Query 041509
Match_columns 211
No_of_seqs 217 out of 1709
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 13:13:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041509.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041509hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dr5_A Putative O-methyltransf 100.0 3.8E-29 1.3E-33 207.3 18.8 153 22-177 35-215 (221)
2 3r3h_A O-methyltransferase, SA 100.0 1.8E-28 6.3E-33 205.6 11.8 153 23-178 43-223 (242)
3 1sui_A Caffeoyl-COA O-methyltr 100.0 2.1E-27 7.1E-32 199.8 17.5 151 22-175 61-246 (247)
4 3c3y_A Pfomt, O-methyltransfer 99.9 4.2E-27 1.4E-31 196.4 16.9 150 23-175 53-236 (237)
5 3tr6_A O-methyltransferase; ce 99.9 3.9E-26 1.3E-30 187.1 16.3 152 22-176 46-225 (225)
6 3ntv_A MW1564 protein; rossman 99.9 1.7E-25 5.7E-30 185.6 17.1 149 23-175 54-231 (232)
7 3tfw_A Putative O-methyltransf 99.9 4.7E-25 1.6E-29 185.0 19.5 152 23-177 46-227 (248)
8 3duw_A OMT, O-methyltransferas 99.9 5E-25 1.7E-29 180.4 18.8 150 23-175 41-222 (223)
9 3cbg_A O-methyltransferase; cy 99.9 3.1E-25 1.1E-29 184.2 17.1 150 23-175 55-232 (232)
10 2avd_A Catechol-O-methyltransf 99.9 6.5E-25 2.2E-29 180.2 17.3 151 22-175 51-229 (229)
11 3u81_A Catechol O-methyltransf 99.9 1.6E-24 5.6E-29 177.9 18.3 154 22-178 40-216 (221)
12 3c3p_A Methyltransferase; NP_9 99.9 2.8E-24 9.6E-29 174.8 17.9 150 22-175 38-209 (210)
13 2hnk_A SAM-dependent O-methylt 99.9 3E-23 1E-27 172.2 16.5 152 23-177 43-233 (239)
14 2gpy_A O-methyltransferase; st 99.9 1.8E-22 6.1E-27 166.6 16.8 152 22-177 36-216 (233)
15 3cvo_A Methyltransferase-like 99.9 1E-21 3.5E-26 161.2 11.0 121 22-153 14-161 (202)
16 2wk1_A NOVP; transferase, O-me 99.8 1.3E-18 4.6E-23 149.3 9.7 150 23-174 85-280 (282)
17 2bm8_A Cephalosporin hydroxyla 99.7 1.3E-17 4.5E-22 139.0 9.5 115 24-144 64-186 (236)
18 3p9n_A Possible methyltransfer 99.7 1.8E-15 6.2E-20 120.6 16.2 104 39-147 43-155 (189)
19 3e05_A Precorrin-6Y C5,15-meth 99.7 1.1E-15 3.8E-20 123.2 14.7 117 24-145 24-142 (204)
20 3fpf_A Mtnas, putative unchara 99.7 7.5E-16 2.5E-20 133.0 14.5 104 34-145 116-222 (298)
21 3njr_A Precorrin-6Y methylase; 99.7 2.8E-15 9.7E-20 121.9 15.2 114 24-145 39-154 (204)
22 3hm2_A Precorrin-6Y C5,15-meth 99.6 2.6E-15 9E-20 117.5 13.2 114 28-146 13-128 (178)
23 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.3E-15 4.5E-20 128.9 12.0 116 30-149 58-182 (261)
24 2esr_A Methyltransferase; stru 99.6 1.7E-15 5.8E-20 119.1 11.0 112 31-146 22-139 (177)
25 3mb5_A SAM-dependent methyltra 99.6 2.8E-15 9.5E-20 124.6 11.9 129 11-145 64-194 (255)
26 2ift_A Putative methylase HI07 99.6 3.1E-15 1.1E-19 121.2 11.5 105 40-148 53-166 (201)
27 3orh_A Guanidinoacetate N-meth 99.6 1.4E-15 4.7E-20 126.4 8.9 102 39-144 59-169 (236)
28 2fpo_A Methylase YHHF; structu 99.6 4.4E-15 1.5E-19 120.4 11.6 103 40-147 54-162 (202)
29 2b2c_A Spermidine synthase; be 99.6 1.9E-15 6.4E-20 131.4 9.7 134 38-175 106-269 (314)
30 3mti_A RRNA methylase; SAM-dep 99.6 4.2E-15 1.5E-19 117.6 10.6 102 39-146 21-136 (185)
31 2fhp_A Methylase, putative; al 99.6 7E-15 2.4E-19 115.9 11.5 104 39-146 43-155 (187)
32 1nkv_A Hypothetical protein YJ 99.6 6E-15 2E-19 122.2 11.4 119 22-146 18-141 (256)
33 1xdz_A Methyltransferase GIDB; 99.6 1.6E-14 5.4E-19 119.7 13.4 103 39-146 69-175 (240)
34 3eey_A Putative rRNA methylase 99.6 3.9E-15 1.3E-19 119.0 9.4 106 38-145 20-139 (197)
35 1l3i_A Precorrin-6Y methyltran 99.6 3.2E-14 1.1E-18 111.8 13.9 117 23-145 16-134 (192)
36 3f4k_A Putative methyltransfer 99.6 1.4E-14 4.8E-19 120.0 11.3 112 30-146 36-151 (257)
37 3lbf_A Protein-L-isoaspartate 99.6 1.4E-14 4.9E-19 116.8 10.9 115 24-147 61-176 (210)
38 3jwh_A HEN1; methyltransferase 99.6 4.2E-14 1.4E-18 114.7 13.6 119 25-147 14-143 (217)
39 3lpm_A Putative methyltransfer 99.6 1.2E-14 4E-19 121.9 10.2 113 29-145 37-176 (259)
40 2b25_A Hypothetical protein; s 99.6 1.8E-14 6E-19 125.2 11.6 132 10-145 75-219 (336)
41 1o54_A SAM-dependent O-methylt 99.6 1.2E-14 4.2E-19 122.8 10.1 132 9-146 81-214 (277)
42 3gjy_A Spermidine synthase; AP 99.6 2.9E-14 9.9E-19 124.1 12.7 101 40-143 87-198 (317)
43 3evz_A Methyltransferase; NYSG 99.6 3.1E-14 1.1E-18 116.3 12.0 115 24-144 39-178 (230)
44 2o07_A Spermidine synthase; st 99.5 1.1E-14 3.8E-19 125.8 8.5 134 38-175 93-256 (304)
45 1zx0_A Guanidinoacetate N-meth 99.5 2.1E-14 7.3E-19 118.3 9.9 103 39-145 59-170 (236)
46 3a27_A TYW2, uncharacterized p 99.5 1.8E-14 6.3E-19 122.2 9.7 118 25-148 104-222 (272)
47 3ajd_A Putative methyltransfer 99.5 4.7E-14 1.6E-18 119.6 12.2 126 24-151 67-217 (274)
48 1ws6_A Methyltransferase; stru 99.5 4E-14 1.4E-18 109.8 10.7 102 40-148 41-150 (171)
49 3kkz_A Uncharacterized protein 99.5 2.8E-14 9.5E-19 119.4 10.4 104 38-146 44-151 (267)
50 2pwy_A TRNA (adenine-N(1)-)-me 99.5 5.3E-14 1.8E-18 116.5 11.8 131 10-146 66-199 (258)
51 1yzh_A TRNA (guanine-N(7)-)-me 99.5 9.6E-14 3.3E-18 112.8 13.0 104 39-146 40-157 (214)
52 2yxd_A Probable cobalt-precorr 99.5 3.8E-13 1.3E-17 105.0 15.8 112 24-145 19-131 (183)
53 3dxy_A TRNA (guanine-N(7)-)-me 99.5 3.3E-14 1.1E-18 117.1 10.2 104 40-146 34-151 (218)
54 1uir_A Polyamine aminopropyltr 99.5 3.6E-14 1.2E-18 123.0 10.9 104 38-144 75-194 (314)
55 3g89_A Ribosomal RNA small sub 99.5 4.5E-14 1.5E-18 118.5 11.2 102 40-146 80-185 (249)
56 3hem_A Cyclopropane-fatty-acyl 99.5 1E-13 3.5E-18 118.2 13.5 101 38-146 70-184 (302)
57 2igt_A SAM dependent methyltra 99.5 1E-13 3.5E-18 121.2 13.5 110 31-145 143-272 (332)
58 1iy9_A Spermidine synthase; ro 99.5 4E-14 1.4E-18 120.5 10.6 102 39-143 74-187 (275)
59 3jwg_A HEN1, methyltransferase 99.5 8.1E-14 2.8E-18 113.0 12.0 118 26-147 15-143 (219)
60 2yvl_A TRMI protein, hypotheti 99.5 9.7E-14 3.3E-18 114.3 12.4 130 9-146 59-191 (248)
61 1mjf_A Spermidine synthase; sp 99.5 6.1E-14 2.1E-18 119.6 11.2 103 37-144 72-192 (281)
62 3kr9_A SAM-dependent methyltra 99.5 8.6E-14 2.9E-18 115.7 11.7 111 32-146 6-120 (225)
63 2ozv_A Hypothetical protein AT 99.5 4.2E-14 1.4E-18 119.1 9.7 116 28-146 24-171 (260)
64 2pbf_A Protein-L-isoaspartate 99.5 4.7E-14 1.6E-18 115.2 9.6 117 24-145 62-193 (227)
65 1i9g_A Hypothetical protein RV 99.5 5.4E-14 1.9E-18 118.3 10.3 130 11-145 70-203 (280)
66 1ixk_A Methyltransferase; open 99.5 6.8E-14 2.3E-18 121.2 11.1 124 23-150 101-251 (315)
67 2b78_A Hypothetical protein SM 99.5 7.8E-14 2.7E-18 124.1 11.8 106 39-148 211-334 (385)
68 1xj5_A Spermidine synthase 1; 99.5 4E-14 1.4E-18 124.0 9.7 109 38-149 118-239 (334)
69 4df3_A Fibrillarin-like rRNA/T 99.5 8.8E-14 3E-18 116.2 11.3 106 38-146 75-183 (233)
70 1dus_A MJ0882; hypothetical pr 99.5 6.7E-14 2.3E-18 110.2 10.0 112 28-146 40-158 (194)
71 1yb2_A Hypothetical protein TA 99.5 2.8E-14 9.6E-19 120.7 8.3 130 12-147 82-213 (275)
72 1g8a_A Fibrillarin-like PRE-rR 99.5 1.1E-13 3.8E-18 113.1 11.4 104 38-144 71-177 (227)
73 3c0k_A UPF0064 protein YCCW; P 99.5 1.1E-13 3.8E-18 123.2 12.2 107 39-149 219-343 (396)
74 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.9E-13 6.6E-18 111.6 12.7 104 39-145 37-153 (213)
75 3dlc_A Putative S-adenosyl-L-m 99.5 1.3E-13 4.4E-18 110.7 11.4 115 26-146 30-149 (219)
76 1inl_A Spermidine synthase; be 99.5 7E-14 2.4E-18 120.2 9.8 104 38-144 88-204 (296)
77 3m4x_A NOL1/NOP2/SUN family pr 99.5 7.7E-14 2.6E-18 126.9 10.6 128 20-150 85-239 (456)
78 2yxe_A Protein-L-isoaspartate 99.5 1.4E-13 4.6E-18 111.4 11.0 116 24-146 61-178 (215)
79 3adn_A Spermidine synthase; am 99.5 2.1E-14 7.1E-19 123.7 6.2 104 38-144 81-197 (294)
80 4htf_A S-adenosylmethionine-de 99.5 2.3E-13 7.9E-18 114.8 12.4 101 40-145 68-173 (285)
81 3m6w_A RRNA methylase; rRNA me 99.5 1E-13 3.5E-18 126.4 10.8 125 22-150 83-234 (464)
82 1dl5_A Protein-L-isoaspartate 99.5 1.4E-13 4.7E-18 118.9 11.1 118 22-146 57-176 (317)
83 2frn_A Hypothetical protein PH 99.5 5.6E-14 1.9E-18 119.5 8.5 102 39-147 124-227 (278)
84 2gb4_A Thiopurine S-methyltran 99.5 2.3E-13 8E-18 114.4 11.9 117 23-144 51-190 (252)
85 3bus_A REBM, methyltransferase 99.5 2.6E-13 9.1E-18 113.4 12.2 105 37-146 58-167 (273)
86 2pt6_A Spermidine synthase; tr 99.5 1.3E-13 4.5E-18 119.9 10.6 104 38-144 114-229 (321)
87 4dzr_A Protein-(glutamine-N5) 99.5 6.7E-14 2.3E-18 112.1 8.0 118 25-145 11-164 (215)
88 2as0_A Hypothetical protein PH 99.5 1.7E-13 5.8E-18 121.9 11.4 105 40-148 217-338 (396)
89 3v97_A Ribosomal RNA large sub 99.5 2.4E-13 8.3E-18 129.5 13.2 107 37-147 536-659 (703)
90 1fbn_A MJ fibrillarin homologu 99.5 1.6E-13 5.4E-18 112.9 10.2 101 39-144 73-177 (230)
91 3gu3_A Methyltransferase; alph 99.5 1E-13 3.5E-18 117.5 9.2 108 35-146 17-127 (284)
92 1wxx_A TT1595, hypothetical pr 99.5 1.5E-13 5.2E-18 121.8 10.7 105 40-149 209-329 (382)
93 2i7c_A Spermidine synthase; tr 99.5 1.3E-13 4.5E-18 117.7 9.6 104 38-144 76-191 (283)
94 1i1n_A Protein-L-isoaspartate 99.5 1.9E-13 6.5E-18 111.5 10.1 117 24-146 59-183 (226)
95 4dmg_A Putative uncharacterize 99.5 2.9E-13 9.8E-18 121.0 12.1 103 40-149 214-330 (393)
96 1pjz_A Thiopurine S-methyltran 99.5 1.6E-13 5.4E-18 111.2 9.4 114 24-143 7-138 (203)
97 3ofk_A Nodulation protein S; N 99.5 1.5E-13 5E-18 111.1 9.2 109 29-145 40-154 (216)
98 3lec_A NADB-rossmann superfami 99.5 3.4E-13 1.2E-17 112.5 11.6 111 32-146 12-126 (230)
99 3dtn_A Putative methyltransfer 99.5 1.7E-13 5.9E-18 112.0 9.6 106 38-149 42-152 (234)
100 1jg1_A PIMT;, protein-L-isoasp 99.5 2.6E-13 8.8E-18 111.8 10.6 115 24-146 75-190 (235)
101 2p7i_A Hypothetical protein; p 99.5 2.6E-13 8.9E-18 110.8 10.6 107 29-145 31-141 (250)
102 2o57_A Putative sarcosine dime 99.5 3.9E-13 1.3E-17 113.9 11.9 105 37-146 79-188 (297)
103 1vbf_A 231AA long hypothetical 99.5 4.1E-13 1.4E-17 109.7 11.5 114 23-146 53-166 (231)
104 3grz_A L11 mtase, ribosomal pr 99.5 1.6E-13 5.5E-18 110.3 8.8 107 31-145 50-159 (205)
105 3ocj_A Putative exported prote 99.5 5.2E-14 1.8E-18 120.4 6.2 104 38-145 116-227 (305)
106 1vl5_A Unknown conserved prote 99.5 3.1E-13 1.1E-17 112.4 10.8 109 32-146 29-141 (260)
107 3tma_A Methyltransferase; thum 99.5 1.2E-12 4.1E-17 114.6 15.0 119 23-145 186-317 (354)
108 2ex4_A Adrenal gland protein A 99.5 1.5E-13 5.1E-18 113.3 8.6 117 28-149 63-189 (241)
109 3vc1_A Geranyl diphosphate 2-C 99.5 2.5E-13 8.7E-18 116.5 10.3 104 38-146 115-222 (312)
110 1kpg_A CFA synthase;, cyclopro 99.5 9.3E-13 3.2E-17 111.1 13.4 101 38-146 62-169 (287)
111 2xvm_A Tellurite resistance pr 99.5 5.5E-13 1.9E-17 105.8 11.3 107 32-146 24-137 (199)
112 2b3t_A Protein methyltransfera 99.4 5.6E-13 1.9E-17 112.6 12.0 115 25-145 92-238 (276)
113 1jsx_A Glucose-inhibited divis 99.4 4.7E-13 1.6E-17 107.4 11.0 101 40-146 65-166 (207)
114 3dh0_A SAM dependent methyltra 99.4 2.6E-13 8.9E-18 109.7 9.5 109 34-146 31-144 (219)
115 2frx_A Hypothetical protein YE 99.4 5E-13 1.7E-17 122.2 12.5 127 21-150 96-251 (479)
116 1xxl_A YCGJ protein; structura 99.4 4.8E-13 1.6E-17 110.4 11.1 115 28-148 9-127 (239)
117 3mgg_A Methyltransferase; NYSG 99.4 3.2E-13 1.1E-17 113.2 10.1 112 30-145 27-142 (276)
118 2fk8_A Methoxy mycolic acid sy 99.4 9.6E-13 3.3E-17 112.8 13.0 101 38-146 88-195 (318)
119 4dcm_A Ribosomal RNA large sub 99.4 3.4E-13 1.2E-17 119.7 10.4 115 30-149 212-338 (375)
120 1nt2_A Fibrillarin-like PRE-rR 99.4 3.4E-13 1.2E-17 110.2 9.5 101 39-144 56-160 (210)
121 3g5t_A Trans-aconitate 3-methy 99.4 9.5E-13 3.3E-17 112.0 12.6 116 24-143 21-147 (299)
122 3id6_C Fibrillarin-like rRNA/T 99.4 5.9E-13 2E-17 111.1 11.0 104 38-144 74-180 (232)
123 3gnl_A Uncharacterized protein 99.4 7.1E-13 2.4E-17 111.4 11.5 111 32-146 12-126 (244)
124 3m70_A Tellurite resistance pr 99.4 1E-12 3.5E-17 110.9 12.3 109 30-146 111-224 (286)
125 1u2z_A Histone-lysine N-methyl 99.4 1E-12 3.5E-17 118.8 13.0 119 26-147 228-361 (433)
126 3ujc_A Phosphoethanolamine N-m 99.4 3.6E-13 1.2E-17 111.5 8.9 118 23-146 35-160 (266)
127 3ckk_A TRNA (guanine-N(7)-)-me 99.4 4.6E-13 1.6E-17 111.4 9.5 105 39-146 45-169 (235)
128 1nv8_A HEMK protein; class I a 99.4 2.8E-12 9.7E-17 109.5 14.2 114 24-144 104-248 (284)
129 2vdv_E TRNA (guanine-N(7)-)-me 99.4 7.5E-13 2.6E-17 110.0 10.3 103 40-145 49-173 (246)
130 3gdh_A Trimethylguanosine synt 99.4 4.2E-13 1.4E-17 110.4 8.6 106 31-143 69-179 (241)
131 2ipx_A RRNA 2'-O-methyltransfe 99.4 9.1E-13 3.1E-17 108.3 10.5 105 38-145 75-182 (233)
132 3bwc_A Spermidine synthase; SA 99.4 6.7E-13 2.3E-17 114.4 10.1 104 39-145 94-210 (304)
133 1r18_A Protein-L-isoaspartate( 99.4 3.8E-13 1.3E-17 110.2 7.8 116 25-145 67-194 (227)
134 3g07_A 7SK snRNA methylphospha 99.4 5.8E-13 2E-17 113.7 8.5 103 39-144 45-219 (292)
135 3hnr_A Probable methyltransfer 99.4 9.8E-13 3.4E-17 106.4 9.4 112 26-148 32-148 (220)
136 2yxl_A PH0851 protein, 450AA l 99.4 1.5E-12 5.1E-17 118.0 11.6 126 23-150 242-394 (450)
137 3dmg_A Probable ribosomal RNA 99.4 7.5E-13 2.6E-17 117.8 9.4 120 24-149 212-344 (381)
138 2qfm_A Spermine synthase; sper 99.4 1.5E-12 5.3E-17 115.0 11.2 103 40-146 188-315 (364)
139 2h00_A Methyltransferase 10 do 99.4 8.6E-13 2.9E-17 109.7 9.1 91 26-119 46-148 (254)
140 2nxc_A L11 mtase, ribosomal pr 99.4 2.1E-12 7.3E-17 108.2 11.6 99 39-145 119-218 (254)
141 3e23_A Uncharacterized protein 99.4 8.1E-13 2.8E-17 106.5 8.7 153 31-197 33-206 (211)
142 2cmg_A Spermidine synthase; tr 99.4 2.7E-13 9.1E-18 114.9 6.0 95 39-144 71-170 (262)
143 3lcc_A Putative methyl chlorid 99.4 5.6E-13 1.9E-17 109.3 7.8 100 40-146 66-172 (235)
144 3k6r_A Putative transferase PH 99.4 6.6E-13 2.2E-17 113.6 8.4 102 38-146 123-226 (278)
145 2qy6_A UPF0209 protein YFCK; s 99.4 5.8E-13 2E-17 112.7 7.9 104 38-142 58-210 (257)
146 3axs_A Probable N(2),N(2)-dime 99.4 7.8E-13 2.7E-17 118.2 9.1 104 39-145 51-158 (392)
147 3h2b_A SAM-dependent methyltra 99.4 1.7E-12 5.9E-17 103.8 10.2 110 25-145 27-141 (203)
148 3ou2_A SAM-dependent methyltra 99.4 2.4E-12 8.1E-17 103.5 11.0 111 28-148 34-149 (218)
149 2dul_A N(2),N(2)-dimethylguano 99.4 1.9E-12 6.6E-17 115.1 11.3 101 40-144 47-163 (378)
150 2kw5_A SLR1183 protein; struct 99.4 2.5E-12 8.6E-17 102.8 10.8 109 32-146 21-132 (202)
151 3bkw_A MLL3908 protein, S-aden 99.4 1.7E-12 5.9E-17 106.1 10.0 109 30-145 33-144 (243)
152 2yqz_A Hypothetical protein TT 99.4 1.9E-12 6.4E-17 107.1 10.2 101 38-144 37-140 (263)
153 1xtp_A LMAJ004091AAA; SGPP, st 99.4 2.2E-12 7.4E-17 106.4 10.5 106 38-149 91-201 (254)
154 4fsd_A Arsenic methyltransfera 99.4 1.9E-12 6.7E-17 114.5 10.6 106 38-145 81-203 (383)
155 3uwp_A Histone-lysine N-methyl 99.4 4.9E-12 1.7E-16 113.6 13.3 112 35-149 168-292 (438)
156 3g5l_A Putative S-adenosylmeth 99.4 2E-12 6.9E-17 106.9 9.7 102 37-145 41-145 (253)
157 3dli_A Methyltransferase; PSI- 99.4 1.8E-12 6.1E-17 106.7 9.2 96 38-145 39-140 (240)
158 4hg2_A Methyltransferase type 99.4 7.8E-13 2.7E-17 111.7 7.0 111 25-148 26-138 (257)
159 3thr_A Glycine N-methyltransfe 99.4 4.6E-12 1.6E-16 106.9 11.8 118 23-145 40-175 (293)
160 3m33_A Uncharacterized protein 99.4 3.8E-13 1.3E-17 110.2 4.8 105 26-142 32-139 (226)
161 2yx1_A Hypothetical protein MJ 99.4 2.3E-12 7.7E-17 112.6 9.8 99 39-148 194-294 (336)
162 2p35_A Trans-aconitate 2-methy 99.4 1.9E-12 6.5E-17 107.0 8.8 100 37-145 30-132 (259)
163 1wzn_A SAM-dependent methyltra 99.3 4E-12 1.4E-16 104.9 10.5 108 29-143 27-143 (252)
164 3l8d_A Methyltransferase; stru 99.3 2.9E-12 1E-16 104.8 9.6 99 39-145 52-153 (242)
165 1o9g_A RRNA methyltransferase; 99.3 1.5E-12 5E-17 108.3 7.9 118 30-148 38-217 (250)
166 3bkx_A SAM-dependent methyltra 99.3 8.3E-12 2.8E-16 104.3 12.5 111 36-148 39-162 (275)
167 3sm3_A SAM-dependent methyltra 99.3 2.6E-12 8.9E-17 104.2 9.0 102 39-146 29-142 (235)
168 3dp7_A SAM-dependent methyltra 99.3 7.4E-12 2.5E-16 110.0 12.5 107 39-150 178-292 (363)
169 3iv6_A Putative Zn-dependent a 99.3 2.8E-12 9.6E-17 108.8 9.4 112 26-145 31-148 (261)
170 3e8s_A Putative SAM dependent 99.3 4.9E-12 1.7E-16 101.9 10.4 103 34-146 46-153 (227)
171 1ri5_A MRNA capping enzyme; me 99.3 4.9E-12 1.7E-16 106.4 10.8 103 39-145 63-174 (298)
172 2jjq_A Uncharacterized RNA met 99.3 6.3E-12 2.2E-16 113.3 11.8 110 26-146 275-388 (425)
173 2p8j_A S-adenosylmethionine-de 99.3 1.6E-12 5.3E-17 104.2 7.0 115 27-146 10-129 (209)
174 2qm3_A Predicted methyltransfe 99.3 5.1E-12 1.8E-16 111.6 10.9 97 40-141 172-273 (373)
175 3ege_A Putative methyltransfer 99.3 3.1E-12 1.1E-16 106.9 9.0 111 24-146 18-131 (261)
176 1ve3_A Hypothetical protein PH 99.3 3E-12 1E-16 103.6 8.6 100 40-145 38-142 (227)
177 1y8c_A S-adenosylmethionine-de 99.3 2.3E-12 7.7E-17 105.3 7.7 111 26-143 21-140 (246)
178 3tm4_A TRNA (guanine N2-)-meth 99.3 5.3E-12 1.8E-16 111.7 10.4 117 23-145 201-330 (373)
179 3g2m_A PCZA361.24; SAM-depende 99.3 3E-12 1E-16 108.9 8.5 99 40-145 82-190 (299)
180 1sqg_A SUN protein, FMU protei 99.3 6.2E-12 2.1E-16 113.1 11.0 125 23-150 229-379 (429)
181 3bt7_A TRNA (uracil-5-)-methyl 99.3 7.2E-12 2.5E-16 110.6 11.0 96 41-145 214-326 (369)
182 3ggd_A SAM-dependent methyltra 99.3 7.2E-12 2.4E-16 103.1 10.3 113 29-148 44-166 (245)
183 3ccf_A Cyclopropane-fatty-acyl 99.3 3E-12 1E-16 107.7 8.1 103 32-145 49-154 (279)
184 3q7e_A Protein arginine N-meth 99.3 3.6E-12 1.2E-16 111.7 8.8 100 37-142 63-170 (349)
185 2fyt_A Protein arginine N-meth 99.3 6.1E-12 2.1E-16 110.0 10.1 105 32-142 56-168 (340)
186 3mq2_A 16S rRNA methyltransfer 99.3 3.6E-12 1.2E-16 103.3 7.9 105 37-146 24-141 (218)
187 3i9f_A Putative type 11 methyl 99.3 3.1E-12 1E-16 99.6 7.1 97 37-146 14-113 (170)
188 3pfg_A N-methyltransferase; N, 99.3 5.3E-12 1.8E-16 105.1 9.1 93 40-143 50-149 (263)
189 3gwz_A MMCR; methyltransferase 99.3 2E-11 7E-16 107.4 13.2 105 39-150 201-312 (369)
190 3r0q_C Probable protein argini 99.3 6.8E-12 2.3E-16 111.1 9.9 101 36-143 59-167 (376)
191 1uwv_A 23S rRNA (uracil-5-)-me 99.3 1.2E-11 4.1E-16 111.5 11.6 104 37-146 283-390 (433)
192 3q87_B N6 adenine specific DNA 99.3 8E-12 2.7E-16 98.4 9.0 105 26-148 8-126 (170)
193 2b9e_A NOL1/NOP2/SUN domain fa 99.3 1.9E-11 6.4E-16 106.0 12.1 126 22-150 84-239 (309)
194 2pjd_A Ribosomal RNA small sub 99.3 4.4E-12 1.5E-16 110.7 8.0 115 29-149 185-307 (343)
195 3bzb_A Uncharacterized protein 99.3 2.1E-11 7E-16 103.6 11.9 104 39-146 78-206 (281)
196 3i53_A O-methyltransferase; CO 99.3 1.1E-11 3.6E-16 107.2 10.2 103 40-149 169-278 (332)
197 3mcz_A O-methyltransferase; ad 99.3 1.4E-11 4.7E-16 107.1 10.9 105 41-149 180-291 (352)
198 1g6q_1 HnRNP arginine N-methyl 99.3 1.1E-11 3.9E-16 107.6 10.1 105 32-142 30-142 (328)
199 3p2e_A 16S rRNA methylase; met 99.3 4.2E-12 1.4E-16 104.9 6.8 112 28-144 14-138 (225)
200 2y1w_A Histone-arginine methyl 99.3 1.3E-11 4.6E-16 108.0 10.4 101 36-143 46-153 (348)
201 4hc4_A Protein arginine N-meth 99.3 7.6E-12 2.6E-16 111.2 8.6 98 38-142 81-186 (376)
202 2pxx_A Uncharacterized protein 99.3 4E-12 1.4E-16 101.8 6.2 101 39-145 41-159 (215)
203 1ne2_A Hypothetical protein TA 99.3 6.6E-11 2.3E-15 94.6 13.1 124 8-146 8-147 (200)
204 3d2l_A SAM-dependent methyltra 99.3 8.1E-12 2.8E-16 102.1 7.7 96 40-143 33-135 (243)
205 3cgg_A SAM-dependent methyltra 99.3 2.4E-11 8.3E-16 95.4 10.2 105 29-145 37-147 (195)
206 3sso_A Methyltransferase; macr 99.3 1.1E-11 3.6E-16 111.1 8.9 98 40-148 216-326 (419)
207 1wy7_A Hypothetical protein PH 99.3 1.7E-10 5.9E-15 92.4 15.3 110 23-145 29-148 (207)
208 2r3s_A Uncharacterized protein 99.2 3E-11 1E-15 104.0 10.6 105 39-149 164-275 (335)
209 1x19_A CRTF-related protein; m 99.2 1.2E-10 4.1E-15 101.7 14.5 104 38-148 188-298 (359)
210 1qzz_A RDMB, aclacinomycin-10- 99.2 2E-11 6.8E-16 106.8 9.5 102 38-146 180-288 (374)
211 2gs9_A Hypothetical protein TT 99.2 1E-11 3.4E-16 99.9 6.9 94 40-145 36-132 (211)
212 2i62_A Nicotinamide N-methyltr 99.2 8E-12 2.7E-16 103.4 6.4 103 39-145 55-198 (265)
213 2ip2_A Probable phenazine-spec 99.2 4.3E-11 1.5E-15 103.3 10.8 101 42-149 169-276 (334)
214 1ej0_A FTSJ; methyltransferase 99.2 1.9E-11 6.5E-16 94.2 7.7 103 31-145 13-136 (180)
215 2qe6_A Uncharacterized protein 99.2 2E-10 6.7E-15 97.5 14.7 105 39-147 76-198 (274)
216 1tw3_A COMT, carminomycin 4-O- 99.2 3.3E-11 1.1E-15 105.0 10.1 103 38-147 181-290 (360)
217 3bxo_A N,N-dimethyltransferase 99.2 3.2E-11 1.1E-15 98.3 9.3 95 39-144 39-140 (239)
218 2avn_A Ubiquinone/menaquinone 99.2 4.2E-11 1.4E-15 99.8 8.9 95 40-145 54-152 (260)
219 3bgv_A MRNA CAP guanine-N7 met 99.2 1.1E-10 3.7E-15 100.0 11.6 102 40-145 34-155 (313)
220 3b3j_A Histone-arginine methyl 99.2 3.6E-11 1.2E-15 109.9 8.8 99 38-143 156-261 (480)
221 3fzg_A 16S rRNA methylase; met 99.2 6.7E-11 2.3E-15 96.1 9.0 113 26-145 34-152 (200)
222 1zq9_A Probable dimethyladenos 99.2 1.5E-10 5.2E-15 98.7 11.7 96 19-122 6-104 (285)
223 2aot_A HMT, histamine N-methyl 99.2 6.9E-11 2.3E-15 100.4 9.5 106 39-145 51-172 (292)
224 3htx_A HEN1; HEN1, small RNA m 99.2 1.6E-10 5.4E-15 111.2 12.7 112 30-145 711-834 (950)
225 2g72_A Phenylethanolamine N-me 99.2 5.8E-11 2E-15 100.4 8.2 102 40-145 71-215 (289)
226 2vdw_A Vaccinia virus capping 99.2 1.6E-10 5.6E-15 99.4 10.6 102 40-145 48-169 (302)
227 2r6z_A UPF0341 protein in RSP 99.2 3.1E-11 1.1E-15 102.0 5.9 87 29-120 72-170 (258)
228 2a14_A Indolethylamine N-methy 99.2 3.9E-11 1.3E-15 100.6 6.5 103 39-145 54-197 (263)
229 1p91_A Ribosomal RNA large sub 99.2 1E-10 3.5E-15 97.6 9.0 96 39-146 84-179 (269)
230 3o4f_A Spermidine synthase; am 99.1 1.3E-10 4.4E-15 100.1 9.0 105 36-143 79-196 (294)
231 3gru_A Dimethyladenosine trans 99.1 3.7E-10 1.3E-14 97.2 11.9 95 20-121 29-124 (295)
232 3hp7_A Hemolysin, putative; st 99.1 1.4E-10 4.7E-15 99.8 8.3 97 40-144 85-184 (291)
233 2f8l_A Hypothetical protein LM 99.1 2.3E-10 7.7E-15 99.8 9.3 118 23-145 109-256 (344)
234 2h1r_A Dimethyladenosine trans 99.1 2.5E-10 8.5E-15 98.1 9.4 95 20-122 21-117 (299)
235 3cc8_A Putative methyltransfer 99.1 1.8E-10 6.1E-15 92.9 8.0 96 39-145 31-130 (230)
236 3lst_A CALO1 methyltransferase 99.1 2.8E-10 9.6E-15 99.1 9.6 102 39-150 183-291 (348)
237 1vlm_A SAM-dependent methyltra 99.1 1.7E-10 5.8E-15 93.6 7.0 99 31-145 38-139 (219)
238 2plw_A Ribosomal RNA methyltra 99.1 4.7E-10 1.6E-14 89.3 9.4 94 39-143 21-152 (201)
239 3tqs_A Ribosomal RNA small sub 99.1 5.8E-10 2E-14 94.1 10.0 95 19-120 7-105 (255)
240 2oyr_A UPF0341 protein YHIQ; a 99.1 1.5E-10 5.2E-15 97.9 6.3 87 30-121 76-174 (258)
241 1m6y_A S-adenosyl-methyltransf 99.1 1E-09 3.5E-14 94.7 11.1 85 35-122 21-109 (301)
242 4a6d_A Hydroxyindole O-methylt 99.1 1.4E-09 4.8E-14 95.2 12.2 105 39-150 178-288 (353)
243 3dou_A Ribosomal RNA large sub 99.0 4.3E-10 1.5E-14 90.5 8.1 91 38-143 23-137 (191)
244 3ll7_A Putative methyltransfer 99.0 2.2E-10 7.6E-15 102.8 6.8 75 41-120 94-172 (410)
245 1qam_A ERMC' methyltransferase 99.0 2.4E-09 8.1E-14 89.3 12.4 95 20-121 9-104 (244)
246 3giw_A Protein of unknown func 99.0 2.1E-09 7.3E-14 91.7 12.3 110 34-145 72-200 (277)
247 4e2x_A TCAB9; kijanose, tetron 99.0 2E-10 6.8E-15 102.1 6.0 100 39-145 106-208 (416)
248 3fut_A Dimethyladenosine trans 99.0 3.2E-09 1.1E-13 90.3 13.1 106 8-121 8-120 (271)
249 3k0b_A Predicted N6-adenine-sp 99.0 1.2E-09 4.1E-14 97.5 10.6 119 24-145 185-350 (393)
250 3tos_A CALS11; methyltransfera 99.0 3.3E-09 1.1E-13 89.6 12.3 133 39-173 68-254 (257)
251 3ldu_A Putative methylase; str 99.0 1.2E-09 4E-14 97.2 9.7 119 24-145 179-344 (385)
252 3opn_A Putative hemolysin; str 99.0 8.2E-10 2.8E-14 91.6 8.0 106 31-144 28-136 (232)
253 2nyu_A Putative ribosomal RNA 99.0 1.7E-09 5.9E-14 85.6 9.1 97 38-145 20-145 (196)
254 3ldg_A Putative uncharacterize 99.0 3.3E-09 1.1E-13 94.4 12.0 119 24-145 178-343 (384)
255 2ih2_A Modification methylase 99.0 7.7E-10 2.6E-14 98.0 7.6 114 20-145 19-164 (421)
256 1af7_A Chemotaxis receptor met 98.9 2E-09 6.7E-14 91.8 8.0 103 40-144 105-251 (274)
257 3reo_A (ISO)eugenol O-methyltr 98.9 2E-09 6.8E-14 94.7 8.0 97 40-149 203-304 (368)
258 3p9c_A Caffeic acid O-methyltr 98.9 2.8E-09 9.4E-14 93.8 8.8 98 39-149 200-302 (364)
259 2zfu_A Nucleomethylin, cerebra 98.9 8E-10 2.7E-14 89.0 4.9 95 29-146 56-152 (215)
260 2okc_A Type I restriction enzy 98.9 2.2E-09 7.4E-14 96.9 7.7 120 23-145 154-307 (445)
261 3uzu_A Ribosomal RNA small sub 98.9 1.1E-08 3.8E-13 87.3 10.6 81 20-104 21-102 (279)
262 4fzv_A Putative methyltransfer 98.8 1.4E-08 4.7E-13 89.7 10.5 122 27-151 135-290 (359)
263 4azs_A Methyltransferase WBDD; 98.8 1.1E-08 3.7E-13 95.1 10.0 77 39-120 65-143 (569)
264 3c6k_A Spermine synthase; sper 98.8 8.4E-09 2.9E-13 91.5 8.5 101 39-143 204-329 (381)
265 2ar0_A M.ecoki, type I restric 98.8 1.5E-08 5.1E-13 93.8 10.4 122 22-144 151-311 (541)
266 1yub_A Ermam, rRNA methyltrans 98.8 2E-11 6.7E-16 101.6 -8.2 117 23-146 12-146 (245)
267 3ftd_A Dimethyladenosine trans 98.8 2.6E-08 9E-13 83.4 10.9 106 19-132 9-116 (249)
268 1fp2_A Isoflavone O-methyltran 98.8 4.2E-09 1.4E-13 91.7 6.2 98 39-149 187-292 (352)
269 1fp1_D Isoliquiritigenin 2'-O- 98.8 3E-09 1E-13 93.4 4.6 98 39-149 208-310 (372)
270 1qyr_A KSGA, high level kasuga 98.8 2.5E-08 8.6E-13 83.8 9.1 91 24-120 5-99 (252)
271 2wa2_A Non-structural protein 98.8 1.3E-09 4.4E-14 92.9 1.1 95 39-143 81-191 (276)
272 3frh_A 16S rRNA methylase; met 98.7 4.2E-08 1.5E-12 82.3 9.6 107 30-145 95-206 (253)
273 2xyq_A Putative 2'-O-methyl tr 98.7 1.7E-08 6E-13 86.6 7.3 90 38-145 61-171 (290)
274 2oxt_A Nucleoside-2'-O-methylt 98.7 1.9E-09 6.7E-14 91.2 0.7 95 39-143 73-183 (265)
275 3lcv_B Sisomicin-gentamicin re 98.7 1.9E-08 6.6E-13 85.3 6.3 112 29-146 120-237 (281)
276 3v97_A Ribosomal RNA large sub 98.7 7.9E-08 2.7E-12 91.6 10.8 121 24-145 174-347 (703)
277 2p41_A Type II methyltransfera 98.7 1.3E-08 4.4E-13 87.8 4.2 94 39-143 81-189 (305)
278 1zg3_A Isoflavanone 4'-O-methy 98.6 5.5E-08 1.9E-12 84.8 7.8 97 40-149 193-297 (358)
279 4gqb_A Protein arginine N-meth 98.6 5.5E-08 1.9E-12 91.5 7.8 97 40-140 357-462 (637)
280 3lkd_A Type I restriction-modi 98.5 4.5E-07 1.5E-11 84.0 10.6 130 20-150 197-365 (542)
281 2oo3_A Protein involved in cat 98.5 2.2E-07 7.7E-12 79.3 7.9 119 25-150 77-203 (283)
282 3ua3_A Protein arginine N-meth 98.5 2.2E-07 7.4E-12 88.1 8.3 99 41-140 410-529 (745)
283 3khk_A Type I restriction-modi 98.5 7.8E-08 2.7E-12 89.1 4.5 128 21-150 226-402 (544)
284 2ld4_A Anamorsin; methyltransf 98.4 1.7E-07 5.9E-12 73.0 3.8 87 38-146 10-102 (176)
285 1wg8_A Predicted S-adenosylmet 98.4 2.6E-06 8.8E-11 72.7 10.6 86 31-125 14-103 (285)
286 3s1s_A Restriction endonucleas 98.3 4.5E-06 1.5E-10 80.3 12.0 122 22-144 297-464 (878)
287 3pvc_A TRNA 5-methylaminomethy 98.2 2.5E-06 8.5E-11 80.6 8.8 102 39-141 57-207 (689)
288 2k4m_A TR8_protein, UPF0146 pr 97.9 3.5E-05 1.2E-09 59.7 7.7 83 40-143 35-119 (153)
289 3vyw_A MNMC2; tRNA wobble urid 97.9 9.2E-05 3.2E-09 63.9 10.8 132 39-175 95-260 (308)
290 3tka_A Ribosomal RNA small sub 97.9 3.2E-05 1.1E-09 67.5 7.9 83 37-124 54-141 (347)
291 1i4w_A Mitochondrial replicati 97.8 5.5E-05 1.9E-09 66.5 8.1 80 20-104 31-117 (353)
292 3ufb_A Type I restriction-modi 97.8 0.00014 4.7E-09 67.1 10.8 129 21-151 198-370 (530)
293 4auk_A Ribosomal RNA large sub 97.5 0.00053 1.8E-08 60.6 9.4 72 38-121 209-280 (375)
294 2zig_A TTHA0409, putative modi 97.4 0.00037 1.3E-08 59.2 8.2 45 39-88 234-278 (297)
295 3ps9_A TRNA 5-methylaminomethy 97.4 0.00041 1.4E-08 65.2 8.9 99 42-141 68-215 (676)
296 3evf_A RNA-directed RNA polyme 97.2 0.00025 8.4E-09 60.2 4.0 121 23-150 55-187 (277)
297 1pqw_A Polyketide synthase; ro 97.1 0.0009 3.1E-08 52.7 6.7 98 37-144 35-136 (198)
298 1f8f_A Benzyl alcohol dehydrog 97.1 0.0012 4.1E-08 57.4 7.7 100 37-144 187-288 (371)
299 3g7u_A Cytosine-specific methy 97.1 0.0015 5.1E-08 57.7 8.3 96 42-148 3-121 (376)
300 3s2e_A Zinc-containing alcohol 97.1 0.0015 5.2E-08 56.0 8.1 99 37-144 163-262 (340)
301 1pl8_A Human sorbitol dehydrog 97.0 0.0074 2.5E-07 52.1 11.7 97 36-144 167-272 (356)
302 3r24_A NSP16, 2'-O-methyl tran 97.0 0.0028 9.6E-08 54.4 8.6 125 40-194 109-260 (344)
303 3m6i_A L-arabinitol 4-dehydrog 96.9 0.015 5E-07 50.2 13.1 99 36-144 175-282 (363)
304 1g55_A DNA cytosine methyltran 96.8 0.0054 1.9E-07 53.2 9.3 74 41-120 2-77 (343)
305 2dph_A Formaldehyde dismutase; 96.7 0.0035 1.2E-07 55.0 7.7 103 36-144 181-298 (398)
306 3gcz_A Polyprotein; flavivirus 96.7 0.00043 1.5E-08 58.9 1.5 118 24-150 72-204 (282)
307 3fpc_A NADP-dependent alcohol 96.7 0.0034 1.1E-07 54.1 7.2 101 35-144 161-265 (352)
308 4ej6_A Putative zinc-binding d 96.7 0.0063 2.2E-07 52.9 8.9 101 35-144 177-283 (370)
309 2py6_A Methyltransferase FKBM; 96.6 0.0026 8.9E-08 56.6 6.1 59 39-98 225-288 (409)
310 1e3j_A NADP(H)-dependent ketos 96.6 0.023 8E-07 48.7 12.0 100 36-144 164-270 (352)
311 4b7c_A Probable oxidoreductase 96.6 0.0052 1.8E-07 52.4 7.6 100 36-144 145-247 (336)
312 4eez_A Alcohol dehydrogenase 1 96.6 0.018 6.2E-07 49.1 11.1 101 36-144 159-262 (348)
313 3uko_A Alcohol dehydrogenase c 96.6 0.0055 1.9E-07 53.3 7.8 102 36-145 189-295 (378)
314 1cdo_A Alcohol dehydrogenase; 96.6 0.008 2.8E-07 52.1 8.8 98 37-144 189-293 (374)
315 4a2c_A Galactitol-1-phosphate 96.6 0.019 6.5E-07 48.9 10.9 102 35-144 155-259 (346)
316 1uuf_A YAHK, zinc-type alcohol 96.5 0.018 6.1E-07 50.1 10.7 96 37-144 191-287 (369)
317 1v3u_A Leukotriene B4 12- hydr 96.5 0.0055 1.9E-07 52.2 7.2 98 37-144 142-243 (333)
318 1p0f_A NADP-dependent alcohol 96.5 0.0087 3E-07 51.9 8.4 98 37-144 188-292 (373)
319 2c0c_A Zinc binding alcohol de 96.5 0.0072 2.5E-07 52.3 7.9 98 36-144 159-260 (362)
320 2fzw_A Alcohol dehydrogenase c 96.5 0.011 3.7E-07 51.2 8.9 99 37-144 187-291 (373)
321 3ip1_A Alcohol dehydrogenase, 96.5 0.011 3.9E-07 51.8 9.2 101 38-144 211-317 (404)
322 3jv7_A ADH-A; dehydrogenase, n 96.5 0.014 4.8E-07 49.9 9.5 99 37-144 168-269 (345)
323 1e3i_A Alcohol dehydrogenase, 96.5 0.01 3.5E-07 51.5 8.6 98 37-144 192-296 (376)
324 3jyn_A Quinone oxidoreductase; 96.5 0.0046 1.6E-07 52.6 6.3 99 37-145 137-239 (325)
325 2jhf_A Alcohol dehydrogenase E 96.4 0.01 3.4E-07 51.5 8.4 98 37-144 188-292 (374)
326 3qwb_A Probable quinone oxidor 96.4 0.0045 1.5E-07 52.8 6.0 99 37-145 145-247 (334)
327 3eld_A Methyltransferase; flav 96.4 0.0033 1.1E-07 53.8 4.9 117 24-149 63-193 (300)
328 2px2_A Genome polyprotein [con 96.4 0.0019 6.5E-08 54.3 3.2 101 38-150 71-186 (269)
329 2hcy_A Alcohol dehydrogenase 1 96.3 0.0096 3.3E-07 51.1 7.7 99 37-144 166-268 (347)
330 3gms_A Putative NADPH:quinone 96.3 0.0053 1.8E-07 52.6 5.9 100 36-145 140-243 (340)
331 2c7p_A Modification methylase 96.3 0.026 8.9E-07 48.7 10.2 95 41-148 11-122 (327)
332 4eye_A Probable oxidoreductase 96.3 0.009 3.1E-07 51.3 7.2 97 37-144 156-256 (342)
333 1kol_A Formaldehyde dehydrogen 96.3 0.018 6.3E-07 50.2 9.2 103 36-144 181-299 (398)
334 1boo_A Protein (N-4 cytosine-s 96.3 0.0057 1.9E-07 52.6 5.8 54 91-144 12-83 (323)
335 1wly_A CAAR, 2-haloacrylate re 96.2 0.0079 2.7E-07 51.3 6.5 98 37-144 142-243 (333)
336 1qor_A Quinone oxidoreductase; 96.2 0.007 2.4E-07 51.4 6.0 99 37-145 137-239 (327)
337 2j3h_A NADP-dependent oxidored 96.2 0.0074 2.5E-07 51.6 6.0 99 37-144 152-254 (345)
338 4dvj_A Putative zinc-dependent 96.1 0.014 4.9E-07 50.5 7.8 97 40-145 171-270 (363)
339 3uog_A Alcohol dehydrogenase; 96.1 0.0088 3E-07 51.8 6.4 99 36-145 185-287 (363)
340 1rjw_A ADH-HT, alcohol dehydro 96.1 0.018 6.1E-07 49.3 8.2 98 37-144 161-260 (339)
341 1lss_A TRK system potassium up 96.1 0.037 1.3E-06 40.2 8.9 93 42-143 5-100 (140)
342 3fwz_A Inner membrane protein 96.1 0.035 1.2E-06 41.3 8.7 93 42-143 8-103 (140)
343 4dup_A Quinone oxidoreductase; 96.1 0.0089 3E-07 51.5 6.0 98 37-144 164-264 (353)
344 2zb4_A Prostaglandin reductase 96.0 0.017 5.8E-07 49.7 7.7 100 36-144 154-259 (357)
345 3two_A Mannitol dehydrogenase; 96.0 0.027 9.2E-07 48.3 9.0 91 37-144 173-264 (348)
346 1g60_A Adenine-specific methyl 96.0 0.0042 1.4E-07 51.6 3.4 52 93-144 4-73 (260)
347 1g60_A Adenine-specific methyl 95.9 0.02 6.7E-07 47.4 7.4 45 39-88 211-255 (260)
348 2eih_A Alcohol dehydrogenase; 95.9 0.012 4.2E-07 50.3 6.2 96 38-144 164-264 (343)
349 1iz0_A Quinone oxidoreductase; 95.8 0.035 1.2E-06 46.5 8.5 92 38-144 123-217 (302)
350 1eg2_A Modification methylase 95.8 0.01 3.6E-07 51.0 5.2 55 92-146 37-107 (319)
351 1jvb_A NAD(H)-dependent alcoho 95.8 0.024 8.2E-07 48.6 7.5 101 36-144 166-270 (347)
352 2zig_A TTHA0409, putative modi 95.8 0.011 3.8E-07 49.9 5.3 54 91-144 19-96 (297)
353 3fbg_A Putative arginate lyase 95.8 0.022 7.5E-07 48.8 7.2 95 40-143 150-246 (346)
354 3gaz_A Alcohol dehydrogenase s 95.7 0.031 1.1E-06 47.9 7.9 95 37-144 147-245 (343)
355 1yb5_A Quinone oxidoreductase; 95.6 0.018 6.3E-07 49.6 6.2 99 37-145 167-269 (351)
356 1piw_A Hypothetical zinc-type 95.6 0.024 8.1E-07 48.9 6.8 99 36-144 175-275 (360)
357 3ubt_Y Modification methylase 95.6 0.063 2.1E-06 45.5 9.3 94 43-148 2-112 (331)
358 1vj0_A Alcohol dehydrogenase, 95.6 0.024 8.3E-07 49.3 6.8 95 38-144 193-297 (380)
359 3b5i_A S-adenosyl-L-methionine 95.5 0.016 5.6E-07 51.0 5.4 78 41-119 53-158 (374)
360 3llv_A Exopolyphosphatase-rela 95.5 0.077 2.6E-06 39.0 8.5 71 42-121 7-80 (141)
361 2j8z_A Quinone oxidoreductase; 95.5 0.027 9.3E-07 48.5 6.7 98 37-144 159-260 (354)
362 2h6e_A ADH-4, D-arabinose 1-de 95.4 0.12 4.1E-06 44.0 10.7 97 37-144 168-268 (344)
363 4a0s_A Octenoyl-COA reductase/ 95.4 0.082 2.8E-06 46.8 9.8 99 36-144 216-335 (447)
364 2b5w_A Glucose dehydrogenase; 95.3 0.036 1.2E-06 47.7 7.0 98 36-144 162-272 (357)
365 1id1_A Putative potassium chan 95.3 0.13 4.4E-06 38.5 9.4 97 41-143 3-103 (153)
366 3gg2_A Sugar dehydrogenase, UD 95.3 0.12 4.1E-06 46.4 10.5 100 43-151 4-127 (450)
367 3lkz_A Non-structural protein 95.2 0.025 8.7E-07 48.4 5.6 119 23-150 75-207 (321)
368 2d8a_A PH0655, probable L-thre 95.2 0.023 7.8E-07 48.7 5.4 95 40-144 167-266 (348)
369 3gqv_A Enoyl reductase; medium 95.2 0.098 3.4E-06 45.2 9.5 96 39-144 163-262 (371)
370 3c85_A Putative glutathione-re 95.2 0.13 4.5E-06 39.6 9.3 93 41-143 39-137 (183)
371 2efj_A 3,7-dimethylxanthine me 95.1 0.05 1.7E-06 48.1 7.4 77 41-119 53-157 (384)
372 3p8z_A Mtase, non-structural p 95.1 0.023 7.9E-07 47.3 4.8 119 23-151 59-190 (267)
373 4h0n_A DNMT2; SAH binding, tra 95.1 0.11 3.9E-06 44.8 9.3 98 42-148 4-121 (333)
374 2cf5_A Atccad5, CAD, cinnamyl 95.0 0.12 4.1E-06 44.4 9.4 97 37-144 176-274 (357)
375 3ic5_A Putative saccharopine d 94.9 0.39 1.3E-05 33.4 10.6 84 41-133 5-91 (118)
376 2g1u_A Hypothetical protein TM 94.8 0.16 5.3E-06 38.2 8.6 97 39-143 17-116 (155)
377 2dq4_A L-threonine 3-dehydroge 94.7 0.018 6.1E-07 49.3 3.3 94 40-144 164-261 (343)
378 3l4b_C TRKA K+ channel protien 94.7 0.16 5.5E-06 40.3 8.8 92 44-143 3-97 (218)
379 1boo_A Protein (N-4 cytosine-s 94.6 0.027 9.3E-07 48.3 4.1 64 38-106 250-313 (323)
380 1yqd_A Sinapyl alcohol dehydro 94.5 0.21 7.3E-06 43.0 9.7 94 40-144 187-281 (366)
381 2y0c_A BCEC, UDP-glucose dehyd 94.4 0.12 3.9E-06 46.9 8.0 103 40-151 7-133 (478)
382 2cdc_A Glucose dehydrogenase g 94.3 0.11 3.8E-06 44.7 7.5 92 41-144 181-277 (366)
383 3nx4_A Putative oxidoreductase 94.3 0.079 2.7E-06 44.6 6.4 89 43-144 149-240 (324)
384 1m6e_X S-adenosyl-L-methionnin 94.3 0.029 9.8E-07 49.2 3.7 78 41-119 52-147 (359)
385 2vn8_A Reticulon-4-interacting 94.3 0.15 5.1E-06 44.1 8.2 97 38-144 181-279 (375)
386 3pi7_A NADH oxidoreductase; gr 94.2 0.15 5.2E-06 43.5 8.1 95 42-145 166-263 (349)
387 3goh_A Alcohol dehydrogenase, 94.2 0.088 3E-06 44.3 6.4 89 37-144 139-228 (315)
388 1xa0_A Putative NADPH dependen 94.1 0.062 2.1E-06 45.4 5.4 91 43-144 152-245 (328)
389 3ggo_A Prephenate dehydrogenas 94.1 0.21 7.3E-06 42.4 8.7 95 42-150 34-131 (314)
390 3krt_A Crotonyl COA reductase; 93.9 0.093 3.2E-06 46.8 6.3 98 37-144 225-343 (456)
391 1bg6_A N-(1-D-carboxylethyl)-L 93.9 0.39 1.3E-05 40.7 10.0 96 42-145 5-108 (359)
392 2aef_A Calcium-gated potassium 93.8 0.41 1.4E-05 38.3 9.5 92 41-143 9-103 (234)
393 3l9w_A Glutathione-regulated p 93.7 0.23 7.7E-06 44.1 8.3 93 42-143 5-100 (413)
394 2qrv_A DNA (cytosine-5)-methyl 93.6 0.21 7.3E-06 42.3 7.8 73 39-118 14-90 (295)
395 3k96_A Glycerol-3-phosphate de 93.3 0.5 1.7E-05 41.0 9.7 102 41-150 29-138 (356)
396 4a27_A Synaptic vesicle membra 93.2 0.093 3.2E-06 44.9 4.9 98 36-145 138-238 (349)
397 3qv2_A 5-cytosine DNA methyltr 93.2 0.14 4.8E-06 44.1 5.9 71 41-118 10-83 (327)
398 3oig_A Enoyl-[acyl-carrier-pro 93.1 1.7 5.6E-05 35.1 12.2 103 40-146 6-148 (266)
399 4a7p_A UDP-glucose dehydrogena 92.9 0.25 8.6E-06 44.3 7.5 101 42-151 9-134 (446)
400 3gt0_A Pyrroline-5-carboxylate 92.8 0.18 6.1E-06 41.0 5.9 87 43-143 4-94 (247)
401 1tt7_A YHFP; alcohol dehydroge 92.7 0.16 5.6E-06 42.8 5.7 89 43-144 153-246 (330)
402 3tqh_A Quinone oxidoreductase; 92.6 0.67 2.3E-05 38.9 9.5 94 36-144 148-244 (321)
403 3me5_A Cytosine-specific methy 92.5 0.33 1.1E-05 44.0 7.7 71 42-118 89-176 (482)
404 2hmt_A YUAA protein; RCK, KTN, 92.4 0.39 1.3E-05 34.6 6.8 93 41-143 6-102 (144)
405 1gu7_A Enoyl-[acyl-carrier-pro 92.4 0.37 1.3E-05 41.2 7.6 98 37-144 163-274 (364)
406 1mv8_A GMD, GDP-mannose 6-dehy 92.3 0.52 1.8E-05 41.7 8.6 101 43-151 2-128 (436)
407 1rjd_A PPM1P, carboxy methyl t 92.1 1.3 4.5E-05 38.0 10.8 109 36-149 93-236 (334)
408 3pxx_A Carveol dehydrogenase; 92.0 2 6.9E-05 34.9 11.4 105 39-145 8-153 (287)
409 4dcm_A Ribosomal RNA large sub 92.0 0.63 2.2E-05 40.5 8.7 95 40-146 38-137 (375)
410 1eg2_A Modification methylase 91.9 0.73 2.5E-05 39.3 8.8 45 39-88 241-288 (319)
411 3pid_A UDP-glucose 6-dehydroge 91.7 0.73 2.5E-05 41.2 8.8 104 37-151 32-158 (432)
412 4e12_A Diketoreductase; oxidor 91.6 1.1 3.7E-05 37.1 9.4 98 41-148 4-122 (283)
413 2eez_A Alanine dehydrogenase; 91.6 0.68 2.3E-05 40.1 8.4 96 39-142 164-263 (369)
414 2g5c_A Prephenate dehydrogenas 91.5 0.43 1.5E-05 39.2 6.8 88 43-143 3-93 (281)
415 3o26_A Salutaridine reductase; 91.5 0.7 2.4E-05 37.9 8.0 80 40-121 11-101 (311)
416 4dzz_A Plasmid partitioning pr 91.5 0.52 1.8E-05 36.3 6.9 72 50-123 11-87 (206)
417 2f1k_A Prephenate dehydrogenas 91.4 0.39 1.3E-05 39.4 6.3 87 43-143 2-88 (279)
418 3ijr_A Oxidoreductase, short c 91.3 2.3 7.9E-05 35.1 11.1 104 40-145 46-182 (291)
419 3i83_A 2-dehydropantoate 2-red 91.3 0.31 1E-05 41.2 5.7 100 42-150 3-110 (320)
420 1h2b_A Alcohol dehydrogenase; 91.2 0.56 1.9E-05 40.1 7.5 99 36-144 182-284 (359)
421 1dlj_A UDP-glucose dehydrogena 91.2 0.61 2.1E-05 40.9 7.8 98 43-151 2-122 (402)
422 4fgs_A Probable dehydrogenase 90.9 1.6 5.4E-05 36.4 9.8 107 34-145 22-159 (273)
423 2v6b_A L-LDH, L-lactate dehydr 90.9 3.9 0.00013 34.3 12.3 99 43-148 2-119 (304)
424 1lnq_A MTHK channels, potassiu 90.8 1.7 5.9E-05 36.6 10.1 92 41-143 115-209 (336)
425 4fn4_A Short chain dehydrogena 90.7 1.4 4.8E-05 36.3 9.1 79 39-119 5-92 (254)
426 1pjc_A Protein (L-alanine dehy 90.7 1 3.4E-05 38.9 8.6 103 39-151 165-271 (361)
427 3hwr_A 2-dehydropantoate 2-red 90.6 0.91 3.1E-05 38.3 8.1 102 40-150 18-125 (318)
428 3imf_A Short chain dehydrogena 90.3 1.7 5.9E-05 35.0 9.3 79 40-120 5-92 (257)
429 3sju_A Keto reductase; short-c 90.2 1.8 6.2E-05 35.5 9.4 79 40-120 23-110 (279)
430 4ezb_A Uncharacterized conserv 90.2 1 3.6E-05 38.0 8.1 87 42-143 25-118 (317)
431 4f3n_A Uncharacterized ACR, CO 90.1 0.5 1.7E-05 42.3 6.2 48 40-88 137-187 (432)
432 4eso_A Putative oxidoreductase 90.1 2.3 8E-05 34.3 9.9 102 39-145 6-138 (255)
433 3h2s_A Putative NADH-flavin re 90.1 3.3 0.00011 32.0 10.5 71 43-121 2-72 (224)
434 2ew2_A 2-dehydropantoate 2-red 90.1 1.5 5.1E-05 36.0 8.9 97 42-143 4-105 (316)
435 2vhw_A Alanine dehydrogenase; 89.9 0.87 3E-05 39.6 7.5 96 39-142 166-265 (377)
436 1lld_A L-lactate dehydrogenase 89.8 1.7 5.9E-05 36.2 9.1 100 40-148 6-127 (319)
437 3e8x_A Putative NAD-dependent 89.7 0.91 3.1E-05 35.9 7.0 74 40-121 20-94 (236)
438 3ojo_A CAP5O; rossmann fold, c 89.7 1.3 4.5E-05 39.4 8.6 91 51-151 18-134 (431)
439 4e21_A 6-phosphogluconate dehy 89.6 0.85 2.9E-05 39.5 7.2 91 41-143 22-112 (358)
440 3h7a_A Short chain dehydrogena 89.6 1.5 5.2E-05 35.4 8.4 79 40-120 6-92 (252)
441 1zu4_A FTSY; GTPase, signal re 89.6 1.1 3.6E-05 38.3 7.7 81 41-122 105-202 (320)
442 3p2y_A Alanine dehydrogenase/p 89.5 1 3.6E-05 39.6 7.7 105 40-151 183-306 (381)
443 3qiv_A Short-chain dehydrogena 89.4 2.1 7.3E-05 34.1 9.1 79 40-120 8-95 (253)
444 3c24_A Putative oxidoreductase 89.4 0.98 3.3E-05 37.3 7.2 87 42-143 12-98 (286)
445 3ucx_A Short chain dehydrogena 89.4 2.2 7.6E-05 34.5 9.3 79 39-119 9-96 (264)
446 3vtf_A UDP-glucose 6-dehydroge 89.3 0.31 1E-05 43.9 4.2 102 42-151 22-149 (444)
447 2dpo_A L-gulonate 3-dehydrogen 89.2 1.9 6.5E-05 36.7 9.0 98 41-148 6-124 (319)
448 3v8b_A Putative dehydrogenase, 89.2 2.9 9.8E-05 34.4 9.9 80 39-120 26-114 (283)
449 1zsy_A Mitochondrial 2-enoyl t 89.1 1.2 4.1E-05 38.0 7.7 95 37-144 164-269 (357)
450 1zkd_A DUF185; NESG, RPR58, st 89.0 1.6 5.6E-05 38.4 8.6 72 24-97 57-140 (387)
451 4g65_A TRK system potassium up 89.0 1.5 5.1E-05 39.3 8.6 71 42-120 4-77 (461)
452 1jay_A Coenzyme F420H2:NADP+ o 88.9 1 3.6E-05 35.1 6.7 91 43-143 2-94 (212)
453 3iht_A S-adenosyl-L-methionine 88.9 2.7 9.2E-05 32.6 8.6 99 41-149 41-150 (174)
454 3b1f_A Putative prephenate deh 88.8 1 3.5E-05 37.0 6.9 90 41-143 6-98 (290)
455 3r3s_A Oxidoreductase; structu 88.7 4.8 0.00016 33.1 11.0 105 40-146 48-186 (294)
456 1hyh_A L-hicdh, L-2-hydroxyiso 88.7 2.9 9.8E-05 35.0 9.7 96 43-147 3-124 (309)
457 2vz8_A Fatty acid synthase; tr 88.6 0.89 3.1E-05 49.0 7.8 100 37-144 1664-1769(2512)
458 3lyl_A 3-oxoacyl-(acyl-carrier 88.5 2.7 9.4E-05 33.3 9.1 79 40-120 4-91 (247)
459 2i6t_A Ubiquitin-conjugating e 88.5 4 0.00014 34.4 10.5 100 40-148 13-128 (303)
460 1f0y_A HCDH, L-3-hydroxyacyl-C 88.4 1.9 6.5E-05 35.8 8.3 96 42-147 16-136 (302)
461 1y6j_A L-lactate dehydrogenase 88.4 4 0.00014 34.5 10.4 101 40-147 6-125 (318)
462 2qr3_A Two-component system re 88.3 5 0.00017 28.0 10.0 67 67-134 3-77 (140)
463 3c7a_A Octopine dehydrogenase; 88.2 1.6 5.6E-05 37.8 8.1 93 43-143 4-113 (404)
464 3ius_A Uncharacterized conserv 88.2 1.6 5.5E-05 35.3 7.6 80 42-133 6-90 (286)
465 3o38_A Short chain dehydrogena 88.2 2.6 8.8E-05 33.9 8.8 78 39-120 20-110 (266)
466 2o3j_A UDP-glucose 6-dehydroge 88.2 1.2 4E-05 40.2 7.3 101 42-151 10-140 (481)
467 2vz8_A Fatty acid synthase; tr 88.2 0.12 4.2E-06 55.5 0.9 102 41-145 1241-1348(2512)
468 4dio_A NAD(P) transhydrogenase 88.2 1.4 4.9E-05 39.0 7.7 42 40-85 189-231 (405)
469 3is3_A 17BETA-hydroxysteroid d 88.1 6 0.00021 32.0 11.1 106 39-146 16-153 (270)
470 2zyd_A 6-phosphogluconate dehy 88.1 2.7 9.2E-05 37.8 9.6 94 42-143 16-110 (480)
471 3d1l_A Putative NADP oxidoredu 88.1 0.86 2.9E-05 37.0 5.9 88 42-143 11-99 (266)
472 3db2_A Putative NADPH-dependen 88.1 4.4 0.00015 34.3 10.6 95 40-149 4-100 (354)
473 3eod_A Protein HNR; response r 88.0 5 0.00017 27.8 9.7 77 67-145 7-86 (130)
474 3tjr_A Short chain dehydrogena 88.0 2.8 9.7E-05 34.7 9.2 80 39-120 29-117 (301)
475 3ktd_A Prephenate dehydrogenas 88.0 0.73 2.5E-05 39.8 5.6 96 42-150 9-104 (341)
476 4e7p_A Response regulator; DNA 88.0 5.8 0.0002 28.4 10.1 77 68-145 21-101 (150)
477 2q3e_A UDP-glucose 6-dehydroge 87.8 1.5 5E-05 39.2 7.7 101 42-151 6-136 (467)
478 4ft4_B DNA (cytosine-5)-methyl 87.8 1.7 5.7E-05 41.3 8.4 59 41-104 212-273 (784)
479 3rkr_A Short chain oxidoreduct 87.7 2.6 9E-05 34.0 8.6 80 39-120 27-115 (262)
480 3g79_A NDP-N-acetyl-D-galactos 87.7 3.5 0.00012 37.2 10.1 103 39-151 16-152 (478)
481 3qvo_A NMRA family protein; st 87.7 4.2 0.00014 32.1 9.7 76 41-124 23-101 (236)
482 1wma_A Carbonyl reductase [NAD 87.6 1.3 4.5E-05 35.3 6.7 79 40-120 3-91 (276)
483 3iup_A Putative NADPH:quinone 87.5 0.56 1.9E-05 40.6 4.6 96 39-140 169-271 (379)
484 2gn4_A FLAA1 protein, UDP-GLCN 87.5 2.6 9E-05 35.6 8.8 79 39-121 19-101 (344)
485 3tfo_A Putative 3-oxoacyl-(acy 87.5 2.6 9.1E-05 34.4 8.5 79 40-120 3-90 (264)
486 1y1p_A ARII, aldehyde reductas 87.4 1.7 5.8E-05 35.9 7.4 79 40-120 10-92 (342)
487 2iz1_A 6-phosphogluconate dehy 87.4 2.2 7.5E-05 38.2 8.6 94 42-143 6-100 (474)
488 3hv2_A Response regulator/HD d 87.2 5.8 0.0002 28.5 9.6 76 67-144 14-92 (153)
489 3i1j_A Oxidoreductase, short c 87.2 3.1 0.00011 32.9 8.7 79 40-120 13-103 (247)
490 3ezy_A Dehydrogenase; structur 87.2 7.4 0.00025 32.7 11.5 92 43-148 4-97 (344)
491 3v2g_A 3-oxoacyl-[acyl-carrier 87.2 8.4 0.00029 31.3 11.5 105 39-145 29-165 (271)
492 3ioy_A Short-chain dehydrogena 87.1 3.1 0.00011 34.8 9.0 79 40-120 7-96 (319)
493 3tri_A Pyrroline-5-carboxylate 87.1 2.1 7.1E-05 35.5 7.7 88 42-143 4-95 (280)
494 3f1l_A Uncharacterized oxidore 87.1 2.6 9E-05 33.8 8.2 79 40-120 11-101 (252)
495 3gaf_A 7-alpha-hydroxysteroid 87.0 2.6 8.8E-05 34.0 8.1 79 40-120 11-98 (256)
496 3t8y_A CHEB, chemotaxis respon 87.0 4.4 0.00015 29.8 8.9 83 50-133 9-95 (164)
497 3svt_A Short-chain type dehydr 87.0 4.5 0.00015 32.9 9.7 80 39-120 9-100 (281)
498 1yb1_A 17-beta-hydroxysteroid 87.0 4.1 0.00014 33.0 9.4 79 40-120 30-117 (272)
499 1txg_A Glycerol-3-phosphate de 86.9 1.5 5.3E-05 36.5 6.9 98 43-148 2-107 (335)
500 2rjn_A Response regulator rece 86.9 6.8 0.00023 28.1 10.3 76 67-144 7-85 (154)
No 1
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.97 E-value=3.8e-29 Score=207.32 Aligned_cols=153 Identities=18% Similarity=0.228 Sum_probs=136.6
Q ss_pred cCCChhHHHHHHHHHhhCCCC---eEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCC-CcEE
Q 041509 22 KAKEPNEAEFISALAAGNNAQ---LMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDA-SHVE 95 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~---~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~-~~V~ 95 (211)
..++|.++++|..++...+++ +|||+ |||+|++|++||+++++ +++|++||+++++++.|+++++ ++. ++|+
T Consensus 35 p~i~~~~~~~l~~l~~~~~~~~~~~vLdi-G~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~ 112 (221)
T 3dr5_A 35 PAPDEMTGQLLTTLAATTNGNGSTGAIAI-TPAAGLVGLYILNGLAD-NTTLTCIDPESEHQRQAKALFREAGYSPSRVR 112 (221)
T ss_dssp CCCCHHHHHHHHHHHHHSCCTTCCEEEEE-STTHHHHHHHHHHHSCT-TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCEEEE-cCCchHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEE
Confidence 468999999999999998888 99999 99999999999999864 7999999999999999999998 666 7999
Q ss_pred EEEcchHHHhhhc-cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc----------------e-----
Q 041509 96 FVIGDAQSLLLSH-FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS----------------W----- 153 (211)
Q Consensus 96 ~~~gda~e~l~~l-~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~----------------~----- 153 (211)
+++||+.+.++.+ .++||+||+|+.+.+|.++++.+.++|+||| ++++||++++|. |
T Consensus 113 ~~~gda~~~l~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG-~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~ 191 (221)
T 3dr5_A 113 FLLSRPLDVMSRLANDSYQLVFGQVSPMDLKALVDAAWPLLRRGG-ALVLADALLDGTIADQTRKDRDTQAARDADEYIR 191 (221)
T ss_dssp EECSCHHHHGGGSCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEE-EEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHT
T ss_pred EEEcCHHHHHHHhcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCc-EEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHh
Confidence 9999999998876 6899999999999999999999999999966 556699998652 1
Q ss_pred ecCCCcEEEeecCCcEEEEEEecc
Q 041509 154 RSSGSKSQLLPIGEGLLVTRIAAA 177 (211)
Q Consensus 154 ~~~~~~~v~lpig~Gl~v~~~~~~ 177 (211)
.+++++++++|+|||++++++.-.
T Consensus 192 ~~~~~~~~~lp~gdGl~~~~~~~~ 215 (221)
T 3dr5_A 192 SIEGAHVARLPLGAGLTVVTKALE 215 (221)
T ss_dssp TCTTEEEEEESSTTCEEEEEECCC
T ss_pred hCCCeeEEEeeccchHHHHHHHHH
Confidence 168999999999999999998653
No 2
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.95 E-value=1.8e-28 Score=205.65 Aligned_cols=153 Identities=20% Similarity=0.248 Sum_probs=134.9
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.+++.++++|..++...++++|||+ |||+|++|++||+++++ +++|++||+++++++.|+++++ ++.++|++++||
T Consensus 43 ~i~~~~~~~l~~l~~~~~~~~VLDi-G~G~G~~t~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 120 (242)
T 3r3h_A 43 QVAPEQAQFMQMLIRLTRAKKVLEL-GTFTGYSALAMSLALPD-DGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGP 120 (242)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEE-ESCCSHHHHHHHHTSCT-TCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESC
T ss_pred ccCHHHHHHHHHHHhhcCcCEEEEe-eCCcCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 4789999999999999999999999 99999999999998864 7999999999999999999998 667799999999
Q ss_pred hHHHhhhc-----cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc----------------e-----e
Q 041509 101 AQSLLLSH-----FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS----------------W-----R 154 (211)
Q Consensus 101 a~e~l~~l-----~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~----------------~-----~ 154 (211)
+.+.++.+ .++||+||+|+++.+|..+++.+.++|+||| ++++||++++|. + .
T Consensus 121 a~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG-~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~ 199 (242)
T 3r3h_A 121 ALDTLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPKG-LIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKN 199 (242)
T ss_dssp HHHHHHHHHHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEE-EEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCe-EEEEECCccCCcccCccccChHHHHHHHHHHHHhh
Confidence 99988765 4899999999999999999999999999966 555699988662 1 1
Q ss_pred cCCCcEEEeecCCcEEEEEEeccC
Q 041509 155 SSGSKSQLLPIGEGLLVTRIAAAS 178 (211)
Q Consensus 155 ~~~~~~v~lpig~Gl~v~~~~~~~ 178 (211)
+++|+++++|+|||+.+++|+.+.
T Consensus 200 ~~~~~~~~lp~~dG~~~~~k~~~~ 223 (242)
T 3r3h_A 200 DSRVFVSLLAIADGMFLVQPIAEN 223 (242)
T ss_dssp CCSEEEEEESSSSCEEEEEEC---
T ss_pred CCCEEEEEEEccCceEEEEEcCCC
Confidence 689999999999999999997753
No 3
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.95 E-value=2.1e-27 Score=199.77 Aligned_cols=151 Identities=21% Similarity=0.270 Sum_probs=133.7
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEc
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIG 99 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~g 99 (211)
..+.+.++++|..++...++++|||| |||+|++++++++++++ +++|++||+++++++.|+++++ ++.++|++++|
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLei-G~G~G~~~~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g 138 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEI-GVYTGYSLLATALAIPE-DGKILAMDINKENYELGLPVIKKAGVDHKIDFREG 138 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEE-CCGGGHHHHHHHHHSCT-TCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEe-CCCcCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 35789999999999999999999999 99999999999999864 7999999999999999999998 66678999999
Q ss_pred chHHHhhhc------cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCce--------------------
Q 041509 100 DAQSLLLSH------FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGSW-------------------- 153 (211)
Q Consensus 100 da~e~l~~l------~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~~-------------------- 153 (211)
|+.+.++.+ .++||+||+|+++.+|..+++.+.++|+|||.+ ++||++++|..
T Consensus 139 da~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~l-v~d~~~~~g~v~~~~~~~~~~~~~~~~~~i~ 217 (247)
T 1sui_A 139 PALPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVI-GYDNTLWNGSVVAPPDAPLRKYVRYYRDFVL 217 (247)
T ss_dssp CHHHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCE-EEECTTGGGGGGCCTTSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEE-EEecCCcCCcccCCCccchhhhhhHHHHHHH
Confidence 999988765 478999999999999999999999999997765 55998875510
Q ss_pred -------ecCCCcEEEeecCCcEEEEEEe
Q 041509 154 -------RSSGSKSQLLPIGEGLLVTRIA 175 (211)
Q Consensus 154 -------~~~~~~~v~lpig~Gl~v~~~~ 175 (211)
.++++.++++|++||+++++|+
T Consensus 218 ~~~~~l~~~~~~~~~~lp~~dG~~l~~k~ 246 (247)
T 1sui_A 218 ELNKALAVDPRIEICMLPVGDGITICRRI 246 (247)
T ss_dssp HHHHHHHTCTTBCCEEECSTTCEEEECBC
T ss_pred HHHHHHhhCCCeEEEEEecCCccEEEEEc
Confidence 1588999999999999999875
No 4
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.95 E-value=4.2e-27 Score=196.40 Aligned_cols=150 Identities=19% Similarity=0.197 Sum_probs=133.1
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.+.+.++++|..++...++++|||| |||+|++++++++++++ +++|+++|+++++++.|+++++ ++.++|++++||
T Consensus 53 ~~~~~~~~~l~~l~~~~~~~~VLei-G~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 130 (237)
T 3c3y_A 53 STSPLAGQLMSFVLKLVNAKKTIEV-GVFTGYSLLLTALSIPD-DGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESD 130 (237)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEE-CCTTSHHHHHHHHHSCT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEe-CCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 5789999999999999999999999 99999999999999864 7999999999999999999998 666789999999
Q ss_pred hHHHhhhc------cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc---------------------e
Q 041509 101 AQSLLLSH------FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS---------------------W 153 (211)
Q Consensus 101 a~e~l~~l------~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~---------------------~ 153 (211)
+.+.++.+ .++||+||+|+++.+|.++++.+.++|+||| ++++||++++|. +
T Consensus 131 a~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG-~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~ 209 (237)
T 3c3y_A 131 AMLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGG-IVAYDNTLWGGTVAQPESEVPDFMKENREAVIEL 209 (237)
T ss_dssp HHHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEE-EEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCe-EEEEecCCcCCccCCCcccchhhHHHHHHHHHHH
Confidence 99988765 4789999999999999999999999999966 556699876531 0
Q ss_pred -----ecCCCcEEEeecCCcEEEEEEe
Q 041509 154 -----RSSGSKSQLLPIGEGLLVTRIA 175 (211)
Q Consensus 154 -----~~~~~~~v~lpig~Gl~v~~~~ 175 (211)
.++++.++++|++||+++++|+
T Consensus 210 ~~~l~~~~~~~~~~lp~~dG~~~~~~~ 236 (237)
T 3c3y_A 210 NKLLAADPRIEIVHLPLGDGITFCRRL 236 (237)
T ss_dssp HHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHhcCCCeEEEEEEeCCceEEEEEc
Confidence 1688999999999999999985
No 5
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.94 E-value=3.9e-26 Score=187.06 Aligned_cols=152 Identities=17% Similarity=0.248 Sum_probs=133.7
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEc
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIG 99 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~g 99 (211)
..+.+..++++..++...++++|||+ |||+|++|++++..++. +++|+++|+++++++.|+++++ +..++|+++++
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdi-G~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 123 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDI-GTFTGYSAIAMGLALPK-DGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS 123 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEE-CCTTSHHHHHHHTTCCT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEe-CCcchHHHHHHHHhCCC-CCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC
Confidence 45889999999999998899999999 99999999999998753 7899999999999999999998 66678999999
Q ss_pred chHHHhhhcc-----CCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCce---------------------
Q 041509 100 DAQSLLLSHF-----READFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGSW--------------------- 153 (211)
Q Consensus 100 da~e~l~~l~-----~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~~--------------------- 153 (211)
|+.+.++.+. ++||+||+|+....+..+++.+.++|+|||. ++++|+++++.+
T Consensus 124 d~~~~~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~-lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 202 (225)
T 3tr6_A 124 PAKDTLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGL-IAVDNVLRRGQVADEENQSENNQLIRLFNQKVY 202 (225)
T ss_dssp CHHHHHHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEE-EEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcE-EEEeCCCcCCcccCccccChHHHHHHHHHHHHh
Confidence 9998877653 7999999999999999999999999999665 555998876521
Q ss_pred ecCCCcEEEeecCCcEEEEEEec
Q 041509 154 RSSGSKSQLLPIGEGLLVTRIAA 176 (211)
Q Consensus 154 ~~~~~~~v~lpig~Gl~v~~~~~ 176 (211)
.+++++++++|+++|+.+++|++
T Consensus 203 ~~~~~~~~~lp~~dG~~~~~k~~ 225 (225)
T 3tr6_A 203 KDERVDMILIPIGDGLTLARKKS 225 (225)
T ss_dssp HCTTEEEEEECSTTCEEEEEECC
T ss_pred cCCCeEEEEEEcCCccEEEEECC
Confidence 16889999999999999999863
No 6
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.94 E-value=1.7e-25 Score=185.65 Aligned_cols=149 Identities=17% Similarity=0.214 Sum_probs=132.4
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.+.+..++++..++...++++|||+ |||+|+++++++.+.+ +++|+++|+++++++.|+++++ ++.++|+++.+|
T Consensus 54 ~~~~~~~~~l~~~~~~~~~~~vLDi-G~G~G~~~~~la~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 130 (232)
T 3ntv_A 54 IVDRLTLDLIKQLIRMNNVKNILEI-GTAIGYSSMQFASISD--DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGN 130 (232)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEEE-CCSSSHHHHHHHTTCT--TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CcCHHHHHHHHHHHhhcCCCEEEEE-eCchhHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC
Confidence 4788899999999998899999999 9999999999998553 7899999999999999999998 666799999999
Q ss_pred hHHHhh-hccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc-----e---------------------
Q 041509 101 AQSLLL-SHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS-----W--------------------- 153 (211)
Q Consensus 101 a~e~l~-~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~-----~--------------------- 153 (211)
+.+.++ .+.++||+||+|+....|.++++.+.++|+|||. +++||++++|. .
T Consensus 131 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~-lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (232)
T 3ntv_A 131 ALEQFENVNDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGL-VITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLI 209 (232)
T ss_dssp GGGCHHHHTTSCEEEEEEETTSSSHHHHHHHHGGGEEEEEE-EEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCccEEEEcCcHHHHHHHHHHHHHhcCCCeE-EEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHh
Confidence 999887 6678999999999999999999999999999665 56699988652 0
Q ss_pred ecCCCcEEEeecCCcEEEEEEe
Q 041509 154 RSSGSKSQLLPIGEGLLVTRIA 175 (211)
Q Consensus 154 ~~~~~~~v~lpig~Gl~v~~~~ 175 (211)
.+++++++++|++||+.+++|+
T Consensus 210 ~~~~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 210 KQPGYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp TCTTEEEEEECSTTCEEEEEEC
T ss_pred cCCCeEEEEEEcCCceEEEEEC
Confidence 1688999999999999999985
No 7
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=4.7e-25 Score=184.97 Aligned_cols=152 Identities=19% Similarity=0.279 Sum_probs=132.8
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.+.+..+++|..++...++++|||| |||+|++|++++.++++ +++|+++|+++++++.|+++++ +..++|+++.+|
T Consensus 46 ~~~~~~~~~l~~l~~~~~~~~VLdi-G~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d 123 (248)
T 3tfw_A 46 DVAANQGQFLALLVRLTQAKRILEI-GTLGGYSTIWMARELPA-DGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGP 123 (248)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEE-CCTTSHHHHHHHTTSCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred ccCHHHHHHHHHHHhhcCCCEEEEe-cCCchHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 3668999999999988899999999 99999999999998853 7899999999999999999998 667799999999
Q ss_pred hHHHhhhccC--CccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc----------------e-----ecCC
Q 041509 101 AQSLLLSHFR--EADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS----------------W-----RSSG 157 (211)
Q Consensus 101 a~e~l~~l~~--~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~----------------~-----~~~~ 157 (211)
+.+.++.+.+ +||+||+|++...|..+++.+.++|+|||.+ +++|+++.|. + .+++
T Consensus 124 ~~~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~l-v~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (248)
T 3tfw_A 124 ALQSLESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLI-IGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPR 202 (248)
T ss_dssp HHHHHHTCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEE-EEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHhcCCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEE-EEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCC
Confidence 9998876644 8999999999999999999999999997755 5599887641 1 1688
Q ss_pred CcEEEe-ecC----CcEEEEEEecc
Q 041509 158 SKSQLL-PIG----EGLLVTRIAAA 177 (211)
Q Consensus 158 ~~~v~l-pig----~Gl~v~~~~~~ 177 (211)
|+++++ |+| ||+.++++++.
T Consensus 203 ~~~~~l~~~g~~~~DG~~i~~~~~~ 227 (248)
T 3tfw_A 203 LTATALQTVGTKGWDGFTLAWVNAA 227 (248)
T ss_dssp EEEEEEEECSTTCSEEEEEEEECCC
T ss_pred EEEEEeecCCCCCCCeeEEEEEeCC
Confidence 998887 777 99999999874
No 8
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.93 E-value=5e-25 Score=180.42 Aligned_cols=150 Identities=20% Similarity=0.302 Sum_probs=132.0
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.+++..+++|..++...++++|||+ |||+|++++++++++++ +++|+++|+++++++.|+++++ +..++|+++++|
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdi-G~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 118 (223)
T 3duw_A 41 DVSPTQGKFLQLLVQIQGARNILEI-GTLGGYSTIWLARGLSS-GGRVVTLEASEKHADIARSNIERANLNDRVEVRTGL 118 (223)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEE-CCTTSHHHHHHHTTCCS-SCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred ccCHHHHHHHHHHHHhhCCCEEEEe-cCCccHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 3679999999999988899999999 99999999999998853 6899999999999999999998 667789999999
Q ss_pred hHHHhhhcc----CCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc----------------e-----ec
Q 041509 101 AQSLLLSHF----READFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS----------------W-----RS 155 (211)
Q Consensus 101 a~e~l~~l~----~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~----------------~-----~~ 155 (211)
+.+.++.+. ++||+||+|+....+..+++.+.++|+||| ++++||+++++. + .+
T Consensus 119 ~~~~~~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG-~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 197 (223)
T 3duw_A 119 ALDSLQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGT-VIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAE 197 (223)
T ss_dssp HHHHHHHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTC-EEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCc-EEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhC
Confidence 998876542 679999999999999999999999999977 555699887641 1 16
Q ss_pred CCCcEEEeec-----CCcEEEEEEe
Q 041509 156 SGSKSQLLPI-----GEGLLVTRIA 175 (211)
Q Consensus 156 ~~~~~v~lpi-----g~Gl~v~~~~ 175 (211)
++++++++|+ +||+.+++++
T Consensus 198 ~~~~~~~~p~~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 198 PRVSATALQTVGSKGYDGFIMAVVK 222 (223)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCeEEEEEeccCCCCCCeeEEEEEe
Confidence 8899999999 9999999875
No 9
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.93 E-value=3.1e-25 Score=184.21 Aligned_cols=150 Identities=18% Similarity=0.248 Sum_probs=131.7
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.+.|..+++|..++...++++|||+ |||+|+++++++.++++ +++|+++|+++++++.|+++++ +..++|+++.+|
T Consensus 55 ~~~~~~~~~l~~l~~~~~~~~vLdi-G~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d 132 (232)
T 3cbg_A 55 QISPEQAQFLGLLISLTGAKQVLEI-GVFRGYSALAMALQLPP-DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGP 132 (232)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEEE-CCTTSHHHHHHHTTSCT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC
T ss_pred CcCHHHHHHHHHHHHhcCCCEEEEe-cCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 5789999999999988899999999 99999999999998864 7899999999999999999997 666789999999
Q ss_pred hHHHhhhc---c--CCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc----------------e-----e
Q 041509 101 AQSLLLSH---F--READFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS----------------W-----R 154 (211)
Q Consensus 101 a~e~l~~l---~--~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~----------------~-----~ 154 (211)
+.+.++.+ . ++||+||+|+.+.+|..+++.+.++|+|||. +++||++++|. + .
T Consensus 133 ~~~~l~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~-lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 211 (232)
T 3cbg_A 133 ALATLEQLTQGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGL-MVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQ 211 (232)
T ss_dssp HHHHHHHHHTSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEE-EEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeE-EEEeCCCcCCccCCcccCChHHHHHHHHHHHHhh
Confidence 99887655 2 7899999999999999999999999999665 55698887541 1 1
Q ss_pred cCCCcEEEeecCCcEEEEEEe
Q 041509 155 SSGSKSQLLPIGEGLLVTRIA 175 (211)
Q Consensus 155 ~~~~~~v~lpig~Gl~v~~~~ 175 (211)
+++++++++|++||+++++|+
T Consensus 212 ~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 212 DERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp CTTEEEEEECSBTCEEEEEEC
T ss_pred CCCeEEEEEEcCCeEEEEEeC
Confidence 688999999999999999874
No 10
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.93 E-value=6.5e-25 Score=180.19 Aligned_cols=151 Identities=20% Similarity=0.235 Sum_probs=131.9
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEc
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIG 99 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~g 99 (211)
..+.+..+++|..++...++++|||+ |||+|+++++++++++. +++|+++|+++++++.|+++++ +..++++++.+
T Consensus 51 ~~~~~~~~~~l~~l~~~~~~~~vLdi-G~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~ 128 (229)
T 2avd_A 51 SMMTCEQAQLLANLARLIQAKKALDL-GTFTGYSALALALALPA-DGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK 128 (229)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEE-CCTTSHHHHHHHTTSCT-TCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEE-cCCccHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc
Confidence 46888999999999999999999999 99999999999998753 6899999999999999999997 66689999999
Q ss_pred chHHHhhhcc-----CCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc----------------e-----
Q 041509 100 DAQSLLLSHF-----READFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS----------------W----- 153 (211)
Q Consensus 100 da~e~l~~l~-----~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~----------------~----- 153 (211)
|+.+.++.+. ++||+||+|+.+..|..+++.+.++|+|||. ++++|+++++. +
T Consensus 129 d~~~~~~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~-lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 207 (229)
T 2avd_A 129 PALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGI-LAVLRVLWRGKVLQPPKGDVAAECVRNLNERIR 207 (229)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEE-EEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeE-EEEECCCcCCcccCcccCChHHHHHHHHHHHHh
Confidence 9998876542 7899999999999999999999999999665 55588876541 1
Q ss_pred ecCCCcEEEeecCCcEEEEEEe
Q 041509 154 RSSGSKSQLLPIGEGLLVTRIA 175 (211)
Q Consensus 154 ~~~~~~~v~lpig~Gl~v~~~~ 175 (211)
.+++++++++|++||+.+++|.
