++.++.+++++||+||++++|++++|+|+||+++++++.+....|..++. ...
T Consensus        26 ~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~-~~~  104 (504)
T PLN00110         26 PKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPP-NAG  104 (504)
T ss_pred             hcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCC-ccc
Confidence            3556678999999999999988877789999999999999999999999999999999999999988777877764 322


Q ss_pred             ceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc--cCCccchHHHHHHHHHHHHH
Q 041507           87 AFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK--IGSPVNIGELMFLTTLNATT  164 (481)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~~~i~  164 (481)
                      ......++.+++++.+|+.|+++|+.+..+.|+.+.++.+.+.+.+++..+++.+...  .++.+|+.+++..+++|+|+
T Consensus       105 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~  184 (504)
T PLN00110        105 ATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIG  184 (504)
T ss_pred             hhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHH
Confidence            2222233445778888999999999997568999999999999999999999988653  56789999999999999999


Q ss_pred             HHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 041507          165 RMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELAS  244 (481)
Q Consensus       165 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (481)
                      .++||.++...... ....+.+.+...+.......+..++|++.+++.....++..+..+.+.+++.+.++++++...  
T Consensus       185 ~~~fg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--  261 (504)
T PLN00110        185 QVILSRRVFETKGS-ESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAH--  261 (504)
T ss_pred             HHHhCCcccccCch-hHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence            99999987322211 334566666666555444444566776655433334456666777788888888887765421  


Q ss_pred             CccccCCccchhHHHHhhc------cCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcC
Q 041507          245 GEEKKDGKVSKNFLQFLLK------QSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVGN  318 (481)
Q Consensus       245 ~~~~~~~~~~~d~l~~ll~------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~  318 (481)
                           ......|+++.+++      +..++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++++.
T Consensus       262 -----~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~  336 (504)
T PLN00110        262 -----ERKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR  336 (504)
T ss_pred             -----ccccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence                 01224689999986      1358999999999999999999999999999999999999999999999999887


Q ss_pred             CccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccc
Q 041507          319 DNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQPDRFL  398 (481)
Q Consensus       319 ~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~  398 (481)
                      ++.++++++++|||++|||+||+|++|++++..+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||+
T Consensus       337 ~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl  416 (504)
T PLN00110        337 NRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFL  416 (504)
T ss_pred             CCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCccccc
Confidence            67789999999999999999999999999986789999999999999999999999999999999999999999999999


Q ss_pred             cCCCCC-CCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEeeecc
Q 041507          399 KDGELG-DFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIPTAR  477 (481)
Q Consensus       399 ~~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  477 (481)
                      +++... +.+.....++|||+|+|.|+|++||++|+++++|.|+++|+|++.++.+.+.....++++.++.++.+++++|
T Consensus       417 ~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  496 (504)
T PLN00110        417 SEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPR  496 (504)
T ss_pred             CCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccC
Confidence            643211 1111235799999999999999999999999999999999999877654444445678888888999999998


Q ss_pred             C
Q 041507          478 L  478 (481)
Q Consensus       478 ~  478 (481)
                      .
T Consensus       497 ~  497 (504)
T PLN00110        497 L  497 (504)
T ss_pred             C
Confidence            4


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.5e-78  Score=592.00  Aligned_cols=463  Identities=41%  Similarity=0.754  Sum_probs=379.7

Q ss_pred             CCCCCCCCCCCCccccccCCCCCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCccce
Q 041507            9 RIQPLPPGPRGLPFVGNLPFIEPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAAAF   88 (481)
Q Consensus         9 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~~~   88 (481)
                      ++.+.||||.++|++||++.+..+++.++.+|+++||+||++++|++++++++||+++++++.++...|.+++. .....
T Consensus        31 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~-~~~~~  109 (517)
T PLN02687         31 HKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPP-NSGAE  109 (517)
T ss_pred             CCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCC-ccchh
Confidence            44468999999999999988877899999999999999999999999999999999999999988777877654 22222


Q ss_pred             ecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc-cCCccchHHHHHHHHHHHHHHHH
Q 041507           89 QATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK-IGSPVNIGELMFLTTLNATTRML  167 (481)
Q Consensus        89 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~-~~~~vd~~~~~~~~~~~~i~~~~  167 (481)
                      .....+.+++++.+|+.|+++|+++..++|+.++++.+.+.+.+++.++++.+... .++++|+.++++.+++|+++.++
T Consensus       110 ~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~  189 (517)
T PLN02687        110 HMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAM  189 (517)
T ss_pred             hhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence            22222345677778999999999996578999999999999999999999999753 45789999999999999999999


Q ss_pred             hccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcc
Q 041507          168 WGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELASGEE  247 (481)
Q Consensus       168 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  247 (481)
                      ||.++...+.+.....+.+.+...+...........+|++.++......++..+..+.+.+++.+.++++++....+   
T Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~---  266 (517)
T PLN02687        190 VGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG---  266 (517)
T ss_pred             hCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---
Confidence            99998654322234556666666665544333345667655443333345666677788888888898887653111   


Q ss_pred             ccCCccchhHHHHhhcc----------CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhc
Q 041507          248 KKDGKVSKNFLQFLLKQ----------SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVG  317 (481)
Q Consensus       248 ~~~~~~~~d~l~~ll~~----------~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~  317 (481)
                         +....|+++.+++.          ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++
T Consensus       267 ---~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  343 (517)
T PLN02687        267 ---SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVG  343 (517)
T ss_pred             ---CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC
Confidence               12356899999861          24899999999999999999999999999999999999999999999999987


Q ss_pred             CCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCccc
Q 041507          318 NDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQPDRF  397 (481)
Q Consensus       318 ~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~  397 (481)
                      .++.++.+++.+||||+|||+||+|++|+++...+|.+.+|++++|+.||+|+.|.++.+++||||++|+||++|+||||
T Consensus       344 ~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRf  423 (517)
T PLN02687        344 RDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRF  423 (517)
T ss_pred             CCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhc
Confidence            66778999999999999999999999999998678999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCC--CCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCC---ccCcccccccccccCCCeeE
Q 041507          398 LKDGELG--DFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGM---KLDLSEKFGIVLKKSEPLMA  472 (481)
Q Consensus       398 ~~~~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  472 (481)
                      ++.....  +....+..++|||+|+|.|+|++||++|+++++|.||++|+|++.++.   +++.....+++..+..++++
T Consensus       424 l~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (517)
T PLN02687        424 LPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMV  503 (517)
T ss_pred             CCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEE
Confidence            9643211  112234579999999999999999999999999999999999987663   23333345666667778999


Q ss_pred             eeeccC
Q 041507          473 IPTARL  478 (481)
Q Consensus       473 ~~~~r~  478 (481)
                      ++++|.
T Consensus       504 ~~~~R~  509 (517)
T PLN02687        504 HPRPRL  509 (517)
T ss_pred             eeccCC
Confidence            999984


No 5  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.3e-78  Score=593.06  Aligned_cols=464  Identities=28%  Similarity=0.511  Sum_probs=368.8

Q ss_pred             CCCCCCCCCCCCCccccccCCCCC--cHHHHHHHHHhhhC-CeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCC
Q 041507            8 RRIQPLPPGPRGLPFVGNLPFIEP--DLHSYFAKLSQIYG-PIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPP   84 (481)
Q Consensus         8 ~~~~~~ppgp~~~p~~G~~~~~~~--~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~   84 (481)
                      +++.++||||+++|++||++.+..  ..+.++.+|.++|| +||++++|++++|+|+||+++++++.++...|.+++. .
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~-~  131 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPL-T  131 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCc-c
Confidence            345679999999999999987733  24678999999999 8999999999999999999999999998888888875 3


Q ss_pred             ccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc--cCCccchHHHHHHHHHHH
Q 041507           85 AAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK--IGSPVNIGELMFLTTLNA  162 (481)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~~~  162 (481)
                      ........+..+++++.+|+.|+++|+++.+.++++..++.+.+.+.++++.+++.+.+.  .++++|+.+.++++++++
T Consensus       132 ~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~v  211 (543)
T PLN02971        132 YAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNA  211 (543)
T ss_pred             cchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHH
Confidence            322222222234678888999999999997677777667778888888888888877643  456799999999999999


Q ss_pred             HHHHHhccccCCCC---ccchHHHHHHHHHHHHHHhc---CCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHH
Q 041507          163 TTRMLWGTSLRGKD---RDIGDVQIRHVVREIIDLIG---APNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGS  236 (481)
Q Consensus       163 i~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  236 (481)
                      |++++||.++....   .+.....+...+...+....   ...+.+++|++.+++..+..+...+..+.+.+++.+.|++
T Consensus       212 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  291 (543)
T PLN02971        212 IKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDE  291 (543)
T ss_pred             HHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999874321   00011222233333332221   1234456776655432333455666677788888888888


Q ss_pred             HHHhhhhcCccccCCccchhHHHHhhcc-----C-CCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHH
Q 041507          237 RMKDELASGEEKKDGKVSKNFLQFLLKQ-----S-SLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACK  310 (481)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~-----~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~  310 (481)
                      +++....+     +.....|+++.+++.     . .+++++|.+++.++++||+|||+++++|++++|+.||++|+|+++
T Consensus       292 ~~~~~~~~-----~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~  366 (543)
T PLN02971        292 RIKMWREG-----KRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAME  366 (543)
T ss_pred             HHHHHhcc-----CCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            76543111     011246899999971     1 389999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCC
Q 041507          311 ELEQVVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPL  390 (481)
Q Consensus       311 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~  390 (481)
                      ||+++++.++.++++++.+|||++|||+|+||++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+||+
T Consensus       367 EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~  446 (543)
T PLN02971        367 EIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPL  446 (543)
T ss_pred             HHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcc
Confidence            99999987778999999999999999999999999999877899999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCC-CccCcccccccccccCCC
Q 041507          391 EFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEG-MKLDLSEKFGIVLKKSEP  469 (481)
Q Consensus       391 ~F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~-~~~~~~~~~~~~~~~~~~  469 (481)
                      +|+||||+++++.......+..|+|||+|+|.|+|++||+.|+++++|+||++|+|++.++ .++++.+.++ ++..+++
T Consensus       447 ~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~  525 (543)
T PLN02971        447 SFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKP  525 (543)
T ss_pred             ccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-ccccccc
Confidence            9999999964322111223467999999999999999999999999999999999998765 4677777776 6655668


Q ss_pred             eeEeeeccC
Q 041507          470 LMAIPTARL  478 (481)
Q Consensus       470 ~~~~~~~r~  478 (481)
                      +.+.+.+|.
T Consensus       526 ~~~~~~~~~  534 (543)
T PLN02971        526 LVMVGELRL  534 (543)
T ss_pred             ceeeeeecC
Confidence            999998883


No 6  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=6.1e-78  Score=590.17  Aligned_cols=465  Identities=38%  Similarity=0.693  Sum_probs=371.2

Q ss_pred             cccCCCCCCCCCCCCCccccccCCCCCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCC
Q 041507            5 KSTRRIQPLPPGPRGLPFVGNLPFIEPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPP   84 (481)
Q Consensus         5 ~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~   84 (481)
                      ++.+++.+.||||+++|++|+++.+...++.++.+|+++||++|++++|+.++|+|+||+++++++.++...|+.++. .
T Consensus        29 ~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~-~  107 (516)
T PLN02183         29 SRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPA-N  107 (516)
T ss_pred             hhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCc-c
Confidence            444556789999999999999987765677889999999999999999999999999999999999988777776654 2


Q ss_pred             ccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHHHHHH
Q 041507           85 AAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGKIGSPVNIGELMFLTTLNATT  164 (481)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~vd~~~~~~~~~~~~i~  164 (481)
                      ........++.+++++.+|+.|+++|+++.+++|+.+.++.+.+. .+++..+++.+....++++|+.++++.+++++++
T Consensus       108 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~  186 (516)
T PLN02183        108 IAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNITY  186 (516)
T ss_pred             cchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHH
Confidence            221222222245678888999999999854588999889888875 5689999999965456789999999999999999


Q ss_pred             HHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 041507          165 RMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELAS  244 (481)
Q Consensus       165 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (481)
                      +++||.+++..     ...+.+.+..+............+|++.++......++..+..+.+.+++.+.++++.++..++
T Consensus       187 ~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (516)
T PLN02183        187 RAAFGSSSNEG-----QDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQ  261 (516)
T ss_pred             hHhhcCcccch-----HHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99999876431     2346666655555444334455677665443233456677777888888888888876543211


Q ss_pred             CccccCCccchhHHHHhhcc----------------CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHH
Q 041507          245 GEEKKDGKVSKNFLQFLLKQ----------------SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKA  308 (481)
Q Consensus       245 ~~~~~~~~~~~d~l~~ll~~----------------~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~l  308 (481)
                      ...........|+++.+++.                ..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       262 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl  341 (516)
T PLN02183        262 NADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRV  341 (516)
T ss_pred             ccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHH
Confidence            10000112346889888861                14889999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCC
Q 041507          309 CKELEQVVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKN  388 (481)
Q Consensus       309 r~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~  388 (481)
                      ++|++++++.++.++.+++.+|||++|||+||+|++|++++. .|.+.+|++++|+.||||+.|.++.+++||||++|+|
T Consensus       342 ~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~d  420 (516)
T PLN02183        342 QQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWED  420 (516)
T ss_pred             HHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCC
Confidence            999999987666789999999999999999999999999995 6889999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCC---ccCcccccccccc
Q 041507          389 PLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGM---KLDLSEKFGIVLK  465 (481)
Q Consensus       389 p~~F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~  465 (481)
                      |++|+||||++++.. +...+...|+|||+|+|+|+|++||++|+++++|+|+++|+|++.++.   +.+....++.+..
T Consensus       421 P~~F~PeRfl~~~~~-~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  499 (516)
T PLN02183        421 PDTFKPSRFLKPGVP-DFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAP  499 (516)
T ss_pred             ccccCchhhCCCCCc-cccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccc
Confidence            999999999964331 112244679999999999999999999999999999999999987763   2333334455544


Q ss_pred             cCCCeeEeeeccC
Q 041507          466 KSEPLMAIPTARL  478 (481)
Q Consensus       466 ~~~~~~~~~~~r~  478 (481)
                      +..++.+.+++|-
T Consensus       500 ~~~~~~~~~~~r~  512 (516)
T PLN02183        500 RATRLVAVPTYRL  512 (516)
T ss_pred             cCCCcEEEeecCC
Confidence            5568888888884


No 7  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=6.2e-77  Score=584.42  Aligned_cols=471  Identities=33%  Similarity=0.628  Sum_probs=383.0

Q ss_pred             cccccCCCCCCCCCCCCCccccccCCCCCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCC
Q 041507            3 VKKSTRRIQPLPPGPRGLPFVGNLPFIEPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGD   82 (481)
Q Consensus         3 ~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~   82 (481)
                      ..++.+++.+.||||+++|++||++.+..+++.++.+++++||++|++++++.++++++||+++++++.++...|++++.
T Consensus        23 ~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~  102 (514)
T PLN03112         23 LNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPR  102 (514)
T ss_pred             ccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCC
Confidence            34556677789999999999999988877889999999999999999999999999999999999999888778877665


Q ss_pred             CCccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc--cCCccchHHHHHHHHH
Q 041507           83 PPAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK--IGSPVNIGELMFLTTL  160 (481)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~  160 (481)
                       ........+|...++++.+|+.|+.+|+++.++.|+.++++.+.+.+.++++.+++.+...  .++.+|+.+.++.+++
T Consensus       103 -~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~  181 (514)
T PLN03112        103 -TLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSM  181 (514)
T ss_pred             -cccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHH
Confidence             3222222233334567778999999999976578999999999999999999999987643  4678999999999999


Q ss_pred             HHHHHHHhccccCCCCc--cchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHH
Q 041507          161 NATTRMLWGTSLRGKDR--DIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRM  238 (481)
Q Consensus       161 ~~i~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  238 (481)
                      ++++.++||.++.....  ......+.+.+..+........+..++|++.++......++.++..+.+.+++...+++++
T Consensus       182 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  261 (514)
T PLN03112        182 NNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHR  261 (514)
T ss_pred             HHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998754322  1123456666655554433334445667665543334456677778888888888888877


Q ss_pred             HhhhhcCccccCCccchhHHHHhhcc------CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 041507          239 KDELASGEEKKDGKVSKNFLQFLLKQ------SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKEL  312 (481)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~l~~ll~~------~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei  312 (481)
                      +....+    .......|+++.+++.      ..+++++|.++++.+++||+|||+++++|++++|++||++|+|+++|+
T Consensus       262 ~~~~~~----~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei  337 (514)
T PLN03112        262 RARSGK----LPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEEL  337 (514)
T ss_pred             Hhhccc----ccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            653111    0012346899999871      248999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCC
Q 041507          313 EQVVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEF  392 (481)
Q Consensus       313 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F  392 (481)
                      ++++++++.++++++.+|||++|||+||+|++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|
T Consensus       338 ~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F  417 (514)
T PLN03112        338 DSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEF  417 (514)
T ss_pred             HHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhc
Confidence            99988767789999999999999999999999999986689999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCC-CCC-CCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCC---ccCcccccccccccC
Q 041507          393 QPDRFLKDGEL-GDF-RGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGM---KLDLSEKFGIVLKKS  467 (481)
Q Consensus       393 ~p~R~~~~~~~-~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~  467 (481)
                      |||||...++. ... ......++|||+|+|+|||++||++|++++++.||++|||++..+.   +.+.....++++.++
T Consensus       418 ~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (514)
T PLN03112        418 RPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKA  497 (514)
T ss_pred             CCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccC
Confidence            99998753321 110 1234579999999999999999999999999999999999987552   334444567777788