T Consensus 208 ~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 208 RDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp HCTTEEEEEECSTTCEEEEEEC
T ss_pred hCCCEEEEEEecCCceEEEEEC
Confidence 1688999999999999999874
No 11
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.93 E-value=1.6e-24 Score=177.90 Aligned_cols=154 Identities=13% Similarity=0.139 Sum_probs=131.6
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEc
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIG 99 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~g 99 (211)
..+.+..+++|..++...++++|||+ |||+|++|+++|+++++ +++|++||+++++++.|+++++ ++.++|++++|
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdi-G~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 117 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLEL-GAYCGYSAVRMARLLQP-GARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG 117 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEE-CCTTSHHHHHHHTTSCT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEE-CCCCCHHHHHHHHhCCC-CCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC
Confidence 46889999999999999899999999 99999999999998754 7899999999999999999998 66778999999
Q ss_pred chHHHhhhcc-----CCccEEEEcCCcCcHHHHHHHHH--hcCCCCcEEEEEecCCCCCc--e-----ecCCCcEEEee-
Q 041509 100 DAQSLLLSHF-----READFVLIDCNLENHEGVLRAVQ--AGNKPNGAVVVGYNAFRKGS--W-----RSSGSKSQLLP- 164 (211)
Q Consensus 100 da~e~l~~l~-----~~fD~VfiD~~~~~y~~~l~~~~--~~L~pgG~viv~dn~~~~~~--~-----~~~~~~~v~lp- 164 (211)
|+.+.++.+. ++||+||+|+....|...++.+. ++|+|||.+ +++|+..++. + .+++|+++.+|
T Consensus 118 d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~l-v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 196 (221)
T 3u81_A 118 ASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVL-LADNVIVPGTPDFLAYVRGSSSFECTHYSS 196 (221)
T ss_dssp CHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEE-EESCCCCCCCHHHHHHHHHCTTEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhccccCCCeEE-EEeCCCCcchHHHHHHHhhCCCceEEEccc
Confidence 9999887664 68999999999888875444433 889997755 5598887762 1 26889999999
Q ss_pred ------cCCcEEEEEEeccC
Q 041509 165 ------IGEGLLVTRIAAAS 178 (211)
Q Consensus 165 ------ig~Gl~v~~~~~~~ 178 (211)
++||+.+++++...
T Consensus 197 ~~~~~~~~dG~~~~~~~g~~ 216 (221)
T 3u81_A 197 YLEYMKVVDGLEKAIYQGPS 216 (221)
T ss_dssp EETTTTEEEEEEEEEECCCC
T ss_pred ccccCCCCCceEEEEEeCCC
Confidence 89999999997654
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.92 E-value=2.8e-24 Score=174.84 Aligned_cols=150 Identities=23% Similarity=0.340 Sum_probs=130.7
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEc
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIG 99 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~g 99 (211)
..+.+..++++..++...++++|||+ |||+|++|++++..++. +++|+++|+++++++.|+++++ +..++++++++
T Consensus 38 p~~~~~~~~~l~~l~~~~~~~~vLdi-G~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 115 (210)
T 3c3p_A 38 PIVDRQTGRLLYLLARIKQPQLVVVP-GDGLGCASWWFARAISI-SSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG 115 (210)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSEEEEE-SCGGGHHHHHHHTTSCT-TCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEE-cCCccHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe
Confidence 46888999999998888889999999 99999999999998753 7899999999999999999997 66678999999
Q ss_pred chHHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc---------------e-----ecCCCc
Q 041509 100 DAQSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS---------------W-----RSSGSK 159 (211)
Q Consensus 100 da~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~---------------~-----~~~~~~ 159 (211)
|+.+.++.+.+ ||+||+|+...++..+++.+.++|+|||.+ +++|+++.+. + .++++.
T Consensus 116 d~~~~~~~~~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~l-v~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 193 (210)
T 3c3p_A 116 DPLGIAAGQRD-IDILFMDCDVFNGADVLERMNRCLAKNALL-IAVNALRRGSVAESHEDPETAALREFNHHLSRRRDFF 193 (210)
T ss_dssp CHHHHHTTCCS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEE-EEESSSSCC------------CCCHHHHHHTTCTTEE
T ss_pred cHHHHhccCCC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEE-EEECccccCcccCcccchHHHHHHHHHHHHhhCCCeE
Confidence 99998776566 999999999999999999999999997655 5588776531 1 257889
Q ss_pred EEEeecCCcEEEEEEe
Q 041509 160 SQLLPIGEGLLVTRIA 175 (211)
Q Consensus 160 ~v~lpig~Gl~v~~~~ 175 (211)
++++|+++|+.+++|+
T Consensus 194 ~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 194 TTIVPVGNGVLLGYRL 209 (210)
T ss_dssp EEEECSTTCEEEEEEC
T ss_pred EEEEecCCceEEEEeC
Confidence 9999999999999986
No 13
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.91 E-value=3e-23 Score=172.24 Aligned_cols=152 Identities=20% Similarity=0.297 Sum_probs=131.5
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.+.|..++++..++...++++|||+ |||+|+++++++..+++ +++|+++|+++++++.|+++++ +..++++++.+|
T Consensus 43 ~~~~~~~~~l~~l~~~~~~~~VLdi-G~G~G~~~~~la~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d 120 (239)
T 2hnk_A 43 QISPEEGQFLNILTKISGAKRIIEI-GTFTGYSSLCFASALPE-DGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGS 120 (239)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEE-CCTTCHHHHHHHHHSCT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred ccCHHHHHHHHHHHHhhCcCEEEEE-eCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC
Confidence 6889999999999988899999999 99999999999998753 6899999999999999999997 555679999999
Q ss_pred hHHHhhhc---------------c-CCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc------------
Q 041509 101 AQSLLLSH---------------F-READFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS------------ 152 (211)
Q Consensus 101 a~e~l~~l---------------~-~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~------------ 152 (211)
+.+.++.+ . ++||+||+|+....+.++++.+.++|+|||.++ ++|++++|.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv-~~~~~~~g~~~~~~~~~~~~~ 199 (239)
T 2hnk_A 121 ALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLI-ADNVLWDGSVADLSHQEPSTV 199 (239)
T ss_dssp HHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEE-EECSSGGGGGGCTTCCCHHHH
T ss_pred HHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEE-EEccccCCcccCccccchHHH
Confidence 99876644 2 789999999999999999999999999976555 588776541
Q ss_pred ----e-----ecCCCcEEEeecCCcEEEEEEecc
Q 041509 153 ----W-----RSSGSKSQLLPIGEGLLVTRIAAA 177 (211)
Q Consensus 153 ----~-----~~~~~~~v~lpig~Gl~v~~~~~~ 177 (211)
+ .++++.++++|+++|+.+++|+-.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~ 233 (239)
T 2hnk_A 200 GIRKFNELVYNDSLVDVSLVPIADGVSLVRKRLE 233 (239)
T ss_dssp HHHHHHHHHHHCTTEEEEEECSTTCEEEEEECCC
T ss_pred HHHHHHHHHhhCCCeEEEEEEcCCceEeeeehhh
Confidence 1 168899999999999999998653
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.89 E-value=1.8e-22 Score=166.61 Aligned_cols=152 Identities=16% Similarity=0.221 Sum_probs=129.2
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEc
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIG 99 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~g 99 (211)
..+++..++++..++...++++|||+ |||+|++++++++..+ +++|+++|+++++++.|+++++ +..++|+++.+
T Consensus 36 ~~~~~~~~~~l~~~~~~~~~~~vLdi-G~G~G~~~~~la~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 112 (233)
T 2gpy_A 36 PIMDLLGMESLLHLLKMAAPARILEI-GTAIGYSAIRMAQALP--EATIVSIERDERRYEEAHKHVKALGLESRIELLFG 112 (233)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSEEEEE-CCTTSHHHHHHHHHCT--TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred CCcCHHHHHHHHHHHhccCCCEEEEe-cCCCcHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 46889999999999888899999999 9999999999999874 6899999999999999999998 55678999999
Q ss_pred chHHHhhhc--cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCc----------e--------------
Q 041509 100 DAQSLLLSH--FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGS----------W-------------- 153 (211)
Q Consensus 100 da~e~l~~l--~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~----------~-------------- 153 (211)
|+.+.++.. .++||+||+|+....+.++++.+.+.|+|||.+++ +|+++.+. +
T Consensus 113 d~~~~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (233)
T 2gpy_A 113 DALQLGEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILS-DNVLFRGLVAETDIEHKRHKQLATKIDTYNQWL 191 (233)
T ss_dssp CGGGSHHHHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEE-ETTTC-------------------------CTT
T ss_pred CHHHHHHhcccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEE-EcCCcCCccCCccccccchhHHHHHHHHHHHHH
Confidence 999877655 57999999999988999999999999999776655 77665441 0
Q ss_pred -ecCCCcEEEeecCCcEEEEEEecc
Q 041509 154 -RSSGSKSQLLPIGEGLLVTRIAAA 177 (211)
Q Consensus 154 -~~~~~~~v~lpig~Gl~v~~~~~~ 177 (211)
.++++.++++|+++|+.+++++..
T Consensus 192 ~~~~~~~~~~~p~~dG~~~~~~~~~ 216 (233)
T 2gpy_A 192 LEHPQYDTRIFPVGDGIAISIKRET 216 (233)
T ss_dssp TTCTTEEEEEECSTTCEEEEEEC--
T ss_pred HhCCCeEEEEEEcCCeEEEEEEcCC
Confidence 147788999999999999998764
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.86 E-value=1e-21 Score=161.17 Aligned_cols=121 Identities=17% Similarity=0.127 Sum_probs=98.8
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CC--CCcEEEE
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LD--ASHVEFV 97 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~--~~~V~~~ 97 (211)
.++++.+++||... ..++++|||+ || ||||+|+|+. . +|+|+|||.|++.++.|+++++ ++ .++|+++
T Consensus 14 ~~v~~~~~~~L~~~--l~~a~~VLEi-Gt--GySTl~lA~~--~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~ 85 (202)
T 3cvo_A 14 LTMPPAEAEALRMA--YEEAEVILEY-GS--GGSTVVAAEL--P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIV 85 (202)
T ss_dssp CCSCHHHHHHHHHH--HHHCSEEEEE-SC--SHHHHHHHTS--T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEE
T ss_pred ccCCHHHHHHHHHH--hhCCCEEEEE-Cc--hHHHHHHHHc--C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEE
Confidence 46889999999884 4578999999 98 6999999983 2 7999999999999999999998 66 7899999
Q ss_pred EcchHHH--------------hhh-------cc--CCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCCCce
Q 041509 98 IGDAQSL--------------LLS-------HF--READFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRKGSW 153 (211)
Q Consensus 98 ~gda~e~--------------l~~-------l~--~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~~~ 153 (211)
+||+.+. ++. +. ++||+||+|++++ ..++..+.++|+||| ++++||++.+..|
T Consensus 86 ~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~GG-~Iv~DNv~~r~~y 161 (202)
T 3cvo_A 86 WTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR--VGCALATAFSITRPV-TLLFDDYSQRRWQ 161 (202)
T ss_dssp ECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH--HHHHHHHHHHCSSCE-EEEETTGGGCSSG
T ss_pred EeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc--hhHHHHHHHhcCCCe-EEEEeCCcCCcch
Confidence 9997654 221 22 7899999999876 367777889999965 5577997765533
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.76 E-value=1.3e-18 Score=149.31 Aligned_cols=150 Identities=11% Similarity=-0.009 Sum_probs=116.4
Q ss_pred CCChhHHHHHHHHHhh----CCCCeEEEEccccHHHHHHHHHHHccC---CCcEEEEEeCCh------------------
Q 041509 23 AKEPNEAEFISALAAG----NNAQLMVVACANVANATTLALAAAAHQ---TGGRVVCILRRV------------------ 77 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~----~~~~~VLEi~Gtg~G~stl~la~a~~~---~~g~v~tiE~~~------------------ 77 (211)
++.++.+.+|..+++. ..|+.|||+ ||+.|+|++++|.+++. ++++|+++|..+
T Consensus 85 mv~~~r~~~L~~l~~~v~~~~~pg~IlEi-Gv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~ 163 (282)
T 2wk1_A 85 MIGIKRLENIRQCVEDVIGNNVPGDLVET-GVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMAL 163 (282)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCCEEEEE-CCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCG
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCCcEEEe-ecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccc
Confidence 3556677777777654 558999999 99999999999998853 368999999642
Q ss_pred --------hHHHHHHHHhc--CC-CCcEEEEEcchHHHhhhc-cCCccEEEEcCCcC-cHHHHHHHHHhcCCCCcEEEEE
Q 041509 78 --------EEYKLSKKILG--LD-ASHVEFVIGDAQSLLLSH-FREADFVLIDCNLE-NHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 78 --------~~~~~Ar~~~~--~~-~~~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~-~y~~~l~~~~~~L~pgG~viv~ 144 (211)
...+.|++|++ ++ .++|+++.||+.+.++.+ .++|||||+|+++. .|.++++.+.++|+| |+++++
T Consensus 164 ~~~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~p-GGiIv~ 242 (282)
T 2wk1_A 164 HRRNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSV-GGYVIV 242 (282)
T ss_dssp GGGHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEE-EEEEEE
T ss_pred ccccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCC-CEEEEE
Confidence 14678999998 66 489999999999999876 47899999999983 578899999999998 557778
Q ss_pred ecCCC-CC---cee----cCCCcEEEeecCCcEEEEEE
Q 041509 145 YNAFR-KG---SWR----SSGSKSQLLPIGEGLLVTRI 174 (211)
Q Consensus 145 dn~~~-~~---~~~----~~~~~~v~lpig~Gl~v~~~ 174 (211)
||..+ +| .|. ..++...++++..+...-+|
T Consensus 243 DD~~~~~G~~~Av~Ef~~~~~i~~~i~~~~~~~v~~rk 280 (282)
T 2wk1_A 243 DDYMMCPPCKDAVDEYRAKFDIADELITIDRDGVYWQR 280 (282)
T ss_dssp SSCTTCHHHHHHHHHHHHHTTCCSCCEECSSSCEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHhcCCceEEEEecCEEEEEEe
Confidence 99864 44 121 45666777788765544443
No 17
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.72 E-value=1.3e-17 Score=138.96 Aligned_cols=115 Identities=10% Similarity=0.114 Sum_probs=96.7
Q ss_pred CC-hhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHH---ccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEc
Q 041509 24 KE-PNEAEFISALAAGNNAQLMVVACANVANATTLALAAA---AHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIG 99 (211)
Q Consensus 24 ~~-~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a---~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~g 99 (211)
.. |+++.++..++...++++|||| |||+|++|++|++. +. ++++|++||+++++++.|+. ...+|++++|
T Consensus 64 ~~~p~~~~~l~~~l~~~~~~~VLDi-G~GtG~~t~~la~~~~~~~-~~~~V~gvD~s~~~l~~a~~----~~~~v~~~~g 137 (236)
T 2bm8_A 64 LKDPDTQAVYHDMLWELRPRTIVEL-GVYNGGSLAWFRDLTKIMG-IDCQVIGIDRDLSRCQIPAS----DMENITLHQG 137 (236)
T ss_dssp CSCHHHHHHHHHHHHHHCCSEEEEE-CCTTSHHHHHHHHHHHHTT-CCCEEEEEESCCTTCCCCGG----GCTTEEEEEC
T ss_pred cCCHHHHHHHHHHHHhcCCCEEEEE-eCCCCHHHHHHHHhhhhcC-CCCEEEEEeCChHHHHHHhc----cCCceEEEEC
Confidence 44 8888888888877788999999 99999999999987 33 37899999999999988872 2468999999
Q ss_pred chHHH--hhhccC-CccEEEEcCCcCcHHHHHHHHHh-cCCCCcEEEEE
Q 041509 100 DAQSL--LLSHFR-EADFVLIDCNLENHEGVLRAVQA-GNKPNGAVVVG 144 (211)
Q Consensus 100 da~e~--l~~l~~-~fD~VfiD~~~~~y~~~l~~~~~-~L~pgG~viv~ 144 (211)
|+.+. ++.+.+ +||+|++|+.+.++.+.++++.+ .|+|||.+++.
T Consensus 138 D~~~~~~l~~~~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 138 DCSDLTTFEHLREMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp CSSCSGGGGGGSSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred cchhHHHHHhhccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEE
Confidence 99875 454444 79999999988889999999996 99998877763
No 18
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.68 E-value=1.8e-15 Score=120.61 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=88.2
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc-cCCccEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH-FREADFV 115 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l-~~~fD~V 115 (211)
.++++|||+ |||+|..+++++.. ...+|+++|+++++++.|++|++ +. ++++++++|+.+.++.+ .++||+|
T Consensus 43 ~~~~~vLDl-gcG~G~~~~~~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDL-YAGSGALGLEALSR---GAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEE-TCTTCHHHHHHHHT---TCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEe-CCCcCHHHHHHHHC---CCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEE
Confidence 577899999 99999999987763 25799999999999999999998 54 78999999999987654 6799999
Q ss_pred EEcCCcC----cHHHHHHHHHh--cCCCCcEEEEEecC
Q 041509 116 LIDCNLE----NHEGVLRAVQA--GNKPNGAVVVGYNA 147 (211)
Q Consensus 116 fiD~~~~----~y~~~l~~~~~--~L~pgG~viv~dn~ 147 (211)
++|.... .+.+.++.+.+ +|+|||.+++.++.
T Consensus 118 ~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 118 LADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 9997644 36788999988 99999988886643
No 19
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.67 E-value=1.1e-15 Score=123.16 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=98.9
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcch
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDA 101 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda 101 (211)
..++....+...+...++.+|||+ |||+|+.++.++...+ .++|+++|+++++++.|+++++ +. ++++++.+|+
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDi-G~G~G~~~~~la~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~ 99 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDI-GAGSASVSIEASNLMP--NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFA 99 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEE-TCTTCHHHHHHHHHCT--TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEE-CCCCCHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCCh
Confidence 444454555555567778899999 9999999999998853 6899999999999999999997 54 7899999999
Q ss_pred HHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 102 QSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 102 ~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.+.++. .++||+||++....++.+.++.+.+.|+|||.+++..
T Consensus 100 ~~~~~~-~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 100 PEGLDD-LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp TTTCTT-SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred hhhhhc-CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 877654 4789999999887789999999999999999888754
No 20
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.67 E-value=7.5e-16 Score=133.00 Aligned_cols=104 Identities=18% Similarity=0.157 Sum_probs=90.0
Q ss_pred HHHhhCCCCeEEEEccccHHH-HHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccC
Q 041509 34 ALAAGNNAQLMVVACANVANA-TTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFR 110 (211)
Q Consensus 34 ~l~~~~~~~~VLEi~Gtg~G~-stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~ 110 (211)
.++...++++|||| |||+|. +++.+|+. .+++|++||++|++++.||++++ ++ ++|+|++||+.+. + ++
T Consensus 116 ~la~l~~g~rVLDI-GcG~G~~ta~~lA~~---~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~--d~ 187 (298)
T 3fpf_A 116 ALGRFRRGERAVFI-GGGPLPLTGILLSHV---YGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D--GL 187 (298)
T ss_dssp HHTTCCTTCEEEEE-CCCSSCHHHHHHHHT---TCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G--GC
T ss_pred HHcCCCCcCEEEEE-CCCccHHHHHHHHHc---cCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C--CC
Confidence 46677889999999 999875 45556543 37899999999999999999997 76 8999999999885 4 58
Q ss_pred CccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 111 EADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 111 ~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+||+||+++..+++.+.++++.+.|+|||.+++.+
T Consensus 188 ~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 188 EFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 99999999888899999999999999999888754
No 21
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.65 E-value=2.8e-15 Score=121.88 Aligned_cols=114 Identities=16% Similarity=0.150 Sum_probs=94.0
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcch
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDA 101 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda 101 (211)
..+.....+...+...++.+|||+ |||+|+.++.+++. +++|+++|+++++++.|+++++ +..++++++.+|+
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~vLDl-GcG~G~~~~~la~~----~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 113 (204)
T 3njr_A 39 TKSPMRALTLAALAPRRGELLWDI-GGGSGSVSVEWCLA----GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA 113 (204)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEE-TCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT
T ss_pred CcHHHHHHHHHhcCCCCCCEEEEe-cCCCCHHHHHHHHc----CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch
Confidence 444555555555666778899999 99999999999875 6899999999999999999997 5555899999999
Q ss_pred HHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 102 QSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 102 ~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.+.++. .++||+||+++.. +.. +++.+.+.|+|||.+++..
T Consensus 114 ~~~~~~-~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 114 PAALAD-LPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp TGGGTT-SCCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEE
T ss_pred hhhccc-CCCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEe
Confidence 987664 4689999999854 455 9999999999999887744
No 22
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.64 E-value=2.6e-15 Score=117.46 Aligned_cols=114 Identities=12% Similarity=0.023 Sum_probs=92.1
Q ss_pred HHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHh
Q 041509 28 EAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLL 105 (211)
Q Consensus 28 ~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l 105 (211)
..+.+...+...++.+|||+ |||+|..++.++...+ +++|+++|+++++++.|+++++ +..+++ ++.+|+.+.+
T Consensus 13 ~~~~~~~~~~~~~~~~vldi-G~G~G~~~~~l~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~ 88 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDI-GGGSGSIAIEWLRSTP--QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAF 88 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEE-STTTTHHHHHHHTTSS--SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGG
T ss_pred HHHHHHHHhcccCCCeEEEe-CCCCCHHHHHHHHHCC--CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhh
Confidence 33444444456677799999 9999999999998763 6899999999999999999997 555589 9999998777
Q ss_pred hhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 106 LSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 106 ~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+...++||+|+++..... ...++.+.+.|+|||.+++.+.
T Consensus 89 ~~~~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 89 DDVPDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp GGCCSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEEC
T ss_pred hccCCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEee
Confidence 653489999999876654 7789999999999998887553
No 23
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.64 E-value=1.3e-15 Score=128.91 Aligned_cols=116 Identities=17% Similarity=0.275 Sum_probs=93.7
Q ss_pred HHHHHHHh--hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHh
Q 041509 30 EFISALAA--GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLL 105 (211)
Q Consensus 30 ~lL~~l~~--~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l 105 (211)
+++..++. ..+..+|||+ |||+|..++.|++....++.+|++||++++|++.||++++ +...+|+++++|+.+.
T Consensus 58 ~~i~~l~~~~~~~~~~vLDl-GcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~- 135 (261)
T 4gek_A 58 SMIGMLAERFVQPGTQVYDL-GCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI- 135 (261)
T ss_dssp HHHHHHHHHHCCTTCEEEEE-TCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC-
T ss_pred HHHHHHHHHhCCCCCEEEEE-eCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc-
Confidence 34444443 3467799999 9999999999999876667799999999999999999987 5567899999999875
Q ss_pred hhccCCccEEEEcCCc-----CcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 106 LSHFREADFVLIDCNL-----ENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 106 ~~l~~~fD~VfiD~~~-----~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
+ .++||+|++.... .+....++.+.+.|+|||.+++.+....
T Consensus 136 ~--~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 136 A--IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp C--CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred c--ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 3 4679999986532 2345789999999999999998876544
No 24
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.63 E-value=1.7e-15 Score=119.12 Aligned_cols=112 Identities=9% Similarity=0.019 Sum_probs=90.5
Q ss_pred HHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc
Q 041509 31 FISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 31 lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l 108 (211)
++..+....++++|||+ |||+|..++.++.. ...+|+++|+++++++.|+++++ ++.++++++.+|+.+.++..
T Consensus 22 ~~~~l~~~~~~~~vLDl-GcG~G~~~~~l~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (177)
T 2esr_A 22 IFNMIGPYFNGGRVLDL-FAGSGGLAIEAVSR---GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL 97 (177)
T ss_dssp HHHHHCSCCCSCEEEEE-TCTTCHHHHHHHHT---TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB
T ss_pred HHHHHHhhcCCCeEEEe-CCCCCHHHHHHHHc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh
Confidence 33333325577899999 99999999998875 25799999999999999999998 44568999999999977765
Q ss_pred cCCccEEEEcCCc--CcHHHHHHHHH--hcCCCCcEEEEEec
Q 041509 109 FREADFVLIDCNL--ENHEGVLRAVQ--AGNKPNGAVVVGYN 146 (211)
Q Consensus 109 ~~~fD~VfiD~~~--~~y~~~l~~~~--~~L~pgG~viv~dn 146 (211)
.++||+|++|... ..+.+.++.+. +.|+|||.+++..+
T Consensus 98 ~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 98 TGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred cCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 6789999999764 35567777877 88999888877554
No 25
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.62 E-value=2.8e-15 Score=124.59 Aligned_cols=129 Identities=26% Similarity=0.249 Sum_probs=106.9
Q ss_pred HHHHHHhhcCCcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--
Q 041509 11 KAYLKTLKMGQKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-- 88 (211)
Q Consensus 11 ~ay~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-- 88 (211)
..|...+......+.+.....+..++...++++|||+ |||+|..+++++..+.+ +++|+++|+++++++.|+++++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vldi-G~G~G~~~~~l~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~ 141 (255)
T 3mb5_A 64 VDYLDKMKRGPQIVHPKDAALIVAYAGISPGDFIVEA-GVGSGALTLFLANIVGP-EGRVVSYEIREDFAKLAWENIKWA 141 (255)
T ss_dssp HHHHHHSCCCSCCCCHHHHHHHHHHTTCCTTCEEEEE-CCTTSHHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHhhCccccccccHhHHHHHHHhhCCCCCCEEEEe-cCCchHHHHHHHHHhCC-CeEEEEEecCHHHHHHHHHHHHHc
Confidence 4555555555567788888888888888888999999 99999999999998643 7899999999999999999998
Q ss_pred CCCCcEEEEEcchHHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 89 LDASHVEFVIGDAQSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 89 ~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+..++++++.+|+.+.++ .++||+|++|.. +....++.+.+.|+|||.+++..
T Consensus 142 ~~~~~v~~~~~d~~~~~~--~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 142 GFDDRVTIKLKDIYEGIE--EENVDHVILDLP--QPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp TCTTTEEEECSCGGGCCC--CCSEEEEEECSS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCCceEEEECchhhccC--CCCcCEEEECCC--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 666779999999997644 568999999765 34567899999999988887754
No 26
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.62 E-value=3.1e-15 Score=121.16 Aligned_cols=105 Identities=13% Similarity=0.051 Sum_probs=86.3
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCC-CcEEEEEcchHHHhhhc-cCC-ccE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDA-SHVEFVIGDAQSLLLSH-FRE-ADF 114 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~-~~V~~~~gda~e~l~~l-~~~-fD~ 114 (211)
++.+|||+ |||+|..++.++... .++|+++|+++++++.|++|++ +.. ++++++.+|+.+.++.+ .++ ||+
T Consensus 53 ~~~~vLDl-GcGtG~~~~~~~~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDG-FAGSGSLGFEALSRQ---AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDV 128 (201)
T ss_dssp TTCEEEET-TCTTCHHHHHHHHTT---CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEE
T ss_pred CCCeEEEc-CCccCHHHHHHHHcc---CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCE
Confidence 67899999 999999999866542 4699999999999999999998 443 68999999999886643 468 999
Q ss_pred EEEcCC--cCcHHHHHHHH--HhcCCCCcEEEEEecCC
Q 041509 115 VLIDCN--LENHEGVLRAV--QAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 115 VfiD~~--~~~y~~~l~~~--~~~L~pgG~viv~dn~~ 148 (211)
|++|.. ...+.+.++.+ .++|+|||.+++..+..
T Consensus 129 I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 129 VFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 999987 34677888888 56799999888766543
No 27
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=1.4e-15 Score=126.39 Aligned_cols=102 Identities=10% Similarity=-0.078 Sum_probs=85.2
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVLI 117 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~Vfi 117 (211)
.++.+|||| |||+|+++.++++.. ..+||+||++|++++.|+++.+....+++++.+|+.+.+..+ +++||.|+.
T Consensus 59 ~~G~rVLdi-G~G~G~~~~~~~~~~---~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~ 134 (236)
T 3orh_A 59 SKGGRVLEV-GFGMAIAASKVQEAP---IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTCEEEEEE-CCTTSHHHHHHTTSC---EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred cCCCeEEEE-CCCccHHHHHHHHhC---CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEE
Confidence 467899999 999999999998653 468999999999999999998844568999999999987655 578999999
Q ss_pred cCCcC--------cHHHHHHHHHhcCCCCcEEEEE
Q 041509 118 DCNLE--------NHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 118 D~~~~--------~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|.... +...+++++.++|||||.++++
T Consensus 135 D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 96432 3577899999999998876653
No 28
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.61 E-value=4.4e-15 Score=120.36 Aligned_cols=103 Identities=13% Similarity=-0.010 Sum_probs=85.5
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
++++|||+ |||+|..+++++... ..+|+++|+++++++.|++|++ +. ++++++++|+.+.++...++||+||+
T Consensus 54 ~~~~vLDl-gcG~G~~~~~l~~~~---~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDC-FAGSGALGLEALSRY---AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEET-TCTTCHHHHHHHHTT---CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEe-CCCcCHHHHHHHhcC---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 67899999 899999999876542 3599999999999999999998 43 78999999999987654578999999
Q ss_pred cCC--cCcHHHHHHHHHh--cCCCCcEEEEEecC
Q 041509 118 DCN--LENHEGVLRAVQA--GNKPNGAVVVGYNA 147 (211)
Q Consensus 118 D~~--~~~y~~~l~~~~~--~L~pgG~viv~dn~ 147 (211)
|.. ...+.+.++.+.+ +|+|||.+++..+.
T Consensus 129 ~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 129 DPPFRRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 977 3467778888866 49998888776653
No 29
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.60 E-value=1.9e-15 Score=131.42 Aligned_cols=134 Identities=12% Similarity=0.132 Sum_probs=98.6
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC----C-CCcEEEEEcchHHHhhhccCCc
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL----D-ASHVEFVIGDAQSLLLSHFREA 112 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~----~-~~~V~~~~gda~e~l~~l~~~f 112 (211)
..++++|||| |||+|+++.++++.. +.++|++||+|+++++.|++++.. + ..+++++.+|+.+.++...++|
T Consensus 106 ~~~~~~VLdI-G~G~G~~~~~l~~~~--~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~f 182 (314)
T 2b2c_A 106 HPDPKRVLII-GGGDGGILREVLKHE--SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEF 182 (314)
T ss_dssp SSSCCEEEEE-SCTTSHHHHHHTTCT--TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCE
T ss_pred CCCCCEEEEE-cCCcCHHHHHHHHcC--CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCc
Confidence 4578999999 999999999998753 368999999999999999999862 2 5789999999999877556789
Q ss_pred cEEEEcCCc------CcH-HHHHHHHHhcCCCCcEEEEEec--CCCCC-c-----------eecCCCcEEEeec---CC-
Q 041509 113 DFVLIDCNL------ENH-EGVLRAVQAGNKPNGAVVVGYN--AFRKG-S-----------WRSSGSKSQLLPI---GE- 167 (211)
Q Consensus 113 D~VfiD~~~------~~y-~~~l~~~~~~L~pgG~viv~dn--~~~~~-~-----------~~~~~~~~v~lpi---g~- 167 (211)
|+|++|... ..| .++++.+.+.|+|||.+++ ++ .+... . +.+.++..+.+|. |+
T Consensus 183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~-~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~ 261 (314)
T 2b2c_A 183 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSS-QGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSM 261 (314)
T ss_dssp EEEEECCC-------------HHHHHHHHEEEEEEEEE-ECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEE
T ss_pred eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEE-ECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCce
Confidence 999999842 234 7899999999999776665 43 22111 0 1133445666776 45
Q ss_pred cEEEEEEe
Q 041509 168 GLLVTRIA 175 (211)
Q Consensus 168 Gl~v~~~~ 175 (211)
|+.++.+.
T Consensus 262 g~~~ask~ 269 (314)
T 2b2c_A 262 GYLICAKN 269 (314)
T ss_dssp EEEEEESS
T ss_pred EEEEEeCC
Confidence 77777665
No 30
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.60 E-value=4.2e-15 Score=117.63 Aligned_cols=102 Identities=10% Similarity=0.041 Sum_probs=83.2
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
.++.+|||+ |||+|+.+++++.. +++|+++|+++++++.|+++++ +. ++++++++++.+......++||+|+
T Consensus 21 ~~~~~vLDi-GcG~G~~~~~la~~----~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 21 DDESIVVDA-TMGNGNDTAFLAGL----SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp CTTCEEEES-CCTTSHHHHHHHTT----SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEE-cCCCCHHHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEE
Confidence 457899999 99999999999864 6899999999999999999998 55 7899999888765433367899999
Q ss_pred EcC-C-----------cCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 117 IDC-N-----------LENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 117 iD~-~-----------~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
.+. . .......++.+.+.|+|||.+++...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 883 1 12345678999999999998887653
No 31
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.60 E-value=7e-15 Score=115.90 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=86.2
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc---cCCcc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH---FREAD 113 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l---~~~fD 113 (211)
.++++|||+ |||+|..++.++.. ...+|+++|+++++++.|++++. +..++++++++|+.+.++.+ .++||
T Consensus 43 ~~~~~vLD~-GcG~G~~~~~~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDL-YSGSGGLAIEAVSR---GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp CSSCEEEET-TCTTCHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCCEEEe-CCccCHHHHHHHHc---CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCC
Confidence 467899999 99999999988762 25799999999999999999998 55578999999999876533 57899
Q ss_pred EEEEcCC--cCcHHHHHHHH--HhcCCCCcEEEEEec
Q 041509 114 FVLIDCN--LENHEGVLRAV--QAGNKPNGAVVVGYN 146 (211)
Q Consensus 114 ~VfiD~~--~~~y~~~l~~~--~~~L~pgG~viv~dn 146 (211)
+|++|.. .....+.++.+ .++|+|||.+++..+
T Consensus 119 ~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 119 LVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 9999976 24567777777 778999888877654
No 32
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.59 E-value=6e-15 Score=122.16 Aligned_cols=119 Identities=12% Similarity=0.037 Sum_probs=97.3
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEc
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIG 99 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~g 99 (211)
....+...+.+...+...++.+|||+ |||+|..+..++... +.+|+++|+++++++.|+++++ ++.++++++++
T Consensus 18 ~~~~~~~~~~l~~~~~~~~~~~VLDi-GcG~G~~~~~la~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~ 93 (256)
T 1nkv_A 18 NPFTEEKYATLGRVLRMKPGTRILDL-GSGSGEMLCTWARDH---GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN 93 (256)
T ss_dssp SSCCHHHHHHHHHHTCCCTTCEEEEE-TCTTCHHHHHHHHHT---CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEE-CCCCCHHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC
Confidence 34555666666566666778899999 999999999999875 5699999999999999999987 66678999999
Q ss_pred chHHHhhhccCCccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 100 DAQSLLLSHFREADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 100 da~e~l~~l~~~fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|+.+... .++||+|+..... .+....++.+.+.|+|||.+++.+.
T Consensus 94 d~~~~~~--~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 94 DAAGYVA--NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CCTTCCC--SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred ChHhCCc--CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 9987633 6899999975432 2568899999999999998888764
No 33
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.59 E-value=1.6e-14 Score=119.69 Aligned_cols=103 Identities=13% Similarity=0.013 Sum_probs=87.3
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhh--hccCCccE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLL--SHFREADF 114 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~--~l~~~fD~ 114 (211)
.++.+|||+ |||+|+.++.++... ++++|++||+++++++.|+++++ +. .+|+++++|+.+... ...++||+
T Consensus 69 ~~~~~vLDi-G~G~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDV-GAGAGFPSLPIKICF--PHLHVTIVDSLNKRITFLEKLSEALQL-ENTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEE-CSSSCTTHHHHHHHC--TTCEEEEEESCHHHHHHHHHHHHHHTC-SSEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEe-cCCCCHHHHHHHHhC--CCCEEEEEeCCHHHHHHHHHHHHHcCC-CCEEEEeccHHHhcccccccCCccE
Confidence 367899999 999999999999764 36899999999999999999988 54 469999999988642 12578999
Q ss_pred EEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 115 VLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 115 VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|+.++ ..++..+++.+.++|+|||.+++.+.
T Consensus 145 V~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 145 VTARA-VARLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp EEEEC-CSCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred EEEec-cCCHHHHHHHHHHhcCCCCEEEEEeC
Confidence 99988 46789999999999999998887654
No 34
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.59 E-value=3.9e-15 Score=118.97 Aligned_cols=106 Identities=16% Similarity=0.034 Sum_probs=89.0
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..+..+|||+ |||+|..++.++..+.+ .++|+++|+++++++.|+++++ +..++++++++|+.+......++||+|
T Consensus 20 ~~~~~~vLDl-GcG~G~~~~~l~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 20 VKEGDTVVDA-TCGNGNDTAFLASLVGE-NGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CCTTCEEEES-CCTTSHHHHHHHHHHCT-TCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEc-CCCCCHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEE
Confidence 4566899999 99999999999998743 5799999999999999999998 555789999999988754446899999
Q ss_pred EEcCCc------------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 116 LIDCNL------------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 116 fiD~~~------------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.+... ..+.++++.+.+.|+|||.+++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 988632 135679999999999999888765
No 35
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.58 E-value=3.2e-14 Score=111.84 Aligned_cols=117 Identities=22% Similarity=0.240 Sum_probs=97.4
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
...+...+++...+...++.+|||+ |||+|..+..++... .+|+++|.++++++.|++++. +..++++++.+|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldi-G~G~G~~~~~l~~~~----~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d 90 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDV-GCGTGGVTLELAGRV----RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGD 90 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEE-SCTTSHHHHHHHTTS----SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESC
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEE-CCCCCHHHHHHHHhc----CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecC
Confidence 3345556666666677788899999 999999999988653 799999999999999999997 545789999999
Q ss_pred hHHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 101 AQSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 101 a~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.+.++. .++||+|+++....+....++.+.+.|+|||.+++.+
T Consensus 91 ~~~~~~~-~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 91 APEALCK-IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp HHHHHTT-SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHhccc-CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9886553 3689999999877788999999999999988877754
No 36
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.57 E-value=1.4e-14 Score=119.99 Aligned_cols=112 Identities=15% Similarity=0.057 Sum_probs=91.4
Q ss_pred HHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhh
Q 041509 30 EFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLS 107 (211)
Q Consensus 30 ~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~ 107 (211)
.++..+....++.+|||+ |||+|..+..++... .++|+++|+++.+++.|++++. +..++++++++|+.+. +.
T Consensus 36 ~~l~~l~~~~~~~~vLDi-G~G~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~ 110 (257)
T 3f4k_A 36 KAVSFINELTDDAKIADI-GCGTGGQTLFLADYV---KGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-PF 110 (257)
T ss_dssp HHHTTSCCCCTTCEEEEE-TCTTSHHHHHHHHHC---CSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-SS
T ss_pred HHHHHHhcCCCCCeEEEe-CCCCCHHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-CC
Confidence 344444445567799999 999999999999876 3499999999999999999997 6677899999999654 32
Q ss_pred ccCCccEEEEcCCcC--cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 108 HFREADFVLIDCNLE--NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 108 l~~~fD~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
..++||+|+...... +..+.++.+.+.|+|||.+++.+.
T Consensus 111 ~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 111 QNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp CTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 257999999875433 578899999999999998888763
No 37
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.57 E-value=1.4e-14 Score=116.77 Aligned_cols=115 Identities=15% Similarity=0.069 Sum_probs=93.1
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchH
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQ 102 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~ 102 (211)
..|.....+...+...++.+|||+ |||+|+.+..++.. +++|+++|+++++++.|+++++ ....+++++.+|+.
T Consensus 61 ~~~~~~~~~~~~l~~~~~~~vLdi-G~G~G~~~~~la~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 135 (210)
T 3lbf_A 61 SQPYMVARMTELLELTPQSRVLEI-GTGSGYQTAILAHL----VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGW 135 (210)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEE-CCTTSHHHHHHHHH----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEE-cCCCCHHHHHHHHh----CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcc
Confidence 356666666666677788999999 99999999999986 5899999999999999999998 22347999999998
Q ss_pred HHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecC
Q 041509 103 SLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
+..+. .++||+|+++.....+. +.+.+.|+|||.+++....
T Consensus 136 ~~~~~-~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 136 QGWQA-RAPFDAIIVTAAPPEIP---TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GCCGG-GCCEEEEEESSBCSSCC---THHHHTEEEEEEEEEEECS
T ss_pred cCCcc-CCCccEEEEccchhhhh---HHHHHhcccCcEEEEEEcC
Confidence 86553 68999999997665443 3567889999888775543
No 38
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.56 E-value=4.2e-14 Score=114.69 Aligned_cols=119 Identities=11% Similarity=0.032 Sum_probs=94.3
Q ss_pred ChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCC----cEEEEE
Q 041509 25 EPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDAS----HVEFVI 98 (211)
Q Consensus 25 ~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~----~V~~~~ 98 (211)
.+...+++..++...++.+|||+ |||+|..+.++++..+ ..+|+++|+++++++.|++++. ++.+ +++++.
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDi-GcG~G~~~~~l~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 90 (217)
T 3jwh_A 14 NQQRMNGVVAALKQSNARRVIDL-GCGQGNLLKILLKDSF--FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQ 90 (217)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEE-TCTTCHHHHHHHHCTT--CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-CCCCCHHHHHHHhhCC--CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEe
Confidence 34555666666777788999999 9999999999987542 4799999999999999999987 4333 899999
Q ss_pred cchHHHhhhccCCccEEEEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEecC
Q 041509 99 GDAQSLLLSHFREADFVLIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 99 gda~e~l~~l~~~fD~VfiD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
+|+... +...++||+|+...... .+..+++.+.+.|+|||.+++.+|.
T Consensus 91 ~d~~~~-~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 91 GALTYQ-DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp CCTTSC-CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBH
T ss_pred CCcccc-cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCc
Confidence 998543 32257999999876432 4578999999999999987777663
No 39
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.56 E-value=1.2e-14 Score=121.88 Aligned_cols=113 Identities=12% Similarity=0.066 Sum_probs=94.8
Q ss_pred HHHHHHHHhhC-CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHh
Q 041509 29 AEFISALAAGN-NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLL 105 (211)
Q Consensus 29 ~~lL~~l~~~~-~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l 105 (211)
+.+|..++... ++++|||+ |||+|..++.++... .++|+++|+++++++.|++|+. ++.++++++++|+.+..
T Consensus 37 ~~ll~~~~~~~~~~~~vLDl-G~G~G~~~~~la~~~---~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~ 112 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDL-CSGNGIIPLLLSTRT---KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT 112 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEET-TCTTTHHHHHHHTTC---CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG
T ss_pred HHHHHHHhcCCCCCCEEEEc-CCchhHHHHHHHHhc---CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh
Confidence 66788888777 78999999 999999999998763 3499999999999999999998 66778999999999886
Q ss_pred hhc-cCCccEEEEcCCc-----------------------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 106 LSH-FREADFVLIDCNL-----------------------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 106 ~~l-~~~fD~VfiD~~~-----------------------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
..+ .++||+|+.|.+- ..+.++++.+.++|+|||.++++.
T Consensus 113 ~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 113 DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp GTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 533 5799999997432 124678999999999999888854
No 40
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.56 E-value=1.8e-14 Score=125.22 Aligned_cols=132 Identities=20% Similarity=0.178 Sum_probs=101.2
Q ss_pred HHHHHHHhhcCCcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-
Q 041509 10 TKAYLKTLKMGQKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG- 88 (211)
Q Consensus 10 ~~ay~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~- 88 (211)
...|...+..+.....|.....+...+...++.+|||+ |||+|+.++.++....+ .++|+++|+++++++.|++++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~VLDi-G~G~G~~~~~la~~~g~-~~~v~~vD~~~~~~~~a~~~~~~ 152 (336)
T 2b25_A 75 LEDYVVLMKRGTAITFPKDINMILSMMDINPGDTVLEA-GSGSGGMSLFLSKAVGS-QGRVISFEVRKDHHDLAKKNYKH 152 (336)
T ss_dssp HHHHHHHSCCSSCCCCHHHHHHHHHHHTCCTTCEEEEE-CCTTSHHHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHhhhhcCCCcccCHHHHHHHHHhcCCCCCCEEEEe-CCCcCHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHH
Confidence 34555556656667788866666666677788999999 99999999999987643 5899999999999999999986
Q ss_pred -C----------CCCcEEEEEcchHHHhhhc-cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 89 -L----------DASHVEFVIGDAQSLLLSH-FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 89 -~----------~~~~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+ ...+++++.+|+.+.+..+ .++||+||+|... ....++.+.+.|+|||.+++..
T Consensus 153 ~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~--~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 153 WRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLN--PHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp HHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSSS--TTTTHHHHGGGEEEEEEEEEEE
T ss_pred hhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCCC--HHHHHHHHHHhcCCCcEEEEEe
Confidence 2 2468999999998864333 4589999998653 3347889999999988887654
No 41
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.56 E-value=1.2e-14 Score=122.77 Aligned_cols=132 Identities=16% Similarity=0.138 Sum_probs=105.1
Q ss_pred HHHHHHHHhhcCCcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc
Q 041509 9 ATKAYLKTLKMGQKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG 88 (211)
Q Consensus 9 ~~~ay~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~ 88 (211)
....|.+.+......+.|.....+...+...++.+|||+ |||+|..++.++..+.+ +++|+++|+++++++.|+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~VLDi-G~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~ 158 (277)
T 1o54_A 81 SLIDEIMNMKRRTQIVYPKDSSFIAMMLDVKEGDRIIDT-GVGSGAMCAVLARAVGS-SGKVFAYEKREEFAKLAESNLT 158 (277)
T ss_dssp CHHHHHHTCCC-CCCCCHHHHHHHHHHTTCCTTCEEEEE-CCTTSHHHHHHHHHTTT-TCEEEEECCCHHHHHHHHHHHH
T ss_pred CHHHHHhhccccCCccCHHHHHHHHHHhCCCCCCEEEEE-CCcCCHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHH
Confidence 344555555544456777777777777777788899999 99999999999988643 6899999999999999999997
Q ss_pred --CCCCcEEEEEcchHHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 89 --LDASHVEFVIGDAQSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 89 --~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+..++++++.+|+.+.++ .++||+|++|.. +..+.++.+.+.|+|||.+++...
T Consensus 159 ~~~~~~~v~~~~~d~~~~~~--~~~~D~V~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 159 KWGLIERVTIKVRDISEGFD--EKDVDALFLDVP--DPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp HTTCGGGEEEECCCGGGCCS--CCSEEEEEECCS--CGGGTHHHHHHHEEEEEEEEEEES
T ss_pred HcCCCCCEEEEECCHHHccc--CCccCEEEECCc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 545789999999988743 468999999764 345778888999999888887664
No 42
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.56 E-value=2.9e-14 Score=124.13 Aligned_cols=101 Identities=18% Similarity=0.149 Sum_probs=85.4
Q ss_pred CCC--eEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhhc-cCCccEE
Q 041509 40 NAQ--LMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLSH-FREADFV 115 (211)
Q Consensus 40 ~~~--~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~l-~~~fD~V 115 (211)
+++ +|||| |||+|+++.++++..+ +.+|++||+|+++++.||+++. ....+++++++|+.+.+... .++||+|
T Consensus 87 ~p~~~rVLdI-G~G~G~la~~la~~~p--~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvI 163 (317)
T 3gjy_A 87 DASKLRITHL-GGGACTMARYFADVYP--QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVI 163 (317)
T ss_dssp CGGGCEEEEE-SCGGGHHHHHHHHHST--TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEE
T ss_pred CCCCCEEEEE-ECCcCHHHHHHHHHCC--CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEE
Confidence 445 99999 9999999999998764 5699999999999999999998 33578999999999998754 5789999
Q ss_pred EEcCCcCc-------HHHHHHHHHhcCCCCcEEEE
Q 041509 116 LIDCNLEN-------HEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 116 fiD~~~~~-------y~~~l~~~~~~L~pgG~viv 143 (211)
++|..... ..++++.+.+.|+|||.+++
T Consensus 164 i~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~ 198 (317)
T 3gjy_A 164 IRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVA 198 (317)
T ss_dssp EECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 99964321 27899999999999887665
No 43
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.55 E-value=3.1e-14 Score=116.31 Aligned_cols=115 Identities=10% Similarity=0.026 Sum_probs=89.3
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
+++...+++.......++++|||+ ||| +|..++.++... +++|+++|+++++++.|++|+. +. +++++++|
T Consensus 39 ~p~~~~~~l~~~~~~~~~~~vLDl-G~G~~G~~~~~la~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d 112 (230)
T 3evz_A 39 VTTPISRYIFLKTFLRGGEVALEI-GTGHTAMMALMAEKFF---NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSN 112 (230)
T ss_dssp CCCHHHHHHHHHTTCCSSCEEEEE-CCTTTCHHHHHHHHHH---CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECS
T ss_pred eCCCchhhhHhHhhcCCCCEEEEc-CCCHHHHHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCC
Confidence 344445655433344577899999 999 999999999875 5799999999999999999998 43 89999999
Q ss_pred hHHHhhhccCCccEEEEcCCc----------------------CcHHHHHHHHHhcCCCCcEEEEE
Q 041509 101 AQSLLLSHFREADFVLIDCNL----------------------ENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 101 a~e~l~~l~~~fD~VfiD~~~----------------------~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+....+...++||+|+.+.+. ..+.++++.+.++|+|||.+++.
T Consensus 113 ~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 113 GGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp SCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred chhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 753322224799999988432 12578999999999999888774
No 44
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.54 E-value=1.1e-14 Score=125.84 Aligned_cols=134 Identities=13% Similarity=0.143 Sum_probs=99.8
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc----CC-CCcEEEEEcchHHHhhhccCCc
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG----LD-ASHVEFVIGDAQSLLLSHFREA 112 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~----~~-~~~V~~~~gda~e~l~~l~~~f 112 (211)
..++++|||| |||+|+++.++++.. +..+|++||+|+++++.|++++. ++ ..+++++++|+.+.++...++|
T Consensus 93 ~~~~~~VLdi-G~G~G~~~~~l~~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 93 HPNPRKVLII-GGGDGGVLREVVKHP--SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SSSCCEEEEE-ECTTSHHHHHHTTCT--TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCCCEEEEE-CCCchHHHHHHHHcC--CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCc
Confidence 3578999999 999999999998753 25899999999999999999985 23 5789999999999887656799
Q ss_pred cEEEEcCCcC-------cHHHHHHHHHhcCCCCcEEEEEec-CCCCC-c------------eecCCCcEEEeec---C-C
Q 041509 113 DFVLIDCNLE-------NHEGVLRAVQAGNKPNGAVVVGYN-AFRKG-S------------WRSSGSKSQLLPI---G-E 167 (211)
Q Consensus 113 D~VfiD~~~~-------~y~~~l~~~~~~L~pgG~viv~dn-~~~~~-~------------~~~~~~~~v~lpi---g-~ 167 (211)
|+||+|.... .+.++++.+.+.|+|||.+++ ++ ..+.. . +.+.++..+.+|. | .
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~-~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~ 248 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCC-QGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQI 248 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEE-EEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEE-ecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcce
Confidence 9999998642 246789999999999776665 44 22221 1 1233444556776 3 3
Q ss_pred cEEEEEEe
Q 041509 168 GLLVTRIA 175 (211)
Q Consensus 168 Gl~v~~~~ 175 (211)
|+.++.+.
T Consensus 249 g~~~as~~ 256 (304)
T 2o07_A 249 GFMLCSKN 256 (304)
T ss_dssp EEEEEESS
T ss_pred EEEEEeCC
Confidence 77777654
No 45
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.54 E-value=2.1e-14 Score=118.33 Aligned_cols=103 Identities=10% Similarity=-0.071 Sum_probs=82.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVLI 117 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~Vfi 117 (211)
.+..+|||+ |||+|+.+..++... ..+|+++|+++++++.|+++.+....+++++++|+.+.++.+ +++||+|+.
T Consensus 59 ~~~~~vLDi-GcGtG~~~~~l~~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 59 SKGGRVLEV-GFGMAIAASKVQEAP---IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTCEEEEEE-CCTTSHHHHHHHTSC---EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCeEEEE-eccCCHHHHHHHhcC---CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEE
Confidence 456789999 999999999996532 359999999999999999998733478999999999875433 578999999
Q ss_pred cCCc--------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 118 DCNL--------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 118 D~~~--------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
|... ......++++.++|+|||.+++++
T Consensus 135 d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 5322 123467899999999988877654
No 46
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=1.8e-14 Score=122.22 Aligned_cols=118 Identities=15% Similarity=0.036 Sum_probs=96.6
Q ss_pred ChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHH
Q 041509 25 EPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQS 103 (211)
Q Consensus 25 ~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e 103 (211)
.+...+.+..+....+.++|||+ |||+|..++.+|...+ +++|+++|.++++++.|++|++ ...++++++++|+.+
T Consensus 104 ~~~~~e~~~~~~~~~~~~~VLDl-gcG~G~~s~~la~~~~--~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~ 180 (272)
T 3a27_A 104 QGNIEERKRMAFISNENEVVVDM-FAGIGYFTIPLAKYSK--PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRD 180 (272)
T ss_dssp GGGHHHHHHHHTSCCTTCEEEET-TCTTTTTHHHHHHHTC--CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGG
T ss_pred CCchHHHHHHHHhcCCCCEEEEe-cCcCCHHHHHHHHhCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHH
Confidence 34444555545555677899999 9999999999998753 5799999999999999999998 334579999999998
Q ss_pred HhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 104 LLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 104 ~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
. +. .++||+|++|... .+.+.++.+.+.|+|||.+++.++..
T Consensus 181 ~-~~-~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 181 V-EL-KDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp C-CC-TTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred c-Cc-cCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 7 54 6789999999876 67788999999999999888877654
No 47
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.54 E-value=4.7e-14 Score=119.62 Aligned_cols=126 Identities=11% Similarity=0.050 Sum_probs=100.5
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchH
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQ 102 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~ 102 (211)
++.....++..++...++.+|||+ |||+|..|+.+++.++. .++|+++|+++.+++.+++|++ ....+++++++|+.
T Consensus 67 ~qd~~s~l~~~~l~~~~g~~VLDl-gaG~G~~t~~la~~~~~-~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~ 144 (274)
T 3ajd_A 67 PQSISSMIPPIVLNPREDDFILDM-CAAPGGKTTHLAQLMKN-KGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMR 144 (274)
T ss_dssp ECCSGGGHHHHHHCCCTTCEEEET-TCTTCHHHHHHHHHTTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHH
T ss_pred EeCHHHHHHHHHhCCCCcCEEEEe-CCCccHHHHHHHHHcCC-CCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChH
Confidence 444455566666777788899999 79999999999987642 4899999999999999999998 22348999999998
Q ss_pred HHhhhc---cCCccEEEEcCCc---------------------CcHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 103 SLLLSH---FREADFVLIDCNL---------------------ENHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 103 e~l~~l---~~~fD~VfiD~~~---------------------~~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
+....+ .++||.|++|++- ..+.++++.+.+.|+|||.+++....+.+.
T Consensus 145 ~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ 217 (274)
T 3ajd_A 145 KYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVE 217 (274)
T ss_dssp HHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTT
T ss_pred hcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChH
Confidence 875432 5789999999432 245788999999999999988877666543
No 48
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.54 E-value=4e-14 Score=109.81 Aligned_cols=102 Identities=12% Similarity=0.002 Sum_probs=83.4
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc---cCCccE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH---FREADF 114 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l---~~~fD~ 114 (211)
++++|||+ |||+|..++.++.. +.+|+++|+++++++.|++++. +. +++++++|+.+.++.. .++||+
T Consensus 41 ~~~~vLD~-GcG~G~~~~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDP-FAGSGAVGLEAASE----GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEE-TCSSCHHHHHHHHT----TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEe-CCCcCHHHHHHHHC----CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEE
Confidence 67899999 99999999999875 3349999999999999999998 44 8999999999876543 238999
Q ss_pred EEEcCCc-CcHHHHHHHHH--hcCCCCcEEEEEecCC
Q 041509 115 VLIDCNL-ENHEGVLRAVQ--AGNKPNGAVVVGYNAF 148 (211)
Q Consensus 115 VfiD~~~-~~y~~~l~~~~--~~L~pgG~viv~dn~~ 148 (211)
|+++... ....+.++.+. +.|+|||.+++..+..
T Consensus 114 i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 114 AFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred EEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 9999644 45567777777 8999998887766543
No 49
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.54 E-value=2.8e-14 Score=119.43 Aligned_cols=104 Identities=15% Similarity=0.062 Sum_probs=87.8
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++.+|||+ |||+|..+..++.. ..++|+++|+++.+++.|+++++ +..++++++++|+.+. +...++||+|
T Consensus 44 ~~~~~~vLDi-GcG~G~~~~~la~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~i 118 (267)
T 3kkz_A 44 LTEKSLIADI-GCGTGGQTMVLAGH---VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL-PFRNEELDLI 118 (267)
T ss_dssp CCTTCEEEEE-TCTTCHHHHHHHTT---CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-CCCTTCEEEE
T ss_pred CCCCCEEEEe-CCCCCHHHHHHHhc---cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC-CCCCCCEEEE
Confidence 4567899999 99999999999876 25799999999999999999987 6668899999999764 3225799999
Q ss_pred EEcCCcC--cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCNLE--NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~~~--~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+...... +....++.+.+.|+|||.+++.+-
T Consensus 119 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 119 WSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp EESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9876433 568899999999999998888664
No 50
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.53 E-value=5.3e-14 Score=116.53 Aligned_cols=131 Identities=21% Similarity=0.182 Sum_probs=105.0
Q ss_pred HHHHHHHhhcCCcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-
Q 041509 10 TKAYLKTLKMGQKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG- 88 (211)
Q Consensus 10 ~~ay~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~- 88 (211)
...|...+......+.+.....+...+...++.+|||+ |||+|..++.++..+.+ +++|+++|.++++++.|+++++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdi-G~G~G~~~~~l~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~ 143 (258)
T 2pwy_A 66 LEEYLLHMKRSATPTYPKDASAMVTLLDLAPGMRVLEA-GTGSGGLTLFLARAVGE-KGLVESYEARPHHLAQAERNVRA 143 (258)
T ss_dssp HHHHHHHSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEE-CCTTSHHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHhhcCccccccccchHHHHHHHHcCCCCCCEEEEE-CCCcCHHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHH
Confidence 34566665555566777777766667777788899999 99999999999988643 6899999999999999999987
Q ss_pred C-CCCcEEEEEcchHHH-hhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 89 L-DASHVEFVIGDAQSL-LLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 89 ~-~~~~V~~~~gda~e~-l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
. ..++++++.+|+.+. ++ .++||+|++|.. +....++.+.+.|+|||.+++...
T Consensus 144 ~~g~~~v~~~~~d~~~~~~~--~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 144 FWQVENVRFHLGKLEEAELE--EAAYDGVALDLM--EPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp HCCCCCEEEEESCGGGCCCC--TTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred hcCCCCEEEEECchhhcCCC--CCCcCEEEECCc--CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 2 357899999999876 33 468999999764 445788899999999988887663
No 51
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.53 E-value=9.6e-14 Score=112.77 Aligned_cols=104 Identities=12% Similarity=0.009 Sum_probs=86.4
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc-cCCccEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH-FREADFV 115 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l-~~~fD~V 115 (211)
.+..+|||+ |||+|..++.++...+ +.++++||+++++++.|++++. ++ ++++++.+|+.+....+ .++||+|
T Consensus 40 ~~~~~vLDi-GcG~G~~~~~la~~~p--~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEV-GSGKGAFVSGMAKQNP--DINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEE-SCTTSHHHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEE-ccCcCHHHHHHHHHCC--CCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 456789999 9999999999998864 6899999999999999999997 54 78999999998743212 5689999
Q ss_pred EEcCCcC-----------cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCNLE-----------NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~~~-----------~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+++.... .+..+++.+.+.|+|||.+++..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 9986532 246899999999999998887653
No 52
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=3.8e-13 Score=105.01 Aligned_cols=112 Identities=14% Similarity=0.107 Sum_probs=93.1
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchH
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQ 102 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~ 102 (211)
..+...+.+...+...++.+|||+ |||+|..+..++. .+.+++++|+++++++.|+++++ ...++++++++|+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdi-G~G~G~~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~ 93 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDV-GCGSGGMTVEIAK----RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAE 93 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEE-SCCCSHHHHHHHT----TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHH
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEe-CCCCCHHHHHHHh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCcc
Confidence 345555666666666778899999 9999999999987 26899999999999999999998 22367999999999
Q ss_pred HHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 103 SLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.++ .++||+|+++.. .+..+.++.+.+. |||.+++.+
T Consensus 94 ~~~~--~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 94 DVLD--KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp HHGG--GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred cccc--CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEe
Confidence 8554 379999999988 7788999999987 889888866
No 53
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.53 E-value=3.3e-14 Score=117.05 Aligned_cols=104 Identities=12% Similarity=-0.006 Sum_probs=85.9
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhh-c-cCCccEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLS-H-FREADFVL 116 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~-l-~~~fD~Vf 116 (211)
+..+|||| |||+|.+++.+|...+ +..|++||+++++++.|+++++ ....+++++.+|+.+.++. + .++||.|+
T Consensus 34 ~~~~vLDi-GcG~G~~~~~lA~~~p--~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEI-GFGMGASLVAMAKDRP--EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEE-SCTTCHHHHHHHHHCT--TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEE-eeeChHHHHHHHHHCC--CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 66789999 9999999999998764 6899999999999999999987 3345799999999998764 2 67999999
Q ss_pred EcC---CcC--cH------HHHHHHHHhcCCCCcEEEEEec
Q 041509 117 IDC---NLE--NH------EGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 117 iD~---~~~--~y------~~~l~~~~~~L~pgG~viv~dn 146 (211)
+.. ... .. ..+++.+.+.|+|||.+++..|
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 862 211 11 3599999999999999888765
No 54
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.53 E-value=3.6e-14 Score=122.97 Aligned_cols=104 Identities=19% Similarity=0.143 Sum_probs=88.0
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc----C-C-CCcEEEEEcchHHHhhhccCC
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG----L-D-ASHVEFVIGDAQSLLLSHFRE 111 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~----~-~-~~~V~~~~gda~e~l~~l~~~ 111 (211)
..++++|||| |||+|..+.++++.. +..+|++||+|+++++.|++++. + + ..+++++++|+.+.++...++
T Consensus 75 ~~~~~~VLdi-G~G~G~~~~~l~~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~ 151 (314)
T 1uir_A 75 HPEPKRVLIV-GGGEGATLREVLKHP--TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEER 151 (314)
T ss_dssp SSCCCEEEEE-ECTTSHHHHHHTTST--TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCC
T ss_pred CCCCCeEEEE-cCCcCHHHHHHHhcC--CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCC
Confidence 4578999999 999999999998753 36799999999999999999985 1 2 468999999999987765789
Q ss_pred ccEEEEcCCcCc----------HHHHHHHHHhcCCCCcEEEEE
Q 041509 112 ADFVLIDCNLEN----------HEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 112 fD~VfiD~~~~~----------y~~~l~~~~~~L~pgG~viv~ 144 (211)
||+|++|..... ..++++.+.+.|+|||.+++.
T Consensus 152 fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred ccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 999999975543 578999999999998877764
No 55
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.53 E-value=4.5e-14 Score=118.53 Aligned_cols=102 Identities=11% Similarity=-0.044 Sum_probs=86.9
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhh--ccCCccEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLS--HFREADFV 115 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~--l~~~fD~V 115 (211)
++.+|||+ |||+|+.++.+|...+ +++|++||+++++++.|++|++ ++ .+|+++++|+.+.... ..++||+|
T Consensus 80 ~~~~vLDi-G~G~G~~~i~la~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~l-~~v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 80 GPLRVLDL-GTGAGFPGLPLKIVRP--ELELVLVDATRKKVAFVERAIEVLGL-KGARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp SSCEEEEE-TCTTTTTHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHHTC-SSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred CCCEEEEE-cCCCCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEECcHHHhhcccccCCCceEE
Confidence 56799999 9999999999998763 6899999999999999999998 54 4599999999987542 24799999
Q ss_pred EEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+..+- .++..+++.+.++|+|||.+++...
T Consensus 156 ~s~a~-~~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 156 VARAV-APLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp EEESS-CCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred EECCc-CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 98764 4578899999999999988877654
No 56
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.53 E-value=1e-13 Score=118.21 Aligned_cols=101 Identities=10% Similarity=0.019 Sum_probs=86.8
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++.+|||| |||+|..+..+++.. +.+|+++|+++++++.|++++. ++.++++++.+|+.+. .++||+|
T Consensus 70 ~~~~~~vLDi-GcG~G~~~~~la~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~fD~v 141 (302)
T 3hem_A 70 LEPGMTLLDI-GCGWGSTMRHAVAEY---DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----DEPVDRI 141 (302)
T ss_dssp CCTTCEEEEE-TCTTSHHHHHHHHHH---CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----CCCCSEE
T ss_pred CCCcCEEEEe-eccCcHHHHHHHHhC---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----CCCccEE
Confidence 3567799999 999999999999875 3799999999999999999997 6677999999999865 5899999
Q ss_pred EEcCC------------cCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCN------------LENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~------------~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+.... .+++..+++.+.+.|+|||.+++.+-
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 98642 24568999999999999999888654
No 57
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.52 E-value=1e-13 Score=121.20 Aligned_cols=110 Identities=14% Similarity=0.088 Sum_probs=88.6
Q ss_pred HHHHHHh-hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCC-cEEEEEcchHHHhh
Q 041509 31 FISALAA-GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDAS-HVEFVIGDAQSLLL 106 (211)
Q Consensus 31 lL~~l~~-~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~-~V~~~~gda~e~l~ 106 (211)
++..++. ..++++|||+ |||+|..++.++.. +.+|++||+++.+++.|++|++ ++.+ +++++++|+.+.++
T Consensus 143 ~l~~~~~~~~~~~~VLDl-gcGtG~~sl~la~~----ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~ 217 (332)
T 2igt_A 143 WLKNAVETADRPLKVLNL-FGYTGVASLVAAAA----GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQ 217 (332)
T ss_dssp HHHHHHHHSSSCCEEEEE-TCTTCHHHHHHHHT----TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEc-ccccCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHH
Confidence 3445544 3456799999 89999999999874 4599999999999999999998 5554 59999999999876
Q ss_pred hc---cCCccEEEEcCCc-------------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 107 SH---FREADFVLIDCNL-------------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 107 ~l---~~~fD~VfiD~~~-------------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.+ .++||+|++|.+. ..|.++++.+.++|+|||.+++..
T Consensus 218 ~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 218 REERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp HHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred HHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 43 4689999999762 136788999999999999866543
No 58
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.52 E-value=4e-14 Score=120.51 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=85.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc----CC-CCcEEEEEcchHHHhhhccCCcc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG----LD-ASHVEFVIGDAQSLLLSHFREAD 113 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~----~~-~~~V~~~~gda~e~l~~l~~~fD 113 (211)
.++++|||| |||+|..+..+++.. +..+|++||+||++++.|++++. ++ ..+++++++|+.+.++...++||
T Consensus 74 ~~~~~VLdi-G~G~G~~~~~l~~~~--~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 74 PNPEHVLVV-GGGDGGVIREILKHP--SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp SSCCEEEEE-SCTTCHHHHHHTTCT--TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCCCEEEEE-CCchHHHHHHHHhCC--CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCee
Confidence 468999999 999999999887642 25799999999999999999984 23 46899999999998875567999
Q ss_pred EEEEcCCcCc-------HHHHHHHHHhcCCCCcEEEE
Q 041509 114 FVLIDCNLEN-------HEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 114 ~VfiD~~~~~-------y~~~l~~~~~~L~pgG~viv 143 (211)
+|++|..... -.++++.+.+.|+|||.+++
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~ 187 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVA 187 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 9999975431 26899999999999887665
No 59
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.52 E-value=8.1e-14 Score=113.03 Aligned_cols=118 Identities=10% Similarity=-0.007 Sum_probs=92.5
Q ss_pred hhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCC----cEEEEEc
Q 041509 26 PNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDAS----HVEFVIG 99 (211)
Q Consensus 26 ~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~----~V~~~~g 99 (211)
+...+++..++...++++|||+ |||+|..+.+++...+ ..+|+++|+++++++.|++++. ++.+ +++++.+
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDi-GcG~G~~~~~l~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAKKVIDL-GCGEGNLLSLLLKDKS--FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQS 91 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEE-TCTTCHHHHHHHTSTT--CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHhhcCCCEEEEe-cCCCCHHHHHHHhcCC--CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeC
Confidence 4445566666666788999999 9999999999987542 4799999999999999999987 4433 8999999
Q ss_pred chHHHhhhccCCccEEEEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEecC
Q 041509 100 DAQSLLLSHFREADFVLIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 100 da~e~l~~l~~~fD~VfiD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
|+... +...++||+|+...... ....+++.+.+.|+|||.++...|.
T Consensus 92 d~~~~-~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 92 SLVYR-DKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp CSSSC-CGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred ccccc-ccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 98543 32357999999765332 3368899999999999877776654
No 60
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.52 E-value=9.7e-14 Score=114.30 Aligned_cols=130 Identities=15% Similarity=0.059 Sum_probs=102.5
Q ss_pred HHHHHHHH-hhcCCcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHh
Q 041509 9 ATKAYLKT-LKMGQKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKIL 87 (211)
Q Consensus 9 ~~~ay~~~-~~~~~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~ 87 (211)
....+.+. +......+.|.....+...+...++.+|||+ |||+|..++.+++. +++|+++|+++++++.|++++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vldi-G~G~G~~~~~l~~~----~~~v~~vD~~~~~~~~a~~~~ 133 (248)
T 2yvl_A 59 TLEEIILLGFERKTQIIYPKDSFYIALKLNLNKEKRVLEF-GTGSGALLAVLSEV----AGEVWTFEAVEEFYKTAQKNL 133 (248)
T ss_dssp CHHHHHHHTSCCSSCCCCHHHHHHHHHHTTCCTTCEEEEE-CCTTSHHHHHHHHH----SSEEEEECSCHHHHHHHHHHH
T ss_pred CHHHHHHhcCcCCCCcccchhHHHHHHhcCCCCCCEEEEe-CCCccHHHHHHHHh----CCEEEEEecCHHHHHHHHHHH
Confidence 34445533 2223345678777777777777788999999 99999999999987 579999999999999999999
Q ss_pred c--CCCCcEEEEEcchHHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 88 G--LDASHVEFVIGDAQSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 88 ~--~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+ +..++++++.+|+.+.... .++||+||.+.. +....++.+.+.|+|||.+++...
T Consensus 134 ~~~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 134 KKFNLGKNVKFFNVDFKDAEVP-EGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp HHTTCCTTEEEECSCTTTSCCC-TTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEEES
T ss_pred HHcCCCCcEEEEEcChhhcccC-CCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 7 5557899999999876411 468999999765 445678888999999998888664
No 61
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.52 E-value=6.1e-14 Score=119.61 Aligned_cols=103 Identities=17% Similarity=0.150 Sum_probs=85.9
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc---C--------CCCcEEEEEcchHHHh
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG---L--------DASHVEFVIGDAQSLL 105 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~---~--------~~~~V~~~~gda~e~l 105 (211)
...++++|||| |||+|..+.++++. + .++|++||+||++++.|+++++ + ...+++++.+|+.+.+
T Consensus 72 ~~~~~~~VLdi-G~G~G~~~~~l~~~-~--~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l 147 (281)
T 1mjf_A 72 AHPKPKRVLVI-GGGDGGTVREVLQH-D--VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFI 147 (281)
T ss_dssp HSSCCCEEEEE-ECTTSHHHHHHTTS-C--CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHH
T ss_pred hCCCCCeEEEE-cCCcCHHHHHHHhC-C--CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHh
Confidence 34578999999 99999999999875 2 5899999999999999999982 1 2468999999999988
Q ss_pred hhccCCccEEEEcCCc------Cc-HHHHHHHHHhcCCCCcEEEEE
Q 041509 106 LSHFREADFVLIDCNL------EN-HEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 106 ~~l~~~fD~VfiD~~~------~~-y~~~l~~~~~~L~pgG~viv~ 144 (211)
+. .++||+|++|... .. ..++++.+.+.|+|||.+++.
T Consensus 148 ~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 148 KN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp HH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred cc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 76 7899999999863 11 478999999999998877663
No 62
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.52 E-value=8.6e-14 Score=115.74 Aligned_cols=111 Identities=6% Similarity=-0.034 Sum_probs=89.9
Q ss_pred HHHHHhhCC-CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc
Q 041509 32 ISALAAGNN-AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 32 L~~l~~~~~-~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l 108 (211)
|..++...+ +.+|+|| |||+|+.++.+|...+ .++|+++|++|.+++.|++|++ ++.++|+++.||+.+.++.
T Consensus 6 L~~l~~~v~~g~~VlDI-GtGsG~l~i~la~~~~--~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~- 81 (225)
T 3kr9_A 6 LELVASFVSQGAILLDV-GSDHAYLPIELVERGQ--IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE- 81 (225)
T ss_dssp HHHHHTTSCTTEEEEEE-TCSTTHHHHHHHHTTS--EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-
T ss_pred HHHHHHhCCCCCEEEEe-CCCcHHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-
Confidence 455555444 5689999 9999999999998642 5799999999999999999998 6778899999999887653
Q ss_pred cCCccEEEEcCCcC-cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 109 FREADFVLIDCNLE-NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 109 ~~~fD~VfiD~~~~-~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
.++||.|++.+.-. ...+.++.+.+.|+|+|.+++.-+
T Consensus 82 ~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 82 TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 33799999865433 357889999999999888887555
No 63
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=4.2e-14 Score=119.08 Aligned_cols=116 Identities=18% Similarity=0.142 Sum_probs=94.4
Q ss_pred HHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC-----CCCcEEEEEcchH
Q 041509 28 EAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL-----DASHVEFVIGDAQ 102 (211)
Q Consensus 28 ~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~-----~~~~V~~~~gda~ 102 (211)
.+.+|..++...++.+|||+ |||+|..++.++...+ +.+|++||+++++++.|++|+.. +.++++++++|+.
T Consensus 24 D~~lL~~~~~~~~~~~VLDl-G~G~G~~~l~la~~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~ 100 (260)
T 2ozv_A 24 DAMLLASLVADDRACRIADL-GAGAGAAGMAVAARLE--KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVT 100 (260)
T ss_dssp HHHHHHHTCCCCSCEEEEEC-CSSSSHHHHHHHHHCT--TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTT
T ss_pred HHHHHHHHhcccCCCEEEEe-CChHhHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHH
Confidence 45677777777778899999 9999999999998763 58999999999999999999863 3457999999998
Q ss_pred HHhhh-----c-cCCccEEEEcCCc---------------------CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 103 SLLLS-----H-FREADFVLIDCNL---------------------ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 103 e~l~~-----l-~~~fD~VfiD~~~---------------------~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+.++. + .++||+|+.+.+. ..+..+++.+.++|+|||.+++...
T Consensus 101 ~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 101 LRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp CCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 87431 1 4689999998421 2367889999999999998877553
No 64
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.51 E-value=4.7e-14 Score=115.18 Aligned_cols=117 Identities=9% Similarity=0.080 Sum_probs=90.0
Q ss_pred CChhHHHH-HHHHH-hhCCCCeEEEEccccHHHHHHHHHHHcc---CCCcEEEEEeCChhHHHHHHHHhc--CC----CC
Q 041509 24 KEPNEAEF-ISALA-AGNNAQLMVVACANVANATTLALAAAAH---QTGGRVVCILRRVEEYKLSKKILG--LD----AS 92 (211)
Q Consensus 24 ~~~~~~~l-L~~l~-~~~~~~~VLEi~Gtg~G~stl~la~a~~---~~~g~v~tiE~~~~~~~~Ar~~~~--~~----~~ 92 (211)
..|..... +..+. ...++.+|||+ |||+|+.+..+++... .+.++|+++|+++++++.|+++++ +. ..
T Consensus 62 ~~p~~~~~~~~~l~~~~~~~~~VLdi-G~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 140 (227)
T 2pbf_A 62 SAPHMHALSLKRLINVLKPGSRAIDV-GSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKID 140 (227)
T ss_dssp CCHHHHHHHHHHHTTTSCTTCEEEEE-SCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSST
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEE-CCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccC
Confidence 44555444 34443 35567899999 9999999999998763 025799999999999999999987 42 46
Q ss_pred cEEEEEcchHHHh----hhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 93 HVEFVIGDAQSLL----LSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 93 ~V~~~~gda~e~l----~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+++++.+|+.+.. .. .++||+|++++.... +++.+.+.|+|||.+++.-
T Consensus 141 ~v~~~~~d~~~~~~~~~~~-~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 141 NFKIIHKNIYQVNEEEKKE-LGLFDAIHVGASASE---LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp TEEEEECCGGGCCHHHHHH-HCCEEEEEECSBBSS---CCHHHHHHEEEEEEEEEEE
T ss_pred CEEEEECChHhcccccCcc-CCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEEE
Confidence 8999999998754 32 578999999987663 3567778889988877754
No 65
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.51 E-value=5.4e-14 Score=118.29 Aligned_cols=130 Identities=19% Similarity=0.171 Sum_probs=102.8
Q ss_pred HHHHHHhhcCCcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-C
Q 041509 11 KAYLKTLKMGQKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-L 89 (211)
Q Consensus 11 ~ay~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~ 89 (211)
..|...+......+.|.....+...+...++.+|||+ |||+|..++.++..+.+ +++|+++|+++++++.|+++++ .
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vLdi-G~G~G~~~~~l~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 70 VDYVMSMPRGPQVIYPKDAAQIVHEGDIFPGARVLEA-GAGSGALTLSLLRAVGP-AGQVISYEQRADHAEHARRNVSGC 147 (280)
T ss_dssp HHHHTTSCSCSCCCCHHHHHHHHHHTTCCTTCEEEEE-CCTTSHHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHhhccccceeecHHHHHHHHHHcCCCCCCEEEEE-cccccHHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHh
Confidence 3455555444456777777766666677788899999 99999999999987643 6899999999999999999986 2
Q ss_pred ---CCCcEEEEEcchHHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 90 ---DASHVEFVIGDAQSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 90 ---~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.++++++.+|+.+... ..++||+|++|.. +..++++.+.+.|+|||.+++..
T Consensus 148 ~g~~~~~v~~~~~d~~~~~~-~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 148 YGQPPDNWRLVVSDLADSEL-PDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp HTSCCTTEEEECSCGGGCCC-CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCcEEEEECchHhcCC-CCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 25789999999987621 1568999999765 34578899999999988887755
No 66
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.51 E-value=6.8e-14 Score=121.20 Aligned_cols=124 Identities=13% Similarity=0.048 Sum_probs=100.6
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.++.....++..++...++.+|||+ |||+|..|+.+++.++. .++|+++|+++.+++.+++|++ +. .+++++++|
T Consensus 101 ~~qd~~s~l~~~~l~~~~g~~VLDl-g~G~G~~t~~la~~~~~-~~~v~avD~s~~~l~~a~~~~~~~g~-~~v~~~~~D 177 (315)
T 1ixk_A 101 YIQEASSMYPPVALDPKPGEIVADM-AAAPGGKTSYLAQLMRN-DGVIYAFDVDENRLRETRLNLSRLGV-LNVILFHSS 177 (315)
T ss_dssp EECCHHHHHHHHHHCCCTTCEEEEC-CSSCSHHHHHHHHHTTT-CSEEEEECSCHHHHHHHHHHHHHHTC-CSEEEESSC
T ss_pred EEeCHHHHHHHHHhCCCCCCEEEEe-CCCCCHHHHHHHHHhCC-CCEEEEEcCCHHHHHHHHHHHHHhCC-CeEEEEECC
Confidence 4556666677777777788899999 79999999999988743 6899999999999999999998 54 479999999
Q ss_pred hHHHhhhccCCccEEEEcCCcC-------------------------cHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 101 AQSLLLSHFREADFVLIDCNLE-------------------------NHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 101 a~e~l~~l~~~fD~VfiD~~~~-------------------------~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
+.+... ..++||.|++|++-. .+.++++.+.++|+|||.+++....+.+
T Consensus 178 ~~~~~~-~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~ 251 (315)
T 1ixk_A 178 SLHIGE-LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP 251 (315)
T ss_dssp GGGGGG-GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG
T ss_pred hhhccc-ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh
Confidence 988754 467899999996411 0257889999999999988887765544
No 67
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.51 E-value=7.8e-14 Score=124.06 Aligned_cols=106 Identities=14% Similarity=0.049 Sum_probs=87.5
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCC-cEEEEEcchHHHhhhc---cCCc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDAS-HVEFVIGDAQSLLLSH---FREA 112 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~-~V~~~~gda~e~l~~l---~~~f 112 (211)
.++++|||+ |||+|..++++|... ..+|++||+++++++.|++|++ ++.+ +++|+++|+.+.++.+ .++|
T Consensus 211 ~~~~~VLDl-~cGtG~~sl~la~~g---a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 211 AAGKTVLNL-FSYTAAFSVAAAMGG---AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp TBTCEEEEE-TCTTTHHHHHHHHTT---BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCeEEEE-eeccCHHHHHHHHCC---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCc
Confidence 467899999 899999999998741 3599999999999999999998 5544 8999999999987654 3589
Q ss_pred cEEEEcCCcC------------cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 113 DFVLIDCNLE------------NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 113 D~VfiD~~~~------------~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
|+|++|.+.- .|.++++.+.++|+|||.+++..|..
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9999997541 35667788889999999888877644
No 68
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.51 E-value=4e-14 Score=124.00 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=88.4
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc----CC-CCcEEEEEcchHHHhhhc-cCC
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG----LD-ASHVEFVIGDAQSLLLSH-FRE 111 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~----~~-~~~V~~~~gda~e~l~~l-~~~ 111 (211)
..++++|||| |||+|..+.++++.. +..+|++||+++++++.|++++. ++ ..+++++++|+.+.++.. .++
T Consensus 118 ~~~~~~VLdI-G~G~G~~a~~la~~~--~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 118 IPNPKKVLVI-GGGDGGVLREVARHA--SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SSCCCEEEEE-TCSSSHHHHHHTTCT--TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCCEEEEE-CCCccHHHHHHHHcC--CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCC
Confidence 3578999999 999999999998753 25899999999999999999985 23 468999999999987654 478
Q ss_pred ccEEEEcCCcC----c---HHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 112 ADFVLIDCNLE----N---HEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 112 fD~VfiD~~~~----~---y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
||+|++|.... . +.++++.+.+.|+|||.+++..+..+
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 99999997521 1 57899999999999887666434443
No 69
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.51 E-value=8.8e-14 Score=116.24 Aligned_cols=106 Identities=10% Similarity=0.045 Sum_probs=89.2
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHh--hhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLL--LSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l--~~l~~~fD~V 115 (211)
..++.+|||+ |||+|+++..+|....+ .|+|+++|++|++++.++++.+. ..++..+.+|+.+.. +.+.+.+|+|
T Consensus 75 ikpG~~Vldl-G~G~G~~~~~la~~VG~-~G~V~avD~s~~~~~~l~~~a~~-~~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 75 VKEGDRILYL-GIASGTTASHMSDIIGP-RGRIYGVEFAPRVMRDLLTVVRD-RRNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CCTTCEEEEE-TCTTSHHHHHHHHHHCT-TCEEEEEECCHHHHHHHHHHSTT-CTTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred CCCCCEEEEe-cCcCCHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHhhHh-hcCeeEEEEeccCccccccccceEEEE
Confidence 5678999999 99999999999999865 89999999999999999998773 357999999986542 3236789999
Q ss_pred EEcCCcC-cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCNLE-NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~~~-~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|.|.... +....++.+.+.|+|||.++++..
T Consensus 152 f~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 152 YADVAQPEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp EECCCCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEeccCChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 9997665 456789999999999999888653
No 70
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.51 E-value=6.7e-14 Score=110.16 Aligned_cols=112 Identities=13% Similarity=0.031 Sum_probs=91.1
Q ss_pred HHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCC-cEEEEEcchHHH
Q 041509 28 EAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDAS-HVEFVIGDAQSL 104 (211)
Q Consensus 28 ~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~-~V~~~~gda~e~ 104 (211)
..+.+...+...++.+|||+ |||+|..+..++.. +.+++++|+++++++.|++++. +..+ +++++.+|+.+.
T Consensus 40 ~~~~l~~~~~~~~~~~vLdi-G~G~G~~~~~~~~~----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDL-GCGYGVIGIALADE----VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN 114 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEE-TCTTSHHHHHHGGG----SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT
T ss_pred HHHHHHHHcccCCCCeEEEe-CCCCCHHHHHHHHc----CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc
Confidence 44555555566678899999 99999999988865 5799999999999999999997 4333 599999999875
Q ss_pred hhhccCCccEEEEcCCc----CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 105 LLSHFREADFVLIDCNL----ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 105 l~~l~~~fD~VfiD~~~----~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
++ .++||+|+++... ......++.+.+.|+|||.+++.+.
T Consensus 115 ~~--~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 115 VK--DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp CT--TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cc--cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 44 5789999998753 3457889999999999998888664
No 71
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.51 E-value=2.8e-14 Score=120.67 Aligned_cols=130 Identities=12% Similarity=0.089 Sum_probs=91.7
Q ss_pred HHHHHhhcCCcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-C-
Q 041509 12 AYLKTLKMGQKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-L- 89 (211)
Q Consensus 12 ay~~~~~~~~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~- 89 (211)
.|...+......+.+...+++...+...++.+|||+ |||+|..++.+++.+.+ +++|+++|+++++++.|+++++ .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLD~-G~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~ 159 (275)
T 1yb2_A 82 YFGRVIRRNTQIISEIDASYIIMRCGLRPGMDILEV-GVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFY 159 (275)
T ss_dssp GHHHHC------------------CCCCTTCEEEEE-CCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTS
T ss_pred HHHhhccccccccChhhHHHHHHHcCCCCcCEEEEe-cCCCCHHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhcC
Confidence 344444433345566666666666677778899999 99999999999987533 6899999999999999999997 3
Q ss_pred CCCcEEEEEcchHHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecC
Q 041509 90 DASHVEFVIGDAQSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 90 ~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
..++++++.+|+.+.++ .++||+|++|.. +..+.++.+.+.|+|||.+++.+..
T Consensus 160 g~~~v~~~~~d~~~~~~--~~~fD~Vi~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 160 DIGNVRTSRSDIADFIS--DQMYDAVIADIP--DPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp CCTTEEEECSCTTTCCC--SCCEEEEEECCS--CGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred CCCcEEEEECchhccCc--CCCccEEEEcCc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 34689999999987433 468999999754 4567899999999999988887643
No 72
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.51 E-value=1.1e-13 Score=113.12 Aligned_cols=104 Identities=11% Similarity=0.081 Sum_probs=85.7
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHh--hhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLL--LSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l--~~l~~~fD~V 115 (211)
..+..+|||+ |||+|..++.++..+++ +++|+++|.++++++.++++.+.. .+++++.+|+.+.. ..+.++||+|
T Consensus 71 ~~~~~~vLDl-G~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v 147 (227)
T 1g8a_A 71 IKPGKSVLYL-GIASGTTASHVSDIVGW-EGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp CCTTCEEEEE-TTTSTTHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred CCCCCEEEEE-eccCCHHHHHHHHHhCC-CeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEE
Confidence 3457799999 99999999999988643 589999999999999999998843 68999999998742 2235689999
Q ss_pred EEcCCcCcHHH-HHHHHHhcCCCCcEEEEE
Q 041509 116 LIDCNLENHEG-VLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~~~y~~-~l~~~~~~L~pgG~viv~ 144 (211)
++|....+... +++.+.+.|+|||.+++.
T Consensus 148 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 148 FEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 99987555544 499999999999888775
No 73
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.50 E-value=1.1e-13 Score=123.18 Aligned_cols=107 Identities=12% Similarity=0.047 Sum_probs=91.2
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CC-CCcEEEEEcchHHHhhhc---cCCc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LD-ASHVEFVIGDAQSLLLSH---FREA 112 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~-~~~V~~~~gda~e~l~~l---~~~f 112 (211)
.++++|||+ |||+|..++.+|... .++|+++|+++++++.|++|++ +. .++++++.+|+.+.++.+ .++|
T Consensus 219 ~~~~~VLDl-~cG~G~~sl~la~~g---~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNC-FSYTGGFAVSALMGG---CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEE-SCTTCSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEe-eccCCHHHHHHHHCC---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCC
Confidence 577899999 899999999998741 4699999999999999999998 54 448999999999987654 4689
Q ss_pred cEEEEcCCc------------CcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 113 DFVLIDCNL------------ENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 113 D~VfiD~~~------------~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
|+|++|.+. ..|.+.+..+.+.|+|||.++++.|...
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 999999765 5678899999999999998888776543
No 74
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.50 E-value=1.9e-13 Score=111.58 Aligned_cols=104 Identities=12% Similarity=0.018 Sum_probs=84.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhhc-cCCccEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLSH-FREADFVL 116 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~l-~~~fD~Vf 116 (211)
.+..+|||| |||+|..++.||...+ +.+|++||+++++++.|++++. ....+|+++.+|+.++...+ .+.||.|+
T Consensus 37 ~~~~~vLDi-GcG~G~~~~~la~~~p--~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 37 NDNPIHIEV-GTGKGQFISGMAKQNP--DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp SCCCEEEEE-CCTTSHHHHHHHHHCT--TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CCCceEEEE-ecCCCHHHHHHHHHCC--CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 456789999 9999999999998763 6899999999999999999987 32367999999998853222 56899999
Q ss_pred EcCCcC-----------cHHHHHHHHHhcCCCCcEEEEEe
Q 041509 117 IDCNLE-----------NHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 117 iD~~~~-----------~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+..... .+..+++.+.+.|+|||.+++..
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 864211 14789999999999999988765
No 75
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.50 E-value=1.3e-13 Score=110.67 Aligned_cols=115 Identities=17% Similarity=0.125 Sum_probs=90.7
Q ss_pred hhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHH
Q 041509 26 PNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQS 103 (211)
Q Consensus 26 ~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e 103 (211)
+...+.+...+.. ++.+|||+ |||+|..+..++.. .+.+++++|+++++++.|+++++ +...+++++++|+.+
T Consensus 30 ~~~~~~~~~~~~~-~~~~vLdi-G~G~G~~~~~l~~~---~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 104 (219)
T 3dlc_A 30 PIIAENIINRFGI-TAGTCIDI-GSGPGALSIALAKQ---SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN 104 (219)
T ss_dssp HHHHHHHHHHHCC-CEEEEEEE-TCTTSHHHHHHHHH---SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB
T ss_pred HHHHHHHHHhcCC-CCCEEEEE-CCCCCHHHHHHHHc---CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH
Confidence 3334444444433 33499999 99999999999987 26799999999999999999998 556789999999987
Q ss_pred HhhhccCCccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 104 LLLSHFREADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 104 ~l~~l~~~fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
. +...++||+|+..... .+....++.+.+.|+|||.+++.+.
T Consensus 105 ~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 105 I-PIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp C-SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred C-CCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEec
Confidence 4 3225799999998643 3568899999999999998888653
No 76
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.49 E-value=7e-14 Score=120.23 Aligned_cols=104 Identities=14% Similarity=0.094 Sum_probs=85.1
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc----CC-CCcEEEEEcchHHHhhhccCCc
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG----LD-ASHVEFVIGDAQSLLLSHFREA 112 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~----~~-~~~V~~~~gda~e~l~~l~~~f 112 (211)
..++++|||+ |||+|..+..+++.. +.++|++||+|+++++.|++++. ++ ..+++++++|+.+.++...++|
T Consensus 88 ~~~~~~VLdi-G~G~G~~~~~l~~~~--~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 164 (296)
T 1inl_A 88 HPNPKKVLII-GGGDGGTLREVLKHD--SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEF 164 (296)
T ss_dssp SSSCCEEEEE-ECTTCHHHHHHTTST--TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCE
T ss_pred CCCCCEEEEE-cCCcCHHHHHHHhcC--CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCc
Confidence 3567899999 999999999988653 25899999999999999999984 23 4689999999999876556789
Q ss_pred cEEEEcCCcC--------cHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLE--------NHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~--------~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|+|++|.... ...++++.+.+.|+|||.+++.
T Consensus 165 D~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 165 DVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9999997533 2378999999999998877663
No 77
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.49 E-value=7.7e-14 Score=126.93 Aligned_cols=128 Identities=14% Similarity=0.092 Sum_probs=105.0
Q ss_pred CCcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEE
Q 041509 20 GQKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFV 97 (211)
Q Consensus 20 ~~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~ 97 (211)
+...++.....++..++...++.+|||+ |||+|..|+.||+.++. .|+|+++|+++++++.+++|++ +. .+|+++
T Consensus 85 G~~~vQd~ss~l~~~~L~~~~g~~VLDl-caGpGgkt~~lA~~~~~-~g~V~AvDis~~rl~~~~~n~~r~g~-~nv~v~ 161 (456)
T 3m4x_A 85 GYEYSQEPSAMIVGTAAAAKPGEKVLDL-CAAPGGKSTQLAAQMKG-KGLLVTNEIFPKRAKILSENIERWGV-SNAIVT 161 (456)
T ss_dssp TSCEECCTTTHHHHHHHCCCTTCEEEES-SCTTCHHHHHHHHHHTT-CSEEEEECSSHHHHHHHHHHHHHHTC-SSEEEE
T ss_pred CcEEEECHHHHHHHHHcCCCCCCEEEEE-CCCcCHHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHHcCC-CceEEE
Confidence 3445666677788888888888999999 69999999999988753 6899999999999999999998 54 579999
Q ss_pred EcchHHHhhhccCCccEEEEcCCcC-------------------------cHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 98 IGDAQSLLLSHFREADFVLIDCNLE-------------------------NHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 98 ~gda~e~l~~l~~~fD~VfiD~~~~-------------------------~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
++|+.+......++||.|++|++-. .+.++++.+.++|+|||.++.+...+.+
T Consensus 162 ~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~ 239 (456)
T 3m4x_A 162 NHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP 239 (456)
T ss_dssp CCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG
T ss_pred eCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc
Confidence 9999987654568999999997611 1237788999999999988887776654
No 78
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=1.4e-13 Score=111.40 Aligned_cols=116 Identities=13% Similarity=0.058 Sum_probs=92.5
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcch
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDA 101 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda 101 (211)
..|.....+...+...++.+|||+ |||+|+.+..++....+ .++|+++|+++++++.|++++. +. .+++++.+|+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~vLdi-G~G~G~~~~~l~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~ 137 (215)
T 2yxe_A 61 SAIHMVGMMCELLDLKPGMKVLEI-GTGCGYHAAVTAEIVGE-DGLVVSIERIPELAEKAERTLRKLGY-DNVIVIVGDG 137 (215)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEE-CCTTSHHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEESCG
T ss_pred CcHHHHHHHHHhhCCCCCCEEEEE-CCCccHHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCC-CCeEEEECCc
Confidence 456666666666677778899999 99999999999988732 4899999999999999999987 43 5699999999
Q ss_pred HHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 102 QSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 102 ~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
.+.++. .++||+|+++....... +.+.+.|+|||.+++...