Q ss_pred             CCeeEeeeccC
Q 041507          468 EPLMAIPTARL  478 (481)
Q Consensus       468 ~~~~~~~~~r~  478 (481)
                      ++++++++||.
T Consensus       498 ~~~~~~~~~r~  508 (514)
T PLN03112        498 KPLRAVATPRL  508 (514)
T ss_pred             CCeEEEeecCC
Confidence            89999999995


No 8  
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.4e-76  Score=572.07  Aligned_cols=453  Identities=26%  Similarity=0.413  Sum_probs=362.7

Q ss_pred             CCCCCCCccccccCCCC-CcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCccceeccc
Q 041507           14 PPGPRGLPFVGNLPFIE-PDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAAAFQATY   92 (481)
Q Consensus        14 ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~   92 (481)
                      ||||+++|++||++.+. .+++.++.+|+++||+||++++|++++++|+||+++++++.++...|..++. ......+..
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~-~~~~~~~~~   79 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKL-SKALTVLTR   79 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCCh-hhHHHHHhc
Confidence            78999999999998884 5689999999999999999999999999999999999999988877877654 222221221


Q ss_pred             CCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc----cCCccchHHHHHHHHHHHHHHHHh
Q 041507           93 GAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK----IGSPVNIGELMFLTTLNATTRMLW  168 (481)
Q Consensus        93 ~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~----~~~~vd~~~~~~~~~~~~i~~~~f  168 (481)
                      ++..+++..+|+.|+.+|+.+.+++++...++.+.+.+.+.+..+++.+...    .++.+|+.+.++.+++|+++.++|
T Consensus        80 ~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~f  159 (466)
T PLN02655         80 DKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQAL  159 (466)
T ss_pred             CCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHh
Confidence            1223444456999999999887788888888888888888888888877542    457799999999999999999999


Q ss_pred             ccccCCCCccch------HHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 041507          169 GTSLRGKDRDIG------DVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDEL  242 (481)
Q Consensus       169 G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  242 (481)
                      |.+++....+..      ...+...+..++.......+.+.+|.+.+++.....+...+....+.++++..++++++...
T Consensus       160 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        160 GEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             ccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            998775432111      12233344444444433344567776665543223333433444455777777777765431


Q ss_pred             hcCccccCCccchhHHHHhhc-cCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcCCcc
Q 041507          243 ASGEEKKDGKVSKNFLQFLLK-QSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVGNDNI  321 (481)
Q Consensus       243 ~~~~~~~~~~~~~d~l~~ll~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~  321 (481)
                      .       .....|+++.+++ ...++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++++. 
T Consensus       240 ~-------~~~~~d~l~~ll~~~~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-  311 (466)
T PLN02655        240 R-------GEERDCYLDFLLSEATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-  311 (466)
T ss_pred             C-------CCCcccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-
Confidence            1       1224589999998 345899999999999999999999999999999999999999999999999987644 


Q ss_pred             ccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccCC
Q 041507          322 VEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDG  401 (481)
Q Consensus       322 ~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~  401 (481)
                      ++.+++.+||||+|||+||||++|+++...+|.+.+|++++|+.||||+.|.++.+++||||++|+||++|+||||++.+
T Consensus       312 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~  391 (466)
T PLN02655        312 VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEK  391 (466)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCC
Confidence            89999999999999999999999999997689999999999999999999999999999999999999999999999753


Q ss_pred             CCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEeeeccCC
Q 041507          402 ELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIPTARLS  479 (481)
Q Consensus       402 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  479 (481)
                      ..   ......++|||+|+|.|||++||+.|+++++++||++|+|++.++. .+.....+++..+++++.+++++|++
T Consensus       392 ~~---~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        392 YE---SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGD-EEKEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             cc---cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCC-ccccchhheeEeecCCcEEEEeecCC
Confidence            22   1234679999999999999999999999999999999999987662 22334567777888899999999986


No 9  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.2e-76  Score=577.50  Aligned_cols=469  Identities=31%  Similarity=0.491  Sum_probs=360.5

Q ss_pred             ccccCCCCCCCCCCCCCccccccCCCCCc-HHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCC
Q 041507            4 KKSTRRIQPLPPGPRGLPFVGNLPFIEPD-LHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGD   82 (481)
Q Consensus         4 ~~~~~~~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~   82 (481)
                      ++...++.+.||||+++|++|++..+..+ .+..+.+|+++||+||++++|++++|+|+||+.+++++.++...|..++.
T Consensus        22 ~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~  101 (503)
T PLN02394         22 SKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTR  101 (503)
T ss_pred             HHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCC
Confidence            44556778899999999999999887544 57899999999999999999999999999999999999887766766654


Q ss_pred             CCccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc---cCCccchHHHHHHHH
Q 041507           83 PPAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK---IGSPVNIGELMFLTT  159 (481)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~---~~~~vd~~~~~~~~~  159 (481)
                       ..........+.+++++.+|+.|+++|+.+..++|+.+.++.+.+.+.++++++++.+...   .++.+++.+.++.++
T Consensus       102 -~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~  180 (503)
T PLN02394        102 -NVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMM  180 (503)
T ss_pred             -cchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHH
Confidence             2222222112335677778999999999986688999999999999999999999999754   234689999999999


Q ss_pred             HHHHHHHHhccccCCCCccchHHHHHHHHHHHHHHhcC--CcccchhccccccCccchHHHHHHHHHHHHHHH-HHHHHH
Q 041507          160 LNATTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGA--PNISDLFPVLARFDVQGVESKAKKHMLLFDKLF-ESSIGS  236 (481)
Q Consensus       160 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~  236 (481)
                      +|+++.++||.+++..+.. ....+.............  ..+..++|++.+.. ....+............+ ...+++
T Consensus       181 ~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~  258 (503)
T PLN02394        181 YNIMYRMMFDRRFESEDDP-LFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDE  258 (503)
T ss_pred             HHHHHHHHhCCCcccccch-hHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998754321 122222222222222111  12233445443221 111222222222222223 334555


Q ss_pred             HHHhhhhcCccccCCccchhHHHHhhc---cCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 041507          237 RMKDELASGEEKKDGKVSKNFLQFLLK---QSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELE  313 (481)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~l~~ll~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~  313 (481)
                      +++......   .+.....|+++.+++   ++.++++++..++.++++||+|||+++++|++|+|++||++|+||++|++
T Consensus       259 ~~~~~~~~~---~~~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~  335 (503)
T PLN02394        259 RKKLMSAKG---MDKEGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELD  335 (503)
T ss_pred             HHHHhhhcc---CCcchhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            544321110   011235789999997   35689999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCC
Q 041507          314 QVVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQ  393 (481)
Q Consensus       314 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~  393 (481)
                      ++.+.++.++++++.+||||+|||+|++|++|++++..+|.+.+|++++||.||+||.|.++.+++||||++|+||++||
T Consensus       336 ~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~  415 (503)
T PLN02394        336 TVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFR  415 (503)
T ss_pred             HHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccC
Confidence            99876667889999999999999999999999999977899999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCC-ccCcccccc-cccccCCCee
Q 041507          394 PDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGM-KLDLSEKFG-IVLKKSEPLM  471 (481)
Q Consensus       394 p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~-~~~~~~~~~~  471 (481)
                      ||||+++++..+.+.....++|||+|+|+|||++||++|+++++|.|+++|+|++.++. +.+..+.++ +....+.++.
T Consensus       416 PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (503)
T PLN02394        416 PERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHST  495 (503)
T ss_pred             ccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCce
Confidence            99999654321112245679999999999999999999999999999999999987774 456555554 5554566899


Q ss_pred             EeeeccC
Q 041507          472 AIPTARL  478 (481)
Q Consensus       472 ~~~~~r~  478 (481)
                      +++.||.
T Consensus       496 ~~~~~r~  502 (503)
T PLN02394        496 VVFKPRS  502 (503)
T ss_pred             EEeecCC
Confidence            9999996


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3.2e-76  Score=575.24  Aligned_cols=452  Identities=23%  Similarity=0.382  Sum_probs=360.1

Q ss_pred             cccCCCCCCCCCCCCCccccccCCCCCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCC
Q 041507            5 KSTRRIQPLPPGPRGLPFVGNLPFIEPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPP   84 (481)
Q Consensus         5 ~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~   84 (481)
                      ++.+...+.+|||+++|++||+..+..+++.++.+++++||+||++++|+.++|+++||+++++++.++...|..++. .
T Consensus        22 ~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~-~  100 (482)
T PTZ00404         22 KYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPK-I  100 (482)
T ss_pred             HhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCC-c
Confidence            344566788999999999999988877899999999999999999999999999999999999999987666665554 3


Q ss_pred             ccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc--cCCccchHHHHHHHHHHH
Q 041507           85 AAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK--IGSPVNIGELMFLTTLNA  162 (481)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~~~  162 (481)
                      ........ +.+ +++.+|+.|+++|+++. +.|+...++.+.+.+.+.+..+++.|.+.  .++.+|+.+++..+++|+
T Consensus       101 ~~~~~~~~-~~~-l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dv  177 (482)
T PTZ00404        101 PSIKHGTF-YHG-IVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSA  177 (482)
T ss_pred             ceeeeecc-CCc-eeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHH
Confidence            22211112 333 45567999999999997 88999999999999999999999998653  466799999999999999


Q ss_pred             HHHHHhccccCCCCc--cchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041507          163 TTRMLWGTSLRGKDR--DIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKD  240 (481)
Q Consensus       163 i~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  240 (481)
                      ++.++||.+++..+.  ......+.+.+..++...........++++.... ........+..+.+.+++.+.++++++.
T Consensus       178 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~  256 (482)
T PTZ00404        178 MFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKT  256 (482)
T ss_pred             HHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999998864321  1122456666666655544333333333322211 1112233445556666666666554432


Q ss_pred             hhhcCccccCCccchhHHHHhhccC-CCCHH---HHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHh
Q 041507          241 ELASGEEKKDGKVSKNFLQFLLKQS-SLSIH---QIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVV  316 (481)
Q Consensus       241 ~~~~~~~~~~~~~~~d~l~~ll~~~-~l~~~---~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~  316 (481)
                      .  +      .....|+++.+++.. ..+++   +|++++..+++||+|||+.+++|++|+|++||++|+|+++|+++++
T Consensus       257 ~--~------~~~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~  328 (482)
T PTZ00404        257 I--D------PEVPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTV  328 (482)
T ss_pred             c--C------CCCcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHh
Confidence            1  0      123568999998732 23333   4889999999999999999999999999999999999999999999


Q ss_pred             cCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccc-cCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCc
Q 041507          317 GNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNL-SGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQPD  395 (481)
Q Consensus       317 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~  395 (481)
                      +++..++++++.+|||++|||+|||||+|+++...+|.+.+|+++ +|+.||||+.|.++.+++||||++||||++||||
T Consensus       329 ~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~Pe  408 (482)
T PTZ00404        329 NGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPS  408 (482)
T ss_pred             cCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCcc
Confidence            876678999999999999999999999999997668999999999 9999999999999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEeee
Q 041507          396 RFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIPT  475 (481)
Q Consensus       396 R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (481)
                      ||++..       .+..|+|||+|+|+|||++||++|++++++.||++|+|++.++.+++.....++++. +.+++|+++
T Consensus       409 Rwl~~~-------~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~  480 (482)
T PTZ00404        409 RFLNPD-------SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLE  480 (482)
T ss_pred             ccCCCC-------CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeee
Confidence            998631       346899999999999999999999999999999999999876654444444566666 457999998


Q ss_pred             cc
Q 041507          476 AR  477 (481)
Q Consensus       476 ~r  477 (481)
                      +|
T Consensus       481 ~R  482 (482)
T PTZ00404        481 KR  482 (482)
T ss_pred             cC
Confidence            87


No 11 
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-76  Score=551.10  Aligned_cols=444  Identities=25%  Similarity=0.393  Sum_probs=354.8

Q ss_pred             CCCCCCCCccccccCCC--CCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCccceec
Q 041507           13 LPPGPRGLPFVGNLPFI--EPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAAAFQA   90 (481)
Q Consensus        13 ~ppgp~~~p~~G~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~   90 (481)
                      -+|+|+++|++||+..+  ...+..+..+...+||+++.+..+.++.++|.||+++++|+.++.+.|.++.. .......
T Consensus        32 Gi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~-~~~~d~~  110 (499)
T KOG0158|consen   32 GIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKR-PIYGDPE  110 (499)
T ss_pred             CCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCC-CCcCCCC
Confidence            67888889999999888  23345555555555599999999999999999999999999999999988432 1111111


Q ss_pred             ccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhccC--CccchHHHHHHHHHHHHHHHHh
Q 041507           91 TYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGKIG--SPVNIGELMFLTTLNATTRMLW  168 (481)
Q Consensus        91 ~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~--~~vd~~~~~~~~~~~~i~~~~f  168 (481)
                      .......++..+|+.||++|..++ |.|++..++.+.+.+.+.++++++.+.+...  ..+++.+.+.+++.|+|++++|
T Consensus       111 ~~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~Af  189 (499)
T KOG0158|consen  111 DPLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAF  189 (499)
T ss_pred             CcccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhc
Confidence            011224567778999999999997 9999999999999999999999999987522  5889999999999999999999


Q ss_pred             ccccCCCCccchHHHHHHHHHHHHHH-hcCCc----ccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 041507          169 GTSLRGKDRDIGDVQIRHVVREIIDL-IGAPN----ISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELA  243 (481)
Q Consensus       169 G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  243 (481)
                      |.+.+...+  ....+.......... .....    ....+|.+....  ..........+.+.+.+...++.|..    
T Consensus       190 G~~~~s~~d--~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~~----  261 (499)
T KOG0158|consen  190 GLDANSLRD--PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQREK----  261 (499)
T ss_pred             ccchhhhcC--chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHHh----
Confidence            999887664  334454434444433 22111    122334333221  01122223333444444455554411    


Q ss_pred             cCccccCCccchhHHHHhhc-cC----------CCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 041507          244 SGEEKKDGKVSKNFLQFLLK-QS----------SLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKEL  312 (481)
Q Consensus       244 ~~~~~~~~~~~~d~l~~ll~-~~----------~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei  312 (481)
                            +.....|+++.+++ ..          .++.++|+++|+.|++||.||||++++.++|+||+||++|+|||+||
T Consensus       262 ------~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI  335 (499)
T KOG0158|consen  262 ------ENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEI  335 (499)
T ss_pred             ------cCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence                  14678999999998 21          59999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCccccc-CeeeCCCCEEEEehhhhccCCCCCCCCCC
Q 041507          313 EQVVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLS-GYSIPKGSIVYVNVWAIHRNPEAWKNPLE  391 (481)
Q Consensus       313 ~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  391 (481)
                      ++++.+...++++.+.+|+||++||+||||+||+++. ..|.+.+|++++ ++.||||+.|.++.+++||||++||||++
T Consensus       336 ~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~  414 (499)
T KOG0158|consen  336 DEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEK  414 (499)
T ss_pred             HHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCccc
Confidence            9998765559999999999999999999999999999 799999999999 99999999999999999999999999999


Q ss_pred             CCCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCccccc---ccccccCC
Q 041507          392 FQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKF---GIVLKKSE  468 (481)
Q Consensus       392 F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~---~~~~~~~~  468 (481)
                      |+||||.+.+.+   ..++..|+|||.|||.|+|.+||.+|+|+.|++||++|+|+..+. .+.. ...   +.++.|++
T Consensus       415 F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~-t~~~-~~~~~~~~~l~pk~  489 (499)
T KOG0158|consen  415 FKPERFEEENNK---SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPT-TIIP-LEGDPKGFTLSPKG  489 (499)
T ss_pred             CCCccCCCCccc---ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCc-ccCc-ccCCccceeeecCC
Confidence            999999976543   346688999999999999999999999999999999999998774 2222 333   78889999


Q ss_pred             CeeEeeeccC
Q 041507          469 PLMAIPTARL  478 (481)
Q Consensus       469 ~~~~~~~~r~  478 (481)
                      ++++++.+|.
T Consensus       490 gi~Lkl~~r~  499 (499)
T KOG0158|consen  490 GIWLKLEPRD  499 (499)
T ss_pred             ceEEEEEeCC
Confidence            9999999984


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.9e-75  Score=571.12  Aligned_cols=463  Identities=30%  Similarity=0.571  Sum_probs=362.8

Q ss_pred             cccCCCCCCCCCCCCCccccccCCC-CCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCC
Q 041507            5 KSTRRIQPLPPGPRGLPFVGNLPFI-EPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDP   83 (481)
Q Consensus         5 ~~~~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~   83 (481)
                      ++.++..+.||||+++|++||++.+ ..+++.++.+|+++||++|++++++.++++++||+++++++.++...|.+++. 
T Consensus        22 ~~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~-  100 (502)
T PLN02966         22 KPKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPP-  100 (502)
T ss_pred             ccccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCC-
Confidence            3445566789999999999999887 44789999999999999999999999999999999999999987766765543 


Q ss_pred             CccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc--cCCccchHHHHHHHHHH
Q 041507           84 PAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK--IGSPVNIGELMFLTTLN  161 (481)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~~  161 (481)
                      .........|.....+..+|+.|+.+|+++.+++|+.+.+..+.+.+.+++.++++.|.+.  .++.+|+.++++.+++|
T Consensus       101 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~d  180 (502)
T PLN02966        101 HRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNS  180 (502)
T ss_pred             CccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHH
Confidence            2222222233334445667999999999944589999999999999999999999999753  45679999999999999


Q ss_pred             HHHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccC-ccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041507          162 ATTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFD-VQGVESKAKKHMLLFDKLFESSIGSRMKD  240 (481)
Q Consensus       162 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  240 (481)
                      +|+.++||.+++..+.  ....+.+.+...........+..++|++..+. ..+..+......+...+++.+.++++.+.
T Consensus       181 vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (502)
T PLN02966        181 VVCRQAFGKKYNEDGE--EMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDP  258 (502)
T ss_pred             HHHHHHhCCccCccch--HHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999875432  23445555554444444434445566433221 11222333344555666666666665432


Q ss_pred             hhhcCccccCCccchhHHHHhhc-------cCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 041507          241 ELASGEEKKDGKVSKNFLQFLLK-------QSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELE  313 (481)
Q Consensus       241 ~~~~~~~~~~~~~~~d~l~~ll~-------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~  313 (481)
                      ..       ......++++.+++       +..++++++.++++++++||+|||+++++|++|+|++||++|+|+++|++
T Consensus       259 ~~-------~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~  331 (502)
T PLN02966        259 KR-------VKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVR  331 (502)
T ss_pred             cc-------cccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            10       01224578888885       13488999999999999999999999999999999999999999999999


Q ss_pred             HHhcC--CccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCC-CCCC
Q 041507          314 QVVGN--DNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAW-KNPL  390 (481)
Q Consensus       314 ~~~~~--~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~  390 (481)
                      +++++  +..++++++.+||||+|||+|+||++|++++..+|.+.+|++++||.||+||.|.++.+++||||++| |||+
T Consensus       332 ~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~  411 (502)
T PLN02966        332 EYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPD  411 (502)
T ss_pred             HHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChh
Confidence            99864  23578999999999999999999999999986689999999999999999999999999999999999 9999


Q ss_pred             CCCCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCC---ccCcccccccccccC
Q 041507          391 EFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGM---KLDLSEKFGIVLKKS  467 (481)
Q Consensus       391 ~F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~  467 (481)
                      +|+||||++.+..  ....+..|+|||+|+|+|+|++||++|+++++|.||++|+|++.++.   .++.+...++...++
T Consensus       412 ~F~PeRwl~~~~~--~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~  489 (502)
T PLN02966        412 EFRPERFLEKEVD--FKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKS  489 (502)
T ss_pred             hCChhhhcCCCCC--cCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccC
Confidence            9999999964321  12245689999999999999999999999999999999999987763   334444556666555


Q ss_pred             CCeeEeeeccCC
Q 041507          468 EPLMAIPTARLS  479 (481)
Q Consensus       468 ~~~~~~~~~r~~  479 (481)
                      .++.++.++-.+
T Consensus       490 ~~~~~~~~~~~~  501 (502)
T PLN02966        490 QHLKLVPEKVNK  501 (502)
T ss_pred             CCeEEEEEeCCC
Confidence            567666655443


No 13 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2e-76  Score=535.93  Aligned_cols=459  Identities=25%  Similarity=0.369  Sum_probs=391.1

Q ss_pred             cCCCCCCCCCCCCCccccccCCC----CCcHHHHHHHHHhhhCCeEEEe-cCCeeEEEecCHHHHHHHHhhCCccccCCC
Q 041507            7 TRRIQPLPPGPRGLPFVGNLPFI----EPDLHSYFAKLSQIYGPIFKLQ-LGRKVCIVISSAPFAKQVLKGHDAIFSNRG   81 (481)
Q Consensus         7 ~~~~~~~ppgp~~~p~~G~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~   81 (481)
                      ..++...+|||+.+|++|.++.+    ..+.|+.....+++||+||+.. +|+.+.|.+.||++++.++++++. ++.|+
T Consensus        45 ~~r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp  123 (519)
T KOG0159|consen   45 RARPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRP  123 (519)
T ss_pred             ccCChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcc
Confidence            34667789999999999998844    4578999999999999999999 888999999999999999998763 34443


Q ss_pred             -CC-CccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc-----cCCccchHHH
Q 041507           82 -DP-PAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK-----IGSPVNIGEL  154 (481)
Q Consensus        82 -~~-~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~-----~~~~vd~~~~  154 (481)
                       .. .+....-.+++..+++..+|+.|++.|..+++.++++++++.|.+.+.+.++++++.++..     .....|+.+.
T Consensus       124 ~~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~  203 (519)
T KOG0159|consen  124 LLIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQE  203 (519)
T ss_pred             cccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHH
Confidence             10 1122222445666778888999999999999899999999999999999999999999876     2346799999


Q ss_pred             HHHHHHHHHHHHHhccccCCCCcc--chHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHH
Q 041507          155 MFLTTLNATTRMLWGTSLRGKDRD--IGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFES  232 (481)
Q Consensus       155 ~~~~~~~~i~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~  232 (481)
                      +.+++++.|+.++||.+++....+  ++...+++++..++......   .+.|.++++...+.|++..++.+.+.++...
T Consensus       204 l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l---~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~  280 (519)
T KOG0159|consen  204 LYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQL---MLMPSLWRYFPTKVWKDFVRAWDQIFDVGDK  280 (519)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHH---HhcchHHHhCCChHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999987652  35677888887777765532   3345555555577899999999999999999


Q ss_pred             HHHHHHHhhhhcCccccCCccchhHHHHhhccCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 041507          233 SIGSRMKDELASGEEKKDGKVSKNFLQFLLKQSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKEL  312 (481)
Q Consensus       233 ~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei  312 (481)
                      .|+.+.++...+..  . .......+..++....++.+++..++++++.||.||||.++.|+||+|++||++|++|++|+
T Consensus       281 ~Id~~l~~l~~~~~--~-~~~~~~~l~~~L~~~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei  357 (519)
T KOG0159|consen  281 YIDNALEELEKQDS--A-GSEYTGSLLELLLRKELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEI  357 (519)
T ss_pred             HHHHHHHHHHhccc--c-ccchhHHHHHHHHHccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHH
Confidence            99999988733311  1 12344555555556889999999999999999999999999999999999999999999999


Q ss_pred             HHHhcC-CccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCC
Q 041507          313 EQVVGN-DNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLE  391 (481)
Q Consensus       313 ~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~  391 (481)
                      .++... +..++.+++.+||||.||||||+||||++++ ..|...+|.+++||.|||||.|.++++.+.+||++|++|++
T Consensus       358 ~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~  436 (519)
T KOG0159|consen  358 LAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEE  436 (519)
T ss_pred             HhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccchhceeccceecCCCeEEEeehhhccChhhCCCccc
Confidence            999987 6778999999999999999999999999999 79999999999999999999999999999999999999999


Q ss_pred             CCCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCee
Q 041507          392 FQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLM  471 (481)
Q Consensus       392 F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  471 (481)
                      |+||||++++.+   ..++..++|||.|+|+|+|+.+|++|+-++||+++++|+++.....+  ......+++.|..++.
T Consensus       437 F~PeRWL~~~~~---~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p--v~~~~~~il~P~~~l~  511 (519)
T KOG0159|consen  437 FLPERWLKPSTK---TIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP--VEYVYRFILVPNRPLR  511 (519)
T ss_pred             cChhhhcccccC---CCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC--ccceeEEEEcCCCCcc
Confidence            999999987622   55789999999999999999999999999999999999999877544  4456678888999999


Q ss_pred             EeeeccC
Q 041507          472 AIPTARL  478 (481)
Q Consensus       472 ~~~~~r~  478 (481)
                      +++++|.
T Consensus       512 f~f~~r~  518 (519)
T KOG0159|consen  512 FKFRPRN  518 (519)
T ss_pred             eeeeeCC
Confidence            9999985


No 14 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=4.3e-75  Score=570.46  Aligned_cols=467  Identities=26%  Similarity=0.447  Sum_probs=365.0

Q ss_pred             cCCCCCCCCCCCCCccccccCCCC---CcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCC
Q 041507            7 TRRIQPLPPGPRGLPFVGNLPFIE---PDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDP   83 (481)
Q Consensus         7 ~~~~~~~ppgp~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~   83 (481)
                      .++..++||||+++|++||+..+.   .+++.++.+|+++||++|++++|+.++++++||+++++++.++...|+.++. 
T Consensus        30 ~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~-  108 (519)
T PLN00168         30 GKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPA-  108 (519)
T ss_pred             CCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCc-
Confidence            345567899999999999997653   3578899999999999999999999999999999999999988877877765 


Q ss_pred             CccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc--cCCccchHHHHHHHHHH
Q 041507           84 PAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK--IGSPVNIGELMFLTTLN  161 (481)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~~  161 (481)
                      .........+...+.+..+|+.|+++||.+..++|+.++++.+.+.+.++++.+++.+.+.  .+..+|+.+.+..++.+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~  188 (519)
T PLN00168        109 VASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFC  188 (519)
T ss_pred             ccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHH
Confidence            3222222211112222367999999998544599999999999999999999999999764  23568999999999999


Q ss_pred             HHHHHHhccccCCCCccchHHHHHHHHHHHHHHh-cCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041507          162 ATTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLI-GAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKD  240 (481)
Q Consensus       162 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  240 (481)
                      +++.++||.+++...    ...+........... ....+...+|.+.+.......++..+..+.+.+++...++++++.
T Consensus       189 ii~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (519)
T PLN00168        189 LLVLMCFGERLDEPA----VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREY  264 (519)
T ss_pred             HHHHHHcCCCcChhh----HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999875321    123333333332222 122344556655433222234556677888888999999887764


Q ss_pred             hhhcCccc--c--CCccchhHHHHhhc-------cCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHH
Q 041507          241 ELASGEEK--K--DGKVSKNFLQFLLK-------QSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKAC  309 (481)
Q Consensus       241 ~~~~~~~~--~--~~~~~~d~l~~ll~-------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr  309 (481)
                      ........  .  +.....|+++.+++       +..+++++|.+++.++++||+|||+++++|++++|++||++|+|++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~  344 (519)
T PLN00168        265 KNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLH  344 (519)
T ss_pred             hhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            31100000  0  00124588998886       1358999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcC-CccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCC
Q 041507          310 KELEQVVGN-DNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKN  388 (481)
Q Consensus       310 ~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~  388 (481)
                      +|+++++++ .+.++++++.+||||+|||+||+|++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|||
T Consensus       345 ~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~  424 (519)
T PLN00168        345 DEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWER  424 (519)
T ss_pred             HHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCC
Confidence            999999875 3568999999999999999999999999998778999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccCCCC--CCC-CCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccc
Q 041507          389 PLEFQPDRFLKDGEL--GDF-RGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLK  465 (481)
Q Consensus       389 p~~F~p~R~~~~~~~--~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  465 (481)
                      |++|+||||++....  .+. ...+..++|||+|+|+|||++||++|++++++.||++|+|++.++.+.+.....+++..
T Consensus       425 p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  504 (519)
T PLN00168        425 PMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTV  504 (519)
T ss_pred             ccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEe
Confidence            999999999974221  011 12345799999999999999999999999999999999999876644444333455666


Q ss_pred             cCCCeeEeeeccC
Q 041507          466 KSEPLMAIPTARL  478 (481)
Q Consensus       466 ~~~~~~~~~~~r~  478 (481)
                      ++.++++++++|.
T Consensus       505 ~~~~~~~~~~~R~  517 (519)
T PLN00168        505 MAKPLRARLVPRR  517 (519)
T ss_pred             ecCCcEEEEEecc
Confidence            7778999999986


No 15 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=8.8e-74  Score=558.25  Aligned_cols=442  Identities=20%  Similarity=0.300  Sum_probs=343.5

Q ss_pred             ccCCCCCCCCCCCCCccccccCCC-----CCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCC
Q 041507            6 STRRIQPLPPGPRGLPFVGNLPFI-----EPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNR   80 (481)
Q Consensus         6 ~~~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~   80 (481)
                      ..+++.+.||||+++|++||++.+     ...++.++.+++++||++|++++|++++|+++||+++++++.++...|..+
T Consensus        32 ~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         32 PKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             cccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            456667899999999999997643     135778899999999999999999999999999999999999876666433


Q ss_pred             CCCCccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhH-hHHHHHHHHHHHHHHHHhccCCccchHHHHHHHH
Q 041507           81 GDPPAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDA-CYAIRQEEVKEMLKEVYGKIGSPVNIGELMFLTT  159 (481)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~l~~l~~~~~~~vd~~~~~~~~~  159 (481)
                      .. .....  ..|+.+ ++..+|+.||.+|+++. +.|+...++. +.+.+.+.+..+++.+..  ++.+|+.+.++.++
T Consensus       112 ~~-~~~~~--~~g~~~-~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~  184 (490)
T PLN02500        112 YP-RSIGG--ILGKWS-MLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFT  184 (490)
T ss_pred             Cc-hHHHH--HhCccc-ccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHH
Confidence            21 11111  123223 34456999999999997 8899888887 567888888888887754  56799999999999


Q ss_pred             HHHHHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 041507          160 LNATTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMK  239 (481)
Q Consensus       160 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  239 (481)
                      ++++++++||.+.+..+    ...+...+.........  ....+|.       ...++..++.+.+.+++.+.++++++
T Consensus       185 ~~vi~~~~fg~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~~~~  251 (490)
T PLN02500        185 FNLMAKHIMSMDPGEEE----TEQLKKEYVTFMKGVVS--APLNFPG-------TAYRKALKSRATILKFIERKMEERIE  251 (490)
T ss_pred             HHHHHHHHhCCCCCchH----HHHHHHHHHHHHhhhhc--chhcCCC-------cccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998754321    12333333322222111  0011221       11245556777888888888888776


Q ss_pred             hhhhcCccccCCccchhHHHHhhccCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhc--
Q 041507          240 DELASGEEKKDGKVSKNFLQFLLKQSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVG--  317 (481)
Q Consensus       240 ~~~~~~~~~~~~~~~~d~l~~ll~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~--  317 (481)
                      +...+    .......|+++.+++...++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++++  
T Consensus       252 ~~~~~----~~~~~~~d~l~~ll~~~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~  327 (490)
T PLN02500        252 KLKEE----DESVEEDDLLGWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAK  327 (490)
T ss_pred             hhhcc----cCCCCcchHHHHHHhccCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhcc
Confidence            54211    101234699999998777999999999999999999999999999999999999999999999998863  


Q ss_pred             ---CCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 041507          318 ---NDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQP  394 (481)
Q Consensus       318 ---~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p  394 (481)
                         ++..++++++.+|||++|||+||+|++|+++. .+|.+.+|++++||.||||+.|.++.+++||||++|+||++|||
T Consensus       328 ~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~P  406 (490)
T PLN02500        328 KQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNP  406 (490)
T ss_pred             ccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccCh
Confidence               23457899999999999999999999999998 57999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCC----CCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCe
Q 041507          395 DRFLKDGELGDF----RGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPL  470 (481)
Q Consensus       395 ~R~~~~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  470 (481)
                      |||+++++..+.    ...+..|+|||+|+|.|||++||++|+++++|.||++|+|++.++... . . ...+ .++.++
T Consensus       407 eRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~-~-~~~~-~~~~~l  482 (490)
T PLN02500        407 WRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-F-A-FPFV-DFPKGL  482 (490)
T ss_pred             hhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-e-e-cccc-cCCCCc
Confidence            999965332110    123567999999999999999999999999999999999998765321 1 1 2233 334588


Q ss_pred             eEeeec
Q 041507          471 MAIPTA  476 (481)
Q Consensus       471 ~~~~~~  476 (481)
                      +|++++
T Consensus       483 ~~~~~~  488 (490)
T PLN02500        483 PIRVRR  488 (490)
T ss_pred             eEEEEe
Confidence            988865


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.3e-72  Score=549.82  Aligned_cols=463  Identities=28%  Similarity=0.460  Sum_probs=348.8

Q ss_pred             CCCCCCCCCCCccccccCCCC-CcHH-HHHHHHHhhh-CCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCcc
Q 041507           10 IQPLPPGPRGLPFVGNLPFIE-PDLH-SYFAKLSQIY-GPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAA   86 (481)
Q Consensus        10 ~~~~ppgp~~~p~~G~~~~~~-~~~~-~~~~~~~~ky-G~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~   86 (481)
                      ..++||||+++|++||++.+. .++. .++.++.++| |+||++++|++++|+|+||+++++++.++...|+.++. ...
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~-~~~  116 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQ-LSI  116 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCC-chh
Confidence            345899999999999998873 2332 3455666666 79999999999999999999999999988877887765 332


Q ss_pred             ceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc--cCCccchHHHHHHHHHHHHH
Q 041507           87 AFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK--IGSPVNIGELMFLTTLNATT  164 (481)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~~~i~  164 (481)
                      ......++.++++..+|+.|+.+|+++...+++......+.+....++.++++.+.+.  .+.++|+.+.++.+++++++
T Consensus       117 ~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  196 (534)
T PLN03018        117 METIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTM  196 (534)
T ss_pred             hhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHH
Confidence            2222222234666667999999999997433444444445555566788899888753  35679999999999999999


Q ss_pred             HHHhccccCCCCc-----cchHHHHHHHHHHHHHH---hcCCcccchhc-cccccCccchHHHHHHHHHHHHHHHHHHHH
Q 041507          165 RMLWGTSLRGKDR-----DIGDVQIRHVVREIIDL---IGAPNISDLFP-VLARFDVQGVESKAKKHMLLFDKLFESSIG  235 (481)
Q Consensus       165 ~~~fG~~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  235 (481)
                      +++||.++.....     ......+..........   .......+.+| ++.++.......+.......+.+++.+.++
T Consensus       197 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  276 (534)
T PLN03018        197 RMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIID  276 (534)
T ss_pred             HHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999854221     00111122222222221   11112223344 443222222334455556678888888888