T Consensus 138 ~~~~~~-~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 138 TLGYEP-LAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp GGCCGG-GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEES
T ss_pred ccCCCC-CCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEEEC
Confidence 765442 57899999987665433 477888999988877543
No 79
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.49 E-value=2.1e-14 Score=123.70 Aligned_cols=104 Identities=12% Similarity=0.146 Sum_probs=82.6
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--C---C-CCcEEEEEcchHHHhhhccCC
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--L---D-ASHVEFVIGDAQSLLLSHFRE 111 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~---~-~~~V~~~~gda~e~l~~l~~~ 111 (211)
..++++|||| |||+|..+..+++.. +..+|++||+|+++++.|++++. + + ..+++++++|+.+.++...++
T Consensus 81 ~~~~~~VLdi-G~G~G~~~~~l~~~~--~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~ 157 (294)
T 3adn_A 81 HGHAKHVLII-GGGDGAMLREVTRHK--NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQT 157 (294)
T ss_dssp STTCCEEEEE-SCTTCHHHHHHHTCT--TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCC
T ss_pred CCCCCEEEEE-eCChhHHHHHHHhCC--CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCC
Confidence 3578999999 999999999998753 36899999999999999999986 1 2 458999999999887655679
Q ss_pred ccEEEEcCCcCc-------HHHHHHHHHhcCCCCcEEEEE
Q 041509 112 ADFVLIDCNLEN-------HEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 112 fD~VfiD~~~~~-------y~~~l~~~~~~L~pgG~viv~ 144 (211)
||+|++|..... ..++++.+.+.|+|||.+++-
T Consensus 158 fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 158 FDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEEEEECC----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred ccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEe
Confidence 999999975431 177999999999998877663
No 80
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.49 E-value=2.3e-13 Score=114.84 Aligned_cols=101 Identities=16% Similarity=0.194 Sum_probs=86.6
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|++++. +...+++++.+|+.+..+...++||+|++
T Consensus 68 ~~~~vLDi-GcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 142 (285)
T 4htf_A 68 QKLRVLDA-GGGEGQTAIKMAER----GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILF 142 (285)
T ss_dssp SCCEEEEE-TCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEE
T ss_pred CCCEEEEe-CCcchHHHHHHHHC----CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEE
Confidence 35699999 99999999999875 5799999999999999999997 55578999999999876444689999998
Q ss_pred cCCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 118 DCNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 118 D~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.... .+...+++.+.+.|+|||.+++.+
T Consensus 143 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 143 HAVLEWVADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp ESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CchhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 7643 366889999999999999888765
No 81
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.49 E-value=1e-13 Score=126.36 Aligned_cols=125 Identities=14% Similarity=0.047 Sum_probs=103.2
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEc
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIG 99 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~g 99 (211)
..++.....++..++...++.+|||+ |||+|..|+.||+.++. .|+|+++|+++++++.+++|++ +.. |+++++
T Consensus 83 ~~vQd~ss~l~a~~L~~~~g~~VLDl-gaGpG~kt~~LA~~~~~-~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~ 158 (464)
T 3m6w_A 83 YYIQEPSAQAVGVLLDPKPGERVLDL-AAAPGGKTTHLAARMGG-KGLLLANEVDGKRVRGLLENVERWGAP--LAVTQA 158 (464)
T ss_dssp EEECCTTTHHHHHHHCCCTTCEEEES-SCTTCHHHHHHHHHTTT-CSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECS
T ss_pred EEEECHHHHHHHHhcCcCCCCEEEEE-cCCcCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEEC
Confidence 34666667777777788888999999 79999999999998753 6899999999999999999998 554 999999
Q ss_pred chHHHhhhccCCccEEEEcCCcC-------------------------cHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 100 DAQSLLLSHFREADFVLIDCNLE-------------------------NHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 100 da~e~l~~l~~~fD~VfiD~~~~-------------------------~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
|+.+......++||.|++|++-. .+.++++.+.++|+|||.++.+...+.+
T Consensus 159 Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 159 PPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp CHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred CHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 99987644478999999996521 1267889999999999988887766654
No 82
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.49 E-value=1.4e-13 Score=118.95 Aligned_cols=118 Identities=14% Similarity=0.171 Sum_probs=94.5
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEc
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIG 99 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~g 99 (211)
....|...+.+...+...++.+|||+ |||+|+.++.+++..+. +++|+++|+++++++.|+++++ ++ .+++++.+
T Consensus 57 ~~~~~~~~~~l~~~l~~~~~~~VLDi-GcG~G~~~~~la~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~g~-~~v~~~~~ 133 (317)
T 1dl5_A 57 TSSQPSLMALFMEWVGLDKGMRVLEI-GGGTGYNAAVMSRVVGE-KGLVVSVEYSRKICEIAKRNVERLGI-ENVIFVCG 133 (317)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEE-CCTTSHHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEES
T ss_pred eccCHHHHHHHHHhcCCCCcCEEEEe-cCCchHHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEEC
Confidence 34555666666666677788999999 99999999999987642 5889999999999999999997 44 45999999
Q ss_pred chHHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 100 DAQSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 100 da~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|+.+.++. .++||+|+++....... +.+.+.|+|||.+++..+
T Consensus 134 d~~~~~~~-~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 134 DGYYGVPE-FSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CGGGCCGG-GCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEEBC
T ss_pred Chhhcccc-CCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEEEC
Confidence 99886553 57899999998766443 566778899988887654
No 83
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.49 E-value=5.6e-14 Score=119.48 Aligned_cols=102 Identities=12% Similarity=0.056 Sum_probs=86.9
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
.++++|||+ |||+|+.++.+|.... .+|+++|+++++++.|++|++ +..++++++++|+.+.+. .++||+|+
T Consensus 124 ~~~~~VLDl-gcG~G~~~~~la~~~~---~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDM-FAGIGHLSLPIAVYGK---AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRIL 197 (278)
T ss_dssp CTTCEEEET-TCTTTTTHHHHHHHTC---CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEE
T ss_pred CCCCEEEEe-cccCCHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--cCCccEEE
Confidence 357899999 8999999999998742 289999999999999999998 666679999999998865 67999999
Q ss_pred EcCCcCcHHHHHHHHHhcCCCCcEEEEEecC
Q 041509 117 IDCNLENHEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 117 iD~~~~~y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
+|... ...++++.+.+.|+|||.+++.++.
T Consensus 198 ~~~p~-~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 198 MGYVV-RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp ECCCS-SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ECCch-hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 98764 3467888889999999988887764
No 84
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.48 E-value=2.3e-13 Score=114.45 Aligned_cols=117 Identities=9% Similarity=-0.029 Sum_probs=89.3
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC-------------
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL------------- 89 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~------------- 89 (211)
...|...+++..+....++.+|||+ |||+|..+.+||+. +.+|++||+++.+++.|++....
T Consensus 51 ~~~~~l~~~~~~~~~~~~~~~vLD~-GCG~G~~~~~La~~----G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~ 125 (252)
T 2gb4_A 51 QGHQLLKKHLDTFLKGQSGLRVFFP-LCGKAIEMKWFADR----GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGA 125 (252)
T ss_dssp TCCHHHHHHHHHHHTTCCSCEEEET-TCTTCTHHHHHHHT----TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTC
T ss_pred CCCHHHHHHHHHhccCCCCCeEEEe-CCCCcHHHHHHHHC----CCeEEEEECCHHHHHHHHHhcccccccccccccccc
Confidence 4455556666555444577899999 99999999999974 56999999999999999876531
Q ss_pred -----CCCcEEEEEcchHHHhhhccCCccEEEEcCC-----cCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 90 -----DASHVEFVIGDAQSLLLSHFREADFVLIDCN-----LENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 90 -----~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~-----~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
...+|+++++|+.+......++||+|+.-+. .+....+++.+.++|+|||.+++.
T Consensus 126 ~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 126 KVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp EEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 1367999999998864422379999995432 234577999999999999987543
No 85
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.48 E-value=2.6e-13 Score=113.35 Aligned_cols=105 Identities=18% Similarity=0.085 Sum_probs=87.8
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccE
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADF 114 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~ 114 (211)
...++.+|||+ |||+|..+..+++.. +.+|+++|+++++++.|++++. ++.++++++.+|+.+. +...++||+
T Consensus 58 ~~~~~~~vLDi-GcG~G~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~ 132 (273)
T 3bus_A 58 DVRSGDRVLDV-GCGIGKPAVRLATAR---DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL-PFEDASFDA 132 (273)
T ss_dssp CCCTTCEEEEE-SCTTSHHHHHHHHHS---CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-CSCTTCEEE
T ss_pred CCCCCCEEEEe-CCCCCHHHHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC-CCCCCCccE
Confidence 34567899999 999999999999864 5799999999999999999987 6667899999999874 322578999
Q ss_pred EEEcCC---cCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 115 VLIDCN---LENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 115 VfiD~~---~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|+.... ..+....++.+.+.|+|||.+++.+-
T Consensus 133 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 133 VWALESLHHMPDRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp EEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 997653 23578899999999999998888663
No 86
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.48 E-value=1.3e-13 Score=119.95 Aligned_cols=104 Identities=15% Similarity=0.125 Sum_probs=86.1
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC----C-CCcEEEEEcchHHHhhhccCCc
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL----D-ASHVEFVIGDAQSLLLSHFREA 112 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~----~-~~~V~~~~gda~e~l~~l~~~f 112 (211)
..++++|||| |||+|..+..+++.. +..+|+++|+|+++++.|++++.. + ..+++++++|+.+.++...++|
T Consensus 114 ~~~~~~VLdi-G~G~G~~~~~l~~~~--~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 190 (321)
T 2pt6_A 114 SKEPKNVLVV-GGGDGGIIRELCKYK--SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTY 190 (321)
T ss_dssp SSSCCEEEEE-ECTTCHHHHHHTTCT--TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCE
T ss_pred CCCCCEEEEE-cCCccHHHHHHHHcC--CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCc
Confidence 4578899999 999999999988643 368999999999999999999872 2 4689999999999876556799
Q ss_pred cEEEEcCCc------CcH-HHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNL------ENH-EGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~------~~y-~~~l~~~~~~L~pgG~viv~ 144 (211)
|+|++|... ..| .++++.+.+.|+|||.+++.
T Consensus 191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 999999732 123 78999999999998877663
No 87
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.48 E-value=6.7e-14 Score=112.06 Aligned_cols=118 Identities=9% Similarity=0.020 Sum_probs=73.4
Q ss_pred ChhHHHHHHHHHhh----CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcc
Q 041509 25 EPNEAEFISALAAG----NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGD 100 (211)
Q Consensus 25 ~~~~~~lL~~l~~~----~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gd 100 (211)
.|.+..++..+... .++.+|||+ |||+|..++.++...+ +.+++++|+++++++.|++++.....+++++++|
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDi-G~G~G~~~~~l~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d 87 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDV-GTGSGCIAVSIALACP--GVSVTAVDLSMDALAVARRNAERFGAVVDWAAAD 87 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEE-ESSBCHHHHHHHHHCT--TEEEEEEECC-------------------CCHHH
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEe-cCCHhHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcc
Confidence 34444444444332 567899999 9999999999998863 6799999999999999999988211289999999
Q ss_pred hHHHhhh---ccCCccEEEEcCCcC-----------------------------cHHHHHHHHHhcCCCCcEEEEEe
Q 041509 101 AQSLLLS---HFREADFVLIDCNLE-----------------------------NHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 101 a~e~l~~---l~~~fD~VfiD~~~~-----------------------------~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.+.++. ..++||+|+.|.+-. .|..+++.+.++|+|||.+++..
T Consensus 88 ~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 88 GIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred hHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 9986552 138999999974310 13677888889999999844444
No 88
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.48 E-value=1.7e-13 Score=121.88 Aligned_cols=105 Identities=15% Similarity=0.048 Sum_probs=89.2
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc---cCCccE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH---FREADF 114 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l---~~~fD~ 114 (211)
++++|||+ |||+|..++.+|.. ..++|+++|+++++++.|++|++ ++.++++++++|+.+.++.+ .++||+
T Consensus 217 ~~~~VLDl-~~G~G~~~~~la~~---g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDV-FTYTGGFAIHAAIA---GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEET-TCTTTHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEe-cCCCCHHHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCE
Confidence 67899999 89999999999874 24699999999999999999998 44458999999999987643 468999
Q ss_pred EEEcCCc------------CcHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 115 VLIDCNL------------ENHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 115 VfiD~~~------------~~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
|++|.+. ..|.+.+..+.++|+|||.++++.+..
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 9999865 457888999999999998887776543
No 89
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.48 E-value=2.4e-13 Score=129.52 Aligned_cols=107 Identities=9% Similarity=0.098 Sum_probs=90.9
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCC-CcEEEEEcchHHHhhhccCCcc
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDA-SHVEFVIGDAQSLLLSHFREAD 113 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~-~~V~~~~gda~e~l~~l~~~fD 113 (211)
...++++|||+ |||+|..+++++.. ...+|++||+++.+++.|++|++ ++. ++++++++|+.+.++...++||
T Consensus 536 ~~~~g~~VLDl-g~GtG~~sl~aa~~---ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD 611 (703)
T 3v97_A 536 QMSKGKDFLNL-FSYTGSATVHAGLG---GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFD 611 (703)
T ss_dssp HHCTTCEEEEE-SCTTCHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEE
T ss_pred HhcCCCcEEEe-eechhHHHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCcc
Confidence 34577899999 89999999998863 24689999999999999999998 554 5899999999998876678999
Q ss_pred EEEEcCCc--------------CcHHHHHHHHHhcCCCCcEEEEEecC
Q 041509 114 FVLIDCNL--------------ENHEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 114 ~VfiD~~~--------------~~y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
+|++|.+. ..|.++++.+.++|+|||.++++.|.
T Consensus 612 ~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 612 LIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 99999852 25788899999999999988876665
No 90
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.48 E-value=1.6e-13 Score=112.90 Aligned_cols=101 Identities=15% Similarity=0.089 Sum_probs=83.9
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH---hhhccCCccEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL---LLSHFREADFV 115 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~---l~~l~~~fD~V 115 (211)
.+..+|||+ |||+|..+.+++...+ .++|+++|+++++++.|+++.+.. .+++++.+|+.+. ++ +.++||+|
T Consensus 73 ~~~~~VLDl-GcG~G~~~~~la~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~-~~~~~D~v 147 (230)
T 1fbn_A 73 KRDSKILYL-GASAGTTPSHVADIAD--KGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYAN-IVEKVDVI 147 (230)
T ss_dssp CTTCEEEEE-SCCSSHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTT-TSCCEEEE
T ss_pred CCCCEEEEE-cccCCHHHHHHHHHcC--CcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccc-cCccEEEE
Confidence 456789999 9999999999998864 589999999999999999998743 7899999999762 12 23789999
Q ss_pred EEcCCc-CcHHHHHHHHHhcCCCCcEEEEE
Q 041509 116 LIDCNL-ENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~-~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+.|... ..+..+++.+.+.|+|||.+++.
T Consensus 148 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 148 YEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 988543 34577899999999999988875
No 91
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.47 E-value=1e-13 Score=117.51 Aligned_cols=108 Identities=16% Similarity=0.095 Sum_probs=89.9
Q ss_pred HHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccE
Q 041509 35 LAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADF 114 (211)
Q Consensus 35 l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~ 114 (211)
+....++.+|||+ |||+|..+..++...+. +.+|+++|+++.+++.|++++.....+++++++|+.+. + ..++||+
T Consensus 17 ~~~~~~~~~vLDi-GcG~G~~~~~l~~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~-~-~~~~fD~ 92 (284)
T 3gu3_A 17 VWKITKPVHIVDY-GCGYGYLGLVLMPLLPE-GSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-E-LNDKYDI 92 (284)
T ss_dssp TSCCCSCCEEEEE-TCTTTHHHHHHTTTSCT-TCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC-C-CSSCEEE
T ss_pred HhccCCCCeEEEe-cCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc-C-cCCCeeE
Confidence 3355678999999 99999999999987753 58999999999999999999873334899999999874 3 2579999
Q ss_pred EEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 115 VLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 115 VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|++.... .+....++.+.+.|+|||.+++.+.
T Consensus 93 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 93 AICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 9997643 3568899999999999998887764
No 92
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.47 E-value=1.5e-13 Score=121.84 Aligned_cols=105 Identities=16% Similarity=0.065 Sum_probs=89.4
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhhc---cCCccEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLSH---FREADFV 115 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~l---~~~fD~V 115 (211)
+.++|||+ |||+|..++.+|.. ..+|+++|+++++++.|++|++ ...++++++++|+.+.++.+ .++||+|
T Consensus 209 ~~~~VLDl-g~G~G~~~~~la~~----~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDV-FSYAGGFALHLALG----FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEE-TCTTTHHHHHHHHH----EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEe-eeccCHHHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEE
Confidence 66789999 89999999999976 4799999999999999999998 32344999999999987654 5689999
Q ss_pred EEcCCc------------CcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 116 LIDCNL------------ENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 116 fiD~~~------------~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
++|.+. ..|.+.++.+.++|+|||.++++.+...
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 999865 4578889999999999998888776543
No 93
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.47 E-value=1.3e-13 Score=117.69 Aligned_cols=104 Identities=15% Similarity=0.124 Sum_probs=86.2
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC----C-CCcEEEEEcchHHHhhhccCCc
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL----D-ASHVEFVIGDAQSLLLSHFREA 112 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~----~-~~~V~~~~gda~e~l~~l~~~f 112 (211)
..++++|||+ |||+|..+..+++.. +..+|++||+|+++++.|++++.. + ..+++++++|+.+.++...++|
T Consensus 76 ~~~~~~VLdi-G~G~G~~~~~l~~~~--~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 152 (283)
T 2i7c_A 76 SKEPKNVLVV-GGGDGGIIRELCKYK--SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTY 152 (283)
T ss_dssp SSSCCEEEEE-ECTTSHHHHHHTTCT--TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCE
T ss_pred CCCCCeEEEE-eCCcCHHHHHHHHcC--CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCc
Confidence 3578899999 999999999888643 258999999999999999999872 2 4789999999999877556799
Q ss_pred cEEEEcCCcC------cH-HHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLE------NH-EGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~------~y-~~~l~~~~~~L~pgG~viv~ 144 (211)
|+|++|.... .| .++++.+.+.|+|||.+++.
T Consensus 153 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 153 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp EEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 9999987421 22 68999999999998877663
No 94
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.47 E-value=1.9e-13 Score=111.48 Aligned_cols=117 Identities=16% Similarity=0.117 Sum_probs=89.4
Q ss_pred CChhHHH-HHHHHH-hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CC----CCcEE
Q 041509 24 KEPNEAE-FISALA-AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LD----ASHVE 95 (211)
Q Consensus 24 ~~~~~~~-lL~~l~-~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~----~~~V~ 95 (211)
..|.... ++..+. ...++.+|||+ |||+|+.+..+++...+ .++|+++|+++++++.|++++. +. .++++
T Consensus 59 ~~p~~~~~~l~~l~~~~~~~~~vLDi-G~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 136 (226)
T 1i1n_A 59 SAPHMHAYALELLFDQLHEGAKALDV-GSGSGILTACFARMVGC-TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQ 136 (226)
T ss_dssp CCHHHHHHHHHHTTTTSCTTCEEEEE-TCTTSHHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEE
T ss_pred cCHHHHHHHHHHHHhhCCCCCEEEEE-cCCcCHHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEE
Confidence 3444433 344333 25567899999 99999999999987642 5799999999999999999987 33 46899
Q ss_pred EEEcchHHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 96 FVIGDAQSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 96 ~~~gda~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
++.+|+.+.... .++||+|+++..... .++.+.+.|+|||.+++...
T Consensus 137 ~~~~d~~~~~~~-~~~fD~i~~~~~~~~---~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 137 LVVGDGRMGYAE-EAPYDAIHVGAAAPV---VPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEESCGGGCCGG-GCCEEEEEECSBBSS---CCHHHHHTEEEEEEEEEEES
T ss_pred EEECCcccCccc-CCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEEEe
Confidence 999999865432 578999999987653 34677888999998887553
No 95
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.47 E-value=2.9e-13 Score=121.01 Aligned_cols=103 Identities=12% Similarity=0.053 Sum_probs=86.1
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
++++|||+ |||+|..|+.+|.. +.+|+++|+++.+++.|++|++ +... ++.++|+.+.++.+.+.||+|++
T Consensus 214 ~g~~VLDl-g~GtG~~sl~~a~~----ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~~~fD~Ii~ 286 (393)
T 4dmg_A 214 PGERVLDV-YSYVGGFALRAARK----GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGLEGPFHHVLL 286 (393)
T ss_dssp TTCEEEEE-SCTTTHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCCCCEEEEEE
T ss_pred CCCeEEEc-ccchhHHHHHHHHc----CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhcCCCCEEEE
Confidence 37899999 89999999999874 4559999999999999999998 5543 46699999998765556999999
Q ss_pred cCCc------------CcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 118 DCNL------------ENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 118 D~~~------------~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
|.+. ..|.++++.+.++|+|||.++++.+...
T Consensus 287 dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 287 DPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 9864 3578899999999999998887776544
No 96
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.47 E-value=1.6e-13 Score=111.22 Aligned_cols=114 Identities=13% Similarity=0.025 Sum_probs=85.2
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC-------------C
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL-------------D 90 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~-------------~ 90 (211)
+.|...+++..+ ...++.+|||+ |||+|..+.+|++. +.+|++||++++|++.|+++... .
T Consensus 7 ~~~~l~~~~~~l-~~~~~~~vLD~-GCG~G~~~~~la~~----g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~ 80 (203)
T 1pjz_A 7 VNKDLQQYWSSL-NVVPGARVLVP-LCGKSQDMSWLSGQ----GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYA 80 (203)
T ss_dssp STHHHHHHHHHH-CCCTTCEEEET-TTCCSHHHHHHHHH----CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEE
T ss_pred CCHHHHHHHHhc-ccCCCCEEEEe-CCCCcHhHHHHHHC----CCeEEEEeCCHHHHHHHHHHccCCccccccccccccc
Confidence 344445555443 33467899999 99999999999975 56999999999999999988651 1
Q ss_pred CCcEEEEEcchHHHhhhccCCccEEEEcCCc-----CcHHHHHHHHHhcCCCCcEEEE
Q 041509 91 ASHVEFVIGDAQSLLLSHFREADFVLIDCNL-----ENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 91 ~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~-----~~y~~~l~~~~~~L~pgG~viv 143 (211)
..+|+++++|+.+......++||+|+.-... .+...+++++.+.|+|||.+++
T Consensus 81 ~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 81 APGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp CSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 3579999999987643212689999964322 2345689999999999887333
No 97
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.47 E-value=1.5e-13 Score=111.11 Aligned_cols=109 Identities=15% Similarity=0.078 Sum_probs=87.9
Q ss_pred HHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc
Q 041509 29 AEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 29 ~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l 108 (211)
.+++..+....++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|++++... .+++++++|+.+.. .
T Consensus 40 ~~~l~~~~~~~~~~~vLDi-GcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~--~ 111 (216)
T 3ofk_A 40 TQLLRLSLSSGAVSNGLEI-GCAAGAFTEKLAPH----CKRLTVIDVMPRAIGRACQRTKRW-SHISWAATDILQFS--T 111 (216)
T ss_dssp HHHHHHHTTTSSEEEEEEE-CCTTSHHHHHHGGG----EEEEEEEESCHHHHHHHHHHTTTC-SSEEEEECCTTTCC--C
T ss_pred HHHHHHHcccCCCCcEEEE-cCCCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHhcccC-CCeEEEEcchhhCC--C
Confidence 3455555556667899999 99999999998865 469999999999999999998742 38999999998875 3
Q ss_pred cCCccEEEEcCCc------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 109 FREADFVLIDCNL------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 109 ~~~fD~VfiD~~~------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.++||+|+..... ......++.+.+.|+|||.+++.+
T Consensus 112 ~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 112 AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 6899999987432 233577999999999988887754
No 98
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.47 E-value=3.4e-13 Score=112.47 Aligned_cols=111 Identities=10% Similarity=-0.049 Sum_probs=90.0
Q ss_pred HHHHHhhC-CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc
Q 041509 32 ISALAAGN-NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 32 L~~l~~~~-~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l 108 (211)
|..++... ++.+|+|| |||+|+.++.++... +.++|+++|++|.+++.|++|++ ++.++|+++.||..+.+..
T Consensus 12 L~~i~~~v~~g~~VlDI-GtGsG~l~i~la~~~--~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~- 87 (230)
T 3lec_A 12 LQKVANYVPKGARLLDV-GSDHAYLPIFLLQMG--YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE- 87 (230)
T ss_dssp HHHHHTTSCTTEEEEEE-TCSTTHHHHHHHHTT--CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-
T ss_pred HHHHHHhCCCCCEEEEE-CCchHHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc-
Confidence 44555544 45689999 999999999998763 25799999999999999999998 7778999999999988653
Q ss_pred cCCccEEEEcCCcC-cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 109 FREADFVLIDCNLE-NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 109 ~~~fD~VfiD~~~~-~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
.++||.|++.+--. ...+.++...+.|+++|.+++.-|
T Consensus 88 ~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 88 ADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred ccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 34899999866443 457788888888999888887665
No 99
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.47 E-value=1.7e-13 Score=111.98 Aligned_cols=106 Identities=8% Similarity=0.030 Sum_probs=87.6
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
..++.+|||+ |||+|..+..++...+ +.+++++|+++++++.|++++.... +++++.+|+.+... .++||+|++
T Consensus 42 ~~~~~~vLDi-G~G~G~~~~~l~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~--~~~fD~v~~ 115 (234)
T 3dtn_A 42 DTENPDILDL-GAGTGLLSAFLMEKYP--EATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYDF--EEKYDMVVS 115 (234)
T ss_dssp SCSSCEEEEE-TCTTSHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCCC--CSCEEEEEE
T ss_pred CCCCCeEEEe-cCCCCHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccCC--CCCceEEEE
Confidence 4567899999 9999999999998863 6899999999999999999988333 89999999987643 389999999
Q ss_pred cCCcC-----cHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 118 DCNLE-----NHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 118 D~~~~-----~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
..... .....++.+.+.|+|||.+++.+....
T Consensus 116 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 116 ALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred eCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 86433 223589999999999999988775443
No 100
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.46 E-value=2.6e-13 Score=111.85 Aligned_cols=115 Identities=12% Similarity=0.148 Sum_probs=89.3
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchH
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQ 102 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~ 102 (211)
..|.....+..++...++.+|||+ |||+|+.+..+++..+ ++|+++|+++++++.|+++++ ....+++++.+|+.
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~vLdi-G~G~G~~~~~la~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~ 150 (235)
T 1jg1_A 75 SAPHMVAIMLEIANLKPGMNILEV-GTGSGWNAALISEIVK---TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS 150 (235)
T ss_dssp CCHHHHHHHHHHHTCCTTCCEEEE-CCTTSHHHHHHHHHHC---SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEE-eCCcCHHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc
Confidence 345566666666677778899999 9999999999998763 789999999999999999997 22345999999984
Q ss_pred HHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 103 SLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
..++. ..+||+|+++....... +.+.+.|+|||.+++..+
T Consensus 151 ~~~~~-~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 151 KGFPP-KAPYDVIIVTAGAPKIP---EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp GCCGG-GCCEEEEEECSBBSSCC---HHHHHTEEEEEEEEEEEC
T ss_pred cCCCC-CCCccEEEECCcHHHHH---HHHHHhcCCCcEEEEEEe
Confidence 44332 45699999998765433 467788999888877553
No 101
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.46 E-value=2.6e-13 Score=110.85 Aligned_cols=107 Identities=10% Similarity=0.089 Sum_probs=87.9
Q ss_pred HHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc
Q 041509 29 AEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 29 ~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l 108 (211)
..++..+....++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|++++.. +++++++|+.+.. .
T Consensus 31 ~~~~~~l~~~~~~~~vLDi-GcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~~--~ 100 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLEL-GSFKGDFTSRLQEH----FNDITCVEASEEAISHAQGRLKD---GITYIHSRFEDAQ--L 100 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEE-SCTTSHHHHHHTTT----CSCEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGCC--C
T ss_pred HHHHHHHHhhcCCCcEEEE-CCCCCHHHHHHHHh----CCcEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHcC--c
Confidence 3445555555678899999 99999999988864 35899999999999999998763 7999999998873 2
Q ss_pred cCCccEEEEcCCc---CcHHHHHHHHH-hcCCCCcEEEEEe
Q 041509 109 FREADFVLIDCNL---ENHEGVLRAVQ-AGNKPNGAVVVGY 145 (211)
Q Consensus 109 ~~~fD~VfiD~~~---~~y~~~l~~~~-~~L~pgG~viv~d 145 (211)
+++||+|++..-. .+....++++. +.|+|||.+++.+
T Consensus 101 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 101 PRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 6799999987643 35688999999 9999999888765
No 102
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.46 E-value=3.9e-13 Score=113.91 Aligned_cols=105 Identities=11% Similarity=0.044 Sum_probs=88.5
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccE
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADF 114 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~ 114 (211)
...++.+|||+ |||+|..+..++... +.+|+++|+++.+++.|++++. +..++++++.+|+.+. +...++||+
T Consensus 79 ~~~~~~~vLDi-GcG~G~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~ 153 (297)
T 2o57_A 79 VLQRQAKGLDL-GAGYGGAARFLVRKF---GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-PCEDNSYDF 153 (297)
T ss_dssp CCCTTCEEEEE-TCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-SSCTTCEEE
T ss_pred CCCCCCEEEEe-CCCCCHHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-CCCCCCEeE
Confidence 44677899999 999999999999875 4699999999999999999987 6678899999999874 322578999
Q ss_pred EEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 115 VLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 115 VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|+..... .+....++.+.+.|+|||.+++.+.
T Consensus 154 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 154 IWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9987543 3568899999999999998888764
No 103
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.46 E-value=4.1e-13 Score=109.72 Aligned_cols=114 Identities=14% Similarity=0.105 Sum_probs=91.6
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchH
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQ 102 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~ 102 (211)
...+...+.+...+...++.+|||+ |||+|+.+..++... ++|+++|+++++++.|++++.... +++++.+|+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~vLdi-G~G~G~~~~~l~~~~----~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~ 126 (231)
T 1vbf_A 53 TTALNLGIFMLDELDLHKGQKVLEI-GTGIGYYTALIAEIV----DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGT 126 (231)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEE-CCTTSHHHHHHHHHS----SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGG
T ss_pred cCCHHHHHHHHHhcCCCCCCEEEEE-cCCCCHHHHHHHHHc----CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 4566666666666677778899999 999999999999863 799999999999999999988333 8999999998
Q ss_pred HHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 103 SLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+.++ ..++||+|+++....... +.+.+.|+|||.+++..+
T Consensus 127 ~~~~-~~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 127 LGYE-EEKPYDRVVVWATAPTLL---CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp GCCG-GGCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEEC
T ss_pred cccc-cCCCccEEEECCcHHHHH---HHHHHHcCCCcEEEEEEc
Confidence 7544 257999999987665332 467788999988877654
No 104
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.46 E-value=1.6e-13 Score=110.29 Aligned_cols=107 Identities=7% Similarity=-0.038 Sum_probs=87.5
Q ss_pred HHHHHHh-hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhh
Q 041509 31 FISALAA-GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLS 107 (211)
Q Consensus 31 lL~~l~~-~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~ 107 (211)
++..+.. ..++.+|||+ |||+|..++.++.. ...+|+++|+++++++.|++++. +.. +++++.+|+.+..
T Consensus 50 ~~~~l~~~~~~~~~vLDi-G~G~G~~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-- 122 (205)
T 3grz_A 50 AMLGIERAMVKPLTVADV-GTGSGILAIAAHKL---GAKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLADV-- 122 (205)
T ss_dssp HHHHHHHHCSSCCEEEEE-TCTTSHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTTC--
T ss_pred HHHHHHHhccCCCEEEEE-CCCCCHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeccccccC--
Confidence 4444433 3467899999 99999999998863 25699999999999999999998 433 4999999997753
Q ss_pred ccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 108 HFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 108 l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.++||+|+.+.....+...++.+.+.|+|||.+++.+
T Consensus 123 -~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 123 -DGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp -CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred -CCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 5799999999887777888999999999988887754
No 105
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.46 E-value=5.2e-14 Score=120.44 Aligned_cols=104 Identities=18% Similarity=0.092 Sum_probs=85.0
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++.+|||+ |||+|..++.++.+.. ++.+|+++|+++.+++.|++++. +..++++++++|+.+... .++||+|
T Consensus 116 l~~~~~vLDi-GcG~G~~~~~la~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v 191 (305)
T 3ocj_A 116 LRPGCVVASV-PCGWMSELLALDYSAC-PGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT--REGYDLL 191 (305)
T ss_dssp CCTTCEEEET-TCTTCHHHHTSCCTTC-TTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC--CSCEEEE
T ss_pred CCCCCEEEEe-cCCCCHHHHHHHHhcC-CCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc--cCCeEEE
Confidence 4567899999 9999999998864332 37899999999999999999998 556779999999988532 4899999
Q ss_pred EEcCC------cCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 116 LIDCN------LENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 116 fiD~~------~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
++... ...+.++++.+.+.|+|||.+++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 192 TSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 98652 2233458999999999988888755
No 106
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.46 E-value=3.1e-13 Score=112.43 Aligned_cols=109 Identities=17% Similarity=0.133 Sum_probs=87.3
Q ss_pred HHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhhccC
Q 041509 32 ISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLSHFR 110 (211)
Q Consensus 32 L~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~l~~ 110 (211)
|...+...++.+|||+ |||+|..+..++.. .++|+++|+++++++.|++++. ....+++++.+|+.+. +..++
T Consensus 29 l~~~l~~~~~~~vLDi-GcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l-~~~~~ 102 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDV-ATGGGHVANAFAPF----VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM-PFTDE 102 (260)
T ss_dssp HHHHHTCCSCCEEEEE-TCTTCHHHHHHGGG----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC-CSCTT
T ss_pred HHHHhCCCCCCEEEEE-eCCCCHHHHHHHHh----CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC-CCCCC
Confidence 3334456678899999 99999999988865 3599999999999999999987 2235799999999774 32257
Q ss_pred CccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 111 EADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 111 ~fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+||+|+..... .+....++++.+.|+|||.+++.+.
T Consensus 103 ~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 103 RFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99999987543 3668899999999999998888764
No 107
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.46 E-value=1.2e-12 Score=114.61 Aligned_cols=119 Identities=18% Similarity=0.076 Sum_probs=97.7
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.+.+..++.+..++...+...|||+ |||+|..++.++....+ +.+|+++|+|+++++.|++|++ ++. +|+++++|
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~-gcGsG~~~ie~a~~~~~-~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D 262 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDP-FTGSGTIALEAASTLGP-TSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRAD 262 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEES-SCTTSHHHHHHHHHHCT-TSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECC
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeC-CCCcCHHHHHHHHhhCC-CceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCC
Confidence 4556667777777776778899999 89999999999987622 5899999999999999999998 555 89999999
Q ss_pred hHHHhhhccCCccEEEEcCCcC-----------cHHHHHHHHHhcCCCCcEEEEEe
Q 041509 101 AQSLLLSHFREADFVLIDCNLE-----------NHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 101 a~e~l~~l~~~fD~VfiD~~~~-----------~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.+.... .+.||+|+.|.+-. .|..+++.+.+.|+|||.+++..
T Consensus 263 ~~~~~~~-~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 263 ARHLPRF-FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp GGGGGGT-CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred hhhCccc-cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9987543 56799999986532 25788999999999999988754
No 108
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.45 E-value=1.5e-13 Score=113.29 Aligned_cols=117 Identities=15% Similarity=0.117 Sum_probs=90.9
Q ss_pred HHHHHHHHHhhC----CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC-CCcEEEEEcchH
Q 041509 28 EAEFISALAAGN----NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD-ASHVEFVIGDAQ 102 (211)
Q Consensus 28 ~~~lL~~l~~~~----~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~-~~~V~~~~gda~ 102 (211)
...++..++... ++.+|||+ |||+|..+..++... ..+|+++|+++++++.|++++... ..+++++.+|+.
T Consensus 63 ~~~~~~~l~~~~~~~~~~~~vLDi-GcG~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 138 (241)
T 2ex4_A 63 SRKFLQRFLREGPNKTGTSCALDC-GAGIGRITKRLLLPL---FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ 138 (241)
T ss_dssp HHHHHHGGGC----CCCCSEEEEE-TCTTTHHHHHTTTTT---CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGG
T ss_pred HHHHHHHHHHhcccCCCCCEEEEE-CCCCCHHHHHHHHhc---CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChh
Confidence 345666555433 47899999 999999999887653 469999999999999999998722 457999999987
Q ss_pred HHhhhccCCccEEEEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 103 SLLLSHFREADFVLIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
+... ..++||+|+++.... .+..+++.+.+.|+|||.+++.++...
T Consensus 139 ~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 189 (241)
T 2ex4_A 139 DFTP-EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQ 189 (241)
T ss_dssp GCCC-CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBS
T ss_pred hcCC-CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCC
Confidence 7533 256899999986432 256889999999999999988876543
No 109
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.45 E-value=2.5e-13 Score=116.51 Aligned_cols=104 Identities=10% Similarity=-0.037 Sum_probs=87.4
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++.+|||+ |||+|..+..+++.. +.+|+++|+++++++.|+++++ ++.++++++.+|+.+. +...++||+|
T Consensus 115 ~~~~~~vLDi-GcG~G~~~~~la~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDA-GCGRGGSMVMAHRRF---GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-PFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEE-SCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-CCCTTCEEEE
T ss_pred CCCCCEEEEe-cCCCCHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-CCCCCCEeEE
Confidence 4567899999 999999999999874 5799999999999999999998 6667899999999864 3225799999
Q ss_pred EEcCCcC--cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCNLE--NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~~~--~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+...... +...+++.+.+.|+|||.+++.+.
T Consensus 190 ~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 190 WNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp EEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9864322 478999999999999999888764
No 110
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.45 E-value=9.3e-13 Score=111.06 Aligned_cols=101 Identities=7% Similarity=-0.008 Sum_probs=85.2
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++.+|||+ |||+|..+..+++.. +.+|+++|+++++++.|++++. +...+++++.+|+.+. .++||+|
T Consensus 62 ~~~~~~vLDi-GcG~G~~~~~l~~~~---~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~fD~v 133 (287)
T 1kpg_A 62 LQPGMTLLDV-GCGWGATMMRAVEKY---DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF----DEPVDRI 133 (287)
T ss_dssp CCTTCEEEEE-TCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC----CCCCSEE
T ss_pred CCCcCEEEEE-CCcccHHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC----CCCeeEE
Confidence 3466799999 999999999999765 4599999999999999999987 5567899999999654 2789999
Q ss_pred EEcCC-----cCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCN-----LENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~-----~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+.... ..++..+++.+.++|+|||.+++.+.
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 98742 24678999999999999998888653
No 111
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.45 E-value=5.5e-13 Score=105.78 Aligned_cols=107 Identities=17% Similarity=0.099 Sum_probs=87.3
Q ss_pred HHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhcc
Q 041509 32 ISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHF 109 (211)
Q Consensus 32 L~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~ 109 (211)
+..++...++.+|||+ |||+|..+.+++.. +.+++++|+++.+++.|++++. +. .+++++.+|+.+. +. .
T Consensus 24 l~~~~~~~~~~~vLdi-G~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~-~~-~ 95 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDL-GCGNGRNSLYLAAN----GYDVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNL-TF-D 95 (199)
T ss_dssp HHHHTTTSCSCEEEEE-TCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGC-CC-C
T ss_pred HHHHhhccCCCeEEEE-cCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhC-CC-C
Confidence 3344455678899999 99999999999874 5699999999999999999987 43 4699999999875 32 6
Q ss_pred CCccEEEEcCC-----cCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 110 READFVLIDCN-----LENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 110 ~~fD~VfiD~~-----~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
++||+|+.... .++...+++.+.+.|+|||.+++.+.
T Consensus 96 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 96 RQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp CCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 79999998753 23678899999999999998777653
No 112
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.45 E-value=5.6e-13 Score=112.57 Aligned_cols=115 Identities=11% Similarity=0.122 Sum_probs=91.7
Q ss_pred ChhHHHHHHHHHhh--CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 25 EPNEAEFISALAAG--NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 25 ~~~~~~lL~~l~~~--~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.|.+..++..+... .++.+|||+ |||+|..++.++...+ +.+|+++|+++++++.|++|++ +. .+++++++|
T Consensus 92 r~~te~l~~~~l~~~~~~~~~vLDl-G~GsG~~~~~la~~~~--~~~v~~vD~s~~~l~~a~~n~~~~~~-~~v~~~~~d 167 (276)
T 2b3t_A 92 RPDTECLVEQALARLPEQPCRILDL-GTGTGAIALALASERP--DCEIIAVDRMPDAVSLAQRNAQHLAI-KNIHILQSD 167 (276)
T ss_dssp CTTHHHHHHHHHHHSCSSCCEEEEE-TCTTSHHHHHHHHHCT--TSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCS
T ss_pred CchHHHHHHHHHHhcccCCCEEEEe-cCCccHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEEcc
Confidence 45555565555544 457799999 8999999999998763 6899999999999999999997 43 479999999
Q ss_pred hHHHhhhccCCccEEEEcCCc----------------------------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 101 AQSLLLSHFREADFVLIDCNL----------------------------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 101 a~e~l~~l~~~fD~VfiD~~~----------------------------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.+.++ .++||+|+.+.+- ..|..+++.+.+.|+|||.+++..
T Consensus 168 ~~~~~~--~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 168 WFSALA--GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp TTGGGT--TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hhhhcc--cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 988654 5789999998421 245778899999999988777643
No 113
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.45 E-value=4.7e-13 Score=107.45 Aligned_cols=101 Identities=7% Similarity=0.016 Sum_probs=85.3
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
++.+|||+ |||+|..++.++...+ +.+++++|+++++++.|+++++ ....+++++++|+.+..+ .++||+|+..
T Consensus 65 ~~~~vLDi-G~G~G~~~~~l~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDV-GTGPGLPGIPLSIVRP--EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS--EPPFDGVISR 139 (207)
T ss_dssp CSSEEEEE-TCTTTTTHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC--CSCEEEEECS
T ss_pred CCCeEEEE-CCCCCHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc--cCCcCEEEEe
Confidence 46899999 9999999999998763 6899999999999999999998 223449999999987643 4789999976
Q ss_pred CCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 119 CNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+ ...+...++.+.+.|+|||.+++...
T Consensus 140 ~-~~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 140 A-FASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp C-SSSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred c-cCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 5 45788999999999999888887654
No 114
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.45 E-value=2.6e-13 Score=109.71 Aligned_cols=109 Identities=12% Similarity=0.039 Sum_probs=89.8
Q ss_pred HHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCC
Q 041509 34 ALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFRE 111 (211)
Q Consensus 34 ~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~ 111 (211)
......++.+|||+ |||+|..+..++....+ .++|+++|+++++++.|++++. +. .+++++.+|+.+.. ...++
T Consensus 31 ~~~~~~~~~~vLDi-G~G~G~~~~~l~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~-~~~~~ 106 (219)
T 3dh0_A 31 KEFGLKEGMTVLDV-GTGAGFYLPYLSKMVGE-KGKVYAIDVQEEMVNYAWEKVNKLGL-KNVEVLKSEENKIP-LPDNT 106 (219)
T ss_dssp HHHTCCTTCEEEES-SCTTCTTHHHHHHHHTT-TCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECBTTBCS-SCSSC
T ss_pred HHhCCCCCCEEEEE-ecCCCHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEecccccCC-CCCCC
Confidence 33456677899999 99999999999988643 6799999999999999999987 43 47999999997652 22578
Q ss_pred ccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 112 ADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 112 fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
||+|++.... .+....++.+.+.|+|||.+++.+.
T Consensus 107 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 144 (219)
T 3dh0_A 107 VDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDW 144 (219)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 9999987643 3568899999999999998888764
No 115
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.45 E-value=5e-13 Score=122.23 Aligned_cols=127 Identities=13% Similarity=0.090 Sum_probs=101.2
Q ss_pred CcCCChhHHHHHHHHHhhC--CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEE
Q 041509 21 QKAKEPNEAEFISALAAGN--NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEF 96 (211)
Q Consensus 21 ~~~~~~~~~~lL~~l~~~~--~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~ 96 (211)
...++.....++..++... ++.+|||+ |||+|..|+.||+.++. .++|+++|+++++++.+++|++ +. .+|++
T Consensus 96 ~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl-~aGpG~kt~~lA~~~~~-~g~V~avDis~~~l~~~~~n~~r~g~-~nv~~ 172 (479)
T 2frx_A 96 LFYIQEASSMLPVAALFADGNAPQRVMDV-AAAPGSKTTQISARMNN-EGAILANEFSASRVKVLHANISRCGI-SNVAL 172 (479)
T ss_dssp SEEECCHHHHHHHHHHTTTTCCCSEEEES-SCTTSHHHHHHHHHTTT-CSEEEEECSSHHHHHHHHHHHHHHTC-CSEEE
T ss_pred EEEEECHHHHHHHHHhCcccCCCCEEEEe-CCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEE
Confidence 3345566666666666666 78899999 79999999999998753 6899999999999999999998 54 57999
Q ss_pred EEcchHHHhhhccCCccEEEEcCCcC-------------------------cHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 97 VIGDAQSLLLSHFREADFVLIDCNLE-------------------------NHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 97 ~~gda~e~l~~l~~~fD~VfiD~~~~-------------------------~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
+++|+.+......+.||.|++|++-. .+.++++.+.++|+|||.++.+...+.+
T Consensus 173 ~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~ 251 (479)
T 2frx_A 173 THFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQ 251 (479)
T ss_dssp ECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSS
T ss_pred EeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCc
Confidence 99999887543467899999996421 0246788889999999998887766654
No 116
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.45 E-value=4.8e-13 Score=110.36 Aligned_cols=115 Identities=15% Similarity=0.084 Sum_probs=92.0
Q ss_pred HHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhh
Q 041509 28 EAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLL 106 (211)
Q Consensus 28 ~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~ 106 (211)
....+..+....++.+|||+ |||+|..+..++.. ..+|+++|+++++++.|++++. ....+++++.+|+.+. +
T Consensus 9 ~~~~~~~~~~~~~~~~vLDi-GcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~ 82 (239)
T 1xxl_A 9 SLGLMIKTAECRAEHRVLDI-GAGAGHTALAFSPY----VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL-P 82 (239)
T ss_dssp HHHHHHHHHTCCTTCEEEEE-SCTTSHHHHHHGGG----SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC-C
T ss_pred CcchHHHHhCcCCCCEEEEE-ccCcCHHHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC-C
Confidence 34445555577788999999 99999999988865 3599999999999999999987 2235799999999764 4
Q ss_pred hccCCccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 107 SHFREADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 107 ~l~~~fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
...++||+|+..... .+....++.+.+.|+|||.+++.+...
T Consensus 83 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 83 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 225789999987543 367889999999999999888877544
No 117
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.45 E-value=3.2e-13 Score=113.16 Aligned_cols=112 Identities=17% Similarity=0.154 Sum_probs=90.3
Q ss_pred HHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhhc
Q 041509 30 EFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 30 ~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~l 108 (211)
+++.......++.+|||+ |||+|..+..++...+ +++|+++|+++.+++.|++++. ....+++++.+|+.+... .
T Consensus 27 ~~l~~~~~~~~~~~vLDi-G~G~G~~~~~l~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~ 102 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEA-GCGIGAQTVILAKNNP--DAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPF-E 102 (276)
T ss_dssp HHHHTTCCCCTTCEEEET-TCTTSHHHHHHHHHCT--TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCS-C
T ss_pred HHHhhcccCCCCCeEEEe-cCCCCHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCC-C
Confidence 333333334577899999 9999999999998753 6899999999999999999987 333579999999987532 2
Q ss_pred cCCccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 109 FREADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 109 ~~~fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.++||+|++.... .+....++.+.+.|+|||.+++.+
T Consensus 103 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 103 DSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 6799999987533 356789999999999999888876
No 118
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.44 E-value=9.6e-13 Score=112.82 Aligned_cols=101 Identities=8% Similarity=-0.011 Sum_probs=85.8
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++.+|||+ |||+|..+..+++.. +.+|+++|+++++++.|++++. ++.++++++.+|+.+. .++||+|
T Consensus 88 ~~~~~~vLDi-GcG~G~~~~~la~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~fD~v 159 (318)
T 2fk8_A 88 LKPGMTLLDI-GCGWGTTMRRAVERF---DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF----AEPVDRI 159 (318)
T ss_dssp CCTTCEEEEE-SCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC----CCCCSEE
T ss_pred CCCcCEEEEE-cccchHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC----CCCcCEE
Confidence 3467799999 999999999999875 4699999999999999999987 5567899999998764 3789999
Q ss_pred EEcCC-----cCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCN-----LENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~-----~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+.... .+++..+++.+.+.|+|||.+++.+.
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 98742 24678999999999999998888663
No 119
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.44 E-value=3.4e-13 Score=119.69 Aligned_cols=115 Identities=17% Similarity=0.066 Sum_probs=91.7
Q ss_pred HHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCC--CcEEEEEcchHHHh
Q 041509 30 EFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDA--SHVEFVIGDAQSLL 105 (211)
Q Consensus 30 ~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~--~~V~~~~gda~e~l 105 (211)
+++.......++.+|||+ |||+|..++.++...+ +.+|++||+++.+++.|++|++ +.. .+++|+.+|+.+.+
T Consensus 212 ~~ll~~l~~~~~~~VLDl-GcG~G~~s~~la~~~p--~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~ 288 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDL-GCGNGVIGLTLLDKNP--QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV 288 (375)
T ss_dssp HHHHHTCCCSCCSEEEEE-TCTTCHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC
T ss_pred HHHHHhCcccCCCeEEEE-eCcchHHHHHHHHHCC--CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC
Confidence 344444444556899999 9999999999998863 6899999999999999999998 433 36999999998854
Q ss_pred hhccCCccEEEEcCCc--------CcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 106 LSHFREADFVLIDCNL--------ENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 106 ~~l~~~fD~VfiD~~~--------~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
+ .++||+|+++... ....++++.+.+.|+|||.++++.|...
T Consensus 289 ~--~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 289 E--PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp C--TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred C--CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 3 5799999998652 2235789999999999999988777544
No 120
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.44 E-value=3.4e-13 Score=110.22 Aligned_cols=101 Identities=14% Similarity=0.100 Sum_probs=79.5
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH---hhhccCCccEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL---LLSHFREADFV 115 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~---l~~l~~~fD~V 115 (211)
.++.+|||+ |||+|+.+..++...+ +++|+++|+++++++.+.+..+. ..+++++.+|+.+. .+ +.++||+|
T Consensus 56 ~~g~~VLDl-GcGtG~~~~~la~~~~--~~~V~gvD~s~~~l~~~~~~a~~-~~~v~~~~~d~~~~~~~~~-~~~~fD~V 130 (210)
T 1nt2_A 56 RGDERVLYL-GAASGTTVSHLADIVD--EGIIYAVEYSAKPFEKLLELVRE-RNNIIPLLFDASKPWKYSG-IVEKVDLI 130 (210)
T ss_dssp CSSCEEEEE-TCTTSHHHHHHHHHTT--TSEEEEECCCHHHHHHHHHHHHH-CSSEEEECSCTTCGGGTTT-TCCCEEEE
T ss_pred CCCCEEEEE-CCcCCHHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCchhhcc-cccceeEE
Confidence 466799999 9999999999998874 58999999999987666655442 24799999998764 22 24789999
Q ss_pred EEcCCcCc-HHHHHHHHHhcCCCCcEEEEE
Q 041509 116 LIDCNLEN-HEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~~~-y~~~l~~~~~~L~pgG~viv~ 144 (211)
+++..... ....++.+.+.|+|||.+++.
T Consensus 131 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 131 YQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 99965443 334589999999999988875
No 121
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.44 E-value=9.5e-13 Score=112.02 Aligned_cols=116 Identities=14% Similarity=0.122 Sum_probs=93.0
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC---CCCcEEEEEcc
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL---DASHVEFVIGD 100 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~---~~~~V~~~~gd 100 (211)
..+...++|..+.. .++.+|||+ |||+|..+..++..++ .+.+|+++|+++.+++.|+++++. ...+++++++|
T Consensus 21 y~~~~~~~l~~~~~-~~~~~vLDi-GcG~G~~~~~la~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 97 (299)
T 3g5t_A 21 YPSDFYKMIDEYHD-GERKLLVDV-GCGPGTATLQMAQELK-PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISS 97 (299)
T ss_dssp CCHHHHHHHHHHCC-SCCSEEEEE-TCTTTHHHHHHHHHSS-CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECC
T ss_pred CCHHHHHHHHHHhc-CCCCEEEEE-CCCCCHHHHHHHHhCC-CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcC
Confidence 34555556655533 467899999 9999999999998763 378999999999999999999872 36789999999
Q ss_pred hHHHhhhcc------CCccEEEEcCCcC--cHHHHHHHHHhcCCCCcEEEE
Q 041509 101 AQSLLLSHF------READFVLIDCNLE--NHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 101 a~e~l~~l~------~~fD~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv 143 (211)
+.+... .. ++||+|+...... +....++.+.+.|+|||.+++
T Consensus 98 ~~~~~~-~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 98 SDDFKF-LGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTCCGG-GCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred HHhCCc-cccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 987532 24 7999999875322 678899999999999988877
No 122
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.44 E-value=5.9e-13 Score=111.11 Aligned_cols=104 Identities=10% Similarity=0.034 Sum_probs=79.8
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhh--hccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLL--SHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~--~l~~~fD~V 115 (211)
..++.+|||+ |||+|+.|..+|..+.+ .|+|+++|+++.+++...+..+. ..+|+++.+|+..... .+.++||+|
T Consensus 74 l~~g~~VLDl-G~GtG~~t~~la~~v~~-~G~V~avD~s~~~l~~l~~~a~~-r~nv~~i~~Da~~~~~~~~~~~~~D~I 150 (232)
T 3id6_C 74 IRKGTKVLYL-GAASGTTISHVSDIIEL-NGKAYGVEFSPRVVRELLLVAQR-RPNIFPLLADARFPQSYKSVVENVDVL 150 (232)
T ss_dssp CCTTCEEEEE-TCTTSHHHHHHHHHHTT-TSEEEEEECCHHHHHHHHHHHHH-CTTEEEEECCTTCGGGTTTTCCCEEEE
T ss_pred CCCCCEEEEE-eecCCHHHHHHHHHhCC-CCEEEEEECcHHHHHHHHHHhhh-cCCeEEEEcccccchhhhccccceEEE
Confidence 5678899999 89999999999998754 79999999999886544333331 2579999999975422 235789999
Q ss_pred EEcCCcCcHHHHHH-HHHhcCCCCcEEEEE
Q 041509 116 LIDCNLENHEGVLR-AVQAGNKPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~~~y~~~l~-~~~~~L~pgG~viv~ 144 (211)
|+|....+..+.+. .+.+.|+|||.+++.
T Consensus 151 ~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 151 YVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 99988776665554 445589999988875
No 123
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.44 E-value=7.1e-13 Score=111.42 Aligned_cols=111 Identities=8% Similarity=-0.036 Sum_probs=88.9
Q ss_pred HHHHHhhC-CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc
Q 041509 32 ISALAAGN-NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 32 L~~l~~~~-~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l 108 (211)
|..++... ++.+|||| |||+|+.++.++... +.++|+++|++|.+++.|++|++ ++.++|+++.||..+.+..
T Consensus 12 L~~i~~~v~~g~~VlDI-GtGsG~l~i~la~~~--~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~- 87 (244)
T 3gnl_A 12 LEKVASYITKNERIADI-GSDHAYLPCFAVKNQ--TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK- 87 (244)
T ss_dssp HHHHHTTCCSSEEEEEE-TCSTTHHHHHHHHTT--SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-
T ss_pred HHHHHHhCCCCCEEEEE-CCccHHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc-
Confidence 44444444 45689999 999999999999763 25799999999999999999998 6778899999999987653
Q ss_pred cCCccEEEEcCCc-CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 109 FREADFVLIDCNL-ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 109 ~~~fD~VfiD~~~-~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
.++||.|++.+.- ....+.++...+.|++++.+++.-+
T Consensus 88 ~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 88 KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 3469999985433 3467788888888998888887665
No 124
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.43 E-value=1e-12 Score=110.89 Aligned_cols=109 Identities=9% Similarity=0.059 Sum_probs=87.5
Q ss_pred HHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhcc
Q 041509 30 EFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHF 109 (211)
Q Consensus 30 ~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~ 109 (211)
.++..+ ...++.+|||+ |||+|..+.+++.. +.+|+++|+++.+++.|++++....-+++++.+|+.+... .
T Consensus 111 ~~~~~~-~~~~~~~vLD~-GcG~G~~~~~l~~~----g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~--~ 182 (286)
T 3m70_A 111 DVVDAA-KIISPCKVLDL-GCGQGRNSLYLSLL----GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI--Q 182 (286)
T ss_dssp HHHHHH-HHSCSCEEEEE-SCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC--C
T ss_pred HHHHHh-hccCCCcEEEE-CCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc--c
Confidence 344433 34478899999 99999999999875 5699999999999999999988211289999999987543 6
Q ss_pred CCccEEEEcCC-----cCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 110 READFVLIDCN-----LENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 110 ~~fD~VfiD~~-----~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
++||+|+.... .+....+++.+.+.|+|||.+++...
T Consensus 183 ~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 183 ENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp SCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 89999998763 34567899999999999998666554
No 125
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.43 E-value=1e-12 Score=118.81 Aligned_cols=119 Identities=11% Similarity=0.004 Sum_probs=89.3
Q ss_pred hhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHH-------HHHhc--CC-CCcEE
Q 041509 26 PNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLS-------KKILG--LD-ASHVE 95 (211)
Q Consensus 26 ~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~A-------r~~~~--~~-~~~V~ 95 (211)
|.....+...+...++.+|||+ |||+|+.++.+|...+ ..+|++||+++++++.| +++++ ++ ..+|+
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDL-GCGsG~la~~LA~~~g--~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~ 304 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDL-GSGVGNCVVQAALECG--CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVE 304 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEE-SCTTSHHHHHHHHHHC--CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEe-CCCcCHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceE
Confidence 4443333344456678899999 9999999999998763 46899999999999999 88887 43 37899
Q ss_pred EEEcchHHH---hhhccCCccEEEEcCC--cCcHHHHHHHHHhcCCCCcEEEEEecC
Q 041509 96 FVIGDAQSL---LLSHFREADFVLIDCN--LENHEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 96 ~~~gda~e~---l~~l~~~fD~VfiD~~--~~~y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
+++||.... ++...++||+|++... ..+....++.+.+.|+|||.+++.+..
T Consensus 305 ~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 305 FSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp EEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred EEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 999876421 2222468999998632 245677889999999999988775543
No 126
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.42 E-value=3.6e-13 Score=111.46 Aligned_cols=118 Identities=10% Similarity=0.056 Sum_probs=93.1
Q ss_pred CCChhHHHHHHHHHh---hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEc
Q 041509 23 AKEPNEAEFISALAA---GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIG 99 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~---~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~g 99 (211)
...+...+.+..++. ..++.+|||+ |||+|..+..++... +.+|+++|+++++++.|++++... .+++++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~vLdi-G~G~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~ 109 (266)
T 3ujc_A 35 YISSGGLEATKKILSDIELNENSKVLDI-GSGLGGGCMYINEKY---GAHTHGIDICSNIVNMANERVSGN-NKIIFEAN 109 (266)
T ss_dssp CCSTTHHHHHHHHTTTCCCCTTCEEEEE-TCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHTCCSC-TTEEEEEC
T ss_pred ccccchHHHHHHHHHhcCCCCCCEEEEE-CCCCCHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEEC
Confidence 344444444444433 4467799999 999999999999875 579999999999999999988743 78999999
Q ss_pred chHHHhhhccCCccEEEEcCCc-----CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 100 DAQSLLLSHFREADFVLIDCNL-----ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 100 da~e~l~~l~~~fD~VfiD~~~-----~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|+.+. +...++||+|+..... .+...+++.+.+.|+|||.+++.+.
T Consensus 110 d~~~~-~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 110 DILTK-EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp CTTTC-CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccC-CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 99875 3226799999987532 4568899999999999998888764
No 127
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.42 E-value=4.6e-13 Score=111.43 Aligned_cols=105 Identities=8% Similarity=-0.061 Sum_probs=82.9
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-------CCCCcEEEEEcchHHHhhh-c-c
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-------LDASHVEFVIGDAQSLLLS-H-F 109 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-------~~~~~V~~~~gda~e~l~~-l-~ 109 (211)
.+..+|||| |||+|..++.||...+ +..|++||+++.+++.|+++++ ....+|+++.+|+.+.++. + .
T Consensus 45 ~~~~~vLDi-GcG~G~~~~~la~~~p--~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 45 QAQVEFADI-GCGYGGLLVELSPLFP--DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp -CCEEEEEE-TCTTCHHHHHHGGGST--TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCT
T ss_pred CCCCeEEEE-ccCCcHHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCC
Confidence 455689999 9999999999998753 6899999999999999998764 2246899999999885552 2 5
Q ss_pred CCccEEEEcCCcCc-----------HHHHHHHHHhcCCCCcEEEEEec
Q 041509 110 READFVLIDCNLEN-----------HEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 110 ~~fD~VfiD~~~~~-----------y~~~l~~~~~~L~pgG~viv~dn 146 (211)
++||.|++...... +..+++.+.+.|+|||.+++..+
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 78999998643221 25799999999999998877543
No 128
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.42 E-value=2.8e-12 Score=109.54 Aligned_cols=114 Identities=9% Similarity=0.038 Sum_probs=88.1
Q ss_pred CChhHHHHHHHHHh---hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEE
Q 041509 24 KEPNEAEFISALAA---GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVI 98 (211)
Q Consensus 24 ~~~~~~~lL~~l~~---~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~ 98 (211)
..|++..++..+.. ..++.+|||+ |||+|..++.++.. + +.+|+++|+++++++.|++|++ ++.++++|++
T Consensus 104 pr~~te~lv~~~l~~~~~~~~~~vLDl-G~GsG~~~~~la~~-~--~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~ 179 (284)
T 1nv8_A 104 PRPETEELVELALELIRKYGIKTVADI-GTGSGAIGVSVAKF-S--DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRK 179 (284)
T ss_dssp CCTTHHHHHHHHHHHHHHHTCCEEEEE-SCTTSHHHHHHHHH-S--SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred cChhHHHHHHHHHHHhcccCCCEEEEE-eCchhHHHHHHHHC-C--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 34555555444433 2356799999 89999999999987 3 6899999999999999999998 5566799999
Q ss_pred cchHHHhhhccCCc---cEEEEcCCcCc----------H------------HHHHHHHH-hcCCCCcEEEEE
Q 041509 99 GDAQSLLLSHFREA---DFVLIDCNLEN----------H------------EGVLRAVQ-AGNKPNGAVVVG 144 (211)
Q Consensus 99 gda~e~l~~l~~~f---D~VfiD~~~~~----------y------------~~~l~~~~-~~L~pgG~viv~ 144 (211)
+|+.+.++ ++| |+|+.+.+-.. | ...++.+. +.|+|||.+++.
T Consensus 180 ~D~~~~~~---~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 180 GEFLEPFK---EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp SSTTGGGG---GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred Ccchhhcc---cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 99988654 468 99999843110 1 26788999 999998887763
No 129
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.42 E-value=7.5e-13 Score=109.99 Aligned_cols=103 Identities=12% Similarity=0.030 Sum_probs=83.9
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-C--------CCCcEEEEEcchHHHhhhc--
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-L--------DASHVEFVIGDAQSLLLSH-- 108 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~--------~~~~V~~~~gda~e~l~~l-- 108 (211)
+..+|||| |||+|..++.++...+ +.+|++||+++.+++.|+++++ . ...+++++.+|+.+.++..
T Consensus 49 ~~~~vLDi-GcG~G~~~~~la~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 49 KKVTIADI-GCGFGGLMIDLSPAFP--EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp CCEEEEEE-TCTTSHHHHHHHHHST--TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC
T ss_pred CCCEEEEE-cCCCCHHHHHHHHhCC--CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc
Confidence 56789999 9999999999998863 5799999999999999999876 2 2368999999998866532
Q ss_pred cCCccEEEEcCCcCc-----------HHHHHHHHHhcCCCCcEEEEEe
Q 041509 109 FREADFVLIDCNLEN-----------HEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 109 ~~~fD~VfiD~~~~~-----------y~~~l~~~~~~L~pgG~viv~d 145 (211)
.+.+|.|++...... +..+++.+.++|+|||.+++..
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 568999987643322 2589999999999998887754
No 130
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.41 E-value=4.2e-13 Score=110.43 Aligned_cols=106 Identities=20% Similarity=0.208 Sum_probs=84.0
Q ss_pred HHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc
Q 041509 31 FISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 31 lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l 108 (211)
++..+....++.+|||+ |||+|..++.++.. +++|+++|+++.+++.|+++++ +..++++++++|+.+..+
T Consensus 69 l~~~~~~~~~~~~vLD~-gcG~G~~~~~la~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 141 (241)
T 3gdh_A 69 IAGRVSQSFKCDVVVDA-FCGVGGNTIQFALT----GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS-- 141 (241)
T ss_dssp HHHHHHHHSCCSEEEET-TCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--
T ss_pred HHHHhhhccCCCEEEEC-ccccCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--
Confidence 34444445578899999 99999999999974 5899999999999999999998 545789999999998763
Q ss_pred cCCccEEEEcCCcCc---HHHHHHHHHhcCCCCcEEEE
Q 041509 109 FREADFVLIDCNLEN---HEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 109 ~~~fD~VfiD~~~~~---y~~~l~~~~~~L~pgG~viv 143 (211)
.++||+|+++..... ....+..+.+.|+|||.+++
T Consensus 142 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 142 FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHH
T ss_pred cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHH
Confidence 579999999975432 22245566778999887544
No 131
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.41 E-value=9.1e-13 Score=108.30 Aligned_cols=105 Identities=11% Similarity=0.038 Sum_probs=82.9
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH--hhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL--LLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~--l~~l~~~fD~V 115 (211)
..+..+|||+ |||+|..+.+++....+ +++|+++|+++++++.+.++.+.. .+++++.+|+.+. ++...++||+|
T Consensus 75 ~~~~~~vLDl-G~G~G~~~~~la~~~g~-~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V 151 (233)
T 2ipx_A 75 IKPGAKVLYL-GAASGTTVSHVSDIVGP-DGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVI 151 (233)
T ss_dssp CCTTCEEEEE-CCTTSHHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEE
T ss_pred CCCCCEEEEE-cccCCHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEE
Confidence 3456799999 99999999999988632 589999999999887777776622 6799999999874 33336799999
Q ss_pred EEcCCcCc-HHHHHHHHHhcCCCCcEEEEEe
Q 041509 116 LIDCNLEN-HEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 116 fiD~~~~~-y~~~l~~~~~~L~pgG~viv~d 145 (211)
++|....+ ...+++.+.+.|+|||.+++.-
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 152 FADVAQPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCCccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 99976443 3456888999999988887743
No 132
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.41 E-value=6.7e-13 Score=114.41 Aligned_cols=104 Identities=15% Similarity=0.103 Sum_probs=84.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-----CCCCcEEEEEcchHHHhhh-ccCCc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-----LDASHVEFVIGDAQSLLLS-HFREA 112 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-----~~~~~V~~~~gda~e~l~~-l~~~f 112 (211)
.++++|||| |||+|..+..+++.. +..+|++||+|+++++.|++++. ....+++++.+|+.+.+.. ..++|
T Consensus 94 ~~~~~VLdi-G~G~G~~~~~l~~~~--~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~f 170 (304)
T 3bwc_A 94 PKPERVLII-GGGDGGVLREVLRHG--TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTY 170 (304)
T ss_dssp SSCCEEEEE-ECTTSHHHHHHHTCT--TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCE
T ss_pred CCCCeEEEE-cCCCCHHHHHHHhCC--CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCce
Confidence 578899999 999999999998653 25799999999999999999983 2256899999999998754 26799
Q ss_pred cEEEEcCCcCc------H-HHHHHHHHhcCCCCcEEEEEe
Q 041509 113 DFVLIDCNLEN------H-EGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 113 D~VfiD~~~~~------y-~~~l~~~~~~L~pgG~viv~d 145 (211)
|+|++|..... | .++++.+.+.|+|||.+++..
T Consensus 171 DvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 171 DVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99999974321 1 688999999999988877643
No 133
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.41 E-value=3.8e-13 Score=110.19 Aligned_cols=116 Identities=13% Similarity=0.075 Sum_probs=88.0
Q ss_pred ChhHHH-HHHHHH-hhCCCCeEEEEccccHHHHHHHHHHHccC----CCcEEEEEeCChhHHHHHHHHhc--CC----CC
Q 041509 25 EPNEAE-FISALA-AGNNAQLMVVACANVANATTLALAAAAHQ----TGGRVVCILRRVEEYKLSKKILG--LD----AS 92 (211)
Q Consensus 25 ~~~~~~-lL~~l~-~~~~~~~VLEi~Gtg~G~stl~la~a~~~----~~g~v~tiE~~~~~~~~Ar~~~~--~~----~~ 92 (211)
.|.... ++..+. ...+..+|||+ |||+|+.+..+++..+. ..++|+++|+++++++.|++++. +. ..
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdi-G~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 145 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDV-GSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG 145 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEE-SCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEE-CCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCC
Confidence 455433 444443 34566799999 99999999999986531 02699999999999999999987 31 46
Q ss_pred cEEEEEcchHHHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 93 HVEFVIGDAQSLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 93 ~V~~~~gda~e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+++++.+|+.+.++. .++||+|+++...... .+.+.+.|+|||.+++.-
T Consensus 146 ~v~~~~~d~~~~~~~-~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 146 QLLIVEGDGRKGYPP-NAPYNAIHVGAAAPDT---PTELINQLASGGRLIVPV 194 (227)
T ss_dssp SEEEEESCGGGCCGG-GCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEEE
T ss_pred ceEEEECCcccCCCc-CCCccEEEECCchHHH---HHHHHHHhcCCCEEEEEE
Confidence 899999999875442 4789999999876643 467788899988887754
No 134
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.40 E-value=5.8e-13 Score=113.67 Aligned_cols=103 Identities=18% Similarity=0.142 Sum_probs=82.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCC-------------------------
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDA------------------------- 91 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~------------------------- 91 (211)
.++++|||| |||+|..++.|+...+ +.+|++||+++.+++.|++++. +..
T Consensus 45 ~~~~~VLDi-GCG~G~~~~~la~~~~--~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (292)
T 3g07_A 45 FRGRDVLDL-GCNVGHLTLSIACKWG--PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVR 121 (292)
T ss_dssp TTTSEEEEE-SCTTCHHHHHHHHHTC--CSEEEEEESCHHHHHHHHHTC-------------------------------
T ss_pred cCCCcEEEe-CCCCCHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccc
Confidence 367899999 9999999999999874 5799999999999999999876 211
Q ss_pred --------------------------------CcEEEEEcchHHHh----hhccCCccEEEEcCCc---------CcHHH
Q 041509 92 --------------------------------SHVEFVIGDAQSLL----LSHFREADFVLIDCNL---------ENHEG 126 (211)
Q Consensus 92 --------------------------------~~V~~~~gda~e~l----~~l~~~fD~VfiD~~~---------~~y~~ 126 (211)
.+|+|+++|..+.. +...++||+|+...-. ....+
T Consensus 122 ~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 122 KRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp --------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 58999999986432 2226799999987643 14577
Q ss_pred HHHHHHhcCCCCcEEEEE
Q 041509 127 VLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 127 ~l~~~~~~L~pgG~viv~ 144 (211)
+++.+.++|+|||.+++.
T Consensus 202 ~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 202 MFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhCCCcEEEEe
Confidence 899999999998877774
No 135
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.40 E-value=9.8e-13 Score=106.36 Aligned_cols=112 Identities=14% Similarity=0.104 Sum_probs=89.3
Q ss_pred hhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHh
Q 041509 26 PNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLL 105 (211)
Q Consensus 26 ~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l 105 (211)
.....++..+. ..++.+|||+ |||+|..+..++.. +.+++++|+++++++.|++++. .+++++.+|+.+..
T Consensus 32 ~~~~~~l~~~~-~~~~~~vLDi-GcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~ 102 (220)
T 3hnr_A 32 AHYEDILEDVV-NKSFGNVLEF-GVGTGNLTNKLLLA----GRTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFE 102 (220)
T ss_dssp TTHHHHHHHHH-HTCCSEEEEE-CCTTSHHHHHHHHT----TCEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCC
T ss_pred HHHHHHHHHhh-ccCCCeEEEe-CCCCCHHHHHHHhC----CCeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcC
Confidence 34455666654 3477899999 99999999999874 5799999999999999999866 57999999998753
Q ss_pred hhccCCccEEEEcCCcC---cH--HHHHHHHHhcCCCCcEEEEEecCC
Q 041509 106 LSHFREADFVLIDCNLE---NH--EGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 106 ~~l~~~fD~VfiD~~~~---~y--~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
. .++||+|++..... +. ...++.+.+.|+|||.+++.+...
T Consensus 103 ~--~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 103 V--PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp C--CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred C--CCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 2 38999999986443 22 338999999999999998876443
No 136
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.39 E-value=1.5e-12 Score=117.96 Aligned_cols=126 Identities=17% Similarity=0.133 Sum_probs=100.3
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcch
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDA 101 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda 101 (211)
.++.....++..++...++.+|||+ |||+|..|+.++..++. .++|+++|+++.+++.+++|++ ....+++++++|+
T Consensus 242 ~~qd~~s~l~~~~l~~~~g~~VLDl-gaG~G~~t~~la~~~~~-~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~ 319 (450)
T 2yxl_A 242 IVQEEASAVASIVLDPKPGETVVDL-AAAPGGKTTHLAELMKN-KGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDA 319 (450)
T ss_dssp EECCHHHHHHHHHHCCCTTCEEEES-SCTTCHHHHHHHHHTTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCT
T ss_pred EecCchhHHHHHhcCCCCcCEEEEe-CCCccHHHHHHHHHcCC-CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcCh
Confidence 3555666777777777788899999 79999999999998742 4899999999999999999998 2235799999999
Q ss_pred HHHhhhcc-CCccEEEEcCCcCc-------------------------HHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 102 QSLLLSHF-READFVLIDCNLEN-------------------------HEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 102 ~e~l~~l~-~~fD~VfiD~~~~~-------------------------y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
.+..+.+. ++||.|++|++-.. ..++++.+.++|+|||.+++++..+.+
T Consensus 320 ~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 320 RKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp TCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred hhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh
Confidence 87643233 68999999864310 156899999999999999887776654
No 137
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.39 E-value=7.5e-13 Score=117.78 Aligned_cols=120 Identities=18% Similarity=0.194 Sum_probs=94.2
Q ss_pred CChhHHHHHHHHHhh-----CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEE
Q 041509 24 KEPNEAEFISALAAG-----NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVI 98 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~-----~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~ 98 (211)
+.+....++..+... .++.+|||+ |||+|..++.++.. +.+|++||+++.+++.|++|+....-.+++++
T Consensus 212 ~d~~t~~ll~~l~~~l~~~~~~~~~VLDl-GcG~G~~~~~la~~----g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~ 286 (381)
T 3dmg_A 212 VDPASLLLLEALQERLGPEGVRGRQVLDL-GAGYGALTLPLARM----GAEVVGVEDDLASVLSLQKGLEANALKAQALH 286 (381)
T ss_dssp CCHHHHHHHHHHHHHHCTTTTTTCEEEEE-TCTTSTTHHHHHHT----TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCHHHHHHHHHHHHhhcccCCCCCEEEEE-eeeCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEE
Confidence 445555566655443 356799999 99999999999875 56999999999999999999982222489999
Q ss_pred cchHHHhhhccCCccEEEEcCCc--------CcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 99 GDAQSLLLSHFREADFVLIDCNL--------ENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 99 gda~e~l~~l~~~fD~VfiD~~~--------~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
+|+.+.... .++||+|+++... .....+++.+.+.|+|||.+++..|...
T Consensus 287 ~D~~~~~~~-~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 287 SDVDEALTE-EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp CSTTTTSCT-TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred cchhhcccc-CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 999887543 5799999998532 2457889999999999999998777544
No 138
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.39 E-value=1.5e-12 Score=114.97 Aligned_cols=103 Identities=16% Similarity=0.067 Sum_probs=82.1
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC-----CC----CcEEEEEcchHHHhhhc--
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL-----DA----SHVEFVIGDAQSLLLSH-- 108 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~-----~~----~~V~~~~gda~e~l~~l-- 108 (211)
+|++||+| |+|+|+++..+++.. ..+|++||+||++++.||+++.. +. ++++++++|+.+.+...
T Consensus 188 ~pkrVL~I-GgG~G~~arellk~~---~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~ 263 (364)
T 2qfm_A 188 TGKDVLIL-GGGDGGILCEIVKLK---PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 263 (364)
T ss_dssp TTCEEEEE-ECTTCHHHHHHHTTC---CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEE-ECChhHHHHHHHHCC---CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc
Confidence 68999999 999999988887642 37999999999999999999861 22 27999999999998753
Q ss_pred -cCCccEEEEcCCc-C--------cHHHHHHHH----HhcCCCCcEEEEEec
Q 041509 109 -FREADFVLIDCNL-E--------NHEGVLRAV----QAGNKPNGAVVVGYN 146 (211)
Q Consensus 109 -~~~fD~VfiD~~~-~--------~y~~~l~~~----~~~L~pgG~viv~dn 146 (211)
.++||+||+|+.. + ...++++.+ .+.|+|||.+++..+
T Consensus 264 ~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 264 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 5799999999753 1 225566666 899999887666443
No 139
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.39 E-value=8.6e-13 Score=109.65 Aligned_cols=91 Identities=13% Similarity=0.031 Sum_probs=71.9
Q ss_pred hhHHHHHHHHHhhC-----CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEE
Q 041509 26 PNEAEFISALAAGN-----NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVI 98 (211)
Q Consensus 26 ~~~~~lL~~l~~~~-----~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~ 98 (211)
+....++..++... ++.+|||+ |||+|..++.++...+ +++|+++|+++++++.|+++++ ++.+++++++
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDl-G~G~G~~~~~la~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 122 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDI-GTGASCIYPLLGATLN--GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVK 122 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEE-SCTTTTHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEe-CCChhHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEE
Confidence 44555666665533 45689999 9999999999988764 5899999999999999999998 5567799999
Q ss_pred cchHH-Hhhhcc----CCccEEEEcC
Q 041509 99 GDAQS-LLLSHF----READFVLIDC 119 (211)
Q Consensus 99 gda~e-~l~~l~----~~fD~VfiD~ 119 (211)
+|+.+ .+..+. ++||+|+.+.
T Consensus 123 ~d~~~~~~~~~~~~~~~~fD~i~~np 148 (254)
T 2h00_A 123 VPQKTLLMDALKEESEIIYDFCMCNP 148 (254)
T ss_dssp CCTTCSSTTTSTTCCSCCBSEEEECC
T ss_pred cchhhhhhhhhhcccCCcccEEEECC
Confidence 99876 232222 5899999984
No 140
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.39 E-value=2.1e-12 Score=108.23 Aligned_cols=99 Identities=12% Similarity=0.126 Sum_probs=83.4
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
.++++|||+ |||+|..++.++.. +.+|+++|++|.+++.|++|++ .... ++++.+|+.+.++ .++||+|+.
T Consensus 119 ~~~~~VLDi-GcG~G~l~~~la~~----g~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~--~~~fD~Vv~ 190 (254)
T 2nxc_A 119 RPGDKVLDL-GTGSGVLAIAAEKL----GGKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALP--FGPFDLLVA 190 (254)
T ss_dssp CTTCEEEEE-TCTTSHHHHHHHHT----TCEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGG--GCCEEEEEE
T ss_pred CCCCEEEEe-cCCCcHHHHHHHHh----CCeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCc--CCCCCEEEE
Confidence 567899999 99999999988763 3499999999999999999998 3223 9999999988654 478999999
Q ss_pred cCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 118 DCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 118 D~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.........++.+.+.|+|||.+++.+
T Consensus 191 n~~~~~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 191 NLYAELHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp ECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 8766667889999999999988887754
No 141
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.39 E-value=8.1e-13 Score=106.49 Aligned_cols=153 Identities=14% Similarity=0.039 Sum_probs=103.2
Q ss_pred HHHHHHh-hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhcc
Q 041509 31 FISALAA-GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHF 109 (211)
Q Consensus 31 lL~~l~~-~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~ 109 (211)
.+..++. ..++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|++++ +++++.+|+.+.. ..
T Consensus 33 ~~~~~~~~~~~~~~vLDi-GcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~--~~ 100 (211)
T 3e23_A 33 TLTKFLGELPAGAKILEL-GCGAGYQAEAMLAA----GFDVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD--AI 100 (211)
T ss_dssp HHHHHHTTSCTTCEEEES-SCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC--CC
T ss_pred HHHHHHHhcCCCCcEEEE-CCCCCHHHHHHHHc----CCeEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC--CC
Confidence 3444433 3457799999 99999999999864 579999999999999999987 4667889988764 47
Q ss_pred CCccEEEEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEecCCCCCceec----------CCCcEEEeecCCc-EEEEE
Q 041509 110 READFVLIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYNAFRKGSWRS----------SGSKSQLLPIGEG-LLVTR 173 (211)
Q Consensus 110 ~~fD~VfiD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn~~~~~~~~~----------~~~~~v~lpig~G-l~v~~ 173 (211)
++||+|+...... +...+++.+.+.|+|||.+++............ ..+...+ -..| +.+..
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~aG~f~~~~ 178 (211)
T 3e23_A 101 DAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARY--AEAGTWASVA 178 (211)
T ss_dssp SCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHH--HHHCCCSEEE
T ss_pred CcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHH--HhCCCcEEEE
Confidence 8999999875332 567899999999999998887643222110000 0000000 1123 33333
Q ss_pred Eec---cC-CCCccceEEeccccCCcee
Q 041509 174 IAA---AS-ANKKSHWIVKVDKCTGEEH 197 (211)
Q Consensus 174 ~~~---~~-~~~~~~~~~~~~~~~~~~~ 197 (211)
... .. .+..++|+..+...+.+||
T Consensus 179 ~~~~~~~~~~~~~~~wl~~~~~~~~~~~ 206 (211)
T 3e23_A 179 VESSEGKGFDQELAQFLHVSVRKPELEH 206 (211)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECCCC--
T ss_pred EEeccCCCCCCCCceEEEEEEecCcccc
Confidence 322 22 4567899999999998876
No 142
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.39 E-value=2.7e-13 Score=114.91 Aligned_cols=95 Identities=4% Similarity=-0.033 Sum_probs=79.8
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC----C-CCcEEEEEcchHHHhhhccCCcc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL----D-ASHVEFVIGDAQSLLLSHFREAD 113 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~----~-~~~V~~~~gda~e~l~~l~~~fD 113 (211)
.++++|||| |||+|+++..+++. . ++|+++|+|+++++.|++++.. + ..+++++.+|+.+.+ ++||
T Consensus 71 ~~~~~VL~i-G~G~G~~~~~ll~~---~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD 141 (262)
T 2cmg_A 71 KELKEVLIV-DGFDLELAHQLFKY---D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYD 141 (262)
T ss_dssp SCCCEEEEE-SSCCHHHHHHHTTS---S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEE
T ss_pred CCCCEEEEE-eCCcCHHHHHHHhC---C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCC
Confidence 467899999 99999998888754 2 7999999999999999998751 2 468999999998765 7899
Q ss_pred EEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 114 FVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 114 ~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+|++|...+. .+++.+.+.|+|||.+++.
T Consensus 142 ~Ii~d~~dp~--~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 142 LIFCLQEPDI--HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp EEEESSCCCH--HHHHHHHTTEEEEEEEEEE
T ss_pred EEEECCCChH--HHHHHHHHhcCCCcEEEEE
Confidence 9999976543 4899999999998877663
No 143
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.39 E-value=5.6e-13 Score=109.32 Aligned_cols=100 Identities=15% Similarity=0.060 Sum_probs=83.7
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
++.+|||+ |||+|..+..++. .+.+|+++|+++.+++.|++++. +...+++++.+|+.+..+ .++||+|+.
T Consensus 66 ~~~~vLDi-GcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVP-GCGGGHDVVAMAS----PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--TELFDLIFD 138 (235)
T ss_dssp CCEEEEEE-TCTTCHHHHHHCB----TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--SSCEEEEEE
T ss_pred CCCCEEEe-CCCCCHHHHHHHh----CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--CCCeeEEEE
Confidence 45699999 9999999998864 37899999999999999999987 345789999999988643 569999997
Q ss_pred cCC-----cCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 118 DCN-----LENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 118 D~~-----~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
... ..+...+++.+.+.|+|||.+++.+.
T Consensus 139 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 139 YVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp ESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 542 23678899999999999998887664
No 144
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.39 E-value=6.6e-13 Score=113.64 Aligned_cols=102 Identities=12% Similarity=0.055 Sum_probs=84.8
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++++|||+ |||+|+.|+.+|... ..+|+++|+||.+++.+++|++ ++.++|+++++|+.++.+ .+.||.|
T Consensus 123 ~~~g~~VlD~-~aG~G~~~i~~a~~g---~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--~~~~D~V 196 (278)
T 3k6r_A 123 AKPDELVVDM-FAGIGHLSLPIAVYG---KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRI 196 (278)
T ss_dssp CCTTCEEEET-TCTTTTTTHHHHHHT---CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEE
T ss_pred cCCCCEEEEe-cCcCcHHHHHHHHhc---CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc--ccCCCEE
Confidence 3567899999 899999999988752 4699999999999999999998 678899999999998764 5789999
Q ss_pred EEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+++..... .++++.+.++|+|||.+.+.++
T Consensus 197 i~~~p~~~-~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 197 LMGYVVRT-HEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp EECCCSSG-GGGHHHHHHHEEEEEEEEEEEE
T ss_pred EECCCCcH-HHHHHHHHHHcCCCCEEEEEee
Confidence 99976543 3577788888999776655443
No 145
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.39 E-value=5.8e-13 Score=112.72 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=79.4
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHc------cCC----CcEEEEEeCCh--------------hHHHHHHHHhcC----
Q 041509 38 GNNAQLMVVACANVANATTLALAAAA------HQT----GGRVVCILRRV--------------EEYKLSKKILGL---- 89 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~------~~~----~g~v~tiE~~~--------------~~~~~Ar~~~~~---- 89 (211)
..++.+|||| |+|+||++++++++. .+. ..+++++|.+| +..+.|+++++.
T Consensus 58 ~~~~~~ILEi-GfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~ 136 (257)
T 2qy6_A 58 PHPLFVVAES-GFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMP 136 (257)
T ss_dssp SSSEEEEEES-CCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCS
T ss_pred CCCCCEEEEE-CCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccc
Confidence 3456789999 999999999988764 332 25899999987 444567776541
Q ss_pred --------C---CCcEEEEEcchHHHhhhccC----CccEEEEcCCc--Cc----HHHHHHHHHhcCCCCcEEE
Q 041509 90 --------D---ASHVEFVIGDAQSLLLSHFR----EADFVLIDCNL--EN----HEGVLRAVQAGNKPNGAVV 142 (211)
Q Consensus 90 --------~---~~~V~~~~gda~e~l~~l~~----~fD~VfiD~~~--~~----y~~~l~~~~~~L~pgG~vi 142 (211)
+ ..+++++.||+.+.++.+.+ +||.||+|+.. .+ +.++++.+.++|+|||.++
T Consensus 137 ~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ 210 (257)
T 2qy6_A 137 LPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 210 (257)
T ss_dssp CSEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEE
T ss_pred ccchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEE
Confidence 1 24688999999999987643 89999999732 22 6889999999999977654
No 146
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.39 E-value=7.8e-13 Score=118.18 Aligned_cols=104 Identities=10% Similarity=-0.004 Sum_probs=87.4
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCc-EEEEEcchHHHhh-hccCCccE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASH-VEFVIGDAQSLLL-SHFREADF 114 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~-V~~~~gda~e~l~-~l~~~fD~ 114 (211)
.++.+|||+ +||+|..++.+|...+ ..++|+++|+++++++.+++|++ ++.++ ++++++|+.+.+. ...++||+
T Consensus 51 ~~g~~VLDl-faGtG~~sl~aa~~~~-ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADP-LSASGIRAIRFLLETS-CVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp CSCEEEEES-SCTTSHHHHHHHHHCS-CEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCCEEEEC-CCcccHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 346789999 7999999999998653 13799999999999999999999 55566 9999999999987 66678999
Q ss_pred EEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 115 VLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 115 VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
|++|+ .....++++.+.++|+|||.+++..
T Consensus 129 V~lDP-~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDP-FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECC-CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 99998 3344678999999999988776654
No 147
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.39 E-value=1.7e-12 Score=103.81 Aligned_cols=110 Identities=15% Similarity=0.153 Sum_probs=89.4
Q ss_pred ChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH
Q 041509 25 EPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL 104 (211)
Q Consensus 25 ~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~ 104 (211)
.+...+++..+.... +.+|||+ |||+|..+..++.. +.+|+++|+++++++.|+++. .+++++++|+.+.
T Consensus 27 ~~~~~~~l~~~~~~~-~~~vLDi-GcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~ 96 (203)
T 3h2b_A 27 EDPDRVLIEPWATGV-DGVILDV-GSGTGRWTGHLASL----GHQIEGLEPATRLVELARQTH----PSVTFHHGTITDL 96 (203)
T ss_dssp TCTTHHHHHHHHHHC-CSCEEEE-TCTTCHHHHHHHHT----TCCEEEECCCHHHHHHHHHHC----TTSEEECCCGGGG
T ss_pred cHHHHHHHHHHhccC-CCeEEEe-cCCCCHHHHHHHhc----CCeEEEEeCCHHHHHHHHHhC----CCCeEEeCccccc
Confidence 344566777776554 7889999 99999999999875 569999999999999999883 3689999999875
Q ss_pred hhhccCCccEEEEcCC-----cCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 105 LLSHFREADFVLIDCN-----LENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 105 l~~l~~~fD~VfiD~~-----~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+...++||+|++... .++....++.+.+.|+|||.+++.+
T Consensus 97 -~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 97 -SDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp -GGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -ccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 323689999998652 2367899999999999999888765
No 148
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.39 E-value=2.4e-12 Score=103.47 Aligned_cols=111 Identities=21% Similarity=0.111 Sum_probs=89.5
Q ss_pred HHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhh
Q 041509 28 EAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLS 107 (211)
Q Consensus 28 ~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~ 107 (211)
...++..+....++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|++ .+ ..+++++.+|+.+..
T Consensus 34 ~~~~~~~l~~~~~~~~vLdi-G~G~G~~~~~l~~~----~~~v~~~D~s~~~~~~a~~--~~-~~~~~~~~~d~~~~~-- 103 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLEL-ASGTGYWTRHLSGL----ADRVTALDGSAEMIAEAGR--HG-LDNVEFRQQDLFDWT-- 103 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEE-SCTTSHHHHHHHHH----SSEEEEEESCHHHHHHHGG--GC-CTTEEEEECCTTSCC--
T ss_pred HHHHHHHHhcCCCCCeEEEE-CCCCCHHHHHHHhc----CCeEEEEeCCHHHHHHHHh--cC-CCCeEEEecccccCC--
Confidence 44556666556667899999 99999999999876 5799999999999999998 32 367999999998772
Q ss_pred ccCCccEEEEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 108 HFREADFVLIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 108 l~~~fD~VfiD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
..++||+|++..... .....++.+.+.|+|||.+++.+...