Q ss_pred             HHHHhhhhcCccccCCccchhHHHHhhc---c-C--CCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHH
Q 041507          236 SRMKDELASGEEKKDGKVSKNFLQFLLK---Q-S--SLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKAC  309 (481)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~---~-~--~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr  309 (481)
                      ++++...++    .......|+++.+++   + +  .++++++++++.++++||+|||+.+++|++++|+.||++|+|++
T Consensus       277 ~~~~~~~~~----~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~  352 (534)
T PLN03018        277 ERVELWREK----GGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKAL  352 (534)
T ss_pred             HHHHHhhhc----cCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            877643111    001224689998886   1 2  38999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCC
Q 041507          310 KELEQVVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNP  389 (481)
Q Consensus       310 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p  389 (481)
                      +|++++++.++.++.+++.+|||++|||+||+|++|+++...+|.+.+|++++||.||||+.|.++.+++||||++|+||
T Consensus       353 ~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p  432 (534)
T PLN03018        353 KELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDP  432 (534)
T ss_pred             HHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCc
Confidence            99999997666788999999999999999999999999986679999999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCCCC---CCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCC-ccCcccccccccc
Q 041507          390 LEFQPDRFLKDGELG---DFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGM-KLDLSEKFGIVLK  465 (481)
Q Consensus       390 ~~F~p~R~~~~~~~~---~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~  465 (481)
                      ++|+||||++.++..   .....+..++|||+|+|.|||++||.+|+++++|.||++|+|++.++. +++.....+.+..
T Consensus       433 ~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  512 (534)
T PLN03018        433 LVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLLM  512 (534)
T ss_pred             cccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccceec
Confidence            999999999643210   011234679999999999999999999999999999999999986652 3333333344444


Q ss_pred             cCCCeeEeeeccC
Q 041507          466 KSEPLMAIPTARL  478 (481)
Q Consensus       466 ~~~~~~~~~~~r~  478 (481)
                       +.++++++++|.
T Consensus       513 -p~~~~v~~~~R~  524 (534)
T PLN03018        513 -AKPLLLSVEPRL  524 (534)
T ss_pred             -CCCeEEEEEecc
Confidence             458999999994


No 17 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=8.8e-74  Score=562.37  Aligned_cols=444  Identities=22%  Similarity=0.315  Sum_probs=349.8

Q ss_pred             CCCCCCCCCCccccccCCCCC-------------------cHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHh
Q 041507           11 QPLPPGPRGLPFVGNLPFIEP-------------------DLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLK   71 (481)
Q Consensus        11 ~~~ppgp~~~p~~G~~~~~~~-------------------~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~   71 (481)
                      ...||||+++|++||++.+..                   +....+.+|+++||++|++++|+.++++++||+++++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            456999999999999877632                   1223568899999999999999999999999999999999


Q ss_pred             hCCccccCCCCCCccc-eecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc---cCC
Q 041507           72 GHDAIFSNRGDPPAAA-FQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK---IGS  147 (481)
Q Consensus        72 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~---~~~  147 (481)
                      ++.. +..++. .... ..... +.+ ++..+|+.|+++|+++. +.|+..+++.+.+.+.++++.+++.+.+.   ++.
T Consensus       121 ~~~~-~~~r~~-~~~~~~~~~~-g~~-l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  195 (516)
T PLN02290        121 KYNT-VTGKSW-LQQQGTKHFI-GRG-LLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQT  195 (516)
T ss_pred             cCCC-CCCCcc-hhhhHHHHHh-cCC-ccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            7633 333432 1111 11112 334 45557999999999997 88999999999999999999999999753   235


Q ss_pred             ccchHHHHHHHHHHHHHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHH
Q 041507          148 PVNIGELMFLTTLNATTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFD  227 (481)
Q Consensus       148 ~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~  227 (481)
                      .+|+.+.++.+++|+++.++||.++...+      .+.+.+..+............+|++.+++ .+..+...+..+.+.
T Consensus       196 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~  268 (516)
T PLN02290        196 EVEIGEYMTRLTADIISRTEFDSSYEKGK------QIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGEVE  268 (516)
T ss_pred             eEEhHHHHHHHHHHHHHHHHcCCccccch------HHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHH
Confidence            79999999999999999999999875321      22222222222211111112344443332 223455666777888


Q ss_pred             HHHHHHHHHHHHhhhhcCccccCCccchhHHHHhhcc--------CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHh
Q 041507          228 KLFESSIGSRMKDELASGEEKKDGKVSKNFLQFLLKQ--------SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELL  299 (481)
Q Consensus       228 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~--------~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~  299 (481)
                      +++.+.|+++++....+.    +.....|+++.+++.        ..++++++.+++.++++||+|||+++++|++++|+
T Consensus       269 ~~~~~~i~~~~~~~~~~~----~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~  344 (516)
T PLN02290        269 RLLMEIIQSRRDCVEIGR----SSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLA  344 (516)
T ss_pred             HHHHHHHHHHHHHhhccc----CCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence            888999988876542110    112356899988862        13788999999999999999999999999999999


Q ss_pred             hCcHHHHHHHHHHHHHhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhh
Q 041507          300 QHPEIMRKACKELEQVVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAI  379 (481)
Q Consensus       300 ~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~  379 (481)
                      +||++|+|+++|++++++++ .++++++++||||+|||+||+|++|+++. .+|.+.+|++++|+.||||+.|.++.+++
T Consensus       345 ~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~  422 (516)
T PLN02290        345 SNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAI  422 (516)
T ss_pred             cCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHh
Confidence            99999999999999998754 78999999999999999999999999997 69999999999999999999999999999


Q ss_pred             ccCCCCC-CCCCCCCCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCccc
Q 041507          380 HRNPEAW-KNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSE  458 (481)
Q Consensus       380 ~~d~~~~-~~p~~F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~  458 (481)
                      ||||++| +||++||||||++...     .....|+|||+|+|+|||++||++|++++++.||++|+|++.++.+  ...
T Consensus       423 ~rdp~~~~~dP~~F~PeRfl~~~~-----~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~--~~~  495 (516)
T PLN02290        423 HHSEELWGKDANEFNPDRFAGRPF-----APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR--HAP  495 (516)
T ss_pred             cCChhhhCCChhhcCccccCCCCC-----CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc--cCc
Confidence            9999999 8999999999995321     1235799999999999999999999999999999999999876522  222


Q ss_pred             ccccccccCCCeeEeeeccCC
Q 041507          459 KFGIVLKKSEPLMAIPTARLS  479 (481)
Q Consensus       459 ~~~~~~~~~~~~~~~~~~r~~  479 (481)
                      ...++..|++++++++++|..
T Consensus       496 ~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        496 VVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             cceeeecCCCCCeEEEEeCCC
Confidence            346788888999999999864


No 18 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=9e-74  Score=552.40  Aligned_cols=455  Identities=27%  Similarity=0.447  Sum_probs=363.0

Q ss_pred             CCCCCCCCCCCccccccCCCC---CcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCcc
Q 041507           10 IQPLPPGPRGLPFVGNLPFIE---PDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAA   86 (481)
Q Consensus        10 ~~~~ppgp~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~   86 (481)
                      +...||||+++|++|++..+.   .+...++.++..+||++|+.++|+.++++++||+.+++|+.+....+...+. +..
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~-~~~  111 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPD-YPE  111 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchh-HHH
Confidence            567899999999999999883   3577889999999999999999999999999999999999755444433222 221


Q ss_pred             ceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc-cCCccchHHHHHHHHHHHHHH
Q 041507           87 AFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK-IGSPVNIGELMFLTTLNATTR  165 (481)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~-~~~~vd~~~~~~~~~~~~i~~  165 (481)
                      ......| .+++++. |+.|+++|+++. ++|+...++.+...+.+....++..+... .++.+|+.+.++++++|+|+.
T Consensus       112 ~~~~~lG-~gll~~~-g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~  188 (497)
T KOG0157|consen  112 SLKPWLG-DGLLFSD-GEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICK  188 (497)
T ss_pred             HHHHHhc-CccccCC-chHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHH
Confidence            2222333 3666666 999999999997 99999999999999999999988887765 333499999999999999999


Q ss_pred             HHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhc-cccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 041507          166 MLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFP-VLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELAS  244 (481)
Q Consensus       166 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (481)
                      ++||....+.+.+ ....+..++......+..   ....| +..++...+..++..++.+.+.++++++|++|+++..++
T Consensus       189 ~~~G~~~~~~~~~-~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~  264 (497)
T KOG0157|consen  189 TAMGPESLDAEGP-ELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKE  264 (497)
T ss_pred             HhcCCccccccCC-cccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999222111111 223455555544433321   12233 222222233678889999999999999999999876433


Q ss_pred             CccccCCccchhHHHHhhc--cCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcCCc-c
Q 041507          245 GEEKKDGKVSKNFLQFLLK--QSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVGNDN-I  321 (481)
Q Consensus       245 ~~~~~~~~~~~d~l~~ll~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~-~  321 (481)
                      ...+  .....|+++.+..  +..+++++|.+++.+|++||+||||++++|+++.|+.||++|+|+++|+.++++++. .
T Consensus       265 ~~~~--~~~~~d~L~~~~~~~~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~  342 (497)
T KOG0157|consen  265 GSGE--EKKRLDFLDTLLLEEDKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDK  342 (497)
T ss_pred             CCcc--cchhhhHHHHHHHhccCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCC
Confidence            2111  2456788885333  357999999999999999999999999999999999999999999999999997432 2


Q ss_pred             ccccccCcchhHHHHHHhhccCCCCCccccccCCCCccccc-CeeeCCCCEEEEehhhhccCCCCCC-CCCCCCCccccc
Q 041507          322 VEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLS-GYSIPKGSIVYVNVWAIHRNPEAWK-NPLEFQPDRFLK  399 (481)
Q Consensus       322 ~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~-~p~~F~p~R~~~  399 (481)
                      .+.....+|+||++||+|||||+|++|. ..|.+.+|+.++ ||.||||+.|.++.+++|||+.+|+ ||++||||||++
T Consensus       343 ~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~  421 (497)
T KOG0157|consen  343 WEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLD  421 (497)
T ss_pred             CChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCC
Confidence            2333333699999999999999999999 689999999994 8999999999999999999999996 999999999997


Q ss_pred             CCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEeeeccCC
Q 041507          400 DGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIPTARLS  479 (481)
Q Consensus       400 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  479 (481)
                      ++...  ..++..|+|||+|+|.|+|++||++|+|++++.||++|+|++..+..  ......+++++.++++|++++|.+
T Consensus       422 ~~~~~--~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  422 GEEKA--KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             CCCcC--CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCCC
Confidence            54321  33568899999999999999999999999999999999999877643  556688999999999999999974


No 19 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.6e-74  Score=564.15  Aligned_cols=447  Identities=30%  Similarity=0.525  Sum_probs=362.8

Q ss_pred             CCCCCCCccccccCCCC--CcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCcccee--
Q 041507           14 PPGPRGLPFVGNLPFIE--PDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAAAFQ--   89 (481)
Q Consensus        14 ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~~~~--   89 (481)
                      ||||+++|++||+..+.  +++++++.+++++||+||+++++++++++|+||+++++++.++...++.++. ......  
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~-~~~~~~~~   79 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPR-PPWFEIFR   79 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHC-HHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccc-cccccccc
Confidence            89999999999999885  7899999999999999999999999999999999999999988766665432 222221  


Q ss_pred             cccCCceEEeCCCChhHHHHHHHHHHHhcccc-hhhHhHHHHHHHHHHHHHHHHhccC--CccchHHHHHHHHHHHHHHH
Q 041507           90 ATYGAIDIAFSPNCPEWRTLRKVFVREMMSNS-GLDACYAIRQEEVKEMLKEVYGKIG--SPVNIGELMFLTTLNATTRM  166 (481)
Q Consensus        90 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~~l~~l~~~~~--~~vd~~~~~~~~~~~~i~~~  166 (481)
                      ...++.+ ++..+|+.|+.+|+++. +.|+.. .+ .+.+.+.+.++.+++.+....+  +.+|+.++++.+++++++.+
T Consensus        80 ~~~~~~~-l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~  156 (463)
T PF00067_consen   80 GPFGGKG-LFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRV  156 (463)
T ss_dssp             HHHTTTS-STTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHH
T ss_pred             ccccccc-ccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeecccccccccccccc
Confidence            1223444 44455799999999997 777766 66 8999999999999999988633  36999999999999999999


Q ss_pred             HhccccCCCCccchHHHHHHHHHHHHHHhcC--CcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 041507          167 LWGTSLRGKDRDIGDVQIRHVVREIIDLIGA--PNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELAS  244 (481)
Q Consensus       167 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (481)
                      +||.+++..+.+ ....+.+.+..+...+..  ..+...+|++.+++ ....+...++.+.+.+++.+.++++.++...+
T Consensus       157 ~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  234 (463)
T PF00067_consen  157 LFGKDFGSLDDE-DFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREELDDG  234 (463)
T ss_dssp             HHSSHHHGTTHH-HHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSS
T ss_pred             cccceeeecccc-cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence            999998754432 234566666666554432  12455677555543 44566777788889999999999988876222


Q ss_pred             CccccCCccchhHHHHhhccC-------CCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhc
Q 041507          245 GEEKKDGKVSKNFLQFLLKQS-------SLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVG  317 (481)
Q Consensus       245 ~~~~~~~~~~~d~l~~ll~~~-------~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~  317 (481)
                            .....|+++.+++..       .+++++++++++.+++||++||+.+++|++++|++||++|+++++|++++.+
T Consensus       235 ------~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~  308 (463)
T PF00067_consen  235 ------DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLG  308 (463)
T ss_dssp             ------SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTT
T ss_pred             ------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                  245788888888842       7899999999999999999999999999999999999999999999999997


Q ss_pred             CCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCccc
Q 041507          318 NDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQPDRF  397 (481)
Q Consensus       318 ~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~  397 (481)
                      ++..++.+++.+||||+|||+||+|++|+++..++|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+||||
T Consensus       309 ~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~  388 (463)
T PF00067_consen  309 DGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERF  388 (463)
T ss_dssp             TSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGG
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            66789999999999999999999999999995578999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEee
Q 041507          398 LKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIP  474 (481)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  474 (481)
                      ++.+..  .......++|||.|+|.|||++||+.|+++++|.||++|||++.++...........+..++.++.|.+
T Consensus       389 ~~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  389 LDERGI--SNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             BTTTST--BCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             cccccc--cccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence            986541  124567899999999999999999999999999999999999976533333332223334444666653


No 20 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=9.6e-72  Score=538.35  Aligned_cols=437  Identities=19%  Similarity=0.259  Sum_probs=345.5

Q ss_pred             cCCCCCCCCCCCCCccccccCCC-----CCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCC
Q 041507            7 TRRIQPLPPGPRGLPFVGNLPFI-----EPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRG   81 (481)
Q Consensus         7 ~~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~   81 (481)
                      .+++.+.||||.++|++||++.+     ..+++.++.+|+++||+||++++|+++++|++||+++++++.++...+..+.
T Consensus         2 ~~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          2 SKKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            46777889999999999999876     2468999999999999999999999999999999999999998877666442


Q ss_pred             CCCccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhH-hHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHH
Q 041507           82 DPPAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDA-CYAIRQEEVKEMLKEVYGKIGSPVNIGELMFLTTL  160 (481)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~l~~l~~~~~~~vd~~~~~~~~~~  160 (481)
                      . .. ... ..|. ..++..+|+.||++|+++. +.|+...+.. +.+.+.+.+.++++.+.  .++.+++.+.+..+++
T Consensus        82 ~-~~-~~~-l~g~-~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         82 P-KS-LTE-LMGK-SSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR--DDPPVLVQDETKKIAF  154 (452)
T ss_pred             c-hh-HHH-HhCc-ccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc--CCCCEEhHHHHHHHHH
Confidence            2 11 111 2232 3455667999999999997 7787776765 45677777777777653  3568999999999999


Q ss_pred             HHHHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041507          161 NATTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKD  240 (481)
Q Consensus       161 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  240 (481)
                      +++++++||.+.+.     ....+.+.+..+.....      .+|.+  ++ .....+..++.+.+.+++.+.|+++++.
T Consensus       155 ~vi~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~------~~~~~--~p-~~~~~~~~~~~~~l~~~~~~~i~~~~~~  220 (452)
T PLN03141        155 EVLVKALISLEPGE-----EMEFLKKEFQEFIKGLM------SLPIK--LP-GTRLYRSLQAKKRMVKLVKKIIEEKRRA  220 (452)
T ss_pred             HHHHHHHcCCCchH-----HHHHHHHHHHHHhhhHH------hCccC--CC-chHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999976532     12233333333332211      12211  11 1112445567888999999999888765


Q ss_pred             hhhcCccccCCccchhHHHHhhc--cCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhc-
Q 041507          241 ELASGEEKKDGKVSKNFLQFLLK--QSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVG-  317 (481)
Q Consensus       241 ~~~~~~~~~~~~~~~d~l~~ll~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~-  317 (481)
                      ...+.  ........|+++.+++  +..+++++|+.+++.+++||+|||+.+++|++++|+.||++|+++++|++++.+ 
T Consensus       221 ~~~~~--~~~~~~~~d~l~~ll~~~~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~  298 (452)
T PLN03141        221 MKNKE--EDETGIPKDVVDVLLRDGSDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRL  298 (452)
T ss_pred             HhccC--ccccCChhhHHHHHHhcCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhc
Confidence            42110  0001124689999988  345899999999999999999999999999999999999999999999988753 