T Consensus 104 ~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 104 PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 368999999876432 24788999999999999888876533
No 149
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.38 E-value=1.9e-12 Score=115.08 Aligned_cols=101 Identities=17% Similarity=0.143 Sum_probs=85.3
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-C---------------CCCcEEEEEcchHH
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-L---------------DASHVEFVIGDAQS 103 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~---------------~~~~V~~~~gda~e 103 (211)
++.+|||+ |||+|..++.+|...+ +.+|+++|+++++++.|++|++ . ..++++++++|+.+
T Consensus 47 ~~~~VLDl-~aGtG~~~l~~a~~~~--~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~ 123 (378)
T 2dul_A 47 NPKIVLDA-LSATGIRGIRFALETP--AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANR 123 (378)
T ss_dssp CCSEEEES-SCTTSHHHHHHHHHSS--CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHH
T ss_pred CCCEEEEC-CCchhHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHH
Confidence 67899999 8999999999998763 4689999999999999999997 4 33459999999999
Q ss_pred HhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 104 LLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 104 ~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.+....++||+|++|+. ....++++.+.+.|+|||.+++.
T Consensus 124 ~~~~~~~~fD~I~lDP~-~~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 124 LMAERHRYFHFIDLDPF-GSPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp HHHHSTTCEEEEEECCS-SCCHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHhccCCCCEEEeCCC-CCHHHHHHHHHHhcCCCCEEEEE
Confidence 88755568999999974 33468889999999998876664
No 150
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.38 E-value=2.5e-12 Score=102.75 Aligned_cols=109 Identities=12% Similarity=0.045 Sum_probs=83.9
Q ss_pred HHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCC
Q 041509 32 ISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFRE 111 (211)
Q Consensus 32 L~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~ 111 (211)
+..++...++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|++++.....+++++.+|+.+. +...++
T Consensus 21 l~~~~~~~~~~~vLdi-GcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~ 94 (202)
T 2kw5_A 21 LVSVANQIPQGKILCL-AEGEGRNACFLASL----GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADF-DIVADA 94 (202)
T ss_dssp HHHHHHHSCSSEEEEC-CCSCTHHHHHHHTT----TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTB-SCCTTT
T ss_pred HHHHHHhCCCCCEEEE-CCCCCHhHHHHHhC----CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhc-CCCcCC
Confidence 3333343344499999 99999999888864 56999999999999999999872122799999999875 222578
Q ss_pred ccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 112 ADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 112 fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
||+|+..... .+...+++.+.+.|+|||.+++.+.
T Consensus 95 fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 95 WEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp CSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred ccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9999985432 2467889999999999998888653
No 151
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.38 E-value=1.7e-12 Score=106.11 Aligned_cols=109 Identities=12% Similarity=0.019 Sum_probs=87.4
Q ss_pred HHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhcc
Q 041509 30 EFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHF 109 (211)
Q Consensus 30 ~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~ 109 (211)
+.+..++...++.+|||+ |||+|..+..++... ..+++++|+++++++.|+++... .+++++.+|+.+. +...
T Consensus 33 ~~l~~~~~~~~~~~vLdi-G~G~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~-~~~~ 105 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDL-GCGFGWFCRWAHEHG---ASYVLGLDLSEKMLARARAAGPD--TGITYERADLDKL-HLPQ 105 (243)
T ss_dssp HHHHHHSCCCTTCEEEEE-TCTTCHHHHHHHHTT---CSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGC-CCCT
T ss_pred HHHHHhccccCCCEEEEE-cCcCCHHHHHHHHCC---CCeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhc-cCCC
Confidence 345555566678899999 999999999988751 24999999999999999988763 4799999999875 2225
Q ss_pred CCccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 110 READFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 110 ~~fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
++||+|+..... .+....++.+.+.|+|||.+++..
T Consensus 106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 789999987543 356889999999999999887754
No 152
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.38 E-value=1.9e-12 Score=107.13 Aligned_cols=101 Identities=17% Similarity=0.147 Sum_probs=83.6
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
..++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|++++.....+++++.+|+.+. +...++||+|++
T Consensus 37 ~~~~~~vLDi-G~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~ 110 (263)
T 2yqz_A 37 KGEEPVFLEL-GVGTGRIALPLIAR----GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI-PLPDESVHGVIV 110 (263)
T ss_dssp SSSCCEEEEE-TCTTSTTHHHHHTT----TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC-CSCTTCEEEEEE
T ss_pred CCCCCEEEEe-CCcCCHHHHHHHHC----CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccC-CCCCCCeeEEEE
Confidence 4567899999 99999999988864 57999999999999999999853356899999999764 322578999998
Q ss_pred cCCc---CcHHHHHHHHHhcCCCCcEEEEE
Q 041509 118 DCNL---ENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 118 D~~~---~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.... .+....++.+.+.|+|||.+++.
T Consensus 111 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 111 VHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 7543 25688999999999999988775
No 153
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.38 E-value=2.2e-12 Score=106.37 Aligned_cols=106 Identities=12% Similarity=0.078 Sum_probs=86.8
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
..++.+|||+ |||+|..+..++... ..+|+++|+++.+++.|++++... .+++++.+|+.+. +...++||+|++
T Consensus 91 ~~~~~~vLDi-G~G~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~-~~~~~~fD~v~~ 164 (254)
T 1xtp_A 91 GHGTSRALDC-GAGIGRITKNLLTKL---YATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETA-TLPPNTYDLIVI 164 (254)
T ss_dssp TCCCSEEEEE-TCTTTHHHHHTHHHH---CSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGC-CCCSSCEEEEEE
T ss_pred ccCCCEEEEE-CCCcCHHHHHHHHhh---cCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHC-CCCCCCeEEEEE
Confidence 3467899999 999999999998764 468999999999999999998743 6899999999874 322578999998
Q ss_pred cCCc-----CcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 118 DCNL-----ENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 118 D~~~-----~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
.... .+....++.+.+.|+|||.+++.++...
T Consensus 165 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 201 (254)
T 1xtp_A 165 QWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCST 201 (254)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC-
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 7543 2357889999999999999999887543
No 154
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.37 E-value=1.9e-12 Score=114.55 Aligned_cols=106 Identities=12% Similarity=0.143 Sum_probs=87.6
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-------C-C-CCcEEEEEcchHHHh---
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-------L-D-ASHVEFVIGDAQSLL--- 105 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-------~-~-~~~V~~~~gda~e~l--- 105 (211)
..++.+|||+ |||+|..+..++....+ +++|+++|+++++++.|+++++ + + ..+++++.+|+.+..
T Consensus 81 ~~~~~~VLDl-GcG~G~~~~~la~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDL-GCGTGRDVYLASKLVGE-HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEE-SCTTSHHHHHHHHHHTT-TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEe-cCccCHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc
Confidence 4467899999 99999999999988743 6899999999999999999875 1 2 268999999998752
Q ss_pred --hhccCCccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 106 --LSHFREADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 106 --~~l~~~fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+...++||+|+..... .+....++.+.+.|+|||.+++.+
T Consensus 159 ~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 159 PEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp SCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 2125799999988643 367899999999999999888865
No 155
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.37 E-value=4.9e-12 Score=113.64 Aligned_cols=112 Identities=13% Similarity=0.035 Sum_probs=86.6
Q ss_pred HHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHh-------c--CC-CCcEEEEEcchHHH
Q 041509 35 LAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKIL-------G--LD-ASHVEFVIGDAQSL 104 (211)
Q Consensus 35 l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~-------~--~~-~~~V~~~~gda~e~ 104 (211)
.+...+..+|||+ |||+|..++.+|...+ ..+|++||+++++++.|+++. + ++ ..+|+|++||+.+.
T Consensus 168 ~l~l~~gd~VLDL-GCGtG~l~l~lA~~~g--~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l 244 (438)
T 3uwp_A 168 EIKMTDDDLFVDL-GSGVGQVVLQVAAATN--CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 244 (438)
T ss_dssp HHCCCTTCEEEEE-SCTTSHHHHHHHHHCC--CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH
T ss_pred hcCCCCCCEEEEe-CCCCCHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC
Confidence 3456778899999 9999999999987642 457999999999999999864 2 44 37899999999875
Q ss_pred hhhc-cCCccEEEEcCC--cCcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 105 LLSH-FREADFVLIDCN--LENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 105 l~~l-~~~fD~VfiD~~--~~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
-... ...||+||+... .++....+.++.+.|+|||.+++.+....
T Consensus 245 p~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 245 EWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred ccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 3211 257999998653 23567788889999999998887655444
No 156
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.37 E-value=2e-12 Score=106.93 Aligned_cols=102 Identities=12% Similarity=0.056 Sum_probs=84.3
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
...++.+|||+ |||+|..+..++... ..+|+++|+++++++.|++++. ..+++++.+|+.+. +...++||+|+
T Consensus 41 ~~~~~~~vLD~-GcG~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~-~~~~~~fD~v~ 113 (253)
T 3g5l_A 41 PDFNQKTVLDL-GCGFGWHCIYAAEHG---AKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDI-AIEPDAYNVVL 113 (253)
T ss_dssp CCCTTCEEEEE-TCTTCHHHHHHHHTT---CSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGC-CCCTTCEEEEE
T ss_pred hccCCCEEEEE-CCCCCHHHHHHHHcC---CCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhC-CCCCCCeEEEE
Confidence 33467899999 999999999998753 2399999999999999999877 56899999999764 32257999999
Q ss_pred EcCCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 117 IDCNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 117 iD~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.... .+....++.+.+.|+|||.+++..
T Consensus 114 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 114 SSLALHYIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EchhhhhhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 87643 467889999999999999887753
No 157
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.36 E-value=1.8e-12 Score=106.71 Aligned_cols=96 Identities=15% Similarity=-0.003 Sum_probs=80.1
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVL 116 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~Vf 116 (211)
..++++|||+ |||+|..+..++.. +.+|+++|+++++++.|+++ ++++.+|+.+.+..+ .++||+|+
T Consensus 39 ~~~~~~vLDi-GcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~ 106 (240)
T 3dli_A 39 FKGCRRVLDI-GCGRGEFLELCKEE----GIESIGVDINEDMIKFCEGK-------FNVVKSDAIEYLKSLPDKYLDGVM 106 (240)
T ss_dssp TTTCSCEEEE-TCTTTHHHHHHHHH----TCCEEEECSCHHHHHHHHTT-------SEEECSCHHHHHHTSCTTCBSEEE
T ss_pred hcCCCeEEEE-eCCCCHHHHHHHhC----CCcEEEEECCHHHHHHHHhh-------cceeeccHHHHhhhcCCCCeeEEE
Confidence 3456899999 99999999988875 46899999999999999875 789999999876333 57999999
Q ss_pred EcCCc-----CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 117 IDCNL-----ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 117 iD~~~-----~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
..... +++..+++.+.+.|+|||.+++..
T Consensus 107 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 107 ISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred ECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 87532 256899999999999999888755
No 158
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.36 E-value=7.8e-13 Score=111.67 Aligned_cols=111 Identities=9% Similarity=0.066 Sum_probs=85.0
Q ss_pred ChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH
Q 041509 25 EPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL 104 (211)
Q Consensus 25 ~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~ 104 (211)
+++..++|.... ....+|||+ |||+|..+..|+.. +.+|++||++++|++.|++ ..+|+++++|+.+.
T Consensus 26 p~~l~~~l~~~~--~~~~~vLDv-GcGtG~~~~~l~~~----~~~v~gvD~s~~ml~~a~~-----~~~v~~~~~~~e~~ 93 (257)
T 4hg2_A 26 PRALFRWLGEVA--PARGDALDC-GCGSGQASLGLAEF----FERVHAVDPGEAQIRQALR-----HPRVTYAVAPAEDT 93 (257)
T ss_dssp CHHHHHHHHHHS--SCSSEEEEE-SCTTTTTHHHHHTT----CSEEEEEESCHHHHHTCCC-----CTTEEEEECCTTCC
T ss_pred HHHHHHHHHHhc--CCCCCEEEE-cCCCCHHHHHHHHh----CCEEEEEeCcHHhhhhhhh-----cCCceeehhhhhhh
Confidence 344445554443 234689999 99999999999854 5799999999999987764 25799999999875
Q ss_pred hhhccCCccEEEEcCCcC--cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 105 LLSHFREADFVLIDCNLE--NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 105 l~~l~~~fD~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
+-.+++||+|+...... +....++++.+.|+|||.+++..+..
T Consensus 94 -~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 94 -GLPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp -CCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -cccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 32268999999865432 46789999999999999887776543
No 159
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.36 E-value=4.6e-12 Score=106.94 Aligned_cols=118 Identities=14% Similarity=0.075 Sum_probs=92.9
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CC---CCcEEEE
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LD---ASHVEFV 97 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~---~~~V~~~ 97 (211)
.......++|..++...++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|+++.. .. ..++.+.
T Consensus 40 ~~~~~~~~~l~~~l~~~~~~~vLDi-GcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~ 114 (293)
T 3thr_A 40 SRTAEYKAWLLGLLRQHGCHRVLDV-ACGTGVDSIMLVEE----GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIE 114 (293)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEET-TCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEE
T ss_pred chHHHHHHHHHHHhcccCCCEEEEe-cCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEe
Confidence 3445566777777777788999999 99999999999875 4599999999999999998873 11 2468999
Q ss_pred EcchHHHhhh--ccCCccEEEEcC-C---cCc-------HHHHHHHHHhcCCCCcEEEEEe
Q 041509 98 IGDAQSLLLS--HFREADFVLIDC-N---LEN-------HEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 98 ~gda~e~l~~--l~~~fD~VfiD~-~---~~~-------y~~~l~~~~~~L~pgG~viv~d 145 (211)
.+|+.+.... ..++||+|++.+ . ..+ ....++.+.+.|+|||.+++..
T Consensus 115 ~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 115 EANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp ECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 9999876421 257999999862 1 123 7889999999999988887654
No 160
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.36 E-value=3.8e-13 Score=110.23 Aligned_cols=105 Identities=10% Similarity=0.040 Sum_probs=82.1
Q ss_pred hhHHHHHHHHHh--hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH
Q 041509 26 PNEAEFISALAA--GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS 103 (211)
Q Consensus 26 ~~~~~lL~~l~~--~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e 103 (211)
|....++..+.. ..++.+|||+ |||+|+.+..++.. +.+|+++|+++.+++.|+++ ..+++++++|+.+
T Consensus 32 ~~~~~l~~~~~~~~~~~~~~vLDi-GcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~ 102 (226)
T 3m33_A 32 PDPELTFDLWLSRLLTPQTRVLEA-GCGHGPDAARFGPQ----AARWAAYDFSPELLKLARAN----APHADVYEWNGKG 102 (226)
T ss_dssp SCTTHHHHHHHHHHCCTTCEEEEE-SCTTSHHHHHHGGG----SSEEEEEESCHHHHHHHHHH----CTTSEEEECCSCS
T ss_pred CCHHHHHHHHHHhcCCCCCeEEEe-CCCCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHh----CCCceEEEcchhh
Confidence 433344444332 3567899999 99999999999875 57999999999999999998 3469999999976
Q ss_pred Hhhhc-cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEE
Q 041509 104 LLLSH-FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVV 142 (211)
Q Consensus 104 ~l~~l-~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~vi 142 (211)
.++.. .++||+|+...+ ....++.+.+.|+|||.++
T Consensus 103 ~~~~~~~~~fD~v~~~~~---~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 103 ELPAGLGAPFGLIVSRRG---PTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp SCCTTCCCCEEEEEEESC---CSGGGGGHHHHEEEEEEEE
T ss_pred ccCCcCCCCEEEEEeCCC---HHHHHHHHHHHcCCCcEEE
Confidence 66543 579999998744 4467788888999988776
No 161
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.35 E-value=2.3e-12 Score=112.55 Aligned_cols=99 Identities=9% Similarity=0.008 Sum_probs=83.3
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
.++++|||+ |||+|..++. |. .+.+|+++|.++++++.|++|++ ++.++++++++|+.+.+ ++||+|+
T Consensus 194 ~~~~~VLDl-g~G~G~~~l~-a~----~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDM-FAGVGPFSIA-CK----NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----VKGNRVI 263 (336)
T ss_dssp CTTCEEEET-TCTTSHHHHH-TT----TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----CCEEEEE
T ss_pred CCCCEEEEc-cCccCHHHHh-cc----CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----CCCcEEE
Confidence 477899999 8999999998 75 26899999999999999999998 55578999999999875 7899999
Q ss_pred EcCCcCcHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 117 IDCNLENHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 117 iD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
+|.+.. ..++++.+.++|+|||.+++.++..
T Consensus 264 ~dpP~~-~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 264 MNLPKF-AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp ECCTTT-GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred ECCcHh-HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 997543 3478888899999988877766543
No 162
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.35 E-value=1.9e-12 Score=107.00 Aligned_cols=100 Identities=12% Similarity=0.036 Sum_probs=84.6
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
...++.+|||+ |||+|..+..++...+ +++|+++|+++++++.|+++ ..+++++.+|+.+.. ..++||+|+
T Consensus 30 ~~~~~~~vLdi-G~G~G~~~~~l~~~~~--~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~~--~~~~fD~v~ 100 (259)
T 2p35_A 30 PLERVLNGYDL-GCGPGNSTELLTDRYG--VNVITGIDSDDDMLEKAADR----LPNTNFGKADLATWK--PAQKADLLY 100 (259)
T ss_dssp CCSCCSSEEEE-TCTTTHHHHHHHHHHC--TTSEEEEESCHHHHHHHHHH----STTSEEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCCCEEEEe-cCcCCHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHh----CCCcEEEECChhhcC--ccCCcCEEE
Confidence 34567899999 9999999999998873 67999999999999999988 346899999998754 367999999
Q ss_pred EcCCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 117 IDCNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 117 iD~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
..... .+....++.+.+.|+|||.+++..
T Consensus 101 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 101 ANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 87643 367889999999999999888765
No 163
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.35 E-value=4e-12 Score=104.94 Aligned_cols=108 Identities=20% Similarity=0.250 Sum_probs=84.3
Q ss_pred HHHHHHHHhh---CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHh
Q 041509 29 AEFISALAAG---NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLL 105 (211)
Q Consensus 29 ~~lL~~l~~~---~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l 105 (211)
.+++..++.. .++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|++++.....+++++++|+.+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDl-GcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDL-ACGTGIPTLELAER----GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA 101 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEE-TCTTCHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC
T ss_pred HHHHHHHHHHhcccCCCEEEEe-CCCCCHHHHHHHHC----CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcc
Confidence 4455555443 356899999 99999999999864 579999999999999999998722237999999998753
Q ss_pred hhccCCccEEEEcCCc------CcHHHHHHHHHhcCCCCcEEEE
Q 041509 106 LSHFREADFVLIDCNL------ENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 106 ~~l~~~fD~VfiD~~~------~~y~~~l~~~~~~L~pgG~viv 143 (211)
..++||+|++.... .+....++.+.+.|+|||.+++
T Consensus 102 --~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 102 --FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp --CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred --cCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 25789999975321 2457889999999999887765
No 164
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.35 E-value=2.9e-12 Score=104.84 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=82.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
.++.+|||+ |||+|..+..++.. +.+|+++|+++.+++.|+++.. ..+++++.+|+.+. +...++||+|+..
T Consensus 52 ~~~~~vLDi-G~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~-~~~~~~fD~v~~~ 123 (242)
T 3l8d_A 52 KKEAEVLDV-GCGDGYGTYKLSRT----GYKAVGVDISEVMIQKGKERGE--GPDLSFIKGDLSSL-PFENEQFEAIMAI 123 (242)
T ss_dssp CTTCEEEEE-TCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHTTTC--BTTEEEEECBTTBC-SSCTTCEEEEEEE
T ss_pred CCCCeEEEE-cCCCCHHHHHHHHc----CCeEEEEECCHHHHHHHHhhcc--cCCceEEEcchhcC-CCCCCCccEEEEc
Confidence 367799999 99999999999875 5799999999999999998754 46799999999875 3226799999987
Q ss_pred CCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 119 CNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 119 ~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
... .+....++.+.+.|+|||.+++.+
T Consensus 124 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 124 NSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp SCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 533 366789999999999999888866
No 165
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.35 E-value=1.5e-12 Score=108.25 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=87.9
Q ss_pred HHHHHHHhh---CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC-----CCc--------
Q 041509 30 EFISALAAG---NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD-----ASH-------- 93 (211)
Q Consensus 30 ~lL~~l~~~---~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~-----~~~-------- 93 (211)
+++..+... .++.+|||+ |||+|..++.++..+...+.+|+++|+++++++.|++++... .++
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~-gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDP-CCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEET-TCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEEC-CCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 455444433 246789999 899999999999873112579999999999999999988722 112
Q ss_pred -----------------EE-------------EEEcchHHHhhh----ccCCccEEEEcCCc------------CcHHHH
Q 041509 94 -----------------VE-------------FVIGDAQSLLLS----HFREADFVLIDCNL------------ENHEGV 127 (211)
Q Consensus 94 -----------------V~-------------~~~gda~e~l~~----l~~~fD~VfiD~~~------------~~y~~~ 127 (211)
|+ ++++|+.+.++. ..++||+|+.+... ..+..+
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~ 196 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGL 196 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHH
Confidence 67 999999876531 23489999997531 235688
Q ss_pred HHHHHhcCCCCcEEEEEecCC
Q 041509 128 LRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 128 l~~~~~~L~pgG~viv~dn~~ 148 (211)
++.+.+.|+|||.+++.++..
T Consensus 197 l~~~~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 197 LRSLASALPAHAVIAVTDRSR 217 (250)
T ss_dssp HHHHHHHSCTTCEEEEEESSS
T ss_pred HHHHHHhcCCCcEEEEeCcch
Confidence 999999999999998876643
No 166
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.35 E-value=8.3e-12 Score=104.29 Aligned_cols=111 Identities=11% Similarity=-0.051 Sum_probs=84.0
Q ss_pred HhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChh------HHHHHHHHhc--CCCCcEEEEEcc-hHH-Hh
Q 041509 36 AAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVE------EYKLSKKILG--LDASHVEFVIGD-AQS-LL 105 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~------~~~~Ar~~~~--~~~~~V~~~~gd-a~e-~l 105 (211)
+...++++|||| |||+|+.+..++...++ .++|+++|++++ +++.|++++. +..++++++.+| ... .+
T Consensus 39 ~~~~~~~~vLDi-GcG~G~~~~~l~~~~g~-~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 116 (275)
T 3bkx_A 39 WQVKPGEKILEI-GCGQGDLSAVLADQVGS-SGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLG 116 (275)
T ss_dssp HTCCTTCEEEEE-SCTTSHHHHHHHHHHCT-TCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCG
T ss_pred cCCCCCCEEEEe-CCCCCHHHHHHHHHhCC-CCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccC
Confidence 345677899999 99999999999987632 589999999997 9999999987 445789999998 321 12
Q ss_pred hhccCCccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 106 LSHFREADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 106 ~~l~~~fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
+...++||+|++.... .+...+++.+..+++|||.+++.+...
T Consensus 117 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 117 PIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp GGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 2225789999987643 234556666677777799888876433
No 167
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.34 E-value=2.6e-12 Score=104.22 Aligned_cols=102 Identities=20% Similarity=0.177 Sum_probs=83.3
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CC----CCcEEEEEcchHHHhhhccCCc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LD----ASHVEFVIGDAQSLLLSHFREA 112 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~----~~~V~~~~gda~e~l~~l~~~f 112 (211)
.+..+|||+ |||+|..+..++.. +.+|+++|+++.+++.|++++. +. ..+++++.+|+.+. +...++|
T Consensus 29 ~~~~~vLdi-G~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~ 102 (235)
T 3sm3_A 29 QEDDEILDI-GCGSGKISLELASK----GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-SFHDSSF 102 (235)
T ss_dssp CTTCEEEEE-TCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-CSCTTCE
T ss_pred CCCCeEEEE-CCCCCHHHHHHHhC----CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-CCCCCce
Confidence 467899999 99999999999875 5799999999999999999987 32 34799999999865 3226789
Q ss_pred cEEEEcCCcC---c---HHHHHHHHHhcCCCCcEEEEEec
Q 041509 113 DFVLIDCNLE---N---HEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 113 D~VfiD~~~~---~---y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|+|++..... + ....++.+.+.|+|||.+++.+-
T Consensus 103 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 103 DFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 9999875332 2 34899999999999998888763
No 168
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.34 E-value=7.4e-12 Score=109.97 Aligned_cols=107 Identities=8% Similarity=-0.021 Sum_probs=88.0
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHh-hhccCCccEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLL-LSHFREADFV 115 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l-~~l~~~fD~V 115 (211)
.++++|||| |||+|..+..+++..+ +.+++.+|. |++++.|++++. +..++|+++.+|+.+.- + +.++||+|
T Consensus 178 ~~~~~vlDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~p~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDI-GGNTGKWATQCVQYNK--EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVP-FPTGFDAV 252 (363)
T ss_dssp GCCSEEEEE-SCTTCHHHHHHHHHST--TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCC-CCCCCSEE
T ss_pred cCCCEEEEe-CCCcCHHHHHHHHhCC--CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCC-CCCCcCEE
Confidence 467899999 9999999999999874 579999999 999999999988 55679999999997641 1 23689999
Q ss_pred EEcCCc-----CcHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 116 LIDCNL-----ENHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 116 fiD~~~-----~~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
++-.-. ++....++.+.+.|+|||.+++.|.....
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 253 WMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp EEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred EEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 985432 23467899999999999999998866543
No 169
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.34 E-value=2.8e-12 Score=108.77 Aligned_cols=112 Identities=14% Similarity=0.003 Sum_probs=81.6
Q ss_pred hhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH-H
Q 041509 26 PNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS-L 104 (211)
Q Consensus 26 ~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e-~ 104 (211)
+...+.+...+...++.+|||+ |||+|..++.|++. +.+|++||++++|++.|++++... .+..-..+... .
T Consensus 31 ~~~~~~il~~l~l~~g~~VLDl-GcGtG~~a~~La~~----g~~V~gvD~S~~ml~~Ar~~~~~~--~v~~~~~~~~~~~ 103 (261)
T 3iv6_A 31 PSDRENDIFLENIVPGSTVAVI-GASTRFLIEKALER----GASVTVFDFSQRMCDDLAEALADR--CVTIDLLDITAEI 103 (261)
T ss_dssp CCHHHHHHHTTTCCTTCEEEEE-CTTCHHHHHHHHHT----TCEEEEEESCHHHHHHHHHHTSSS--CCEEEECCTTSCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEE-eCcchHHHHHHHhc----CCEEEEEECCHHHHHHHHHHHHhc--cceeeeeeccccc
Confidence 4455555555566778899999 99999999999864 679999999999999999998732 22222222211 0
Q ss_pred hhhccCCccEEEEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEe
Q 041509 105 LLSHFREADFVLIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 105 l~~l~~~fD~VfiD~~~~-----~y~~~l~~~~~~L~pgG~viv~d 145 (211)
...+.++||+|+.+.... +....++.+.++| |||.+++..
T Consensus 104 ~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 104 PKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp CGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred ccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 112357999999986432 4466888888889 999988764
No 170
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.34 E-value=4.9e-12 Score=101.89 Aligned_cols=103 Identities=15% Similarity=0.064 Sum_probs=82.7
Q ss_pred HHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhh---ccC
Q 041509 34 ALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLS---HFR 110 (211)
Q Consensus 34 ~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~---l~~ 110 (211)
......++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|+++ .+++++.+|+.+.... ..+
T Consensus 46 ~~~~~~~~~~vLdi-G~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~ 115 (227)
T 3e8s_A 46 LAILGRQPERVLDL-GCGEGWLLRALADR----GIEAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGK 115 (227)
T ss_dssp HHHHHTCCSEEEEE-TCTTCHHHHHHHTT----TCEEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCC
T ss_pred HHhhcCCCCEEEEe-CCCCCHHHHHHHHC----CCEEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCC
Confidence 33345577999999 99999999988864 56999999999999999987 4577889998887321 144
Q ss_pred CccEEEEcCC--cCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 111 EADFVLIDCN--LENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 111 ~fD~VfiD~~--~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+||+|++... ..+....++.+.+.|+|||.+++.+.
T Consensus 116 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 116 DYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence 6999998753 34678899999999999998888653
No 171
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.34 E-value=4.9e-12 Score=106.44 Aligned_cols=103 Identities=12% Similarity=0.026 Sum_probs=84.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
.++.+|||+ |||+|..+..++.. ..++|+++|+++++++.|++++. +...+++++++|+.+......++||+|+
T Consensus 63 ~~~~~vLDi-GcG~G~~~~~l~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 138 (298)
T 1ri5_A 63 KRGDSVLDL-GCGKGGDLLKYERA---GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVIS 138 (298)
T ss_dssp CTTCEEEEE-TCTTTTTHHHHHHH---TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEE
T ss_pred CCCCeEEEE-CCCCCHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEE
Confidence 567899999 99999988888765 24699999999999999999987 4456899999999875211257899999
Q ss_pred EcCCc-------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 117 IDCNL-------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 117 iD~~~-------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.... .+....++.+.+.|+|||.+++..
T Consensus 139 ~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 139 SQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 87543 345789999999999999887754
No 172
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.34 E-value=6.3e-12 Score=113.33 Aligned_cols=110 Identities=14% Similarity=0.140 Sum_probs=85.7
Q ss_pred hhHHH-HHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchH
Q 041509 26 PNEAE-FISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQ 102 (211)
Q Consensus 26 ~~~~~-lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~ 102 (211)
+...+ ++..+....+.++|||+ |||+|..++.||.. +.+|+++|.++++++.|++|++ +. + ++|+.+|+.
T Consensus 275 ~~~~e~l~~~~~~~~~~~~VLDl-gcG~G~~sl~la~~----~~~V~gvD~s~~ai~~A~~n~~~ngl-~-v~~~~~d~~ 347 (425)
T 2jjq_A 275 SYQAVNLVRKVSELVEGEKILDM-YSGVGTFGIYLAKR----GFNVKGFDSNEFAIEMARRNVEINNV-D-AEFEVASDR 347 (425)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEEE-TCTTTHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHHTC-C-EEEEECCTT
T ss_pred HHHHHHHHHHhhccCCCCEEEEe-eccchHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHcCC-c-EEEEECChH
Confidence 34444 33333335667899999 99999999999874 5699999999999999999998 44 4 999999999
Q ss_pred HHhhhccCCccEEEEcCCcCcH-HHHHHHHHhcCCCCcEEEEEec
Q 041509 103 SLLLSHFREADFVLIDCNLENH-EGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~~y-~~~l~~~~~~L~pgG~viv~dn 146 (211)
+.++ .+||+|++|.+...+ ...++.+. .|+|+|.+++..|
T Consensus 348 ~~~~---~~fD~Vv~dPPr~g~~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 348 EVSV---KGFDTVIVDPPRAGLHPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp TCCC---TTCSEEEECCCTTCSCHHHHHHHH-HHCCSEEEEEESC
T ss_pred HcCc---cCCCEEEEcCCccchHHHHHHHHH-hcCCCcEEEEECC
Confidence 8754 289999999886544 34666665 4789998888765
No 173
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.34 E-value=1.6e-12 Score=104.20 Aligned_cols=115 Identities=12% Similarity=0.128 Sum_probs=88.0
Q ss_pred hHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhh
Q 041509 27 NEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLL 106 (211)
Q Consensus 27 ~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~ 106 (211)
...+++..+....++.+|||+ |||+|..++.++.. .+.+|+++|+++++++.|++++.....+++++.+|+.+. +
T Consensus 10 ~~~~~~~~~~~~~~~~~vLDi-GcG~G~~~~~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~ 84 (209)
T 2p8j_A 10 QLYRFLKYCNESNLDKTVLDC-GAGGDLPPLSIFVE---DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL-P 84 (209)
T ss_dssp HHHHHHHHHHHSSSCSEEEEE-SCCSSSCTHHHHHH---TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC-C
T ss_pred hHHHHHHHHhccCCCCEEEEE-CCCCCHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC-C
Confidence 345666666666678899999 99999875554433 267999999999999999999872125799999999874 3
Q ss_pred hccCCccEEEEcCCc-----CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 107 SHFREADFVLIDCNL-----ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 107 ~l~~~fD~VfiD~~~-----~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
...++||+|+..... .+....++.+.+.|+|||.+++.+.
T Consensus 85 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 85 FKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp SCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 225789999986432 3567889999999999998887664
No 174
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.33 E-value=5.1e-12 Score=111.62 Aligned_cols=97 Identities=14% Similarity=0.034 Sum_probs=81.1
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhh-ccCCccEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLS-HFREADFVL 116 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~-l~~~fD~Vf 116 (211)
++++|||+ | |+|..++.++...+ .++|+++|+++++++.|++|++ ++. +|+++.+|+.+.++. ..++||+|+
T Consensus 172 ~~~~VLDl-G-G~G~~~~~la~~~~--~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVL-G-DDDLTSIALMLSGL--PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEE-S-CTTCHHHHHHHHTC--CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEE-C-CCCHHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEE
Confidence 57899999 9 99999999987632 4799999999999999999998 654 899999999885552 356899999
Q ss_pred EcCCcC--cHHHHHHHHHhcCCCCcEE
Q 041509 117 IDCNLE--NHEGVLRAVQAGNKPNGAV 141 (211)
Q Consensus 117 iD~~~~--~y~~~l~~~~~~L~pgG~v 141 (211)
+|.... ....+++.+.+.|+|||.+
T Consensus 247 ~~~p~~~~~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 247 TDPPETLEAIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp ECCCSSHHHHHHHHHHHHHTBCSTTCE
T ss_pred ECCCCchHHHHHHHHHHHHHcccCCeE
Confidence 997542 3577889999999999954
No 175
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=3.1e-12 Score=106.95 Aligned_cols=111 Identities=16% Similarity=0.087 Sum_probs=89.6
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS 103 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e 103 (211)
..+...+.+...+...++.+|||+ |||+|..+..++. .+.+|+++|+++.+++.|+++. +++++++|+.+
T Consensus 18 ~~~~~~~~l~~~~~~~~~~~vLDi-GcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~~ 87 (261)
T 3ege_A 18 PDIRIVNAIINLLNLPKGSVIADI-GAGTGGYSVALAN----QGLFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAEN 87 (261)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEE-TCTTSHHHHHHHT----TTCEEEEECSCHHHHHSSCCCT-----TEEEECCCTTS
T ss_pred ccHHHHHHHHHHhCCCCCCEEEEE-cCcccHHHHHHHh----CCCEEEEEeCCHHHHHHHHhcc-----CCEEEECchhh
Confidence 445666667666666788999999 9999999999985 3689999999999998776543 79999999976
Q ss_pred HhhhccCCccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 104 LLLSHFREADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 104 ~l~~l~~~fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
. +...++||+|+..... .+....++.+.+.|+ ||.+++.+.
T Consensus 88 ~-~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 88 L-ALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp C-CSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred C-CCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 4 3225799999987643 467899999999999 997777663
No 176
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.33 E-value=3e-12 Score=103.62 Aligned_cols=100 Identities=19% Similarity=0.201 Sum_probs=81.6
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDC 119 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~ 119 (211)
++.+|||+ |||+|..+..++... .+++++|+++++++.|++++.....+++++++|+.+. +...++||+|++..
T Consensus 38 ~~~~vLDl-G~G~G~~~~~l~~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~~~~ 111 (227)
T 1ve3_A 38 KRGKVLDL-ACGVGGFSFLLEDYG----FEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKL-SFEDKTFDYVIFID 111 (227)
T ss_dssp SCCEEEEE-TCTTSHHHHHHHHTT----CEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSC-CSCTTCEEEEEEES
T ss_pred CCCeEEEE-eccCCHHHHHHHHcC----CEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcC-CCCCCcEEEEEEcC
Confidence 46799999 999999999888753 3999999999999999999872237899999999874 21246899999876
Q ss_pred C--cC---cHHHHHHHHHhcCCCCcEEEEEe
Q 041509 120 N--LE---NHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 120 ~--~~---~y~~~l~~~~~~L~pgG~viv~d 145 (211)
. .. +..+.++.+.+.|+|||.+++.+
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 112 SIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp CGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 5 22 45778999999999999888765
No 177
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.33 E-value=2.3e-12 Score=105.29 Aligned_cols=111 Identities=14% Similarity=0.056 Sum_probs=87.4
Q ss_pred hhHHHHHHHHHhhC--CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH
Q 041509 26 PNEAEFISALAAGN--NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS 103 (211)
Q Consensus 26 ~~~~~lL~~l~~~~--~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e 103 (211)
....+++..++... ++.+|||+ |||+|..+..++.. +.+++++|+++++++.|++++.....+++++++|+.+
T Consensus 21 ~~~~~~~~~~l~~~~~~~~~vLdi-G~G~G~~~~~l~~~----~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~ 95 (246)
T 1y8c_A 21 KKWSDFIIEKCVENNLVFDDYLDL-ACGTGNLTENLCPK----FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN 95 (246)
T ss_dssp HHHHHHHHHHHHTTTCCTTEEEEE-TCTTSTTHHHHGGG----SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEe-CCCCCHHHHHHHHC----CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEeccccc
Confidence 34455666665544 67899999 99999999988865 4689999999999999999987222279999999987
Q ss_pred HhhhccCCccEEEEcC-Cc------CcHHHHHHHHHhcCCCCcEEEE
Q 041509 104 LLLSHFREADFVLIDC-NL------ENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 104 ~l~~l~~~fD~VfiD~-~~------~~y~~~l~~~~~~L~pgG~viv 143 (211)
... .++||+|++.. .. .+....++.+.+.|+|||.+++
T Consensus 96 ~~~--~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 96 LNI--NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CCC--SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCc--cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 532 47899999876 21 3567889999999999887766
No 178
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.32 E-value=5.3e-12 Score=111.65 Aligned_cols=117 Identities=13% Similarity=0.063 Sum_probs=92.0
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gd 100 (211)
.+.+..++.+..++ ..++.+|||+ |||+|..++.++...+ .++|+++|+|+++++.|++|++ ++.++|+++++|
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~-gCGsG~~~i~~a~~~~--~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D 276 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDP-MCGSGTILIELALRRY--SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGD 276 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEET-TCTTCHHHHHHHHTTC--CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECC
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEc-cCcCcHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 35666777777777 6678899999 8999999999987642 4699999999999999999998 666789999999
Q ss_pred hHHHhhhccCCccEEEEcCCcC-----------cHHHHHHHHHhcCCCCcEEEEEe
Q 041509 101 AQSLLLSHFREADFVLIDCNLE-----------NHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 101 a~e~l~~l~~~fD~VfiD~~~~-----------~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+.+... ..++||+|+.|.+-. .|.++++.+.+.| +|+.+++..
T Consensus 277 ~~~~~~-~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~ 330 (373)
T 3tm4_A 277 ATQLSQ-YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFITT 330 (373)
T ss_dssp GGGGGG-TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEES
T ss_pred hhhCCc-ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEEC
Confidence 998643 257899999986521 2677888888877 444455433
No 179
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.32 E-value=3e-12 Score=108.90 Aligned_cols=99 Identities=15% Similarity=0.174 Sum_probs=81.1
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCC----CcEEEEEcchHHHhhhccCCccEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDA----SHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~----~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
++.+|||+ |||+|..+..|+.. +.+|+++|+++.+++.|++++.... .+++++++|+.+. + ..++||+|
T Consensus 82 ~~~~vLDl-GcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~-~-~~~~fD~v 154 (299)
T 3g2m_A 82 VSGPVLEL-AAGMGRLTFPFLDL----GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF-A-LDKRFGTV 154 (299)
T ss_dssp CCSCEEEE-TCTTTTTHHHHHTT----TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC-C-CSCCEEEE
T ss_pred CCCcEEEE-eccCCHHHHHHHHc----CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC-C-cCCCcCEE
Confidence 44589999 99999999999864 5789999999999999999988322 7899999999875 3 26899999
Q ss_pred EEcC------CcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 116 LIDC------NLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 116 fiD~------~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
++.. +..+...+++.+.+.|+|||.+++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 155 VISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp EECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 8642 12245789999999999988887754
No 180
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.32 E-value=6.2e-12 Score=113.09 Aligned_cols=125 Identities=14% Similarity=0.060 Sum_probs=100.0
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchH
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQ 102 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~ 102 (211)
.++.....++..++...++.+|||+ |||+|..|..++...+ +++|+++|+++.+++.+++|++...-+++++++|+.
T Consensus 229 ~~qd~~s~~~~~~l~~~~g~~VLDl-gaG~G~~t~~la~~~~--~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~ 305 (429)
T 1sqg_A 229 TVQDASAQGCMTWLAPQNGEHILDL-CAAPGGKTTHILEVAP--EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 (429)
T ss_dssp EECCHHHHTHHHHHCCCTTCEEEEE-SCTTCHHHHHHHHHCT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT
T ss_pred EeeCHHHHHHHHHcCCCCcCeEEEE-CCCchHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchh
Confidence 4666677778878888888899999 7999999999998874 489999999999999999999821224899999998
Q ss_pred HHhhhc-cCCccEEEEcCCcC-------------------------cHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 103 SLLLSH-FREADFVLIDCNLE-------------------------NHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 103 e~l~~l-~~~fD~VfiD~~~~-------------------------~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
+..+.+ .++||.|++|++-. .+.++++.+.++|+|||.++++...+.+
T Consensus 306 ~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 306 YPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp CTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred hchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 765323 36899999996421 0247889999999999998887776654
No 181
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.32 E-value=7.2e-12 Score=110.58 Aligned_cols=96 Identities=10% Similarity=0.011 Sum_probs=75.3
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhhcc----------
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLSHF---------- 109 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~l~---------- 109 (211)
+++|||+ |||+|..|+++|.. .++|+++|.++++++.|++|++ ...++++|+.+|+.+.++.+.
T Consensus 214 ~~~vLDl-~cG~G~~~l~la~~----~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~ 288 (369)
T 3bt7_A 214 KGDLLEL-YCGNGNFSLALARN----FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQG 288 (369)
T ss_dssp CSEEEEE-SCTTSHHHHHHGGG----SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGG
T ss_pred CCEEEEc-cCCCCHHHHHHHhc----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccc
Confidence 5789999 89999999998864 4699999999999999999998 323689999999999876442
Q ss_pred -----CCccEEEEcCCcCc-HHHHHHHHHhcCCCCcEEEEEe
Q 041509 110 -----READFVLIDCNLEN-HEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 110 -----~~fD~VfiD~~~~~-y~~~l~~~~~~L~pgG~viv~d 145 (211)
.+||+|++|.+... ..+.++.+ +++|.++.+.
T Consensus 289 ~~~~~~~fD~Vv~dPPr~g~~~~~~~~l----~~~g~ivyvs 326 (369)
T 3bt7_A 289 IDLKSYQCETIFVDPPRSGLDSETEKMV----QAYPRILYIS 326 (369)
T ss_dssp SCGGGCCEEEEEECCCTTCCCHHHHHHH----TTSSEEEEEE
T ss_pred cccccCCCCEEEECcCccccHHHHHHHH----hCCCEEEEEE
Confidence 27999999988653 33444444 3567666544
No 182
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=7.2e-12 Score=103.13 Aligned_cols=113 Identities=12% Similarity=-0.022 Sum_probs=87.4
Q ss_pred HHHHHHHHh-hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhh
Q 041509 29 AEFISALAA-GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLS 107 (211)
Q Consensus 29 ~~lL~~l~~-~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~ 107 (211)
.+.+..+.. ..+..+|||+ |||+|..+..++... .+|+++|+++.+++.|++++. ..+++++++|+.+....
T Consensus 44 ~~~~~~~~~~~~~~~~vLD~-GcG~G~~~~~la~~~----~~v~gvD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~ 116 (245)
T 3ggd_A 44 VVDLPRFELLFNPELPLIDF-ACGNGTQTKFLSQFF----PRVIGLDVSKSALEIAAKENT--AANISYRLLDGLVPEQA 116 (245)
T ss_dssp HHHHHHHTTTSCTTSCEEEE-TCTTSHHHHHHHHHS----SCEEEEESCHHHHHHHHHHSC--CTTEEEEECCTTCHHHH
T ss_pred HHHHHHHhhccCCCCeEEEE-cCCCCHHHHHHHHhC----CCEEEEECCHHHHHHHHHhCc--ccCceEEECcccccccc
Confidence 344444433 3456789999 999999999999864 389999999999999999875 34799999999775321
Q ss_pred c----cCCccEEEEcCCc-----CcHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 108 H----FREADFVLIDCNL-----ENHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 108 l----~~~fD~VfiD~~~-----~~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
. ...||+|+...-. .+...+++.+.+.|+|||.+++.+...
T Consensus 117 ~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 117 AQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp HHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred cccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 1 2359999987532 256789999999999999888877543
No 183
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=3e-12 Score=107.72 Aligned_cols=103 Identities=16% Similarity=0.227 Sum_probs=85.0
Q ss_pred HHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCC
Q 041509 32 ISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFRE 111 (211)
Q Consensus 32 L~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~ 111 (211)
+...+...++.+|||+ |||+|..+..++. .+++|+++|+++++++.|++++ .+++++.+|+.+. + ..++
T Consensus 49 l~~~l~~~~~~~vLDi-GcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~-~-~~~~ 117 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDL-GCGTGQLTEKIAQ----SGAEVLGTDNAATMIEKARQNY----PHLHFDVADARNF-R-VDKP 117 (279)
T ss_dssp HHHHHCCCTTCEEEEE-TCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTC-C-CSSC
T ss_pred HHHHhCCCCCCEEEEe-cCCCCHHHHHHHh----CCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhC-C-cCCC
Confidence 3344455678899999 9999999999987 2689999999999999999875 4688999999874 4 3679
Q ss_pred ccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 112 ADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 112 fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
||+|+..... .+....++.+.+.|+|||.+++..
T Consensus 118 fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 118 LDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999987643 466889999999999998887754
No 184
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.32 E-value=3.6e-12 Score=111.72 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=82.2
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccE
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADF 114 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~ 114 (211)
...++++|||+ |||+|..++.++++ ...+|++||+++ +++.|+++++ +..++|+++.+|+.+. +...++||+
T Consensus 63 ~~~~~~~VLDv-GcG~G~~~~~la~~---g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~ 136 (349)
T 3q7e_A 63 HLFKDKVVLDV-GSGTGILCMFAAKA---GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVDI 136 (349)
T ss_dssp HHHTTCEEEEE-SCTTSHHHHHHHHT---TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEEE
T ss_pred ccCCCCEEEEE-eccchHHHHHHHHC---CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceEE
Confidence 34577899999 99999999999876 256999999995 9999999997 6677899999999886 212579999
Q ss_pred EEEcC------CcCcHHHHHHHHHhcCCCCcEEE
Q 041509 115 VLIDC------NLENHEGVLRAVQAGNKPNGAVV 142 (211)
Q Consensus 115 VfiD~------~~~~y~~~l~~~~~~L~pgG~vi 142 (211)
|+.+. .......+++.+.+.|+|||.++
T Consensus 137 Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 137 IISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp EEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred EEEccccccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 99864 22456788899999999988765
No 185
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.31 E-value=6.1e-12 Score=109.96 Aligned_cols=105 Identities=11% Similarity=0.058 Sum_probs=83.1
Q ss_pred HHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhcc
Q 041509 32 ISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHF 109 (211)
Q Consensus 32 L~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~ 109 (211)
+.......++++|||+ |||+|..++.+++. ...+|+++|.++ +++.|+++++ +..++|+++.+|+.+. +...
T Consensus 56 i~~~~~~~~~~~VLDi-GcGtG~ls~~la~~---g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~ 129 (340)
T 2fyt_A 56 IYQNPHIFKDKVVLDV-GCGTGILSMFAAKA---GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV-HLPV 129 (340)
T ss_dssp HHHCGGGTTTCEEEEE-TCTTSHHHHHHHHT---TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSC
T ss_pred HHhhhhhcCCCEEEEe-eccCcHHHHHHHHc---CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh-cCCC
Confidence 3333445678899999 99999999998875 246999999997 9999999987 5568999999999875 2114
Q ss_pred CCccEEEEcCC------cCcHHHHHHHHHhcCCCCcEEE
Q 041509 110 READFVLIDCN------LENHEGVLRAVQAGNKPNGAVV 142 (211)
Q Consensus 110 ~~fD~VfiD~~------~~~y~~~l~~~~~~L~pgG~vi 142 (211)
++||+|+.+.- .......++.+.+.|+|||.++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 78999998751 1245678888899999988766
No 186
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.31 E-value=3.6e-12 Score=103.26 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=78.6
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHH----HHHhc-CCCCcEEEEEcchHHHhhhccCC
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLS----KKILG-LDASHVEFVIGDAQSLLLSHFRE 111 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~A----r~~~~-~~~~~V~~~~gda~e~l~~l~~~ 111 (211)
...++.+|||+ |||+|..+..++...+ +++|++||+++++++.+ +++.. ....+++++++|+.+. +...+.
T Consensus 24 ~~~~~~~vLDi-GcG~G~~~~~la~~~p--~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l-~~~~~~ 99 (218)
T 3mq2_A 24 RSQYDDVVLDV-GTGDGKHPYKVARQNP--SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL-PPLSGV 99 (218)
T ss_dssp HTTSSEEEEEE-SCTTCHHHHHHHHHCT--TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC-CSCCCE
T ss_pred hccCCCEEEEe-cCCCCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC-CCCCCC
Confidence 45577889999 9999999999998753 68999999999987753 33333 2245899999999884 432344
Q ss_pred ccEEEEcCCc--------CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 112 ADFVLIDCNL--------ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 112 fD~VfiD~~~--------~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|.|++.... .+...+++.+.+.|+|||.+++..+
T Consensus 100 -d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 100 -GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp -EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred -CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEec
Confidence 877765422 1226889999999999998887543
No 187
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.31 E-value=3.1e-12 Score=99.56 Aligned_cols=97 Identities=18% Similarity=0.090 Sum_probs=80.6
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
...++.+|||+ |||+|..+.+++... .+++++|+++++++.|+++ ..+++++.+| ++...++||+|+
T Consensus 14 ~~~~~~~vLDi-G~G~G~~~~~l~~~~----~~v~~vD~s~~~~~~a~~~----~~~v~~~~~d----~~~~~~~~D~v~ 80 (170)
T 3i9f_A 14 FEGKKGVIVDY-GCGNGFYCKYLLEFA----TKLYCIDINVIALKEVKEK----FDSVITLSDP----KEIPDNSVDFIL 80 (170)
T ss_dssp HSSCCEEEEEE-TCTTCTTHHHHHTTE----EEEEEECSCHHHHHHHHHH----CTTSEEESSG----GGSCTTCEEEEE
T ss_pred CcCCCCeEEEE-CCCCCHHHHHHHhhc----CeEEEEeCCHHHHHHHHHh----CCCcEEEeCC----CCCCCCceEEEE
Confidence 45677799999 999999999998753 4999999999999999998 3579999999 332357999999
Q ss_pred EcCCc---CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 117 IDCNL---ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 117 iD~~~---~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
..... .+....++.+.+.|+|||.+++.+-
T Consensus 81 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 81 FANSFHDMDDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp EESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EccchhcccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 87543 3678899999999999998888763
No 188
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.31 E-value=5.3e-12 Score=105.09 Aligned_cols=93 Identities=19% Similarity=0.156 Sum_probs=77.4
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDC 119 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~ 119 (211)
++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|++++. +++++++|+.+... .++||+|++..
T Consensus 50 ~~~~vLDi-GcG~G~~~~~l~~~----~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~--~~~fD~v~~~~ 118 (263)
T 3pfg_A 50 KAASLLDV-ACGTGMHLRHLADS----FGTVEGLELSADMLAIARRRNP----DAVLHHGDMRDFSL--GRRFSAVTCMF 118 (263)
T ss_dssp TCCEEEEE-TCTTSHHHHHHTTT----SSEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTCCC--SCCEEEEEECT
T ss_pred CCCcEEEe-CCcCCHHHHHHHHc----CCeEEEEECCHHHHHHHHhhCC----CCEEEECChHHCCc--cCCcCEEEEcC
Confidence 45899999 99999999988764 5689999999999999999854 68999999987532 68999999876
Q ss_pred C-c------CcHHHHHHHHHhcCCCCcEEEE
Q 041509 120 N-L------ENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 120 ~-~------~~y~~~l~~~~~~L~pgG~viv 143 (211)
+ . .+....++.+.+.|+|||.+++
T Consensus 119 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i 149 (263)
T 3pfg_A 119 SSIGHLAGQAELDAALERFAAHVLPDGVVVV 149 (263)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred chhhhcCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 2 1 2456789999999999887776
No 189
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.31 E-value=2e-11 Score=107.37 Aligned_cols=105 Identities=22% Similarity=0.181 Sum_probs=87.4
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
.++.+|||+ |||+|..+..+++..+ +.+++.+|+ |++++.|++++. ++.++|+++.+|..+.++ ..||+|+
T Consensus 201 ~~~~~vlDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p---~~~D~v~ 273 (369)
T 3gwz_A 201 SGAATAVDI-GGGRGSLMAAVLDAFP--GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIP---DGADVYL 273 (369)
T ss_dssp TTCSEEEEE-TCTTSHHHHHHHHHCT--TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC---SSCSEEE
T ss_pred ccCcEEEEe-CCCccHHHHHHHHHCC--CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCC---CCceEEE
Confidence 457899999 9999999999999864 679999999 999999999987 667899999999984333 3899999
Q ss_pred EcCCc-----CcHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 117 IDCNL-----ENHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 117 iD~~~-----~~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
+-.-. ....+.++.+.+.|+|||.+++.+.....
T Consensus 274 ~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 274 IKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred hhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 86432 23347999999999999999998876644
No 190
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.30 E-value=6.8e-12 Score=111.06 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=82.8
Q ss_pred HhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCcc
Q 041509 36 AAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREAD 113 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD 113 (211)
....++++|||+ |||+|..++.++++. ..+|++||.+ ++++.|+++++ ++.++|+++++|+.+... .++||
T Consensus 59 ~~~~~~~~VLDl-GcGtG~ls~~la~~g---~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~D 131 (376)
T 3r0q_C 59 KHHFEGKTVLDV-GTGSGILAIWSAQAG---ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL--PEKVD 131 (376)
T ss_dssp TTTTTTCEEEEE-SCTTTHHHHHHHHTT---CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC--SSCEE
T ss_pred cccCCCCEEEEe-ccCcCHHHHHHHhcC---CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc--CCcce
Confidence 344677899999 999999999998762 3599999999 99999999997 667889999999987642 48999
Q ss_pred EEEEcCC------cCcHHHHHHHHHhcCCCCcEEEE
Q 041509 114 FVLIDCN------LENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 114 ~VfiD~~------~~~y~~~l~~~~~~L~pgG~viv 143 (211)
+|+.+.- ......+++.+.+.|+|||.+++
T Consensus 132 ~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 132 VIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp EEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 9998751 13467788999999999887654
No 191
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.30 E-value=1.2e-11 Score=111.50 Aligned_cols=104 Identities=17% Similarity=0.080 Sum_probs=83.4
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhh---ccCCc
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLS---HFREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~---l~~~f 112 (211)
...+..+|||+ |||+|..++.||.. +++|+++|+++++++.|++|++ ....+++|+.+|+.+.++. ..++|
T Consensus 283 ~~~~~~~VLDl-gcG~G~~~~~la~~----~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~f 357 (433)
T 1uwv_A 283 DVQPEDRVLDL-FCGMGNFTLPLATQ----AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGF 357 (433)
T ss_dssp TCCTTCEEEEE-SCTTTTTHHHHHTT----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCC
T ss_pred cCCCCCEEEEC-CCCCCHHHHHHHhh----CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCC
Confidence 34466899999 99999999999864 5799999999999999999998 3335899999999886543 24689
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
|+|++|.+.....+.++.+.+ ++|++.+++..|
T Consensus 358 D~Vv~dPPr~g~~~~~~~l~~-~~p~~ivyvsc~ 390 (433)
T 1uwv_A 358 DKVLLDPARAGAAGVMQQIIK-LEPIRIVYVSCN 390 (433)
T ss_dssp SEEEECCCTTCCHHHHHHHHH-HCCSEEEEEESC
T ss_pred CEEEECCCCccHHHHHHHHHh-cCCCeEEEEECC
Confidence 999999887655566766664 678777777665
No 192
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.30 E-value=8e-12 Score=98.38 Aligned_cols=105 Identities=10% Similarity=0.026 Sum_probs=79.3
Q ss_pred hhHHHHHHHHHhh--CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH
Q 041509 26 PNEAEFISALAAG--NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS 103 (211)
Q Consensus 26 ~~~~~lL~~l~~~--~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e 103 (211)
|.+..++.. +.. .++++|||+ |||+|..++.++.. . +|+++|+++++++. ..+++++++|+.+
T Consensus 8 ~~~~~l~~~-l~~~~~~~~~vLD~-GcG~G~~~~~l~~~----~-~v~gvD~s~~~~~~--------~~~~~~~~~d~~~ 72 (170)
T 3q87_B 8 EDTYTLMDA-LEREGLEMKIVLDL-GTSTGVITEQLRKR----N-TVVSTDLNIRALES--------HRGGNLVRADLLC 72 (170)
T ss_dssp HHHHHHHHH-HHHHTCCSCEEEEE-TCTTCHHHHHHTTT----S-EEEEEESCHHHHHT--------CSSSCEEECSTTT
T ss_pred ccHHHHHHH-HHhhcCCCCeEEEe-ccCccHHHHHHHhc----C-cEEEEECCHHHHhc--------ccCCeEEECChhh
Confidence 444444444 444 677899999 99999999988753 3 99999999999987 3568999999987
Q ss_pred HhhhccCCccEEEEcCCcC------------cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 104 LLLSHFREADFVLIDCNLE------------NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 104 ~l~~l~~~fD~VfiD~~~~------------~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
.++ .++||+|+.+.... ...+.++.+.+.+ |||.+++.....
T Consensus 73 ~~~--~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~ 126 (170)
T 3q87_B 73 SIN--QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA 126 (170)
T ss_dssp TBC--GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG
T ss_pred hcc--cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC
Confidence 543 47999999976432 2356677777777 999998876544
No 193
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.30 E-value=1.9e-11 Score=105.95 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=95.5
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcc
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGD 100 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gd 100 (211)
..++.....++..++...+..+|||+ |||+|..|+.||+.+.. .++|+++|+++++++.+++|++ ....+|+++++|
T Consensus 84 ~~~Qd~~s~l~~~~l~~~~g~~VLDl-caG~G~kt~~la~~~~~-~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D 161 (309)
T 2b9e_A 84 LILQDRASCLPAMLLDPPPGSHVIDA-CAAPGNKTSHLAALLKN-QGKIFAFDLDAKRLASMATLLARAGVSCCELAEED 161 (309)
T ss_dssp EEECCTGGGHHHHHHCCCTTCEEEES-SCTTCHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred EEEECHHHHHHHHHhCCCCCCEEEEe-CCChhHHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34666666777777777788999999 69999999999988743 6999999999999999999998 223679999999
Q ss_pred hHHHhhhc--cCCccEEEEcCCcC--------------------c-------HHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 101 AQSLLLSH--FREADFVLIDCNLE--------------------N-------HEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 101 a~e~l~~l--~~~fD~VfiD~~~~--------------------~-------y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
+.+..+.. .++||.|++|++-. + +.+.++.+.++|+ ||.++.+...+.+
T Consensus 162 ~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 162 FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ 239 (309)
T ss_dssp GGGSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG
T ss_pred hHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh
Confidence 98865422 25799999995421 0 1235666666676 7887766665543
No 194
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.29 E-value=4.4e-12 Score=110.68 Aligned_cols=115 Identities=12% Similarity=0.097 Sum_probs=89.9
Q ss_pred HHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc
Q 041509 29 AEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 29 ~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l 108 (211)
.+++.......++.+|||+ |||+|..++++++..+ ..+|+++|+++.+++.|++++....-.++++.+|+.+..
T Consensus 185 ~~~ll~~l~~~~~~~VLDl-GcG~G~~~~~la~~~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--- 258 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDV-GCGAGVLSVAFARHSP--KIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--- 258 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBT-TCTTSHHHHHHHHHCT--TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC---
T ss_pred HHHHHHhcCcCCCCeEEEe-cCccCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc---
Confidence 3444444434456789999 9999999999998753 469999999999999999999721223677999987643
Q ss_pred cCCccEEEEcCCcC--------cHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 109 FREADFVLIDCNLE--------NHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 109 ~~~fD~VfiD~~~~--------~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
.++||+|+.+.... ....+++.+.+.|+|||.+++..|...
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 307 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFL 307 (343)
T ss_dssp CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTS
T ss_pred cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCC
Confidence 57999999986532 347789999999999999998887554
No 195
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.29 E-value=2.1e-11 Score=103.64 Aligned_cols=104 Identities=15% Similarity=0.095 Sum_probs=77.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeC-ChhHHHHHHHHh-----c--CCC----CcEEEEEcch----H
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILR-RVEEYKLSKKIL-----G--LDA----SHVEFVIGDA----Q 102 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~-~~~~~~~Ar~~~-----~--~~~----~~V~~~~gda----~ 102 (211)
.++++|||+ |||+|+.++.++.. ..++|+++|+ ++++++.|++|+ + +.. ++++++..+. .
T Consensus 78 ~~~~~vLDl-G~G~G~~~~~~a~~---~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~ 153 (281)
T 3bzb_A 78 IAGKTVCEL-GAGAGLVSIVAFLA---GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPD 153 (281)
T ss_dssp TTTCEEEET-TCTTSHHHHHHHHT---TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTH
T ss_pred cCCCeEEEe-cccccHHHHHHHHc---CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccH
Confidence 567899999 99999999988864 1359999999 899999999999 4 322 4788885442 2
Q ss_pred HHhhh-ccCCccEEEE-cCC--cCcHHHHHHHHHhcCC---C--CcEEEEEec
Q 041509 103 SLLLS-HFREADFVLI-DCN--LENHEGVLRAVQAGNK---P--NGAVVVGYN 146 (211)
Q Consensus 103 e~l~~-l~~~fD~Vfi-D~~--~~~y~~~l~~~~~~L~---p--gG~viv~dn 146 (211)
+.... ..++||+|+. |.- ..++..+++.+.++|+ | ||.++++-.
T Consensus 154 ~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 154 SLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp HHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred HHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 23221 1578999987 542 3467889999999999 9 998776544
No 196
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.29 E-value=1.1e-11 Score=107.25 Aligned_cols=103 Identities=13% Similarity=-0.021 Sum_probs=86.0
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
++.+|||+ |||+|..+..+++..+ +.+++.+|+ |++++.|++++. ++.++|+++.+|..+.++ .+||+|++
T Consensus 169 ~~~~vlDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p---~~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDV-GGGSGGLLSALLTAHE--DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLP---AGAGGYVL 241 (332)
T ss_dssp GGSEEEEE-TCTTSHHHHHHHHHCT--TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC---CSCSEEEE
T ss_pred CCCEEEEe-CCChhHHHHHHHHHCC--CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCC---CCCcEEEE
Confidence 36799999 9999999999999874 579999999 999999999987 567899999999974333 38999998
Q ss_pred cCC-----cCcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 118 DCN-----LENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 118 D~~-----~~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
-.- .+...+.++.+.+.|+|||.+++.|....
T Consensus 242 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 242 SAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred ehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 542 22357899999999999999999886554
No 197
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.29 E-value=1.4e-11 Score=107.12 Aligned_cols=105 Identities=14% Similarity=0.018 Sum_probs=87.4
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
+.+|||+ |||+|..+..+++..+ +.+++.+|. |++++.|++++. +..++|+++.+|..+..+...+.||+|++-
T Consensus 180 ~~~vlDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDL-AGGHGTYLAQVLRRHP--QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEE-TCTTCHHHHHHHHHCT--TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEE
T ss_pred CCEEEEe-CCCcCHHHHHHHHhCC--CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEe
Confidence 7899999 9999999999998874 589999999 899999999987 556789999999987642135679999986
Q ss_pred CCc-----CcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 119 CNL-----ENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 119 ~~~-----~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
.-. ++....++.+.+.|+|||.+++.+....
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 256 DCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 432 2347899999999999999999886654
No 198
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.28 E-value=1.1e-11 Score=107.59 Aligned_cols=105 Identities=11% Similarity=0.097 Sum_probs=82.8
Q ss_pred HHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhcc
Q 041509 32 ISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHF 109 (211)
Q Consensus 32 L~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~ 109 (211)
+.......++++|||+ |||+|..++.++++ ...+|+++|.+ ++++.|+++++ +..++|+++.+|+.+... ..
T Consensus 30 i~~~~~~~~~~~VLDi-GcGtG~ls~~la~~---g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~ 103 (328)
T 1g6q_1 30 IIQNKDLFKDKIVLDV-GCGTGILSMFAAKH---GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL-PF 103 (328)
T ss_dssp HHHHHHHHTTCEEEEE-TCTTSHHHHHHHHT---CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC-SS
T ss_pred HHhhHhhcCCCEEEEe-cCccHHHHHHHHHC---CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC-CC
Confidence 3333445677899999 99999999988875 24699999999 59999999987 667889999999987521 14
Q ss_pred CCccEEEEcCC------cCcHHHHHHHHHhcCCCCcEEE
Q 041509 110 READFVLIDCN------LENHEGVLRAVQAGNKPNGAVV 142 (211)
Q Consensus 110 ~~fD~VfiD~~------~~~y~~~l~~~~~~L~pgG~vi 142 (211)
++||+|+.+.. .......++.+.+.|+|||.++
T Consensus 104 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred CcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 78999998742 2345778888889999988765
No 199
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.28 E-value=4.2e-12 Score=104.86 Aligned_cols=112 Identities=18% Similarity=0.086 Sum_probs=82.6
Q ss_pred HHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCC-hhHHHHH---HHHhc-CCCCcEEEEEcchH
Q 041509 28 EAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRR-VEEYKLS---KKILG-LDASHVEFVIGDAQ 102 (211)
Q Consensus 28 ~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~-~~~~~~A---r~~~~-~~~~~V~~~~gda~ 102 (211)
..+++.... .++++|||| |||+|..++.|+... .+.+|++||++ +.+++.| +++.. ....+++++.+|+.
T Consensus 14 ~~~~~~~~~--~~~~~vLDi-GCG~G~~~~~la~~~--~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~ 88 (225)
T 3p2e_A 14 KDELTEIIG--QFDRVHIDL-GTGDGRNIYKLAIND--QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAE 88 (225)
T ss_dssp HHHHHHHHT--TCSEEEEEE-TCTTSHHHHHHHHTC--TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTT
T ss_pred HHHHHHHhC--CCCCEEEEE-eccCcHHHHHHHHhC--CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHH
Confidence 344444332 466789999 999999999998653 37899999999 6666666 77766 22357999999998
Q ss_pred HHhhhccCCccEEEEcCCcC--------cHHHHHHHHHhcCCCCcEEEEE
Q 041509 103 SLLLSHFREADFVLIDCNLE--------NHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~--------~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+......+.+|.|++..... .+.+.++++.++|+|||.++++
T Consensus 89 ~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 89 SLPFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp BCCGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred HhhhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 77322346788888764321 2457899999999999988773
No 200
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.28 E-value=1.3e-11 Score=107.96 Aligned_cols=101 Identities=8% Similarity=0.059 Sum_probs=82.2
Q ss_pred HhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCcc
Q 041509 36 AAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREAD 113 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD 113 (211)
....++++|||| |||+|..++.++++ ..++|++||.++ +++.|+++++ ++.++|+++.+|+.+.- +.++||
T Consensus 46 l~~~~~~~VLDi-GcGtG~ls~~la~~---g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~~~~~D 118 (348)
T 2y1w_A 46 HTDFKDKIVLDV-GCGSGILSFFAAQA---GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--LPEQVD 118 (348)
T ss_dssp GGGTTTCEEEEE-TCTTSHHHHHHHHT---TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--CSSCEE
T ss_pred cccCCcCEEEEc-CCCccHHHHHHHhC---CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC--CCCcee
Confidence 345678899999 99999999988874 246999999996 8899999987 66689999999998752 347899
Q ss_pred EEEEcCC-----cCcHHHHHHHHHhcCCCCcEEEE
Q 041509 114 FVLIDCN-----LENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 114 ~VfiD~~-----~~~y~~~l~~~~~~L~pgG~viv 143 (211)
+|+.+.. .+.+.+.+..+.+.|+|||.+++
T Consensus 119 ~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 119 IIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp EEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred EEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 9998753 23567788888999999887763
No 201
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.27 E-value=7.6e-12 Score=111.23 Aligned_cols=98 Identities=12% Similarity=0.115 Sum_probs=79.0
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..+.++|||| |||+|..++++|++- ..+|++||.++ +++.|+++++ ++.++|+++.+|+.++- +.+++|+|
T Consensus 81 ~~~~k~VLDv-G~GtGiLs~~Aa~aG---A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--lpe~~Dvi 153 (376)
T 4hc4_A 81 ALRGKTVLDV-GAGTGILSIFCAQAG---ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE--LPEQVDAI 153 (376)
T ss_dssp HHTTCEEEEE-TCTTSHHHHHHHHTT---CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC--CSSCEEEE
T ss_pred hcCCCEEEEe-CCCccHHHHHHHHhC---CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec--CCccccEE
Confidence 3577899999 999999998888752 46899999996 8899999998 77899999999998862 46899999
Q ss_pred EEcC------CcCcHHHHHHHHHhcCCCCcEEE
Q 041509 116 LIDC------NLENHEGVLRAVQAGNKPNGAVV 142 (211)
Q Consensus 116 fiD~------~~~~y~~~l~~~~~~L~pgG~vi 142 (211)
+... .......++....++|+|||.++
T Consensus 154 vsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 154 VSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp ECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred EeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 9742 12245777888888999977543
No 202
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.27 E-value=4e-12 Score=101.76 Aligned_cols=101 Identities=15% Similarity=0.046 Sum_probs=81.6
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
.++.+|||+ |||+|..+..++... ..+|+++|+++.+++.|++++.. ..+++++.+|+.+. +...++||+|+..
T Consensus 41 ~~~~~vLdi-GcG~G~~~~~l~~~~---~~~v~~~D~s~~~~~~a~~~~~~-~~~i~~~~~d~~~~-~~~~~~fD~v~~~ 114 (215)
T 2pxx_A 41 RPEDRILVL-GCGNSALSYELFLGG---FPNVTSVDYSSVVVAAMQACYAH-VPQLRWETMDVRKL-DFPSASFDVVLEK 114 (215)
T ss_dssp CTTCCEEEE-TCTTCSHHHHHHHTT---CCCEEEEESCHHHHHHHHHHTTT-CTTCEEEECCTTSC-CSCSSCEEEEEEE
T ss_pred CCCCeEEEE-CCCCcHHHHHHHHcC---CCcEEEEeCCHHHHHHHHHhccc-CCCcEEEEcchhcC-CCCCCcccEEEEC
Confidence 456789999 999999999998752 23899999999999999999874 35799999999875 3225789999975
Q ss_pred CCc------------------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 119 CNL------------------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 119 ~~~------------------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
... .+....++.+.+.|+|||.+++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 115 GTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp SHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 321 245788999999999999888866
No 203
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.27 E-value=6.6e-11 Score=94.64 Aligned_cols=124 Identities=11% Similarity=0.070 Sum_probs=88.0
Q ss_pred HHHHHHHHHhhcC--------CcCCChhHHHHHHHHHh---hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCC
Q 041509 8 NATKAYLKTLKMG--------QKAKEPNEAEFISALAA---GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRR 76 (211)
Q Consensus 8 ~~~~ay~~~~~~~--------~~~~~~~~~~lL~~l~~---~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~ 76 (211)
.....|+..+... +....+..++.+..++. ..++++|||+ |||+|..++.++.. ...+|+++|++
T Consensus 8 ~~le~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlD~-gcG~G~~~~~l~~~---~~~~v~~vD~~ 83 (200)
T 1ne2_A 8 NDLEIRLQKLQQQGNFKNYLEQYPTDASTAAYFLIEIYNDGNIGGRSVIDA-GTGNGILACGSYLL---GAESVTAFDID 83 (200)
T ss_dssp HHHHHHHHTSCCCC--------CCCCHHHHHHHHHHHHHHTSSBTSEEEEE-TCTTCHHHHHHHHT---TBSEEEEEESC
T ss_pred HHHHHHHHhcCCCCccccceeecCCCHHHHHHHHHHHHhcCCCCCCEEEEE-eCCccHHHHHHHHc---CCCEEEEEECC
Confidence 3455666654321 12344555554444443 3467899999 99999999999875 24689999999
Q ss_pred hhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 77 VEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 77 ~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+++++.|++++. +++++++|+.+. .++||+|++|.... ...++++.+.+.+ |.++++.+
T Consensus 84 ~~~~~~a~~~~~----~~~~~~~d~~~~----~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~~~ 147 (200)
T 1ne2_A 84 PDAIETAKRNCG----GVNFMVADVSEI----SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS---MWIYSIGN 147 (200)
T ss_dssp HHHHHHHHHHCT----TSEEEECCGGGC----CCCEEEEEECCCC-------CHHHHHHHHHHE---EEEEEEEE
T ss_pred HHHHHHHHHhcC----CCEEEECcHHHC----CCCeeEEEECCCchhccCchhHHHHHHHHHhc---CcEEEEEc
Confidence 999999999976 789999999874 37899999997632 2356788888876 44555554
No 204
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.27 E-value=8.1e-12 Score=102.11 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=78.3
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDC 119 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~ 119 (211)
+..+|||+ |||+|..+..++.. .+++++|+++++++.|++++.....+++++.+|+.+.. ..++||+|++..
T Consensus 33 ~~~~vLdi-G~G~G~~~~~l~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~ 104 (243)
T 3d2l_A 33 PGKRIADI-GCGTGTATLLLADH-----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE--LPEPVDAITILC 104 (243)
T ss_dssp TTCEEEEE-SCTTCHHHHHHTTT-----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC--CSSCEEEEEECT
T ss_pred CCCeEEEe-cCCCCHHHHHHhhC-----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC--CCCCcCEEEEeC
Confidence 45789999 99999998888753 69999999999999999998722357999999998752 247899999865
Q ss_pred C-------cCcHHHHHHHHHhcCCCCcEEEE
Q 041509 120 N-------LENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 120 ~-------~~~y~~~l~~~~~~L~pgG~viv 143 (211)
+ ..+....++.+.+.|+|||.+++
T Consensus 105 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 105 DSLNYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp TGGGGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CchhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 2 13457789999999999887766
No 205
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.27 E-value=2.4e-11 Score=95.40 Aligned_cols=105 Identities=17% Similarity=0.197 Sum_probs=83.8
Q ss_pred HHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc
Q 041509 29 AEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 29 ~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l 108 (211)
.+++..+ ..++.+|||+ |||+|..+..++.. +.+++++|+++++++.|++++. +++++.+|+.+. +..
T Consensus 37 ~~~l~~~--~~~~~~vLdi-G~G~G~~~~~l~~~----~~~v~~~D~~~~~~~~a~~~~~----~~~~~~~d~~~~-~~~ 104 (195)
T 3cgg_A 37 ARLIDAM--APRGAKILDA-GCGQGRIGGYLSKQ----GHDVLGTDLDPILIDYAKQDFP----EARWVVGDLSVD-QIS 104 (195)
T ss_dssp HHHHHHH--SCTTCEEEEE-TCTTTHHHHHHHHT----TCEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTS-CCC
T ss_pred HHHHHHh--ccCCCeEEEE-CCCCCHHHHHHHHC----CCcEEEEcCCHHHHHHHHHhCC----CCcEEEcccccC-CCC
Confidence 4566665 3467899999 99999999998875 5699999999999999999864 488999999874 212
Q ss_pred cCCccEEEEcCCc------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 109 FREADFVLIDCNL------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 109 ~~~fD~VfiD~~~------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.++||+|++.+.. ++....++.+.+.|+|||.+++..
T Consensus 105 ~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 105 ETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp CCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 5789999997432 234788999999999988887754
No 206
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.26 E-value=1.1e-11 Score=111.07 Aligned_cols=98 Identities=13% Similarity=0.131 Sum_probs=75.8
Q ss_pred CCCeEEEEcccc------HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH--hhh---c
Q 041509 40 NAQLMVVACANV------ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL--LLS---H 108 (211)
Q Consensus 40 ~~~~VLEi~Gtg------~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~--l~~---l 108 (211)
++.+|||| ||| +|..++.+++... ++++|++||+++++. . ...+|+|++||+.+. +.. .
T Consensus 216 ~~~rVLDI-GCG~~~~~~TGG~Sl~la~~~f-P~a~V~GVDiSp~m~------~--~~~rI~fv~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 216 QQVRVLEI-GVGGYKHPEWGGGSLRMWKSFF-PRGQIYGLDIMDKSH------V--DELRIRTIQGDQNDAEFLDRIARR 285 (419)
T ss_dssp SCCEEEEE-CCSCTTCSSCCCHHHHHHHHHC-TTCEEEEEESSCCGG------G--CBTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEE-ecCCCcCCCCCHHHHHHHHHhC-CCCEEEEEECCHHHh------h--cCCCcEEEEecccccchhhhhhcc
Confidence 67899999 999 7777888887653 378999999999972 1 246899999999764 211 1
Q ss_pred cCCccEEEEcCCcC--cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 109 FREADFVLIDCNLE--NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 109 ~~~fD~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
.++||+|+.|+.+. ++...++++.+.|+|||.+++ +++.
T Consensus 286 d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi-~Dl~ 326 (419)
T 3sso_A 286 YGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVI-EDMW 326 (419)
T ss_dssp HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEE-ECGG
T ss_pred cCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEE-Eecc
Confidence 58999999997653 568899999999999876666 4443
No 207
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.26 E-value=1.7e-10 Score=92.42 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=83.7
Q ss_pred CCChhHHHHHHHHHh---hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEE
Q 041509 23 AKEPNEAEFISALAA---GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFV 97 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~---~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~ 97 (211)
...+..++.+...+. ..++++|||+ |||+|..++.++.. ...+|+++|+++.+++.|+++++ +. +++++
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~~~vlD~-g~G~G~~~~~l~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~ 102 (207)
T 1wy7_A 29 RTPGNAASELLWLAYSLGDIEGKVVADL-GAGTGVLSYGALLL---GAKEVICVEVDKEAVDVLIENLGEFKG--KFKVF 102 (207)
T ss_dssp CCCHHHHHHHHHHHHHTTSSTTCEEEEE-TCTTCHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEE
T ss_pred cCchHHHHHHHHHHHHcCCCCcCEEEEe-eCCCCHHHHHHHHc---CCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEE
Confidence 455556655554443 3467899999 99999999999875 14589999999999999999998 43 79999
Q ss_pred EcchHHHhhhccCCccEEEEcCCc-----CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 98 IGDAQSLLLSHFREADFVLIDCNL-----ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 98 ~gda~e~l~~l~~~fD~VfiD~~~-----~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
++|+.+. .++||+|++|.+. .....+++.+.+.+ |+ +++..
T Consensus 103 ~~d~~~~----~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~-~~~~~ 148 (207)
T 1wy7_A 103 IGDVSEF----NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DV-VYSIH 148 (207)
T ss_dssp ESCGGGC----CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SE-EEEEE
T ss_pred ECchHHc----CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--Cc-EEEEE
Confidence 9999874 3589999999752 24467888888877 44 44433
No 208
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.25 E-value=3e-11 Score=103.95 Aligned_cols=105 Identities=16% Similarity=0.073 Sum_probs=86.5
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
.++.+|||+ |||+|..+..+++..+ +.+++++|++ .+++.|++++. +..++|+++.+|+.+. + ..+.||+|+
T Consensus 164 ~~~~~vlDv-G~G~G~~~~~l~~~~p--~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~~~~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDI-SASHGLFGIAVAQHNP--NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV-D-YGNDYDLVL 237 (335)
T ss_dssp CCCSEEEEE-TCTTCHHHHHHHHHCT--TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS-C-CCSCEEEEE
T ss_pred CCCCEEEEE-CCCcCHHHHHHHHHCC--CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC-C-CCCCCcEEE
Confidence 567899999 9999999999998874 5799999999 99999999987 6667899999999764 2 244599999
Q ss_pred EcCCc-----CcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 117 IDCNL-----ENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 117 iD~~~-----~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
+.... ++..+.++.+.+.|+|||.+++.+....
T Consensus 238 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 238 LPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred EcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 85422 3457899999999999998888876543
No 209
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.24 E-value=1.2e-10 Score=101.73 Aligned_cols=104 Identities=12% Similarity=-0.034 Sum_probs=86.1
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++.+|||+ |||+|..+..+++..+ +.+++++|+ |++++.|+++++ +..++|+++.+|+.+. + ...+|+|
T Consensus 188 ~~~~~~vLDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~~~~D~v 260 (359)
T 1x19_A 188 LDGVKKMIDV-GGGIGDISAAMLKHFP--ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE-S--YPEADAV 260 (359)
T ss_dssp CTTCCEEEEE-SCTTCHHHHHHHHHCT--TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS-C--CCCCSEE
T ss_pred CCCCCEEEEE-CCcccHHHHHHHHHCC--CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC-C--CCCCCEE
Confidence 4567899999 9999999999999864 679999999 999999999987 5667899999999865 2 2344999
Q ss_pred EEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 116 LIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 116 fiD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
++..-.. ...+.++.+.+.|+|||.+++.+...
T Consensus 261 ~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 261 LFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred EEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 9865332 35778999999999999998888554
No 210
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.24 E-value=2e-11 Score=106.83 Aligned_cols=102 Identities=19% Similarity=0.100 Sum_probs=85.0
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++.+|||+ |||+|..+..+++..+ +.+++++|+ +++++.|++++. ++.++|+++.+|+.+.++ ..||+|
T Consensus 180 ~~~~~~vlDv-G~G~G~~~~~l~~~~~--~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~D~v 252 (374)
T 1qzz_A 180 WSAVRHVLDV-GGGNGGMLAAIALRAP--HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP---VTADVV 252 (374)
T ss_dssp CTTCCEEEEE-TCTTSHHHHHHHHHCT--TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---CCEEEE
T ss_pred CCCCCEEEEE-CCCcCHHHHHHHHHCC--CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC---CCCCEE
Confidence 3467899999 9999999999998874 579999999 999999999987 566789999999976433 359999
Q ss_pred EEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
++..-.. .....++.+.+.|+|||.+++.+.
T Consensus 253 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 253 LLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9865332 235789999999999998888876
No 211
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.24 E-value=1e-11 Score=99.90 Aligned_cols=94 Identities=19% Similarity=0.133 Sum_probs=77.1
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDC 119 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~ 119 (211)
++.+|||+ |||+|..+..+ . ..+++++|+++++++.|++++ .+++++.+|+.+. +...++||+|++..
T Consensus 36 ~~~~vLdi-G~G~G~~~~~l----~--~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~-~~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEV-GAGTGYWLRRL----P--YPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEAL-PFPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEE-TCTTCHHHHHC----C--CSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSC-CSCSSCEEEEEEES
T ss_pred CCCeEEEE-CCCCCHhHHhC----C--CCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccC-CCCCCcEEEEEEcC
Confidence 67899999 99999987766 1 239999999999999999986 5688999998764 32257899999876
Q ss_pred Cc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 120 NL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 120 ~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.. .+..+.++.+.+.|+|||.+++.+
T Consensus 104 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 104 TLEFVEDVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp CTTTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 43 367889999999999999888765
No 212
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.24 E-value=8e-12 Score=103.41 Aligned_cols=103 Identities=16% Similarity=0.063 Sum_probs=80.9
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCC---------------------------
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDA--------------------------- 91 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~--------------------------- 91 (211)
.++++|||+ |||+|..+..++... ..+|+++|+++.+++.|++++....
T Consensus 55 ~~~~~vLDl-GcG~G~~~~~l~~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 55 VKGELLIDI-GSGPTIYQLLSACES---FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp CCEEEEEEE-SCTTCCGGGTTGGGT---EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred cCCCEEEEE-CCCccHHHHHHhhcc---cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 456789999 999999888877542 2489999999999999999887211
Q ss_pred ---CcE-EEEEcchHHHhhhcc---CCccEEEEcCCcC-------cHHHHHHHHHhcCCCCcEEEEEe
Q 041509 92 ---SHV-EFVIGDAQSLLLSHF---READFVLIDCNLE-------NHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 92 ---~~V-~~~~gda~e~l~~l~---~~fD~VfiD~~~~-------~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.++ +++.+|+.+..+... ++||+|+...... ++...++.+.++|+|||.+++.+
T Consensus 131 ~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 138 999999987643223 7899999865432 57889999999999998888765
No 213
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.23 E-value=4.3e-11 Score=103.27 Aligned_cols=101 Identities=20% Similarity=0.162 Sum_probs=85.1
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEEEcC
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVLIDC 119 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~ 119 (211)
.+|||+ |||+|..+..+++..+ +.+++++|+ |++++.|++++. +..++|+++.+|..+. +.++||+|++..
T Consensus 169 ~~vlDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDV-GGGSGELTKAILQAEP--SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---VPSNGDIYLLSR 241 (334)
T ss_dssp CEEEEE-TCTTCHHHHHHHHHCT--TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---CCSSCSEEEEES
T ss_pred CEEEEe-CCCchHHHHHHHHHCC--CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---CCCCCCEEEEch
Confidence 899999 9999999999998874 579999999 999999999987 5567899999999873 246799999865
Q ss_pred CcC-----cHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 120 NLE-----NHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 120 ~~~-----~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
-.. .....++.+.+.|+|||.+++.|....
T Consensus 242 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 242 IIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp CGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 432 335889999999999999999886654
No 214
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.23 E-value=1.9e-11 Score=94.15 Aligned_cols=103 Identities=17% Similarity=0.108 Sum_probs=77.4
Q ss_pred HHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHh-----
Q 041509 31 FISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLL----- 105 (211)
Q Consensus 31 lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l----- 105 (211)
++..+....++.+|||+ |||+|..+.++++..++ +.+++++|.++ +.+. .+++++.+|+.+.-
T Consensus 13 ~~~~~~~~~~~~~vLd~-G~G~G~~~~~l~~~~~~-~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~ 80 (180)
T 1ej0_A 13 IQQSDKLFKPGMTVVDL-GAAPGGWSQYVVTQIGG-KGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKAL 80 (180)
T ss_dssp HHHHHCCCCTTCEEEEE-SCTTCHHHHHHHHHHCT-TCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHH
T ss_pred HHHHhCCCCCCCeEEEe-CCCCCHHHHHHHHHhCC-CCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhh
Confidence 33333334567899999 99999999999988643 58999999999 6432 57999999997652
Q ss_pred hh-c-cCCccEEEEcCCcC---cH-----------HHHHHHHHhcCCCCcEEEEEe
Q 041509 106 LS-H-FREADFVLIDCNLE---NH-----------EGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 106 ~~-l-~~~fD~VfiD~~~~---~y-----------~~~l~~~~~~L~pgG~viv~d 145 (211)
+. + .++||+|+.+.... .. ...++.+.+.|+|||.+++..
T Consensus 81 ~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 81 LERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 11 1 46899999986432 22 578999999999988887754
No 215
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.23 E-value=2e-10 Score=97.51 Aligned_cols=105 Identities=10% Similarity=0.038 Sum_probs=81.8
Q ss_pred CCCCeEEEEccccH---HHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHh---------h
Q 041509 39 NNAQLMVVACANVA---NATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLL---------L 106 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~---G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l---------~ 106 (211)
....+|||| |||+ |..+..+++.. ++++|+++|.+|.+++.|++++.. ..+++++.+|+.+.- .
T Consensus 76 ~~~~~vLDl-GcG~pt~G~~~~~~~~~~--p~~~v~~vD~sp~~l~~Ar~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~ 151 (274)
T 2qe6_A 76 AGISQFLDL-GSGLPTVQNTHEVAQSVN--PDARVVYVDIDPMVLTHGRALLAK-DPNTAVFTADVRDPEYILNHPDVRR 151 (274)
T ss_dssp TCCCEEEEE-TCCSCCSSCHHHHHHHHC--TTCEEEEEESSHHHHHHHHHHHTT-CTTEEEEECCTTCHHHHHHSHHHHH
T ss_pred cCCCEEEEE-CCCCCCCChHHHHHHHhC--CCCEEEEEECChHHHHHHHHhcCC-CCCeEEEEeeCCCchhhhccchhhc
Confidence 345799999 9999 98766555544 268999999999999999999863 367999999986531 1
Q ss_pred hc-cCCccEEEEcCC-----cCcHHHHHHHHHhcCCCCcEEEEEecC
Q 041509 107 SH-FREADFVLIDCN-----LENHEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 107 ~l-~~~fD~VfiD~~-----~~~y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
.+ .++||+|++..- ..+....++.+.+.|+|||.+++.+..
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred cCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 12 258999998752 224788999999999999999887754
No 216
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.23 E-value=3.3e-11 Score=104.98 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=85.4
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++.+|||+ |||+|..+..+++..+ +.+++.+|+ +++++.|++++. +..++|+++.+|+.+.++ ..||+|
T Consensus 181 ~~~~~~vLDv-G~G~G~~~~~l~~~~~--~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~D~v 253 (360)
T 1tw3_A 181 WTNVRHVLDV-GGGKGGFAAAIARRAP--HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP---RKADAI 253 (360)
T ss_dssp CTTCSEEEEE-TCTTSHHHHHHHHHCT--TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---SCEEEE
T ss_pred CccCcEEEEe-CCcCcHHHHHHHHhCC--CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC---CCccEE
Confidence 3467899999 9999999999998864 579999999 999999999987 566789999999976433 359999
Q ss_pred EEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEecC
Q 041509 116 LIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 116 fiD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
++..-.. +..+.++.+.+.|+|||.+++.+..
T Consensus 254 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 254 ILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9865432 2357899999999999989888866
No 217
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.23 E-value=3.2e-11 Score=98.28 Aligned_cols=95 Identities=16% Similarity=0.122 Sum_probs=77.6
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
.++.+|||+ |||+|..+..++... .+++++|+++++++.|++++ .+++++.+|+.+. + ..++||+|+..
T Consensus 39 ~~~~~vLdi-G~G~G~~~~~l~~~~----~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~-~-~~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDV-ACGTGTHLEHFTKEF----GDTAGLELSEDMLTHARKRL----PDATLHQGDMRDF-R-LGRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEE-TCTTSHHHHHHHHHH----SEEEEEESCHHHHHHHHHHC----TTCEEEECCTTTC-C-CSSCEEEEEEC
T ss_pred CCCCeEEEe-cccCCHHHHHHHHhC----CcEEEEeCCHHHHHHHHHhC----CCCEEEECCHHHc-c-cCCCCcEEEEc
Confidence 467899999 999999999998874 38999999999999999885 3589999999875 3 26789999943
Q ss_pred CC-------cCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 119 CN-------LENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 119 ~~-------~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.. ..+....++.+.+.|+|||.+++.
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 31 134578899999999998877763
No 218
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.20 E-value=4.2e-11 Score=99.82 Aligned_cols=95 Identities=17% Similarity=0.110 Sum_probs=77.2
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDC 119 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~ 119 (211)
++.+|||+ |||+|..+..++.. +.+|+++|+++++++.|+++... + ++.+|+.+. +...++||+|++..
T Consensus 54 ~~~~vLDi-GcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~---~--~~~~d~~~~-~~~~~~fD~v~~~~ 122 (260)
T 2avn_A 54 NPCRVLDL-GGGTGKWSLFLQER----GFEVVLVDPSKEMLEVAREKGVK---N--VVEAKAEDL-PFPSGAFEAVLALG 122 (260)
T ss_dssp SCCEEEEE-TCTTCHHHHHHHTT----TCEEEEEESCHHHHHHHHHHTCS---C--EEECCTTSC-CSCTTCEEEEEECS
T ss_pred CCCeEEEe-CCCcCHHHHHHHHc----CCeEEEEeCCHHHHHHHHhhcCC---C--EEECcHHHC-CCCCCCEEEEEEcc
Confidence 67899999 99999999988864 57999999999999999988652 2 889998764 32257899999865
Q ss_pred Cc----CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 120 NL----ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 120 ~~----~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.. .+....++.+.+.|+|||.+++..
T Consensus 123 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 123 DVLSYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp SHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 32 346889999999999988877643
No 219
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.20 E-value=1.1e-10 Score=99.99 Aligned_cols=102 Identities=14% Similarity=0.039 Sum_probs=80.8
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--C------CCCcEEEEEcchHHHh-----h
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--L------DASHVEFVIGDAQSLL-----L 106 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~------~~~~V~~~~gda~e~l-----~ 106 (211)
++.+|||+ |||+|..+..++.. ...+++++|+++++++.|++++. + ...+++++++|+.+.. +
T Consensus 34 ~~~~VLDl-GcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 109 (313)
T 3bgv_A 34 RDITVLDL-GCGKGGDLLKWKKG---RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR 109 (313)
T ss_dssp -CCEEEEE-TCTTTTTHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS
T ss_pred CCCEEEEE-CCCCcHHHHHHHhc---CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc
Confidence 67899999 99999999988863 26799999999999999999886 1 3458999999998752 1
Q ss_pred hccCCccEEEEcCCc-------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 107 SHFREADFVLIDCNL-------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 107 ~l~~~fD~VfiD~~~-------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
...++||+|+..... .+....++.+.+.|+|||.+++..
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 110 DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 113589999987543 234689999999999988877654
No 220
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.19 E-value=3.6e-11 Score=109.91 Aligned_cols=99 Identities=8% Similarity=0.061 Sum_probs=79.7
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..++++|||| |||+|..++.+++. ...+|+++|+++ +++.|+++++ ++.++|+++.+|+.+. + +.++||+|
T Consensus 156 ~~~~~~VLDi-GcGtG~la~~la~~---~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~-~-~~~~fD~I 228 (480)
T 3b3j_A 156 DFKDKIVLDV-GCGSGILSFFAAQA---GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV-S-LPEQVDII 228 (480)
T ss_dssp GTTTCEEEEE-SCSTTHHHHHHHHT---TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC-C-CSSCEEEE
T ss_pred hcCCCEEEEe-cCcccHHHHHHHHc---CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC-c-cCCCeEEE
Confidence 3467899999 99999999988863 257999999998 9999999987 6668999999999874 2 34689999
Q ss_pred EEcCC-----cCcHHHHHHHHHhcCCCCcEEEE
Q 041509 116 LIDCN-----LENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 116 fiD~~-----~~~y~~~l~~~~~~L~pgG~viv 143 (211)
+.+.. .+.+.+.+..+.+.|+|||.+++
T Consensus 229 vs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 229 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp ECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 98754 13446667777889999887763
No 221
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.18 E-value=6.7e-11 Score=96.11 Aligned_cols=113 Identities=11% Similarity=-0.041 Sum_probs=82.1
Q ss_pred hhHHHHHHHHHhh-CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchH
Q 041509 26 PNEAEFISALAAG-NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQ 102 (211)
Q Consensus 26 ~~~~~lL~~l~~~-~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~ 102 (211)
|.--+|....... .++.+|||+ |||+|..++.++...+ +.+++++|+|+.|++.|+++++ +...++++ .|..
T Consensus 34 p~ld~fY~~~~~~l~~~~~VLDl-GCG~GplAl~l~~~~p--~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~ 108 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKHVSSILDF-GCGFNPLALYQWNENE--KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKE 108 (200)
T ss_dssp GGHHHHHHHHHHHSCCCSEEEEE-TCTTHHHHHHHHCSSC--CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCH
T ss_pred HhHHHHHHHHHhhcCCCCeEEEe-cCCCCHHHHHHHhcCC--CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccc
Confidence 5555555554332 568999999 9999999999887654 4699999999999999999998 55557877 6665
Q ss_pred HHhhhccCCccEEEEcCCcC---cHHHHHHHHHhcCCCCcEEEEEe
Q 041509 103 SLLLSHFREADFVLIDCNLE---NHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~---~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+..+ .++||+|++---.. +-...+..+.+.|+|||.+|-++
T Consensus 109 ~~~~--~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 109 SDVY--KGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHT--TSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred ccCC--CCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 5433 57899998643221 11223446778899988777666
No 222
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.18 E-value=1.5e-10 Score=98.71 Aligned_cols=96 Identities=18% Similarity=0.105 Sum_probs=77.2
Q ss_pred cCCcC-CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEE
Q 041509 19 MGQKA-KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVE 95 (211)
Q Consensus 19 ~~~~~-~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~ 95 (211)
.++.. ..+...+.+...+...++.+|||| |||+|..|..|+.. +++|++||+|+.+++.|++++. +..++++
T Consensus 6 ~gq~fl~d~~i~~~i~~~~~~~~~~~VLDi-G~G~G~lt~~L~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~ 80 (285)
T 1zq9_A 6 IGQHILKNPLIINSIIDKAALRPTDVVLEV-GPGTGNMTVKLLEK----AKKVVACELDPRLVAELHKRVQGTPVASKLQ 80 (285)
T ss_dssp --CCEECCHHHHHHHHHHTCCCTTCEEEEE-CCTTSTTHHHHHHH----SSEEEEEESCHHHHHHHHHHHTTSTTGGGEE
T ss_pred CCcCccCCHHHHHHHHHhcCCCCCCEEEEE-cCcccHHHHHHHhh----CCEEEEEECCHHHHHHHHHHHHhcCCCCceE
Confidence 34544 477777777777777778899999 99999999999986 4699999999999999999987 3346899
Q ss_pred EEEcchHHHhhhccCCccEEEEcCCcC
Q 041509 96 FVIGDAQSLLLSHFREADFVLIDCNLE 122 (211)
Q Consensus 96 ~~~gda~e~l~~l~~~fD~VfiD~~~~ 122 (211)
++++|+.+. + ...||.|+.+....
T Consensus 81 ~~~~D~~~~-~--~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 81 VLVGDVLKT-D--LPFFDTCVANLPYQ 104 (285)
T ss_dssp EEESCTTTS-C--CCCCSEEEEECCGG
T ss_pred EEEcceecc-c--chhhcEEEEecCcc
Confidence 999999875 2 24799999876543
No 223
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.18 E-value=6.9e-11 Score=100.35 Aligned_cols=106 Identities=9% Similarity=0.103 Sum_probs=77.5
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHcc--CCCcEE--EEEeCChhHHHHHHHHhc--CCCCcE--EEEEcchHHHhh----
Q 041509 39 NNAQLMVVACANVANATTLALAAAAH--QTGGRV--VCILRRVEEYKLSKKILG--LDASHV--EFVIGDAQSLLL---- 106 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~--~~~g~v--~tiE~~~~~~~~Ar~~~~--~~~~~V--~~~~gda~e~l~---- 106 (211)
.++.+|||| |||+|..|..++..+. .++.+| +++|++++|++.|+++++ ....++ ++..+++.+...
T Consensus 51 ~~~~~VLDi-G~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSI-GGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEE-TCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEE-cCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 345689999 9999988765543321 124554 999999999999999986 223444 456777776542
Q ss_pred -hccCCccEEEEcCC---cCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 107 -SHFREADFVLIDCN---LENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 107 -~l~~~fD~VfiD~~---~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
..+++||+|+.-.. ..+....++.+.++|+|||.+++..
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 12578999998753 3467889999999999999888764
No 224
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.18 E-value=1.6e-10 Score=111.21 Aligned_cols=112 Identities=12% Similarity=0.030 Sum_probs=86.3
Q ss_pred HHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--C-----CCCcEEEEEcchH
Q 041509 30 EFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--L-----DASHVEFVIGDAQ 102 (211)
Q Consensus 30 ~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~-----~~~~V~~~~gda~ 102 (211)
+++..++...++.+|||+ |||+|+.+..|++..+ +..+|++||+++++++.|+++++ . ...+|+|++||+.
T Consensus 711 e~LLelL~~~~g~rVLDV-GCGTG~lai~LAr~g~-p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~ 788 (950)
T 3htx_A 711 EYALKHIRESSASTLVDF-GCGSGSLLDSLLDYPT-SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL 788 (950)
T ss_dssp HHHHHHHHHSCCSEEEEE-TCSSSHHHHHHTSSCC-CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT
T ss_pred HHHHHHhcccCCCEEEEE-CCCCCHHHHHHHHhCC-CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH
Confidence 344455566688999999 9999999999987642 24799999999999999999664 1 1358999999998
Q ss_pred HHhhhccCCccEEEEcCCcCc-----HHHHHHHHHhcCCCCcEEEEEe
Q 041509 103 SLLLSHFREADFVLIDCNLEN-----HEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~~-----y~~~l~~~~~~L~pgG~viv~d 145 (211)
+... ..++||+|++..-... ...+++.+.+.|+|| .+++..
T Consensus 789 dLp~-~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 789 EFDS-RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp SCCT-TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred hCCc-ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 8533 3689999998765442 345889999999996 666543
No 225
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.16 E-value=5.8e-11 Score=100.43 Aligned_cols=102 Identities=10% Similarity=-0.031 Sum_probs=74.8
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC-------------------C---------
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD-------------------A--------- 91 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~-------------------~--------- 91 (211)
++.+|||+ |||+|..++.++. . .+.+|+++|+++++++.|+++++.. .
T Consensus 71 ~~~~vLDi-GcG~G~~~~l~~~-~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 146 (289)
T 2g72_A 71 SGRTLIDI-GSGPTVYQLLSAC-S--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQ 146 (289)
T ss_dssp CCSEEEEE-TCTTCCGGGTTGG-G--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred CCCeEEEE-CCCcChHHHHhhc-c--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHH
Confidence 67899999 9999994443332 1 2579999999999999999876410 0
Q ss_pred ---CcEEEEEcchHHHhhh----c-cCCccEEEEcCCc-------CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 92 ---SHVEFVIGDAQSLLLS----H-FREADFVLIDCNL-------ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 92 ---~~V~~~~gda~e~l~~----l-~~~fD~VfiD~~~-------~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
..++++.+|+.+.++. + .++||+|+..... .++...++.+.++|+|||.+++.+
T Consensus 147 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 147 LRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 0267788898774331 1 3569999987532 257889999999999999888764
No 226
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.15 E-value=1.6e-10 Score=99.44 Aligned_cols=102 Identities=8% Similarity=0.016 Sum_probs=73.1
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCC-----cEEEEEcch------HHHhh
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDAS-----HVEFVIGDA------QSLLL 106 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~-----~V~~~~gda------~e~l~ 106 (211)
++.+|||+ |||+|..+..++.. ..++|++||++++|++.|++... +... ++++.++|+ .++..
T Consensus 48 ~~~~VLDl-GCG~G~~l~~~~~~---~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~ 123 (302)
T 2vdw_A 48 NKRKVLAI-DFGNGADLEKYFYG---EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE 123 (302)
T ss_dssp SCCEEEET-TCTTTTTHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT
T ss_pred CCCeEEEE-ecCCcHhHHHHHhc---CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc
Confidence 35789999 99999644434332 25799999999999999999876 3211 377888877 33221
Q ss_pred h-ccCCccEEEEcCC------cCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 107 S-HFREADFVLIDCN------LENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 107 ~-l~~~fD~VfiD~~------~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
. ..++||+|+.-.. .++....++.+.++|+|||.+++..
T Consensus 124 ~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 1 2579999986432 1355789999999999988877644
No 227
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.15 E-value=3.1e-11 Score=101.99 Aligned_cols=87 Identities=15% Similarity=0.130 Sum_probs=71.0
Q ss_pred HHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCCh-------hHHHHHHHHhc--CCCCcEEEEEc
Q 041509 29 AEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRV-------EEYKLSKKILG--LDASHVEFVIG 99 (211)
Q Consensus 29 ~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~-------~~~~~Ar~~~~--~~~~~V~~~~g 99 (211)
.+++...+...+..+|||+ |||+|..|+++|.. +++|+++|+++ ++++.|++|.+ +..++|+++++
T Consensus 72 ~~~l~~a~~~~~~~~VLDl-gcG~G~~a~~lA~~----g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~ 146 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDA-TAGLGRDSFVLASL----GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFG 146 (258)
T ss_dssp -CHHHHHTTGGGCCCEEET-TCTTCHHHHHHHHT----TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEES
T ss_pred hHHHHHHhCcCCcCeEEEe-eCccCHHHHHHHHh----CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEEC
Confidence 3455555555556889999 89999999999973 57999999999 99999999887 44567999999
Q ss_pred chHHHhhhcc---CCccEEEEcCC
Q 041509 100 DAQSLLLSHF---READFVLIDCN 120 (211)
Q Consensus 100 da~e~l~~l~---~~fD~VfiD~~ 120 (211)
|+.+.++.+. ++||+|++|..
T Consensus 147 d~~~~l~~~~~~~~~fD~V~~dP~ 170 (258)
T 2r6z_A 147 NAAEQMPALVKTQGKPDIVYLDPM 170 (258)
T ss_dssp CHHHHHHHHHHHHCCCSEEEECCC
T ss_pred CHHHHHHhhhccCCCccEEEECCC
Confidence 9999876543 79999999963
No 228
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.15 E-value=3.9e-11 Score=100.65 Aligned_cols=103 Identities=15% Similarity=0.017 Sum_probs=75.8
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC----------------------------
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD---------------------------- 90 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~---------------------------- 90 (211)
.++++|||| |||+|..++.++.. ...+|+++|+++.|++.|+++++..
T Consensus 54 ~~g~~vLDi-GCG~G~~~~~~~~~---~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 54 LQGDTLIDI-GSGPTIYQVLAACD---SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp CCEEEEEES-SCTTCCGGGTTGGG---TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCceEEEe-CCCccHHHHHHHHh---hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 456789999 99999765554422 1357999999999999999987511
Q ss_pred --CCcEE-EEEcchHHHhhh---ccCCccEEEEcCC-------cCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 91 --ASHVE-FVIGDAQSLLLS---HFREADFVLIDCN-------LENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 91 --~~~V~-~~~gda~e~l~~---l~~~fD~VfiD~~-------~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
..+|+ ++.+|..+..+. ..++||+|+.-.- .+++...++.+.++|+|||.+++.+
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 11354 899998874331 1468999998632 2456788999999999999888764
No 229
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.15 E-value=1e-10 Score=97.58 Aligned_cols=96 Identities=16% Similarity=0.038 Sum_probs=77.8
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
.++.+|||+ |||+|..+..++...+ +.+|+++|+++++++.|+++. .+++++.+|+.+. +...++||+|+..
T Consensus 84 ~~~~~vLdi-G~G~G~~~~~l~~~~~--~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~-~~~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDI-GCGEGYYTHAFADALP--EITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRL-PFSDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEE-TCTTSTTHHHHHHTCT--TSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSC-SBCTTCEEEEEEE
T ss_pred CCCCEEEEE-CCCCCHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhC-CCCCCceeEEEEe
Confidence 467899999 9999999999998763 679999999999999999874 4578999998764 3225789999976
Q ss_pred CCcCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 119 CNLENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
.... .++.+.+.|+|||.+++...
T Consensus 156 ~~~~----~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 156 YAPC----KAEELARVVKPGGWVITATP 179 (269)
T ss_dssp SCCC----CHHHHHHHEEEEEEEEEEEE
T ss_pred CChh----hHHHHHHhcCCCcEEEEEEc
Confidence 5433 46778888999998888764
No 230
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.13 E-value=1.3e-10 Score=100.06 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=85.6
Q ss_pred HhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc----C-C-CCcEEEEEcchHHHhhhcc
Q 041509 36 AAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG----L-D-ASHVEFVIGDAQSLLLSHF 109 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~----~-~-~~~V~~~~gda~e~l~~l~ 109 (211)
+...+|++||-| |.|.|..+-.+++.. +..+|+.||+||+.++.|++++. + + ..+++++.+|+.+.+....
T Consensus 79 ~~~p~pk~VLIi-GgGdG~~~revlk~~--~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~ 155 (294)
T 3o4f_A 79 LAHGHAKHVLII-GGGDGAMLREVTRHK--NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTS 155 (294)
T ss_dssp HHSSCCCEEEEE-SCTTSHHHHHHHTCT--TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSS
T ss_pred hhCCCCCeEEEE-CCCchHHHHHHHHcC--CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhcc
Confidence 344679999999 999998877776542 35799999999999999999984 2 2 5789999999999987667
Q ss_pred CCccEEEEcCCcC------cH-HHHHHHHHhcCCCCcEEEE
Q 041509 110 READFVLIDCNLE------NH-EGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 110 ~~fD~VfiD~~~~------~y-~~~l~~~~~~L~pgG~viv 143 (211)
++||+|++|...+ .| .++++.+.+.|+|+|.+++
T Consensus 156 ~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp CCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEE
T ss_pred ccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEE
Confidence 8999999997432 22 6899999999999776554
No 231
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.13 E-value=3.7e-10 Score=97.24 Aligned_cols=95 Identities=18% Similarity=0.089 Sum_probs=77.2
Q ss_pred CCc-CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEE
Q 041509 20 GQK-AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVI 98 (211)
Q Consensus 20 ~~~-~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~ 98 (211)
+|. .+++...+.+...+...+.++|||| |||+|+.|..|++. +++|++||+|+++++.|++++.. .+++++++
T Consensus 29 GQnfL~d~~i~~~Iv~~l~~~~~~~VLEI-G~G~G~lT~~La~~----~~~V~aVEid~~li~~a~~~~~~-~~~v~vi~ 102 (295)
T 3gru_A 29 GQCFLIDKNFVNKAVESANLTKDDVVLEI-GLGKGILTEELAKN----AKKVYVIEIDKSLEPYANKLKEL-YNNIEIIW 102 (295)
T ss_dssp -CCEECCHHHHHHHHHHTTCCTTCEEEEE-CCTTSHHHHHHHHH----SSEEEEEESCGGGHHHHHHHHHH-CSSEEEEE
T ss_pred CccccCCHHHHHHHHHhcCCCCcCEEEEE-CCCchHHHHHHHhc----CCEEEEEECCHHHHHHHHHHhcc-CCCeEEEE
Confidence 443 4677777777777777788899999 99999999999986 57999999999999999999873 35799999
Q ss_pred cchHHHhhhccCCccEEEEcCCc
Q 041509 99 GDAQSLLLSHFREADFVLIDCNL 121 (211)
Q Consensus 99 gda~e~l~~l~~~fD~VfiD~~~ 121 (211)
||+.+.-.. ..+||.|+.+.+-
T Consensus 103 gD~l~~~~~-~~~fD~Iv~NlPy 124 (295)
T 3gru_A 103 GDALKVDLN-KLDFNKVVANLPY 124 (295)
T ss_dssp SCTTTSCGG-GSCCSEEEEECCG
T ss_pred CchhhCCcc-cCCccEEEEeCcc
Confidence 999875321 4579999977653
No 232
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.11 E-value=1.4e-10 Score=99.79 Aligned_cols=97 Identities=11% Similarity=-0.005 Sum_probs=72.2
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEE-EcchHHHhh-hcc-CCccEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFV-IGDAQSLLL-SHF-READFVL 116 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~-~gda~e~l~-~l~-~~fD~Vf 116 (211)
++++|||+ |||||++|.+|++. ..++|++||++++|++.+.++ ..++... ..++...-. .+. .+||+|+
T Consensus 85 ~g~~vLDi-GcGTG~~t~~L~~~---ga~~V~aVDvs~~mL~~a~r~----~~rv~~~~~~ni~~l~~~~l~~~~fD~v~ 156 (291)
T 3hp7_A 85 EDMITIDI-GASTGGFTDVMLQN---GAKLVYAVDVGTNQLVWKLRQ----DDRVRSMEQYNFRYAEPVDFTEGLPSFAS 156 (291)
T ss_dssp TTCEEEEE-TCTTSHHHHHHHHT---TCSEEEEECSSSSCSCHHHHT----CTTEEEECSCCGGGCCGGGCTTCCCSEEE
T ss_pred cccEEEec-CCCccHHHHHHHhC---CCCEEEEEECCHHHHHHHHHh----CcccceecccCceecchhhCCCCCCCEEE
Confidence 46799999 99999999998864 257999999999999886543 1233332 223332211 122 3499999
Q ss_pred EcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 117 IDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 117 iD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+|.........+.++.++|+|||.+++.
T Consensus 157 ~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 157 IDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp ECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred EEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 9988777788999999999999998876
No 233
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.10 E-value=2.3e-10 Score=99.77 Aligned_cols=118 Identities=10% Similarity=-0.035 Sum_probs=89.6
Q ss_pred CCChhHHHHHHHHHh----hCCCCeEEEEccccHHHHHHHHHHHccCC---CcEEEEEeCChhHHHHHHHHhc--CCCCc
Q 041509 23 AKEPNEAEFISALAA----GNNAQLMVVACANVANATTLALAAAAHQT---GGRVVCILRRVEEYKLSKKILG--LDASH 93 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~----~~~~~~VLEi~Gtg~G~stl~la~a~~~~---~g~v~tiE~~~~~~~~Ar~~~~--~~~~~ 93 (211)
..++....++..++. ..++.+|||+ |||+|..++.++..++.. ..+++++|+++.+++.|+.|+. +. +
T Consensus 109 ~TP~~i~~~~~~ll~~l~~~~~~~~VlDp-~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~ 185 (344)
T 2f8l_A 109 MTPDSIGFIVAYLLEKVIQKKKNVSILDP-ACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--K 185 (344)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCSEEEEEET-TCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--C
T ss_pred CChHHHHHHHHHHHHHhcCCCCCCEEEeC-CCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--C
Confidence 344455566555542 3355789999 899999999999887531 2789999999999999999987 54 6
Q ss_pred EEEEEcchHHHhhhccCCccEEEEcCCcCc--------------------H-HHHHHHHHhcCCCCcEEEEEe
Q 041509 94 VEFVIGDAQSLLLSHFREADFVLIDCNLEN--------------------H-EGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 94 V~~~~gda~e~l~~l~~~fD~VfiD~~~~~--------------------y-~~~l~~~~~~L~pgG~viv~d 145 (211)
++++++|+.+..+ .++||+|+.+.+... + ..+++.+.+.|+|||.+++..
T Consensus 186 ~~i~~~D~l~~~~--~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 186 MTLLHQDGLANLL--VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CEEEESCTTSCCC--CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEECCCCCccc--cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999999876432 578999999976211 1 358999999999998876654
No 234
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.10 E-value=2.5e-10 Score=98.08 Aligned_cols=95 Identities=19% Similarity=0.133 Sum_probs=72.5
Q ss_pred CCcC-CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEE
Q 041509 20 GQKA-KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFV 97 (211)
Q Consensus 20 ~~~~-~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~ 97 (211)
++.. .++...+.+...+...++++|||+ |||+|..|..|+.. +++|++||+++.+++.|++++. ...++++++
T Consensus 21 Gq~fl~~~~i~~~i~~~~~~~~~~~VLDi-G~G~G~lt~~La~~----~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~ 95 (299)
T 2h1r_A 21 GQHLLKNPGILDKIIYAAKIKSSDIVLEI-GCGTGNLTVKLLPL----AKKVITIDIDSRMISEVKKRCLYEGYNNLEVY 95 (299)
T ss_dssp --CEECCHHHHHHHHHHHCCCTTCEEEEE-CCTTSTTHHHHTTT----SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC-
T ss_pred ccceecCHHHHHHHHHhcCCCCcCEEEEE-cCcCcHHHHHHHhc----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEE
Confidence 4544 577777777777777788899999 99999999998864 5799999999999999999986 223689999
Q ss_pred EcchHHHhhhccCCccEEEEcCCcC
Q 041509 98 IGDAQSLLLSHFREADFVLIDCNLE 122 (211)
Q Consensus 98 ~gda~e~l~~l~~~fD~VfiD~~~~ 122 (211)
++|+.+.. .++||.|+.|....
T Consensus 96 ~~D~~~~~---~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 96 EGDAIKTV---FPKFDVCTANIPYK 117 (299)
T ss_dssp ---CCSSC---CCCCSEEEEECCGG
T ss_pred ECchhhCC---cccCCEEEEcCCcc
Confidence 99998652 35899999987644
No 235
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.10 E-value=1.8e-10 Score=92.85 Aligned_cols=96 Identities=21% Similarity=0.203 Sum_probs=77.3
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH-hhhccCCccEEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL-LLSHFREADFVLI 117 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~-l~~l~~~fD~Vfi 117 (211)
.++.+|||+ |||+|..+..++.. +.+++++|+++++++.|++++. +++.+|+.+. ++...++||+|++
T Consensus 31 ~~~~~vLdi-G~G~G~~~~~l~~~----~~~~~~~D~~~~~~~~~~~~~~------~~~~~d~~~~~~~~~~~~fD~v~~ 99 (230)
T 3cc8_A 31 KEWKEVLDI-GCSSGALGAAIKEN----GTRVSGIEAFPEAAEQAKEKLD------HVVLGDIETMDMPYEEEQFDCVIF 99 (230)
T ss_dssp TTCSEEEEE-TCTTSHHHHHHHTT----TCEEEEEESSHHHHHHHHTTSS------EEEESCTTTCCCCSCTTCEEEEEE
T ss_pred cCCCcEEEe-CCCCCHHHHHHHhc----CCeEEEEeCCHHHHHHHHHhCC------cEEEcchhhcCCCCCCCccCEEEE
Confidence 467899999 99999999998864 4799999999999999987642 6888998764 2212478999998
Q ss_pred cCCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 118 DCNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 118 D~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
.... .+....++.+.+.|+|||.+++..
T Consensus 100 ~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 100 GDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp ESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred CChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 7543 356789999999999988887754
No 236
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.10 E-value=2.8e-10 Score=99.13 Aligned_cols=102 Identities=17% Similarity=0.075 Sum_probs=79.5
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
.+..+|||+ |||+|..+..+++..+ +.+++.+|. +++.. +++.+ +..++|+++.+|+.+.+ . +||+|+
T Consensus 183 ~~~~~vLDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~---p-~~D~v~ 252 (348)
T 3lst_A 183 PATGTVADV-GGGRGGFLLTVLREHP--GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREV---P-HADVHV 252 (348)
T ss_dssp CSSEEEEEE-TCTTSHHHHHHHHHCT--TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCC---C-CCSEEE
T ss_pred cCCceEEEE-CCccCHHHHHHHHHCC--CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCC---C-CCcEEE
Confidence 456789999 9999999999999874 578999999 45544 44444 55678999999997433 3 899999
Q ss_pred EcCCcC-----cHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 117 IDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 117 iD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
+-.-.. +....++.+.+.|+|||.+++.|.....
T Consensus 253 ~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 253 LKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred EehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 865322 2368999999999999999998876543
No 237
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.08 E-value=1.7e-10 Score=93.64 Aligned_cols=99 Identities=17% Similarity=0.126 Sum_probs=77.8
Q ss_pred HHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccC
Q 041509 31 FISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFR 110 (211)
Q Consensus 31 lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~ 110 (211)
.+..+....++.+|||+ |||+|..+..++. . +++|+++++++.|+++ +++++.+|+.+. +...+
T Consensus 38 ~~~~l~~~~~~~~vLDi-G~G~G~~~~~l~~-----~---~~vD~s~~~~~~a~~~------~~~~~~~d~~~~-~~~~~ 101 (219)
T 1vlm_A 38 ELQAVKCLLPEGRGVEI-GVGTGRFAVPLKI-----K---IGVEPSERMAEIARKR------GVFVLKGTAENL-PLKDE 101 (219)
T ss_dssp HHHHHHHHCCSSCEEEE-TCTTSTTHHHHTC-----C---EEEESCHHHHHHHHHT------TCEEEECBTTBC-CSCTT
T ss_pred HHHHHHHhCCCCcEEEe-CCCCCHHHHHHHH-----H---hccCCCHHHHHHHHhc------CCEEEEcccccC-CCCCC
Confidence 33344444557899999 9999998887753 1 9999999999999986 588999998764 32256
Q ss_pred CccEEEEcCCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 111 EADFVLIDCNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 111 ~fD~VfiD~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+||+|++.... .+....++.+.+.|+|||.+++.+
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 102 SFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp CEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 89999987643 356889999999999998888765
No 238
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.08 E-value=4.7e-10 Score=89.31 Aligned_cols=94 Identities=11% Similarity=0.161 Sum_probs=69.8
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHh-------------
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLL------------- 105 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l------------- 105 (211)
.+..+|||+ |||+|..+..++...++.+++|+++|+++.. ...+++++.+|+.+..
T Consensus 21 ~~~~~vLDl-GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~ 89 (201)
T 2plw_A 21 KKNKIILDI-GCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PIPNVYFIQGEIGKDNMNNIKNINYIDNM 89 (201)
T ss_dssp CTTEEEEEE-SCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CCTTCEEEECCTTTTSSCCC---------
T ss_pred CCCCEEEEe-CCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CCCCceEEEccccchhhhhhccccccccc
Confidence 456789999 9999999999998864225899999999831 1246899999987642
Q ss_pred ----------hhc-cCCccEEEEcCCcCc-------H-------HHHHHHHHhcCCCCcEEEE
Q 041509 106 ----------LSH-FREADFVLIDCNLEN-------H-------EGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 106 ----------~~l-~~~fD~VfiD~~~~~-------y-------~~~l~~~~~~L~pgG~viv 143 (211)
..+ .++||+|+.|..... . ...++.+.+.|+|||.+++
T Consensus 90 ~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 90 NNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp --CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 002 468999999864321 1 2367788899999888776
No 239
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.07 E-value=5.8e-10 Score=94.06 Aligned_cols=95 Identities=13% Similarity=0.034 Sum_probs=75.0
Q ss_pred cCCc-CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEE
Q 041509 19 MGQK-AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFV 97 (211)
Q Consensus 19 ~~~~-~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~ 97 (211)
.+|. .+++...+.+...+...+..+|||| |||+|+.|..|++. +++|++||+|+++++.+++++.. .++++++
T Consensus 7 ~GQnFL~d~~i~~~iv~~~~~~~~~~VLEI-G~G~G~lt~~La~~----~~~V~avEid~~~~~~~~~~~~~-~~~v~~i 80 (255)
T 3tqs_A 7 FGQHFLHDSFVLQKIVSAIHPQKTDTLVEI-GPGRGALTDYLLTE----CDNLALVEIDRDLVAFLQKKYNQ-QKNITIY 80 (255)
T ss_dssp --CCEECCHHHHHHHHHHHCCCTTCEEEEE-CCTTTTTHHHHTTT----SSEEEEEECCHHHHHHHHHHHTT-CTTEEEE
T ss_pred CCcccccCHHHHHHHHHhcCCCCcCEEEEE-cccccHHHHHHHHh----CCEEEEEECCHHHHHHHHHHHhh-CCCcEEE
Confidence 3554 3567788877777777788999999 99999999999864 47999999999999999999874 4689999
Q ss_pred EcchHHH-hhhc--cCCccEEEEcCC
Q 041509 98 IGDAQSL-LLSH--FREADFVLIDCN 120 (211)
Q Consensus 98 ~gda~e~-l~~l--~~~fD~VfiD~~ 120 (211)
+||+.+. ++.+ .++|| |+.+.+
T Consensus 81 ~~D~~~~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 81 QNDALQFDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp ESCTTTCCGGGSCCSSCEE-EEEECC
T ss_pred EcchHhCCHHHhccCCCeE-EEecCC
Confidence 9999886 3333 35788 665544
No 240
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.06 E-value=1.5e-10 Score=97.91 Aligned_cols=87 Identities=16% Similarity=0.091 Sum_probs=70.3
Q ss_pred HHHHHHHhhCCC--CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc---------C-CCCcEEEE
Q 041509 30 EFISALAAGNNA--QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG---------L-DASHVEFV 97 (211)
Q Consensus 30 ~lL~~l~~~~~~--~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~---------~-~~~~V~~~ 97 (211)
+.+...+...++ .+|||+ |||+|..|+++|.. +++|++||.++.+++.++++++ + ..++++++
T Consensus 76 e~l~~al~l~~g~~~~VLDl-~~G~G~dal~lA~~----g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDA-TAGLGRDAFVLASV----GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEET-TCTTCHHHHHHHHH----TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred HHHHHHhcccCCCCCEEEEc-CCcCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 445555555556 799999 89999999999986 5689999999998888887765 1 22579999
Q ss_pred EcchHHHhhhccCCccEEEEcCCc
Q 041509 98 IGDAQSLLLSHFREADFVLIDCNL 121 (211)
Q Consensus 98 ~gda~e~l~~l~~~fD~VfiD~~~ 121 (211)
++|+.+.++.+.++||+||+|...
T Consensus 151 ~~D~~~~L~~~~~~fDvV~lDP~y 174 (258)
T 2oyr_A 151 HASSLTALTDITPRPQVVYLDPMF 174 (258)
T ss_dssp ESCHHHHSTTCSSCCSEEEECCCC
T ss_pred ECCHHHHHHhCcccCCEEEEcCCC
Confidence 999999987666689999999743
No 241
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.05 E-value=1e-09 Score=94.70 Aligned_cols=85 Identities=12% Similarity=0.106 Sum_probs=69.9
Q ss_pred HHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc---c-C
Q 041509 35 LAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH---F-R 110 (211)
Q Consensus 35 l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l---~-~ 110 (211)
.+...++.+|||+ |||+|..|+++++.++ +++|++||.|+++++.|+++++...++++++++|+.++...+ . +
T Consensus 21 ~L~~~~g~~vLD~-g~G~G~~s~~la~~~~--~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~ 97 (301)
T 1m6y_A 21 FLKPEDEKIILDC-TVGEGGHSRAILEHCP--GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIE 97 (301)
T ss_dssp HHCCCTTCEEEET-TCTTSHHHHHHHHHCT--TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCS
T ss_pred hcCCCCCCEEEEE-eCCcCHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCC
Confidence 3355677899999 8999999999999874 689999999999999999999822278999999988753212 1 5
Q ss_pred CccEEEEcCCcC
Q 041509 111 EADFVLIDCNLE 122 (211)
Q Consensus 111 ~fD~VfiD~~~~ 122 (211)
+||.|++|....
T Consensus 98 ~~D~Vl~D~gvS 109 (301)
T 1m6y_A 98 KVDGILMDLGVS 109 (301)
T ss_dssp CEEEEEEECSCC
T ss_pred CCCEEEEcCccc
Confidence 899999998765
No 242
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.05 E-value=1.4e-09 Score=95.23 Aligned_cols=105 Identities=18% Similarity=0.169 Sum_probs=84.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
.+.++|||| |||+|..++.++++.| +.+++..|. |++++.|++++. ...++|+++.||..+- ....+|++++
T Consensus 178 ~~~~~v~Dv-GgG~G~~~~~l~~~~p--~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~---~~~~~D~~~~ 250 (353)
T 4a6d_A 178 SVFPLMCDL-GGGAGALAKECMSLYP--GCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD---PLPEADLYIL 250 (353)
T ss_dssp GGCSEEEEE-TCTTSHHHHHHHHHCS--SCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS---CCCCCSEEEE
T ss_pred ccCCeEEee-CCCCCHHHHHHHHhCC--CceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccC---CCCCceEEEe
Confidence 456789999 9999999999999875 578888887 889999999988 5578999999998653 2356899998
Q ss_pred cCCc-----CcHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 118 DCNL-----ENHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 118 D~~~-----~~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
-.-. ++-...++.+.+.|+|||.++|.|.++.+
T Consensus 251 ~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 251 ARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred eeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 5432 23367899999999999999999987754
No 243
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.05 E-value=4.3e-10 Score=90.49 Aligned_cols=91 Identities=14% Similarity=0.117 Sum_probs=68.7
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHh-----hh-cc--
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLL-----LS-HF-- 109 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l-----~~-l~-- 109 (211)
..++.+|||+ |||+|..|..+++. +++|++||++|.. ...+++++.+|+.+.. .. +.
T Consensus 23 ~~~g~~VLDl-G~G~G~~s~~la~~----~~~V~gvD~~~~~----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 23 VRKGDAVIEI-GSSPGGWTQVLNSL----ARKIISIDLQEME----------EIAGVRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp SCTTCEEEEE-SCTTCHHHHHHTTT----CSEEEEEESSCCC----------CCTTCEEEECCTTSSSHHHHHHHHHHHH
T ss_pred CCCCCEEEEE-eecCCHHHHHHHHc----CCcEEEEeccccc----------cCCCeEEEEccccCHHHHHHHHHHhhcc
Confidence 3567899999 89999999988864 6899999999852 1357999999986531 11 12
Q ss_pred --CCccEEEEcCCcC-------c-------HHHHHHHHHhcCCCCcEEEE
Q 041509 110 --READFVLIDCNLE-------N-------HEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 110 --~~fD~VfiD~~~~-------~-------y~~~l~~~~~~L~pgG~viv 143 (211)
++||+|+.|+... + ....++.+.++|+|||.+++
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~ 137 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLL 137 (191)
T ss_dssp TCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 5999999997432 1 24567788889999988876
No 244
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.04 E-value=2.2e-10 Score=102.81 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=64.9
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-C--CCCcEEEEEcchHHHhhhc-cCCccEEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-L--DASHVEFVIGDAQSLLLSH-FREADFVL 116 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~--~~~~V~~~~gda~e~l~~l-~~~fD~Vf 116 (211)
+++|||+ |||+|+.+++|+.. +++|++||+|+++++.|++|++ . ..++++++++|+.+.++.. .++||+||
T Consensus 94 g~~VLDL-gcG~G~~al~LA~~----g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 94 GTKVVDL-TGGLGIDFIALMSK----ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp TCEEEES-SCSSSHHHHHHHTT----CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCEEEEe-CCCchHHHHHHHhc----CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEE
Confidence 6899999 89999999998864 5799999999999999999998 2 2378999999999877643 46899999
Q ss_pred EcCC
Q 041509 117 IDCN 120 (211)
Q Consensus 117 iD~~ 120 (211)
+|.+
T Consensus 169 lDPP 172 (410)
T 3ll7_A 169 VDPA 172 (410)
T ss_dssp ECCE
T ss_pred ECCC
Confidence 9964
No 245
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.03 E-value=2.4e-09 Score=89.25 Aligned_cols=95 Identities=12% Similarity=-0.004 Sum_probs=71.2
Q ss_pred CCc-CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEE
Q 041509 20 GQK-AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVI 98 (211)
Q Consensus 20 ~~~-~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~ 98 (211)
++. .+++...+.+...+...+..+|||+ |||+|..|..++.. +++|++||+|+++++.|++++.. .+++++++
T Consensus 9 gQ~fl~d~~~~~~i~~~~~~~~~~~VLDi-G~G~G~lt~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~-~~~v~~~~ 82 (244)
T 1qam_A 9 SQNFITSKHNIDKIMTNIRLNEHDNIFEI-GSGKGHFTLELVQR----CNFVTAIEIDHKLCKTTENKLVD-HDNFQVLN 82 (244)
T ss_dssp -CCBCCCHHHHHHHHTTCCCCTTCEEEEE-CCTTSHHHHHHHHH----SSEEEEECSCHHHHHHHHHHTTT-CCSEEEEC
T ss_pred CccccCCHHHHHHHHHhCCCCCCCEEEEE-eCCchHHHHHHHHc----CCeEEEEECCHHHHHHHHHhhcc-CCCeEEEE
Confidence 443 3566666666666666677899999 99999999999976 47999999999999999999874 26899999
Q ss_pred cchHHHhhhccCCccEEEEcCCc
Q 041509 99 GDAQSLLLSHFREADFVLIDCNL 121 (211)
Q Consensus 99 gda~e~l~~l~~~fD~VfiD~~~ 121 (211)
+|+.+........| .|+.+.+-
T Consensus 83 ~D~~~~~~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 83 KDILQFKFPKNQSY-KIFGNIPY 104 (244)
T ss_dssp CCGGGCCCCSSCCC-EEEEECCG
T ss_pred ChHHhCCcccCCCe-EEEEeCCc
Confidence 99987632112344 46655543
No 246
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.03 E-value=2.1e-09 Score=91.70 Aligned_cols=110 Identities=13% Similarity=0.080 Sum_probs=78.8
Q ss_pred HHHhhCCCCeEEEEccccH--HHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC-CCCcEEEEEcchHHHh---h-
Q 041509 34 ALAAGNNAQLMVVACANVA--NATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL-DASHVEFVIGDAQSLL---L- 106 (211)
Q Consensus 34 ~l~~~~~~~~VLEi~Gtg~--G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~-~~~~V~~~~gda~e~l---~- 106 (211)
.++.....+.|||| |||+ +-.+..+++...+ +.+|+.||.||.|++.||+.+.. ...+++|+.+|+.+.- .
T Consensus 72 ~l~~~~g~~q~LDL-GcG~pT~~~~~~la~~~~P-~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~ 149 (277)
T 3giw_A 72 HLAKEAGIRQFLDI-GTGIPTSPNLHEIAQSVAP-ESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDA 149 (277)
T ss_dssp HHHHTSCCCEEEEE-SCCSCCSSCHHHHHHHHCT-TCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTC
T ss_pred HhccccCCCEEEEe-CCCCCcccHHHHHHHHHCC-CCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcc
Confidence 33333466899999 9997 3344556655433 78999999999999999999873 2468999999997752 1
Q ss_pred -hccCCcc-----EEEEcCCc---Cc---HHHHHHHHHhcCCCCcEEEEEe
Q 041509 107 -SHFREAD-----FVLIDCNL---EN---HEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 107 -~l~~~fD-----~VfiD~~~---~~---y~~~l~~~~~~L~pgG~viv~d 145 (211)
...+.|| .|++.+-. .+ ....++.+.+.|+|||.+++.+
T Consensus 150 ~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 150 PELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp HHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 1134565 36665432 12 3579999999999999888865
No 247
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.03 E-value=2e-10 Score=102.10 Aligned_cols=100 Identities=14% Similarity=0.060 Sum_probs=74.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
.+..+|||+ |||+|..+..++.. +.+|+++|+++++++.|+++ +......+...+..+.++..+++||+|+..
T Consensus 106 ~~~~~VLDi-GcG~G~~~~~l~~~----g~~v~gvD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~ 178 (416)
T 4e2x_A 106 GPDPFIVEI-GCNDGIMLRTIQEA----GVRHLGFEPSSGVAAKAREK--GIRVRTDFFEKATADDVRRTEGPANVIYAA 178 (416)
T ss_dssp SSSCEEEEE-TCTTTTTHHHHHHT----TCEEEEECCCHHHHHHHHTT--TCCEECSCCSHHHHHHHHHHHCCEEEEEEE
T ss_pred CCCCEEEEe-cCCCCHHHHHHHHc----CCcEEEECCCHHHHHHHHHc--CCCcceeeechhhHhhcccCCCCEEEEEEC
Confidence 456799999 99999999988864 56999999999999999976 222112222223333334336899999987
Q ss_pred CCc---CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 119 CNL---ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 119 ~~~---~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
... .+....++.+.++|+|||.+++..
T Consensus 179 ~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 179 NTLCHIPYVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp SCGGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHHhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 643 367899999999999988877753
No 248
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.03 E-value=3.2e-09 Score=90.28 Aligned_cols=106 Identities=18% Similarity=0.136 Sum_probs=81.0
Q ss_pred HHHHHHHHHhh------cCCc-CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHH
Q 041509 8 NATKAYLKTLK------MGQK-AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEY 80 (211)
Q Consensus 8 ~~~~ay~~~~~------~~~~-~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~ 80 (211)
..+.+.++... .+|. .+++...+.+...+...+. +|||| |||+|..|..|+.. +++|++||+|++++
T Consensus 8 ~~~~~~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEI-G~G~G~lt~~L~~~----~~~V~avEid~~~~ 81 (271)
T 3fut_A 8 QSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEV-GPGLGALTRALLEA----GAEVTAIEKDLRLR 81 (271)
T ss_dssp HHHHHHHHHTTCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEE-CCTTSHHHHHHHHT----TCCEEEEESCGGGH
T ss_pred HHHHHHHHhcCCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEE-eCchHHHHHHHHHc----CCEEEEEECCHHHH
Confidence 44556666533 2444 3677788777777777777 99999 99999999999975 47899999999999
Q ss_pred HHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCCc
Q 041509 81 KLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCNL 121 (211)
Q Consensus 81 ~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~ 121 (211)
+.+++++.. .++++++||+.+.-......+|.|+.+.+-
T Consensus 82 ~~l~~~~~~--~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy 120 (271)
T 3fut_A 82 PVLEETLSG--LPVRLVFQDALLYPWEEVPQGSLLVANLPY 120 (271)
T ss_dssp HHHHHHTTT--SSEEEEESCGGGSCGGGSCTTEEEEEEECS
T ss_pred HHHHHhcCC--CCEEEEECChhhCChhhccCccEEEecCcc
Confidence 999999873 689999999987632112368999876543
No 249
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.02 E-value=1.2e-09 Score=97.46 Aligned_cols=119 Identities=10% Similarity=-0.045 Sum_probs=86.3
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccC------------------------------------CC
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQ------------------------------------TG 67 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~------------------------------------~~ 67 (211)
+.+..+..|..++...+...|||. +||+|...+.+|..... ..
T Consensus 185 l~e~lAa~ll~l~~~~~~~~vlDp-~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 263 (393)
T 3k0b_A 185 IKETMAAALVLLTSWHPDRPFYDP-VCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQP 263 (393)
T ss_dssp CCHHHHHHHHHHSCCCTTSCEEET-TCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEc-CCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCC
Confidence 455556666666665667789999 89999998888765431 12
Q ss_pred cEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEEEcCCcC-------cHHHHHHHHHhcCC--
Q 041509 68 GRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVLIDCNLE-------NHEGVLRAVQAGNK-- 136 (211)
Q Consensus 68 g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~-------~y~~~l~~~~~~L~-- 136 (211)
.+|+++|+|+++++.|++|+. ++.++|+++++|+.+... .++||+|+.|.+-. ...+.++.+.+.|+
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~ 341 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT--EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRM 341 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC--CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC--CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcC
Confidence 579999999999999999998 667789999999998643 46899999997632 22333443333332
Q ss_pred CCcEEEEEe
Q 041509 137 PNGAVVVGY 145 (211)
Q Consensus 137 pgG~viv~d 145 (211)
+||.+++..
T Consensus 342 ~g~~~~iit 350 (393)
T 3k0b_A 342 PTWSVYVLT 350 (393)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEE
Confidence 477776654
No 250
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.01 E-value=3.3e-09 Score=89.65 Aligned_cols=133 Identities=17% Similarity=0.093 Sum_probs=94.0
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHcc-----CCCcEEEEEe-----CChh----------------------HHHH---H
Q 041509 39 NNAQLMVVACANVANATTLALAAAAH-----QTGGRVVCIL-----RRVE----------------------EYKL---S 83 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~-----~~~g~v~tiE-----~~~~----------------------~~~~---A 83 (211)
.-|..|+|+ |+.-|.|++.++.... ....+|+++| ..+. .++. .
T Consensus 68 ~vpG~ivE~-GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~ 146 (257)
T 3tos_A 68 DVPGVIMEF-GVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDA 146 (257)
T ss_dssp TSCSEEEEE-CCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHH
T ss_pred CCCCeEEEE-ecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHH
Confidence 447789999 9999999998775321 2368999999 3321 1111 2
Q ss_pred HHHhc--CC-CCcEEEEEcchHHHhhhc-----cCCccEEEEcCCc-CcHHHHHHHHHhcCCCCcEEEEEecCC---CCC
Q 041509 84 KKILG--LD-ASHVEFVIGDAQSLLLSH-----FREADFVLIDCNL-ENHEGVLRAVQAGNKPNGAVVVGYNAF---RKG 151 (211)
Q Consensus 84 r~~~~--~~-~~~V~~~~gda~e~l~~l-----~~~fD~VfiD~~~-~~y~~~l~~~~~~L~pgG~viv~dn~~---~~~ 151 (211)
+++++ +. .++|+++.|++.+.|+.+ .++|||||+|+++ ..+.++++.+.++|+| |+++++||.. ++|
T Consensus 147 ~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~-GGvIv~DD~~~~~w~G 225 (257)
T 3tos_A 147 HECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTK-GSIVAFDELDNPKWPG 225 (257)
T ss_dssp HHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEE-EEEEEESSTTCTTCTH
T ss_pred HhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCC-CcEEEEcCCCCCCChH
Confidence 23333 43 489999999999999864 3479999999997 3567789999999998 5577779964 233
Q ss_pred ---cee----cCCCcEEEeecCCcEEEEE
Q 041509 152 ---SWR----SSGSKSQLLPIGEGLLVTR 173 (211)
Q Consensus 152 ---~~~----~~~~~~v~lpig~Gl~v~~ 173 (211)
.|. +.+.....+|...+....+
T Consensus 226 ~~~A~~ef~~~~~~~i~~~p~~~~~~y~~ 254 (257)
T 3tos_A 226 ENIAMRKVLGLDHAPLRLLPGRPAPAYLR 254 (257)
T ss_dssp HHHHHHHHTCTTSSCCEECTTCSCCEEEE
T ss_pred HHHHHHHHHhhCCCeEEEccCCCCCEEEE
Confidence 222 4556677788877766544
No 251
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.00 E-value=1.2e-09 Score=97.25 Aligned_cols=119 Identities=11% Similarity=0.033 Sum_probs=85.5
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccC------------------------------------CC
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQ------------------------------------TG 67 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~------------------------------------~~ 67 (211)
+.+..+..|..++...+...|||. +||+|..++.+|..... ..
T Consensus 179 l~e~lAa~ll~~~~~~~~~~vlDp-~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 257 (385)
T 3ldu_A 179 IRETLAAGLIYLTPWKAGRVLVDP-MCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESK 257 (385)
T ss_dssp CCHHHHHHHHHTSCCCTTSCEEET-TCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCC
T ss_pred CcHHHHHHHHHhhCCCCCCeEEEc-CCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCC
Confidence 344455555555555567789999 89999999988776421 12
Q ss_pred cEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEEEcCCcC-------cHHHHHHHHHhcCC--
Q 041509 68 GRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVLIDCNLE-------NHEGVLRAVQAGNK-- 136 (211)
Q Consensus 68 g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~-------~y~~~l~~~~~~L~-- 136 (211)
.+|+++|+|+++++.|++|+. ++.++|+|.++|+.+... .++||+|+.|.+-. ...+.++.+.+.|+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS--EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC--SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc--CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 689999999999999999998 667789999999998643 46899999998742 22334444433333
Q ss_pred CCcEEEEEe
Q 041509 137 PNGAVVVGY 145 (211)
Q Consensus 137 pgG~viv~d 145 (211)
+|+.+++..
T Consensus 336 ~g~~~~iit 344 (385)
T 3ldu_A 336 KNWSYYLIT 344 (385)
T ss_dssp BSCEEEEEE
T ss_pred CCCEEEEEE
Confidence 367766644
No 252
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.00 E-value=8.2e-10 Score=91.64 Aligned_cols=106 Identities=10% Similarity=0.033 Sum_probs=72.4
Q ss_pred HHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEc-chHHHh-hhc
Q 041509 31 FISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIG-DAQSLL-LSH 108 (211)
Q Consensus 31 lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~g-da~e~l-~~l 108 (211)
.|..+....++++|||| |||+|..|.+|++. ...+|++||++++|++.|+++.. ++..... +..... ..+
T Consensus 28 ~L~~~~~~~~g~~VLDi-GcGtG~~t~~la~~---g~~~V~gvDis~~ml~~a~~~~~----~~~~~~~~~~~~~~~~~~ 99 (232)
T 3opn_A 28 ALKEFHLEINGKTCLDI-GSSTGGFTDVMLQN---GAKLVYALDVGTNQLAWKIRSDE----RVVVMEQFNFRNAVLADF 99 (232)
T ss_dssp HHHHTTCCCTTCEEEEE-TCTTSHHHHHHHHT---TCSEEEEECSSCCCCCHHHHTCT----TEEEECSCCGGGCCGGGC
T ss_pred HHHHcCCCCCCCEEEEE-ccCCCHHHHHHHhc---CCCEEEEEcCCHHHHHHHHHhCc----cccccccceEEEeCHhHc
Confidence 34433323346799999 99999999999875 13599999999999999887643 2222111 121111 111
Q ss_pred cC-CccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 109 FR-EADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 109 ~~-~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.. .||.+..|.........++.+.+.|+|||.+++.
T Consensus 100 ~~~~~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 100 EQGRPSFTSIDVSFISLDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CSCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CcCCCCEEEEEEEhhhHHHHHHHHHHhccCCCEEEEE
Confidence 22 3677777776666678999999999999988875
No 253
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.98 E-value=1.7e-09 Score=85.57 Aligned_cols=97 Identities=14% Similarity=0.046 Sum_probs=71.0
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCC-------CcEEEEEeCChhHHHHHHHHhcCCCCcEEEE-EcchHHHhh---
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQT-------GGRVVCILRRVEEYKLSKKILGLDASHVEFV-IGDAQSLLL--- 106 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~-------~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~-~gda~e~l~--- 106 (211)
..++.+|||+ |||+|..++.+++..+.. .++|+++|+++.. . ..+++++ .+|+.+...
T Consensus 20 ~~~~~~vLDl-GcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~-~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDC-GAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------P-LEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEE-TCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------C-CTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEe-CCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------c-CCCCeEEEeccCCCHHHHHH
Confidence 3467899999 999999999999986421 1899999999842 1 2468888 888654321
Q ss_pred ---hc-cCCccEEEEcCCcC-------cH-------HHHHHHHHhcCCCCcEEEEEe
Q 041509 107 ---SH-FREADFVLIDCNLE-------NH-------EGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 107 ---~l-~~~fD~VfiD~~~~-------~y-------~~~l~~~~~~L~pgG~viv~d 145 (211)
.+ .++||+|+.|.... +. ...++.+.+.|+|||.+++.+
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 11 35899999976321 11 467888999999999888754
No 254
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.98 E-value=3.3e-09 Score=94.39 Aligned_cols=119 Identities=8% Similarity=-0.111 Sum_probs=87.1
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccC------------------------------------CC
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQ------------------------------------TG 67 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~------------------------------------~~ 67 (211)
+.+..+..|..++.-.+...+||. +||+|...+.+|..... ..
T Consensus 178 l~e~LAaall~l~~~~~~~~llDp-~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~ 256 (384)
T 3ldg_A 178 IKENMAAAIILLSNWFPDKPFVDP-TCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQ 256 (384)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEET-TCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEe-CCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCC
Confidence 445556656566665667789999 89999998887765431 12
Q ss_pred cEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEEEEcCCc-------CcHHHHHHHHHhcCC--
Q 041509 68 GRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFVLIDCNL-------ENHEGVLRAVQAGNK-- 136 (211)
Q Consensus 68 g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~-------~~y~~~l~~~~~~L~-- 136 (211)
.+|+++|+|+++++.|++|++ ++.++|+++.+|+.+... .++||+|+.|.+- ....+.++.+.+.|+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~ 334 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT--NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPL 334 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC--CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc--cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhC
Confidence 579999999999999999998 777789999999998643 4689999999763 223444554444443
Q ss_pred CCcEEEEEe
Q 041509 137 PNGAVVVGY 145 (211)
Q Consensus 137 pgG~viv~d 145 (211)
|||.+++..
T Consensus 335 ~g~~~~iit 343 (384)
T 3ldg_A 335 KTWSQFILT 343 (384)
T ss_dssp TTSEEEEEE
T ss_pred CCcEEEEEE
Confidence 378776654
No 255
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.98 E-value=7.7e-10 Score=98.02 Aligned_cols=114 Identities=18% Similarity=0.122 Sum_probs=86.9
Q ss_pred CCcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEc
Q 041509 20 GQKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIG 99 (211)
Q Consensus 20 ~~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~g 99 (211)
++...++..++++..++...++.+|||+ |||+|..++.+++.... ..+++++|+++++++.| .+++++++
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~-gcGtG~~~~~~~~~~~~-~~~i~gvDi~~~~~~~a--------~~~~~~~~ 88 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEP-ACAHGPFLRAFREAHGT-AYRFVGVEIDPKALDLP--------PWAEGILA 88 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEE-TCTTCHHHHHHHHHHCS-CSEEEEEESCTTTCCCC--------TTEEEEES
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEEC-CCCChHHHHHHHHHhCC-CCeEEEEECCHHHHHhC--------CCCcEEeC
Confidence 4455667778888777765567799999 89999999999887532 57999999999998766 57999999
Q ss_pred chHHHhhhccCCccEEEEcCCc--------------C------------------cHHHHHHHHHhcCCCCcEEEEEe
Q 041509 100 DAQSLLLSHFREADFVLIDCNL--------------E------------------NHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 100 da~e~l~~l~~~fD~VfiD~~~--------------~------------------~y~~~l~~~~~~L~pgG~viv~d 145 (211)
|+.+..+ .++||+|+.+.+- . .|..+++.+.++|+|||.+++..
T Consensus 89 D~~~~~~--~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 89 DFLLWEP--GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp CGGGCCC--SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhcCc--cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9987643 4789999996321 0 12366888899999999876544
No 256
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.93 E-value=2e-09 Score=91.77 Aligned_cols=103 Identities=18% Similarity=0.079 Sum_probs=76.2
Q ss_pred CCCeEEEEccccHHH----HHHHHHHHccCC--CcEEEEEeCChhHHHHHHHHhc------C------------------
Q 041509 40 NAQLMVVACANVANA----TTLALAAAAHQT--GGRVVCILRRVEEYKLSKKILG------L------------------ 89 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~----stl~la~a~~~~--~g~v~tiE~~~~~~~~Ar~~~~------~------------------ 89 (211)
++.+|||+ |||||- .++.|++.++.. +.+|+++|+|+++++.|+++.- +
T Consensus 105 ~~~rIld~-GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~ 183 (274)
T 1af7_A 105 GEYRVWSA-AASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHE 183 (274)
T ss_dssp SCEEEEES-CCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSC
T ss_pred CCcEEEEe-eccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCC
Confidence 45689999 999997 456667665421 3599999999999999999751 0
Q ss_pred --------CCCcEEEEEcchHHH-hhhccCCccEEEEcCC-----cCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 90 --------DASHVEFVIGDAQSL-LLSHFREADFVLIDCN-----LENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 90 --------~~~~V~~~~gda~e~-l~~l~~~fD~VfiD~~-----~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+..+|+|..+|..+. .+ ..++||+||.-.- .+...+.++.+.+.|+|||.+++.
T Consensus 184 ~~~~v~~~lr~~V~F~~~dl~~~~~~-~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 184 GLVRVRQELANYVEFSSVNLLEKQYN-VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp SEEEECHHHHTTEEEEECCTTCSSCC-CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CceeechhhcccCeEEecccCCCCCC-cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 013699999999872 12 1478999998432 223478899999999998877763
No 257
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.92 E-value=2e-09 Score=94.71 Aligned_cols=97 Identities=15% Similarity=0.063 Sum_probs=77.8
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDC 119 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~ 119 (211)
+..+|||| |||+|..+..+++..+ +.+++.+|. |++++.|++ ..+|+++.||..+-++ .. |+|++..
T Consensus 203 ~~~~vlDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~p---~~-D~v~~~~ 269 (368)
T 3reo_A 203 GLTTIVDV-GGGTGAVASMIVAKYP--SINAINFDL-PHVIQDAPA-----FSGVEHLGGDMFDGVP---KG-DAIFIKW 269 (368)
T ss_dssp TCSEEEEE-TCTTSHHHHHHHHHCT--TCEEEEEEC-HHHHTTCCC-----CTTEEEEECCTTTCCC---CC-SEEEEES
T ss_pred CCCEEEEe-CCCcCHHHHHHHHhCC--CCEEEEEeh-HHHHHhhhh-----cCCCEEEecCCCCCCC---CC-CEEEEec
Confidence 46789999 9999999999999874 579999999 888876653 2579999999986333 23 9999865
Q ss_pred CcC-----cHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 120 NLE-----NHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 120 ~~~-----~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
-.. +....++.+.+.|+|||.+++.|....
T Consensus 270 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 270 ICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp CGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 332 335789999999999999999887654
No 258
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.92 E-value=2.8e-09 Score=93.75 Aligned_cols=98 Identities=18% Similarity=0.081 Sum_probs=78.5
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
.+..+|||| |||+|..+..+++..+ +.+++.+|. |++++.|++ ..+|+++.+|+.+-++ .. |+|++-
T Consensus 200 ~~~~~vlDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~D~~~~~p---~~-D~v~~~ 266 (364)
T 3p9c_A 200 EGLGTLVDV-GGGVGATVAAIAAHYP--TIKGVNFDL-PHVISEAPQ-----FPGVTHVGGDMFKEVP---SG-DTILMK 266 (364)
T ss_dssp TTCSEEEEE-TCTTSHHHHHHHHHCT--TCEEEEEEC-HHHHTTCCC-----CTTEEEEECCTTTCCC---CC-SEEEEE
T ss_pred cCCCEEEEe-CCCCCHHHHHHHHHCC--CCeEEEecC-HHHHHhhhh-----cCCeEEEeCCcCCCCC---CC-CEEEeh
Confidence 346899999 9999999999999875 578999999 888776653 2689999999987333 23 999986
Q ss_pred CCc-----CcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 119 CNL-----ENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 119 ~~~-----~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
.-. ++....++.+.+.|+|||.+++.|....
T Consensus 267 ~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 267 WILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred HHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 533 2346789999999999999999887654
No 259
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.92 E-value=8e-10 Score=89.03 Aligned_cols=95 Identities=12% Similarity=0.032 Sum_probs=73.1
Q ss_pred HHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc
Q 041509 29 AEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 29 ~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l 108 (211)
..++..+....++.+|||+ |||+|..+..++ .+++++|+++. +++++.+|+.+. +..
T Consensus 56 ~~~~~~l~~~~~~~~vLDi-G~G~G~~~~~l~-------~~v~~~D~s~~--------------~~~~~~~d~~~~-~~~ 112 (215)
T 2zfu_A 56 DRIARDLRQRPASLVVADF-GCGDCRLASSIR-------NPVHCFDLASL--------------DPRVTVCDMAQV-PLE 112 (215)
T ss_dssp HHHHHHHHTSCTTSCEEEE-TCTTCHHHHHCC-------SCEEEEESSCS--------------STTEEESCTTSC-SCC
T ss_pred HHHHHHHhccCCCCeEEEE-CCcCCHHHHHhh-------ccEEEEeCCCC--------------CceEEEeccccC-CCC
Confidence 3456666555567899999 999999877662 58999999987 466788888763 322
Q ss_pred cCCccEEEEcCC--cCcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 109 FREADFVLIDCN--LENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 109 ~~~fD~VfiD~~--~~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
.++||+|++... ..+....++.+.+.|+|||.+++.+.
T Consensus 113 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 113 DESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp TTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEc
Confidence 578999998654 24678899999999999998888763
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.90 E-value=2.2e-09 Score=96.89 Aligned_cols=120 Identities=10% Similarity=-0.073 Sum_probs=92.6
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccC-----------CCcEEEEEeCChhHHHHHHHHhc--C
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQ-----------TGGRVVCILRRVEEYKLSKKILG--L 89 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~-----------~~g~v~tiE~~~~~~~~Ar~~~~--~ 89 (211)
.-++...+++..++...+..+|+|. |||+|...+.++..+.. ...+++++|+++.+++.|+.|+. +
T Consensus 154 yTP~~v~~~mv~~l~~~~~~~VlDp-acGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g 232 (445)
T 2okc_A 154 FTPRPLIQAMVDCINPQMGETVCDP-ACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG 232 (445)
T ss_dssp CCCHHHHHHHHHHHCCCTTCCEEET-TCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT
T ss_pred cCcHHHHHHHHHHhCCCCCCEEecc-CCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC
Confidence 4556678888888877777899999 79999999888876532 13679999999999999999987 5
Q ss_pred CCC-cEEEEEcchHHHhhhccCCccEEEEcCCcCc--------------------HHHHHHHHHhcCCCCcEEEEEe
Q 041509 90 DAS-HVEFVIGDAQSLLLSHFREADFVLIDCNLEN--------------------HEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 90 ~~~-~V~~~~gda~e~l~~l~~~fD~VfiD~~~~~--------------------y~~~l~~~~~~L~pgG~viv~d 145 (211)
... ++++++||+..... .++||+|+.+.+... ...+++.+.+.|+|||.++++-
T Consensus 233 ~~~~~~~i~~gD~l~~~~--~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 233 IGTDRSPIVCEDSLEKEP--STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp CCSSCCSEEECCTTTSCC--SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCCCCEeeCCCCCCcc--cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 432 68899999986532 358999999854221 2478899999999998875443
No 261
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.87 E-value=1.1e-08 Score=87.27 Aligned_cols=81 Identities=17% Similarity=0.115 Sum_probs=67.2
Q ss_pred CCc-CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEE
Q 041509 20 GQK-AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVI 98 (211)
Q Consensus 20 ~~~-~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~ 98 (211)
++. .+++...+.+...+...+..+|||| |||+|..|..|+......+++|++||+|+++++.|+++. ..++++++
T Consensus 21 GQ~fL~d~~i~~~iv~~~~~~~~~~VLEI-G~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~~~v~~i~ 96 (279)
T 3uzu_A 21 GQNFLVDHGVIDAIVAAIRPERGERMVEI-GPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---GELLELHA 96 (279)
T ss_dssp SCCEECCHHHHHHHHHHHCCCTTCEEEEE-CCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---GGGEEEEE
T ss_pred CccccCCHHHHHHHHHhcCCCCcCEEEEE-ccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---CCCcEEEE
Confidence 454 4677788777777777788899999 999999999999875321366999999999999999984 46899999
Q ss_pred cchHHH
Q 041509 99 GDAQSL 104 (211)
Q Consensus 99 gda~e~ 104 (211)
+|+.+.
T Consensus 97 ~D~~~~ 102 (279)
T 3uzu_A 97 GDALTF 102 (279)
T ss_dssp SCGGGC
T ss_pred CChhcC
Confidence 999886
No 262
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.84 E-value=1.4e-08 Score=89.70 Aligned_cols=122 Identities=18% Similarity=0.113 Sum_probs=96.0
Q ss_pred hHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CC-----CCcEEEEEc
Q 041509 27 NEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LD-----ASHVEFVIG 99 (211)
Q Consensus 27 ~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~-----~~~V~~~~g 99 (211)
....+...+....++.+|||+| ++.|-=|+.||+.. .+++|+++|+++..++..++|++ +. ..+|++...
T Consensus 135 ~aS~l~~~~L~~~pg~~VLD~C-AaPGGKT~~la~~~--~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~ 211 (359)
T 4fzv_A 135 AASLLPVLALGLQPGDIVLDLC-AAPGGKTLALLQTG--CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSW 211 (359)
T ss_dssp GGGHHHHHHHCCCTTEEEEESS-CTTCHHHHHHHHTT--CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECC
T ss_pred HHHHHHHHHhCCCCCCEEEEec-CCccHHHHHHHHhc--CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeC
Confidence 3445666667777888999997 99999999998765 36899999999999999999987 32 357999999
Q ss_pred chHHHhhhccCCccEEEEcCCcC-----------c----------------HHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 100 DAQSLLLSHFREADFVLIDCNLE-----------N----------------HEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 100 da~e~l~~l~~~fD~VfiD~~~~-----------~----------------y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
|+...-....+.||.|++|++=. + ..+.++.+.++|+|||.++-+.+.+.+.
T Consensus 212 D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 212 DGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp CGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred chhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 99887554467999999996410 0 1457778888999999888877777654
No 263
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.83 E-value=1.1e-08 Score=95.12 Aligned_cols=77 Identities=16% Similarity=0.138 Sum_probs=64.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhhc-cCCccEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLSH-FREADFVL 116 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~l-~~~fD~Vf 116 (211)
.+|-+|||| |||.|..+.+||+. +++||+||.++++++.|+.+.. ...-+|+++++++.++.... .++||+|+
T Consensus 65 ~~~~~vLDv-GCG~G~~~~~la~~----ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~ 139 (569)
T 4azs_A 65 GRPLNVLDL-GCAQGFFSLSLASK----GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAI 139 (569)
T ss_dssp TSCCEEEEE-TCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEE
T ss_pred CCCCeEEEE-CCCCcHHHHHHHhC----CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEE
Confidence 467899999 99999999999974 7899999999999999999886 22347999999999986543 56899998
Q ss_pred EcCC
Q 041509 117 IDCN 120 (211)
Q Consensus 117 iD~~ 120 (211)
.-.-
T Consensus 140 ~~e~ 143 (569)
T 4azs_A 140 GLSV 143 (569)
T ss_dssp EESC
T ss_pred ECcc
Confidence 6543
No 264
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.82 E-value=8.4e-09 Score=91.53 Aligned_cols=101 Identities=14% Similarity=0.031 Sum_probs=79.5
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc----C-C----CCcEEEEEcchHHHhhhc-
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG----L-D----ASHVEFVIGDAQSLLLSH- 108 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~----~-~----~~~V~~~~gda~e~l~~l- 108 (211)
.+|++||-| |.|.|..+-.+.+. +..+|+.||+||+.++.|++++. + + .++++++.+|+.+.+.+.
T Consensus 204 ~~pkrVLII-GgGdG~~~revlkh---~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~ 279 (381)
T 3c6k_A 204 YTGKDVLIL-GGGDGGILCEIVKL---KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA 279 (381)
T ss_dssp CTTCEEEEE-ECTTCHHHHHHHTT---CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH
T ss_pred CCCCeEEEE-CCCcHHHHHHHHhc---CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhh
Confidence 467999999 99999877766653 24799999999999999999975 1 1 246999999999998643
Q ss_pred --cCCccEEEEcCCc------------Cc-HHHHHHHHHhcCCCCcEEEE
Q 041509 109 --FREADFVLIDCNL------------EN-HEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 109 --~~~fD~VfiD~~~------------~~-y~~~l~~~~~~L~pgG~viv 143 (211)
.++||+|++|... .. +.++++.+.+.|+|+|.++.
T Consensus 280 ~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 280 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred hccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4689999999521 11 26789999999999776554
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.82 E-value=1.5e-08 Score=93.83 Aligned_cols=122 Identities=8% Similarity=-0.050 Sum_probs=92.9
Q ss_pred cCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCC----------------cEEEEEeCChhHHHHHHH
Q 041509 22 KAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTG----------------GRVVCILRRVEEYKLSKK 85 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~----------------g~v~tiE~~~~~~~~Ar~ 85 (211)
..-++...+++..++...+..+|+|. +||+|.+.+.++..+.... .+++++|+++.+++.|+.
T Consensus 151 fyTP~~iv~~mv~~l~p~~~~~VlDP-aCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~ 229 (541)
T 2ar0_A 151 YFTPRPLIKTIIHLLKPQPREVVQDP-AAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALM 229 (541)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCCEEET-TCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHhccCCCCeEecC-CcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHH
Confidence 34555677888888877777899999 7999999888887764322 379999999999999999
Q ss_pred Hhc--CCCC----cEEEEEcchHHHhhhccCCccEEEEcCCcC-----------------cHHHHHHHHHhcCCCCcEEE
Q 041509 86 ILG--LDAS----HVEFVIGDAQSLLLSHFREADFVLIDCNLE-----------------NHEGVLRAVQAGNKPNGAVV 142 (211)
Q Consensus 86 ~~~--~~~~----~V~~~~gda~e~l~~l~~~fD~VfiD~~~~-----------------~y~~~l~~~~~~L~pgG~vi 142 (211)
|+. +... ++.+++||++.......++||+|+.+.+.. .+..+++.+.+.|+|||.+.
T Consensus 230 nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 309 (541)
T 2ar0_A 230 NCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAA 309 (541)
T ss_dssp HHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEE
Confidence 987 4332 278999999765432257899999986422 13468899999999988765
Q ss_pred EE
Q 041509 143 VG 144 (211)
Q Consensus 143 v~ 144 (211)
++
T Consensus 310 ~V 311 (541)
T 2ar0_A 310 VV 311 (541)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 266
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.82 E-value=2e-11 Score=101.62 Aligned_cols=117 Identities=10% Similarity=-0.016 Sum_probs=84.6
Q ss_pred CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchH
Q 041509 23 AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQ 102 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~ 102 (211)
..++...+.+...+...+..+|||+ |||+|..|..++.. +++|++||+++++++.|++++. ..++++++++|+.
T Consensus 12 l~~~~~~~~i~~~~~~~~~~~VLDi-G~G~G~~~~~l~~~----~~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~ 85 (245)
T 1yub_A 12 LTSEKVLNQIIKQLNLKETDTVYEI-GTGKGHLTTKLAKI----SKQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDIL 85 (245)
T ss_dssp CCCTTTHHHHHHHCCCCSSEEEEEC-SCCCSSCSHHHHHH----SSEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCT
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEE-eCCCCHHHHHHHHh----CCeEEEEECCHHHHHHHHHHhc-cCCceEEEECChh
Confidence 4566677766666666677899999 99999999999876 4799999999999999998876 2468999999998
Q ss_pred HHhhhccCCccEEEEcCCcCc----HHH----------HH----HHHHhcCCCCcEEEEEec
Q 041509 103 SLLLSHFREADFVLIDCNLEN----HEG----------VL----RAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~~----y~~----------~l----~~~~~~L~pgG~viv~dn 146 (211)
+......++| .|+.+.+-.. ... ++ +.+.++|+|||.+.+...
T Consensus 86 ~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 86 QFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp TTTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred hcCcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 7632112568 6666643211 111 22 556777888887766443
No 267
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.81 E-value=2.6e-08 Score=83.45 Aligned_cols=106 Identities=16% Similarity=0.052 Sum_probs=76.3
Q ss_pred cCCc-CCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEE
Q 041509 19 MGQK-AKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFV 97 (211)
Q Consensus 19 ~~~~-~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~ 97 (211)
.++. ..++...+.+...+...+..+|||| |||+|..|..|+.. ..++|++||+|+.+++.++++ . ..+++++
T Consensus 9 ~GQnfl~d~~i~~~iv~~~~~~~~~~VLDi-G~G~G~lt~~L~~~---~~~~v~avEid~~~~~~~~~~-~--~~~v~~i 81 (249)
T 3ftd_A 9 FGQHLLVSEGVLKKIAEELNIEEGNTVVEV-GGGTGNLTKVLLQH---PLKKLYVIELDREMVENLKSI-G--DERLEVI 81 (249)
T ss_dssp CCSSCEECHHHHHHHHHHTTCCTTCEEEEE-ESCHHHHHHHHTTS---CCSEEEEECCCHHHHHHHTTS-C--CTTEEEE
T ss_pred ccccccCCHHHHHHHHHhcCCCCcCEEEEE-cCchHHHHHHHHHc---CCCeEEEEECCHHHHHHHHhc-c--CCCeEEE
Confidence 3554 3567777777777777778899999 99999999999864 147999999999999999988 3 4689999
Q ss_pred EcchHHHh-hhccCCccEEEEcCCcCcHHHHHHHHH
Q 041509 98 IGDAQSLL-LSHFREADFVLIDCNLENHEGVLRAVQ 132 (211)
Q Consensus 98 ~gda~e~l-~~l~~~fD~VfiD~~~~~y~~~l~~~~ 132 (211)
+||+.+.- +.+.+++ .|+.+.+-..-...+..+.
T Consensus 82 ~~D~~~~~~~~~~~~~-~vv~NlPy~i~~~il~~ll 116 (249)
T 3ftd_A 82 NEDASKFPFCSLGKEL-KVVGNLPYNVASLIIENTV 116 (249)
T ss_dssp CSCTTTCCGGGSCSSE-EEEEECCTTTHHHHHHHHH
T ss_pred EcchhhCChhHccCCc-EEEEECchhccHHHHHHHH
Confidence 99998762 3222333 5665655433344444443
No 268
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.81 E-value=4.2e-09 Score=91.73 Aligned_cols=98 Identities=14% Similarity=0.135 Sum_probs=78.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
.+..+|||+ |||+|..+..+++..+ +.+++++|+ |++++.|++. .+|+++.+|+.+.++ .||+|++-
T Consensus 187 ~~~~~vlDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~~~p----~~D~v~~~ 253 (352)
T 1fp2_A 187 DGLESIVDV-GGGTGTTAKIICETFP--KLKCIVFDR-PQVVENLSGS-----NNLTYVGGDMFTSIP----NADAVLLK 253 (352)
T ss_dssp TTCSEEEEE-TCTTSHHHHHHHHHCT--TCEEEEEEC-HHHHTTCCCB-----TTEEEEECCTTTCCC----CCSEEEEE
T ss_pred ccCceEEEe-CCCccHHHHHHHHHCC--CCeEEEeeC-HHHHhhcccC-----CCcEEEeccccCCCC----CccEEEee
Confidence 456899999 9999999999998874 579999999 9998877652 359999999976322 49999986
Q ss_pred CCcC-----cHHHHHHHHHhcCCC---CcEEEEEecCCC
Q 041509 119 CNLE-----NHEGVLRAVQAGNKP---NGAVVVGYNAFR 149 (211)
Q Consensus 119 ~~~~-----~y~~~l~~~~~~L~p---gG~viv~dn~~~ 149 (211)
.-.. .....++.+.+.|+| ||.+++.|....
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 5322 234889999999999 999999876543
No 269
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.79 E-value=3e-09 Score=93.41 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=77.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
.++.+|||+ |||+|..+..+++..+ +.+++.+|+ |.+++.|++. .+|+++.+|+.+.+ .. ||+|++.
T Consensus 208 ~~~~~vLDv-G~G~G~~~~~l~~~~~--~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~~~---~~-~D~v~~~ 274 (372)
T 1fp1_D 208 EGISTLVDV-GGGSGRNLELIISKYP--LIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFASV---PQ-GDAMILK 274 (372)
T ss_dssp TTCSEEEEE-TCTTSHHHHHHHHHCT--TCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTTCC---CC-EEEEEEE
T ss_pred CCCCEEEEe-CCCCcHHHHHHHHHCC--CCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCcccCC---CC-CCEEEEe
Confidence 356899999 9999999999999874 579999999 9888777642 46999999997632 23 9999986
Q ss_pred CCcC---c--HHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 119 CNLE---N--HEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 119 ~~~~---~--y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
.-.. + ....++.+.+.|+|||.+++.|....
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 5432 2 23889999999999999998875443
No 270
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.76 E-value=2.5e-08 Score=83.78 Aligned_cols=91 Identities=12% Similarity=-0.057 Sum_probs=66.9
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS 103 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e 103 (211)
.++...+.+...+...+..+|||| |||+|+.|. ++.+ . .++|++||+|+++++.+++++... +++++++||+.+
T Consensus 5 ~d~~i~~~iv~~~~~~~~~~VLEI-G~G~G~lt~-l~~~--~-~~~v~avEid~~~~~~a~~~~~~~-~~v~~i~~D~~~ 78 (252)
T 1qyr_A 5 NDQFVIDSIVSAINPQKGQAMVEI-GPGLAALTE-PVGE--R-LDQLTVIELDRDLAARLQTHPFLG-PKLTIYQQDAMT 78 (252)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEEE-CCTTTTTHH-HHHT--T-CSCEEEECCCHHHHHHHHTCTTTG-GGEEEECSCGGG
T ss_pred CCHHHHHHHHHhcCCCCcCEEEEE-CCCCcHHHH-hhhC--C-CCeEEEEECCHHHHHHHHHHhccC-CceEEEECchhh
Confidence 456666666666666777899999 999999999 6532 1 234999999999999999987632 589999999987
Q ss_pred H-hhhcc---CCccEEEEcCC
Q 041509 104 L-LLSHF---READFVLIDCN 120 (211)
Q Consensus 104 ~-l~~l~---~~fD~VfiD~~ 120 (211)
. ++.+. +..|.|+.+.+
T Consensus 79 ~~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 79 FNFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp CCHHHHHHHHTSCEEEEEECC
T ss_pred CCHHHhhcccCCceEEEECCC
Confidence 5 23221 24567776654
No 271
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.76 E-value=1.3e-09 Score=92.88 Aligned_cols=95 Identities=14% Similarity=-0.089 Sum_probs=68.8
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc---CCCCcEEEE--EcchHHHhhhccCCcc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG---LDASHVEFV--IGDAQSLLLSHFREAD 113 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~---~~~~~V~~~--~gda~e~l~~l~~~fD 113 (211)
.+.++|||+ |||+|..+..+++. ++|++||+++ +...|+++.. ....+++++ .+|+.++ + .++||
T Consensus 81 ~~g~~VLDl-GcGtG~~s~~la~~-----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~--~~~fD 150 (276)
T 2wa2_A 81 ELKGTVVDL-GCGRGSWSYYAASQ-----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM-E--PFQAD 150 (276)
T ss_dssp CCCEEEEEE-SCTTCHHHHHHHTS-----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC-C--CCCCS
T ss_pred CCCCEEEEe-ccCCCHHHHHHHHc-----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC-C--CCCcC
Confidence 356789999 99999999988853 6899999999 5433332211 112278999 9998874 3 57899
Q ss_pred EEEEcCCc--CcH-------HHHHHHHHhcCCCCc--EEEE
Q 041509 114 FVLIDCNL--ENH-------EGVLRAVQAGNKPNG--AVVV 143 (211)
Q Consensus 114 ~VfiD~~~--~~y-------~~~l~~~~~~L~pgG--~viv 143 (211)
+|+.|... ..+ ...++.+.+.|+||| .+++
T Consensus 151 ~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 151 TVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred EEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 99999651 111 136788888999999 7776
No 272
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.74 E-value=4.2e-08 Score=82.27 Aligned_cols=107 Identities=12% Similarity=-0.051 Sum_probs=77.1
Q ss_pred HHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhcc
Q 041509 30 EFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHF 109 (211)
Q Consensus 30 ~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~ 109 (211)
+|.........|.+|||+ |||+|..++.++ ...+++++|+|+.+++.+++++.....+.++.++|.....+ .
T Consensus 95 ~fY~~i~~~~~p~~VLDl-GCG~gpLal~~~-----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~--~ 166 (253)
T 3frh_A 95 TLYDFIFSAETPRRVLDI-ACGLNPLALYER-----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPP--A 166 (253)
T ss_dssp HHHHHHTSSCCCSEEEEE-TCTTTHHHHHHT-----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCC--C
T ss_pred HHHHHHhcCCCCCeEEEe-cCCccHHHHHhc-----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCC--C
Confidence 344444444578999999 999999877665 27899999999999999999987334778999999876543 5
Q ss_pred CCccEEEEcCCc-----CcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 110 READFVLIDCNL-----ENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 110 ~~fD~VfiD~~~-----~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
++||+|++--.- ..-...+ .+...|+++|.+|-++
T Consensus 167 ~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 167 EAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp CBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred CCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 799999765211 1111223 4555678877666655
No 273
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.73 E-value=1.7e-08 Score=86.59 Aligned_cols=90 Identities=12% Similarity=0.029 Sum_probs=67.4
Q ss_pred hCCCCeEEEEccc------cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEE-EEcchHHHhhhccC
Q 041509 38 GNNAQLMVVACAN------VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEF-VIGDAQSLLLSHFR 110 (211)
Q Consensus 38 ~~~~~~VLEi~Gt------g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~-~~gda~e~l~~l~~ 110 (211)
..+..+|||+ || |+|. ..+++.+++ +++|+++|+++. + .++++ ++||+.+.. ..+
T Consensus 61 l~~g~~VLDL-GcGsg~~~GpGs--~~~a~~~~~-~~~V~gvDis~~--------v----~~v~~~i~gD~~~~~--~~~ 122 (290)
T 2xyq_A 61 VPYNMRVIHF-GAGSDKGVAPGT--AVLRQWLPT-GTLLVDSDLNDF--------V----SDADSTLIGDCATVH--TAN 122 (290)
T ss_dssp CCTTCEEEEE-SCCCTTSBCHHH--HHHHHHSCT-TCEEEEEESSCC--------B----CSSSEEEESCGGGCC--CSS
T ss_pred CCCCCEEEEe-CCCCCCCCCcHH--HHHHHHcCC-CCEEEEEECCCC--------C----CCCEEEEECccccCC--ccC
Confidence 4566799999 89 6676 445655543 689999999998 1 35788 999998742 247
Q ss_pred CccEEEEcCCcC--------------cHHHHHHHHHhcCCCCcEEEEEe
Q 041509 111 EADFVLIDCNLE--------------NHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 111 ~fD~VfiD~~~~--------------~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+||+|+.|.... .+.+.++.+.+.|+|||.+++..
T Consensus 123 ~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 123 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp CEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 899999985321 24578999999999988887743
No 274
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.71 E-value=1.9e-09 Score=91.21 Aligned_cols=95 Identities=13% Similarity=0.003 Sum_probs=68.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc---CCCCcEEEE--EcchHHHhhhccCCcc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG---LDASHVEFV--IGDAQSLLLSHFREAD 113 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~---~~~~~V~~~--~gda~e~l~~l~~~fD 113 (211)
.+.++|||+ |||+|..+..+++. ++|++||+++ ++..+++... ....+|+++ .+|+.++ + .++||
T Consensus 73 ~~g~~VLDl-GcGtG~~s~~la~~-----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~--~~~fD 142 (265)
T 2oxt_A 73 ELTGRVVDL-GCGRGGWSYYAASR-----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL-P--VERTD 142 (265)
T ss_dssp CCCEEEEEE-SCTTSHHHHHHHTS-----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS-C--CCCCS
T ss_pred CCCCEEEEe-CcCCCHHHHHHHHc-----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC-C--CCCCc
Confidence 456789999 99999999888753 7899999999 5333322111 112278999 8999874 3 57899
Q ss_pred EEEEcCCc--CcH----H---HHHHHHHhcCCCCc--EEEE
Q 041509 114 FVLIDCNL--ENH----E---GVLRAVQAGNKPNG--AVVV 143 (211)
Q Consensus 114 ~VfiD~~~--~~y----~---~~l~~~~~~L~pgG--~viv 143 (211)
+|+.|... .++ . ..++.+.+.|+||| .+++
T Consensus 143 ~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 143 VIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 99999651 111 1 36788888999999 7776
No 275
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.69 E-value=1.9e-08 Score=85.28 Aligned_cols=112 Identities=13% Similarity=-0.061 Sum_probs=80.8
Q ss_pred HHHHHHHHhh-CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhh
Q 041509 29 AEFISALAAG-NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLS 107 (211)
Q Consensus 29 ~~lL~~l~~~-~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~ 107 (211)
-+|...+... ..|.+|||| |||+|-.++.++... +..+++++|+|+.+++.+++|+..+.-..++.+.|...-.+
T Consensus 120 D~fY~~i~~~i~~p~~VLDL-GCG~GpLAl~~~~~~--p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p- 195 (281)
T 3lcv_B 120 DEFYRELFRHLPRPNTLRDL-ACGLNPLAAPWMGLP--AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRL- 195 (281)
T ss_dssp HHHHHHHGGGSCCCSEEEET-TCTTGGGCCTTTTCC--TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCC-
T ss_pred HHHHHHHHhccCCCceeeee-ccCccHHHHHHHhhC--CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCC-
Confidence 3444444443 458999999 999999888887643 37899999999999999999998323348888999876543
Q ss_pred ccCCccEEEEcCCcC-----cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 108 HFREADFVLIDCNLE-----NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 108 l~~~fD~VfiD~~~~-----~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
.++||++++--.-. .-...+ .+.+.|+|+|.+|.++-
T Consensus 196 -~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 196 -DEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp -CSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred -CCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 68999998753221 112334 56667888777766654
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.68 E-value=7.9e-08 Score=91.56 Aligned_cols=121 Identities=7% Similarity=-0.108 Sum_probs=86.1
Q ss_pred CChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHcc---------------------------------------
Q 041509 24 KEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAH--------------------------------------- 64 (211)
Q Consensus 24 ~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~--------------------------------------- 64 (211)
+.+..+..+..++...+...|||. +||+|...+.+|....
T Consensus 174 l~e~LAa~ll~~~~~~~~~~llDP-~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 174 IKETLAAAIVMRSGWQPGTPLLDP-MCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SCHHHHHHHHHHTTCCTTSCEEET-TCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhCCCCCCeEEec-CCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 445556666666655567789999 7999999888776531
Q ss_pred -CCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhc-cCCccEEEEcCCcC-------cHHHHHHHHH-
Q 041509 65 -QTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSH-FREADFVLIDCNLE-------NHEGVLRAVQ- 132 (211)
Q Consensus 65 -~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~-------~y~~~l~~~~- 132 (211)
....+|+++|+|+.+++.|++|+. ++.+.|+|..+|+.+..+.. .++||+|+.+.+-. +..+.++.+.
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 113589999999999999999998 77778999999999864322 23899999997532 2233343333
Q ss_pred --hcCCCCcEEEEEe
Q 041509 133 --AGNKPNGAVVVGY 145 (211)
Q Consensus 133 --~~L~pgG~viv~d 145 (211)
+.+.|||.+++..
T Consensus 333 ~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 333 IMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHCTTCEEEEEE
T ss_pred HHHhhCCCCeEEEEe
Confidence 3345788877653
No 277
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.66 E-value=1.3e-08 Score=87.80 Aligned_cols=94 Identities=15% Similarity=-0.020 Sum_probs=66.8
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeC----ChhHHHHHHHHhcCC-CCcEEEEEc-chHHHhhhccCCc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILR----RVEEYKLSKKILGLD-ASHVEFVIG-DAQSLLLSHFREA 112 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~----~~~~~~~Ar~~~~~~-~~~V~~~~g-da~e~l~~l~~~f 112 (211)
.+.++|||+ |||+|..|..+++. ++|++||. ++.+++.+ ..+.. .++|+++.+ |+.+. + .++|
T Consensus 81 ~~g~~VLDl-GcG~G~~s~~la~~-----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l-~--~~~f 149 (305)
T 2p41_A 81 TPEGKVVDL-GCGRGGWSYYCGGL-----KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFI-P--PERC 149 (305)
T ss_dssp CCCEEEEEE-TCTTSHHHHHHHTS-----TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTS-C--CCCC
T ss_pred CCCCEEEEE-cCCCCHHHHHHHhc-----CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccC-C--cCCC
Confidence 345789999 89999999998864 58999999 55433211 11211 257999999 88764 2 4689
Q ss_pred cEEEEcCCcC--c----HH---HHHHHHHhcCCCCcEEEE
Q 041509 113 DFVLIDCNLE--N----HE---GVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 113 D~VfiD~~~~--~----y~---~~l~~~~~~L~pgG~viv 143 (211)
|+|+.|.... . .. ..++.+.+.|+|||.+++
T Consensus 150 D~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 150 DTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 9999997532 1 11 467778889999997765
No 278
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.64 E-value=5.5e-08 Score=84.78 Aligned_cols=97 Identities=14% Similarity=0.096 Sum_probs=76.9
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDC 119 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~ 119 (211)
+..+|||+ |||+|..+..+++..+ +.+++.+|. +.+++.|++ ..+|+++.+|+.+ + + ..||+|++-.
T Consensus 193 ~~~~vlDv-G~G~G~~~~~l~~~~p--~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~--~-~-~~~D~v~~~~ 259 (358)
T 1zg3_A 193 GLESLVDV-GGGTGGVTKLIHEIFP--HLKCTVFDQ-PQVVGNLTG-----NENLNFVGGDMFK--S-I-PSADAVLLKW 259 (358)
T ss_dssp TCSEEEEE-TCTTSHHHHHHHHHCT--TSEEEEEEC-HHHHSSCCC-----CSSEEEEECCTTT--C-C-CCCSEEEEES
T ss_pred CCCEEEEE-CCCcCHHHHHHHHHCC--CCeEEEecc-HHHHhhccc-----CCCcEEEeCccCC--C-C-CCceEEEEcc
Confidence 56899999 9999999999999874 579999999 788876654 1359999999986 2 2 2599999865
Q ss_pred CcC---c--HHHHHHHHHhcCCC---CcEEEEEecCCC
Q 041509 120 NLE---N--HEGVLRAVQAGNKP---NGAVVVGYNAFR 149 (211)
Q Consensus 120 ~~~---~--y~~~l~~~~~~L~p---gG~viv~dn~~~ 149 (211)
-.. + ....++.+.+.|+| ||.+++.|....
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 322 2 34889999999999 999999876543
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.62 E-value=5.5e-08 Score=91.52 Aligned_cols=97 Identities=19% Similarity=0.108 Sum_probs=72.7
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCC--cEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTG--GRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~--g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
+.+.|+++ |||+|......+.|....+ -+|++||.+| ++..|++..+ +..++|++++||..++- +.++.|+|
T Consensus 357 ~~~vVldV-GaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~--LPEKVDII 432 (637)
T 4gqb_A 357 NVQVLMVL-GAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV--APEKADII 432 (637)
T ss_dssp CEEEEEEE-SCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC--CSSCEEEE
T ss_pred CCcEEEEE-CCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc--CCcccCEE
Confidence 34579999 9999998555555443322 2789999998 6778888887 77899999999999873 46899999
Q ss_pred EEcCC-----cCcHHHHHHHHHhcCCCCcE
Q 041509 116 LIDCN-----LENHEGVLRAVQAGNKPNGA 140 (211)
Q Consensus 116 fiD~~-----~~~y~~~l~~~~~~L~pgG~ 140 (211)
+..-- .+.-.+.+....+.|+|||.