Q ss_pred             ---CCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 041507          318 ---NDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQP  394 (481)
Q Consensus       318 ---~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p  394 (481)
                         .+..++.+++.+||||+|||+|++|++|+++. .+|.+.+|++++||.||||+.|.++.+++|+||++|+||++|+|
T Consensus       299 ~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~P  377 (452)
T PLN03141        299 KADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNP  377 (452)
T ss_pred             cCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCc
Confidence               23457888999999999999999999999986 68999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEee
Q 041507          395 DRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIP  474 (481)
Q Consensus       395 ~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  474 (481)
                      |||++.+.      .+..|+|||+|+|.|+|++||++|+++++|.|+++|+|++.++...     ...++.|+.++.|++
T Consensus       378 eRfl~~~~------~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~  446 (452)
T PLN03141        378 WRWQEKDM------NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFPTVRMKRKLPIWV  446 (452)
T ss_pred             ccccCCCC------CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecccccCCCCceEEE
Confidence            99996422      3467999999999999999999999999999999999998665321     124778888999999


Q ss_pred             eccC
Q 041507          475 TARL  478 (481)
Q Consensus       475 ~~r~  478 (481)
                      ++|.
T Consensus       447 ~~~~  450 (452)
T PLN03141        447 TRID  450 (452)
T ss_pred             EeCC
Confidence            9985


No 21 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.8e-71  Score=537.56  Aligned_cols=430  Identities=18%  Similarity=0.247  Sum_probs=340.4

Q ss_pred             ccCCCCCCCCCCCCCccccccCCCCCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCc
Q 041507            6 STRRIQPLPPGPRGLPFVGNLPFIEPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPA   85 (481)
Q Consensus         6 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~   85 (481)
                      ..+++.+.||||+++|++||++.+..+++.++.+++++||++|++++|++++++++||+++++++.++...+..... ..
T Consensus        25 ~~~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~  103 (463)
T PLN02774         25 VRYSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYP-QS  103 (463)
T ss_pred             hccCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCC-HH
Confidence            34455678899999999999988767788899999999999999999999999999999999999877655532211 11


Q ss_pred             cceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhH-hHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHHHHHH
Q 041507           86 AAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDA-CYAIRQEEVKEMLKEVYGKIGSPVNIGELMFLTTLNATT  164 (481)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~l~~l~~~~~~~vd~~~~~~~~~~~~i~  164 (481)
                      ...  .+|+ +++++.+|+.|+.+|+.+. +.|++..++. +.+.+.+.+.+++++|..  ++.+|+.+.+..+++++++
T Consensus       104 ~~~--~lg~-~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~  177 (463)
T PLN02774        104 MLD--ILGT-CNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG--LKTIDIQEKTKEMALLSAL  177 (463)
T ss_pred             HHH--HhCc-cchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCCEEeeHHHHHHHHHHHH
Confidence            111  1233 3445557999999999996 8899988876 789999888898888753  4679999999999999999


Q ss_pred             HHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 041507          165 RMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELAS  244 (481)
Q Consensus       165 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (481)
                      .++||.+...     ....+.+.+..+   .... .  .+|.  +++ ....++..++.+.+.+++.+.+++++++.   
T Consensus       178 ~~~~g~~~~~-----~~~~~~~~~~~~---~~~~-~--~~~~--~lp-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---  240 (463)
T PLN02774        178 KQIAGTLSKP-----ISEEFKTEFFKL---VLGT-L--SLPI--DLP-GTNYRSGVQARKNIVRMLRQLIQERRASG---  240 (463)
T ss_pred             HHHcCCCChH-----HHHHHHHHHHHH---hccc-c--cCCc--CCC-ChhhhHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence            9999976431     112222222222   1110 0  1121  111 11234556677888888888888776431   


Q ss_pred             CccccCCccchhHHHHhhcc----CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcC--
Q 041507          245 GEEKKDGKVSKNFLQFLLKQ----SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVGN--  318 (481)
Q Consensus       245 ~~~~~~~~~~~d~l~~ll~~----~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~--  318 (481)
                             ....|+++.+++.    ..+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.  
T Consensus       241 -------~~~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~  313 (463)
T PLN02774        241 -------ETHTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKR  313 (463)
T ss_pred             -------CCcccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccC
Confidence                   2246899998862    248999999999999999999999999999999999999999999999999753  


Q ss_pred             -CccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCccc
Q 041507          319 -DNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQPDRF  397 (481)
Q Consensus       319 -~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~  397 (481)
                       +..++++++.+|||++|||+|++|++|+++. ..|.+.+|++++||.||||+.|.++.+.+||||++|+||++|+||||
T Consensus       314 ~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRf  392 (463)
T PLN02774        314 PEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRW  392 (463)
T ss_pred             CCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhc
Confidence             3467899999999999999999999999987 57999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEeeec
Q 041507          398 LKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIPTA  476 (481)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  476 (481)
                      ++++..     ....|+|||+|+|.|||++||++|++++++.||++|+|++.++...  ..  ..+..|+++++|+++|
T Consensus       393 l~~~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~--~~--~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        393 LDKSLE-----SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL--MK--FPRVEAPNGLHIRVSP  462 (463)
T ss_pred             CCCCcC-----CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc--cc--CCCCCCCCCceEEeee
Confidence            964321     1235999999999999999999999999999999999999766321  11  1234477889998874


No 22 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=7.1e-71  Score=543.09  Aligned_cols=446  Identities=22%  Similarity=0.374  Sum_probs=338.6

Q ss_pred             cccCCC-CCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCccceecccCCceEEeCCC
Q 041507           24 GNLPFI-EPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAAAFQATYGAIDIAFSPN  102 (481)
Q Consensus        24 G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (481)
                      ||+..+ .+.++..+.+++++||+||++++|+.++++|+||+.+++|+.++...|..++. .... ... .+.+ +++.+
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~-~~~~-~~~-~g~~-l~~~d  218 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGIL-AEIL-EFV-MGKG-LIPAD  218 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcch-HHHH-hhc-cCCc-eecCC
Confidence            444445 45578899999999999999999998999999999999999977665654432 1111 111 2333 45567


Q ss_pred             ChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc--cCCccchHHHHHHHHHHHHHHHHhccccCCCCccc-
Q 041507          103 CPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK--IGSPVNIGELMFLTTLNATTRMLWGTSLRGKDRDI-  179 (481)
Q Consensus       103 g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~-  179 (481)
                      |+.|+.+|+.+. +.|+...+..+.+.+.+.++.+++.+.+.  .++.+|+.+.++.+++|+|+.++||.+++....+. 
T Consensus       219 ge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~  297 (633)
T PLN02738        219 GEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTG  297 (633)
T ss_pred             cHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchH
Confidence            999999999997 89999999999999999999999999764  56789999999999999999999999987543221 


Q ss_pred             hHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcc---ccCCccchh
Q 041507          180 GDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELASGEE---KKDGKVSKN  256 (481)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~d  256 (481)
                      ....+.+.+...............+|.+..++  ...++..+..+.+.++....++.+++...+....   ........|
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~d  375 (633)
T PLN02738        298 IVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPS  375 (633)
T ss_pred             HHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccch
Confidence            11222222222211111111111223222221  1224444555566666666665544321111000   000123468


Q ss_pred             HHHHhhc-cCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcCCccccccccCcchhHHH
Q 041507          257 FLQFLLK-QSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVGNDNIVEEVHTVKLHYLNA  335 (481)
Q Consensus       257 ~l~~ll~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a  335 (481)
                      +++.|++ +..++++++.++++.+++||+|||+.+++|++++|++||++|+|||+|++++++ +..++++++++||||+|
T Consensus       376 il~~Ll~~~~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~kLPYL~A  454 (633)
T PLN02738        376 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLKYTTR  454 (633)
T ss_pred             HHHHHHHcCCCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHccCHHHHH
Confidence            9999987 346899999999999999999999999999999999999999999999999987 46689999999999999


Q ss_pred             HHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccCCCCCCCCCCCcceec
Q 041507          336 ILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLP  415 (481)
Q Consensus       336 ~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~  415 (481)
                      ||+|+|||+|+++. ..|.+.+|.+++||.||+||.|.++.+.+||||++||||++|+||||+..+...+.......++|
T Consensus       455 VIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vp  533 (633)
T PLN02738        455 VINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLP  533 (633)
T ss_pred             HHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeC
Confidence            99999999999999 56888999999999999999999999999999999999999999999853221111234568999


Q ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEeeeccCC
Q 041507          416 FGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIPTARLS  479 (481)
Q Consensus       416 Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  479 (481)
                      ||.|+|.|+|++||++|+++++|.|+++|+|++.++.+ +.....+.+..++.++++++++|.+
T Consensus       534 FG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        534 FGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             CCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCC
Confidence            99999999999999999999999999999999876632 2233345677788899999999964


No 23 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.5e-71  Score=538.03  Aligned_cols=444  Identities=19%  Similarity=0.314  Sum_probs=334.4

Q ss_pred             CCCCCCCCccccccCCCCC---cHHHHHHHHHhhhCCeEE---EecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCcc
Q 041507           13 LPPGPRGLPFVGNLPFIEP---DLHSYFAKLSQIYGPIFK---LQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAA   86 (481)
Q Consensus        13 ~ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~kyG~v~~---~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~   86 (481)
                      -.|||+++|++||+..+..   ..++++.+..++||..++   +++|+.++++|+||+.+++|+.++...|.+++. +..
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~-~~~  110 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPE-FKK  110 (500)
T ss_pred             CCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHH-HHH
Confidence            5788999999999976632   244555555556887665   577899999999999999999987666654432 211


Q ss_pred             ceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHh--HHHHHHHHHHHHHHHHhc--cCCccchHHHHHHHHHHH
Q 041507           87 AFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDAC--YAIRQEEVKEMLKEVYGK--IGSPVNIGELMFLTTLNA  162 (481)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~~~  162 (481)
                      .  ....+.+ +++.+|+.|+.+|+++. +.|+...+..+  .+.+.+.++.+++.+.+.  .+..+|+.+.+.++++|+
T Consensus       111 ~--~~~~g~g-l~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dv  186 (500)
T PLN02169        111 I--FDVLGEG-ILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDT  186 (500)
T ss_pred             H--HHhhcCc-ccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHH
Confidence            1  1112344 44556999999999997 99998776543  356667777788777643  467899999999999999


Q ss_pred             HHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhcccc----ccCccchHHHHHHHHHHHHHHHHHHHHHHH
Q 041507          163 TTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLA----RFDVQGVESKAKKHMLLFDKLFESSIGSRM  238 (481)
Q Consensus       163 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  238 (481)
                      |+.++||.+.+..+.+.....+.+.+........   ...+.|++.    .++..+..++..++.+.+.+++.+.|++++
T Consensus       187 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~  263 (500)
T PLN02169        187 SSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRR  263 (500)
T ss_pred             HHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987643321112234444333332211   111223211    111233456778888899999999999887


Q ss_pred             HhhhhcCccccCCccchhHHHHhhcc--------CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHH
Q 041507          239 KDELASGEEKKDGKVSKNFLQFLLKQ--------SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACK  310 (481)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~l~~ll~~--------~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~  310 (481)
                      ++..+..   +.+....|+++.+++.        ..++++++.+++.++++||+|||+++++|++|+|+.||++|+|+++
T Consensus       264 ~~~~~~~---~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~  340 (500)
T PLN02169        264 KEEISRA---ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRH  340 (500)
T ss_pred             HHhhccc---cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            6431110   0012246888888872        1367889999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCc-ccccCeeeCCCCEEEEehhhhccCCCCC-CC
Q 041507          311 ELEQVVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTT-CNLSGYSIPKGSIVYVNVWAIHRNPEAW-KN  388 (481)
Q Consensus       311 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~-~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~~  388 (481)
                      |+++++      +++++.+||||+|||+|||||+|+++.. .|.+.+| +.++|+.||||+.|.++.+++||||++| +|
T Consensus       341 Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~-~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~d  413 (500)
T PLN02169        341 EINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFN-HKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGED  413 (500)
T ss_pred             HHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcC-ceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCC
Confidence            998763      5788999999999999999999999995 5555555 4459999999999999999999999999 89


Q ss_pred             CCCCCCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCC
Q 041507          389 PLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSE  468 (481)
Q Consensus       389 p~~F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  468 (481)
                      |++||||||+++++... ...+..|+|||+|+|+|+|++||++|+++++|.||++|+|++.++.++  ....++++.++.
T Consensus       414 P~~F~PeRfl~~~~~~~-~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~~~~~l~~~~  490 (500)
T PLN02169        414 ALDFKPERWISDNGGLR-HEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAIPSILLRMKH  490 (500)
T ss_pred             hhhcCccccCCCCCCcc-CCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccccceEEecCC
Confidence            99999999996533210 123578999999999999999999999999999999999998765433  334567888899


Q ss_pred             CeeEeeecc
Q 041507          469 PLMAIPTAR  477 (481)
Q Consensus       469 ~~~~~~~~r  477 (481)
                      ++++++++|
T Consensus       491 gl~l~l~~~  499 (500)
T PLN02169        491 GLKVTVTKK  499 (500)
T ss_pred             CEEEEEEeC
Confidence            999999987


No 24 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.9e-71  Score=545.32  Aligned_cols=451  Identities=19%  Similarity=0.290  Sum_probs=337.5

Q ss_pred             CCCCCCCCccccccCCCCCcHHHHHHHHHhhh---CCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCcccee
Q 041507           13 LPPGPRGLPFVGNLPFIEPDLHSYFAKLSQIY---GPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAAAFQ   89 (481)
Q Consensus        13 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~~~~   89 (481)
                      .+|||+++|++||++.+..+ +..+.+|.++|   |++|++++|+.++++++||+++++|+.++...+...+. +.....
T Consensus        31 ~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~~~~~  108 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEV-YHSYME  108 (516)
T ss_pred             ccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHh-HHHHHH
Confidence            47899999999998765333 34567777777   89999999999999999999999999876444543321 111111


Q ss_pred             cccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHH-HHHHHHHHHHHHhc--cCCccchHHHHHHHHHHHHHHH
Q 041507           90 ATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIR-QEEVKEMLKEVYGK--IGSPVNIGELMFLTTLNATTRM  166 (481)
Q Consensus        90 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~~~i~~~  166 (481)
                      ... +.+ +++.+|+.|+.+|+++. +.|+..+++.+.+.+ .+.++.+++.+...  .++.+|+.++++.+++|+++.+
T Consensus       109 ~~~-g~~-l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  185 (516)
T PLN03195        109 VLL-GDG-IFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV  185 (516)
T ss_pred             HHh-cCe-eeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence            112 333 55667999999999997 889999999998876 55566676666532  4667999999999999999999


Q ss_pred             HhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhcc--ccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 041507          167 LWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPV--LARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELAS  244 (481)
Q Consensus       167 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (481)
                      +||.+++..+.+.....+.+.+.........   ....|.  +.++......+...+..+.+.+++.+.++++++....+
T Consensus       186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (516)
T PLN03195        186 GFGVEIGTLSPSLPENPFAQAFDTANIIVTL---RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA  262 (516)
T ss_pred             HhCCCccccccCCCccHHHHHHHHHHHHHHH---HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999987554321112344333333221110   001121  11111111234445667778888888888877654211


Q ss_pred             CccccCCccchhHHHHhhc-----cCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcC-
Q 041507          245 GEEKKDGKVSKNFLQFLLK-----QSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVGN-  318 (481)
Q Consensus       245 ~~~~~~~~~~~d~l~~ll~-----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~-  318 (481)
                      ..  ..+....|+++.+++     +..+++++++++++++++||+|||+++++|++|+|++||++|+||++|+++++++ 
T Consensus       263 ~~--~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  340 (516)
T PLN03195        263 RK--SGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKER  340 (516)
T ss_pred             cc--ccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc
Confidence            00  011235689999986     2358999999999999999999999999999999999999999999999987642 


Q ss_pred             -------------------CccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccc-cCeeeCCCCEEEEehhh
Q 041507          319 -------------------DNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNL-SGYSIPKGSIVYVNVWA  378 (481)
Q Consensus       319 -------------------~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~  378 (481)
                                         ++.++++++.+||||+|||+||||++|+++.. .|.+.+|.++ +|+.||||+.|.++.++
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~  419 (516)
T PLN03195        341 AKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYS  419 (516)
T ss_pred             cccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHh
Confidence                               23578899999999999999999999999995 5555565554 99999999999999999


Q ss_pred             hccCCCCC-CCCCCCCCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcc
Q 041507          379 IHRNPEAW-KNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLS  457 (481)
Q Consensus       379 ~~~d~~~~-~~p~~F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~  457 (481)
                      +||||++| +||++|+||||++.+...  ...+..|+|||+|+|+|+|++||++|+++++|.|+++|+|++.++.+..  
T Consensus       420 ~h~dp~~~g~dP~~F~PeRwl~~~~~~--~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~--  495 (516)
T PLN03195        420 MGRMEYNWGPDAASFKPERWIKDGVFQ--NASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVK--  495 (516)
T ss_pred             hccChhhhccChhhcCCcccCCCCCcC--CCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcce--
Confidence            99999999 999999999999632210  1234579999999999999999999999999999999999987654332  


Q ss_pred             cccccccccCCCeeEeeeccC
Q 041507          458 EKFGIVLKKSEPLMAIPTARL  478 (481)
Q Consensus       458 ~~~~~~~~~~~~~~~~~~~r~  478 (481)
                      .....+..++.+++|++++|.
T Consensus       496 ~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        496 YRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             eeeeeEEecCCCEEEEEEeCC
Confidence            333456678889999999884


No 25 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1e-69  Score=528.04  Aligned_cols=457  Identities=21%  Similarity=0.337  Sum_probs=354.5

Q ss_pred             CCCCCCCCCCccccccCCC-----CCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCc
Q 041507           11 QPLPPGPRGLPFVGNLPFI-----EPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPA   85 (481)
Q Consensus        11 ~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~   85 (481)
                      .++-.|-.+||++|..+.+     .+.++.++.+|+++||+||++++|+.++++++||+++++++.+....|..++. ..
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~-~~   89 (489)
T PLN02936         11 NRLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLV-AE   89 (489)
T ss_pred             hccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcch-hh
Confidence            3466788899999988776     56789999999999999999999999999999999999999876666665432 21


Q ss_pred             cceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHH-HHHHHHHHHHHHHHhc--cCCccchHHHHHHHHHHH
Q 041507           86 AAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYA-IRQEEVKEMLKEVYGK--IGSPVNIGELMFLTTLNA  162 (481)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~l~~~--~~~~vd~~~~~~~~~~~~  162 (481)
                      ... ... +.+ ++..+|+.|+++|+++. +.|+...++.+.+ .+.++++.+++.+.+.  .++.+|+.+.++.+++++
T Consensus        90 ~~~-~~~-~~~-i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dv  165 (489)
T PLN02936         90 VSE-FLF-GSG-FAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDV  165 (489)
T ss_pred             hhH-HHh-cCc-cccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHH
Confidence            111 112 333 44566999999999997 8888878887755 6788889999998764  467899999999999999


Q ss_pred             HHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhcccccc---CccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 041507          163 TTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARF---DVQGVESKAKKHMLLFDKLFESSIGSRMK  239 (481)
Q Consensus       163 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  239 (481)
                      ++.++||.+++..+.+   ..+.+.+...+..... .....+|++...   ...+..++..++.+.+.+++.+.++++++
T Consensus       166 i~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~  241 (489)
T PLN02936        166 IGLSVFNYNFDSLTTD---SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKE  241 (489)
T ss_pred             HHHHHcCCCccccccC---cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999764432   1233333332222111 111223332110   00112456667778888888888887765


Q ss_pred             hhhhcCccc--c--CCccchhHHHHhhcc-CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q 041507          240 DELASGEEK--K--DGKVSKNFLQFLLKQ-SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQ  314 (481)
Q Consensus       240 ~~~~~~~~~--~--~~~~~~d~l~~ll~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~  314 (481)
                      ...+.....  .  ......|+++.+++. ..++.++|.++++.+++||+|||+++++|++|+|++||++|+++|+|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~  321 (489)
T PLN02936        242 IVEAEGEVIEGEEYVNDSDPSVLRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDR  321 (489)
T ss_pred             HHhhcccccccccccccCchHHHHHHHhccccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            432111000  0  012357899999884 46899999999999999999999999999999999999999999999999


Q ss_pred             HhcCCccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCC
Q 041507          315 VVGNDNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQP  394 (481)
Q Consensus       315 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p  394 (481)
                      +++. ..++++++.+||||+|||+||+|++|+++...+|.+.+|+.++|+.||+|+.|+++.+.+||||++|+||++|+|
T Consensus       322 ~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~P  400 (489)
T PLN02936        322 VLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVP  400 (489)
T ss_pred             HhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCc
Confidence            9874 457889999999999999999999999998777777788888999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEee
Q 041507          395 DRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIP  474 (481)
Q Consensus       395 ~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  474 (481)
                      |||++..........+..++|||.|+|.|||++||++|++++++.|+++|++++.++++++.  ..+++..++.+++|++
T Consensus       401 eRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~  478 (489)
T PLN02936        401 ERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM--TTGATIHTTNGLYMTV  478 (489)
T ss_pred             cccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce--ecceEEeeCCCeEEEE
Confidence            99996432111122345799999999999999999999999999999999999877644332  2356667778999999


Q ss_pred             eccCC
Q 041507          475 TARLS  479 (481)
Q Consensus       475 ~~r~~  479 (481)
                      ++|..
T Consensus       479 ~~R~~  483 (489)
T PLN02936        479 SRRRV  483 (489)
T ss_pred             EeeeC
Confidence            99974


No 26 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.3e-69  Score=524.25  Aligned_cols=425  Identities=21%  Similarity=0.328  Sum_probs=342.5

Q ss_pred             CCCCCCCCCCCCccccccCCC-CCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCccc
Q 041507            9 RIQPLPPGPRGLPFVGNLPFI-EPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAAA   87 (481)
Q Consensus         9 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~~   87 (481)
                      ++.+.||||+++|++||+..+ ..+++.++.+++++||++|+++++++++|+++||+++++++.++...+.  +. ....
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~-~~~~  108 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PT-FPAS  108 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--cc-CchH
Confidence            345678899999999998765 5789999999999999999999999999999999999999988766553  22 2111


Q ss_pred             eecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHHHHHHHHH
Q 041507           88 FQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGKIGSPVNIGELMFLTTLNATTRML  167 (481)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~vd~~~~~~~~~~~~i~~~~  167 (481)
                      .....|. ..++..+|+.|+++|+++. +.|++++++.+.+.+.+.+.++++.|.   ++.+|+.++++.+++++++.++
T Consensus       109 ~~~~~g~-~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~~  183 (463)
T PLN02196        109 KERMLGK-QAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLSI  183 (463)
T ss_pred             HHHHcCc-ccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHHH
Confidence            1122333 3455567999999999997 889999999999999999999998874   4579999999999999999999


Q ss_pred             hccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcc
Q 041507          168 WGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELASGEE  247 (481)
Q Consensus       168 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  247 (481)
                      ||.+....     ...+.+....+..      ....+|+.  ++ ....++..++.+.+.+++.+.+++++++.      
T Consensus       184 fG~~~~~~-----~~~~~~~~~~~~~------~~~~~~~~--~p-~~~~~~~~~a~~~~~~~~~~~i~~~~~~~------  243 (463)
T PLN02196        184 FGKDEVLY-----REDLKRCYYILEK------GYNSMPIN--LP-GTLFHKSMKARKELAQILAKILSKRRQNG------  243 (463)
T ss_pred             cCCCCchH-----HHHHHHHHHHHhc------chhccccc--CC-CccchHHHHHHHHHHHHHHHHHHHHhhcC------
Confidence            99875311     1122222211111      01112321  11 12235566777788888888887765431      


Q ss_pred             ccCCccchhHHHHhhcc-CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcC---Ccccc
Q 041507          248 KKDGKVSKNFLQFLLKQ-SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVGN---DNIVE  323 (481)
Q Consensus       248 ~~~~~~~~d~l~~ll~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~---~~~~~  323 (481)
                          ....|+++.+++. .+++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++.+.   +..++
T Consensus       244 ----~~~~d~l~~ll~~~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~  319 (463)
T PLN02196        244 ----SSHNDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLT  319 (463)
T ss_pred             ----CCcccHHHHHHhcCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCC
Confidence                2346899988873 568999999999999999999999999999999999999999999999988753   35678


Q ss_pred             ccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccCCCC
Q 041507          324 EVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGEL  403 (481)
Q Consensus       324 ~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~  403 (481)
                      .+++.+|||++|||+|++|++|+++.. .|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++..  
T Consensus       320 ~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~--  396 (463)
T PLN02196        320 WEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP--  396 (463)
T ss_pred             HHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC--
Confidence            899999999999999999999999984 69899999999999999999999999999999999999999999999522  


Q ss_pred             CCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEeeec
Q 041507          404 GDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIPTA  476 (481)
Q Consensus       404 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  476 (481)
                           .+..++|||+|+|.|+|+++|++|++++++.|+++|+|++.++ +.+.  ....+..|+.+++|+++.
T Consensus       397 -----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~-~~~~--~~~~~~~p~~~~~~~~~~  461 (463)
T PLN02196        397 -----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGT-SNGI--QYGPFALPQNGLPIALSR  461 (463)
T ss_pred             -----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCC-CCce--EEcccccCCCCceEEEec
Confidence                 3467999999999999999999999999999999999998765 2233  234455688888988864


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.9e-69  Score=520.84  Aligned_cols=440  Identities=20%  Similarity=0.253  Sum_probs=341.4

Q ss_pred             cccccCCCCCCCCCCCCCccccccCCCC-----CcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccc
Q 041507            3 VKKSTRRIQPLPPGPRGLPFVGNLPFIE-----PDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIF   77 (481)
Q Consensus         3 ~~~~~~~~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~   77 (481)
                      +.|+...+.++||||.++|++||++.+.     .+++.++.+++++||++|+++++++++++|+||+++++++.++...|
T Consensus        21 ~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f  100 (472)
T PLN02987         21 LRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLF  100 (472)
T ss_pred             HHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceE
Confidence            3455556667899999999999998762     46889999999999999999999999999999999999999887666


Q ss_pred             cCCCCCCccceecccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHH-HHHHHHHHHHHHHHhccCCccchHHHHH
Q 041507           78 SNRGDPPAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYA-IRQEEVKEMLKEVYGKIGSPVNIGELMF  156 (481)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~l~~~~~~~vd~~~~~~  156 (481)
                      ..+.. ....  ..+|+.++ +..+|+.|+++|+++. ++++.+.+..+.. .+.+.+...++.|    .+.+++.+.++
T Consensus       101 ~~~~~-~~~~--~~lg~~~l-~~~~g~~wr~~R~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~  171 (472)
T PLN02987        101 ECSYP-GSIS--NLLGKHSL-LLMKGNLHKKMHSLTM-SFANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAK  171 (472)
T ss_pred             EecCc-HHHH--HHhCcccc-cccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHH
Confidence            54322 1111  12233344 4447999999999975 6544444444331 2333334444443    24689999999


Q ss_pred             HHHHHHHHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHH
Q 041507          157 LTTLNATTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGS  236 (481)
Q Consensus       157 ~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  236 (481)
                      +++++++++++||.+....     ...+...+.......    ....+|++     ....++..++.+.+.+++.+.+++
T Consensus       172 ~~t~~vi~~~~fg~~~~~~-----~~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~  237 (472)
T PLN02987        172 KITFELTVKQLMSFDPGEW-----TESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTLVVMK  237 (472)
T ss_pred             HHHHHHHHHHHcCCCChHH-----HHHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999765321     122222222222111    12224443     123567778888899999999998


Q ss_pred             HHHhhhhcCccccCCccchhHHHHhhcc-CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q 041507          237 RMKDELASGEEKKDGKVSKNFLQFLLKQ-SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQV  315 (481)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~  315 (481)
                      +++....+      .....|+++.+++. .+++++++.++++.+++||+|||+.+++|++++|++||++|+++++|++++
T Consensus       238 r~~~~~~~------~~~~~d~l~~ll~~~~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~  311 (472)
T PLN02987        238 RRKEEEEG------AEKKKDMLAALLASDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKI  311 (472)
T ss_pred             HHhhhhcc------CcccccHHHHHHhcCCCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence            87653111      12356899999873 468999999999999999999999999999999999999999999999988


Q ss_pred             hcC---CccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCC
Q 041507          316 VGN---DNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEF  392 (481)
Q Consensus       316 ~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F  392 (481)
                      .+.   +..++.+++.+|||++||++|++|++|+++. ..|.+.+|++++||.||+|+.|.++.+.+|+||++|+||++|
T Consensus       312 ~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F  390 (472)
T PLN02987        312 RAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTF  390 (472)
T ss_pred             HcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCcccc
Confidence            742   3457888999999999999999999999986 579999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeE
Q 041507          393 QPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMA  472 (481)
Q Consensus       393 ~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  472 (481)
                      |||||+++...   ......++|||+|+|.|||++||+.|++++++.||++|+|+++++.+  .  ....+..|.+++++
T Consensus       391 ~PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~--~~~~~~~p~~~~~~  463 (472)
T PLN02987        391 NPWRWQSNSGT---TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK--L--VFFPTTRTQKRYPI  463 (472)
T ss_pred             CcccCCCCCCC---CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc--e--eecccccCCCCceE
Confidence            99999975332   12346799999999999999999999999999999999999876643  2  22447788889999


Q ss_pred             eeeccCC
Q 041507          473 IPTARLS  479 (481)
Q Consensus       473 ~~~~r~~  479 (481)
                      ++++|..
T Consensus       464 ~~~~r~~  470 (472)
T PLN02987        464 NVKRRDV  470 (472)
T ss_pred             EEEeccc
Confidence            9999975


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.7e-68  Score=523.58  Aligned_cols=436  Identities=22%  Similarity=0.289  Sum_probs=343.1

Q ss_pred             cCCCCCCCCCCCCCccccccCCC-----CCcHHHHHHHHHhhhCC--eEEEecCCeeEEEecCHHHHHHHHhhCCccccC
Q 041507            7 TRRIQPLPPGPRGLPFVGNLPFI-----EPDLHSYFAKLSQIYGP--IFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSN   79 (481)
Q Consensus         7 ~~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~   79 (481)
                      ...+.+.||||+++|++|+++.+     ..+++.++.+++++||+  +|++++++.++++++||+++++++.++. .|..
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-cccc
Confidence            45556789999999999998766     34689999999999997  7999999999999999999999998764 3432


Q ss_pred             CCCCCccceecccCCceEEeCCCChhHHHHHHHHHHHhc-ccchhhHhHHHHHHHHHHHHHHHHhccCCccchHHHHHHH
Q 041507           80 RGDPPAAAFQATYGAIDIAFSPNCPEWRTLRKVFVREMM-SNSGLDACYAIRQEEVKEMLKEVYGKIGSPVNIGELMFLT  158 (481)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~vd~~~~~~~~  158 (481)
                      +.. .....  .+|. ..+...+|+.|+++|+.+. +.| +.+.++.+.+.+.+.+.++++.+..  ++.+|+.+.++.+
T Consensus       116 ~~~-~~~~~--~~g~-~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~  188 (490)
T PLN02302        116 GWP-ESTVE--LIGR-KSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKL  188 (490)
T ss_pred             CCc-hhHHH--Hhcc-ccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHH
Confidence            221 11111  2232 3344456999999999997 667 4678999999999999999999864  4569999999999


Q ss_pred             HHHHHHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHH
Q 041507          159 TLNATTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRM  238 (481)
Q Consensus       159 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  238 (481)
                      ++++++.++||.++...     ...+.+........+..  ....+|.       ...++..++.+.+.+++.+.+++++
T Consensus       189 ~~~vi~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~~  254 (490)
T PLN02302        189 TFKIIMYIFLSSESELV-----MEALEREYTTLNYGVRA--MAINLPG-------FAYHRALKARKKLVALFQSIVDERR  254 (490)
T ss_pred             HHHHHHHHHcCCCChHH-----HHHHHHHHHHHHHHhhh--CCcCCCc-------hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999876421     12222222222111111  0001111       1123445566778888888888887


Q ss_pred             HhhhhcCccccCCccchhHHHHhhcc-----CCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHH
Q 041507          239 KDELASGEEKKDGKVSKNFLQFLLKQ-----SSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELE  313 (481)
Q Consensus       239 ~~~~~~~~~~~~~~~~~d~l~~ll~~-----~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~  313 (481)
                      +.....     ......|+++.+++.     ..+++++|.++++.+++||+|||+++++|++++|++||++|+|+++|++
T Consensus       255 ~~~~~~-----~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~  329 (490)
T PLN02302        255 NSRKQN-----ISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQE  329 (490)
T ss_pred             Hhhhcc-----CCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            653111     112457899999862     3489999999999999999999999999999999999999999999999


Q ss_pred             HHhcCC----ccccccccCcchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCC
Q 041507          314 QVVGND----NIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNP  389 (481)
Q Consensus       314 ~~~~~~----~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p  389 (481)
                      ++++..    ..++++++.+||||+|||+|++|++|+++. ..|.+.+|++++|+.||||+.|.++.+++||||++|+||
T Consensus       330 ~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP  408 (490)
T PLN02302        330 EIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNP  408 (490)
T ss_pred             HHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCc
Confidence            987632    136888999999999999999999999998 578899999999999999999999999999999999999


Q ss_pred             CCCCCcccccCCCCCCCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCC
Q 041507          390 LEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEP  469 (481)
Q Consensus       390 ~~F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  469 (481)
                      ++|+||||++..      ..+..++|||+|+|.|+|++||.+|++++++.|+++|+|++.++. .+..  ......|..+
T Consensus       409 ~~F~PeR~~~~~------~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~  479 (490)
T PLN02302        409 KEFDPSRWDNYT------PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVM--YLPHPRPKDN  479 (490)
T ss_pred             cccChhhcCCCC------CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccce--eCCCCCCCCC
Confidence            999999999632      244679999999999999999999999999999999999986542 2222  2233677889


Q ss_pred             eeEeeeccCC
Q 041507          470 LMAIPTARLS  479 (481)
Q Consensus       470 ~~~~~~~r~~  479 (481)
                      +++++++|.|
T Consensus       480 ~~~~~~~~~~  489 (490)
T PLN02302        480 CLARITKVAS  489 (490)
T ss_pred             ceEEEEeccC
Confidence            9999999976


No 29 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-68  Score=472.37  Aligned_cols=442  Identities=23%  Similarity=0.348  Sum_probs=356.7

Q ss_pred             CCCC-CCCCCccccccCCCCCcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCccceec
Q 041507           12 PLPP-GPRGLPFVGNLPFIEPDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAAAFQA   90 (481)
Q Consensus        12 ~~pp-gp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~   90 (481)
                      ..|| .-.|+||+|++..|+++|.+++++.++|||+||++.++|+.+.++.+|+....++.+....++-... +......
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~-~~~l~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEA-YSKLTTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHH-HHHhhhh
Confidence            3555 4568999999999999999999999999999999999999999999999999999887444332111 1112222