T Consensus 433 VSEwMG~fLl~E~mlevL~Ardr~LKPgGi 462 (637)
T 4gqb_A 433 VSELLGSFADNELSPECLDGAQHFLKDDGV 462 (637)
T ss_dssp ECCCCBTTBGGGCHHHHHHHHGGGEEEEEE
T ss_pred EEEcCcccccccCCHHHHHHHHHhcCCCcE
Confidence 96521 22335677777888999664
No 280
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.52 E-value=4.5e-07 Score=84.02 Aligned_cols=130 Identities=12% Similarity=-0.023 Sum_probs=96.1
Q ss_pred CCcCCChhHHHHHHHHHh----hCCCCeEEEEccccHHHHHHHHHHHccC-CCcEEEEEeCChhHHHHHHHHhc--CCC-
Q 041509 20 GQKAKEPNEAEFISALAA----GNNAQLMVVACANVANATTLALAAAAHQ-TGGRVVCILRRVEEYKLSKKILG--LDA- 91 (211)
Q Consensus 20 ~~~~~~~~~~~lL~~l~~----~~~~~~VLEi~Gtg~G~stl~la~a~~~-~~g~v~tiE~~~~~~~~Ar~~~~--~~~- 91 (211)
++..-++...+++..++. ..+..+|+|. +||+|...+.++..+.. ...+++++|+++.++++|+.|+. +..
T Consensus 197 G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDP-aCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 275 (542)
T 3lkd_A 197 GEFYTPQPVAKLMTQIAFLGREDKQGFTLYDA-TMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI 275 (542)
T ss_dssp SSCCCCHHHHHHHHHHHHTTCTTCTTCEEEET-TCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred CeecccHHHHHHHHHHHhcccCCCCCCEEeec-ccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc
Confidence 334566778899988887 4466799999 69999988888877642 24689999999999999999987 543
Q ss_pred CcEEEEEcchHHHh-h-hccCCccEEEEcCCcC-------------c---H----------HHHHHHHHhcCC-CCcEEE
Q 041509 92 SHVEFVIGDAQSLL-L-SHFREADFVLIDCNLE-------------N---H----------EGVLRAVQAGNK-PNGAVV 142 (211)
Q Consensus 92 ~~V~~~~gda~e~l-~-~l~~~fD~VfiD~~~~-------------~---y----------~~~l~~~~~~L~-pgG~vi 142 (211)
+++.+.+||....- + ....+||+|+.+++-. . | ..+++.+...|+ |||.+.
T Consensus 276 ~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 276 ENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp GGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred CccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 57999999998651 1 1256899999874311 0 1 247889999999 999864
Q ss_pred EE--ecCCCC
Q 041509 143 VG--YNAFRK 150 (211)
Q Consensus 143 v~--dn~~~~ 150 (211)
++ +..+..
T Consensus 356 ~VlP~g~Lf~ 365 (542)
T 3lkd_A 356 IVLPHGVLFR 365 (542)
T ss_dssp EEEETHHHHC
T ss_pred EEecchHhhC
Confidence 33 344443
No 281
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.51 E-value=2.2e-07 Score=79.28 Aligned_cols=119 Identities=17% Similarity=0.105 Sum_probs=90.5
Q ss_pred ChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH
Q 041509 25 EPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL 104 (211)
Q Consensus 25 ~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~ 104 (211)
++....++..+.. .++..+||+ .+|+|..++.+.+ . +.+++.||.+++..+..++|++. .++++++.+|+...
T Consensus 77 p~~l~~yf~~l~~-~n~~~~LDl-faGSGaLgiEaLS---~-~d~~vfvE~~~~a~~~L~~Nl~~-~~~~~V~~~D~~~~ 149 (283)
T 2oo3_A 77 PSLFLEYISVIKQ-INLNSTLSY-YPGSPYFAINQLR---S-QDRLYLCELHPTEYNFLLKLPHF-NKKVYVNHTDGVSK 149 (283)
T ss_dssp CGGGHHHHHHHHH-HSSSSSCCE-EECHHHHHHHHSC---T-TSEEEEECCSHHHHHHHTTSCCT-TSCEEEECSCHHHH
T ss_pred cHHHHHHHHHHHH-hcCCCceeE-eCCcHHHHHHHcC---C-CCeEEEEeCCHHHHHHHHHHhCc-CCcEEEEeCcHHHH
Confidence 3334455555544 467789999 6999998777654 2 57999999999999999999985 47899999999988
Q ss_pred hhhc---cCCccEEEEcCCcC---cHHHHHHHHHh--cCCCCcEEEEEecCCCC
Q 041509 105 LLSH---FREADFVLIDCNLE---NHEGVLRAVQA--GNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 105 l~~l---~~~fD~VfiD~~~~---~y~~~l~~~~~--~L~pgG~viv~dn~~~~ 150 (211)
+..+ ..+||+||+|.+-+ .|.+.++.+.+ .+.|+|.+++=.-++.+
T Consensus 150 L~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~ 203 (283)
T 2oo3_A 150 LNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNK 203 (283)
T ss_dssp HHHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSH
T ss_pred HHHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccch
Confidence 8755 23799999998543 67777777765 36778888876665553
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.50 E-value=2.2e-07 Score=88.11 Aligned_cols=99 Identities=12% Similarity=0.051 Sum_probs=72.4
Q ss_pred CCeEEEEccccHHHHHHHHHHHccC-----------CCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHHhhh-
Q 041509 41 AQLMVVACANVANATTLALAAAAHQ-----------TGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSLLLS- 107 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~-----------~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~l~~- 107 (211)
.+.|||+ |||+|......+.|... ...+|++||.+|.+....+.... +..++|+++.||..++-..
T Consensus 410 ~~VVldV-GaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLL-GGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEE-SCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEE-CCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccc
Confidence 4579999 99999986544333311 13499999999987766555555 7789999999999987320
Q ss_pred ---ccCCccEEEEcCC-----cCcHHHHHHHHHhcCCCCcE
Q 041509 108 ---HFREADFVLIDCN-----LENHEGVLRAVQAGNKPNGA 140 (211)
Q Consensus 108 ---l~~~fD~VfiD~~-----~~~y~~~l~~~~~~L~pgG~ 140 (211)
..++.|+|+..-- .+...+.+..+.+.|+|+|.
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi 529 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTI 529 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcE
Confidence 1579999997632 23456788888888999774
No 283
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.48 E-value=7.8e-08 Score=89.12 Aligned_cols=128 Identities=10% Similarity=-0.070 Sum_probs=91.8
Q ss_pred CcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCC-------------CcEEEEEeCChhHHHHHHHHh
Q 041509 21 QKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQT-------------GGRVVCILRRVEEYKLSKKIL 87 (211)
Q Consensus 21 ~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~-------------~g~v~tiE~~~~~~~~Ar~~~ 87 (211)
+..-++...+++..++...+ .+|+|. +||+|.+.+.++..+... ..+++++|+++.++++|+.|+
T Consensus 226 ~fyTP~~Vv~lmv~ll~p~~-~~VlDP-aCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl 303 (544)
T 3khk_A 226 QYYTPKSIVTLIVEMLEPYK-GRVYDP-AMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNM 303 (544)
T ss_dssp TTCCCHHHHHHHHHHHCCCS-EEEEES-SCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHH
T ss_pred eEeCCHHHHHHHHHHHhcCC-CeEeCc-ccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHH
Confidence 34567778899988887644 489999 699998877765543210 358999999999999999998
Q ss_pred c--CCCCcEEEEEcchHHHhhhccCCccEEEEcCCcCc--------------------------------HHHHHHHHHh
Q 041509 88 G--LDASHVEFVIGDAQSLLLSHFREADFVLIDCNLEN--------------------------------HEGVLRAVQA 133 (211)
Q Consensus 88 ~--~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~~--------------------------------y~~~l~~~~~ 133 (211)
. +...++.+.+||++........+||+|+.+.+-.. ...+++.+.+
T Consensus 304 ~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~ 383 (544)
T 3khk_A 304 VIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLY 383 (544)
T ss_dssp HHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHH
T ss_pred HHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHH
Confidence 7 65556666899987542212468999998754221 1257889999
Q ss_pred cCCCCcEEEEE--ecCCCC
Q 041509 134 GNKPNGAVVVG--YNAFRK 150 (211)
Q Consensus 134 ~L~pgG~viv~--dn~~~~ 150 (211)
.|+|||.+.++ +..+..
T Consensus 384 ~Lk~gGr~aiVlP~g~L~~ 402 (544)
T 3khk_A 384 HLAPTGSMALLLANGSMSS 402 (544)
T ss_dssp TEEEEEEEEEEEETHHHHC
T ss_pred HhccCceEEEEecchhhhc
Confidence 99999885443 344443
No 284
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.39 E-value=1.7e-07 Score=73.04 Aligned_cols=87 Identities=13% Similarity=0.081 Sum_probs=67.8
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhh--ccCCccEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLS--HFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~--l~~~fD~V 115 (211)
..++.+||++ |||. +++|.+++|++.|++++.. +++++++|+.+.... ..++||+|
T Consensus 10 ~~~g~~vL~~-~~g~------------------v~vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 10 ISAGQFVAVV-WDKS------------------SPVEALKGLVDKLQALTGN---EGRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp CCTTSEEEEE-ECTT------------------SCHHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred CCCCCEEEEe-cCCc------------------eeeeCCHHHHHHHHHhccc---CcEEEEechhcCccccCCCCCEeEE
Confidence 3567899999 8874 2399999999999998652 489999999876431 26789999
Q ss_pred EEcCC---c-CcHHHHHHHHHhcCCCCcEEEEEec
Q 041509 116 LIDCN---L-ENHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 116 fiD~~---~-~~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+.... . .+..+.++++.+.|+|||.+++.+.
T Consensus 68 ~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 68 LSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 98532 2 4568899999999999998888554
No 285
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.36 E-value=2.6e-06 Score=72.74 Aligned_cols=86 Identities=22% Similarity=0.238 Sum_probs=69.7
Q ss_pred HHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH---hhh
Q 041509 31 FISALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL---LLS 107 (211)
Q Consensus 31 lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~---l~~ 107 (211)
.+..+ ...+...+||. +||.|.-|..|++. +|+|+++|.||++++.|++ ++. +++++++++..++ +..
T Consensus 14 ~le~L-~~~~gg~~VD~-T~G~GGHS~~il~~----~g~VigiD~Dp~Ai~~A~~-L~~--~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 14 ALDLL-AVRPGGVYVDA-TLGGAGHARGILER----GGRVIGLDQDPEAVARAKG-LHL--PGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp HHHHH-TCCTTCEEEET-TCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHH-TCC--TTEEEEESCGGGHHHHHHH
T ss_pred HHHhh-CCCCCCEEEEe-CCCCcHHHHHHHHC----CCEEEEEeCCHHHHHHHHh-hcc--CCEEEEECCcchHHHHHHH
Confidence 34433 45667899999 89999999999975 6899999999999999999 764 6899999999876 333
Q ss_pred c-cCCccEEEEcCCcCcHH
Q 041509 108 H-FREADFVLIDCNLENHE 125 (211)
Q Consensus 108 l-~~~fD~VfiD~~~~~y~ 125 (211)
. .+++|.|+.|...+.++
T Consensus 85 ~g~~~vDgIL~DLGvSS~Q 103 (285)
T 1wg8_A 85 LGVERVDGILADLGVSSFH 103 (285)
T ss_dssp TTCSCEEEEEEECSCCHHH
T ss_pred cCCCCcCEEEeCCcccccc
Confidence 2 25899999998876544
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.30 E-value=4.5e-06 Score=80.33 Aligned_cols=122 Identities=10% Similarity=-0.035 Sum_probs=84.7
Q ss_pred cCCChhHHHHHHHHHh--h----CCCCeEEEEccccHHHHHHHHHHHccC-CCcEEEEEeCChhHHHHH--HHHhc--CC
Q 041509 22 KAKEPNEAEFISALAA--G----NNAQLMVVACANVANATTLALAAAAHQ-TGGRVVCILRRVEEYKLS--KKILG--LD 90 (211)
Q Consensus 22 ~~~~~~~~~lL~~l~~--~----~~~~~VLEi~Gtg~G~stl~la~a~~~-~~g~v~tiE~~~~~~~~A--r~~~~--~~ 90 (211)
...++..++++..++. . .++.+|||. |||+|...+.++..++. ...+++++|+++.+++.| +.|+. ..
T Consensus 297 FYTP~eLA~lMVeLA~ill~~~l~~g~rVLDP-aCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~L 375 (878)
T 3s1s_A 297 VPTDIELGKVLSIISQHILGRPLTEDEVISDP-AAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQL 375 (878)
T ss_dssp SSCCHHHHHHHHHHHHHHHCSCCCTTCEEEET-TCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTT
T ss_pred EcCCHHHHHHHHHHHhhhccccCCCCCEEEEC-CCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhh
Confidence 3566777888877732 1 236689999 79999998888877642 136899999999999999 77664 11
Q ss_pred ---CCcEEEEEcchHHHhhhccCCccEEEEcCCcC--------------------------------cHHHHHHHHHhcC
Q 041509 91 ---ASHVEFVIGDAQSLLLSHFREADFVLIDCNLE--------------------------------NHEGVLRAVQAGN 135 (211)
Q Consensus 91 ---~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~--------------------------------~y~~~l~~~~~~L 135 (211)
.....+..+|..+.-....++||+|+.+.+-. .|..+++.+.++|
T Consensus 376 lhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lL 455 (878)
T 3s1s_A 376 VSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELV 455 (878)
T ss_dssp CBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHS
T ss_pred hcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhc
Confidence 12245666676653222257899999886431 1344677888899
Q ss_pred CCCcEEEEE
Q 041509 136 KPNGAVVVG 144 (211)
Q Consensus 136 ~pgG~viv~ 144 (211)
+|||.+.+.
T Consensus 456 KpGGrLAfI 464 (878)
T 3s1s_A 456 QDGTVISAI 464 (878)
T ss_dssp CTTCEEEEE
T ss_pred CCCcEEEEE
Confidence 999986554
No 287
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.24 E-value=2.5e-06 Score=80.63 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=72.9
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccC--------C--CcEEEEEeCChhHHHHHHHHh--------------c------
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQ--------T--GGRVVCILRRVEEYKLSKKIL--------------G------ 88 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~--------~--~g~v~tiE~~~~~~~~Ar~~~--------------~------ 88 (211)
.++-+|+|+ |.|+|+..+.+.++... . .-+++++|..|-..+..++.+ +
T Consensus 57 ~~~~~i~e~-gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~ 135 (689)
T 3pvc_A 57 QQSCIFAET-GFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPL 135 (689)
T ss_dssp SSEEEEEEE-CCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCC
T ss_pred CCceEEEEe-cCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccC
Confidence 345679999 89999999988776421 1 157899999664444444311 1
Q ss_pred ------CCC---CcEEEEEcchHHHhhhc----cCCccEEEEcCCcCcH------HHHHHHHHhcCCCCcEE
Q 041509 89 ------LDA---SHVEFVIGDAQSLLLSH----FREADFVLIDCNLENH------EGVLRAVQAGNKPNGAV 141 (211)
Q Consensus 89 ------~~~---~~V~~~~gda~e~l~~l----~~~fD~VfiD~~~~~y------~~~l~~~~~~L~pgG~v 141 (211)
.+. -.++++.||+.+.++++ ...+|.+|+|+-.+.+ .+++..+.++++||+.+
T Consensus 136 ~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~ 207 (689)
T 3pvc_A 136 AGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTF 207 (689)
T ss_dssp SEEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEE
T ss_pred CCceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEE
Confidence 011 25889999999999987 4789999999865544 88999999999986543
No 288
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.90 E-value=3.5e-05 Score=59.69 Aligned_cols=83 Identities=14% Similarity=0.081 Sum_probs=60.2
Q ss_pred CCCeEEEEccccHH-HHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEE-EE
Q 041509 40 NAQLMVVACANVAN-ATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFV-LI 117 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G-~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~V-fi 117 (211)
.+.+|||+ |||.| ..|.+|++-. +-.|+++|++|..++ ++.+|..+-..++-+.||+| -+
T Consensus 35 ~~~rVlEV-G~G~g~~vA~~La~~~---g~~V~atDInp~Av~--------------~v~dDiF~P~~~~Y~~~DLIYsi 96 (153)
T 2k4m_A 35 PGTRVVEV-GAGRFLYVSDYIRKHS---KVDLVLTDIKPSHGG--------------IVRDDITSPRMEIYRGAALIYSI 96 (153)
T ss_dssp SSSEEEEE-TCTTCCHHHHHHHHHS---CCEEEEECSSCSSTT--------------EECCCSSSCCHHHHTTEEEEEEE
T ss_pred CCCcEEEE-ccCCChHHHHHHHHhC---CCeEEEEECCccccc--------------eEEccCCCCcccccCCcCEEEEc
Confidence 35799999 99999 5899998642 568999999997765 77777766433334699999 56
Q ss_pred cCCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 118 DCNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 118 D~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
..+.+-....++.+.+. |--++|
T Consensus 97 rPP~El~~~i~~lA~~v---~adliI 119 (153)
T 2k4m_A 97 RPPAEIHSSLMRVADAV---GARLII 119 (153)
T ss_dssp SCCTTTHHHHHHHHHHH---TCEEEE
T ss_pred CCCHHHHHHHHHHHHHc---CCCEEE
Confidence 77776666666666653 344555
No 289
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.88 E-value=9.2e-05 Score=63.85 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=79.2
Q ss_pred CCCCeEEEEccccHHHHHHHHHH---HccCCCc--EEEEEeCChh---------HHHHHHHHhc----CCCC--cEEEEE
Q 041509 39 NNAQLMVVACANVANATTLALAA---AAHQTGG--RVVCILRRVE---------EYKLSKKILG----LDAS--HVEFVI 98 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~---a~~~~~g--~v~tiE~~~~---------~~~~Ar~~~~----~~~~--~V~~~~ 98 (211)
.+.=+|||+ |-|+|+.++.... ...+ .. +.+++|.+|- ..+..+..+. .... ..+++.
T Consensus 95 ~~~~~IlE~-GFGTGLNfl~t~~~~~~~~~-~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~ 172 (308)
T 3vyw_A 95 RKVIRILDV-GFGLGYNLAVALKHLWEVNP-KLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLL 172 (308)
T ss_dssp CSEEEEEEE-CCTTSHHHHHHHHHHHHHCT-TCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEE
T ss_pred CCCcEEEEe-CCCccHHHHHHHHHHHHhCC-CcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEe
Confidence 344569999 8999997654332 2222 34 4588886431 2222322222 1123 357899
Q ss_pred cchHHHhhhccC-CccEEEEcCCc--Cc----HHHHHHHHHhcCCCCcEEEEEecCCCCCce----ecCCCcEEEee-cC
Q 041509 99 GDAQSLLLSHFR-EADFVLIDCNL--EN----HEGVLRAVQAGNKPNGAVVVGYNAFRKGSW----RSSGSKSQLLP-IG 166 (211)
Q Consensus 99 gda~e~l~~l~~-~fD~VfiD~~~--~~----y~~~l~~~~~~L~pgG~viv~dn~~~~~~~----~~~~~~~v~lp-ig 166 (211)
||+.+.++++.+ .+|.+|+|+-. .+ -.++++.+.++++|||.++ ... ..|.. ...+|...-.| .|
T Consensus 173 GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la-TYt--aag~VRR~L~~aGF~V~k~~G~g 249 (308)
T 3vyw_A 173 GDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV-SYS--SSLSVRKSLLTLGFKVGSSREIG 249 (308)
T ss_dssp SCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE-ESC--CCHHHHHHHHHTTCEEEEEECC-
T ss_pred chHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE-EEe--CcHHHHHHHHHCCCEEEecCCCC
Confidence 999999998754 89999999722 12 2789999999999976544 231 23322 25667654443 22
Q ss_pred --CcEEEEEEe
Q 041509 167 --EGLLVTRIA 175 (211)
Q Consensus 167 --~Gl~v~~~~ 175 (211)
+.|+++.+.
T Consensus 250 ~KReml~A~~~ 260 (308)
T 3vyw_A 250 RKRKGTVASLK 260 (308)
T ss_dssp --CEEEEEESS
T ss_pred CCCceeEEecC
Confidence 356666543
No 290
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.88 E-value=3.2e-05 Score=67.52 Aligned_cols=83 Identities=12% Similarity=0.133 Sum_probs=66.6
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-----cCC
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-----FRE 111 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-----~~~ 111 (211)
...+...+||. .+|.|--|..|++.+.+ .|+|+++|.||++++.|+ .+. .+++++++++..++...+ .++
T Consensus 54 ~i~pggiyVD~-TlG~GGHS~~iL~~lg~-~GrVig~D~Dp~Al~~A~-rL~--~~Rv~lv~~nF~~l~~~L~~~g~~~~ 128 (347)
T 3tka_A 54 NIRPDGIYIDG-TFGRGGHSRLILSQLGE-EGRLLAIDRDPQAIAVAK-TID--DPRFSIIHGPFSALGEYVAERDLIGK 128 (347)
T ss_dssp CCCTTCEEEES-CCTTSHHHHHHHTTCCT-TCEEEEEESCHHHHHHHT-TCC--CTTEEEEESCGGGHHHHHHHTTCTTC
T ss_pred CCCCCCEEEEe-CcCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHH-hhc--CCcEEEEeCCHHHHHHHHHhcCCCCc
Confidence 44567889999 69999999999988754 799999999999999994 442 578999999987764433 136
Q ss_pred ccEEEEcCCcCcH
Q 041509 112 ADFVLIDCNLENH 124 (211)
Q Consensus 112 fD~VfiD~~~~~y 124 (211)
+|.|+.|...+-+
T Consensus 129 vDgILfDLGVSS~ 141 (347)
T 3tka_A 129 IDGILLDLGVSSP 141 (347)
T ss_dssp EEEEEEECSCCHH
T ss_pred ccEEEECCccCHH
Confidence 9999999876643
No 291
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.79 E-value=5.5e-05 Score=66.46 Aligned_cols=80 Identities=11% Similarity=0.005 Sum_probs=63.2
Q ss_pred CCc-CCChhHHHHHHHHHhhCC------CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCC
Q 041509 20 GQK-AKEPNEAEFISALAAGNN------AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDAS 92 (211)
Q Consensus 20 ~~~-~~~~~~~~lL~~l~~~~~------~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~ 92 (211)
+|. .+++...+-+...+...+ ...|||| |.|.|..|..|+.... ..+|++||+|+.++...++.+. .+
T Consensus 31 GQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEI-GPG~G~LT~~Ll~~~~--~~~vvavE~D~~l~~~L~~~~~--~~ 105 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDL-YPGVGIQSAIFYNKYC--PRQYSLLEKRSSLYKFLNAKFE--GS 105 (353)
T ss_dssp GCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEE-SCTTCHHHHHHHHHHC--CSEEEEECCCHHHHHHHHHHTT--TS
T ss_pred CcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEE-CCCCCHHHHHHHhhCC--CCEEEEEecCHHHHHHHHHhcc--CC
Confidence 444 467777776666655543 4789999 9999999999998642 4689999999999988888763 46
Q ss_pred cEEEEEcchHHH
Q 041509 93 HVEFVIGDAQSL 104 (211)
Q Consensus 93 ~V~~~~gda~e~ 104 (211)
+++++++|+.++
T Consensus 106 ~l~ii~~D~l~~ 117 (353)
T 1i4w_A 106 PLQILKRDPYDW 117 (353)
T ss_dssp SCEEECSCTTCH
T ss_pred CEEEEECCccch
Confidence 899999999765
No 292
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.77 E-value=0.00014 Score=67.11 Aligned_cols=129 Identities=9% Similarity=-0.048 Sum_probs=89.6
Q ss_pred CcCCChhHHHHHHHHHhhCCCCeEEEEccccHHHHHHHHHHHccCC-----------CcEEEEEeCChhHHHHHHHHhc-
Q 041509 21 QKAKEPNEAEFISALAAGNNAQLMVVACANVANATTLALAAAAHQT-----------GGRVVCILRRVEEYKLSKKILG- 88 (211)
Q Consensus 21 ~~~~~~~~~~lL~~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~-----------~g~v~tiE~~~~~~~~Ar~~~~- 88 (211)
+..-++.+.+++..++...+..+|+|- .||+|.+-+.....+... ...++++|+++.+..+|+.|+-
T Consensus 198 qfyTP~~Vv~lmv~l~~p~~~~~I~DP-acGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~l 276 (530)
T 3ufb_A 198 EFYTPRPVVRFMVEVMDPQLGESVLDP-ACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLL 276 (530)
T ss_dssp CCCCCHHHHHHHHHHHCCCTTCCEEET-TCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHH
T ss_pred eECCcHHHHHHHHHhhccCCCCEEEeC-CCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHh
Confidence 345677789999999988888899999 499998876666554332 2469999999999999999986
Q ss_pred -CCCCcEEEEEcchHHHh-hhc--cCCccEEEEcCCcC-------------------cHHHHHHHHHhcCC-------CC
Q 041509 89 -LDASHVEFVIGDAQSLL-LSH--FREADFVLIDCNLE-------------------NHEGVLRAVQAGNK-------PN 138 (211)
Q Consensus 89 -~~~~~V~~~~gda~e~l-~~l--~~~fD~VfiD~~~~-------------------~y~~~l~~~~~~L~-------pg 138 (211)
+. +.-.+.++|.+..- ... ..+||+|+.+.+.. .+..+++.+...|+ ||
T Consensus 277 hg~-~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~g 355 (530)
T 3ufb_A 277 HGL-EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNG 355 (530)
T ss_dssp HTC-SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSC
T ss_pred cCC-ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCC
Confidence 43 33467788886431 111 35899999986532 12345666766665 68
Q ss_pred cEEEEE--ecCCCCC
Q 041509 139 GAVVVG--YNAFRKG 151 (211)
Q Consensus 139 G~viv~--dn~~~~~ 151 (211)
|.+.++ +.++..+
T Consensus 356 Gr~avVlP~g~Lf~~ 370 (530)
T 3ufb_A 356 GRAAVVVPNGTLFSD 370 (530)
T ss_dssp CEEEEEEEHHHHHCC
T ss_pred ceEEEEecchhhhcc
Confidence 875433 4455443
No 293
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.45 E-value=0.00053 Score=60.59 Aligned_cols=72 Identities=13% Similarity=0.011 Sum_probs=55.7
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
..++.++||+ |++.|..|-.+++. +++|++||..|- ....+ ...+|+++.+|+.+..+. .+++|.|+.
T Consensus 209 l~~G~~vlDL-GAaPGGWT~~l~~r----g~~V~aVD~~~l-~~~l~-----~~~~V~~~~~d~~~~~~~-~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDL-GACPGGWTYQLVKR----NMWVYSVDNGPM-AQSLM-----DTGQVTWLREDGFKFRPT-RSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEE-TCTTCHHHHHHHHT----TCEEEEECSSCC-CHHHH-----TTTCEEEECSCTTTCCCC-SSCEEEEEE
T ss_pred CCCCCEEEEe-CcCCCHHHHHHHHC----CCEEEEEEhhhc-Chhhc-----cCCCeEEEeCccccccCC-CCCcCEEEE
Confidence 3567899999 99999999988763 789999997652 11111 136799999999887653 578999999
Q ss_pred cCCc
Q 041509 118 DCNL 121 (211)
Q Consensus 118 D~~~ 121 (211)
|...
T Consensus 277 Dm~~ 280 (375)
T 4auk_A 277 DMVE 280 (375)
T ss_dssp CCSS
T ss_pred cCCC
Confidence 9764
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.45 E-value=0.00037 Score=59.19 Aligned_cols=45 Identities=16% Similarity=0.068 Sum_probs=39.4
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG 88 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~ 88 (211)
.+...|||. +||+|.+++.++.. +.++++||+++++++.|+++++
T Consensus 234 ~~~~~vlD~-f~GsGt~~~~a~~~----g~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 234 FVGDVVLDP-FAGTGTTLIAAARW----GRRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp CTTCEEEET-TCTTTHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEEC-CCCCCHHHHHHHHc----CCeEEEEeCCHHHHHHHHHHHH
Confidence 567899999 89999988776642 6799999999999999999997
No 295
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.42 E-value=0.00041 Score=65.17 Aligned_cols=99 Identities=13% Similarity=0.128 Sum_probs=68.6
Q ss_pred CeEEEEccccHHHHHHHHHHHcc-------C-CC--cEEEEEeC---ChhHHHHHHH-----------Hhc-------C-
Q 041509 42 QLMVVACANVANATTLALAAAAH-------Q-TG--GRVVCILR---RVEEYKLSKK-----------ILG-------L- 89 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~-------~-~~--g~v~tiE~---~~~~~~~Ar~-----------~~~-------~- 89 (211)
=+|+|+ |-|+|+..+....+.. . .. -+++++|. +++-+..|-. .++ +
T Consensus 68 ~~i~e~-gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 68 FVVAES-GFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEE-CCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred eEEEEe-CCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 479999 8999998887766542 0 12 46899999 6655543322 111 0
Q ss_pred ----C---CCcEEEEEcchHHHhhhc----cCCccEEEEcCCc-----Cc-HHHHHHHHHhcCCCCcEE
Q 041509 90 ----D---ASHVEFVIGDAQSLLLSH----FREADFVLIDCNL-----EN-HEGVLRAVQAGNKPNGAV 141 (211)
Q Consensus 90 ----~---~~~V~~~~gda~e~l~~l----~~~fD~VfiD~~~-----~~-y~~~l~~~~~~L~pgG~v 141 (211)
+ .-.+++..||+.+.++++ ...||.+|+|+-. +. -.++++.+.++++|||.+
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~ 215 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTL 215 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEE
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEE
Confidence 0 134778999999999987 3689999999742 22 277899999999986544
No 296
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.18 E-value=0.00025 Score=60.21 Aligned_cols=121 Identities=10% Similarity=-0.092 Sum_probs=70.0
Q ss_pred CCChhHHHHHHHHHh--hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcc
Q 041509 23 AKEPNEAEFISALAA--GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGD 100 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~--~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gd 100 (211)
..++..-+|+...-+ ..+..+|||+ |||.|-.+-.++... ..+.++++|+.-++....+.. .....++..+.++
T Consensus 55 YrSRaA~KL~ei~ek~~l~~~~~VLDL-GaAPGGWSQvAa~~~--~~~~v~g~dVGvDl~~~pi~~-~~~g~~ii~~~~~ 130 (277)
T 3evf_A 55 AVSRGTAKLRWFHERGYVKLEGRVIDL-GCGRGGWCYYAAAQK--EVSGVKGFTLGRDGHEKPMNV-QSLGWNIITFKDK 130 (277)
T ss_dssp CSSTHHHHHHHHHHTTSSCCCEEEEEE-TCTTCHHHHHHHTST--TEEEEEEECCCCTTCCCCCCC-CBTTGGGEEEECS
T ss_pred ccccHHHHHHHHHHhCCCCCCCEEEEe-cCCCCHHHHHHHHhc--CCCcceeEEEeccCccccccc-CcCCCCeEEEecc
Confidence 344554455444332 3456689999 999999988877542 246788888764431101000 0011134445555
Q ss_pred hHHHhhhccCCccEEEEcCCcC----c---H--HHHHHHHHhcCCCC-cEEEEEecCCCC
Q 041509 101 AQSLLLSHFREADFVLIDCNLE----N---H--EGVLRAVQAGNKPN-GAVVVGYNAFRK 150 (211)
Q Consensus 101 a~e~l~~l~~~fD~VfiD~~~~----~---y--~~~l~~~~~~L~pg-G~viv~dn~~~~ 150 (211)
+. ...-..++||+|+.|.... . + ...++.+.+.|+|| |.+++ -++.+
T Consensus 131 ~d-v~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~--KVf~p 187 (277)
T 3evf_A 131 TD-IHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV--KVLAP 187 (277)
T ss_dssp CC-TTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE--EESCT
T ss_pred ce-ehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE--EecCC
Confidence 42 2221257899999997433 1 1 13456777889999 88776 56664
No 297
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.14 E-value=0.0009 Score=52.73 Aligned_cols=98 Identities=10% Similarity=0.017 Sum_probs=62.9
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~f 112 (211)
...+.++||.+ | .|+|..++.++... +.+|++++.+++..+.+++. +....+.....+..+.+.+. .+.+
T Consensus 35 ~~~~g~~vlV~-Ga~ggiG~~~~~~~~~~---G~~V~~~~~~~~~~~~~~~~--g~~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 35 RLSPGERVLIH-SATGGVGMAAVSIAKMI---GARIYTTAGSDAKREMLSRL--GVEYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CCCTTCEEEET-TTTSHHHHHHHHHHHHH---TCEEEEEESSHHHHHHHHTT--CCSEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCCCEEEEe-eCCChHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHc--CCCEEeeCCcHHHHHHHHHHhCCCCC
Confidence 34567889999 7 57788877777664 57999999999888777542 21111111112233333222 2469
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|.+|-... . ..++.+.+.|+|+|.++..
T Consensus 109 D~vi~~~g-~---~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 109 DVVLNSLA-G---EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp EEEEECCC-T---HHHHHHHHTEEEEEEEEEC
T ss_pred eEEEECCc-h---HHHHHHHHHhccCCEEEEE
Confidence 99986553 2 5678888889998877653
No 298
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.10 E-value=0.0012 Score=57.36 Aligned_cols=100 Identities=13% Similarity=0.047 Sum_probs=65.9
Q ss_pred hhCCCCeEEEEccccH-HHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccE
Q 041509 37 AGNNAQLMVVACANVA-NATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADF 114 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~-G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~ 114 (211)
...+.++||-+ |+|. |..++.+|++.. ..+|+++|.+++..+.|++. +...-+.....|..+.+.++ .+.+|+
T Consensus 187 ~~~~g~~VlV~-GaG~vG~~a~qlak~~G--a~~Vi~~~~~~~~~~~a~~l--Ga~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 187 KVTPASSFVTW-GAGAVGLSALLAAKVCG--ASIIIAVDIVESRLELAKQL--GATHVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CCCTTCEEEEE-SCSHHHHHHHHHHHHHT--CSEEEEEESCHHHHHHHHHH--TCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHcC--CCeEEEECCCHHHHHHHHHc--CCCEEecCCccCHHHHHHHhcCCCCcE
Confidence 44567899999 7764 888888988762 23799999999999998754 21111111112333333333 347999
Q ss_pred EEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 115 VLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 115 VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
||-.... ...++.+.+.|+++|.+++.
T Consensus 262 vid~~g~---~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTGS---PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEECSCC---HHHHHHHHHTEEEEEEEEEC
T ss_pred EEECCCC---HHHHHHHHHHHhcCCEEEEe
Confidence 8754432 25677888889998887764
No 299
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.09 E-value=0.0015 Score=57.66 Aligned_cols=96 Identities=11% Similarity=-0.094 Sum_probs=67.3
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhh-c------cCCccE
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLS-H------FREADF 114 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~-l------~~~fD~ 114 (211)
-+++|+| ||+|-.++.+..+- --.|.++|+++.+.+..+.|+. ...++++|+.++... + ...+|+
T Consensus 3 ~~vidLF-sG~GGlslG~~~aG---~~~v~avE~d~~a~~t~~~N~~----~~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLF-SGVGGLSLGAARAG---FDVKMAVEIDQHAINTHAINFP----RSLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEET-CTTSHHHHHHHHHT---CEEEEEECSCHHHHHHHHHHCT----TSEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEc-cCcCHHHHHHHHCC---CcEEEEEeCCHHHHHHHHHhCC----CCceEecChhhcCHHHHHhhcccCCCeeE
Confidence 4699995 99999888887762 3457899999999999999865 346778888766321 1 368999
Q ss_pred EEEcCC---------------cC-cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 115 VLIDCN---------------LE-NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 115 VfiD~~---------------~~-~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
|+.+.+ +. .+.++++.+.. ++| . +++.+|+-
T Consensus 75 i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~-~~P-~-~~v~ENV~ 121 (376)
T 3g7u_A 75 IIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSE-LQP-L-FFLAENVP 121 (376)
T ss_dssp EEECCCCCTTC-------CHHHHHHHHHHHHHHHH-HCC-S-EEEEEECT
T ss_pred EEecCCCCCcccccCCCCCCchHHHHHHHHHHHHH-hCC-C-EEEEecch
Confidence 999864 11 23445555543 577 3 55568863
No 300
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.08 E-value=0.0015 Score=55.96 Aligned_cols=99 Identities=15% Similarity=0.123 Sum_probs=66.8
Q ss_pred hhCCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 37 AGNNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
...+.++||-+ |+| +|..++.+|++. +.+|++++.+++..+.+++. +...-+.....|..+.+.+..+.+|.|
T Consensus 163 ~~~~g~~VlV~-GaG~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~l--Ga~~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 163 DTRPGQWVVIS-GIGGLGHVAVQYARAM---GLRVAAVDIDDAKLNLARRL--GAEVAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp TCCTTSEEEEE-CCSTTHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHT--TCSEEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHC---CCeEEEEeCCHHHHHHHHHc--CCCEEEeCCCcCHHHHHHHhCCCCCEE
Confidence 44677889989 765 599999999875 56999999999999988763 211111111123333333334589999
Q ss_pred EEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 116 LIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|...... +.++.+.+.|+|+|.+++.
T Consensus 237 id~~g~~---~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 237 LVTAVSP---KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EESSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred EEeCCCH---HHHHHHHHHhccCCEEEEe
Confidence 8665432 5677778888998887764
No 301
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.00 E-value=0.0074 Score=52.06 Aligned_cols=97 Identities=15% Similarity=0.086 Sum_probs=65.0
Q ss_pred HhhCCCCeEEEEcccc-HHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcEEEEEcc------hHHHhhh
Q 041509 36 AAGNNAQLMVVACANV-ANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHVEFVIGD------AQSLLLS 107 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gd------a~e~l~~ 107 (211)
+...+.++||-+ |+| +|..++.+|++. +. +|++++.+++..+.+++. + .+ .++..+ ..+.+..
T Consensus 167 ~~~~~g~~VlV~-GaG~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~l--G-a~--~vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 167 GGVTLGHKVLVC-GAGPIGMVTLLVAKAM---GAAQVVVTDLSATRLSKAKEI--G-AD--LVLQISKESPQEIARKVEG 237 (356)
T ss_dssp HTCCTTCEEEEE-CCSHHHHHHHHHHHHT---TCSEEEEEESCHHHHHHHHHT--T-CS--EEEECSSCCHHHHHHHHHH
T ss_pred cCCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHHh--C-CC--EEEcCcccccchHHHHHHH
Confidence 455678899999 765 488888888875 44 999999999998888753 2 12 222222 2222222
Q ss_pred c-cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 108 H-FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 108 l-~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
. .+.+|+||-.... ...++.+.+.|+|+|.++..
T Consensus 238 ~~~~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 238 QLGCKPEVTIECTGA---EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHTSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEEC
T ss_pred HhCCCCCEEEECCCC---hHHHHHHHHHhcCCCEEEEE
Confidence 2 3579999855443 24567778889999988764
No 302
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.98 E-value=0.0028 Score=54.44 Aligned_cols=125 Identities=13% Similarity=0.070 Sum_probs=79.6
Q ss_pred CCCeEEEEccc------cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCcc
Q 041509 40 NAQLMVVACAN------VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREAD 113 (211)
Q Consensus 40 ~~~~VLEi~Gt------g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD 113 (211)
...+|||+ |+ ..|. ..+.+-. +.++.|+++|++|-.. ..+ .++.||..+... .++||
T Consensus 109 ~gmrVLDL-GA~s~kg~APGS--~VLr~~~-p~g~~VVavDL~~~~s---------da~--~~IqGD~~~~~~--~~k~D 171 (344)
T 3r24_A 109 YNMRVIHF-GAGSDKGVAPGT--AVLRQWL-PTGTLLVDSDLNDFVS---------DAD--STLIGDCATVHT--ANKWD 171 (344)
T ss_dssp TTCEEEEE-SCCCTTSBCHHH--HHHHHHS-CTTCEEEEEESSCCBC---------SSS--EEEESCGGGEEE--SSCEE
T ss_pred CCCEEEeC-CCCCCCCCCCcH--HHHHHhC-CCCcEEEEeeCccccc---------CCC--eEEEcccccccc--CCCCC
Confidence 35789999 95 8887 2344444 3357999999987321 112 459999865432 58999
Q ss_pred EEEEcCCc------------Cc--HHHHHHHHHhcCCCCcEEEEEecCCCCCcee------cCCCcEEEeecCCcEEEEE
Q 041509 114 FVLIDCNL------------EN--HEGVLRAVQAGNKPNGAVVVGYNAFRKGSWR------SSGSKSQLLPIGEGLLVTR 173 (211)
Q Consensus 114 ~VfiD~~~------------~~--y~~~l~~~~~~L~pgG~viv~dn~~~~~~~~------~~~~~~v~lpig~Gl~v~~ 173 (211)
+|+.|... .. .+..++.+.+.|+|||.+++ . ++ .|.+. ...|..+. .
T Consensus 172 LVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvV-K-VF-QGsg~~~L~~lrk~F~~VK----------~ 238 (344)
T 3r24_A 172 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV-K-IT-EHSWNADLYKLMGHFSWWT----------A 238 (344)
T ss_dssp EEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE-E-EC-SSSCCHHHHHHHTTEEEEE----------E
T ss_pred EEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEE-E-Ee-cCCCHHHHHHHHhhCCeEE----------E
Confidence 99999422 11 25677778888999888876 4 33 33321 24555443 1
Q ss_pred EeccC-CCCccceEEeccccCC
Q 041509 174 IAAAS-ANKKSHWIVKVDKCTG 194 (211)
Q Consensus 174 ~~~~~-~~~~~~~~~~~~~~~~ 194 (211)
+++.+ .+..+.+++.......
T Consensus 239 fK~ASRa~SsEvYLVG~gfKg~ 260 (344)
T 3r24_A 239 FVTNVNASSSEAFLIGANYLGK 260 (344)
T ss_dssp EEEGGGTTSSCEEEEEEEECSS
T ss_pred ECCCCCCCCeeEEEEeeeccCC
Confidence 22333 5578888888776654
No 303
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.94 E-value=0.015 Score=50.18 Aligned_cols=99 Identities=19% Similarity=0.117 Sum_probs=67.3
Q ss_pred HhhCCCCeEEEEccc-cHHHHHHHHHHHccCCCcE-EEEEeCChhHHHHHHHHhcCCCCcEEEEE-----cchHHHhhhc
Q 041509 36 AAGNNAQLMVVACAN-VANATTLALAAAAHQTGGR-VVCILRRVEEYKLSKKILGLDASHVEFVI-----GDAQSLLLSH 108 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gt-g~G~stl~la~a~~~~~g~-v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~-----gda~e~l~~l 108 (211)
+...+.++||-+ |+ ++|..++.+|++. +.+ |++++.+++..+.|++. . ...+.... .|..+.+.++
T Consensus 175 ~~~~~g~~VlV~-GaG~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~l-~--~~~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 175 AGVRLGDPVLIC-GAGPIGLITMLCAKAA---GACPLVITDIDEGRLKFAKEI-C--PEVVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp HTCCTTCCEEEE-CCSHHHHHHHHHHHHT---TCCSEEEEESCHHHHHHHHHH-C--TTCEEEECCSCCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHHh-c--hhcccccccccchHHHHHHHHHH
Confidence 455678899999 65 4588888888875 455 99999999999999986 3 22233321 2333333333
Q ss_pred --cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 109 --FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 109 --~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
...+|+||-..... ..++.+.+.|+++|.+++.
T Consensus 248 t~g~g~Dvvid~~g~~---~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 248 FGGIEPAVALECTGVE---SSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp TSSCCCSEEEECSCCH---HHHHHHHHHSCTTCEEEEC
T ss_pred hCCCCCCEEEECCCCh---HHHHHHHHHhcCCCEEEEE
Confidence 34799998544432 4577778889999988764
No 304
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.81 E-value=0.0054 Score=53.21 Aligned_cols=74 Identities=11% Similarity=0.021 Sum_probs=55.5
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhh-cc-CCccEEEEc
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLS-HF-READFVLID 118 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~-l~-~~fD~VfiD 118 (211)
+.+|+|+ -||+|-.++.+..+-- ....|.++|+++.+.+..+.|+.. ..++++|+.++... +. ..+|+|+.+
T Consensus 2 ~~~v~dL-FaG~Gg~~~g~~~~G~-~~~~v~~~E~d~~a~~~~~~N~~~----~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 2 PLRVLEL-YSGVGGMHHALRESCI-PAQVVAAIDVNTVANEVYKYNFPH----TQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp CEEEEEE-TCTTCHHHHHHHHHTC-SEEEEEEECCCHHHHHHHHHHCTT----SCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CCeEEEe-CcCccHHHHHHHHCCC-CceEEEEEeCCHHHHHHHHHhccc----cccccCCHHHccHhHcCcCCcCEEEEc
Confidence 3579999 5999999888876520 013799999999999999999762 23678998876532 12 279999998
Q ss_pred CC
Q 041509 119 CN 120 (211)
Q Consensus 119 ~~ 120 (211)
.+
T Consensus 76 pP 77 (343)
T 1g55_A 76 PP 77 (343)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 305
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.75 E-value=0.0035 Score=55.05 Aligned_cols=103 Identities=15% Similarity=0.060 Sum_probs=66.4
Q ss_pred HhhCCCCeEEEEccccH-HHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcch-HHHhhhc-cC-C
Q 041509 36 AAGNNAQLMVVACANVA-NATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDA-QSLLLSH-FR-E 111 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg~-G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda-~e~l~~l-~~-~ 111 (211)
+...+.++||-+ |+|. |..++.+|++.. ..+|+++|.+++..+.|++. +. +.+.....|. .+.+..+ .+ .
T Consensus 181 ~~~~~g~~VlV~-GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l--Ga-~~i~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 181 AGVKPGSHVYIA-GAGPVGRCAAAGARLLG--AACVIVGDQNPERLKLLSDA--GF-ETIDLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp TTCCTTCEEEEE-CCSHHHHHHHHHHHHHT--CSEEEEEESCHHHHHHHHTT--TC-EEEETTSSSCHHHHHHHHHSSSC
T ss_pred cCCCCCCEEEEE-CCCHHHHHHHHHHHHcC--CCEEEEEcCCHHHHHHHHHc--CC-cEEcCCCcchHHHHHHHHhCCCC
Confidence 455678899999 7765 888888988762 24999999999998888742 22 2121112232 3333333 33 7
Q ss_pred ccEEEEcCCcCc-----------HHHHHHHHHhcCCCCcEEEEE
Q 041509 112 ADFVLIDCNLEN-----------HEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 112 fD~VfiD~~~~~-----------y~~~l~~~~~~L~pgG~viv~ 144 (211)
+|+||-...... ....++.+.+.|+++|.+++.
T Consensus 255 ~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 255 VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 999975443321 123577788888998887654
No 306
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.72 E-value=0.00043 Score=58.86 Aligned_cols=118 Identities=10% Similarity=-0.011 Sum_probs=69.3
Q ss_pred CChhHHHHHHHHH--hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCC-CcEEEEEc-
Q 041509 24 KEPNEAEFISALA--AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDA-SHVEFVIG- 99 (211)
Q Consensus 24 ~~~~~~~lL~~l~--~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~-~~V~~~~g- 99 (211)
.++..-+|+...- ...+..+|||+ ||+.|..+-.++... ....|+++|+...+...+... .... +-+.+..+
T Consensus 72 rSRAAfKL~ei~eK~~Lk~~~~VLDL-GaAPGGWsQvAa~~~--gv~sV~GvdvG~d~~~~pi~~-~~~g~~ii~~~~~~ 147 (282)
T 3gcz_A 72 VSRGSAKLRWMEERGYVKPTGIVVDL-GCGRGGWSYYAASLK--NVKKVMAFTLGVQGHEKPIMR-TTLGWNLIRFKDKT 147 (282)
T ss_dssp SSTHHHHHHHHHHTTSCCCCEEEEEE-TCTTCHHHHHHHTST--TEEEEEEECCCCTTSCCCCCC-CBTTGGGEEEECSC
T ss_pred ecHHHHHHHHHHHhcCCCCCCEEEEe-CCCCCHHHHHHHHhc--CCCeeeeEEeccCcccccccc-ccCCCceEEeeCCc
Confidence 4444444444332 23566689999 899999988877543 246789999876533222110 1112 22444333
Q ss_pred chHHHhhhccCCccEEEEcCCcC-------cH--HHHHHHHHhcCCCC--cEEEEEecCCCC
Q 041509 100 DAQSLLLSHFREADFVLIDCNLE-------NH--EGVLRAVQAGNKPN--GAVVVGYNAFRK 150 (211)
Q Consensus 100 da~e~l~~l~~~fD~VfiD~~~~-------~y--~~~l~~~~~~L~pg--G~viv~dn~~~~ 150 (211)
|..++ ..+++|+|+.|.... ++ ...++.+.+.|+|| |.+++ -++.+
T Consensus 148 dv~~l---~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~--KvF~p 204 (282)
T 3gcz_A 148 DVFNM---EVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCI--KVLCP 204 (282)
T ss_dssp CGGGS---CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE--EESCC
T ss_pred chhhc---CCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEE--EEecC
Confidence 33221 257999999997543 11 23466667789998 87765 45553
No 307
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.71 E-value=0.0034 Score=54.10 Aligned_cols=101 Identities=16% Similarity=0.082 Sum_probs=64.9
Q ss_pred HHhhCCCCeEEEEcccc-HHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cC
Q 041509 35 LAAGNNAQLMVVACANV-ANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FR 110 (211)
Q Consensus 35 l~~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~ 110 (211)
.+...+.++||-+ |+| .|..++.+|++. +. +|+++|.+++..+.+++. +...-+.....|..+.+.++ ..
T Consensus 161 ~~~~~~g~~VlV~-GaG~vG~~a~qla~~~---Ga~~Vi~~~~~~~~~~~~~~l--Ga~~vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 161 LANIKLGDTVCVI-GIGPVGLMSVAGANHL---GAGRIFAVGSRKHCCDIALEY--GATDIINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp HTTCCTTCCEEEE-CCSHHHHHHHHHHHTT---TCSSEEEECCCHHHHHHHHHH--TCCEEECGGGSCHHHHHHHHTTTC
T ss_pred hcCCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCcEEEEECCCHHHHHHHHHh--CCceEEcCCCcCHHHHHHHHcCCC
Confidence 3455678899999 765 488888888765 44 899999999999888764 21111111123344443333 23
Q ss_pred CccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 111 EADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 111 ~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.+|+||-..... ..++.+.+.|+|+|.++.+
T Consensus 235 g~D~v~d~~g~~---~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 235 GVDKVVIAGGDV---HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp CEEEEEECSSCT---THHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCCh---HHHHHHHHHHhcCCEEEEe
Confidence 799998544432 3566677778888887764
No 308
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.70 E-value=0.0063 Score=52.93 Aligned_cols=101 Identities=18% Similarity=0.201 Sum_probs=67.0
Q ss_pred HHhhCCCCeEEEEcccc-HHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhh---c-
Q 041509 35 LAAGNNAQLMVVACANV-ANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLS---H- 108 (211)
Q Consensus 35 l~~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~---l- 108 (211)
.+...+.++||-+ |+| +|..++.+|++. +. +|++++.+++..+.|++. |...-+.....|..+.+.+ +
T Consensus 177 ~~~~~~g~~VlV~-GaG~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~l--Ga~~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 177 LSGIKAGSTVAIL-GGGVIGLLTVQLARLA---GATTVILSTRQATKRRLAEEV--GATATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HHTCCTTCEEEEE-CCSHHHHHHHHHHHHT---TCSEEEEECSCHHHHHHHHHH--TCSEEECTTSSCHHHHHHSTTSSS
T ss_pred hcCCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHHc--CCCEEECCCCcCHHHHHHhhhhcc
Confidence 3456678899999 654 488888888875 44 999999999999988764 2111111112344444443 2
Q ss_pred cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 109 FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 109 ~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.+.+|+||-.... ...++.+.+.|+++|.++++
T Consensus 251 ~gg~Dvvid~~G~---~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 251 PGGVDVVIECAGV---AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTCEEEEEECSCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCCC---HHHHHHHHHHhccCCEEEEE
Confidence 3489998854432 24677778888998887764
No 309
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.64 E-value=0.0026 Score=56.57 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=45.9
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC----CC-CcEEEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL----DA-SHVEFVI 98 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~----~~-~~V~~~~ 98 (211)
.+...++|+ |+++|+.|++++.......++|+++|++|+..+..++|++. .. ++|+++.
T Consensus 225 ~~~~~viDv-GAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~ 288 (409)
T 2py6_A 225 SDSEKMVDC-GASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHG 288 (409)
T ss_dssp CSSCEEEEE-TCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEEC
T ss_pred CCCCEEEEC-CCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEE
Confidence 567889999 99999999998843322248999999999999999998862 13 5666553
No 310
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.63 E-value=0.023 Score=48.72 Aligned_cols=100 Identities=13% Similarity=0.091 Sum_probs=64.6
Q ss_pred HhhCCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEE-cchHHHhhhc-c---
Q 041509 36 AAGNNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVI-GDAQSLLLSH-F--- 109 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~-gda~e~l~~l-~--- 109 (211)
+...+.++||-+ |+| +|..++.+|++. +.+|++++.+++..+.+++. +...-+.... .+..+.+.+. .
T Consensus 164 ~~~~~g~~VlV~-GaG~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~l--Ga~~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 164 AGVQLGTTVLVI-GAGPIGLVSVLAAKAY---GAFVVCTARSPRRLEVAKNC--GADVTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp HTCCTTCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHT--TCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred cCCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCEEEEEcCCHHHHHHHHHh--CCCEEEcCcccccHHHHHHHHhcccc
Confidence 455678899999 655 588888888875 56799999999999888753 2111111110 2222222222 2
Q ss_pred -CCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 110 -READFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 110 -~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+.+|+||-.... ...++.+.+.|+|+|.++..
T Consensus 238 g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 238 GDLPNVTIDCSGN---EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp SSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEE
Confidence 579999855443 24567778888999987764
No 311
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.60 E-value=0.0052 Score=52.41 Aligned_cols=100 Identities=17% Similarity=0.178 Sum_probs=66.5
Q ss_pred HhhCCCCeEEEEccc--cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCc
Q 041509 36 AAGNNAQLMVVACAN--VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREA 112 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gt--g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~f 112 (211)
+...+.++||-+ |+ |+|..++.++.+. +.+|++++.+++..+.+.+.+. ...-+.....+..+.+.+. .+.+
T Consensus 145 ~~~~~g~~vlI~-Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 145 GQPKNGETVVIS-GAAGAVGSVAGQIARLK---GCRVVGIAGGAEKCRFLVEELG-FDGAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp TCCCTTCEEEES-STTSHHHHHHHHHHHHT---TCEEEEEESSHHHHHHHHHTTC-CSEEEETTTSCHHHHHHHHCTTCE
T ss_pred cCCCCCCEEEEE-CCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHcC-CCEEEECCCHHHHHHHHHhcCCCc
Confidence 455678899999 75 7888888888764 6799999999998888844333 1111111112333333332 4579
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|+||-.... ..++.+.+.|+++|.++++
T Consensus 220 d~vi~~~g~----~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 220 DVFFDNVGG----EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEESSCH----HHHHHHHTTEEEEEEEEEC
T ss_pred eEEEECCCc----chHHHHHHHHhhCCEEEEE
Confidence 988755442 4688888999998887764
No 312
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.60 E-value=0.018 Score=49.10 Aligned_cols=101 Identities=13% Similarity=0.066 Sum_probs=66.8
Q ss_pred HhhCCCCeEEEEccccH-HHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCc
Q 041509 36 AAGNNAQLMVVACANVA-NATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg~-G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~f 112 (211)
+...+.++||-+ |+|. |.+++.+++.+ .+.+|++++.+++..+.+++.-. ..-+.....|..+.+.++ ...+
T Consensus 159 ~~~~~g~~VlV~-GaG~~g~~a~~~a~~~--~g~~Vi~~~~~~~r~~~~~~~Ga--~~~i~~~~~~~~~~v~~~t~g~g~ 233 (348)
T 4eez_A 159 SGVKPGDWQVIF-GAGGLGNLAIQYAKNV--FGAKVIAVDINQDKLNLAKKIGA--DVTINSGDVNPVDEIKKITGGLGV 233 (348)
T ss_dssp HTCCTTCEEEEE-CCSHHHHHHHHHHHHT--SCCEEEEEESCHHHHHHHHHTTC--SEEEEC-CCCHHHHHHHHTTSSCE
T ss_pred cCCCCCCEEEEE-cCCCccHHHHHHHHHh--CCCEEEEEECcHHHhhhhhhcCC--eEEEeCCCCCHHHHhhhhcCCCCc
Confidence 345667889999 7664 45555555544 36899999999998888876422 223444445555555444 3467
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|.++.+.... ..++...+.|+++|.+++.
T Consensus 234 d~~~~~~~~~---~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 234 QSAIVCAVAR---IAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp EEEEECCSCH---HHHHHHHHTEEEEEEEEEC
T ss_pred eEEEEeccCc---chhheeheeecCCceEEEE
Confidence 8888776543 5677778889998887664
No 313
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.60 E-value=0.0055 Score=53.33 Aligned_cols=102 Identities=16% Similarity=0.054 Sum_probs=66.3
Q ss_pred HhhCCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEE--EcchHHHhhhc-cCC
Q 041509 36 AAGNNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFV--IGDAQSLLLSH-FRE 111 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~--~gda~e~l~~l-~~~ 111 (211)
+...+.++||-+ |+| +|..++.+|++.. ..+|+++|.+++..+.|++. +...-+... ..+..+.+.++ .+.
T Consensus 189 ~~~~~g~~VlV~-GaG~vG~~a~q~a~~~G--a~~Vi~~~~~~~~~~~a~~l--Ga~~vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 189 AKVEPGSNVAIF-GLGTVGLAVAEGAKTAG--ASRIIGIDIDSKKYETAKKF--GVNEFVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp TCCCTTCCEEEE-CCSHHHHHHHHHHHHHT--CSCEEEECSCTTHHHHHHTT--TCCEEECGGGCSSCHHHHHHHHTTSC
T ss_pred cCCCCCCEEEEE-CCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHc--CCcEEEccccCchhHHHHHHHhcCCC
Confidence 344567889999 654 6888888888762 24899999999999988753 211111111 12333444333 458
Q ss_pred ccEEEEcCCcCcHHHHHHHHHhcCCCC-cEEEEEe
Q 041509 112 ADFVLIDCNLENHEGVLRAVQAGNKPN-GAVVVGY 145 (211)
Q Consensus 112 fD~VfiD~~~~~y~~~l~~~~~~L~pg-G~viv~d 145 (211)
+|+||-.... ...++.+.+.|+++ |.++++-
T Consensus 264 ~D~vid~~g~---~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 264 VDYSFECIGN---VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp BSEEEECSCC---HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCEEEECCCC---HHHHHHHHHHhhccCCEEEEEc
Confidence 9999854443 35678888899996 8776643
No 314
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.59 E-value=0.008 Score=52.11 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=64.5
Q ss_pred hhCCCCeEEEEcccc-HHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcE-EEEE--cchHHHhhhc-cC
Q 041509 37 AGNNAQLMVVACANV-ANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHV-EFVI--GDAQSLLLSH-FR 110 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V-~~~~--gda~e~l~~l-~~ 110 (211)
...+.++||-+ |+| +|..++.+|++. +. +|++++.+++..+.+++. +. +.+ .... .+..+.+.++ .+
T Consensus 189 ~~~~g~~VlV~-GaG~vG~~a~qla~~~---Ga~~Vi~~~~~~~~~~~~~~l--Ga-~~vi~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 189 KVEPGSTCAVF-GLGAVGLAAVMGCHSA---GAKRIIAVDLNPDKFEKAKVF--GA-TDFVNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp CCCTTCEEEEE-CCSHHHHHHHHHHHHT---TCSEEEEECSCGGGHHHHHHT--TC-CEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCCEEEEEcCCHHHHHHHHHh--CC-ceEEeccccchhHHHHHHHHhCC
Confidence 34567889999 654 588888888875 45 899999999999988753 21 211 1100 1233333332 35
Q ss_pred CccEEEEcCCcCcHHHHHHHHHhcCCCC-cEEEEE
Q 041509 111 EADFVLIDCNLENHEGVLRAVQAGNKPN-GAVVVG 144 (211)
Q Consensus 111 ~fD~VfiD~~~~~y~~~l~~~~~~L~pg-G~viv~ 144 (211)
.+|+||-.... ...++.+.+.|+++ |.+++.
T Consensus 262 g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 262 GVDFSLECVGN---VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp CBSEEEECSCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEECCCC---HHHHHHHHHHhhcCCcEEEEE
Confidence 89999854433 24678888899998 887764
No 315
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.56 E-value=0.019 Score=48.94 Aligned_cols=102 Identities=14% Similarity=0.102 Sum_probs=65.9
Q ss_pred HHhhCCCCeEEEEccc-cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCC
Q 041509 35 LAAGNNAQLMVVACAN-VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FRE 111 (211)
Q Consensus 35 l~~~~~~~~VLEi~Gt-g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~ 111 (211)
.+...+.++||-. |+ +.|..++.+|+++. ...+++++.+++..+.|++. |....+.....|..+....+ ...
T Consensus 155 ~~~~~~g~~VlV~-GaG~vG~~aiq~ak~~G--~~~vi~~~~~~~k~~~a~~l--Ga~~~i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 155 LAQGCENKNVIII-GAGTIGLLAIQCAVALG--AKSVTAIDISSEKLALAKSF--GAMQTFNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp HTTCCTTSEEEEE-CCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHT--TCSEEEETTTSCHHHHHHHHGGGCS
T ss_pred HhccCCCCEEEEE-CCCCcchHHHHHHHHcC--CcEEEEEechHHHHHHHHHc--CCeEEEeCCCCCHHHHHHhhcccCC
Confidence 3455678899988 65 46777777887763 35789999999999988764 21222222223444444333 356
Q ss_pred ccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 112 ADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 112 fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+|+||-.... ...++.+.++|+++|.+++.
T Consensus 230 ~d~v~d~~G~---~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 230 NQLILETAGV---PQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp SEEEEECSCS---HHHHHHHHHHCCTTCEEEEC
T ss_pred cccccccccc---cchhhhhhheecCCeEEEEE
Confidence 7877654443 25677778889998887763
No 316
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.53 E-value=0.018 Score=50.09 Aligned_cols=96 Identities=19% Similarity=0.206 Sum_probs=63.9
Q ss_pred hhCCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 37 AGNNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
...+.++||-+ |+| +|..++.+|++. +.+|++++.+++..+.+++. . .+. ++.-+-.+.+..+.+.+|+|
T Consensus 191 ~~~~g~~VlV~-GaG~vG~~aiqlak~~---Ga~Vi~~~~~~~~~~~a~~l-G--a~~--vi~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 191 QAGPGKKVGVV-GIGGLGHMGIKLAHAM---GAHVVAFTTSEAKREAAKAL-G--ADE--VVNSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp TCCTTCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHH-T--CSE--EEETTCHHHHHTTTTCEEEE
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHc-C--CcE--EeccccHHHHHHhhcCCCEE
Confidence 45667899999 765 588888888875 56899999999999988762 2 121 22222223333334689999
Q ss_pred EEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 116 LIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|-..... ..++.+.+.|+|+|.++..
T Consensus 262 id~~g~~---~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 262 LNTVAAP---HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EECCSSC---CCHHHHHTTEEEEEEEEEC
T ss_pred EECCCCH---HHHHHHHHHhccCCEEEEe
Confidence 8554433 2356667788888877654
No 317
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.52 E-value=0.0055 Score=52.19 Aligned_cols=98 Identities=15% Similarity=0.132 Sum_probs=64.0
Q ss_pred hhCCCCeEEEEccc--cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEE-cchHHHhhhc-cCCc
Q 041509 37 AGNNAQLMVVACAN--VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVI-GDAQSLLLSH-FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~Gt--g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~-gda~e~l~~l-~~~f 112 (211)
...+.++||-+ |+ |+|..++.++.+. +.+|++++.+++..+.+++ +. ....+.... .+..+.+... .+.+
T Consensus 142 ~~~~g~~vlV~-Ga~ggiG~~~~~~~~~~---G~~V~~~~~~~~~~~~~~~-~g-~~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 142 GVKGGETVLVS-AAAGAVGSVVGQIAKLK---GCKVVGAAGSDEKIAYLKQ-IG-FDAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CCCSSCEEEEE-STTBHHHHHHHHHHHHT---TCEEEEEESSHHHHHHHHH-TT-CSEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCCCEEEEe-cCCCcHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-cC-CcEEEecCCHHHHHHHHHHHhCCCC
Confidence 44567889999 75 7888777777664 6799999999998888843 32 111111111 2333333322 3579
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|++|-.+.. ..++.+.+.|+++|.+++.
T Consensus 216 d~vi~~~g~----~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 216 DCYFDNVGG----EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EEEEESSCH----HHHHHHHTTEEEEEEEEEC
T ss_pred eEEEECCCh----HHHHHHHHHHhcCCEEEEE
Confidence 999866553 3578888899998887764
No 318
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.50 E-value=0.0087 Score=51.88 Aligned_cols=98 Identities=9% Similarity=0.021 Sum_probs=64.8
Q ss_pred hhCCCCeEEEEcccc-HHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcE-EEEE--cchHHHhhhc-cC
Q 041509 37 AGNNAQLMVVACANV-ANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHV-EFVI--GDAQSLLLSH-FR 110 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V-~~~~--gda~e~l~~l-~~ 110 (211)
...+.++||-+ |+| +|..++.+|+++ +. +|++++.+++..+.|++. +. +.+ .... .+..+.+.++ .+
T Consensus 188 ~~~~g~~VlV~-GaG~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~l--Ga-~~vi~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 188 KVTPGSTCAVF-GLGGVGFSAIVGCKAA---GASRIIGVGTHKDKFPKAIEL--GA-TECLNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp CCCTTCEEEEE-CCSHHHHHHHHHHHHH---TCSEEEEECSCGGGHHHHHHT--TC-SEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCCeEEEECCCHHHHHHHHHc--CC-cEEEecccccchHHHHHHHHhCC
Confidence 44567899999 654 588888888876 44 899999999999988753 21 211 1100 1233333333 34
Q ss_pred CccEEEEcCCcCcHHHHHHHHHhcCCCC-cEEEEE
Q 041509 111 EADFVLIDCNLENHEGVLRAVQAGNKPN-GAVVVG 144 (211)
Q Consensus 111 ~fD~VfiD~~~~~y~~~l~~~~~~L~pg-G~viv~ 144 (211)
.+|+||-.... ...++.+.+.|+++ |.++..
T Consensus 261 g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 261 GVDYAVECAGR---IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp CBSEEEECSCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCCEEEECCCC---HHHHHHHHHHHhcCCCEEEEE
Confidence 89999854432 35678888899998 887764
No 319
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.49 E-value=0.0072 Score=52.34 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=66.1
Q ss_pred HhhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcE-EEEEcchHHHhhhc-cCC
Q 041509 36 AAGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHV-EFVIGDAQSLLLSH-FRE 111 (211)
Q Consensus 36 ~~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V-~~~~gda~e~l~~l-~~~ 111 (211)
+...+.++||-+ | .++|..++.+|.+. +.+|++++.+++..+.+++ +. .+.+ .....+..+.+... .+.
T Consensus 159 ~~~~~g~~VlV~-Ga~G~iG~~~~q~a~~~---Ga~Vi~~~~~~~~~~~~~~-~G--a~~~~~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 159 GGLSEGKKVLVT-AAAGGTGQFAMQLSKKA---KCHVIGTCSSDEKSAFLKS-LG--CDRPINYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp TCCCTTCEEEET-TTTBTTHHHHHHHHHHT---TCEEEEEESSHHHHHHHHH-TT--CSEEEETTTSCHHHHHHHHCTTC
T ss_pred cCCCCCCEEEEe-CCCcHHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHH-cC--CcEEEecCChhHHHHHHHhcCCC
Confidence 455678899999 7 68899888888875 5699999999998888876 22 1211 11112333333332 357
Q ss_pred ccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 112 ADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 112 fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+|+||-.... ..++.+.+.|+++|.+++.
T Consensus 232 ~D~vid~~g~----~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 232 VDVVYESVGG----AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEEEEECSCT----HHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCH----HHHHHHHHHHhcCCEEEEE
Confidence 9999855443 4677788888888877664
No 320
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.48 E-value=0.011 Score=51.22 Aligned_cols=99 Identities=14% Similarity=0.090 Sum_probs=64.4
Q ss_pred hhCCCCeEEEEcccc-HHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcEEEEE--cchHHHhhhc-cCC
Q 041509 37 AGNNAQLMVVACANV-ANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHVEFVI--GDAQSLLLSH-FRE 111 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~--gda~e~l~~l-~~~ 111 (211)
...+.++||-+ |+| +|..++.+|++. +. +|++++.+++..+.+++. +...-+.... .+..+.+.++ .+.
T Consensus 187 ~~~~g~~VlV~-GaG~vG~~avqla~~~---Ga~~Vi~~~~~~~~~~~~~~l--Ga~~vi~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 187 KLEPGSVCAVF-GLGGVGLAVIMGCKVA---GASRIIGVDINKDKFARAKEF--GATECINPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp CCCTTCEEEEE-CCSHHHHHHHHHHHHH---TCSEEEEECSCGGGHHHHHHH--TCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCCeEEEEcCCHHHHHHHHHc--CCceEeccccccccHHHHHHHHhCCC
Confidence 34567889999 654 588888888876 44 899999999999988753 2111111100 1233333333 348
Q ss_pred ccEEEEcCCcCcHHHHHHHHHhcCCCC-cEEEEE
Q 041509 112 ADFVLIDCNLENHEGVLRAVQAGNKPN-GAVVVG 144 (211)
Q Consensus 112 fD~VfiD~~~~~y~~~l~~~~~~L~pg-G~viv~ 144 (211)
+|+||-.... ...++.+.+.|+++ |.+++.
T Consensus 261 ~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 261 VDYSFECIGN---VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp BSEEEECSCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCEEEECCCc---HHHHHHHHHhhccCCcEEEEE
Confidence 9999854433 24677888899998 887764
No 321
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.48 E-value=0.011 Score=51.85 Aligned_cols=101 Identities=12% Similarity=0.057 Sum_probs=62.2
Q ss_pred hCCCCeEEEEccc-cHHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCcc
Q 041509 38 GNNAQLMVVACAN-VANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREAD 113 (211)
Q Consensus 38 ~~~~~~VLEi~Gt-g~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~fD 113 (211)
..+.++||-+ |+ ++|..++.+|++. +. +|++++.+++..+.|++. |...-+.....|..+.+.++ ...+|
T Consensus 211 ~~~g~~VlV~-GaG~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~~~~l--Ga~~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 211 IRPGDNVVIL-GGGPIGLAAVAILKHA---GASKVILSEPSEVRRNLAKEL--GADHVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CCTTCEEEEE-CCSHHHHHHHHHHHHT---TCSEEEEECSCHHHHHHHHHH--TCSEEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCCEEEEE-CCCHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHHc--CCCEEEcCCCCCHHHHHHHHhCCCCCC
Confidence 4567889989 64 4588888888875 44 999999999999998764 21111111113444444333 33799
Q ss_pred EEEEcCCcC--cHHHHHHHHHhcCCCCcEEEEE
Q 041509 114 FVLIDCNLE--NHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 114 ~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+||-..... .+...++.+.+.++++|.++++
T Consensus 285 ~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 285 LFLEATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred EEEECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 998544433 2233444443555999988764
No 322
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.47 E-value=0.014 Score=49.95 Aligned_cols=99 Identities=13% Similarity=0.030 Sum_probs=65.6
Q ss_pred hhCCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCcc
Q 041509 37 AGNNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREAD 113 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~fD 113 (211)
...+.++||-+ |+| +|..++.+|++.. +.+|+++|.+++..+.+++. | .+.+--...+..+.+.++ ...+|
T Consensus 168 ~~~~g~~vlv~-GaG~vG~~a~qla~~~g--~~~Vi~~~~~~~~~~~~~~l--G-a~~~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 168 LLGPGSTAVVI-GVGGLGHVGIQILRAVS--AARVIAVDLDDDRLALAREV--G-ADAAVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp GCCTTCEEEEE-CCSHHHHHHHHHHHHHC--CCEEEEEESCHHHHHHHHHT--T-CSEEEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHcC--CCEEEEEcCCHHHHHHHHHc--C-CCEEEcCCCcHHHHHHHHhCCCCCe
Confidence 45677889999 654 4888888888762 57999999999999988763 2 122111112333333333 34899
Q ss_pred EEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 114 FVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 114 ~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+||-.... ...++.+.+.|+++|.++++
T Consensus 242 ~v~d~~G~---~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 242 AVFDFVGA---QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEESSCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC---HHHHHHHHHHHhcCCEEEEE
Confidence 98854443 24677778888898887764
No 323
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.46 E-value=0.01 Score=51.50 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=64.4
Q ss_pred hhCCCCeEEEEcccc-HHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcE-EEEE--cchHHHhhhc-cC
Q 041509 37 AGNNAQLMVVACANV-ANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHV-EFVI--GDAQSLLLSH-FR 110 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V-~~~~--gda~e~l~~l-~~ 110 (211)
...+.++||-+ |+| +|..++.+|+++ +. +|++++.+++..+.|++. +. +.+ .... .+..+.+.++ .+
T Consensus 192 ~~~~g~~VlV~-GaG~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~l--Ga-~~vi~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 192 KVTPGSTCAVF-GLGCVGLSAIIGCKIA---GASRIIAIDINGEKFPKAKAL--GA-TDCLNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp CCCTTCEEEEE-CCSHHHHHHHHHHHHT---TCSEEEEECSCGGGHHHHHHT--TC-SEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCCeEEEEcCCHHHHHHHHHh--CC-cEEEccccccchHHHHHHHHhCC
Confidence 34567889999 654 588888888875 44 899999999999988753 21 211 1100 1233333332 34
Q ss_pred CccEEEEcCCcCcHHHHHHHHHhcCCCC-cEEEEE
Q 041509 111 EADFVLIDCNLENHEGVLRAVQAGNKPN-GAVVVG 144 (211)
Q Consensus 111 ~fD~VfiD~~~~~y~~~l~~~~~~L~pg-G~viv~ 144 (211)
.+|+||-.... ...++.+.+.|+++ |.+++.
T Consensus 265 g~Dvvid~~G~---~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 265 GVDYSLDCAGT---AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp CBSEEEESSCC---HHHHHHHHHTBCTTTCEEEEC
T ss_pred CccEEEECCCC---HHHHHHHHHHhhcCCCEEEEE
Confidence 89999854432 25678888899998 887764
No 324
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.45 E-value=0.0046 Score=52.64 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=65.7
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~f 112 (211)
...+.++||-+ | .++|..++.++++. +.+|++++.+++..+.+++. +...-+.....+..+.+.++ ...+
T Consensus 137 ~~~~g~~VlV~-Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~~--Ga~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 137 QVKPGEIILFH-AAAGGVGSLACQWAKAL---GAKLIGTVSSPEKAAHAKAL--GAWETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CCCTTCEEEES-STTSHHHHHHHHHHHHH---TCEEEEEESSHHHHHHHHHH--TCSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCCCEEEEE-cCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHc--CCCEEEeCCCccHHHHHHHHhCCCCc
Confidence 34567889998 6 57888888888875 57999999999999888753 21111111112333333333 3479
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
|+||-.... +.++.+.+.|+++|.+++.-
T Consensus 211 Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQ----DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCG----GGHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh----HHHHHHHHHhcCCCEEEEEe
Confidence 988755443 45677788899988877643
No 325
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.43 E-value=0.01 Score=51.50 Aligned_cols=98 Identities=12% Similarity=0.062 Sum_probs=63.6
Q ss_pred hhCCCCeEEEEcccc-HHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcE-EEEE--cchHHHhhhc-cC
Q 041509 37 AGNNAQLMVVACANV-ANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHV-EFVI--GDAQSLLLSH-FR 110 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V-~~~~--gda~e~l~~l-~~ 110 (211)
...+.++||-+ |+| +|..++.+|++. +. +|++++.+++..+.+++. +. +.+ .... .+..+.+.++ .+
T Consensus 188 ~~~~g~~VlV~-GaG~vG~~a~qla~~~---Ga~~Vi~~~~~~~~~~~~~~l--Ga-~~vi~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 188 KVTQGSTCAVF-GLGGVGLSVIMGCKAA---GAARIIGVDINKDKFAKAKEV--GA-TECVNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp CCCTTCEEEEE-CCSHHHHHHHHHHHHT---TCSEEEEECSCGGGHHHHHHT--TC-SEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCCeEEEEcCCHHHHHHHHHh--CC-ceEecccccchhHHHHHHHHhCC
Confidence 34567889999 654 488888888875 44 899999999999988742 21 211 1100 1233333333 34
Q ss_pred CccEEEEcCCcCcHHHHHHHHHhcCCCC-cEEEEE
Q 041509 111 EADFVLIDCNLENHEGVLRAVQAGNKPN-GAVVVG 144 (211)
Q Consensus 111 ~fD~VfiD~~~~~y~~~l~~~~~~L~pg-G~viv~ 144 (211)
.+|+||-.... ...++.+.+.|+++ |.+++.
T Consensus 261 g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 261 GVDFSFEVIGR---LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp CBSEEEECSCC---HHHHHHHHHHBCTTTCEEEEC
T ss_pred CCcEEEECCCC---HHHHHHHHHHhhcCCcEEEEe
Confidence 89999754433 24577778888998 887653
No 326
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.41 E-value=0.0045 Score=52.84 Aligned_cols=99 Identities=14% Similarity=0.090 Sum_probs=64.7
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~f 112 (211)
...+.++||-+ | .+.|..++.++++. +.+|++++.+++..+.+++. . ...-+.....+..+.+.+. ...+
T Consensus 145 ~~~~g~~vlV~-Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~~-g-a~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 145 HVKKGDYVLLF-AAAGGVGLILNQLLKMK---GAHTIAVASTDEKLKIAKEY-G-AEYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CCCTTCEEEES-STTBHHHHHHHHHHHHT---TCEEEEEESSHHHHHHHHHT-T-CSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred cCCCCCEEEEE-CCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHc-C-CcEEEeCCCchHHHHHHHHhCCCCc
Confidence 34567889999 6 57888888888775 67999999999988888763 2 1111111112333333333 3479
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
|+||-.... ..++.+.+.|+++|.++.+-
T Consensus 219 D~vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVGK----DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCGG----GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCh----HHHHHHHHHhccCCEEEEEc
Confidence 998855543 45667777888888877643
No 327
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.38 E-value=0.0033 Score=53.76 Aligned_cols=117 Identities=12% Similarity=-0.038 Sum_probs=67.3
Q ss_pred CChhHHHHHHHHHh--hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCC-CcEEEEEc-
Q 041509 24 KEPNEAEFISALAA--GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDA-SHVEFVIG- 99 (211)
Q Consensus 24 ~~~~~~~lL~~l~~--~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~-~~V~~~~g- 99 (211)
.++..-+|+...-+ ..+.++|||+ ||+.|-++-.+++..+ ...|+++|+...+....+. ..... +-+.+..+
T Consensus 63 rSRaa~KL~ei~ek~l~~~g~~vlDL-GaaPGgWsqva~~~~g--v~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~ 138 (300)
T 3eld_A 63 VSRGAAKIRWLHERGYLRITGRVLDL-GCGRGGWSYYAAAQKE--VMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKS 138 (300)
T ss_dssp SSTTHHHHHHHHHHTSCCCCEEEEEE-TCTTCHHHHHHHTSTT--EEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSC
T ss_pred cchHHHHHHHHHHhCCCCCCCEEEEc-CCCCCHHHHHHHHhcC--CceeeeEEecccccccccc-ccccCCceEEeecCc
Confidence 44444444433322 2356789999 8999999998886432 3578899986532111000 00011 22444433
Q ss_pred chHHHhhhccCCccEEEEcCCcC-------cH--HHHHHHHHhcCCCC-cEEEEEecCCC
Q 041509 100 DAQSLLLSHFREADFVLIDCNLE-------NH--EGVLRAVQAGNKPN-GAVVVGYNAFR 149 (211)
Q Consensus 100 da~e~l~~l~~~fD~VfiD~~~~-------~y--~~~l~~~~~~L~pg-G~viv~dn~~~ 149 (211)
|..++ ..+++|+|+.|.... ++ ...++.+...|+|| |.+++ . +|.
T Consensus 139 di~~l---~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~-K-vF~ 193 (300)
T 3eld_A 139 NVFTM---PTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCV-K-VLA 193 (300)
T ss_dssp CTTTS---CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEE-E-ESS
T ss_pred eeeec---CCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEE-E-ecc
Confidence 22211 156899999997543 11 34467777889998 87766 3 555
No 328
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.36 E-value=0.0019 Score=54.33 Aligned_cols=101 Identities=11% Similarity=-0.068 Sum_probs=62.8
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHH--ccCCCcEEEEEeC--ChhHHHHHHHHhcCCCCcEEEEEc-chHHHhhhccCCc
Q 041509 38 GNNAQLMVVACANVANATTLALAAA--AHQTGGRVVCILR--RVEEYKLSKKILGLDASHVEFVIG-DAQSLLLSHFREA 112 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a--~~~~~g~v~tiE~--~~~~~~~Ar~~~~~~~~~V~~~~g-da~e~l~~l~~~f 112 (211)
..+..+|||+ ||+.|-.+.++++. .....|.++++|. .|-.. .....+-++|+.| |..+. . ..++
T Consensus 71 ikpg~~VVDL-GaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~------~~~Gv~~i~~~~G~Df~~~-~--~~~~ 140 (269)
T 2px2_A 71 VQPIGKVVDL-GCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM------QSYGWNIVTMKSGVDVFYK-P--SEIS 140 (269)
T ss_dssp CCCCEEEEEE-TCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC------CSTTGGGEEEECSCCGGGS-C--CCCC
T ss_pred CCCCCEEEEc-CCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc------cCCCceEEEeeccCCccCC-C--CCCC
Confidence 3457789999 99999999888875 2111356666662 22100 0000133567668 99863 2 4589
Q ss_pred cEEEEcCCcC------cH---HHHHHHHHhcCCCCc-EEEEEecCCCC
Q 041509 113 DFVLIDCNLE------NH---EGVLRAVQAGNKPNG-AVVVGYNAFRK 150 (211)
Q Consensus 113 D~VfiD~~~~------~y---~~~l~~~~~~L~pgG-~viv~dn~~~~ 150 (211)
|+|+.|.... +. ...++.+.+.|+||| .+++ =+|.+
T Consensus 141 DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fvv--KVFqg 186 (269)
T 2px2_A 141 DTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCI--KILCP 186 (269)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE--EESCT
T ss_pred CEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEE--EECCC
Confidence 9999996432 11 225777778899998 6665 45554
No 329
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.0096 Score=51.09 Aligned_cols=99 Identities=18% Similarity=0.106 Sum_probs=64.6
Q ss_pred hhCCCCeEEEEccc--cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEE-EcchHHHhhhc-cCCc
Q 041509 37 AGNNAQLMVVACAN--VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFV-IGDAQSLLLSH-FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~Gt--g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~-~gda~e~l~~l-~~~f 112 (211)
...+.++||-+ |+ |+|..++.++.+. +.+|++++.+++..+.+++. +....+... ..+..+.+.+. .+.+
T Consensus 166 ~~~~g~~vlV~-Ga~ggiG~~~~~~a~~~---Ga~V~~~~~~~~~~~~~~~~--g~~~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 166 NLMAGHWVAIS-GAAGGLGSLAVQYAKAM---GYRVLGIDGGEGKEELFRSI--GGEVFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp TCCTTCEEEEE-TTTSHHHHHHHHHHHHT---TCEEEEEECSTTHHHHHHHT--TCCEEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCCCEEEEE-CCCchHHHHHHHHHHHC---CCcEEEEcCCHHHHHHHHHc--CCceEEecCccHhHHHHHHHHhCCCC
Confidence 34567889999 76 6888888887764 67999999999888877652 211111111 12333333322 2379
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|+||-.... ...++.+.+.|+++|.++..
T Consensus 240 D~vi~~~g~---~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 240 HGVINVSVS---EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EEEEECSSC---HHHHHHHTTSEEEEEEEEEC
T ss_pred CEEEECCCc---HHHHHHHHHHHhcCCEEEEE
Confidence 999866543 25678888899998887654
No 330
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.33 E-value=0.0053 Score=52.59 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=63.6
Q ss_pred HhhCCCCeEEEEccc--cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCC
Q 041509 36 AAGNNAQLMVVACAN--VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FRE 111 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gt--g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~ 111 (211)
+...+.++||-+ |+ ++|..++.++++. +.+|++++.+++..+.+++. . ...-+.....+..+.+.++ ...
T Consensus 140 ~~~~~g~~VlV~-Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~l-g-a~~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 140 LNLQRNDVLLVN-ACGSAIGHLFAQLSQIL---NFRLIAVTRNNKHTEELLRL-G-AAYVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp SCCCTTCEEEES-STTSHHHHHHHHHHHHH---TCEEEEEESSSTTHHHHHHH-T-CSEEEETTTSCHHHHHHHHTTTSC
T ss_pred cccCCCCEEEEe-CCccHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHhC-C-CcEEEeCCcccHHHHHHHHhCCCC
Confidence 345667899999 65 5888888888875 67999999999999888863 2 1111111112333333333 347
Q ss_pred ccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 112 ADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 112 fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+|+||-...... .....+.|+++|.++.+-
T Consensus 214 ~Dvvid~~g~~~----~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 214 ADAAIDSIGGPD----GNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEEESSCHHH----HHHHHHTEEEEEEEEECC
T ss_pred CcEEEECCCChh----HHHHHHHhcCCCEEEEEe
Confidence 998875544322 233447889988877643
No 331
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.31 E-value=0.026 Score=48.67 Aligned_cols=95 Identities=16% Similarity=0.057 Sum_probs=67.3
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCC
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCN 120 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~ 120 (211)
..+++|+ .||+|-.++.+..+- ...+.++|+|+.+.+..+.|+.... ++|+.++.......+|+|+.+.+
T Consensus 11 ~~~~~dL-FaG~Gg~~~g~~~aG---~~~v~~~e~d~~a~~t~~~N~~~~~------~~Di~~~~~~~~~~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDL-FAGLGGFRLALESCG---AECVYSNEWDKYAQEVYEMNFGEKP------EGDITQVNEKTIPDHDILCAGFP 80 (327)
T ss_dssp TCEEEEE-TCTTTHHHHHHHHTT---CEEEEEECCCHHHHHHHHHHHSCCC------BSCGGGSCGGGSCCCSEEEEECC
T ss_pred CCcEEEE-CCCcCHHHHHHHHCC---CeEEEEEeCCHHHHHHHHHHcCCCC------cCCHHHcCHhhCCCCCEEEECCC
Confidence 4679999 599998888877642 3568999999999999999987321 68888876544457999998731
Q ss_pred ---------------cC--cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 121 ---------------LE--NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 121 ---------------~~--~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
.+ .+.++++.+.. ++| - +++.+|+-
T Consensus 81 CQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~-~~P-~-~~~~ENV~ 122 (327)
T 2c7p_A 81 CQAFSISGKQKGFEDSRGTLFFDIARIVRE-KKP-K-VVFMENVK 122 (327)
T ss_dssp CTTTCTTSCCCGGGSTTSCHHHHHHHHHHH-HCC-S-EEEEEEEG
T ss_pred CCCcchhcccCCCcchhhHHHHHHHHHHHh-ccC-c-EEEEeCcH
Confidence 11 24555655544 578 3 55669864
No 332
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.28 E-value=0.009 Score=51.27 Aligned_cols=97 Identities=10% Similarity=0.100 Sum_probs=64.6
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~f 112 (211)
...+.++||-+ | .++|..++.+|++. +.+|++++.+++..+.+++. +...-+... .+..+.+.+. ...+
T Consensus 156 ~~~~g~~VlV~-Gasg~iG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~~--ga~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 156 QLRAGETVLVL-GAAGGIGTAAIQIAKGM---GAKVIAVVNRTAATEFVKSV--GADIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CCCTTCEEEES-STTSHHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHH--TCSEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCCCEEEEE-CCCCHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHhc--CCcEEecCc-hhHHHHHHHHhCCCCc
Confidence 34567889999 6 47888888888875 67999999999999888864 211111111 3343433333 2379
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|+||-..... .++.+.+.|+++|.++++
T Consensus 229 Dvvid~~g~~----~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 229 DMVVDPIGGP----AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEESCC------CHHHHHHTEEEEEEEEEC
T ss_pred eEEEECCchh----HHHHHHHhhcCCCEEEEE
Confidence 9998655432 466777888998887764
No 333
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.26 E-value=0.018 Score=50.23 Aligned_cols=103 Identities=13% Similarity=0.020 Sum_probs=65.3
Q ss_pred HhhCCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcc-hHHHhhhc-c-CC
Q 041509 36 AAGNNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGD-AQSLLLSH-F-RE 111 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gd-a~e~l~~l-~-~~ 111 (211)
+...+.++||-+ |+| +|..++.+|+++. ..+|+++|.+++..+.|++. |. +.|.....+ ..+.+.++ . ..
T Consensus 181 ~~~~~g~~VlV~-GaG~vG~~aiqlAk~~G--a~~Vi~~~~~~~~~~~a~~l--Ga-~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 181 AGVGPGSTVYVA-GAGPVGLAAAASARLLG--AAVVIVGDLNPARLAHAKAQ--GF-EIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TTCCTTCEEEEE-CCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHT--TC-EEEETTSSSCHHHHHHHHHSSSC
T ss_pred cCCCCCCEEEEE-CCcHHHHHHHHHHHHCC--CCeEEEEcCCHHHHHHHHHc--CC-cEEccCCcchHHHHHHHHhCCCC
Confidence 345677899999 754 4888888888762 23899999999999988753 21 211111112 23333333 2 47
Q ss_pred ccEEEEcCCcCc------------HHHHHHHHHhcCCCCcEEEEE
Q 041509 112 ADFVLIDCNLEN------------HEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 112 fD~VfiD~~~~~------------y~~~l~~~~~~L~pgG~viv~ 144 (211)
+|+||-...... ....++.+.+.|+++|.+++.
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 999975443221 124677788888998887664
No 334
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.26 E-value=0.0057 Score=52.56 Aligned_cols=54 Identities=26% Similarity=0.305 Sum_probs=43.1
Q ss_pred CCcEEEEEcchHHHhhhc-cCCccEEEEcCCcC-----------------cHHHHHHHHHhcCCCCcEEEEE
Q 041509 91 ASHVEFVIGDAQSLLLSH-FREADFVLIDCNLE-----------------NHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 91 ~~~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~-----------------~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.+..++++||+.+.++.+ .++||+||+|.+-. .+.+.++++.++|+|+|.+++.
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 467899999999988766 56899999997531 1466778888999998887775
No 335
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.23 E-value=0.0079 Score=51.27 Aligned_cols=98 Identities=13% Similarity=0.150 Sum_probs=63.5
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~f 112 (211)
...+.++||-+ | .|+|..++.++... +.+|++++.+++..+.+++. . ....+.....+..+.+.+. ...+
T Consensus 142 ~~~~g~~vlV~-Ga~ggiG~~~~~~a~~~---G~~Vi~~~~~~~~~~~~~~~-g-~~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 142 KVKPGDYVLIH-AAAGGMGHIMVPWARHL---GATVIGTVSTEEKAETARKL-G-CHHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CCCTTCEEEET-TTTSTTHHHHHHHHHHT---TCEEEEEESSHHHHHHHHHH-T-CSEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCCCEEEEE-CCccHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHc-C-CCEEEECCCHHHHHHHHHHhCCCCC
Confidence 34567889999 7 57888888888764 67999999999888888753 2 1111111112223333222 3479
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|++|-.... ..++.+.+.|+++|.++..