Q ss_pred             ccCCceEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHH-HHhccCCccchHHHHHHHHHHHHHHHHhc
Q 041507           91 TYGAIDIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKE-VYGKIGSPVNIGELMFLTTLNATTRMLWG  169 (481)
Q Consensus        91 ~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~-l~~~~~~~vd~~~~~~~~~~~~i~~~~fG  169 (481)
                      .+ |.+++.........++.+++. ..+...+++++.+.|.++..+.++. +.+ +|..-.+.++...+.+.+.-.++||
T Consensus       110 vF-g~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~  186 (486)
T KOG0684|consen  110 VF-GKGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGG  186 (486)
T ss_pred             hc-CCCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhh
Confidence            33 334555555566677777775 7789999999999999999999988 433 5666778888888888888888888


Q ss_pred             cccCCCCccchHHHHHHHHHHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcccc
Q 041507          170 TSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELASGEEKK  249 (481)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  249 (481)
                      +.....+     ........++...+.  .+...||.  +++ ....++..++++.+.+.+...+.++++..        
T Consensus       187 e~r~~~d-----~~~a~l~~dLd~~F~--~~d~~FP~--~LP-~~~~r~~~ra~~~i~k~f~~~i~~rr~s~--------  248 (486)
T KOG0684|consen  187 EVRDQLD-----ADVAKLYHDLDQGFQ--PFDFLFPY--NLP-IPLLRRRDRARKKISKIFSKIILDRRASI--------  248 (486)
T ss_pred             hhhhhhc-----chHHHHHHHHhcccc--chHhhccc--CCC-cchhhhHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence            8766533     234444444444332  23445663  222 23346666899999999999999999876        


Q ss_pred             CCccchhHHHHhhc----cCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcCCcc-ccc
Q 041507          250 DGKVSKNFLQFLLK----QSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVGNDNI-VEE  324 (481)
Q Consensus       250 ~~~~~~d~l~~ll~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~-~~~  324 (481)
                       +....|+++.+++    +...+++|++..++.++|||+.||+.+.+|++++|++|||+++.+++|+++++++... +++
T Consensus       249 -s~~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~  327 (486)
T KOG0684|consen  249 -SKWDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTY  327 (486)
T ss_pred             -ccccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCH
Confidence             4556778887777    5678999999999999999999999999999999999999999999999999987554 999


Q ss_pred             cccCcchhHHHHHHhhccCCCCCccccccCCCCcccccC----eeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccC
Q 041507          325 VHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSG----YSIPKGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKD  400 (481)
Q Consensus       325 ~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g----~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~  400 (481)
                      ++|++||+|++||+|||||+||.+. +.|.+.+|.++.+    |.||+|..|.++++.+||||++|+||+.|+|+||+++
T Consensus       328 d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~  406 (486)
T KOG0684|consen  328 DQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKD  406 (486)
T ss_pred             HHHhcchHHHHHHHHHHhcCCchhh-HHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCC
Confidence            9999999999999999999999988 6799999999965    9999999999999999999999999999999999975


Q ss_pred             CCCC--CCCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEeeeccC
Q 041507          401 GELG--DFRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIPTARL  478 (481)
Q Consensus       401 ~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  478 (481)
                      +++.  ....-...|+|||+|.|.|||++||.+|+|.++..+|+.||++++++ +++......+++.|.++|+|+.+.|.
T Consensus       407 ~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  407 NGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCHHHhhcCCCCCceEEEeecC
Confidence            5432  12233456799999999999999999999999999999999999997 33322334458889999999999885


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3.6e-67  Score=509.04  Aligned_cols=441  Identities=19%  Similarity=0.248  Sum_probs=337.7

Q ss_pred             CCccccccCCCCCcHHHHHHHHHhhhC-CeEEEecCCeeEEEecCHHHHHHHHhhCCccccCCCCCCccceecccCCceE
Q 041507           19 GLPFVGNLPFIEPDLHSYFAKLSQIYG-PIFKLQLGRKVCIVISSAPFAKQVLKGHDAIFSNRGDPPAAAFQATYGAIDI   97 (481)
Q Consensus        19 ~~p~~G~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (481)
                      ..++.|+......+.++++.++.++++ .+++++.++.  ++++||+.+++++..+...|.+... +........ +.+ 
T Consensus        48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~-~~~~~~~~~-g~g-  122 (502)
T PLN02426         48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKP-FSAILGDLL-GRG-  122 (502)
T ss_pred             CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHh-HHHHHHHhc-CCc-
Confidence            356888887765667888888888887 5788877664  8999999999999876555653321 211111122 334 


Q ss_pred             EeCCCChhHHHHHHHHHHHhcccchhhHhH--HHHHHHHHHHHHHHHhc----cCCccchHHHHHHHHHHHHHHHHhccc
Q 041507           98 AFSPNCPEWRTLRKVFVREMMSNSGLDACY--AIRQEEVKEMLKEVYGK----IGSPVNIGELMFLTTLNATTRMLWGTS  171 (481)
Q Consensus        98 ~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~--~~~~~~~~~~l~~l~~~----~~~~vd~~~~~~~~~~~~i~~~~fG~~  171 (481)
                      +++.+|+.|+.+||.+. +.|+.++++.+.  +.+.+.++++++.+.+.    .+..+|+.++++.+++|+|+.++||.+
T Consensus       123 i~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~  201 (502)
T PLN02426        123 IFNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD  201 (502)
T ss_pred             eeecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence            45567999999999996 889988888764  56677777787777543    236799999999999999999999999


Q ss_pred             cCCCCccchHHHHHHHHHHHHHHhcCCcccchhcccc---ccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCccc
Q 041507          172 LRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPVLA---RFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELASGEEK  248 (481)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  248 (481)
                      ++..+.+.....+.+.+......... .....+|+++   .+...+..++..++.+.+.+++.+.|+++++..       
T Consensus       202 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~-------  273 (502)
T PLN02426        202 PGCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG-------  273 (502)
T ss_pred             CcccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence            87654321223444444443322110 0011122221   111123346677788888999999998877642       


Q ss_pred             cCCccchhHHHHhhccCCCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcCC-cccccccc
Q 041507          249 KDGKVSKNFLQFLLKQSSLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVGND-NIVEEVHT  327 (481)
Q Consensus       249 ~~~~~~~d~l~~ll~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~-~~~~~~~l  327 (481)
                        .....|+++.+++.. .+++++.++++++++||+|||+++++|++|+|++||++|+|+++|++++++.+ ..++++++
T Consensus       274 --~~~~~dll~~ll~~~-~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l  350 (502)
T PLN02426        274 --FSASKDLLSRFMASI-NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEM  350 (502)
T ss_pred             --cCCcchHHHHHHhcC-CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHH
Confidence              123569999999843 47889999999999999999999999999999999999999999999988753 36799999


Q ss_pred             CcchhHHHHHHhhccCCCCCccccccCCCCcccc-cCeeeCCCCEEEEehhhhccCCCCC-CCCCCCCCcccccCCCCCC
Q 041507          328 VKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNL-SGYSIPKGSIVYVNVWAIHRNPEAW-KNPLEFQPDRFLKDGELGD  405 (481)
Q Consensus       328 ~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~~~~  405 (481)
                      .+||||+|||+|+||++|+++.. .|.+.+|.++ +|+.||+|+.|.++.+++||||++| |||++|+||||++++..  
T Consensus       351 ~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~--  427 (502)
T PLN02426        351 KEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVF--  427 (502)
T ss_pred             hcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCc--
Confidence            99999999999999999999984 6888888777 8999999999999999999999999 99999999999974321  


Q ss_pred             CCCCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEeeeccCC
Q 041507          406 FRGNNFNYLPFGSGRRVCVGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIPTARLS  479 (481)
Q Consensus       406 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  479 (481)
                      ....+..++|||+|+|.|+|++||++|++++++.|+++|+|++.++.........++++.++++++|++++|..
T Consensus       428 ~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~~  501 (502)
T PLN02426        428 VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERVR  501 (502)
T ss_pred             CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEccC
Confidence            02234679999999999999999999999999999999999986442212233346788889999999999863


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.2e-60  Score=454.24  Aligned_cols=406  Identities=16%  Similarity=0.215  Sum_probs=295.3

Q ss_pred             CCCCCCCCCCCCCccccccCCC-----CCcHHHHHHHHHhhhCC-eEEEecCCeeE-------EEecCHHHHHHHHhh--
Q 041507            8 RRIQPLPPGPRGLPFVGNLPFI-----EPDLHSYFAKLSQIYGP-IFKLQLGRKVC-------IVISSAPFAKQVLKG--   72 (481)
Q Consensus         8 ~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvv~d~~~~~~i~~~--   72 (481)
                      ..+.+.|||+.++|++|++..|     ..++..++.+.++|||+ ||+++++|.++       |+++||++++.+|.+  
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~   92 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSK   92 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchh
Confidence            4556779999999999999865     44568999999999998 99999998655       999999999999985  


Q ss_pred             --CCccccCCCCCCccceecccCCc--eEEeCCCChhHHHHHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhc--cC
Q 041507           73 --HDAIFSNRGDPPAAAFQATYGAI--DIAFSPNCPEWRTLRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGK--IG  146 (481)
Q Consensus        73 --~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~w~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~--~~  146 (481)
                        +...+...   +..... .+|+.  ..++..+|+.|+++|+++. +.|+ ..++.+.+.|.+.+.++++.|...  .+
T Consensus        93 ~~~~~~~~~~---~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~-~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~  166 (480)
T PLN02648         93 VDKRDVFTGT---YMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLF-ELLK-SRHRRFIPEFRAAFAELFDTWEAELAKK  166 (480)
T ss_pred             ccccccceee---eccCcc-ccCCceeeeecCCCCchHHHHHHHHH-HHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhC
Confidence              33333321   111122 33433  1556677999999999997 8888 477889999999999999999653  45


Q ss_pred             CccchHHHHHHHHHHHHHHHHhccccCCCCccchHHHHHHHHHHHHHHhcCCcccchhcc-ccc-----cCccchHHHHH
Q 041507          147 SPVNIGELMFLTTLNATTRMLWGTSLRGKDRDIGDVQIRHVVREIIDLIGAPNISDLFPV-LAR-----FDVQGVESKAK  220 (481)
Q Consensus       147 ~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-l~~-----~~~~~~~~~~~  220 (481)
                      .++|+.+.++.++++++++++||.+.+...   ....+...................+|. +..     +....  ....
T Consensus       167 ~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~---l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~--~~~~  241 (480)
T PLN02648        167 GKAEFNDPLDQMAFNFLCKALTGKDPSETA---LGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPF--FLVK  241 (480)
T ss_pred             CCccccchHHHHHHHHHHHHHcCCCcchhh---hccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCch--hhhh
Confidence            579999999999999999999998765411   111122222221110000000000110 000     00000  0001


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcCccccCCccchhHHHHhhccCCCCHHHHHHHHHH-HHhhhccchHHHHHHHHHHHh
Q 041507          221 KHMLLFDKLFESSIGSRMKDELASGEEKKDGKVSKNFLQFLLKQSSLSIHQIKALFVD-VISGSTDTSSTTVEWAMAELL  299 (481)
Q Consensus       221 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~l~  299 (481)
                      +..+.+.+++.+.+.                    ++++...+ .+++++++.++++. +.+++++||+++++|++|+|+
T Consensus       242 ~~~~~~~~~~~~~~~--------------------~ll~~~~~-~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~  300 (480)
T PLN02648        242 SDYDKLYDFFRASAT--------------------EALDLAEK-FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVG  300 (480)
T ss_pred             ccHHHHHHHHHHHHH--------------------HHHHHHHh-cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            111112222221111                    22222222 35899999998875 446778888899999999999


Q ss_pred             hCcH-HHHHHHHHHHHHhcC-CccccccccCcchhHHHHHHhhccCCCCCccccccCCCCccccc----CeeeCCCCEEE
Q 041507          300 QHPE-IMRKACKELEQVVGN-DNIVEEVHTVKLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLS----GYSIPKGSIVY  373 (481)
Q Consensus       300 ~~p~-~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~----g~~ip~g~~v~  373 (481)
                      +||+ +|++|++|++.+++. +..++++++.+|||+++||+|++|++|+++. ..|.+.+|++++    ||.||||+.|.
T Consensus       301 ~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~-~~r~a~~d~~l~~~~~g~~IpkG~~V~  379 (480)
T PLN02648        301 RAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPF-QYGRAREDFVIESHDAAFEIKKGEMLF  379 (480)
T ss_pred             cCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccc-ccceecCCEEEecCCceEEECCCCEEE
Confidence            9995 999999999999863 4568999999999999999999999999998 467788999995    79999999999


Q ss_pred             EehhhhccCCCCCCCCCCCCCcccccCCCCCCCCCCCcceecc---------CCCCCCCCcHHHHHHHHHHHHHHHHHhc
Q 041507          374 VNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLPF---------GSGRRVCVGIPLAEKMVLHVLANLLHHF  444 (481)
Q Consensus       374 ~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A~~e~~~~l~~ll~~f  444 (481)
                      ++.+.+||||++|+||++|||+||++++..     ....+++|         |+|+|.|||++||++|++++++.|+++|
T Consensus       380 ~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~-----~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f  454 (480)
T PLN02648        380 GYQPLVTRDPKVFDRPEEFVPDRFMGEEGE-----KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRY  454 (480)
T ss_pred             EChHHHhCCcccCCCcceeCCCCCCCCCcc-----ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999864321     11233444         6778999999999999999999999999


Q ss_pred             c-eecCCC
Q 041507          445 K-WNLPEG  451 (481)
Q Consensus       445 ~-~~~~~~  451 (481)
                      + |++.++
T Consensus       455 ~~~~l~~~  462 (480)
T PLN02648        455 DSFEIEVD  462 (480)
T ss_pred             CEEeecCC
Confidence            8 998666


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.9e-54  Score=408.99  Aligned_cols=378  Identities=24%  Similarity=0.363  Sum_probs=301.1

Q ss_pred             HHHHHHHHHhhhCCeEEEecCCee--EEEecCHHHHHHHHhhCCccccCCCCCCccc--eecccCCceEEeCCCChhHHH
Q 041507           33 LHSYFAKLSQIYGPIFKLQLGRKV--CIVISSAPFAKQVLKGHDAIFSNRGDPPAAA--FQATYGAIDIAFSPNCPEWRT  108 (481)
Q Consensus        33 ~~~~~~~~~~kyG~v~~~~~~~~~--~vvv~d~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~w~~  108 (481)
                      +......+.+.||.++.++..+..  ++++++++++++++++.. .++.........  ..... +...++..+|+.|++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVL-GDGSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhc-cccceeecCCHHHHH
Confidence            455666788889999888876644  899999999999999874 111111101111  11222 333356667999999


Q ss_pred             HHHHHHHHhcccchhhHhHHHHHHHHHHHHHHHHhccCCccchHHHHHHHHHHHHHHHHhccccCCCCccchHHHHHHHH
Q 041507          109 LRKVFVREMMSNSGLDACYAIRQEEVKEMLKEVYGKIGSPVNIGELMFLTTLNATTRMLWGTSLRGKDRDIGDVQIRHVV  188 (481)
Q Consensus       109 ~R~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  188 (481)
                      +|+++. +.|+++.++.+.+.+.+.+.++++.+ ... ...++.+++..+++++|+ .+||.+.+..      ..+....
T Consensus       102 ~Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~------~~~~~~~  171 (411)
T COG2124         102 LRKLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLEDR------PQLLRWS  171 (411)
T ss_pred             HHHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHHH------HHHHHHH
Confidence            999997 99999999999999999999999999 434 788899999999999999 9999887522      2222222


Q ss_pred             HHHHHHhcCCcccchhccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCccccCCccchhHHHHhhc----c
Q 041507          189 REIIDLIGAPNISDLFPVLARFDVQGVESKAKKHMLLFDKLFESSIGSRMKDELASGEEKKDGKVSKNFLQFLLK----Q  264 (481)
Q Consensus       189 ~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~----~  264 (481)
                      ......        ..|...   ....+.+..++...+.+++.++|++++.+            ...|+++.++.    +
T Consensus       172 ~~~~~~--------~~~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~------------~~~dlls~l~~a~~~~  228 (411)
T COG2124         172 DALLLR--------LDPDLG---PEEPWRRARAARRELDAYLRALIAERRAA------------PRDDLLSLLLSAEDDG  228 (411)
T ss_pred             HHHHhc--------cCcccC---CcccHHHHHHHHHHHHHHHHHHHHHhccC------------CcccHHHHHHHHhhCC
Confidence            222221        001111   12335778888899999999999999843            36788888887    2


Q ss_pred             C-CCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHhcCCccccccccCcchhHHHHHHhhccC
Q 041507          265 S-SLSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVVGNDNIVEEVHTVKLHYLNAILKETLRL  343 (481)
Q Consensus       265 ~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl  343 (481)
                      + .+|++||.++++++++||+|||+++++|++|.|++||++++++++|.+.                ||++++|+|+||+
T Consensus       229 ~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~  292 (411)
T COG2124         229 GGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRL  292 (411)
T ss_pred             CCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHh
Confidence            3 4999999999999999999999999999999999999999999999864                7999999999999


Q ss_pred             CCCCccccccCCCCcccccCeeeCCCCEEEEehhhhccCCCCCCCCCCCCCcccccCCCCCCCCCCCcceeccCCCCCCC
Q 041507          344 HPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVNVWAIHRNPEAWKNPLEFQPDRFLKDGELGDFRGNNFNYLPFGSGRRVC  423 (481)
Q Consensus       344 ~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~Fg~G~r~C  423 (481)
                      +||++. ..|.+.+|++++|+.||+|+.|.++.+++||||++|++|++|||+||.            ..|+|||+|+|.|
T Consensus       293 ~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~FG~G~H~C  359 (411)
T COG2124         293 YPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLPFGGGPHRC  359 (411)
T ss_pred             CCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcCCCCCCccc
Confidence            999999 899999999999999999999999999999999999999999999986            4699999999999


Q ss_pred             CcHHHHHHHHHHHHHHHHHhcceecCCCCccCcccccccccccCCCeeEeeecc
Q 041507          424 VGIPLAEKMVLHVLANLLHHFKWNLPEGMKLDLSEKFGIVLKKSEPLMAIPTAR  477 (481)
Q Consensus       424 ~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  477 (481)
                      +|.+||++|++++++.||++|++....+ +..  .....+..+..+..+.++.|
T Consensus       360 lG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~~--~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         360 LGAALARLELKVALAELLRRFPLLLLAE-PPP--LVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             cCHHHHHHHHHHHHHHHHHhCchhhcCC-CCC--ccccccccCCCcceeeeecC
Confidence            9999999999999999999999987665 211  22344445555556655544


No 33 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=66.34  E-value=25  Score=25.72  Aligned_cols=61  Identities=25%  Similarity=0.340  Sum_probs=43.0

Q ss_pred             CCCCCCCCCCccccccCCCCCcHHHHHHHHHhhhCCeEEEecC------CeeEEEecCHHHHHHHHhhC
Q 041507           11 QPLPPGPRGLPFVGNLPFIEPDLHSYFAKLSQIYGPIFKLQLG------RKVCIVISSAPFAKQVLKGH   73 (481)
Q Consensus        11 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~------~~~~vvv~d~~~~~~i~~~~   73 (481)
                      .+.||--..+-++-|+..  .-..+-+.++.-+||.|..+++|      |.-+||..|-..++..+..-
T Consensus        11 ~rlppevnriLyirNLp~--~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dhl   77 (124)
T KOG0114|consen   11 IRLPPEVNRILYIRNLPF--KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDHL   77 (124)
T ss_pred             CCCChhhheeEEEecCCc--cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHHh
Confidence            344444444555555432  22356778888999999999987      67789999999999888753


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=63.20  E-value=5.4  Score=25.79  Aligned_cols=8  Identities=38%  Similarity=0.974  Sum_probs=6.4

Q ss_pred             CCcccccC
Q 041507          393 QPDRFLKD  400 (481)
Q Consensus       393 ~p~R~~~~  400 (481)
                      ||||||..
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78999964


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=57.96  E-value=2.5  Score=35.44  Aligned_cols=45  Identities=18%  Similarity=0.223  Sum_probs=33.1

Q ss_pred             cchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEe
Q 041507          329 KLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVN  375 (481)
Q Consensus       329 ~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~  375 (481)
                      .-..+.|||.|+.-...-.-. .. +..+|+.++|..||||+.|...
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~v-rl-RLle~i~i~g~~IPkgt~l~G~   95 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRV-RL-RLLEDIQIGGILIPKGTYLYGV   95 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEE-EE-EEcCceEECCEEeCCCCEEEEE
Confidence            345678899998776555443 12 3478899999999999988763


No 36 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=49.20  E-value=17  Score=23.32  Aligned_cols=23  Identities=22%  Similarity=0.391  Sum_probs=18.1

Q ss_pred             HHHHHhhCcHHHHHHHHHHHHHh
Q 041507          294 AMAELLQHPEIMRKACKELEQVV  316 (481)
Q Consensus       294 ~l~~l~~~p~~~~~lr~Ei~~~~  316 (481)
                      .+.+|.+||++.+++.+.=.+.+
T Consensus         5 iV~YLv~nPevl~kl~~g~asLI   27 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLI   27 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEe
Confidence            56789999999999987654444


No 37 
>PRK06789 flagellar motor switch protein; Validated
Probab=40.75  E-value=33  Score=23.53  Aligned_cols=39  Identities=23%  Similarity=0.296  Sum_probs=32.1

Q ss_pred             HHhhccCCCCCccccccCCCCccc--ccCeeeCCCCEEEEe
Q 041507          337 LKETLRLHPPLPLLLQHSPSTTCN--LSGYSIPKGSIVYVN  375 (481)
Q Consensus       337 i~E~lRl~~~~~~~~~r~~~~~~~--~~g~~ip~g~~v~~~  375 (481)
                      ++|-+.|.+-+...+-|.+.+++.  ++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            788999999988877777776554  589999999998875


No 38 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=37.51  E-value=15  Score=23.01  Aligned_cols=11  Identities=45%  Similarity=0.927  Sum_probs=9.2

Q ss_pred             eccCCCCCCCC
Q 041507          414 LPFGSGRRVCV  424 (481)
Q Consensus       414 ~~Fg~G~r~C~  424 (481)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999984


No 39 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=37.19  E-value=86  Score=24.26  Aligned_cols=41  Identities=7%  Similarity=0.167  Sum_probs=32.1

Q ss_pred             CcHHHHHHHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhC
Q 041507           31 PDLHSYFAKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGH   73 (481)
Q Consensus        31 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~   73 (481)
                      .+....+.+|.++||.+--..  +..++...|++.++++....
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhCh
Confidence            456778999999999874422  45678899999999998764


No 40 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=37.05  E-value=1e+02  Score=19.06  Aligned_cols=42  Identities=19%  Similarity=0.259  Sum_probs=29.1

Q ss_pred             HHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHH
Q 041507          271 QIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKEL  312 (481)
Q Consensus       271 ~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei  312 (481)
                      ++...+..++-.|-+..+-+++-.+...--||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            345566666666777777777766777777888877777765


No 41 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=34.77  E-value=39  Score=26.18  Aligned_cols=23  Identities=17%  Similarity=0.433  Sum_probs=16.9

Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHh
Q 041507          421 RVCVGIPLAEKMVLHVLANLLHH  443 (481)
Q Consensus       421 r~C~G~~~A~~e~~~~l~~ll~~  443 (481)
                      -.|.|+.||+..+-.|+..|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999864


No 42 
>PRK02302 hypothetical protein; Provisional
Probab=32.39  E-value=1e+02  Score=22.02  Aligned_cols=34  Identities=15%  Similarity=0.128  Sum_probs=26.8

Q ss_pred             HHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhh
Q 041507           39 KLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKG   72 (481)
Q Consensus        39 ~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~   72 (481)
                      +--++||+|..+.=-..-++...|-+.+.++..+
T Consensus        21 r~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         21 RKLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            3447899998877656677888999999999875


No 43 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=32.02  E-value=9.1  Score=36.09  Aligned_cols=45  Identities=18%  Similarity=0.219  Sum_probs=33.3

Q ss_pred             cchhHHHHHHhhccCCCCCccccccCCCCcccccCeeeCCCCEEEEe
Q 041507          329 KLHYLNAILKETLRLHPPLPLLLQHSPSTTCNLSGYSIPKGSIVYVN  375 (481)
Q Consensus       329 ~lp~l~a~i~E~lRl~~~~~~~~~r~~~~~~~~~g~~ip~g~~v~~~  375 (481)
                      .-..+.|||.|+.-+.-.... .. +..+|+.++|..||+||.|+..
T Consensus       254 ~~n~I~A~V~~~qtv~~G~~v-rl-RLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       254 ERNTIRACVHETQTVVDGSAV-KL-RLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCCceEEEEcCceEEecCCEE-EE-EEcCceeeCCEEecCCCEEEEE
Confidence            355788888888876655433 12 3478899999999999988765


No 44 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=31.05  E-value=56  Score=25.95  Aligned_cols=41  Identities=12%  Similarity=0.423  Sum_probs=28.0

Q ss_pred             CCCCcccccCeeeCCCCEEEEehh-------hhccCCCCCCCCCCCCCc
Q 041507          354 SPSTTCNLSGYSIPKGSIVYVNVW-------AIHRNPEAWKNPLEFQPD  395 (481)
Q Consensus       354 ~~~~~~~~~g~~ip~g~~v~~~~~-------~~~~d~~~~~~p~~F~p~  395 (481)
                      ...+|+.++|..||+|++-+....       -+|++...|.. ..+||+
T Consensus        51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~   98 (145)
T PF11138_consen   51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS   98 (145)
T ss_pred             EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence            346899999999999998766533       24566666654 444444


No 45 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=30.89  E-value=1e+02  Score=19.29  Aligned_cols=36  Identities=17%  Similarity=0.210  Sum_probs=25.7

Q ss_pred             HHHHHhhhCCeEEEecC----CeeEEEecCHHHHHHHHhh
Q 041507           37 FAKLSQIYGPIFKLQLG----RKVCIVISSAPFAKQVLKG   72 (481)
Q Consensus        37 ~~~~~~kyG~v~~~~~~----~~~~vvv~d~~~~~~i~~~   72 (481)
                      +.+...+||+|-.+.+.    +.-+|-..+.+.++.....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            35677899998877753    4456677899998888763


No 46 
>PRK02886 hypothetical protein; Provisional
Probab=29.05  E-value=1.3e+02  Score=21.41  Aligned_cols=34  Identities=9%  Similarity=0.185  Sum_probs=26.8

Q ss_pred             HHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhh
Q 041507           39 KLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKG   72 (481)
Q Consensus        39 ~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~   72 (481)
                      +--++||+|..+.=-..-+++..|-+.+.++..+
T Consensus        19 r~LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k   52 (87)
T PRK02886         19 KQLRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK   52 (87)
T ss_pred             HHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            3447899998877656677888999999999875


No 47 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=28.76  E-value=2.1e+02  Score=20.21  Aligned_cols=50  Identities=14%  Similarity=0.084  Sum_probs=41.5

Q ss_pred             CCHHHHHHHHHHHHhhhccchHHHHHHHHHHHhhCcHHHHHHHHHHHHHh
Q 041507          267 LSIHQIKALFVDVISGSTDTSSTTVEWAMAELLQHPEIMRKACKELEQVV  316 (481)
Q Consensus       267 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~l~~~p~~~~~lr~Ei~~~~  316 (481)
                      .............++-=+..++....-.+.+-++||+..+++.+.+..-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34555566677888899999999999999999999999999999887654


No 48 
>KOG3262 consensus H/ACA small nucleolar RNP component GAR1 [Translation, ribosomal structure and biogenesis]
Probab=25.80  E-value=38  Score=27.64  Aligned_cols=36  Identities=25%  Similarity=0.425  Sum_probs=25.9

Q ss_pred             eeeCCCCEEEEehhhhccCCCCCCCCCCCCC-cccccCC
Q 041507          364 YSIPKGSIVYVNVWAIHRNPEAWKNPLEFQP-DRFLKDG  401 (481)
Q Consensus       364 ~~ip~g~~v~~~~~~~~~d~~~~~~p~~F~p-~R~~~~~  401 (481)
                      ++|....-|..+.+.  -..++|-||+++-| +|||+..
T Consensus       106 fsIK~~dgv~assfk--~g~k~fi~p~KllPl~RFLP~p  142 (215)
T KOG3262|consen  106 FSIKPSDGVQASSFK--PGDKLFIDPDKLLPLDRFLPQP  142 (215)
T ss_pred             EEEecCCCceeeccc--CCCeEEecccccCcHhhcCCCC
Confidence            677777766666543  33477899999998 7999754


No 49 
>PF04798 Baculo_19:  Baculovirus 19 kDa protein conserved region;  InterPro: IPR006883 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf96; it is a family of uncharacterised viral proteins.
Probab=25.33  E-value=19  Score=28.23  Aligned_cols=21  Identities=29%  Similarity=0.428  Sum_probs=16.5

Q ss_pred             CCcceeccCCCCCCCCcHHHHH
Q 041507          409 NNFNYLPFGSGRRVCVGIPLAE  430 (481)
Q Consensus       409 ~~~~~~~Fg~G~r~C~G~~~A~  430 (481)
                      .-..|+- |++.|.||+.++|.
T Consensus        56 ~lYyYle-gss~~~CP~nE~av   76 (146)
T PF04798_consen   56 TLYYYLE-GSSSVFCPPNEFAV   76 (146)
T ss_pred             eEEEEEe-ccccccCCCCceEE
Confidence            3456788 99999999888773


No 50 
>PF09902 DUF2129:  Uncharacterized protein conserved in bacteria (DUF2129);  InterPro: IPR016979 This is a group of uncharacterised conserved proteins.
Probab=24.20  E-value=1.8e+02  Score=19.79  Aligned_cols=33  Identities=9%  Similarity=0.162  Sum_probs=25.4

Q ss_pred             HHhhhCCeEEEecCCeeEEEecCHHHHHHHHhh
Q 041507           40 LSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKG   72 (481)
Q Consensus        40 ~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~   72 (481)
                      --++||+|..+.=-..-+++..|-+.+.++..+
T Consensus        16 ~L~kfG~i~Y~Skk~kYvvlYvn~~~~e~~~~k   48 (71)
T PF09902_consen   16 QLRKFGDIHYVSKKMKYVVLYVNEEDVEEIIEK   48 (71)
T ss_pred             hHhhcccEEEEECCccEEEEEECHHHHHHHHHH
Confidence            446899988776555567778888999988865


No 51 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.17  E-value=2.7e+02  Score=19.81  Aligned_cols=36  Identities=11%  Similarity=0.186  Sum_probs=28.2

Q ss_pred             HHHHhhhCCeEEEecCCeeEEEecCHHHHHHHHhhC
Q 041507           38 AKLSQIYGPIFKLQLGRKVCIVISSAPFAKQVLKGH   73 (481)
Q Consensus        38 ~~~~~kyG~v~~~~~~~~~~vvv~d~~~~~~i~~~~   73 (481)
                      .+.-++||+|....=-..-++..++-+.+.+++.+=
T Consensus        19 aRqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~kl   54 (90)
T COG4471          19 ARQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEKL   54 (90)
T ss_pred             hHHHHhcCCEEEEecceeEEEEEECHHHHHHHHHHH
Confidence            445578999988776566777889999999998763


No 52 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=22.74  E-value=1.4e+02  Score=17.41  Aligned_cols=16  Identities=31%  Similarity=0.559  Sum_probs=10.9

Q ss_pred             HHHHh-hCcHHHHHHHH
Q 041507          295 MAELL-QHPEIMRKACK  310 (481)
Q Consensus       295 l~~l~-~~p~~~~~lr~  310 (481)
                      +..++ +||++++.++.
T Consensus        19 L~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   19 LQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHhChhHHHHHHh
Confidence            33444 89998887764


No 53 
>PF15080 DUF4547:  Domain of unknown function (DUF4547)
Probab=22.59  E-value=2.6e+02  Score=22.41  Aligned_cols=52  Identities=10%  Similarity=0.222  Sum_probs=38.7

Q ss_pred             cCCCCHHHHHHHHHHHHhhhccch----------HHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q 041507          264 QSSLSIHQIKALFVDVISGSTDTS----------STTVEWAMAELLQHPEIMRKACKELEQV  315 (481)
Q Consensus       264 ~~~l~~~~i~~~~~~~~~ag~~tt----------~~~l~~~l~~l~~~p~~~~~lr~Ei~~~  315 (481)
                      +-++.+.++.+.|.-|+.-|...-          ..-++.++-++..|+..|+.+..-+.-.
T Consensus       110 e~GLqE~dv~aLCtFfiahgnkaehy~a~~R~~yi~dv~~mItnmVkNqalq~~llrAvqvi  171 (196)
T PF15080_consen  110 ECGLQEGDVTALCTFFIAHGNKAEHYAAKVRQMYIRDVTFMITNMVKNQALQDGLLRAVQVI  171 (196)
T ss_pred             HcCCCcccHHHHHHHHHHhcchHhHhHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            457888888888887777676543          2236788999999999999888766543


No 54 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=22.56  E-value=98  Score=18.41  Aligned_cols=20  Identities=15%  Similarity=0.238  Sum_probs=15.5

Q ss_pred             HHHHHHHHhhCcHHHHHHHH
Q 041507          291 VEWAMAELLQHPEIMRKACK  310 (481)
Q Consensus       291 l~~~l~~l~~~p~~~~~lr~  310 (481)
                      -.|-+..++++||+|.-|.=
T Consensus        12 gl~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   12 GLFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             CHHHHHHHHcCHHHHHHHHH
Confidence            35677888999999987654


No 55 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=22.01  E-value=98  Score=24.93  Aligned_cols=40  Identities=15%  Similarity=0.199  Sum_probs=30.7

Q ss_pred             CCcHHHHHHHHHhhhC-CeEEEecCCe-e---EEEecCHHHHHHH
Q 041507           30 EPDLHSYFAKLSQIYG-PIFKLQLGRK-V---CIVISSAPFAKQV   69 (481)
Q Consensus        30 ~~~~~~~~~~~~~kyG-~v~~~~~~~~-~---~vvv~d~~~~~~i   69 (481)
                      ++...+..+++.+++| +|++++++|. +   -+|++||-.+-.+
T Consensus       153 GGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAGvl  197 (218)
T COG1707         153 GGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAGVL  197 (218)
T ss_pred             cchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhhhh
Confidence            5667889999999999 8999998763 2   3578888665544


No 56 
>PHA03162 hypothetical protein; Provisional
Probab=21.95  E-value=61  Score=24.81  Aligned_cols=24  Identities=17%  Similarity=0.256  Sum_probs=19.8

Q ss_pred             CCCCCCCCcHHHHHHHHHHHHHHH
Q 041507          417 GSGRRVCVGIPLAEKMVLHVLANL  440 (481)
Q Consensus       417 g~G~r~C~G~~~A~~e~~~~l~~l  440 (481)
                      ++|.+.|||+...+-|+-.=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999888887777665


Done!