T Consensus 216 d~vi~~~g~----~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 216 DVVYDSIGK----DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EEEEECSCT----TTHHHHHHTEEEEEEEEEC
T ss_pred eEEEECCcH----HHHHHHHHhhccCCEEEEE
Confidence 999865543 4567778888888877664
No 336
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.20 E-value=0.007 Score=51.41 Aligned_cols=99 Identities=11% Similarity=0.030 Sum_probs=63.9
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~f 112 (211)
...+.++||-+ | .|+|..++.++.+. +.+|++++.+++..+.+++. . ....+.....+..+.+.+. ...+
T Consensus 137 ~~~~g~~vlV~-Ga~ggiG~~~~~~a~~~---G~~V~~~~~~~~~~~~~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 137 EIKPDEQFLFH-AAAGGVGLIACQWAKAL---GAKLIGTVGTAQKAQSALKA-G-AWQVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp CCCTTCEEEES-STTBHHHHHHHHHHHHH---TCEEEEEESSHHHHHHHHHH-T-CSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCCCEEEEE-CCCCHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHc-C-CCEEEECCCccHHHHHHHHhCCCCc
Confidence 34567889999 7 67888888887765 57999999999988888763 2 1111111112222333222 3479
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
|++|-... . ..++.+.+.|+++|.++..-
T Consensus 211 D~vi~~~g-~---~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVG-R---DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSC-G---GGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCc-h---HHHHHHHHHhcCCCEEEEEe
Confidence 99986665 2 45677788888888876643
No 337
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.16 E-value=0.0074 Score=51.55 Aligned_cols=99 Identities=19% Similarity=0.139 Sum_probs=65.2
Q ss_pred hhCCCCeEEEEccc--cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEE-cchHHHhhhc-cCCc
Q 041509 37 AGNNAQLMVVACAN--VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVI-GDAQSLLLSH-FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~Gt--g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~-gda~e~l~~l-~~~f 112 (211)
...+.++||-+ |+ |+|..++.++.+. +.+|++++.+++..+.+++.+. ....+.... .+..+.+... .+.+
T Consensus 152 ~~~~g~~vlI~-Ga~g~iG~~~~~~a~~~---G~~V~~~~~~~~~~~~~~~~~g-~~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 152 SPKEGETVYVS-AASGAVGQLVGQLAKMM---GCYVVGSAGSKEKVDLLKTKFG-FDDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CCCTTCEEEES-STTSHHHHHHHHHHHHT---TCEEEEEESSHHHHHHHHHTSC-CSEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCCCEEEEE-CCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHcC-CceEEecCCHHHHHHHHHHHhCCCC
Confidence 44567889999 75 7888888888764 5799999999998888874432 111111111 1333333332 3579
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|+||-.... ..++.+.+.|+++|.+++.
T Consensus 227 d~vi~~~g~----~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 227 DIYFENVGG----KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EEEEESSCH----HHHHHHHTTEEEEEEEEEC
T ss_pred cEEEECCCH----HHHHHHHHHHhcCCEEEEE
Confidence 999865542 4678888899998887764
No 338
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.15 E-value=0.014 Score=50.50 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=64.4
Q ss_pred CCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEE
Q 041509 40 NAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVL 116 (211)
Q Consensus 40 ~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~Vf 116 (211)
+.++||-+ | .++|..++.+|+++. +.+|++++.+++..+.+++. . .+.+--...+..+.+.++ .+.+|+||
T Consensus 171 ~g~~VlV~-Ga~G~vG~~a~qlak~~~--g~~Vi~~~~~~~~~~~~~~l-G--ad~vi~~~~~~~~~v~~~~~~g~Dvvi 244 (363)
T 4dvj_A 171 AAPAILIV-GGAGGVGSIAVQIARQRT--DLTVIATASRPETQEWVKSL-G--AHHVIDHSKPLAAEVAALGLGAPAFVF 244 (363)
T ss_dssp SEEEEEEE-STTSHHHHHHHHHHHHHC--CSEEEEECSSHHHHHHHHHT-T--CSEEECTTSCHHHHHHTTCSCCEEEEE
T ss_pred CCCEEEEE-CCCCHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHc-C--CCEEEeCCCCHHHHHHHhcCCCceEEE
Confidence 45679988 6 567888888888752 67999999999999888762 2 121110012333333333 35799887
Q ss_pred EcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 117 IDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 117 iD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
-.... ...++.+.+.|+++|.++++.
T Consensus 245 d~~g~---~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 245 STTHT---DKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp ECSCH---HHHHHHHHHHSCTTCEEEECS
T ss_pred ECCCc---hhhHHHHHHHhcCCCEEEEEC
Confidence 44332 246778888899999988763
No 339
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.13 E-value=0.0088 Score=51.76 Aligned_cols=99 Identities=17% Similarity=0.090 Sum_probs=64.1
Q ss_pred HhhCCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEE-cchHHHhhhc--cCC
Q 041509 36 AAGNNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVI-GDAQSLLLSH--FRE 111 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~-gda~e~l~~l--~~~ 111 (211)
+...+.++||-+ |+| +|..++.+|++. +.+|++++.+++..+.+++. +...-+. .. .|..+.+.++ ...
T Consensus 185 ~~~~~g~~VlV~-G~G~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~l--Ga~~vi~-~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 185 GHLRAGDRVVVQ-GTGGVALFGLQIAKAT---GAEVIVTSSSREKLDRAFAL--GADHGIN-RLEEDWVERVYALTGDRG 257 (363)
T ss_dssp TCCCTTCEEEEE-SSBHHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHH--TCSEEEE-TTTSCHHHHHHHHHTTCC
T ss_pred cCCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCEEEEEecCchhHHHHHHc--CCCEEEc-CCcccHHHHHHHHhCCCC
Confidence 344567899999 755 488888888875 67999999999999888763 2211121 11 2333333333 347
Q ss_pred ccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 112 ADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 112 fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+|+||-..... .++.+.+.|+|+|.+++.-
T Consensus 258 ~D~vid~~g~~----~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 258 ADHILEIAGGA----GLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEEEEETTSS----CHHHHHHHEEEEEEEEEEC
T ss_pred ceEEEECCChH----HHHHHHHHhhcCCEEEEEe
Confidence 99998655532 3556667778888877653
No 340
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.11 E-value=0.018 Score=49.26 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=63.7
Q ss_pred hhCCCCeEEEEccc-cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcE-EEEEcchHHHhhhccCCccE
Q 041509 37 AGNNAQLMVVACAN-VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHV-EFVIGDAQSLLLSHFREADF 114 (211)
Q Consensus 37 ~~~~~~~VLEi~Gt-g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V-~~~~gda~e~l~~l~~~fD~ 114 (211)
...+.++||-+ |+ ++|..++.+|++. +.+|++++.+++..+.+++ +. . +.+ .....|..+.+.+..+.+|+
T Consensus 161 ~~~~g~~VlV~-GaG~vG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~-lG-a-~~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 161 GAKPGEWVAIY-GIGGLGHVAVQYAKAM---GLNVVAVDIGDEKLELAKE-LG-A-DLVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TCCTTCEEEEE-CCSTTHHHHHHHHHHT---TCEEEEECSCHHHHHHHHH-TT-C-SEEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHH-CC-C-CEEecCCCccHHHHHHHHhCCCCE
Confidence 45667899999 64 4788888888775 5799999999999988875 22 1 111 11112333333222257999
Q ss_pred EEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 115 VLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 115 VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
||-.... ...++.+.+.|+++|.++..
T Consensus 234 vid~~g~---~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 234 AVVTAVS---KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEESSCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred EEECCCC---HHHHHHHHHHhhcCCEEEEe
Confidence 9865543 24567777888888877653
No 341
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.10 E-value=0.037 Score=40.18 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=58.9
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH--Hhhhc-cCCccEEEEc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS--LLLSH-FREADFVLID 118 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l-~~~fD~VfiD 118 (211)
.+|+=+ |+ |..+..++..+...+.+|+.+|.+++..+.+++.. .+.++.+|..+ .+... ...+|+|++.
T Consensus 5 m~i~Ii-G~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 5 MYIIIA-GI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp CEEEEE-CC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CEEEEE-CC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 467777 65 77777777777655678999999998776655432 24566777642 33222 3579999988
Q ss_pred CCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 119 CNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
.+.......+..+.+.+.++ .+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 77 TGKEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CSCHHHHHHHHHHHHHTTCC-CEEE
T ss_pred eCCchHHHHHHHHHHHcCCC-EEEE
Confidence 65543334444455556664 4554
No 342
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.07 E-value=0.035 Score=41.30 Aligned_cols=93 Identities=12% Similarity=0.150 Sum_probs=59.8
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH--Hhhhc-cCCccEEEEc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS--LLLSH-FREADFVLID 118 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l-~~~fD~VfiD 118 (211)
++|+=+ |+ |..+..+++.+...+-.|+.+|.+++.++.+++ ..+.++.||+.+ .+... -..+|.|++.
T Consensus 8 ~~viIi-G~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~------~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 8 NHALLV-GY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE------RGVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp SCEEEE-CC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH------TTCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCEEEE-Cc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH------cCCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 467777 75 666677777776557799999999998887764 135678999754 44432 3578999987
Q ss_pred CCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 119 CNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
.+........-...+.+.|+..++.
T Consensus 79 ~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 79 IPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp CSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCChHHHHHHHHHHHHHCCCCeEEE
Confidence 6654332222233344556555443
No 343
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.05 E-value=0.0089 Score=51.54 Aligned_cols=98 Identities=12% Similarity=0.162 Sum_probs=64.0
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCcc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREAD 113 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD 113 (211)
...+.++||-+ | .++|..++.++++. +.+|++++.+++..+.+++. . ...-+.....+..+.+... .+.+|
T Consensus 164 ~~~~g~~VlV~-Gg~g~iG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~l-G-a~~~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 164 GLTEGESVLIH-GGTSGIGTTAIQLARAF---GAEVYATAGSTGKCEACERL-G-AKRGINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CCCTTCEEEES-STTSHHHHHHHHHHHHT---TCEEEEEESSHHHHHHHHHH-T-CSEEEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCCCEEEEE-cCCCHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHhc-C-CCEEEeCCchHHHHHHHHHhCCCce
Confidence 34567889988 4 56788888888765 67999999999999888763 2 1111111112333333322 46899
Q ss_pred EEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 114 FVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 114 ~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+||-..... .++.+.+.|+++|.+++.
T Consensus 238 vvid~~g~~----~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 238 IILDMIGAA----YFERNIASLAKDGCLSII 264 (353)
T ss_dssp EEEESCCGG----GHHHHHHTEEEEEEEEEC
T ss_pred EEEECCCHH----HHHHHHHHhccCCEEEEE
Confidence 888655442 466677888898887653
No 344
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=96.04 E-value=0.017 Score=49.67 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=64.7
Q ss_pred HhhCCC--CeEEEEccc--cHHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-c
Q 041509 36 AAGNNA--QLMVVACAN--VANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-F 109 (211)
Q Consensus 36 ~~~~~~--~~VLEi~Gt--g~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~ 109 (211)
+...+. ++||-. |+ |+|..++.++.+. +. +|++++.+++..+.+++.+. ....+.....+..+.+... .
T Consensus 154 ~~~~~g~~~~vlI~-GasggiG~~~~~~a~~~---Ga~~Vi~~~~~~~~~~~~~~~~g-~~~~~d~~~~~~~~~~~~~~~ 228 (357)
T 2zb4_A 154 GHITAGSNKTMVVS-GAAGACGSVAGQIGHFL---GCSRVVGICGTHEKCILLTSELG-FDAAINYKKDNVAEQLRESCP 228 (357)
T ss_dssp SCCCTTSCCEEEES-STTBHHHHHHHHHHHHT---TCSEEEEEESCHHHHHHHHHTSC-CSEEEETTTSCHHHHHHHHCT
T ss_pred cCCCCCCccEEEEE-CCCcHHHHHHHHHHHHC---CCCeEEEEeCCHHHHHHHHHHcC-CceEEecCchHHHHHHHHhcC
Confidence 345566 889999 64 7787777777764 55 99999999988888876443 1111111112233333322 3
Q ss_pred CCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 110 READFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 110 ~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+.+|++|-.... ..++.+.+.|+++|.++++
T Consensus 229 ~~~d~vi~~~G~----~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 229 AGVDVYFDNVGG----NISDTVISQMNENSHIILC 259 (357)
T ss_dssp TCEEEEEESCCH----HHHHHHHHTEEEEEEEEEC
T ss_pred CCCCEEEECCCH----HHHHHHHHHhccCcEEEEE
Confidence 379999866552 5678888899998887764
No 345
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.03 E-value=0.027 Score=48.25 Aligned_cols=91 Identities=16% Similarity=0.096 Sum_probs=63.0
Q ss_pred hhCCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 37 AGNNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
...+.++||-+ |+| +|..++.+|++. +.+|++++.+++..+.+++. | .+.+ + .+..+ +...+|+|
T Consensus 173 ~~~~g~~VlV~-GaG~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~l--G-a~~v--~-~~~~~----~~~~~D~v 238 (348)
T 3two_A 173 KVTKGTKVGVA-GFGGLGSMAVKYAVAM---GAEVSVFARNEHKKQDALSM--G-VKHF--Y-TDPKQ----CKEELDFI 238 (348)
T ss_dssp TCCTTCEEEEE-SCSHHHHHHHHHHHHT---TCEEEEECSSSTTHHHHHHT--T-CSEE--E-SSGGG----CCSCEEEE
T ss_pred CCCCCCEEEEE-CCcHHHHHHHHHHHHC---CCeEEEEeCCHHHHHHHHhc--C-CCee--c-CCHHH----HhcCCCEE
Confidence 45678899999 765 488888888875 56999999999999988762 2 2222 2 34322 23389999
Q ss_pred EEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 116 LIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|-..... ..++.+.+.|+|+|.++++
T Consensus 239 id~~g~~---~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 239 ISTIPTH---YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp EECCCSC---CCHHHHHTTEEEEEEEEEC
T ss_pred EECCCcH---HHHHHHHHHHhcCCEEEEE
Confidence 8544433 2466677888998887764
No 346
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.97 E-value=0.0042 Score=51.56 Aligned_cols=52 Identities=10% Similarity=0.001 Sum_probs=40.4
Q ss_pred cEEEEEcchHHHhhhc-cCCccEEEEcCCcC-----------------cHHHHHHHHHhcCCCCcEEEEE
Q 041509 93 HVEFVIGDAQSLLLSH-FREADFVLIDCNLE-----------------NHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 93 ~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~-----------------~y~~~l~~~~~~L~pgG~viv~ 144 (211)
..++++||+.+.+..+ .++||+||+|.+-. ...++++++.++|+|+|.+++.
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3568999999998876 46899999998521 1256777888899998887775
No 347
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.94 E-value=0.02 Score=47.44 Aligned_cols=45 Identities=13% Similarity=0.087 Sum_probs=38.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG 88 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~ 88 (211)
.+...|||. .||+|.+++.... + +.+++++|++|...+.|+++++
T Consensus 211 ~~~~~vlD~-f~GsGtt~~~a~~-~---gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 211 NPNDLVLDC-FMGSGTTAIVAKK-L---GRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp CTTCEEEES-SCTTCHHHHHHHH-T---TCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEEC-CCCCCHHHHHHHH-c---CCeEEEEeCCHHHHHHHHHHHH
Confidence 567889999 6999987666554 2 6799999999999999999987
No 348
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.91 E-value=0.012 Score=50.30 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=62.7
Q ss_pred hCCCCeEEEEccc--cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcE-EEEEcchHHHhhhc--cCCc
Q 041509 38 GNNAQLMVVACAN--VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHV-EFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 38 ~~~~~~VLEi~Gt--g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V-~~~~gda~e~l~~l--~~~f 112 (211)
..+.++||-+ |+ ++|..++.++.+. +.+|++++.+++..+.+++. + .+.+ .....+..+.+.+. ...+
T Consensus 164 ~~~g~~vlV~-Gasg~iG~~~~~~a~~~---G~~Vi~~~~~~~~~~~~~~~--g-a~~~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 164 VRPGDDVLVM-AAGSGVSVAAIQIAKLF---GARVIATAGSEDKLRRAKAL--G-ADETVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp CCTTCEEEEC-STTSTTHHHHHHHHHHT---TCEEEEEESSHHHHHHHHHH--T-CSEEEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCCCEEEEE-CCCchHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHhc--C-CCEEEcCCcccHHHHHHHHhCCCCc
Confidence 4567889999 75 7898888888775 57999999999998888753 2 1211 11112222333322 2479
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|+||-... . ..++.+.+.|+++|.++..
T Consensus 237 d~vi~~~g-~---~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 237 DKVVDHTG-A---LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp EEEEESSC-S---SSHHHHHHHEEEEEEEEES
T ss_pred eEEEECCC-H---HHHHHHHHhhccCCEEEEE
Confidence 99987665 3 2355666777888877653
No 349
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.80 E-value=0.035 Score=46.47 Aligned_cols=92 Identities=18% Similarity=0.093 Sum_probs=63.1
Q ss_pred hCCCCeEEEEccc--cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcch-HHHhhhccCCccE
Q 041509 38 GNNAQLMVVACAN--VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDA-QSLLLSHFREADF 114 (211)
Q Consensus 38 ~~~~~~VLEi~Gt--g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda-~e~l~~l~~~fD~ 114 (211)
..+.++||-+ |+ ++|..++.++++. +.+|++++.+++..+.+++ + + .+. ++.-+- .+....+ +.+|+
T Consensus 123 ~~~g~~vlV~-Ga~G~vG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~-~-g-a~~--~~~~~~~~~~~~~~-~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQ-AAAGALGTAAVQVARAM---GLRVLAAASRPEKLALPLA-L-G-AEE--AATYAEVPERAKAW-GGLDL 192 (302)
T ss_dssp CCTTCEEEES-STTBHHHHHHHHHHHHT---TCEEEEEESSGGGSHHHHH-T-T-CSE--EEEGGGHHHHHHHT-TSEEE
T ss_pred CCCCCEEEEE-CCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-c-C-CCE--EEECCcchhHHHHh-cCceE
Confidence 4567889999 75 7888888888875 5699999999998888865 2 2 222 222222 2333333 67999
Q ss_pred EEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 115 VLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 115 VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
||- ... ..++.+.+.|+++|.++..
T Consensus 193 vid-~g~----~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 193 VLE-VRG----KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEE-CSC----TTHHHHHTTEEEEEEEEEC
T ss_pred EEE-CCH----HHHHHHHHhhccCCEEEEE
Confidence 986 543 3567778888998877653
No 350
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.79 E-value=0.01 Score=51.01 Aligned_cols=55 Identities=11% Similarity=0.109 Sum_probs=42.2
Q ss_pred CcEEEE-EcchHHHhhhc-cCCccEEEEcCCcC----------cH----HHHHHHHHhcCCCCcEEEEEec
Q 041509 92 SHVEFV-IGDAQSLLLSH-FREADFVLIDCNLE----------NH----EGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 92 ~~V~~~-~gda~e~l~~l-~~~fD~VfiD~~~~----------~y----~~~l~~~~~~L~pgG~viv~dn 146 (211)
...+++ +||+.+.+..+ .++||+||+|.+-. .| .+++.++.++|+|+|.+++..+
T Consensus 37 ~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp CEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 457888 99999998876 46899999998532 23 5567777888999888877544
No 351
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.79 E-value=0.024 Score=48.56 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=64.5
Q ss_pred HhhCCCCeEEEEcccc--HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-c-CC
Q 041509 36 AAGNNAQLMVVACANV--ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-F-RE 111 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg--~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~-~~ 111 (211)
+...+.++||-+ |+| +|..++.++.+.. +.+|++++.+++..+.+++. . ....+.....+..+.+..+ . +.
T Consensus 166 ~~~~~g~~vlV~-Gagg~iG~~~~~~a~~~~--Ga~Vi~~~~~~~~~~~~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 166 ASLDPTKTLLVV-GAGGGLGTMAVQIAKAVS--GATIIGVDVREEAVEAAKRA-G-ADYVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TTCCTTCEEEEE-TTTSHHHHHHHHHHHHHT--CCEEEEEESSHHHHHHHHHH-T-CSEEEETTTSCHHHHHHHHTTTSC
T ss_pred cCCCCCCEEEEE-CCCccHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHh-C-CCEEecCCCccHHHHHHHHhcCCC
Confidence 345677899999 655 7887777777641 46899999999998888653 2 1111111111222223333 2 58
Q ss_pred ccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 112 ADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 112 fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+|++|-.... ...++.+.+.|+|+|.++..
T Consensus 241 ~d~vi~~~g~---~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 241 VDAVIDLNNS---EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EEEEEESCCC---HHHHTTGGGGEEEEEEEEEC
T ss_pred ceEEEECCCC---HHHHHHHHHHHhcCCEEEEE
Confidence 9999865543 24677788889998877664
No 352
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.77 E-value=0.011 Score=49.92 Aligned_cols=54 Identities=22% Similarity=0.199 Sum_probs=40.1
Q ss_pred CCcEEEEEcchHHHhhhc-cCCccEEEEcCCcC---c-------------H-------HHHHHHHHhcCCCCcEEEEE
Q 041509 91 ASHVEFVIGDAQSLLLSH-FREADFVLIDCNLE---N-------------H-------EGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 91 ~~~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~---~-------------y-------~~~l~~~~~~L~pgG~viv~ 144 (211)
..++++++||+.+.++.+ +++||+||.|.+-. . | .++++++.++|+|+|.+++.
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 457899999999988765 47999999997531 1 1 34567788899999987664
No 353
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.76 E-value=0.022 Score=48.84 Aligned_cols=95 Identities=20% Similarity=0.222 Sum_probs=62.3
Q ss_pred CCCeEEEE-ccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEEE
Q 041509 40 NAQLMVVA-CANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVLI 117 (211)
Q Consensus 40 ~~~~VLEi-~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~Vfi 117 (211)
+.++||-+ +..++|..++.+|++. +.+|++++.+++..+.+++. . .+.+--...+..+.+... .+.+|+||-
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~l-G--a~~vi~~~~~~~~~~~~~~~~g~Dvv~d 223 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY---GLRVITTASRNETIEWTKKM-G--ADIVLNHKESLLNQFKTQGIELVDYVFC 223 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEECCSHHHHHHHHHH-T--CSEEECTTSCHHHHHHHHTCCCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHhc-C--CcEEEECCccHHHHHHHhCCCCccEEEE
Confidence 67889988 2256788888888765 67999999999999988873 2 111100012333333333 357998875
Q ss_pred cCCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 118 DCNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 118 D~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
.... ...++.+.+.|+++|.++.
T Consensus 224 ~~g~---~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 224 TFNT---DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp SSCH---HHHHHHHHHHEEEEEEEEE
T ss_pred CCCc---hHHHHHHHHHhccCCEEEE
Confidence 4442 3456777888899888765
No 354
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.70 E-value=0.031 Score=47.90 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=63.7
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~f 112 (211)
...+.++||-+ | .++|..++.+|++. +.+|+++ .+++..+.+++. +. +.+. ...+..+.+... ...+
T Consensus 147 ~~~~g~~VlV~-Ga~g~iG~~~~q~a~~~---Ga~Vi~~-~~~~~~~~~~~l--Ga-~~i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 147 QVQDGQTVLIQ-GGGGGVGHVAIQIALAR---GARVFAT-ARGSDLEYVRDL--GA-TPID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CCCTTCEEEEE-TTTSHHHHHHHHHHHHT---TCEEEEE-ECHHHHHHHHHH--TS-EEEE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCCCEEEEe-cCCCHHHHHHHHHHHHC---CCEEEEE-eCHHHHHHHHHc--CC-CEec-cCCCHHHHHHHHhcCCCc
Confidence 34567899999 7 57888888888875 6699999 888888888653 22 2233 222333333332 3479
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|+||-... . ..++.+.+.|+++|.++++
T Consensus 218 D~vid~~g-~---~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 218 DLVYDTLG-G---PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEEESSC-T---HHHHHHHHHEEEEEEEEES
T ss_pred eEEEECCC-c---HHHHHHHHHHhcCCeEEEE
Confidence 98875444 2 4677777888998887764
No 355
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.62 E-value=0.018 Score=49.58 Aligned_cols=99 Identities=11% Similarity=-0.049 Sum_probs=62.5
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~f 112 (211)
...+.++||-+ | .|+|..++.++... +.+|++++.+++..+.+++. +....+.....+..+.+.+. ...+
T Consensus 167 ~~~~g~~vlV~-GasggiG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~~--ga~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 167 CVKAGESVLVH-GASGGVGLAACQIARAY---GLKILGTAGTEEGQKIVLQN--GAHEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CCCTTCEEEEE-TCSSHHHHHHHHHHHHT---TCEEEEEESSHHHHHHHHHT--TCSEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCCCcCEEEEE-CCCChHHHHHHHHHHHC---CCEEEEEeCChhHHHHHHHc--CCCEEEeCCCchHHHHHHHHcCCCCc
Confidence 34567889999 7 47788877777764 67999999999988877643 21111111112222223222 2379
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
|++|-.... ..++.+.+.|+++|.++.+-
T Consensus 241 D~vi~~~G~----~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLAN----VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCHH----HHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCCh----HHHHHHHHhccCCCEEEEEe
Confidence 999755442 34667778889988877643
No 356
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.60 E-value=0.024 Score=48.91 Aligned_cols=99 Identities=13% Similarity=0.135 Sum_probs=63.4
Q ss_pred HhhCCCCeEEEEcc-ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchH-HHhhhccCCcc
Q 041509 36 AAGNNAQLMVVACA-NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQ-SLLLSHFREAD 113 (211)
Q Consensus 36 ~~~~~~~~VLEi~G-tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~-e~l~~l~~~fD 113 (211)
+...+.++||-+ | .++|..++.+|++. +.+|++++.+++..+.+++. . .+. ++.-+.. +....+.+.+|
T Consensus 175 ~~~~~g~~VlV~-GaG~vG~~~~qlak~~---Ga~Vi~~~~~~~~~~~~~~l-G--a~~--v~~~~~~~~~~~~~~~~~D 245 (360)
T 1piw_A 175 NGCGPGKKVGIV-GLGGIGSMGTLISKAM---GAETYVISRSSRKREDAMKM-G--ADH--YIATLEEGDWGEKYFDTFD 245 (360)
T ss_dssp TTCSTTCEEEEE-CCSHHHHHHHHHHHHH---TCEEEEEESSSTTHHHHHHH-T--CSE--EEEGGGTSCHHHHSCSCEE
T ss_pred cCCCCCCEEEEE-CCCHHHHHHHHHHHHC---CCEEEEEcCCHHHHHHHHHc-C--CCE--EEcCcCchHHHHHhhcCCC
Confidence 345677899999 6 45688888888876 56899999999999888763 2 121 2222111 22233336899
Q ss_pred EEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 114 FVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 114 ~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+||-..... ....++.+.+.|+++|.++..
T Consensus 246 ~vid~~g~~-~~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 246 LIVVCASSL-TDIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEECCSCS-TTCCTTTGGGGEEEEEEEEEC
T ss_pred EEEECCCCC-cHHHHHHHHHHhcCCCEEEEe
Confidence 998654430 012355667778888877653
No 357
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.57 E-value=0.063 Score=45.54 Aligned_cols=94 Identities=13% Similarity=0.074 Sum_probs=64.5
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcC---
Q 041509 43 LMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDC--- 119 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~--- 119 (211)
+|||++ ||+|-+++.|-.+- --.|.++|+|+.+.+.-+.|+. -+++.+|..++-......+|+++-..
T Consensus 2 kvidLF-sG~GG~~~G~~~aG---~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 2 NLISLF-SGAGGLDLGFQKAG---FRIICANEYDKSIWKTYESNHS-----AKLIKGDISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp EEEEES-CTTCHHHHHHHHTT---CEEEEEEECCTTTHHHHHHHCC-----SEEEESCGGGCCGGGSCCCSEEECCCCGG
T ss_pred eEEEeC-cCccHHHHHHHHCC---CEEEEEEeCCHHHHHHHHHHCC-----CCcccCChhhCCHhhCCcccEEEecCCCC
Confidence 689996 88998877776541 2457899999999999998865 25678999887554456789987542
Q ss_pred -----C-------cC--cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 120 -----N-------LE--NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 120 -----~-------~~--~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
. .+ .+.++++.+. .++| . +++.+|+-
T Consensus 73 ~fS~ag~~~g~~d~R~~L~~~~~r~i~-~~~P-k-~~~~ENV~ 112 (331)
T 3ubt_Y 73 SWSEGGSLRGIDDPRGKLFYEYIRILK-QKKP-I-FFLAENVK 112 (331)
T ss_dssp GTEETTEECCTTCGGGHHHHHHHHHHH-HHCC-S-EEEEEECC
T ss_pred CcCCCCCccCCCCchhHHHHHHHHHHh-ccCC-e-EEEeeeec
Confidence 1 11 2355555444 3678 3 55669974
No 358
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.55 E-value=0.024 Score=49.30 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=61.9
Q ss_pred hCCCCeEEEEccc-cHHHHHHHHHHHccCCC-cEEEEEeCChhHHHHHHHHhcCCCCcEEEEEc------chHHHhhhc-
Q 041509 38 GNNAQLMVVACAN-VANATTLALAAAAHQTG-GRVVCILRRVEEYKLSKKILGLDASHVEFVIG------DAQSLLLSH- 108 (211)
Q Consensus 38 ~~~~~~VLEi~Gt-g~G~stl~la~a~~~~~-g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~g------da~e~l~~l- 108 (211)
..+.++||-+ |+ ++|..++.+|++. + .+|++++.+++..+.+++. + .+. ++.- |..+.+.++
T Consensus 193 ~~~g~~VlV~-GaG~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~~~~l--G-a~~--vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 193 SFAGKTVVIQ-GAGPLGLFGVVIARSL---GAENVIVIAGSPNRLKLAEEI--G-ADL--TLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CCBTCEEEEE-CCSHHHHHHHHHHHHT---TBSEEEEEESCHHHHHHHHHT--T-CSE--EEETTTSCHHHHHHHHHHHT
T ss_pred CCCCCEEEEE-CcCHHHHHHHHHHHHc---CCceEEEEcCCHHHHHHHHHc--C-CcE--EEeccccCcchHHHHHHHHh
Confidence 4557889999 64 4688888888875 5 5999999999999888742 2 121 2222 222333333
Q ss_pred c-CCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 109 F-READFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 109 ~-~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
. ..+|+||-..... ..++.+.+.|+++|.++..
T Consensus 264 ~g~g~Dvvid~~g~~---~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 264 HGRGADFILEATGDS---RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp TTSCEEEEEECSSCT---THHHHHHHHEEEEEEEEEC
T ss_pred CCCCCcEEEECCCCH---HHHHHHHHHHhcCCEEEEE
Confidence 2 3799998554432 3466677778888887664
No 359
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.49 E-value=0.016 Score=51.01 Aligned_cols=78 Identities=14% Similarity=0.023 Sum_probs=43.1
Q ss_pred CCeEEEEccccHHHHHHHHHHHc-------------cCCCcEEEEEeCChhHHHHHHHHhcCCC-------------CcE
Q 041509 41 AQLMVVACANVANATTLALAAAA-------------HQTGGRVVCILRRVEEYKLSKKILGLDA-------------SHV 94 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~-------------~~~~g~v~tiE~~~~~~~~Ar~~~~~~~-------------~~V 94 (211)
+-+|+|+ ||++|..|+.++..+ .++.-+|+--|.-.......=+.+.... .+-
T Consensus 53 ~~~IaDl-GCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 53 PFTAVDL-GCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CEEEEEE-TCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred ceEEEec-CCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 4679999 999999999873322 1134677777765544332222232110 011
Q ss_pred EEEEcchHHHhhhc--cCCccEEEEcC
Q 041509 95 EFVIGDAQSLLLSH--FREADFVLIDC 119 (211)
Q Consensus 95 ~~~~gda~e~l~~l--~~~fD~VfiD~ 119 (211)
.|+.|.+..+-.++ .++||+|+...
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~ 158 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAF 158 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred eEEEecChhhhcccCCCcceEEEEecc
Confidence 23444333322222 67999999864
No 360
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.49 E-value=0.077 Score=39.03 Aligned_cols=71 Identities=20% Similarity=0.230 Sum_probs=51.1
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH--Hhhhc-cCCccEEEEc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS--LLLSH-FREADFVLID 118 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l-~~~fD~VfiD 118 (211)
++|+-+ |+ |..+..+++.+...+.+|+.+|.+++.++.+++. .+.++.||+.+ .+... ...+|.|++-
T Consensus 7 ~~v~I~-G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 7 YEYIVI-GS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE------GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CSEEEE-CC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CEEEEE-CC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 568888 76 5677777777765577899999999988776542 25678898754 34433 3579999987
Q ss_pred CCc
Q 041509 119 CNL 121 (211)
Q Consensus 119 ~~~ 121 (211)
.+.
T Consensus 78 ~~~ 80 (141)
T 3llv_A 78 GSD 80 (141)
T ss_dssp CSC
T ss_pred cCC
Confidence 663
No 361
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.45 E-value=0.027 Score=48.45 Aligned_cols=98 Identities=12% Similarity=0.105 Sum_probs=61.8
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~f 112 (211)
...+.++||-+ | .|+|..++.++.+. +.+|++++.+++..+.+++. . ....+..-..+..+.+.+. ...+
T Consensus 159 ~~~~g~~vlV~-Ga~ggiG~~~~~~a~~~---Ga~Vi~~~~~~~~~~~~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 159 NVQAGDYVLIH-AGLSGVGTAAIQLTRMA---GAIPLVTAGSQKKLQMAEKL-G-AAAGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CCCTTCEEEES-STTSHHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHH-T-CSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCCCEEEEE-CCccHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHc-C-CcEEEecCChHHHHHHHHHhcCCCc
Confidence 34567889999 7 57888877777764 67999999999988888543 2 1111111112222333222 2479
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|++|-..... .++.+.+.|+++|.+++.
T Consensus 233 d~vi~~~G~~----~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 233 NLILDCIGGS----YWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp EEEEESSCGG----GHHHHHHHEEEEEEEEEC
T ss_pred eEEEECCCch----HHHHHHHhccCCCEEEEE
Confidence 9998666543 355667778888877664
No 362
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.44 E-value=0.12 Score=44.03 Aligned_cols=97 Identities=14% Similarity=0.054 Sum_probs=63.0
Q ss_pred hhCCCCeEEEEccc-cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcch-HHHhhhc--cCCc
Q 041509 37 AGNNAQLMVVACAN-VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDA-QSLLLSH--FREA 112 (211)
Q Consensus 37 ~~~~~~~VLEi~Gt-g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda-~e~l~~l--~~~f 112 (211)
.. +.++||-+ |+ ++|..++.+|++..+ +.+|++++.+++..+.+++. . .+. ++.-+- .+....+ ...+
T Consensus 168 ~~-~g~~VlV~-GaG~vG~~aiqlak~~~~-Ga~Vi~~~~~~~~~~~~~~l-G--a~~--vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 168 KF-AEPVVIVN-GIGGLAVYTIQILKALMK-NITIVGISRSKKHRDFALEL-G--ADY--VSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp TC-SSCEEEEE-CCSHHHHHHHHHHHHHCT-TCEEEEECSCHHHHHHHHHH-T--CSE--EECHHHHHHHHHHHHTTCCE
T ss_pred CC-CCCEEEEE-CCCHHHHHHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHh-C--CCE--EeccccchHHHHHhhcCCCc
Confidence 45 77899999 65 458888888887521 46899999999999888763 2 121 121111 2222222 2379
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|+||-.... ...++.+.+.|+|+|.++..
T Consensus 240 D~vid~~g~---~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 240 SIAIDLVGT---EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEESSCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCCC---hHHHHHHHHHhhcCCEEEEe
Confidence 999855443 24577778888898887654
No 363
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.41 E-value=0.082 Score=46.83 Aligned_cols=99 Identities=12% Similarity=0.109 Sum_probs=63.7
Q ss_pred HhhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcch------------
Q 041509 36 AAGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDA------------ 101 (211)
Q Consensus 36 ~~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda------------ 101 (211)
+...+.++||-+ | .++|..++.+|++. +.+|+.++.+++..+.+++. +...-+.....|.
T Consensus 216 ~~~~~g~~VlV~-GasG~iG~~a~qla~~~---Ga~vi~~~~~~~~~~~~~~l--Ga~~~i~~~~~~~~~~~~~~~~~~~ 289 (447)
T 4a0s_A 216 AQMKQGDIVLIW-GASGGLGSYAIQFVKNG---GGIPVAVVSSAQKEAAVRAL--GCDLVINRAELGITDDIADDPRRVV 289 (447)
T ss_dssp TCCCTTCEEEET-TTTSHHHHHHHHHHHHT---TCEEEEEESSHHHHHHHHHT--TCCCEEEHHHHTCCTTGGGCHHHHH
T ss_pred cCCCCCCEEEEE-CCCCHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHhc--CCCEEEecccccccccccccccccc
Confidence 344567889988 6 57788888888775 67999999999998888652 2221121111110
Q ss_pred ------HHHhhhc-cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 102 ------QSLLLSH-FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 102 ------~e~l~~l-~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.+.+.+. ...+|+||-.... ..++.+.+.|+++|.++++
T Consensus 290 ~~~~~~~~~v~~~~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 290 ETGRKLAKLVVEKAGREPDIVFEHTGR----VTFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECSCH----HHHHHHHHHSCTTCEEEES
T ss_pred hhhhHHHHHHHHHhCCCceEEEECCCc----hHHHHHHHHHhcCCEEEEE
Confidence 1222222 4579998855443 3577778889999987764
No 364
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.33 E-value=0.036 Score=47.68 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=61.3
Q ss_pred HhhCCC------CeEEEEcc-ccHHHHH-HHHH-HHccCCCcE-EEEEeCChh---HHHHHHHHhcCCCCcEEEEEcchH
Q 041509 36 AAGNNA------QLMVVACA-NVANATT-LALA-AAAHQTGGR-VVCILRRVE---EYKLSKKILGLDASHVEFVIGDAQ 102 (211)
Q Consensus 36 ~~~~~~------~~VLEi~G-tg~G~st-l~la-~a~~~~~g~-v~tiE~~~~---~~~~Ar~~~~~~~~~V~~~~gda~ 102 (211)
+...+. ++||-+ | .++|..+ +.+| +++ +.+ |++++.+++ ..+.+++. . .+.+.....|..
T Consensus 162 ~~~~~g~~~~~~~~VlV~-GaG~vG~~a~iqla~k~~---Ga~~Vi~~~~~~~~~~~~~~~~~l-G--a~~v~~~~~~~~ 234 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVL-GNGSLGLLTLAMLKVDDK---GYENLYCLGRRDRPDPTIDIIEEL-D--ATYVDSRQTPVE 234 (357)
T ss_dssp HHHTTTTSCCCCCEEEEE-CCSHHHHHHHHHHHHCTT---CCCEEEEEECCCSSCHHHHHHHHT-T--CEEEETTTSCGG
T ss_pred cCCCCCcccCCCCEEEEE-CCCHHHHHHHHHHHHHHc---CCcEEEEEeCCcccHHHHHHHHHc-C--CcccCCCccCHH
Confidence 445566 899999 6 4457777 7777 654 455 999999998 88888642 2 222211112333
Q ss_pred HHhhhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 103 SLLLSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 103 e~l~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+ +.++.+.+|+||-.... ...++.+.+.|+++|.++..
T Consensus 235 ~-i~~~~gg~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 235 D-VPDVYEQMDFIYEATGF---PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp G-HHHHSCCEEEEEECSCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred H-HHHhCCCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEE
Confidence 3 33333479998744332 23567778888888877664
No 365
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.31 E-value=0.13 Score=38.51 Aligned_cols=97 Identities=13% Similarity=0.202 Sum_probs=60.5
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCCh-hHHHHHHHHhcCCCCcEEEEEcchHH--Hhhhc-cCCccEEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRV-EEYKLSKKILGLDASHVEFVIGDAQS--LLLSH-FREADFVL 116 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~-~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l-~~~fD~Vf 116 (211)
.++|+=+ |+ |..+..+++.+...+-+|+.+|.++ +..+..++... ..++++.||+.+ .+... -+..|.|+
T Consensus 3 ~~~vlI~-G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVC-GH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEE-CC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEE-CC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc---CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 3567766 64 7778888877765567899999984 55544444333 347889999853 44432 46889999
Q ss_pred EcCCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 117 IDCNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 117 iD~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
+..+............+.+.|...+++
T Consensus 77 ~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 77 ALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp ECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred EecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 876554333344444444544444544
No 366
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.28 E-value=0.12 Score=46.39 Aligned_cols=100 Identities=16% Similarity=0.111 Sum_probs=66.0
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC--------------CCcEEEEEcchHHHhhhc
Q 041509 43 LMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD--------------ASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~--------------~~~V~~~~gda~e~l~~l 108 (211)
+|.-| |+ ||.+..+|..+...+-+|+.+|++++.++..++..... ..++++ ..|..+.+.
T Consensus 4 kI~VI-G~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~~-- 77 (450)
T 3gg2_A 4 DIAVV-GI--GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAVP-- 77 (450)
T ss_dssp EEEEE-CC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHGG--
T ss_pred EEEEE-Cc--CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHHh--
Confidence 56667 65 67777777776655679999999999887766532110 233443 345554433
Q ss_pred cCCccEEEEcCCcC----------cHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 109 FREADFVLIDCNLE----------NHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 109 ~~~fD~VfiD~~~~----------~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
..|+||+.-+.. ...+.++.+.+.|++ |.++|......++
T Consensus 78 --~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~-g~iVV~~STv~pg 127 (450)
T 3gg2_A 78 --EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSR-YILIVTKSTVPVG 127 (450)
T ss_dssp --GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS-CEEEEECSCCCTT
T ss_pred --cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCC-CCEEEEeeeCCCc
Confidence 479999976544 457788888888887 6777655555555
No 367
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.24 E-value=0.025 Score=48.43 Aligned_cols=119 Identities=11% Similarity=-0.052 Sum_probs=72.9
Q ss_pred CCChhHHHHHHHHHh--hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC-CCcEEEEEc
Q 041509 23 AKEPNEAEFISALAA--GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD-ASHVEFVIG 99 (211)
Q Consensus 23 ~~~~~~~~lL~~l~~--~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~-~~~V~~~~g 99 (211)
..++...+|....-+ ..+...|||+ ||++|-.+.+.+... ...+|+++|+-..-.+.=+ .+..+ -.-|.|+.+
T Consensus 75 y~SR~~~KL~ei~~~~~l~~~~~VlDL-GaapGGwsq~~~~~~--gv~~V~avdvG~~~he~P~-~~~ql~w~lV~~~~~ 150 (321)
T 3lkz_A 75 PVSRGTAKLRWLVERRFLEPVGKVIDL-GCGRGGWCYYMATQK--RVQEVRGYTKGGPGHEEPQ-LVQSYGWNIVTMKSG 150 (321)
T ss_dssp CSSTHHHHHHHHHHTTSCCCCEEEEEE-TCTTCHHHHHHTTCT--TEEEEEEECCCSTTSCCCC-CCCBTTGGGEEEECS
T ss_pred ccchHHHHHHHHHHhcCCCCCCEEEEe-CCCCCcHHHHHHhhc--CCCEEEEEEcCCCCccCcc-hhhhcCCcceEEEec
Confidence 455666555544422 3456689999 999999988776543 2357999998764221000 00111 123889888
Q ss_pred -chHHHhhhccCCccEEEEcCCcC------c---HHHHHHHHHhcCCCC-cEEEEEecCCCC
Q 041509 100 -DAQSLLLSHFREADFVLIDCNLE------N---HEGVLRAVQAGNKPN-GAVVVGYNAFRK 150 (211)
Q Consensus 100 -da~e~l~~l~~~fD~VfiD~~~~------~---y~~~l~~~~~~L~pg-G~viv~dn~~~~ 150 (211)
|+... + ..++|+|++|-... + -...++.+.+.|+++ |.++| -+|.+
T Consensus 151 ~Dv~~l-~--~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~--KVl~p 207 (321)
T 3lkz_A 151 VDVFYR-P--SECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV--KVLCP 207 (321)
T ss_dssp CCTTSS-C--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE--EESCT
T ss_pred cCHhhC-C--CCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE--EEcCC
Confidence 77544 2 26799999996532 1 134666777778777 65554 55655
No 368
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.22 E-value=0.023 Score=48.70 Aligned_cols=95 Identities=18% Similarity=0.138 Sum_probs=61.4
Q ss_pred CCCeEEEEccc-cHHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcE-EEEEcchHHHhhhc--cCCccE
Q 041509 40 NAQLMVVACAN-VANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHV-EFVIGDAQSLLLSH--FREADF 114 (211)
Q Consensus 40 ~~~~VLEi~Gt-g~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V-~~~~gda~e~l~~l--~~~fD~ 114 (211)
+.++||-+ |+ ++|..++.+|++. +. +|++++.+++..+.+++. . . +.+ .....+..+.+.++ ...+|+
T Consensus 167 ~g~~VlV~-GaG~vG~~~~q~a~~~---Ga~~Vi~~~~~~~~~~~~~~~-G-a-~~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLIT-GAGPLGLLGIAVAKAS---GAYPVIVSEPSDFRRELAKKV-G-A-DYVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEE-CCSHHHHHHHHHHHHT---TCCSEEEECSCHHHHHHHHHH-T-C-SEEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHHh-C-C-CEEECCCCcCHHHHHHHHcCCCCCCE
Confidence 66889999 65 4688888888775 45 899999999998888753 2 1 111 11112333333333 237999
Q ss_pred EEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 115 VLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 115 VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
||-.... ...++.+.+.|+++|.++..
T Consensus 240 vid~~g~---~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 240 FLEFSGA---PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEECSCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred EEECCCC---HHHHHHHHHHHhcCCEEEEE
Confidence 9855443 24567777888888877654
No 369
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.21 E-value=0.098 Score=45.24 Aligned_cols=96 Identities=9% Similarity=0.042 Sum_probs=61.3
Q ss_pred CCCCeEEEEccc--cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEE
Q 041509 39 NNAQLMVVACAN--VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFV 115 (211)
Q Consensus 39 ~~~~~VLEi~Gt--g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~V 115 (211)
.++++||-+ |+ ++|..++.+|++. +.+|+++- +++..+.+++. |...-+.....|..+.+.++ .+.+|+|
T Consensus 163 ~~g~~VlV~-Ga~G~vG~~a~qla~~~---Ga~Vi~~~-~~~~~~~~~~l--Ga~~vi~~~~~~~~~~v~~~t~g~~d~v 235 (371)
T 3gqv_A 163 SKPVYVLVY-GGSTATATVTMQMLRLS---GYIPIATC-SPHNFDLAKSR--GAEEVFDYRAPNLAQTIRTYTKNNLRYA 235 (371)
T ss_dssp SSCCEEEEE-STTSHHHHHHHHHHHHT---TCEEEEEE-CGGGHHHHHHT--TCSEEEETTSTTHHHHHHHHTTTCCCEE
T ss_pred CCCcEEEEE-CCCcHHHHHHHHHHHHC---CCEEEEEe-CHHHHHHHHHc--CCcEEEECCCchHHHHHHHHccCCccEE
Confidence 567889999 65 5899999999875 56888885 88888888653 21111222223444444433 4569998
Q ss_pred EEcCCcCcHHHHHHHHHhcC-CCCcEEEEE
Q 041509 116 LIDCNLENHEGVLRAVQAGN-KPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~~~y~~~l~~~~~~L-~pgG~viv~ 144 (211)
|-.... ...++.+.+.| +++|.++.+
T Consensus 236 ~d~~g~---~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 236 LDCITN---VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EESSCS---HHHHHHHHHHSCTTCEEEEES
T ss_pred EECCCc---hHHHHHHHHHhhcCCCEEEEE
Confidence 844443 24566667777 588877653
No 370
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.20 E-value=0.13 Score=39.57 Aligned_cols=93 Identities=12% Similarity=0.100 Sum_probs=58.1
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCC-CcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchH--HHhhhc--cCCccEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQT-GGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQ--SLLLSH--FREADFV 115 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~-~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~--e~l~~l--~~~fD~V 115 (211)
.++|+=+ |+ |..+..+++.+... +.+|+.+|.+++..+.+++. .++++.||+. +.+... ...+|.|
T Consensus 39 ~~~v~Ii-G~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~------g~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLIL-GM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE------GRNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEE-CC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT------TCCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEE-CC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC------CCCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 3578877 75 67777777777554 56899999999887776542 2456778764 344443 3579999
Q ss_pred EEcCCcCcH-HHHHHHHHhcCCCCcEEEE
Q 041509 116 LIDCNLENH-EGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 116 fiD~~~~~y-~~~l~~~~~~L~pgG~viv 143 (211)
++..+.... ......+ +.+.|...+++
T Consensus 110 i~~~~~~~~~~~~~~~~-~~~~~~~~ii~ 137 (183)
T 3c85_A 110 LLAMPHHQGNQTALEQL-QRRNYKGQIAA 137 (183)
T ss_dssp EECCSSHHHHHHHHHHH-HHTTCCSEEEE
T ss_pred EEeCCChHHHHHHHHHH-HHHCCCCEEEE
Confidence 986553322 2333333 34555555544
No 371
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=95.12 E-value=0.05 Score=48.08 Aligned_cols=77 Identities=6% Similarity=-0.158 Sum_probs=48.7
Q ss_pred CCeEEEEccccHHHHHHHHHHH----c-----------cCCCcEEEEEeCC-----------hhHHHHHHHHhcCCCCcE
Q 041509 41 AQLMVVACANVANATTLALAAA----A-----------HQTGGRVVCILRR-----------VEEYKLSKKILGLDASHV 94 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a----~-----------~~~~g~v~tiE~~-----------~~~~~~Ar~~~~~~~~~V 94 (211)
+-+|+|+ ||++|..|+.+... + +.+.-+|+--|.- |.+.+.+++.. +...+-
T Consensus 53 ~~~IaDl-GCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~-g~~~~~ 130 (384)
T 2efj_A 53 CFKVGDL-GCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN-GRKIGS 130 (384)
T ss_dssp EEEEEEE-TCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT-CCCTTS
T ss_pred ceEEEec-CCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc-cCCCCc
Confidence 4569999 99999999988766 1 1124567777766 55555443332 211234
Q ss_pred EEEEcchHHHhhhc--cCCccEEEEcC
Q 041509 95 EFVIGDAQSLLLSH--FREADFVLIDC 119 (211)
Q Consensus 95 ~~~~gda~e~l~~l--~~~fD~VfiD~ 119 (211)
.|+.|.+..+-.++ .+++|+||...
T Consensus 131 ~f~~gvpgSFy~rlfp~~S~d~v~Ss~ 157 (384)
T 2efj_A 131 CLIGAMPGSFYSRLFPEESMHFLHSCY 157 (384)
T ss_dssp EEEEECCSCTTSCCSCTTCEEEEEEES
T ss_pred eEEEecchhhhhccCCCCceEEEEecc
Confidence 66677665543333 67999999864
No 372
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=95.12 E-value=0.023 Score=47.34 Aligned_cols=119 Identities=13% Similarity=-0.028 Sum_probs=75.9
Q ss_pred CCChhHHHHHHHHH--hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC-CCcEEEEEc
Q 041509 23 AKEPNEAEFISALA--AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD-ASHVEFVIG 99 (211)
Q Consensus 23 ~~~~~~~~lL~~l~--~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~-~~~V~~~~g 99 (211)
..++..-+|+...- ...+...|||+ ||+.|-.+-+.+... ...+|+++|+-+.-.+.=+ .++.+ -+.|+|+.+
T Consensus 59 yrSRa~~KL~ei~ek~~l~~g~~VvDL-GaapGGWSq~~a~~~--g~~~V~avdvG~~ghe~P~-~~~s~gwn~v~fk~g 134 (267)
T 3p8z_A 59 AVSRGSAKLQWFVERNMVIPEGRVIDL-GCGRGGWSYYCAGLK--KVTEVRGYTKGGPGHEEPV-PMSTYGWNIVKLMSG 134 (267)
T ss_dssp CSSTHHHHHHHHHHTTSSCCCEEEEEE-SCTTSHHHHHHHTST--TEEEEEEECCCSTTSCCCC-CCCCTTTTSEEEECS
T ss_pred ccchHHHHHHHHHHhcCCCCCCEEEEc-CCCCCcHHHHHHHhc--CCCEEEEEecCCCCccCcc-hhhhcCcCceEEEec
Confidence 45555555544332 34566789999 999999988877653 2468999998765331100 01111 256999999
Q ss_pred -chHHHhhhccCCccEEEEcCCcC---------cHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 100 -DAQSLLLSHFREADFVLIDCNLE---------NHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 100 -da~e~l~~l~~~fD~VfiD~~~~---------~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
|.... + ..++|.|+.|-... .-.+.++.+.+.|++ |.++| -+|.+.
T Consensus 135 vDv~~~-~--~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~--KVl~py 190 (267)
T 3p8z_A 135 KDVFYL-P--PEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI--KVLNPY 190 (267)
T ss_dssp CCGGGC-C--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE--EESCCC
T ss_pred cceeec-C--CccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE--EEccCC
Confidence 87443 2 36899999995432 113467777888988 76655 556554
No 373
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.05 E-value=0.11 Score=44.76 Aligned_cols=98 Identities=9% Similarity=-0.011 Sum_probs=65.4
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCccEEEEcC
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREADFVLIDC 119 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~fD~VfiD~ 119 (211)
-+++|+| ||+|-.++.+..+-- ..-.|.++|+|+.+.+..+.|+.. ..++.+|..++.+.. ...+|+++...
T Consensus 4 ~~~idLF-aG~GG~~~G~~~aG~-~~~~v~a~e~d~~a~~ty~~N~~~----~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELY-SGIGGMHCAWKESGL-DGEIVAAVDINTVANSVYKHNFPE----TNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEEET-CTTTHHHHHHHHHTC-SEEEEEEECCCHHHHHHHHHHCTT----SCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CEEEEEC-cCccHHHHHHHHcCC-CceEEEEEeCCHHHHHHHHHhCCC----CceeccccccCCHHHhccCCCCEEEecC
Confidence 3699995 999988888776521 013578999999999999999762 235678887664321 23799998753
Q ss_pred C----------------c-CcHHHHHHHHHhcCC-CCcEEEEEecCC
Q 041509 120 N----------------L-ENHEGVLRAVQAGNK-PNGAVVVGYNAF 148 (211)
Q Consensus 120 ~----------------~-~~y~~~l~~~~~~L~-pgG~viv~dn~~ 148 (211)
+ + ..+.++++.+.. ++ | .+++.+|+-
T Consensus 78 PCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~-~~~P--~~~vlENV~ 121 (333)
T 4h0n_A 78 PCQPFTRNGKYLDDNDPRTNSFLYLIGILDQ-LDNV--DYILMENVK 121 (333)
T ss_dssp CCCCSEETTEECCTTCTTSCCHHHHHHHGGG-CTTC--CEEEEEECT
T ss_pred CCcchhhhhhccCCcCcccccHHHHHHHHHH-hcCC--CEEEEecch
Confidence 1 1 134566655544 55 7 356669975
No 374
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.00 E-value=0.12 Score=44.40 Aligned_cols=97 Identities=18% Similarity=0.128 Sum_probs=61.9
Q ss_pred hhC-CCCeEEEEccc-cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccE
Q 041509 37 AGN-NAQLMVVACAN-VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADF 114 (211)
Q Consensus 37 ~~~-~~~~VLEi~Gt-g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~ 114 (211)
... +.++||-+ |+ ++|..++.+|++. +.+|++++.+++..+.+++.+. .+.+ +..+-.+.+.++.+.+|+
T Consensus 176 ~~~~~g~~VlV~-GaG~vG~~a~qlak~~---Ga~Vi~~~~~~~~~~~~~~~lG--a~~v--i~~~~~~~~~~~~~g~D~ 247 (357)
T 2cf5_A 176 GLKQPGLRGGIL-GLGGVGHMGVKIAKAM---GHHVTVISSSNKKREEALQDLG--ADDY--VIGSDQAKMSELADSLDY 247 (357)
T ss_dssp STTSTTCEEEEE-CCSHHHHHHHHHHHHH---TCEEEEEESSTTHHHHHHTTSC--CSCE--EETTCHHHHHHSTTTEEE
T ss_pred CCCCCCCEEEEE-CCCHHHHHHHHHHHHC---CCeEEEEeCChHHHHHHHHHcC--Ccee--eccccHHHHHHhcCCCCE
Confidence 344 67889999 64 4688888888875 5699999999998888874443 1221 221112333334457999
Q ss_pred EEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 115 VLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 115 VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
||-..... ..++.+.+.|+|+|.++..
T Consensus 248 vid~~g~~---~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 248 VIDTVPVH---HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEECCCSC---CCSHHHHTTEEEEEEEEEC
T ss_pred EEECCCCh---HHHHHHHHHhccCCEEEEe
Confidence 87544432 1245566778888887664
No 375
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.95 E-value=0.39 Score=33.43 Aligned_cols=84 Identities=14% Similarity=0.012 Sum_probs=55.7
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCC-cEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH--HhhhccCCccEEEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTG-GRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS--LLLSHFREADFVLI 117 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~-g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l~~~fD~Vfi 117 (211)
.++|+-+ |+ |+.+..++..+...+ .+|+.++.+++..+.++ . ..++++.+|..+ .+......+|+||.
T Consensus 5 ~~~v~I~-G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~---~---~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVV-GA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN---R---MGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEE-CC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH---T---TTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCeEEEE-CC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---h---CCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 3578888 76 667777766665545 68999999998776654 1 235566666643 23333468999998
Q ss_pred cCCcCcHHHHHHHHHh
Q 041509 118 DCNLENHEGVLRAVQA 133 (211)
Q Consensus 118 D~~~~~y~~~l~~~~~ 133 (211)
..+........+.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~ 91 (118)
T 3ic5_A 76 AAPFFLTPIIAKAAKA 91 (118)
T ss_dssp CSCGGGHHHHHHHHHH
T ss_pred CCCchhhHHHHHHHHH
Confidence 8765545556666654
No 376
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.82 E-value=0.16 Score=38.20 Aligned_cols=97 Identities=16% Similarity=0.113 Sum_probs=58.2
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH--Hhhhc-cCCccEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS--LLLSH-FREADFV 115 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l-~~~fD~V 115 (211)
.+.++|+=+ |+ |..+..++..+...+.+|+.+|.+++.++.+++ ...+.++.+|+.+ .+... ...+|+|
T Consensus 17 ~~~~~v~Ii-G~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-----~~g~~~~~~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 17 QKSKYIVIF-GC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-----EFSGFTVVGDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCCEEEEE-CC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-----TCCSEEEESCTTSHHHHHTTTGGGCSEE
T ss_pred cCCCcEEEE-CC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-----cCCCcEEEecCCCHHHHHHcCcccCCEE
Confidence 456788888 75 666677776665546799999999886654331 1124566777532 33322 3468999
Q ss_pred EEcCCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 116 LIDCNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 116 fiD~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
++.............+.+.+.+...++.
T Consensus 89 i~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 89 FAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp EECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 9877654444444444444444444443
No 377
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.73 E-value=0.018 Score=49.30 Aligned_cols=94 Identities=7% Similarity=0.054 Sum_probs=60.9
Q ss_pred CCCeEEEEcc-ccHHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcE-EEEEcchHHHhhhc-cCCccEE
Q 041509 40 NAQLMVVACA-NVANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHV-EFVIGDAQSLLLSH-FREADFV 115 (211)
Q Consensus 40 ~~~~VLEi~G-tg~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V-~~~~gda~e~l~~l-~~~fD~V 115 (211)
+.++||-+ | .++|..++.+|++. +. +|++++.+++..+.+++. . +.+ .....+..+.+.++ ...+|+|
T Consensus 164 ~g~~VlV~-GaG~vG~~~~q~a~~~---Ga~~Vi~~~~~~~~~~~~~~l-a---~~v~~~~~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLIT-GAGPIGLMAAMVVRAS---GAGPILVSDPNPYRLAFARPY-A---DRLVNPLEEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEE-CCSHHHHHHHHHHHHT---TCCSEEEECSCHHHHGGGTTT-C---SEEECTTTSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHHh-H---HhccCcCccCHHHHHHHhcCCCCCEE
Confidence 67889999 6 45688888888775 45 899999999888777654 2 111 10012333333322 4579999
Q ss_pred EEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 116 LIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|-.... ...++.+.+.|+++|.++..
T Consensus 236 id~~g~---~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 236 LEFSGN---EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EECSCC---HHHHHHHHHHEEEEEEEEEC
T ss_pred EECCCC---HHHHHHHHHHHhcCCEEEEE
Confidence 855443 24567777888888877653
No 378
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.69 E-value=0.16 Score=40.34 Aligned_cols=92 Identities=18% Similarity=0.147 Sum_probs=60.8
Q ss_pred EEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH--Hhhhc-cCCccEEEEcCC
Q 041509 44 MVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS--LLLSH-FREADFVLIDCN 120 (211)
Q Consensus 44 VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l-~~~fD~VfiD~~ 120 (211)
|+=+ | .|..+..+++.+...+-.|+.+|.+++.++...+.. .+.++.||+.+ .+... -...|.|++..+
T Consensus 3 iiIi-G--~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 3 VIII-G--GETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp EEEE-C--CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred EEEE-C--CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 5555 5 488888888888665779999999999887654432 25688999864 34332 468899998776
Q ss_pred cCcHHHHHHHHHhcCCCCcEEEE
Q 041509 121 LENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 121 ~~~y~~~l~~~~~~L~pgG~viv 143 (211)
..........+.+.+.|...+++
T Consensus 75 ~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEE
T ss_pred CcHHHHHHHHHHHHHcCCCeEEE
Confidence 55444444544544444444443
No 379
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.56 E-value=0.027 Score=48.26 Aligned_cols=64 Identities=16% Similarity=0.008 Sum_probs=47.7
Q ss_pred hCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhh
Q 041509 38 GNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLL 106 (211)
Q Consensus 38 ~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~ 106 (211)
..+...|||-+ ||+|.+++. |..+ +-+.+++|++|...+.|++++.......+.+++|+.++..
T Consensus 250 ~~~~~~VlDpF-~GsGtt~~a-a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~~~~~~~~~~~~i~~ 313 (323)
T 1boo_A 250 TEPDDLVVDIF-GGSNTTGLV-AERE---SRKWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRILN 313 (323)
T ss_dssp CCTTCEEEETT-CTTCHHHHH-HHHT---TCEEEEEESCHHHHHHHHGGGSCSCSCHHHHHHHHHHHHT
T ss_pred CCCCCEEEECC-CCCCHHHHH-HHHc---CCCEEEEeCCHHHHHHHHHHHHhcccchHHHHHHHHHHHc
Confidence 35678899994 899975544 3333 6799999999999999999998333346667777777643
No 380
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.50 E-value=0.21 Score=43.01 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=58.7
Q ss_pred CCCeEEEEccc-cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 40 NAQLMVVACAN-VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 40 ~~~~VLEi~Gt-g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
+.++||-+ |+ ++|..++.+|++. +.+|++++.+++..+.+++.+. .+. ++.-+-.+.+.++.+.+|+||-.
T Consensus 187 ~g~~VlV~-GaG~vG~~~~q~a~~~---Ga~Vi~~~~~~~~~~~~~~~lG--a~~--v~~~~~~~~~~~~~~~~D~vid~ 258 (366)
T 1yqd_A 187 PGKHIGIV-GLGGLGHVAVKFAKAF---GSKVTVISTSPSKKEEALKNFG--ADS--FLVSRDQEQMQAAAGTLDGIIDT 258 (366)
T ss_dssp TTCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESCGGGHHHHHHTSC--CSE--EEETTCHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHhcC--Cce--EEeccCHHHHHHhhCCCCEEEEC
Confidence 67889989 64 4577777777765 5799999999998888775443 121 22221123333344589999865
Q ss_pred CCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 119 CNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
..... .++.+.+.|+++|.++..
T Consensus 259 ~g~~~---~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 259 VSAVH---PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp CSSCC---CSHHHHHHEEEEEEEEEC
T ss_pred CCcHH---HHHHHHHHHhcCCEEEEE
Confidence 44331 133445566778877653
No 381
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.40 E-value=0.12 Score=46.85 Aligned_cols=103 Identities=14% Similarity=0.107 Sum_probs=64.3
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-----CC---------CCcEEEEEcchHHHh
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-----LD---------ASHVEFVIGDAQSLL 105 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-----~~---------~~~V~~~~gda~e~l 105 (211)
...+|.-| |+ ||.+..+|..+...+-+|+++|++++.++..++.-. +. ..++++ ..|..+.+
T Consensus 7 ~~~~I~VI-G~--G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~ 82 (478)
T 2y0c_A 7 GSMNLTII-GS--GSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAV 82 (478)
T ss_dssp CCCEEEEE-CC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHH
T ss_pred CCceEEEE-Cc--CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHh
Confidence 44567778 75 455555555554446689999999998887766421 10 123433 33444433
Q ss_pred hhccCCccEEEEcCCc----------CcHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 106 LSHFREADFVLIDCNL----------ENHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 106 ~~l~~~fD~VfiD~~~----------~~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
. ..|+||+.-+. ....+.++.+.+.|+| |.+++......++
T Consensus 83 ~----~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~-~~iVV~~STv~~g 133 (478)
T 2y0c_A 83 A----HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTG-FKVIVDKSTVPVG 133 (478)
T ss_dssp H----HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCS-CEEEEECSCCCTT
T ss_pred h----cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCC-CCEEEEeCCcCCC
Confidence 3 47999987544 3446778888888887 6676655555455
No 382
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.33 E-value=0.11 Score=44.69 Aligned_cols=92 Identities=13% Similarity=0.019 Sum_probs=58.2
Q ss_pred CCeEEEEccc-cHHHHHHHHHHHccCCCcEEEEEeCCh---hHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 41 AQLMVVACAN-VANATTLALAAAAHQTGGRVVCILRRV---EEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 41 ~~~VLEi~Gt-g~G~stl~la~a~~~~~g~v~tiE~~~---~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
.++||-+ |+ ++|..++.++++. +.+|++++.++ +..+.+++. + .+.+. ..+..+.+.+..+.+|+||
T Consensus 181 g~~VlV~-GaG~vG~~~~q~a~~~---Ga~Vi~~~~~~~~~~~~~~~~~~--g-a~~v~--~~~~~~~~~~~~~~~d~vi 251 (366)
T 2cdc_A 181 CRKVLVV-GTGPIGVLFTLLFRTY---GLEVWMANRREPTEVEQTVIEET--K-TNYYN--SSNGYDKLKDSVGKFDVII 251 (366)
T ss_dssp TCEEEEE-SCHHHHHHHHHHHHHH---TCEEEEEESSCCCHHHHHHHHHH--T-CEEEE--CTTCSHHHHHHHCCEEEEE
T ss_pred CCEEEEE-CCCHHHHHHHHHHHhC---CCEEEEEeCCccchHHHHHHHHh--C-Cceec--hHHHHHHHHHhCCCCCEEE
Confidence 7899999 64 4566666677664 56999999998 777777643 2 22221 1122222221236799998
Q ss_pred EcCCcCcHHHHH-HHHHhcCCCCcEEEEE
Q 041509 117 IDCNLENHEGVL-RAVQAGNKPNGAVVVG 144 (211)
Q Consensus 117 iD~~~~~y~~~l-~~~~~~L~pgG~viv~ 144 (211)
-..... ..+ +.+.+.|+++|.++..
T Consensus 252 d~~g~~---~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 252 DATGAD---VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp ECCCCC---THHHHHHGGGEEEEEEEEEC
T ss_pred ECCCCh---HHHHHHHHHHHhcCCEEEEE
Confidence 655543 245 7778888998877654
No 383
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.32 E-value=0.079 Score=44.64 Aligned_cols=89 Identities=21% Similarity=0.124 Sum_probs=59.5
Q ss_pred eEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEEEcC
Q 041509 43 LMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVLIDC 119 (211)
Q Consensus 43 ~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~VfiD~ 119 (211)
.||-+ | .++|..++.+|++. +.+|++++.+++..+.+++. . .+. ++..+-.+.+..+ .+.+|+|| |+
T Consensus 149 ~VlV~-Ga~G~vG~~aiqla~~~---Ga~Vi~~~~~~~~~~~~~~l-G--a~~--vi~~~~~~~~~~~~~~~~d~v~-d~ 218 (324)
T 3nx4_A 149 EVVVT-GASGGVGSTAVALLHKL---GYQVAAVSGRESTHGYLKSL-G--ANR--ILSRDEFAESRPLEKQLWAGAI-DT 218 (324)
T ss_dssp CEEES-STTSHHHHHHHHHHHHT---TCCEEEEESCGGGHHHHHHH-T--CSE--EEEGGGSSCCCSSCCCCEEEEE-ES
T ss_pred eEEEE-CCCcHHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHhc-C--CCE--EEecCCHHHHHhhcCCCccEEE-EC
Confidence 48888 6 57898889899875 56999999999999999763 2 121 1111111112222 45799876 44
Q ss_pred CcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 120 NLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 120 ~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.-. +.++.+.+.|+|+|.++.+
T Consensus 219 ~g~---~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 219 VGD---KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp SCH---HHHHHHHHTEEEEEEEEEC
T ss_pred CCc---HHHHHHHHHHhcCCEEEEE
Confidence 322 3788888999998887764
No 384
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=94.30 E-value=0.029 Score=49.20 Aligned_cols=78 Identities=9% Similarity=0.020 Sum_probs=52.8
Q ss_pred CCeEEEEccccHHHHHHHHHHHc--------------cCCCcEEEEEeCChhHHHHHHHHhcCC-C-CcEEEEEcchHHH
Q 041509 41 AQLMVVACANVANATTLALAAAA--------------HQTGGRVVCILRRVEEYKLSKKILGLD-A-SHVEFVIGDAQSL 104 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~--------------~~~~g~v~tiE~~~~~~~~Ar~~~~~~-~-~~V~~~~gda~e~ 104 (211)
+-+|+|+ ||++|..|+.+...+ +.+.-+|+.-|.-.......-+.+..+ . .+-.|+.|.+..+
T Consensus 52 ~~~IaDl-GCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 52 RLAIADL-GCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp EECCEEE-SCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred ceEEEec-CCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3458999 999999988765541 233578899998888787776666521 1 1345666665543
Q ss_pred hhhc--cCCccEEEEcC
Q 041509 105 LLSH--FREADFVLIDC 119 (211)
Q Consensus 105 l~~l--~~~fD~VfiD~ 119 (211)
-.++ .+++|+||...
T Consensus 131 y~rlfp~~S~d~v~Ss~ 147 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSY 147 (359)
T ss_dssp SSCCSCTTCBSCEEEES
T ss_pred hhccCCCCceEEEEehh
Confidence 3333 68999999763
No 385
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.27 E-value=0.15 Score=44.06 Aligned_cols=97 Identities=11% Similarity=0.130 Sum_probs=60.3
Q ss_pred hCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 38 GNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 38 ~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
..+.++||-+ | .++|..++.+|++. +.+|++++ +++..+.+++. +...-+.....+..+.+.+ ...+|+|
T Consensus 181 ~~~g~~VlV~-Ga~G~vG~~~~qla~~~---Ga~Vi~~~-~~~~~~~~~~l--Ga~~v~~~~~~~~~~~~~~-~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLIL-GASGGVGTFAIQVMKAW---DAHVTAVC-SQDASELVRKL--GADDVIDYKSGSVEEQLKS-LKPFDFI 252 (375)
T ss_dssp TCTTCEEEEE-TTTSHHHHHHHHHHHHT---TCEEEEEE-CGGGHHHHHHT--TCSEEEETTSSCHHHHHHT-SCCBSEE
T ss_pred cCCCCEEEEE-CCCCHHHHHHHHHHHhC---CCEEEEEe-ChHHHHHHHHc--CCCEEEECCchHHHHHHhh-cCCCCEE
Confidence 4567889999 6 67888888888875 56899998 67777777542 2111111111233333332 3579998
Q ss_pred EEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 116 LIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|-..... . ..++...+.|+++|.++.+
T Consensus 253 id~~g~~-~-~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 253 LDNVGGS-T-ETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp EESSCTT-H-HHHGGGGBCSSSCCEEEES
T ss_pred EECCCCh-h-hhhHHHHHhhcCCcEEEEe
Confidence 7544332 1 2356677889999987763
No 386
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.22 E-value=0.15 Score=43.50 Aligned_cols=95 Identities=18% Similarity=0.092 Sum_probs=59.7
Q ss_pred CeEEEE-ccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCccEEEEc
Q 041509 42 QLMVVA-CANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREADFVLID 118 (211)
Q Consensus 42 ~~VLEi-~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~fD~VfiD 118 (211)
+.||=. +..++|..++.+|++. +.+|++++.+++..+.+++. +...-+.....|..+.+.++ ...+|+||-.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~---Ga~Vi~~~~~~~~~~~~~~~--Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~ 240 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE---GFRPIVTVRRDEQIALLKDI--GAAHVLNEKAPDFEATLREVMKAEQPRIFLDA 240 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH---TCEEEEEESCGGGHHHHHHH--TCSEEEETTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHc--CCCEEEECCcHHHHHHHHHHhcCCCCcEEEEC
Confidence 567664 2356788888888775 57999999999999988753 21111111112333333332 2479998754
Q ss_pred CCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 119 CNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
... ..++.+.+.|+++|.++++-
T Consensus 241 ~g~----~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 241 VTG----PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp SCH----HHHHHHHHHSCTTCEEEECC
T ss_pred CCC----hhHHHHHhhhcCCCEEEEEe
Confidence 442 23466778899999887643
No 387
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.18 E-value=0.088 Score=44.27 Aligned_cols=89 Identities=13% Similarity=0.047 Sum_probs=58.5
Q ss_pred hhCCCCeEEEEccc-cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEE
Q 041509 37 AGNNAQLMVVACAN-VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFV 115 (211)
Q Consensus 37 ~~~~~~~VLEi~Gt-g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~V 115 (211)
...+.++||-+ |+ ++|..++.+|++. +.+|++++ +++..+.+++. . . + .++ .| . ..+.+.+|+|
T Consensus 139 ~~~~g~~VlV~-GaG~vG~~a~qlak~~---Ga~Vi~~~-~~~~~~~~~~l-G-a-~--~v~-~d-~---~~v~~g~Dvv 203 (315)
T 3goh_A 139 PLTKQREVLIV-GFGAVNNLLTQMLNNA---GYVVDLVS-ASLSQALAAKR-G-V-R--HLY-RE-P---SQVTQKYFAI 203 (315)
T ss_dssp CCCSCCEEEEE-CCSHHHHHHHHHHHHH---TCEEEEEC-SSCCHHHHHHH-T-E-E--EEE-SS-G---GGCCSCEEEE
T ss_pred CCCCCCEEEEE-CCCHHHHHHHHHHHHc---CCEEEEEE-ChhhHHHHHHc-C-C-C--EEE-cC-H---HHhCCCccEE
Confidence 34567899999 54 5788888899876 56999999 99988888763 2 1 1 122 24 2 2235789988
Q ss_pred EEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 116 LIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 116 fiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|-..... .+..+.+.|+|+|.++.+
T Consensus 204 ~d~~g~~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 204 FDAVNSQ----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ECC-----------TTGGGEEEEEEEEEE
T ss_pred EECCCch----hHHHHHHHhcCCCEEEEE
Confidence 7333222 235667889999988775
No 388
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.13 E-value=0.062 Score=45.44 Aligned_cols=91 Identities=14% Similarity=0.041 Sum_probs=56.3
Q ss_pred eEEEEccc--cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEEEcC
Q 041509 43 LMVVACAN--VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVLIDC 119 (211)
Q Consensus 43 ~VLEi~Gt--g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~VfiD~ 119 (211)
+||-+ |+ +.|..++.+|++. +.+|++++.+++..+.+++ +. ...-+.....+ .+.+..+ .+.+|+||-..
T Consensus 152 ~VlV~-Ga~G~vG~~~~q~a~~~---Ga~vi~~~~~~~~~~~~~~-lG-a~~~i~~~~~~-~~~~~~~~~~~~d~vid~~ 224 (328)
T 1xa0_A 152 PVLVT-GATGGVGSLAVSMLAKR---GYTVEASTGKAAEHDYLRV-LG-AKEVLAREDVM-AERIRPLDKQRWAAAVDPV 224 (328)
T ss_dssp CEEES-STTSHHHHHHHHHHHHT---TCCEEEEESCTTCHHHHHH-TT-CSEEEECC----------CCSCCEEEEEECS
T ss_pred eEEEe-cCCCHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHH-cC-CcEEEecCCcH-HHHHHHhcCCcccEEEECC
Confidence 79999 74 7888888888875 5689999999988888875 22 11111111111 1222222 34799887544
Q ss_pred CcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 120 NLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 120 ~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
... .++.+.+.|+++|.++++
T Consensus 225 g~~----~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 225 GGR----TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp TTT----THHHHHHTEEEEEEEEEC
T ss_pred cHH----HHHHHHHhhccCCEEEEE
Confidence 332 466777888888887764
No 389
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.11 E-value=0.21 Score=42.44 Aligned_cols=95 Identities=11% Similarity=-0.002 Sum_probs=63.0
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCc--EEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH-HhhhccCCccEEEEc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGG--RVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS-LLLSHFREADFVLID 118 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g--~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e-~l~~l~~~fD~VfiD 118 (211)
++|.=| |+ |..+..+|..+...+- +|+.+|.+++.++.+++. +..+ -...|..+ .+ ...|+||+.
T Consensus 34 ~kI~II-G~--G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~--G~~~---~~~~~~~~~~~----~~aDvVila 101 (314)
T 3ggo_A 34 QNVLIV-GV--GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL--GIID---EGTTSIAKVED----FSPDFVMLS 101 (314)
T ss_dssp SEEEEE-SC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT--TSCS---EEESCTTGGGG----GCCSEEEEC
T ss_pred CEEEEE-ee--CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC--CCcc---hhcCCHHHHhh----ccCCEEEEe
Confidence 578888 75 4555555555544343 899999999888777542 2211 12344444 32 458999999
Q ss_pred CCcCcHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 119 CNLENHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
.+.....+.++.+.+.++| |.+++ |..-.+
T Consensus 102 vp~~~~~~vl~~l~~~l~~-~~iv~-d~~Svk 131 (314)
T 3ggo_A 102 SPVRTFREIAKKLSYILSE-DATVT-DQGSVK 131 (314)
T ss_dssp SCGGGHHHHHHHHHHHSCT-TCEEE-ECCSCC
T ss_pred CCHHHHHHHHHHHhhccCC-CcEEE-ECCCCc
Confidence 8877788889999988887 55554 654433
No 390
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.93 E-value=0.093 Score=46.75 Aligned_cols=98 Identities=10% Similarity=0.155 Sum_probs=62.6
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEE-----------cch--
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVI-----------GDA-- 101 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~-----------gda-- 101 (211)
...+.++||-+ | .++|..++.+|++. +.++++++.+++..+.+++. . ...-+.... .+.
T Consensus 225 ~~~~g~~VlV~-GasG~vG~~avqlak~~---Ga~vi~~~~~~~~~~~~~~l-G-a~~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 225 GMKQGDNVLIW-GASGGLGSYATQFALAG---GANPICVVSSPQKAEICRAM-G-AEAIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCCTTCEEEET-TTTSHHHHHHHHHHHHT---TCEEEEEESSHHHHHHHHHH-T-CCEEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCCEEEEE-CCCCHHHHHHHHHHHHc---CCeEEEEECCHHHHHHHHhh-C-CcEEEecCcCcccccccccccchHH
Confidence 44567889988 6 47888888888875 67999999999999988763 2 111111000 011
Q ss_pred ----HHHhhhc--cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 102 ----QSLLLSH--FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 102 ----~e~l~~l--~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.+.+.++ ...+|+||-.... +.++.+.+.|+++|.++++
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVFEHPGR----ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEECSCH----HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHhCCCCCcEEEEcCCc----hhHHHHHHHhhCCcEEEEE
Confidence 1222322 3589988744332 4677778888998887763
No 391
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.92 E-value=0.39 Score=40.67 Aligned_cols=96 Identities=16% Similarity=0.084 Sum_probs=61.6
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc----C--CCCcEE--EEEcchHHHhhhccCCcc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG----L--DASHVE--FVIGDAQSLLLSHFREAD 113 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~----~--~~~~V~--~~~gda~e~l~~l~~~fD 113 (211)
.+|.=| |+| ..+..+|..+...+.+|+.+|.+++.++..++... + ...... ....|..+.+ ..+|
T Consensus 5 mki~ii-G~G--~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D 77 (359)
T 1bg6_A 5 KTYAVL-GLG--NGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV----KDAD 77 (359)
T ss_dssp CEEEEE-CCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH----TTCS
T ss_pred CeEEEE-CCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH----hcCC
Confidence 578888 875 44455555554445689999999988877766521 1 110011 1233444432 4689
Q ss_pred EEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 114 FVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 114 ~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
+|++-.......+.++.+.+.+++ |.+++..
T Consensus 78 ~vi~~v~~~~~~~~~~~l~~~l~~-~~~vv~~ 108 (359)
T 1bg6_A 78 VILIVVPAIHHASIAANIASYISE-GQLIILN 108 (359)
T ss_dssp EEEECSCGGGHHHHHHHHGGGCCT-TCEEEES
T ss_pred EEEEeCCchHHHHHHHHHHHhCCC-CCEEEEc
Confidence 999988777778889999888887 5555544
No 392
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.83 E-value=0.41 Score=38.29 Aligned_cols=92 Identities=16% Similarity=0.094 Sum_probs=60.1
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchH--HHhhhc-cCCccEEEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQ--SLLLSH-FREADFVLI 117 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~--e~l~~l-~~~fD~Vfi 117 (211)
.++|+=+ |+ |..+..+++.+...+- |+.+|.+++.++.++ . .+.++.||+. +.+... -...|.|++
T Consensus 9 ~~~viI~-G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~----~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 9 SRHVVIC-GW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR---S----GANFVHGDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp -CEEEEE-SC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---T----TCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred CCEEEEE-CC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---c----CCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence 4578877 76 6888889988876445 999999998876664 1 3788999986 344433 457899998
Q ss_pred cCCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 118 DCNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 118 D~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
-.+.....-..-...+.+.|+..+++
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 78 DLESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp CCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred cCCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 76554333333334444566434443
No 393
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.68 E-value=0.23 Score=44.09 Aligned_cols=93 Identities=14% Similarity=0.142 Sum_probs=62.1
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH--Hhhhc-cCCccEEEEc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS--LLLSH-FREADFVLID 118 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l-~~~fD~VfiD 118 (211)
.+|+=+ |+ |..+..+++.+...+-.|+.||.|++.++.+++. .+.++.||+.+ .|... -+..|.|++.
T Consensus 5 ~~viIi-G~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~------g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 5 MRVIIA-GF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CSEEEE-CC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT------TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CeEEEE-CC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC------CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 457766 65 6677777777766577899999999999888742 25678999854 45443 4689999987
Q ss_pred CCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 119 CNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
.+.......+-...+.+.|.-.+++
T Consensus 76 ~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 76 IDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp CSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCChHHHHHHHHHHHHhCCCCeEEE
Confidence 7654333333344444566544444
No 394
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.62 E-value=0.21 Score=42.34 Aligned_cols=73 Identities=11% Similarity=0.024 Sum_probs=52.2
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcE-EEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc---cCCccE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGR-VVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH---FREADF 114 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~-v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l---~~~fD~ 114 (211)
.+.-+++|+| ||+|-.++.+..+-- .-. |.++|+|+.+.+..+.|+.+ ..++.+|..++.... .+.+|+
T Consensus 14 ~~~~~vidLF-aG~GG~~~g~~~aG~--~~~~v~a~E~d~~a~~ty~~N~~~----~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLF-DGIATGLLVLKDLGI--QVDRYIASEVCEDSITVGMVRHQG----KIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEET-CTTTHHHHHHHHTTB--CEEEEEEECCCHHHHHHHHHHTTT----CEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeC-cCccHHHHHHHHCCC--ccceEEEEECCHHHHHHHHHhCCC----CceeCCChHHccHHHhcccCCcCE
Confidence 3455799996 999988777765421 112 69999999999888888652 357789988764321 257999
Q ss_pred EEEc
Q 041509 115 VLID 118 (211)
Q Consensus 115 VfiD 118 (211)
++..
T Consensus 87 l~gg 90 (295)
T 2qrv_A 87 VIGG 90 (295)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9876
No 395
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.28 E-value=0.5 Score=40.95 Aligned_cols=102 Identities=12% Similarity=0.016 Sum_probs=66.0
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc------C--CCCcEEEEEcchHHHhhhccCCc
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG------L--DASHVEFVIGDAQSLLLSHFREA 112 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~------~--~~~~V~~~~gda~e~l~~l~~~f 112 (211)
..+|.=| |+ |..+..+|..+...+-+|+.++.+++.++..++.-. + +..++++ ..|..+.+ ...
T Consensus 29 ~mkI~VI-Ga--G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea~----~~a 100 (356)
T 3k96_A 29 KHPIAIL-GA--GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKASL----EGV 100 (356)
T ss_dssp CSCEEEE-CC--SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHHH----TTC
T ss_pred CCeEEEE-Cc--cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHHH----hcC
Confidence 3568888 76 455556666665545689999999998777665421 1 1233443 34554443 357
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
|+||+--+.....+.++.+.+.++|+-.++.+-|-+..
T Consensus 101 DvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 101 TDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp CEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBT
T ss_pred CEEEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCc
Confidence 99999877666788899999989875444443443433
No 396
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=93.24 E-value=0.093 Score=44.91 Aligned_cols=98 Identities=12% Similarity=-0.076 Sum_probs=56.6
Q ss_pred HhhCCCCeEEEEccc--cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCc
Q 041509 36 AAGNNAQLMVVACAN--VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREA 112 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gt--g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~f 112 (211)
+...+.++||-. |+ ++|..++.+|++.. +.+|++++ +++..+.++ +. ...-+. ...|..+.+.++ .+.+
T Consensus 138 ~~~~~g~~VlV~-Ga~G~vG~~a~qla~~~g--~~~V~~~~-~~~~~~~~~--~g-a~~~~~-~~~~~~~~~~~~~~~g~ 209 (349)
T 4a27_A 138 ANLREGMSVLVH-SAGGGVGQAVAQLCSTVP--NVTVFGTA-STFKHEAIK--DS-VTHLFD-RNADYVQEVKRISAEGV 209 (349)
T ss_dssp SCCCTTCEEEES-STTSHHHHHHHHHHTTST--TCEEEEEE-CGGGHHHHG--GG-SSEEEE-TTSCHHHHHHHHCTTCE
T ss_pred cCCCCCCEEEEE-cCCcHHHHHHHHHHHHcC--CcEEEEeC-CHHHHHHHH--cC-CcEEEc-CCccHHHHHHHhcCCCc
Confidence 344567889998 65 67777777776542 46899988 555556555 22 211122 223333333333 4589
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
|+||-..... .++.+.+.|+++|.++++-
T Consensus 210 Dvv~d~~g~~----~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 210 DIVLDCLCGD----NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEEECC-----------CTTEEEEEEEEEEC
T ss_pred eEEEECCCch----hHHHHHHHhhcCCEEEEEC
Confidence 9888544332 2467788899999887754
No 397
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.16 E-value=0.14 Score=44.11 Aligned_cols=71 Identities=4% Similarity=-0.070 Sum_probs=50.0
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEE-EEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhh-c-cCCccEEEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRV-VCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLS-H-FREADFVLI 117 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v-~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~-l-~~~fD~Vfi 117 (211)
+-+++|+| ||+|-.++.+..+-- ..-.| .++|+|+.+.+..+.|+... ++++|..++... + ...+|+++.
T Consensus 10 ~~~vidLF-aG~GG~~~G~~~aG~-~~~~v~~a~e~d~~a~~ty~~N~~~~-----~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFF-SGIGGLRSSYERSSI-NINATFIPFDINEIANKIYSKNFKEE-----VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEET-CTTTHHHHHHHHSSC-CCCEEEEEECCCHHHHHHHHHHHCCC-----CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCEEEEEC-CChhHHHHHHHHcCC-CceEEEEEEECCHHHHHHHHHHCCCC-----cccCChhhcCHHHhccCCCCEEEe
Confidence 45799995 999988887766420 01356 79999999999999998731 456777665332 1 237899986
Q ss_pred c
Q 041509 118 D 118 (211)
Q Consensus 118 D 118 (211)
.
T Consensus 83 g 83 (327)
T 3qv2_A 83 S 83 (327)
T ss_dssp C
T ss_pred c
Confidence 5
No 398
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.06 E-value=1.7 Score=35.11 Aligned_cols=103 Identities=15% Similarity=0.103 Sum_probs=64.1
Q ss_pred CCCeEEEEcccc----HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC-CCcEEEEEcchHHH------hhhc
Q 041509 40 NAQLMVVACANV----ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD-ASHVEFVIGDAQSL------LLSH 108 (211)
Q Consensus 40 ~~~~VLEi~Gtg----~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~-~~~V~~~~gda~e~------l~~l 108 (211)
+.+++|-. |++ .|. .+++.+...+.+|+.++.++...+.+++..+.. ..++.++..|..+. +...
T Consensus 6 ~~k~vlVT-Gasg~~GIG~---~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 6 EGRNIVVM-GVANKRSIAW---GIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp TTCEEEEE-CCCSTTSHHH---HHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred CCCEEEEE-cCCCCCcHHH---HHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence 46788888 643 554 344444344789999999987766666655522 33788998886432 1111
Q ss_pred ---cCCccEEEEcCCcC------------cH--------------HHHHHHHHhcCCCCcEEEEEec
Q 041509 109 ---FREADFVLIDCNLE------------NH--------------EGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 109 ---~~~fD~VfiD~~~~------------~y--------------~~~l~~~~~~L~pgG~viv~dn 146 (211)
.+++|.++..+... .. ....+.+.+.++++|.++..-.
T Consensus 82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 36899999875321 11 1245566777877777776543
No 399
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.92 E-value=0.25 Score=44.32 Aligned_cols=101 Identities=18% Similarity=0.202 Sum_probs=63.5
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-----C---------CCCcEEEEEcchHHHhhh
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-----L---------DASHVEFVIGDAQSLLLS 107 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-----~---------~~~~V~~~~gda~e~l~~ 107 (211)
-+|--| | .||.++.+|..+...+-+|+++|++++.++..++... + ...++++ ..|..+.+
T Consensus 9 ~~~~vI-G--lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~-- 82 (446)
T 4a7p_A 9 VRIAMI-G--TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV-- 82 (446)
T ss_dssp CEEEEE-C--CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH--
T ss_pred eEEEEE-c--CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH--
Confidence 345555 4 5777777777766556789999999998877655311 0 0123443 34554443
Q ss_pred ccCCccEEEEcCCcC-----------cHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 108 HFREADFVLIDCNLE-----------NHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 108 l~~~fD~VfiD~~~~-----------~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
...|+||+.-+.+ ...+.++.+.+.|++ |.++|......++
T Consensus 83 --~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~-g~iVV~~STv~pg 134 (446)
T 4a7p_A 83 --KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTK-PSVIVTKSTVPVG 134 (446)
T ss_dssp --TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCS-CCEEEECSCCCTT
T ss_pred --hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCC-CCEEEEeCCCCch
Confidence 3579999873222 246778888888987 6666655555565
No 400
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.81 E-value=0.18 Score=40.98 Aligned_cols=87 Identities=11% Similarity=0.177 Sum_probs=55.0
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCc----EEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 43 LMVVACANVANATTLALAAAAHQTGG----RVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g----~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
+|.=| |+| ..+..++..+...+- +|+.+|.+++.++.+++.+. ++ ...+..+.+. ..|+||+-
T Consensus 4 ~i~iI-G~G--~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g-----~~-~~~~~~e~~~----~aDvVila 70 (247)
T 3gt0_A 4 QIGFI-GCG--NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYG-----LT-TTTDNNEVAK----NADILILS 70 (247)
T ss_dssp CEEEE-CCS--HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHC-----CE-ECSCHHHHHH----HCSEEEEC
T ss_pred eEEEE-Ccc--HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhC-----CE-EeCChHHHHH----hCCEEEEE
Confidence 56777 754 445555555543233 89999999998877665432 11 2334455443 37999998
Q ss_pred CCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 119 CNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
.......+.++.+.+.++| |.+++
T Consensus 71 v~~~~~~~v~~~l~~~l~~-~~~vv 94 (247)
T 3gt0_A 71 IKPDLYASIINEIKEIIKN-DAIIV 94 (247)
T ss_dssp SCTTTHHHHC---CCSSCT-TCEEE
T ss_pred eCHHHHHHHHHHHHhhcCC-CCEEE
Confidence 8766788888888888887 55555
No 401
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.74 E-value=0.16 Score=42.83 Aligned_cols=89 Identities=17% Similarity=0.126 Sum_probs=58.5
Q ss_pred eEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchH--HHhhhc-cCCccEEEE
Q 041509 43 LMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQ--SLLLSH-FREADFVLI 117 (211)
Q Consensus 43 ~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~--e~l~~l-~~~fD~Vfi 117 (211)
+||-+ | .+.|..++.+|++. +.+|++++.+++..+.+++. . .+.+ +.-+-. +.+..+ .+.+|+||-
T Consensus 153 ~VlV~-Ga~G~vG~~~~q~a~~~---Ga~vi~~~~~~~~~~~~~~l-G--a~~v--~~~~~~~~~~~~~~~~~~~d~vid 223 (330)
T 1tt7_A 153 SVLVT-GATGGVGGIAVSMLNKR---GYDVVASTGNREAADYLKQL-G--ASEV--ISREDVYDGTLKALSKQQWQGAVD 223 (330)
T ss_dssp CEEEE-STTSHHHHHHHHHHHHH---TCCEEEEESSSSTHHHHHHH-T--CSEE--EEHHHHCSSCCCSSCCCCEEEEEE
T ss_pred eEEEE-CCCCHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHc-C--CcEE--EECCCchHHHHHHhhcCCccEEEE
Confidence 79999 6 57888888888876 56899999999888888753 2 1221 211111 111212 347998874
Q ss_pred cCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 118 DCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 118 D~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.... +.++.+.+.|+++|.++++
T Consensus 224 ~~g~----~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 224 PVGG----KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp SCCT----HHHHHHHTTEEEEEEEEEC
T ss_pred CCcH----HHHHHHHHhhcCCCEEEEE
Confidence 4432 3577888889998887664
No 402
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.64 E-value=0.67 Score=38.88 Aligned_cols=94 Identities=16% Similarity=0.080 Sum_probs=60.0
Q ss_pred HhhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH-HhhhccCCc
Q 041509 36 AAGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS-LLLSHFREA 112 (211)
Q Consensus 36 ~~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e-~l~~l~~~f 112 (211)
+...+.++||-+ | .+.|..++.+|++. +.+|+++.. ++..+.+++. +. +. ++.-+..+ .... ...+
T Consensus 148 ~~~~~g~~vlV~-Ga~G~vG~~a~q~a~~~---Ga~vi~~~~-~~~~~~~~~l--Ga-~~--~i~~~~~~~~~~~-~~g~ 216 (321)
T 3tqh_A 148 AEVKQGDVVLIH-AGAGGVGHLAIQLAKQK---GTTVITTAS-KRNHAFLKAL--GA-EQ--CINYHEEDFLLAI-STPV 216 (321)
T ss_dssp TTCCTTCEEEES-STTSHHHHHHHHHHHHT---TCEEEEEEC-HHHHHHHHHH--TC-SE--EEETTTSCHHHHC-CSCE
T ss_pred cCCCCCCEEEEE-cCCcHHHHHHHHHHHHc---CCEEEEEec-cchHHHHHHc--CC-CE--EEeCCCcchhhhh-ccCC
Confidence 456678899988 5 67788888888875 568998874 4446666653 22 21 22222222 2222 3579
Q ss_pred cEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 113 DFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 113 D~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
|+||-.... ..++.+.+.|+++|.++..
T Consensus 217 D~v~d~~g~----~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 217 DAVIDLVGG----DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEESSCH----HHHHHHGGGEEEEEEEEEC
T ss_pred CEEEECCCc----HHHHHHHHhccCCCEEEEe
Confidence 988744332 2347788899998887764
No 403
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.50 E-value=0.33 Score=44.04 Aligned_cols=71 Identities=15% Similarity=0.099 Sum_probs=51.2
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCc-EEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhh--------------
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGG-RVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLL-------------- 106 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~-------------- 106 (211)
-+++|+| ||+|-.++.+-.+ +. .|.++|+|+.+.+..+.|+... ....++++|+.++..
T Consensus 89 ~~viDLF-aG~GGlslG~~~a----G~~~v~avE~d~~A~~ty~~N~~~~-p~~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 89 FRFIDLF-AGIGGIRRGFESI----GGQCVFTSEWNKHAVRTYKANHYCD-PATHHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp EEEEEES-CTTSHHHHHHHTT----TEEEEEEECCCHHHHHHHHHHSCCC-TTTCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred ceEEEec-CCccHHHHHHHHC----CCEEEEEEeCCHHHHHHHHHhcccC-CCcceeccchhhhhhccccccchhhHHhh
Confidence 3699996 9999877777643 33 4899999999999999998521 123467799887752
Q ss_pred --hccCCccEEEEc
Q 041509 107 --SHFREADFVLID 118 (211)
Q Consensus 107 --~l~~~fD~VfiD 118 (211)
.....+|+++..
T Consensus 163 i~~~~~~~Dvl~gG 176 (482)
T 3me5_A 163 IRQHIPEHDVLLAG 176 (482)
T ss_dssp HHHHSCCCSEEEEE
T ss_pred hhhcCCCCCEEEec
Confidence 123578999865
No 404
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.43 E-value=0.39 Score=34.61 Aligned_cols=93 Identities=15% Similarity=0.141 Sum_probs=54.6
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH--Hhhhc-cCCccEEEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS--LLLSH-FREADFVLI 117 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l-~~~fD~Vfi 117 (211)
.++|+-+ |+ |..+..++..+...+.+|+.+|.+++..+.+++ ....++.+|..+ .+... .+.+|+|++
T Consensus 6 ~~~v~I~-G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~------~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 76 (144)
T 2hmt_A 6 NKQFAVI-GL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS------YATHAVIANATEENELLSLGIRNFEYVIV 76 (144)
T ss_dssp CCSEEEE-CC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT------TCSEEEECCTTCHHHHHTTTGGGCSEEEE
T ss_pred CCcEEEE-CC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH------hCCEEEEeCCCCHHHHHhcCCCCCCEEEE
Confidence 3568888 75 677777777765556789999999876543321 123556777643 33322 357899998
Q ss_pred cCCcC-cHHHHHHHHHhcCCCCcEEEE
Q 041509 118 DCNLE-NHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 118 D~~~~-~y~~~l~~~~~~L~pgG~viv 143 (211)
..... ..........+.+.++ .+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~-~ii~ 102 (144)
T 2hmt_A 77 AIGANIQASTLTTLLLKELDIP-NIWV 102 (144)
T ss_dssp CCCSCHHHHHHHHHHHHHTTCS-EEEE
T ss_pred CCCCchHHHHHHHHHHHHcCCC-eEEE
Confidence 77643 2222233333345554 4443
No 405
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=92.43 E-value=0.37 Score=41.20 Aligned_cols=98 Identities=8% Similarity=-0.015 Sum_probs=56.4
Q ss_pred hhCCC-CeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhH----HHHHHHHhcCCCCcEEEEE---cchHHHhh
Q 041509 37 AGNNA-QLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEE----YKLSKKILGLDASHVEFVI---GDAQSLLL 106 (211)
Q Consensus 37 ~~~~~-~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~----~~~Ar~~~~~~~~~V~~~~---gda~e~l~ 106 (211)
...+. ++||-+ | .++|..++.+|++. +.+++++..+++. .+.+++ + |...-+.... .|..+.+.
T Consensus 163 ~~~~g~~~VlV~-Ga~G~vG~~aiqlak~~---Ga~vi~~~~~~~~~~~~~~~~~~-l-Ga~~vi~~~~~~~~~~~~~i~ 236 (364)
T 1gu7_A 163 KLTPGKDWFIQN-GGTSAVGKYASQIGKLL---NFNSISVIRDRPNLDEVVASLKE-L-GATQVITEDQNNSREFGPTIK 236 (364)
T ss_dssp CCCTTTCEEEES-CTTSHHHHHHHHHHHHH---TCEEEEEECCCTTHHHHHHHHHH-H-TCSEEEEHHHHHCGGGHHHHH
T ss_pred ccCCCCcEEEEC-CCCcHHHHHHHHHHHHC---CCEEEEEecCccccHHHHHHHHh-c-CCeEEEecCccchHHHHHHHH
Confidence 34456 889988 6 57888888898876 5688777655543 344432 2 3211111111 23333333
Q ss_pred hc----cCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 107 SH----FREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 107 ~l----~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
++ .+.+|+||-..... . ...+.+.|+++|.++.+
T Consensus 237 ~~t~~~~~g~Dvvid~~G~~---~-~~~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 237 EWIKQSGGEAKLALNCVGGK---S-STGIARKLNNNGLMLTY 274 (364)
T ss_dssp HHHHHHTCCEEEEEESSCHH---H-HHHHHHTSCTTCEEEEC
T ss_pred HHhhccCCCceEEEECCCch---h-HHHHHHHhccCCEEEEe
Confidence 22 34799987444321 2 23567889999987764
No 406
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.26 E-value=0.52 Score=41.73 Aligned_cols=101 Identities=14% Similarity=0.071 Sum_probs=59.7
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC--------------CCcEEEEEcchHHHhhhc
Q 041509 43 LMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD--------------ASHVEFVIGDAQSLLLSH 108 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~--------------~~~V~~~~gda~e~l~~l 108 (211)
+|.-| |+ ||.+..+|..+...+-+|+.+|.+++.++..++.-... ..++++ ..|..+.+.
T Consensus 2 kI~VI-G~--G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~-- 75 (436)
T 1mv8_A 2 RISIF-GL--GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVL-- 75 (436)
T ss_dssp EEEEE-CC--STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHH--
T ss_pred EEEEE-CC--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhc--
Confidence 35556 64 55555655555444668999999999887665421100 123443 344444433
Q ss_pred cCCccEEEEcCCcCc----------HHHHHHHHHhcCCCC--cEEEEEecCCCCC
Q 041509 109 FREADFVLIDCNLEN----------HEGVLRAVQAGNKPN--GAVVVGYNAFRKG 151 (211)
Q Consensus 109 ~~~fD~VfiD~~~~~----------y~~~l~~~~~~L~pg--G~viv~dn~~~~~ 151 (211)
..|+||+.-.... ..+.++.+.+.++++ |.+++.......+
T Consensus 76 --~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g 128 (436)
T 1mv8_A 76 --DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPG 128 (436)
T ss_dssp --TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTT
T ss_pred --cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCC
Confidence 5799999865432 677888888878762 4555533233344
No 407
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=92.14 E-value=1.3 Score=38.02 Aligned_cols=109 Identities=15% Similarity=0.064 Sum_probs=71.0
Q ss_pred HhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-C---------------------CCCc
Q 041509 36 AAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-L---------------------DASH 93 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~---------------------~~~~ 93 (211)
++..+...||.+ |||....+..|.... .+.+++-||. |+.++.-++.+. . ..++
T Consensus 93 l~~~~~~qVV~L-GaGlDTr~~RL~~~~--~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 168 (334)
T 1rjd_A 93 LVANEKVQVVNL-GCGSDLRMLPLLQMF--PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGR 168 (334)
T ss_dssp HHHCSSEEEEEE-TCTTCCTHHHHHHHC--TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSS
T ss_pred HHHCCCcEEEEe-CCCCccHHHHhcCcC--CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCc
Confidence 333456779999 999998888887543 2567777777 888887777765 2 1478
Q ss_pred EEEEEcchHHH------hhhcc--CCccEEEEcCC-----cCcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 94 VEFVIGDAQSL------LLSHF--READFVLIDCN-----LENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 94 V~~~~gda~e~------l~~l~--~~fD~VfiD~~-----~~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
.+++..|..+. +.... +...+++..+- .+...+.++.+.... |+|.+++.|-+..
T Consensus 169 ~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 169 YKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp EEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred eEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 99999998653 22221 34566666553 234466777776655 6677776665433
No 408
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.02 E-value=2 Score=34.90 Aligned_cols=105 Identities=9% Similarity=0.063 Sum_probs=65.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCC------------hhHHHHHHHHhcCCCCcEEEEEcchHHH--
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRR------------VEEYKLSKKILGLDASHVEFVIGDAQSL-- 104 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~------------~~~~~~Ar~~~~~~~~~V~~~~gda~e~-- 104 (211)
.+.+++|-. |.+.| .+..+++.+...+.+|+.++.+ .+..+.+...+.....++.++..|..+.
T Consensus 8 l~gk~vlVT-Gas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 8 VQDKVVLVT-GGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTTCEEEEE-TTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred cCCCEEEEe-CCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence 356788988 76444 3455666655557899999987 5555555555552346789999886542
Q ss_pred ----hhhc---cCCccEEEEcCCcC---------cH-----------HHHHHHHHhcCCCCcEEEEEe
Q 041509 105 ----LLSH---FREADFVLIDCNLE---------NH-----------EGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 105 ----l~~l---~~~fD~VfiD~~~~---------~y-----------~~~l~~~~~~L~pgG~viv~d 145 (211)
+... .+++|.++..+... ++ ....+.+.+.++++|.++..-
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 1111 35899999876421 11 234456677777777776543
No 409
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=91.99 E-value=0.63 Score=40.52 Aligned_cols=95 Identities=18% Similarity=0.103 Sum_probs=66.2
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCC-CcEEEEEcchHHHhhhccCCccEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDA-SHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~-~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
...+||-+ +-..|..|++|+. ..++.+.-+--.....+.|++ ++. +.|++... . ..+...||+|+
T Consensus 38 ~~~~~~~~-~d~~gal~~~~~~------~~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~---~~~~~~~~~v~ 105 (375)
T 4dcm_A 38 IRGPVLIL-NDAFGALSCALAE------HKPYSIGDSYISELATRENLRLNGIDESSVKFLDS--T---ADYPQQPGVVL 105 (375)
T ss_dssp CCSCEEEE-CCSSSHHHHHTGG------GCCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--T---SCCCSSCSEEE
T ss_pred CCCCEEEE-CCCCCHHHHhhcc------CCceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--c---cccccCCCEEE
Confidence 34679999 9999999888863 245666555555556777887 443 34665433 2 22357899999
Q ss_pred EcCCcC--cHHHHHHHHHhcCCCCcEEEEEec
Q 041509 117 IDCNLE--NHEGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 117 iD~~~~--~y~~~l~~~~~~L~pgG~viv~dn 146 (211)
+--++. .....+..+...|.||+.++++..
T Consensus 106 ~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 106 IKVPKTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp EECCSCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred EEcCCCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 988776 456778888889999888776553
No 410
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.92 E-value=0.73 Score=39.33 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=36.0
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCCh---hHHHHHHHHhc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRV---EEYKLSKKILG 88 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~---~~~~~Ar~~~~ 88 (211)
.+...|||-+ ||+|.+++.... + +-+.+++|++| +..+.|++++.
T Consensus 241 ~~~~~vlDpF-~GsGtt~~aa~~-~---~r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 241 HPGSTVLDFF-AGSGVTARVAIQ-E---GRNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp CTTCEEEETT-CTTCHHHHHHHH-H---TCEEEEEESSTHHHHHHHHHHHHC-
T ss_pred CCCCEEEecC-CCCCHHHHHHHH-c---CCcEEEEECCccHHHHHHHHHHHHH
Confidence 5678899995 999976554443 3 57899999999 99999999987
No 411
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.69 E-value=0.73 Score=41.21 Aligned_cols=104 Identities=18% Similarity=0.224 Sum_probs=64.0
Q ss_pred hhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC------------CCcEEEEEcchHHH
Q 041509 37 AGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD------------ASHVEFVIGDAQSL 104 (211)
Q Consensus 37 ~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~------------~~~V~~~~gda~e~ 104 (211)
+..+-.+|--| |+ ||.+..+|..+.. +-+|+.+|++++.++..++..... ..++++ ..|..+.
T Consensus 32 r~~~~mkIaVI-Gl--G~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea 106 (432)
T 3pid_A 32 RGSEFMKITIS-GT--GYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDA 106 (432)
T ss_dssp ---CCCEEEEE-CC--SHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHH
T ss_pred cccCCCEEEEE-Cc--CHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHH
Confidence 33344567777 65 6777777777766 779999999999888776532100 123433 3444444
Q ss_pred hhhccCCccEEEEcCCcC-----------cHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 105 LLSHFREADFVLIDCNLE-----------NHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 105 l~~l~~~fD~VfiD~~~~-----------~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
+ ...|+||+.-+.. ......+.+.+ |+| |.++|......++
T Consensus 107 ~----~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~-g~iVV~~STv~pg 158 (432)
T 3pid_A 107 Y----RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INP-NAVMIIKSTIPVG 158 (432)
T ss_dssp H----TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCT-TSEEEECSCCCTT
T ss_pred H----hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCC-CcEEEEeCCCChH
Confidence 3 3579999865432 23566777888 887 5666645555565
No 412
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.65 E-value=1.1 Score=37.14 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=61.6
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc---------C-C-C--------CcEEEEEcch
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG---------L-D-A--------SHVEFVIGDA 101 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~---------~-~-~--------~~V~~~~gda 101 (211)
-++|.=| |+|. .+..+|..+...+-+|+.+|.+++.++.+++.+. + . . .++++ ..|.
T Consensus 4 ~~kV~VI-GaG~--mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~ 79 (283)
T 4e12_A 4 ITNVTVL-GTGV--LGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDL 79 (283)
T ss_dssp CCEEEEE-CCSH--HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCH
T ss_pred CCEEEEE-CCCH--HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCH
Confidence 3678888 8764 4444444443346799999999999888877642 1 0 0 12332 3343
Q ss_pred HHHhhhccCCccEEEEcCCcC--cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 102 QSLLLSHFREADFVLIDCNLE--NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 102 ~e~l~~l~~~fD~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
.+. -...|+|+.-.... .....++.+.+.++| +.+++ +|..
T Consensus 80 ~~~----~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~-~~il~-s~tS 122 (283)
T 4e12_A 80 AQA----VKDADLVIEAVPESLDLKRDIYTKLGELAPA-KTIFA-TNSS 122 (283)
T ss_dssp HHH----TTTCSEEEECCCSCHHHHHHHHHHHHHHSCT-TCEEE-ECCS
T ss_pred HHH----hccCCEEEEeccCcHHHHHHHHHHHHhhCCC-CcEEE-ECCC
Confidence 333 24689999876544 456788888888887 66554 6543
No 413
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.61 E-value=0.68 Score=40.07 Aligned_cols=96 Identities=13% Similarity=0.159 Sum_probs=55.1
Q ss_pred CCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 39 NNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 39 ~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
.++++|+-+ |+| +|..++.++.+ .+.+|+.+|.+++..+.+++.+. ..+.....+..+. .+.-..+|+|+.
T Consensus 164 l~~~~V~Vi-GaG~iG~~~a~~l~~---~Ga~V~~~d~~~~~~~~~~~~~g---~~~~~~~~~~~~l-~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVIL-GGGTVGTNAAKIALG---MGAQVTILDVNHKRLQYLDDVFG---GRVITLTATEANI-KKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEE-CCSHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHTT---TSEEEEECCHHHH-HHHHHHCSEEEE
T ss_pred CCCCEEEEE-CCCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHHhcC---ceEEEecCCHHHH-HHHHhCCCEEEE
Confidence 457889999 653 44444444444 36799999999988877765443 2243333333332 222246899987
Q ss_pred cCCcCc--HHH-HHHHHHhcCCCCcEEE
Q 041509 118 DCNLEN--HEG-VLRAVQAGNKPNGAVV 142 (211)
Q Consensus 118 D~~~~~--y~~-~l~~~~~~L~pgG~vi 142 (211)
...... ... ..+...+.++++|.++
T Consensus 236 ~~g~~~~~~~~li~~~~l~~mk~gg~iV 263 (369)
T 2eez_A 236 AVLVPGAKAPKLVTRDMLSLMKEGAVIV 263 (369)
T ss_dssp CCC-------CCSCHHHHTTSCTTCEEE
T ss_pred CCCCCccccchhHHHHHHHhhcCCCEEE
Confidence 654321 111 2456677788866543
No 414
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.50 E-value=0.43 Score=39.18 Aligned_cols=88 Identities=9% Similarity=0.040 Sum_probs=55.9
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCc--EEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccC-CccEEEEcC
Q 041509 43 LMVVACANVANATTLALAAAAHQTGG--RVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFR-EADFVLIDC 119 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g--~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~-~fD~VfiD~ 119 (211)
+|.=| |+ |..+..++..+...+- +|+.+|.+++..+.+++. +... ....|..+.+ . ..|+||+-.
T Consensus 3 ~I~iI-G~--G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~--g~~~---~~~~~~~~~~----~~~aDvVilav 70 (281)
T 2g5c_A 3 NVLIV-GV--GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL--GIID---EGTTSIAKVE----DFSPDFVMLSS 70 (281)
T ss_dssp EEEEE-SC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT--TSCS---EEESCGGGGG----GTCCSEEEECS
T ss_pred EEEEE-ec--CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC--CCcc---cccCCHHHHh----cCCCCEEEEcC
Confidence 56777 75 4555555555543333 799999999887766532 2211 1123433332 3 689999988
Q ss_pred CcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 120 NLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 120 ~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
......+.++.+.+.++++ .+++
T Consensus 71 p~~~~~~v~~~l~~~l~~~-~iv~ 93 (281)
T 2g5c_A 71 PVRTFREIAKKLSYILSED-ATVT 93 (281)
T ss_dssp CHHHHHHHHHHHHHHSCTT-CEEE
T ss_pred CHHHHHHHHHHHHhhCCCC-cEEE
Confidence 7766778888888888874 4444
No 415
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=91.48 E-value=0.7 Score=37.89 Aligned_cols=80 Identities=18% Similarity=0.160 Sum_probs=55.4
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHH---hhhc-------
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSL---LLSH------- 108 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~---l~~l------- 108 (211)
+.++||-. |++.| .+..+++.+...+.+|+.++.+++..+.+.+.+. ....++.++..|..+. +..+
T Consensus 11 ~~k~vlIT-Gas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVT-GGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEES-SCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEe-cCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 45778888 65444 3456666655557899999999988877777776 3345799999887543 1111
Q ss_pred cCCccEEEEcCCc
Q 041509 109 FREADFVLIDCNL 121 (211)
Q Consensus 109 ~~~fD~VfiD~~~ 121 (211)
.+++|.++..+..
T Consensus 89 ~g~iD~lv~nAg~ 101 (311)
T 3o26_A 89 FGKLDILVNNAGV 101 (311)
T ss_dssp HSSCCEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 3689999998763
No 416
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=91.48 E-value=0.52 Score=36.28 Aligned_cols=72 Identities=11% Similarity=0.073 Sum_probs=44.8
Q ss_pred ccHHHHHH--HHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcch---HHHhhhccCCccEEEEcCCcCc
Q 041509 50 NVANATTL--ALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDA---QSLLLSHFREADFVLIDCNLEN 123 (211)
Q Consensus 50 tg~G~stl--~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda---~e~l~~l~~~fD~VfiD~~~~~ 123 (211)
.|+|-+|+ .||..+...+.+|..||.||..-.. ..+......+.++..+. .+.+..+.+.||+|++|++...
T Consensus 11 gG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~yD~viiD~~~~~ 87 (206)
T 4dzz_A 11 GGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLT--NWSKAGKAAFDVFTAASEKDVYGIRKDLADYDFAIVDGAGSL 87 (206)
T ss_dssp TTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHH--HHHTTSCCSSEEEECCSHHHHHTHHHHTTTSSEEEEECCSSS
T ss_pred CCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHH--HHHhcCCCCCcEEecCcHHHHHHHHHhcCCCCEEEEECCCCC
Confidence 45565554 4666665556799999999875322 22332233466666554 2334444678999999998664
No 417
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.37 E-value=0.39 Score=39.39 Aligned_cols=87 Identities=13% Similarity=0.080 Sum_probs=56.5
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCCcC
Q 041509 43 LMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCNLE 122 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~~ 122 (211)
+|.=| |+ |..+..++..+...+-+|+.+|.+++..+.+++. +...+ ...|.. .. ...|+|++.....
T Consensus 2 ~i~ii-G~--G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~--g~~~~---~~~~~~----~~-~~~D~vi~av~~~ 68 (279)
T 2f1k_A 2 KIGVV-GL--GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER--QLVDE---AGQDLS----LL-QTAKIIFLCTPIQ 68 (279)
T ss_dssp EEEEE-CC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--TSCSE---EESCGG----GG-TTCSEEEECSCHH
T ss_pred EEEEE-cC--cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhC--CCCcc---ccCCHH----Hh-CCCCEEEEECCHH
Confidence 46667 65 5555566655544355899999999887766431 22111 123332 23 5689999988876
Q ss_pred cHHHHHHHHHhcCCCCcEEEE
Q 041509 123 NHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 123 ~y~~~l~~~~~~L~pgG~viv 143 (211)
...+.++.+.+.++| |.+++
T Consensus 69 ~~~~~~~~l~~~~~~-~~~vv 88 (279)
T 2f1k_A 69 LILPTLEKLIPHLSP-TAIVT 88 (279)
T ss_dssp HHHHHHHHHGGGSCT-TCEEE
T ss_pred HHHHHHHHHHhhCCC-CCEEE
Confidence 678888888888887 55555
No 418
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.31 E-value=2.3 Score=35.09 Aligned_cols=104 Identities=10% Similarity=0.108 Sum_probs=64.9
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhH-HHHHHHHhcCCCCcEEEEEcchHHH------hhh---cc
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEE-YKLSKKILGLDASHVEFVIGDAQSL------LLS---HF 109 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~-~~~Ar~~~~~~~~~V~~~~gda~e~------l~~---l~ 109 (211)
+.+++|-. |.+.| .+..+++.+...+.+|+.++.+++. .+.+.+.++....++.++.+|..+. +.. ..
T Consensus 46 ~gk~vlVT-Gas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLIT-GGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEE-TTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEe-CCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45788988 75544 3456666665557899999988753 4444444443346799999997542 111 13
Q ss_pred CCccEEEEcCCcC------------cH-----------HHHHHHHHhcCCCCcEEEEEe
Q 041509 110 READFVLIDCNLE------------NH-----------EGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 110 ~~fD~VfiD~~~~------------~y-----------~~~l~~~~~~L~pgG~viv~d 145 (211)
+++|.++..+... ++ ....+.+.+.++.+|.++..-
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 6899999875311 11 234556677777777766543
No 419
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.27 E-value=0.31 Score=41.23 Aligned_cols=100 Identities=15% Similarity=0.095 Sum_probs=60.2
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHH-hc--C-CCCcEEEE----EcchHHHhhhccCCcc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKI-LG--L-DASHVEFV----IGDAQSLLLSHFREAD 113 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~-~~--~-~~~~V~~~----~gda~e~l~~l~~~fD 113 (211)
.+|+=| |+|. .+..+|..+...+-.|+.++.++. +..+++ +. . ....+++. ..|.. ...+.+|
T Consensus 3 mkI~Ii-GaGa--iG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~----~~~~~~D 73 (320)
T 3i83_A 3 LNILVI-GTGA--IGSFYGALLAKTGHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAA----ELETKPD 73 (320)
T ss_dssp CEEEEE-SCCH--HHHHHHHHHHHTTCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGG----GCSSCCS
T ss_pred CEEEEE-CcCH--HHHHHHHHHHhCCCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHH----HcCCCCC
Confidence 467778 7654 333444444333568999999872 444332 21 1 22333331 22222 2234799
Q ss_pred EEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 114 FVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 114 ~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
+||+-.......+.++.+.+.+.++..++.+-|-+..
T Consensus 74 lVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~ 110 (320)
T 3i83_A 74 CTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDI 110 (320)
T ss_dssp EEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSC
T ss_pred EEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCCh
Confidence 9999877666778899999999886666666676654
No 420
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=91.25 E-value=0.56 Score=40.13 Aligned_cols=99 Identities=11% Similarity=0.101 Sum_probs=59.2
Q ss_pred HhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEc-c-hHHHhhhc-cC-C
Q 041509 36 AAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIG-D-AQSLLLSH-FR-E 111 (211)
Q Consensus 36 ~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~g-d-a~e~l~~l-~~-~ 111 (211)
+...+.++||-+++.++|..++.+|++.. +.+|++++.+++..+.+++. . .+. ++.- + ..+.+.++ .+ .
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~--Ga~Vi~~~~~~~~~~~~~~l-G--a~~--vi~~~~~~~~~v~~~~~g~g 254 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT--PATVIALDVKEEKLKLAERL-G--ADH--VVDARRDPVKQVMELTRGRG 254 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC--CCEEEEEESSHHHHHHHHHT-T--CSE--EEETTSCHHHHHHHHTTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEeCCHHHHHHHHHh-C--CCE--EEeccchHHHHHHHHhCCCC
Confidence 44566789999922466777777887651 46899999999999888742 2 121 1211 1 22333333 23 7
Q ss_pred ccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 112 ADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 112 fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
+|+||-..... ....++.+.+. ++|.++..
T Consensus 255 ~Dvvid~~G~~-~~~~~~~~~~~--~~G~~v~~ 284 (359)
T 1h2b_A 255 VNVAMDFVGSQ-ATVDYTPYLLG--RMGRLIIV 284 (359)
T ss_dssp EEEEEESSCCH-HHHHHGGGGEE--EEEEEEEC
T ss_pred CcEEEECCCCc-hHHHHHHHhhc--CCCEEEEE
Confidence 99997443322 11156666665 67877654
No 421
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.17 E-value=0.61 Score=40.93 Aligned_cols=98 Identities=16% Similarity=0.117 Sum_probs=60.8
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC------------CCcEEEEEcchHHHhhhccC
Q 041509 43 LMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD------------ASHVEFVIGDAQSLLLSHFR 110 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~------------~~~V~~~~gda~e~l~~l~~ 110 (211)
+|.-| |+ ||.+..+|..+.. +-+|+.+|.+++.++..++.-... ..++++ ..|..+.+.
T Consensus 2 kI~VI-G~--G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~~---- 72 (402)
T 1dlj_A 2 KIAVA-GS--GYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAYK---- 72 (402)
T ss_dssp EEEEE-CC--SHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHH----
T ss_pred EEEEE-CC--CHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEE-eCCHHHHhc----
Confidence 35556 54 7888888888876 778999999998777654321100 112332 334434333
Q ss_pred CccEEEEcCCcC-----------cHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 111 EADFVLIDCNLE-----------NHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 111 ~fD~VfiD~~~~-----------~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
..|+||+.-... ...+.++.+.+ ++| |.+++.......+
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~-~~iVV~~ST~~~g 122 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNS-HATLIIKSTIPIG 122 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCS-SCEEEECSCCCTT
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCC-CCEEEEeCCCCcc
Confidence 479999976544 25777888888 887 5666633333444
No 422
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.94 E-value=1.6 Score=36.41 Aligned_cols=107 Identities=17% Similarity=0.134 Sum_probs=66.6
Q ss_pred HHHhhCCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH------hhh
Q 041509 34 ALAAGNNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL------LLS 107 (211)
Q Consensus 34 ~l~~~~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~~ 107 (211)
.+....+.|.+|-. |.+.|. +..+|+.+...+.+|+.++.+++.++.+.+.+. .++..+..|..+. ...
T Consensus 22 ~Ms~rL~gKvalVT-Gas~GI-G~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g---~~~~~~~~Dv~~~~~v~~~~~~ 96 (273)
T 4fgs_A 22 SMTQRLNAKIAVIT-GATSGI-GLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG---GGAVGIQADSANLAELDRLYEK 96 (273)
T ss_dssp ---CTTTTCEEEEE-SCSSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTCEEEECCTTCHHHHHHHHHH
T ss_pred hhcchhCCCEEEEe-CcCCHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---CCeEEEEecCCCHHHHHHHHHH
Confidence 33334567888998 776664 355555555568999999999998877665553 3466677775432 111
Q ss_pred ---ccCCccEEEEcCCc-----------CcH-----------HHHHHHHHhcCCCCcEEEEEe
Q 041509 108 ---HFREADFVLIDCNL-----------ENH-----------EGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 108 ---l~~~fD~VfiD~~~-----------~~y-----------~~~l~~~~~~L~pgG~viv~d 145 (211)
..++.|.++..+.. +++ -...+.+.+.|+.+|.++..-
T Consensus 97 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 97 VKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 15789999887521 111 233455567777777766543
No 423
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.87 E-value=3.9 Score=34.26 Aligned_cols=99 Identities=13% Similarity=0.154 Sum_probs=54.2
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-C--CCCcEEEEEcchHHHhhhccCCccEEEEcC
Q 041509 43 LMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-L--DASHVEFVIGDAQSLLLSHFREADFVLIDC 119 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~--~~~~V~~~~gda~e~l~~l~~~fD~VfiD~ 119 (211)
+|.-+ |+|.=.+++....+.....++|+.+|++++.++.....+. . +...+++..+|. +. -...|+|++-.
T Consensus 2 kI~VI-GaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~-~a----~~~aDvVIi~~ 75 (304)
T 2v6b_A 2 KVGVV-GTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH-SE----LADAQVVILTA 75 (304)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG-GG----GTTCSEEEECC
T ss_pred EEEEE-CCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH-HH----hCCCCEEEEcC
Confidence 56677 7755444444433332223489999999986653222222 2 122344444443 22 24679999986
Q ss_pred CcCc----------------HHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 120 NLEN----------------HEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 120 ~~~~----------------y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
.... ..++.+.+.+. .|++.++++.|..
T Consensus 76 ~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~ 119 (304)
T 2v6b_A 76 GANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPV 119 (304)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSH
T ss_pred CCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCch
Confidence 4321 25566666665 5778777766653
No 424
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=90.81 E-value=1.7 Score=36.62 Aligned_cols=92 Identities=16% Similarity=0.082 Sum_probs=60.3
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH--Hhhhc-cCCccEEEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS--LLLSH-FREADFVLI 117 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l-~~~fD~Vfi 117 (211)
.++|+=+ |+ |..+..+++.+...+- |+.+|.||+..+ +++ ..+.++.||+.+ .+.+. -+..|.+++
T Consensus 115 ~~~viI~-G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 115 SRHVVIC-GW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKANVRGARAVIV 183 (336)
T ss_dssp -CEEEEE-SC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred cCCEEEE-CC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhcChhhccEEEE
Confidence 3567777 65 7778888888866455 999999999887 653 247899999864 44433 468899998
Q ss_pred cCCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 118 DCNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 118 D~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
..+.....-..-...+.+.|...+++
T Consensus 184 ~~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 184 DLESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp CCSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred cCCccHHHHHHHHHHHHHCCCCeEEE
Confidence 76544332233334455666544443
No 425
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=90.74 E-value=1.4 Score=36.34 Aligned_cols=79 Identities=13% Similarity=0.041 Sum_probs=56.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH------hh---hcc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL------LL---SHF 109 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~---~l~ 109 (211)
.+.|.+|-. |.+.|. +..+|+.+...+.+|+.++.+++.++.+.+.++....++.++..|..+. .. +..
T Consensus 5 L~gKvalVT-Gas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 5 LKNKVVIVT-GAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GTTCEEEEE-TTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEe-CCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 367888988 776664 3555555555589999999999988888777773346788899986432 11 115
Q ss_pred CCccEEEEcC
Q 041509 110 READFVLIDC 119 (211)
Q Consensus 110 ~~fD~VfiD~ 119 (211)
++.|.++-.+
T Consensus 83 G~iDiLVNNA 92 (254)
T 4fn4_A 83 SRIDVLCNNA 92 (254)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 7899999775
No 426
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.70 E-value=1 Score=38.92 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=58.9
Q ss_pred CCCCeEEEEccc-cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 39 NNAQLMVVACAN-VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 39 ~~~~~VLEi~Gt-g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
.++++|+-+ |+ +.|..++.++.++ +.+|+.+|.+++.++.+++.... .+..+..+..+.... -..+|+|+-
T Consensus 165 l~~~~VlVi-GaGgvG~~aa~~a~~~---Ga~V~v~dr~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~DvVI~ 236 (361)
T 1pjc_A 165 VKPGKVVIL-GGGVVGTEAAKMAVGL---GAQVQIFDINVERLSYLETLFGS---RVELLYSNSAEIETA-VAEADLLIG 236 (361)
T ss_dssp BCCCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHGG---GSEEEECCHHHHHHH-HHTCSEEEE
T ss_pred CCCCEEEEE-CCCHHHHHHHHHHHhC---CCEEEEEeCCHHHHHHHHHhhCc---eeEeeeCCHHHHHHH-HcCCCEEEE
Confidence 356899999 65 4555555555554 56999999999988888765441 233333333232221 236899975
Q ss_pred cCCcCcH--HH-HHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 118 DCNLENH--EG-VLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 118 D~~~~~y--~~-~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
....+.. .. ..+...+.++|+|. ++ |-...++
T Consensus 237 ~~~~~~~~~~~li~~~~~~~~~~g~~-iv-dv~~~~g 271 (361)
T 1pjc_A 237 AVLVPGRRAPILVPASLVEQMRTGSV-IV-DVAVDQG 271 (361)
T ss_dssp CCCCTTSSCCCCBCHHHHTTSCTTCE-EE-ETTCTTC
T ss_pred CCCcCCCCCCeecCHHHHhhCCCCCE-EE-EEecCCC
Confidence 5432210 01 13445667888664 33 5444443
No 427
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.61 E-value=0.91 Score=38.29 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=61.4
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHH-hc--CCCCcE--EEE-EcchHHHhhhccCCcc
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKI-LG--LDASHV--EFV-IGDAQSLLLSHFREAD 113 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~-~~--~~~~~V--~~~-~gda~e~l~~l~~~fD 113 (211)
...+|.-| |+|. .+..+|..+...+-.|+.+ .+++.++..+++ +. ...... .+. ..|.. . ...+|
T Consensus 18 ~~~kI~Ii-GaGa--~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~----~-~~~~D 88 (318)
T 3hwr_A 18 QGMKVAIM-GAGA--VGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS----A-VQGAD 88 (318)
T ss_dssp --CEEEEE-SCSH--HHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG----G-GTTCS
T ss_pred cCCcEEEE-CcCH--HHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH----H-cCCCC
Confidence 34678888 7753 3344444443335689999 998887776654 11 111111 111 12221 1 25799
Q ss_pred EEEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 114 FVLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 114 ~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
+||+--......+.++.+.+.+.|+-.++.+-|-+..
T Consensus 89 ~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 89 LVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp EEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred EEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 9999887777888999999999886555555565543
No 428
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=90.31 E-value=1.7 Score=35.00 Aligned_cols=79 Identities=15% Similarity=0.193 Sum_probs=55.4
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH------hhhc---cC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL------LLSH---FR 110 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~~l---~~ 110 (211)
+.+++|-. |.+.| .+..+++.+...+.+|+.++.+++..+.+.+.++....++.++..|..+. +... .+
T Consensus 5 ~~k~vlVT-Gas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIIT-GGSSG-MGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEET-TTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEE-CCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45778888 65444 34566666655578999999999988888777764446799999986542 1111 36
Q ss_pred CccEEEEcCC
Q 041509 111 EADFVLIDCN 120 (211)
Q Consensus 111 ~fD~VfiD~~ 120 (211)
++|.++..+.
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 8999998764
No 429
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=90.22 E-value=1.8 Score=35.46 Aligned_cols=79 Identities=16% Similarity=0.105 Sum_probs=54.1
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH------hhh---ccC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL------LLS---HFR 110 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~~---l~~ 110 (211)
+.+++|-. |++.| .+..+++.+...+.+|+.++.+++..+.+.+.+.....++.++..|..+. +.. ..+
T Consensus 23 ~~k~~lVT-Gas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVT-GVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEE-STTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEe-CCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 55788988 75544 34556665555578999999999888777776663346799999986542 111 136
Q ss_pred CccEEEEcCC
Q 041509 111 EADFVLIDCN 120 (211)
Q Consensus 111 ~fD~VfiD~~ 120 (211)
++|.++..+.
T Consensus 101 ~id~lv~nAg 110 (279)
T 3sju_A 101 PIGILVNSAG 110 (279)
T ss_dssp SCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 8999998763
No 430
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.21 E-value=1 Score=38.03 Aligned_cols=87 Identities=14% Similarity=0.030 Sum_probs=56.4
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCC-cEEEEEeCChhH---HH-HHHHHhc-CCCCcEEEEEc-chHHHhhhccCCccE
Q 041509 42 QLMVVACANVANATTLALAAAAHQTG-GRVVCILRRVEE---YK-LSKKILG-LDASHVEFVIG-DAQSLLLSHFREADF 114 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~-g~v~tiE~~~~~---~~-~Ar~~~~-~~~~~V~~~~g-da~e~l~~l~~~fD~ 114 (211)
.+|.-| |+ |+.+..+|..+...+ -+|+.+|.+++. .+ .+++..+ +. .. +..+.+. ..|+
T Consensus 25 m~IgvI-G~--G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-------~~~s~~e~~~----~aDv 90 (317)
T 4ezb_A 25 TTIAFI-GF--GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-------EPLDDVAGIA----CADV 90 (317)
T ss_dssp CEEEEE-CC--SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-------EEESSGGGGG----GCSE
T ss_pred CeEEEE-Cc--cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-------CCCCHHHHHh----cCCE
Confidence 568888 75 667777777776655 699999999831 11 1111112 32 33 4444433 4799
Q ss_pred EEEcCCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 115 VLIDCNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 115 VfiD~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
||+--......+.++.+.+.++| |.+++
T Consensus 91 Vi~avp~~~~~~~~~~i~~~l~~-~~ivv 118 (317)
T 4ezb_A 91 VLSLVVGAATKAVAASAAPHLSD-EAVFI 118 (317)
T ss_dssp EEECCCGGGHHHHHHHHGGGCCT-TCEEE
T ss_pred EEEecCCHHHHHHHHHHHhhcCC-CCEEE
Confidence 99988777667777888888887 55665
No 431
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=90.14 E-value=0.5 Score=42.31 Aligned_cols=48 Identities=10% Similarity=-0.020 Sum_probs=38.8
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccC---CCcEEEEEeCChhHHHHHHHHhc
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQ---TGGRVVCILRRVEEYKLSKKILG 88 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~---~~g~v~tiE~~~~~~~~Ar~~~~ 88 (211)
.+-.|+|+ |.|.|..+.-+..+++. ...+++.||.+|.+.+.-++.+.
T Consensus 137 g~~~ivE~-GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 137 GTRRVMEF-GAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp TCCEEEEE-SCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCCeEEEe-CCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 35689999 99999998888776642 13489999999999888887775
No 432
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.12 E-value=2.3 Score=34.28 Aligned_cols=102 Identities=14% Similarity=0.142 Sum_probs=65.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHh--h-------hcc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLL--L-------SHF 109 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l--~-------~l~ 109 (211)
.+.+++|-. |.+.| .+..+++.+...+.+|+.++.+++.++...+.+. .++.++..|..+.- . +..
T Consensus 6 l~gk~~lVT-Gas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 6 YQGKKAIVI-GGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEFG---PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTTCEEEEE-TCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEE-CCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 356888988 76544 3456666665557899999999987776655542 46888888865421 1 113
Q ss_pred CCccEEEEcCCcC-----------cH-----------HHHHHHHHhcCCCCcEEEEEe
Q 041509 110 READFVLIDCNLE-----------NH-----------EGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 110 ~~fD~VfiD~~~~-----------~y-----------~~~l~~~~~~L~pgG~viv~d 145 (211)
+++|.++..+... ++ ....+.+.+.++++|.++..-
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 6899999875321 11 223455666666667766544
No 433
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.08 E-value=3.3 Score=31.97 Aligned_cols=71 Identities=15% Similarity=0.184 Sum_probs=49.8
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCCc
Q 041509 43 LMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCNL 121 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~ 121 (211)
+||-+ | ++|+.+..+++.+...+.+|+++..+++..... ....++++.+|..+.-....+.+|.||..+..
T Consensus 2 kilVt-G-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVL-G-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------LGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp EEEEE-T-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------TCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred EEEEE-c-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc------cCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 47777 5 467777888877765578999999998754322 13568899999876432234678999987644
No 434
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.07 E-value=1.5 Score=36.04 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=56.8
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHh-c--CCCCcE--EEEEcchHHHhhhccCCccEEE
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKIL-G--LDASHV--EFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~-~--~~~~~V--~~~~gda~e~l~~l~~~fD~Vf 116 (211)
.+|.=| |+ |..+..+|..+...+.+|+.+|.+++.++..++.- . ...... .+...+..+... .-...|+||
T Consensus 4 m~i~ii-G~--G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIA-GA--GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDH-QNEQVDLII 79 (316)
T ss_dssp CEEEEE-CC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCT-TSCCCSEEE
T ss_pred CeEEEE-Cc--CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcc-cCCCCCEEE
Confidence 368888 76 44555555555444568999999998877665541 1 000000 000001111111 013799999
Q ss_pred EcCCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 117 IDCNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 117 iD~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
+........+.++.+.+.++|+ .+++
T Consensus 80 ~~v~~~~~~~v~~~l~~~l~~~-~~iv 105 (316)
T 2ew2_A 80 ALTKAQQLDAMFKAIQPMITEK-TYVL 105 (316)
T ss_dssp ECSCHHHHHHHHHHHGGGCCTT-CEEE
T ss_pred EEeccccHHHHHHHHHHhcCCC-CEEE
Confidence 9887666788888888888874 4444
No 435
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.92 E-value=0.87 Score=39.61 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=54.5
Q ss_pred CCCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 39 NNAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 39 ~~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
.++++|+-+ |+| .|..++.++.++ +.+|+.+|.+++..+.+++.+.. .+.....+..+. .++-...|+|+.
T Consensus 166 l~g~~V~Vi-G~G~iG~~~a~~a~~~---Ga~V~~~d~~~~~l~~~~~~~g~---~~~~~~~~~~~l-~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVI-GAGTAGYNAARIANGM---GATVTVLDINIDKLRQLDAEFCG---RIHTRYSSAYEL-EGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTT---SSEEEECCHHHH-HHHHHHCSEEEE
T ss_pred CCCCEEEEE-CCCHHHHHHHHHHHhC---CCEEEEEeCCHHHHHHHHHhcCC---eeEeccCCHHHH-HHHHcCCCEEEE
Confidence 467889999 753 444444455543 66999999999988877765431 122222222222 222235899998
Q ss_pred cCCcCc--HHH-HHHHHHhcCCCCcEEE
Q 041509 118 DCNLEN--HEG-VLRAVQAGNKPNGAVV 142 (211)
Q Consensus 118 D~~~~~--y~~-~l~~~~~~L~pgG~vi 142 (211)
....+. ... ..+...+.++|||.++
T Consensus 238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV 265 (377)
T 2vhw_A 238 AVLVPGAKAPKLVSNSLVAHMKPGAVLV 265 (377)
T ss_dssp CCCCTTSCCCCCBCHHHHTTSCTTCEEE
T ss_pred CCCcCCCCCcceecHHHHhcCCCCcEEE
Confidence 542221 101 1345567788866443
No 436
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.82 E-value=1.7 Score=36.23 Aligned_cols=100 Identities=20% Similarity=0.128 Sum_probs=53.4
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCc--EEEEEeCChhHHHH-HHHHhcC--CCCcEEEEEc-chHHHhhhccCCcc
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGG--RVVCILRRVEEYKL-SKKILGL--DASHVEFVIG-DAQSLLLSHFREAD 113 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g--~v~tiE~~~~~~~~-Ar~~~~~--~~~~V~~~~g-da~e~l~~l~~~fD 113 (211)
++.+|.=| |+|.=. ..++..+...+- +|+.+|.+++.++. +...-++ ....+++... |. +. ....|
T Consensus 6 ~~mkI~Ii-GaG~vG--~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~----~~~aD 77 (319)
T 1lld_A 6 KPTKLAVI-GAGAVG--STLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EI----CRDAD 77 (319)
T ss_dssp -CCEEEEE-CCSHHH--HHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GG----GTTCS
T ss_pred CCCEEEEE-CCCHHH--HHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HH----hCCCC
Confidence 34678889 875433 333333322233 89999999876652 2221111 1123444433 32 22 24689
Q ss_pred EEEEcCCcCc----------------HHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 114 FVLIDCNLEN----------------HEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 114 ~VfiD~~~~~----------------y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
+|++-..... ..+..+.+.+. .|++.++++.|..
T Consensus 78 ~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~ 127 (319)
T 1lld_A 78 MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPV 127 (319)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSH
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCch
Confidence 9999763221 12566666664 6777776666643
No 437
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.66 E-value=0.91 Score=35.86 Aligned_cols=74 Identities=14% Similarity=0.183 Sum_probs=52.5
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcE-EEEEcchHHHhhhccCCccEEEEc
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHV-EFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V-~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
+.++||-+ | ++|+.+..+++.+...+.+|+.++.+++..+.... ..+ +++.+|..+.+....+.+|.||..
T Consensus 20 ~~~~ilVt-G-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ 91 (236)
T 3e8x_A 20 QGMRVLVV-G-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLEEDFSHAFASIDAVVFA 91 (236)
T ss_dssp -CCEEEEE-T-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred CCCeEEEE-C-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence 45789988 5 46777777777776557899999999886654332 257 888999864444445689999987
Q ss_pred CCc
Q 041509 119 CNL 121 (211)
Q Consensus 119 ~~~ 121 (211)
+..
T Consensus 92 ag~ 94 (236)
T 3e8x_A 92 AGS 94 (236)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 438
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.65 E-value=1.3 Score=39.45 Aligned_cols=91 Identities=9% Similarity=-0.044 Sum_probs=56.6
Q ss_pred cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC--------------CCcEEEEEcchHHHhhhccCCccEEE
Q 041509 51 VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD--------------ASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 51 g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~--------------~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
|.||.++.+|..+...+-+|+++|++++.++..++.-... ..++++-. | ...-|+||
T Consensus 18 GlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~tt-d--------~~~aDvvi 88 (431)
T 3ojo_A 18 GLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVST-T--------PEASDVFI 88 (431)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEES-S--------CCCCSEEE
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeC-c--------hhhCCEEE
Confidence 4567777777776655679999999999887765431100 12233321 2 12579999
Q ss_pred EcCCcC------------cHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 117 IDCNLE------------NHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 117 iD~~~~------------~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
+.-+.+ ......+.+.+.|++ |.++|......++
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~-g~iVV~~STV~pg 134 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKK-GNTIIVESTIAPK 134 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCT-TEEEEECSCCCTT
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCC-CCEEEEecCCChh
Confidence 863322 135566778888987 6677755566666
No 439
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.64 E-value=0.85 Score=39.54 Aligned_cols=91 Identities=7% Similarity=-0.005 Sum_probs=62.2
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCC
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCN 120 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~ 120 (211)
..+|.=| |+ |..+..+|..+...+-+|+.+|.+++.++.+.+. +. . ...+..+.+.. ....|+||+--.
T Consensus 22 ~mkIgiI-Gl--G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~--g~----~-~~~s~~e~~~~-a~~~DvVi~~vp 90 (358)
T 4e21_A 22 SMQIGMI-GL--GRMGADMVRRLRKGGHECVVYDLNVNAVQALERE--GI----A-GARSIEEFCAK-LVKPRVVWLMVP 90 (358)
T ss_dssp CCEEEEE-CC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT--TC----B-CCSSHHHHHHH-SCSSCEEEECSC
T ss_pred CCEEEEE-Cc--hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC--CC----E-EeCCHHHHHhc-CCCCCEEEEeCC
Confidence 3578888 75 5666666666655567899999999877665432 21 1 13455565553 346799999876
Q ss_pred cCcHHHHHHHHHhcCCCCcEEEE
Q 041509 121 LENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 121 ~~~y~~~l~~~~~~L~pgG~viv 143 (211)
.....+.++.+.+.|++ |.++|
T Consensus 91 ~~~v~~vl~~l~~~l~~-g~iiI 112 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAA-NDIVI 112 (358)
T ss_dssp GGGHHHHHHHHGGGCCT-TCEEE
T ss_pred HHHHHHHHHHHHhhCCC-CCEEE
Confidence 66677888889888887 55555
No 440
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=89.60 E-value=1.5 Score=35.37 Aligned_cols=79 Identities=10% Similarity=-0.002 Sum_probs=54.9
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH--hhhc------cCC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL--LLSH------FRE 111 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~--l~~l------~~~ 111 (211)
+.+++|-. |.+.|. +..+++.+...+.+|+.++.+++.++.+.+.++....++.++..|..+. +..+ .++
T Consensus 6 ~~k~vlVT-Gas~GI-G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVI-GAGDYI-GAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEE-CCSSHH-HHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEE-CCCchH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 55788888 765553 4556666555578999999999988877777763346799999986442 1111 168
Q ss_pred ccEEEEcCC
Q 041509 112 ADFVLIDCN 120 (211)
Q Consensus 112 fD~VfiD~~ 120 (211)
+|.++..+.
T Consensus 84 id~lv~nAg 92 (252)
T 3h7a_A 84 LEVTIFNVG 92 (252)
T ss_dssp EEEEEECCC
T ss_pred ceEEEECCC
Confidence 999998764
No 441
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=89.56 E-value=1.1 Score=38.30 Aligned_cols=81 Identities=15% Similarity=0.118 Sum_probs=46.4
Q ss_pred CCeEEEEcc-ccHHHHHHH--HHHHccCCCcEEEEEeCChhHHHH---HHHHhc-CCCCcEEEE-Ecc----h----HHH
Q 041509 41 AQLMVVACA-NVANATTLA--LAAAAHQTGGRVVCILRRVEEYKL---SKKILG-LDASHVEFV-IGD----A----QSL 104 (211)
Q Consensus 41 ~~~VLEi~G-tg~G~stl~--la~a~~~~~g~v~tiE~~~~~~~~---Ar~~~~-~~~~~V~~~-~gd----a----~e~ 104 (211)
++.|+=+ | .|+|-||+. ||..+.+.+++|.-+|.|...... .+...+ ....++.++ .+. . .+.
T Consensus 105 ~~vI~iv-G~~G~GKTT~~~~LA~~l~~~g~kVllid~D~~r~~a~~ql~~~~~~~~~~~l~vip~~~~~~~p~~~~~~~ 183 (320)
T 1zu4_A 105 LNIFMLV-GVNGTGKTTSLAKMANYYAELGYKVLIAAADTFRAGATQQLEEWIKTRLNNKVDLVKANKLNADPASVVFDA 183 (320)
T ss_dssp CEEEEEE-SSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCSCHHHHHHHHHHHTTTSCTTEEEECCSSTTCCHHHHHHHH
T ss_pred CeEEEEE-CCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHhccccCCceEEeCCCCCCCHHHHHHHH
Confidence 3345555 4 678888765 555555557899988888743221 112111 113457777 432 1 122
Q ss_pred hh-hccCCccEEEEcCCcC
Q 041509 105 LL-SHFREADFVLIDCNLE 122 (211)
Q Consensus 105 l~-~l~~~fD~VfiD~~~~ 122 (211)
+. .+...||+|++|.+..
T Consensus 184 l~~~~~~~yD~VIIDTpg~ 202 (320)
T 1zu4_A 184 IKKAKEQNYDLLLIDTAGR 202 (320)
T ss_dssp HHHHHHTTCSEEEEECCCC
T ss_pred HHHHHhcCCCEEEEcCCCc
Confidence 22 1247899999998765
No 442
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.54 E-value=1 Score=39.58 Aligned_cols=105 Identities=24% Similarity=0.162 Sum_probs=59.6
Q ss_pred CCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEE--EEEcch-----------HH
Q 041509 40 NAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVE--FVIGDA-----------QS 103 (211)
Q Consensus 40 ~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~--~~~gda-----------~e 103 (211)
++.+|+-+ |+| .|..++.++.++ +.+|+.+|.+++..+.+++ +. ...-.++ -..+.+ .+
T Consensus 183 ~~~kV~Vi-G~G~iG~~aa~~a~~l---Ga~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~ 257 (381)
T 3p2y_A 183 KPASALVL-GVGVAGLQALATAKRL---GAKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQQQQ 257 (381)
T ss_dssp CCCEEEEE-SCSHHHHHHHHHHHHH---TCEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHHHHH
T ss_pred CCCEEEEE-CchHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhhhHH
Confidence 67889999 776 566667777776 6799999999998888876 22 0000000 000111 12
Q ss_pred HhhhccCCccEEEEcC---CcCcHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 104 LLLSHFREADFVLIDC---NLENHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 104 ~l~~l~~~fD~VfiD~---~~~~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
.+.+.-...|+|+.-. ......=+.+...+.++| |.++| |-...+|
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~Mkp-GsVIV-DvA~d~G 306 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQP-GSVVV-DLAGETG 306 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCT-TCEEE-ETTGGGT
T ss_pred HHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCC-CcEEE-EEeCCCC
Confidence 2233346899998642 111110123556667787 66665 6655554
No 443
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.41 E-value=2.1 Score=34.11 Aligned_cols=79 Identities=18% Similarity=0.131 Sum_probs=55.5
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHh--hhc-------cC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLL--LSH-------FR 110 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l--~~l-------~~ 110 (211)
+.+++|-. |++.| .+..+++.+...+.+|+.++.+++..+...+.+.....++.++..|..+.- ..+ .+
T Consensus 8 ~~k~vlIT-Gas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVT-GSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEE-TTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEE-CCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 56788888 75444 456666666555789999999999887777766633467889999875421 111 35
Q ss_pred CccEEEEcCC
Q 041509 111 EADFVLIDCN 120 (211)
Q Consensus 111 ~fD~VfiD~~ 120 (211)
++|.++..+.
T Consensus 86 ~id~li~~Ag 95 (253)
T 3qiv_A 86 GIDYLVNNAA 95 (253)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 8999998764
No 444
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=89.39 E-value=0.98 Score=37.26 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=57.2
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCCc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCNL 121 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~ 121 (211)
.+|.=| |+ +|..+..++..+...+-+|+.+|.+++..+.+++ .+ ++. .+..+. -...|+||+-...
T Consensus 12 m~I~iI-G~-tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~--~g----~~~--~~~~~~----~~~aDvVi~av~~ 77 (286)
T 3c24_A 12 KTVAIL-GA-GGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG--MG----IPL--TDGDGW----IDEADVVVLALPD 77 (286)
T ss_dssp CEEEEE-TT-TSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH--TT----CCC--CCSSGG----GGTCSEEEECSCH
T ss_pred CEEEEE-CC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh--cC----CCc--CCHHHH----hcCCCEEEEcCCc
Confidence 468888 76 1455555555554445689999999988776654 12 111 132222 2468999998877
Q ss_pred CcHHHHHHHHHhcCCCCcEEEE
Q 041509 122 ENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 122 ~~y~~~l~~~~~~L~pgG~viv 143 (211)
....+.++.+.+.++| |.+++
T Consensus 78 ~~~~~v~~~l~~~l~~-~~ivv 98 (286)
T 3c24_A 78 NIIEKVAEDIVPRVRP-GTIVL 98 (286)
T ss_dssp HHHHHHHHHHGGGSCT-TCEEE
T ss_pred hHHHHHHHHHHHhCCC-CCEEE
Confidence 6678888888888877 55555
No 445
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=89.39 E-value=2.2 Score=34.50 Aligned_cols=79 Identities=16% Similarity=0.124 Sum_probs=54.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH------hhh---cc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL------LLS---HF 109 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~~---l~ 109 (211)
.+.+++|-. |.+.|. +..+++.+...+.+|+.++.+++.++.+.+.+.....++.++..|..+. +.. ..
T Consensus 9 l~~k~vlVT-Gas~gI-G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 9 LTDKVVVIS-GVGPAL-GTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTTCEEEEE-SCCTTH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCcEEEEE-CCCcHH-HHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 456888988 764443 3555555555578999999999888777776663346789999886542 111 14
Q ss_pred CCccEEEEcC
Q 041509 110 READFVLIDC 119 (211)
Q Consensus 110 ~~fD~VfiD~ 119 (211)
+++|.++..+
T Consensus 87 g~id~lv~nA 96 (264)
T 3ucx_A 87 GRVDVVINNA 96 (264)
T ss_dssp SCCSEEEECC
T ss_pred CCCcEEEECC
Confidence 6899999876
No 446
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=89.31 E-value=0.31 Score=43.85 Aligned_cols=102 Identities=18% Similarity=0.101 Sum_probs=59.3
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcC--------------CCCcEEEEEcchHHHhhh
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGL--------------DASHVEFVIGDAQSLLLS 107 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~--------------~~~~V~~~~gda~e~l~~ 107 (211)
.+|--| | .||.++-+|..+...+-+|+++|+|++.++.-++.-.. ...+++| ..|..+.+.
T Consensus 22 ~~IaVi-G--lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~-tt~~~~ai~- 96 (444)
T 3vtf_A 22 ASLSVL-G--LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSF-AESAEEAVA- 96 (444)
T ss_dssp CEEEEE-C--CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-CSSHHHHHH-
T ss_pred CEEEEE-c--cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeE-EcCHHHHHh-
Confidence 456666 5 56777776666654467999999999887765432110 0123333 233333332
Q ss_pred ccCCccEEEEcCCc----------CcHHHHHHHHHhcCCC--CcEEEEEecCCCCC
Q 041509 108 HFREADFVLIDCNL----------ENHEGVLRAVQAGNKP--NGAVVVGYNAFRKG 151 (211)
Q Consensus 108 l~~~fD~VfiD~~~----------~~y~~~l~~~~~~L~p--gG~viv~dn~~~~~ 151 (211)
.-|++|+.-+. .......+.+.+.|++ +|.++|......+|
T Consensus 97 ---~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppG 149 (444)
T 3vtf_A 97 ---ATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPG 149 (444)
T ss_dssp ---TSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTT
T ss_pred ---cCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCc
Confidence 35777765221 1235566677776764 36678877777777
No 447
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.22 E-value=1.9 Score=36.71 Aligned_cols=98 Identities=7% Similarity=-0.093 Sum_probs=60.1
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc---------CCC----------CcEEEEEcch
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG---------LDA----------SHVEFVIGDA 101 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~---------~~~----------~~V~~~~gda 101 (211)
-++|--| |+|+ .+..+|..+...+-+|+.+|.+++.++.+++.++ +.. +++++ ..|.
T Consensus 6 ~~kI~vI-GaG~--MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~ 81 (319)
T 2dpo_A 6 AGDVLIV-GSGL--VGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNL 81 (319)
T ss_dssp -CEEEEE-CCSH--HHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCH
T ss_pred CceEEEE-eeCH--HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCH
Confidence 3678888 8764 3333333332335689999999999888866532 211 13443 2344
Q ss_pred HHHhhhccCCccEEEEcCCcC--cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 102 QSLLLSHFREADFVLIDCNLE--NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 102 ~e~l~~l~~~fD~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
.+.+ ...|+|+...... ....+++.+.+.++| |.+++ +|..
T Consensus 82 ~eav----~~aDlVieavpe~~~~k~~v~~~l~~~~~~-~~Ii~-s~tS 124 (319)
T 2dpo_A 82 AEAV----EGVVHIQECVPENLDLKRKIFAQLDSIVDD-RVVLS-SSSS 124 (319)
T ss_dssp HHHT----TTEEEEEECCCSCHHHHHHHHHHHHTTCCS-SSEEE-ECCS
T ss_pred HHHH----hcCCEEEEeccCCHHHHHHHHHHHHhhCCC-CeEEE-EeCC
Confidence 4332 4679999887543 246788888888887 66554 6643
No 448
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=89.21 E-value=2.9 Score=34.40 Aligned_cols=80 Identities=14% Similarity=0.084 Sum_probs=55.3
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH------hhh---cc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL------LLS---HF 109 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~~---l~ 109 (211)
.+.+.+|-. |.+.| .+..+++.+...+.+|+.++.+++..+.+.+.+.....++.++..|..+. +.. ..
T Consensus 26 ~~~k~~lVT-Gas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 26 QPSPVALIT-GAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp -CCCEEEEE-SCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEE-CCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 356788888 76544 34556666555578999999999888777777764446789999987542 111 13
Q ss_pred CCccEEEEcCC
Q 041509 110 READFVLIDCN 120 (211)
Q Consensus 110 ~~fD~VfiD~~ 120 (211)
+++|.++..+.
T Consensus 104 g~iD~lVnnAg 114 (283)
T 3v8b_A 104 GHLDIVVANAG 114 (283)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 68999998754
No 449
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.09 E-value=1.2 Score=37.97 Aligned_cols=95 Identities=15% Similarity=0.090 Sum_probs=54.0
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcE-EEEEeCChh---HHHHHHHHhcCCCCcEEEEEcchH--HHhhhc
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGR-VVCILRRVE---EYKLSKKILGLDASHVEFVIGDAQ--SLLLSH 108 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~-v~tiE~~~~---~~~~Ar~~~~~~~~~V~~~~gda~--e~l~~l 108 (211)
...+.++||-+ | .++|..++.+|++. +.+ +.+++.++. ..+.+++ + | .+. ++..+-. +.+.++
T Consensus 164 ~~~~g~~VlV~-Ga~G~vG~~aiqlak~~---Ga~vi~~~~~~~~~~~~~~~~~~-l-G-a~~--vi~~~~~~~~~~~~~ 234 (357)
T 1zsy_A 164 QLQPGDSVIQN-ASNSGVGQAVIQIAAAL---GLRTINVVRDRPDIQKLSDRLKS-L-G-AEH--VITEEELRRPEMKNF 234 (357)
T ss_dssp CCCTTCEEEES-STTSHHHHHHHHHHHHH---TCEEEEEECCCSCHHHHHHHHHH-T-T-CSE--EEEHHHHHSGGGGGT
T ss_pred ccCCCCEEEEe-CCcCHHHHHHHHHHHHc---CCEEEEEecCccchHHHHHHHHh-c-C-CcE--EEecCcchHHHHHHH
Confidence 45567899999 6 47899999999876 444 556666543 3445543 1 2 222 2222110 112222
Q ss_pred -cC--CccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 109 -FR--EADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 109 -~~--~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.+ .+|+||-... . .....+.+.|+++|.++.+
T Consensus 235 ~~~~~~~Dvvid~~g-~---~~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 235 FKDMPQPRLALNCVG-G---KSSTELLRQLARGGTMVTY 269 (357)
T ss_dssp TSSSCCCSEEEESSC-H---HHHHHHHTTSCTTCEEEEC
T ss_pred HhCCCCceEEEECCC-c---HHHHHHHHhhCCCCEEEEE
Confidence 22 5898874333 2 2234567889999987764
No 450
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=89.03 E-value=1.6 Score=38.37 Aligned_cols=72 Identities=7% Similarity=-0.047 Sum_probs=48.8
Q ss_pred CChhHHHHHHHHHh-----hCCC--CeEEEEccccHHHHHHHHHHHccC-----CCcEEEEEeCChhHHHHHHHHhcCCC
Q 041509 24 KEPNEAEFISALAA-----GNNA--QLMVVACANVANATTLALAAAAHQ-----TGGRVVCILRRVEEYKLSKKILGLDA 91 (211)
Q Consensus 24 ~~~~~~~lL~~l~~-----~~~~--~~VLEi~Gtg~G~stl~la~a~~~-----~~g~v~tiE~~~~~~~~Ar~~~~~~~ 91 (211)
+++.-|++|...+. ...| -.|+|+ |.|.|..+.-+..++.. ..-+++-||.+|...+.-++.+...
T Consensus 57 is~~FGe~la~~~~~~w~~~g~p~~~~ivEl-GaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~- 134 (387)
T 1zkd_A 57 ISQMFGELLGLWSASVWKAADEPQTLRLIEI-GPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI- 134 (387)
T ss_dssp HCHHHHHHHHHHHHHHHHHTTCCSSEEEEEE-CCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEE-CCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC-
Confidence 44555666665532 2222 259999 99999998888776532 1348999999999998888777632
Q ss_pred CcEEEE
Q 041509 92 SHVEFV 97 (211)
Q Consensus 92 ~~V~~~ 97 (211)
++|++.
T Consensus 135 ~~v~W~ 140 (387)
T 1zkd_A 135 RNIHWH 140 (387)
T ss_dssp SSEEEE
T ss_pred CCeEEe
Confidence 245543
No 451
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.00 E-value=1.5 Score=39.26 Aligned_cols=71 Identities=14% Similarity=0.168 Sum_probs=51.5
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHH--Hhhhc-cCCccEEEEc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQS--LLLSH-FREADFVLID 118 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e--~l~~l-~~~fD~VfiD 118 (211)
.+|+=+ | .|-.+..+|+.+...+-.|+-||.|++.++.+.+.+. +..++||+.+ .|.+. -+..|+++.-
T Consensus 4 M~iiI~-G--~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~-----~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 4 MKIIIL-G--AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYD-----LRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp EEEEEE-C--CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSS-----CEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred CEEEEE-C--CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcC-----cEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 455544 4 4677788999887656789999999999988776643 6789999854 45443 3678988764
Q ss_pred CC
Q 041509 119 CN 120 (211)
Q Consensus 119 ~~ 120 (211)
.+
T Consensus 76 t~ 77 (461)
T 4g65_A 76 TN 77 (461)
T ss_dssp CS
T ss_pred cC
Confidence 33
No 452
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.91 E-value=1 Score=35.08 Aligned_cols=91 Identities=13% Similarity=0.068 Sum_probs=55.3
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CC-CCcEEEEEcchHHHhhhccCCccEEEEcCC
Q 041509 43 LMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LD-ASHVEFVIGDAQSLLLSHFREADFVLIDCN 120 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~-~~~V~~~~gda~e~l~~l~~~fD~VfiD~~ 120 (211)
+|+=+ | ++|..+..++..+...+.+|+.++.+++..+..++.+. .. ...+. ..+..+.+. ..|+|++-..
T Consensus 2 ~i~ii-G-a~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~D~Vi~~~~ 73 (212)
T 1jay_A 2 RVALL-G-GTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT--GMKNEDAAE----ACDIAVLTIP 73 (212)
T ss_dssp EEEEE-T-TTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE--EEEHHHHHH----HCSEEEECSC
T ss_pred eEEEE-c-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC--hhhHHHHHh----cCCEEEEeCC
Confidence 45556 5 25666667777665556789999999887765554332 00 12244 244444443 4799998877
Q ss_pred cCcHHHHHHHHHhcCCCCcEEEE
Q 041509 121 LENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 121 ~~~y~~~l~~~~~~L~pgG~viv 143 (211)
.....+.++.+.+.+ + +.+++
T Consensus 74 ~~~~~~~~~~l~~~~-~-~~~vi 94 (212)
T 1jay_A 74 WEHAIDTARDLKNIL-R-EKIVV 94 (212)
T ss_dssp HHHHHHHHHHTHHHH-T-TSEEE
T ss_pred hhhHHHHHHHHHHHc-C-CCEEE
Confidence 655666777666655 4 45544
No 453
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=88.88 E-value=2.7 Score=32.65 Aligned_cols=99 Identities=14% Similarity=0.129 Sum_probs=66.1
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc----cCCccEEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH----FREADFVL 116 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l----~~~fD~Vf 116 (211)
+.-|||+ |=|.|-+=-.|.+-++ +-+|+.+|..-.. +-......=.++.||+.+.++.. ..+.-++-
T Consensus 41 ~GpVlEl-GLGNGRTydHLRe~~P--~R~I~vfDR~~~~------hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaH 111 (174)
T 3iht_A 41 SGPVYEL-GLGNGRTYHHLRQHVQ--GREIYVFERAVAS------HPDSTPPEAQLILGDIRETLPATLERFGATASLVH 111 (174)
T ss_dssp CSCEEEE-CCTTCHHHHHHHHHCC--SSCEEEEESSCCC------CGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEEEE
T ss_pred CCceEEe-cCCCChhHHHHHHhCC--CCcEEEEEeeecc------CCCCCCchHheecccHHHHHHHHHHhcCCceEEEE
Confidence 3459999 9999988778998885 6899999974211 01122344578999999998763 55677777
Q ss_pred EcCCcCcH------HH-HHHHHHhcCCCCcEEEEEecCCC
Q 041509 117 IDCNLENH------EG-VLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 117 iD~~~~~y------~~-~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
.|-...+. .. .-..+.++|.| |+++|++..+.
T Consensus 112 aD~G~g~~~~d~a~a~~lsplI~~~la~-GGi~vS~~pl~ 150 (174)
T 3iht_A 112 ADLGGHNREKNDRFARLISPLIEPHLAQ-GGLMVSSDRMY 150 (174)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHGGGEEE-EEEEEESSCCC
T ss_pred eecCCCCcchhHHHHHhhhHHHHHHhcC-CcEEEeCCccC
Confidence 77544322 22 33445667888 55677676554
No 454
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.82 E-value=1 Score=37.03 Aligned_cols=90 Identities=10% Similarity=0.075 Sum_probs=56.7
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCC--CcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 41 AQLMVVACANVANATTLALAAAAHQT--GGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~--~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
..+|.=| |+| ..+..++..+... +.+|+.+|.+++..+.+++ .+... ....|..+.+ ...|+||+.
T Consensus 6 ~~~I~iI-G~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~--~g~~~---~~~~~~~~~~----~~aDvVila 73 (290)
T 3b1f_A 6 EKTIYIA-GLG--LIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE--RGIVD---EATADFKVFA----ALADVIILA 73 (290)
T ss_dssp CCEEEEE-CCS--HHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH--TTSCS---EEESCTTTTG----GGCSEEEEC
T ss_pred cceEEEE-eeC--HHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH--cCCcc---cccCCHHHhh----cCCCEEEEc
Confidence 3578888 765 4444444444321 4589999999988776654 12211 1223433332 357999998
Q ss_pred CCcCcHHHHHHHHHhc-CCCCcEEEE
Q 041509 119 CNLENHEGVLRAVQAG-NKPNGAVVV 143 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~-L~pgG~viv 143 (211)
.......+.++.+.+. +++ |.+++
T Consensus 74 vp~~~~~~v~~~l~~~~l~~-~~ivi 98 (290)
T 3b1f_A 74 VPIKKTIDFIKILADLDLKE-DVIIT 98 (290)
T ss_dssp SCHHHHHHHHHHHHTSCCCT-TCEEE
T ss_pred CCHHHHHHHHHHHHhcCCCC-CCEEE
Confidence 8877678888888888 876 55555
No 455
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.70 E-value=4.8 Score=33.15 Aligned_cols=105 Identities=10% Similarity=0.058 Sum_probs=64.2
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCCh--hHHHHHHHHhcCCCCcEEEEEcchHHH------hhh---c
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRV--EEYKLSKKILGLDASHVEFVIGDAQSL------LLS---H 108 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~--~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~~---l 108 (211)
+.+++|-. |.+.| .+..+++.+...+.+|+.++.+. +..+...+.++....++.++..|..+. +.. .
T Consensus 48 ~~k~vlVT-Gas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVT-GGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEE-TTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEe-CCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45788888 75444 35666666655578999998873 334444444442345788888886542 111 1
Q ss_pred cCCccEEEEcCCcC------------cH-----------HHHHHHHHhcCCCCcEEEEEec
Q 041509 109 FREADFVLIDCNLE------------NH-----------EGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 109 ~~~fD~VfiD~~~~------------~y-----------~~~l~~~~~~L~pgG~viv~dn 146 (211)
.+++|.++..+... ++ ....+.+.+.++++|.|+..-.
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 36899999876421 01 2345566777777787776543
No 456
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=88.67 E-value=2.9 Score=35.00 Aligned_cols=96 Identities=18% Similarity=0.095 Sum_probs=55.8
Q ss_pred eEEEEccccHHHHHHHHHHHccCCC--cEEEEEeCChhHHHHHHHHhc----CCCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 43 LMVVACANVANATTLALAAAAHQTG--GRVVCILRRVEEYKLSKKILG----LDASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~--g~v~tiE~~~~~~~~Ar~~~~----~~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
+|.=| |+|.=.++ ++..+...+ .+|+.+|++++.++.....+. .....+++...|. +. -...|+||
T Consensus 3 kI~VI-GaG~~G~~--la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~----~~~aDvVi 74 (309)
T 1hyh_A 3 KIGII-GLGNVGAA--VAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AA----LADADVVI 74 (309)
T ss_dssp EEEEE-CCSHHHHH--HHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GG----GTTCSEEE
T ss_pred EEEEE-CCCHHHHH--HHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH----hCCCCEEE
Confidence 57778 76543333 333332223 589999999987755443332 1123355544554 33 24689999
Q ss_pred EcCCcCc--------------------HHHHHHHHHhcCCCCcEEEEEecC
Q 041509 117 IDCNLEN--------------------HEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 117 iD~~~~~--------------------y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
+-..... ..+..+.+.+. .|++.++++.|.
T Consensus 75 iav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~~~~~ii~~tNp 124 (309)
T 1hyh_A 75 STLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVVISNP 124 (309)
T ss_dssp ECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEECSSS
T ss_pred EecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEEcCc
Confidence 9876433 25666666665 466777766664
No 457
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=88.64 E-value=0.89 Score=48.97 Aligned_cols=100 Identities=15% Similarity=0.088 Sum_probs=67.5
Q ss_pred hhCCCCeEEEEcc--ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC-CCcE-EEEEcchHHHhhhc--cC
Q 041509 37 AGNNAQLMVVACA--NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD-ASHV-EFVIGDAQSLLLSH--FR 110 (211)
Q Consensus 37 ~~~~~~~VLEi~G--tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~-~~~V-~~~~gda~e~l~~l--~~ 110 (211)
...++++||-. | .|+|..++.+|++. +.+|++++.+++..+.+++.+.++ .+.| .....+..+.+... ..
T Consensus 1664 ~l~~Ge~VLI~-gaaGgVG~aAiqlAk~~---Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~ 1739 (2512)
T 2vz8_A 1664 RMQPGESVLIH-SGSGGVGQAAIAIALSR---GCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGK 1739 (2512)
T ss_dssp CCCTTCEEEET-TTTSHHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSC
T ss_pred cCCCCCEEEEE-eCChHHHHHHHHHHHHc---CCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCC
Confidence 34677889988 5 68888888899875 679999999999999998866311 2222 21122333333222 24
Q ss_pred CccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEEE
Q 041509 111 EADFVLIDCNLENHEGVLRAVQAGNKPNGAVVVG 144 (211)
Q Consensus 111 ~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv~ 144 (211)
.+|+||- +-. .+.++...+.|+|+|.++..
T Consensus 1740 GvDvVld-~~g---~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1740 GVDLVLN-SLA---EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp CEEEEEE-CCC---HHHHHHHHTTEEEEEEEEEC
T ss_pred CceEEEE-CCC---chHHHHHHHhcCCCcEEEEe
Confidence 6999874 332 36688889999998887654
No 458
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.54 E-value=2.7 Score=33.31 Aligned_cols=79 Identities=10% Similarity=0.093 Sum_probs=54.2
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH------hhh---ccC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL------LLS---HFR 110 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~~---l~~ 110 (211)
+.+++|-. |.+.| .+..+++.+...+.+|+.++.+++..+...+.++....+++++..|..+. +.. ..+
T Consensus 4 ~~k~vlIT-Gas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVT-GASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEES-SCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEE-CCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45778888 65433 44566666655578999999999888777766663345789999986542 111 145
Q ss_pred CccEEEEcCC
Q 041509 111 EADFVLIDCN 120 (211)
Q Consensus 111 ~fD~VfiD~~ 120 (211)
++|.++..+.
T Consensus 82 ~id~li~~Ag 91 (247)
T 3lyl_A 82 AIDILVNNAG 91 (247)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 8999998764
No 459
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=88.47 E-value=4 Score=34.39 Aligned_cols=100 Identities=14% Similarity=0.110 Sum_probs=56.4
Q ss_pred CCCeEEEEccccH-HHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 40 NAQLMVVACANVA-NATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 40 ~~~~VLEi~Gtg~-G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
+..+|.-| |+|. |+. +....+......+|+-+|++++....|.........+++. .+|. +. ...-|+|++-
T Consensus 13 ~~~kV~Vi-GaG~vG~~-~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t~d~-~~----l~~aD~Vi~a 84 (303)
T 2i6t_A 13 TVNKITVV-GGGELGIA-CTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEI-SKDL-SA----SAHSKVVIFT 84 (303)
T ss_dssp -CCEEEEE-CCSHHHHH-HHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEE-ESCG-GG----GTTCSEEEEC
T ss_pred CCCEEEEE-CCCHHHHH-HHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE-eCCH-HH----HCCCCEEEEc
Confidence 34679999 9985 543 3322223222458999999986444454443311236665 3564 22 2467999998
Q ss_pred CCcC---------------cHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 119 CNLE---------------NHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 119 ~~~~---------------~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
+..+ -..++++.+.+.- |.+.++++.|..
T Consensus 85 ag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~ 128 (303)
T 2i6t_A 85 VNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPV 128 (303)
T ss_dssp CCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChH
Confidence 6322 1356666666654 788888878854
No 460
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.37 E-value=1.9 Score=35.81 Aligned_cols=96 Identities=18% Similarity=0.117 Sum_probs=57.4
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc---------CC-C-------------CcEEEEE
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG---------LD-A-------------SHVEFVI 98 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~---------~~-~-------------~~V~~~~ 98 (211)
++|.-| |+|. .+..+|..+...+-+|+.+|.+++.++.+++.+. +. . .++++ .
T Consensus 16 ~~I~VI-G~G~--mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~ 91 (302)
T 1f0y_A 16 KHVTVI-GGGL--MGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S 91 (302)
T ss_dssp CEEEEE-CCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred CEEEEE-CCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-e
Confidence 578888 8754 3333443333335689999999998887654321 21 1 13443 2
Q ss_pred cchHHHhhhccCCccEEEEcCCcCc--HHHHHHHHHhcCCCCcEEEEEecC
Q 041509 99 GDAQSLLLSHFREADFVLIDCNLEN--HEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 99 gda~e~l~~l~~~fD~VfiD~~~~~--y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
.|..+. -...|+|++--.... ...+++.+.+.++| +.+++ .|.
T Consensus 92 ~~~~~~----~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~-~~iv~-s~t 136 (302)
T 1f0y_A 92 TDAASV----VHSTDLVVEAIVENLKVKNELFKRLDKFAAE-HTIFA-SNT 136 (302)
T ss_dssp SCHHHH----TTSCSEEEECCCSCHHHHHHHHHHHTTTSCT-TCEEE-ECC
T ss_pred cCHHHh----hcCCCEEEEcCcCcHHHHHHHHHHHHhhCCC-CeEEE-ECC
Confidence 343333 246899998765432 35678888888876 55554 543
No 461
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.35 E-value=4 Score=34.54 Aligned_cols=101 Identities=15% Similarity=0.111 Sum_probs=53.8
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHH-HHHHhcC--CCCcEEEEEcchHHHhhhccCCccEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKL-SKKILGL--DASHVEFVIGDAQSLLLSHFREADFVL 116 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~-Ar~~~~~--~~~~V~~~~gda~e~l~~l~~~fD~Vf 116 (211)
++.+|.=| |+|.=.+++.+..+.....++|+.+|++++.++- +....+. +..++++..+|.. . ....|+|+
T Consensus 6 ~~~KI~Ii-GaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~-a----~~~aDvVi 79 (318)
T 1y6j_A 6 SRSKVAII-GAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYS-D----VKDCDVIV 79 (318)
T ss_dssp -CCCEEEE-CCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGG-G----GTTCSEEE
T ss_pred CCCEEEEE-CCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHH-H----hCCCCEEE
Confidence 45678889 7654333333333332224599999999876542 3332222 3346666655422 2 34679999
Q ss_pred EcCCcCc----------------HHHHHHHHHhcCCCCcEEEEEecC
Q 041509 117 IDCNLEN----------------HEGVLRAVQAGNKPNGAVVVGYNA 147 (211)
Q Consensus 117 iD~~~~~----------------y~~~l~~~~~~L~pgG~viv~dn~ 147 (211)
+-+..+. ..++.+.+.+. .|++.+++..|.
T Consensus 80 i~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP 125 (318)
T 1y6j_A 80 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNP 125 (318)
T ss_dssp ECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSS
T ss_pred EcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCc
Confidence 9765331 24455555554 688888876664
No 462
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=88.30 E-value=5 Score=28.05 Aligned_cols=67 Identities=16% Similarity=0.114 Sum_probs=46.0
Q ss_pred CcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEEEcCCcC-------cHHHHHHHHHhc
Q 041509 67 GGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVLIDCNLE-------NHEGVLRAVQAG 134 (211)
Q Consensus 67 ~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~-------~y~~~l~~~~~~ 134 (211)
..+|.-+|-++...+..+..+....-.+. ...+..+.+..+ ..++|+|++|.... +-.+.++.+.+.
T Consensus 3 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~ 77 (140)
T 2qr3_A 3 LGTIIIVDDNKGVLTAVQLLLKNHFSKVI-TLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQ 77 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTTSSEEE-EECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHhCCcEEE-EeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhh
Confidence 35799999999999888888873223344 556666665543 46799999997643 345666666654
No 463
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=88.23 E-value=1.6 Score=37.78 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=56.6
Q ss_pred eEEEEccccHHHHHHHHHHHccC-CCcEEEEEe---CChhHHHHHHHHhc------CCCC-cEE------EEEcchHHHh
Q 041509 43 LMVVACANVANATTLALAAAAHQ-TGGRVVCIL---RRVEEYKLSKKILG------LDAS-HVE------FVIGDAQSLL 105 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~-~~g~v~tiE---~~~~~~~~Ar~~~~------~~~~-~V~------~~~gda~e~l 105 (211)
+|.-| |+| ..+..+|..+.. .+..|+.++ .+++.++.+.+.-. .... .++ ....|..+.+
T Consensus 4 kI~Vi-GaG--~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 80 (404)
T 3c7a_A 4 KVCVC-GGG--NGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAI 80 (404)
T ss_dssp EEEEE-CCS--HHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHH
T ss_pred eEEEE-CCC--HHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHh
Confidence 57777 764 455566665543 256899999 77766655322110 0001 011 2333444332
Q ss_pred hhccCCccEEEEcCCcCcHHHHHHHHHhcCCCCcEEEE
Q 041509 106 LSHFREADFVLIDCNLENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 106 ~~l~~~fD~VfiD~~~~~y~~~l~~~~~~L~pgG~viv 143 (211)
...|+||+--......+.++.+.+.++| +.+++
T Consensus 81 ----~~aD~Vilav~~~~~~~v~~~l~~~l~~-~~ivv 113 (404)
T 3c7a_A 81 ----SGADVVILTVPAFAHEGYFQAMAPYVQD-SALIV 113 (404)
T ss_dssp ----TTCSEEEECSCGGGHHHHHHHHTTTCCT-TCEEE
T ss_pred ----CCCCEEEEeCchHHHHHHHHHHHhhCCC-CcEEE
Confidence 4689999988777778899999998887 55555
No 464
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.22 E-value=1.6 Score=35.29 Aligned_cols=80 Identities=14% Similarity=0.116 Sum_probs=57.8
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCCc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCNL 121 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~ 121 (211)
++||-+ | + |+.+.++++.+...+-+|+++..++........ ..++++.+|..+. . ...+|.||.-+..
T Consensus 6 ~~ilVt-G-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~-~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSF-G-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEP-S--LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEE-T-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCC-C--CTTCCEEEECCCC
T ss_pred CcEEEE-C-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEeccccc-c--cCCCCEEEECCCc
Confidence 579999 8 4 999999999887667799999999876544322 4589999998773 3 4678999987643
Q ss_pred C----c-HHHHHHHHHh
Q 041509 122 E----N-HEGVLRAVQA 133 (211)
Q Consensus 122 ~----~-y~~~l~~~~~ 133 (211)
. . ....++.+..
T Consensus 74 ~~~~~~~~~~l~~a~~~ 90 (286)
T 3ius_A 74 DSGGDPVLAALGDQIAA 90 (286)
T ss_dssp BTTBCHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHh
Confidence 2 1 2445555544
No 465
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.21 E-value=2.6 Score=33.95 Aligned_cols=78 Identities=19% Similarity=0.175 Sum_probs=52.8
Q ss_pred CCCCeEEEEccc---cHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcchHHH------hhhc
Q 041509 39 NNAQLMVVACAN---VANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDAQSL------LLSH 108 (211)
Q Consensus 39 ~~~~~VLEi~Gt---g~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda~e~------l~~l 108 (211)
.+.+++|-. |. |.|. .+++.+...+.+|+.++.+++..+.+.+.++ ....++.++..|..+. +...
T Consensus 20 l~~k~vlIT-Gasg~GIG~---~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 20 LKGKVVLVT-AAAGTGIGS---TTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTTCEEEES-SCSSSSHHH---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEE-CCCCCchHH---HHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence 356788888 54 3554 3444443347899999999998887777775 3346899999997542 1111
Q ss_pred ---cCCccEEEEcCC
Q 041509 109 ---FREADFVLIDCN 120 (211)
Q Consensus 109 ---~~~fD~VfiD~~ 120 (211)
.+++|.++..+.
T Consensus 96 ~~~~g~id~li~~Ag 110 (266)
T 3o38_A 96 VEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCcEEEECCC
Confidence 358999998764
No 466
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=88.20 E-value=1.2 Score=40.16 Aligned_cols=101 Identities=15% Similarity=0.023 Sum_probs=57.8
Q ss_pred CeEEEEccccHHHHHHHHHHHccCC--CcEEEEEeCChhHHHHHHHHhcCC-------------CCcEEEEEcchHHHhh
Q 041509 42 QLMVVACANVANATTLALAAAAHQT--GGRVVCILRRVEEYKLSKKILGLD-------------ASHVEFVIGDAQSLLL 106 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~--~g~v~tiE~~~~~~~~Ar~~~~~~-------------~~~V~~~~gda~e~l~ 106 (211)
.+|.-| |+| |.+..+|..+... +-+|+.+|++++.++..++..... ..++++ ..|..+.+.
T Consensus 10 mkI~VI-G~G--~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~ 85 (481)
T 2o3j_A 10 SKVVCV-GAG--YVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIA 85 (481)
T ss_dssp CEEEEE-CCS--TTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH
T ss_pred CEEEEE-CCC--HHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhh
Confidence 467778 764 4444444443322 458999999999887665321100 112332 334434333
Q ss_pred hccCCccEEEEcCCcC---------------cHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 107 SHFREADFVLIDCNLE---------------NHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 107 ~l~~~fD~VfiD~~~~---------------~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
..|+||+.-..+ ...+.++.+.+.+++ |.++|......++
T Consensus 86 ----~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~-g~iVV~~STv~~g 140 (481)
T 2o3j_A 86 ----EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGG-PKIVVEKSTVPVK 140 (481)
T ss_dssp ----HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCS-CEEEEECSCCCTT
T ss_pred ----cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCC-CCEEEECCCCCCC
Confidence 479999974221 146677888888887 6676643344555
No 467
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=88.19 E-value=0.12 Score=55.51 Aligned_cols=102 Identities=14% Similarity=0.073 Sum_probs=50.6
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCC---CcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQT---GGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~---~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
..+|||| |.|+|..|..+...+... ..+.+-.|+++...+.|++.++.+ .++.-.=|..+.-+.....||+|+.
T Consensus 1241 ~~~ilEi-gagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~--di~~~~~d~~~~~~~~~~~ydlvia 1317 (2512)
T 2vz8_A 1241 KMKVVEV-LAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL--HVTQGQWDPANPAPGSLGKADLLVC 1317 (2512)
T ss_dssp EEEEEEE-SCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH--TEEEECCCSSCCCC-----CCEEEE
T ss_pred CceEEEE-CCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc--ccccccccccccccCCCCceeEEEE
Confidence 4579999 999998877777666421 246788899998888888776521 1221100111100001346999997
Q ss_pred cCC---cCcHHHHHHHHHhcCCCCcEEEEEe
Q 041509 118 DCN---LENHEGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 118 D~~---~~~y~~~l~~~~~~L~pgG~viv~d 145 (211)
... ..+..+.++.+.++|+|||.+++..
T Consensus 1318 ~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1318 NCALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp ECC--------------------CCEEEEEE
T ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 532 2245667888888999999877643
No 468
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.16 E-value=1.4 Score=38.99 Aligned_cols=42 Identities=19% Similarity=0.066 Sum_probs=34.0
Q ss_pred CCCeEEEEcccc-HHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHH
Q 041509 40 NAQLMVVACANV-ANATTLALAAAAHQTGGRVVCILRRVEEYKLSKK 85 (211)
Q Consensus 40 ~~~~VLEi~Gtg-~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~ 85 (211)
++.+|+-+ |+| .|..++.++.++ +.+|+.+|.+++..+.+++
T Consensus 189 ~~~kV~Vi-G~G~iG~~aa~~a~~l---Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVM-GAGVAGLQAIATARRL---GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEE-CCcHHHHHHHHHHHHC---CCEEEEEcCCHHHHHHHHH
Confidence 67899999 876 566666677765 6799999999998888876
No 469
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=88.15 E-value=6 Score=31.96 Aligned_cols=106 Identities=14% Similarity=0.131 Sum_probs=64.6
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCC-hhHHHHHHHHhcCCCCcEEEEEcchHHH------hhh---c
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRR-VEEYKLSKKILGLDASHVEFVIGDAQSL------LLS---H 108 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~-~~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~~---l 108 (211)
.+.+++|-. |.+.|. +..+++.+...+.+|+.++.+ ++..+...+.++....++.++..|..+. +.. .
T Consensus 16 l~~k~~lVT-Gas~gI-G~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 16 LDGKVALVT-GSGRGI-GAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CTTCEEEES-CTTSHH-HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEE-CCCchH-HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 355788888 765443 455666655557889887764 5555555555553346788999986542 111 1
Q ss_pred cCCccEEEEcCCcC-----------cH-----------HHHHHHHHhcCCCCcEEEEEec
Q 041509 109 FREADFVLIDCNLE-----------NH-----------EGVLRAVQAGNKPNGAVVVGYN 146 (211)
Q Consensus 109 ~~~fD~VfiD~~~~-----------~y-----------~~~l~~~~~~L~pgG~viv~dn 146 (211)
.+++|.++..+... ++ ....+.+.+.++++|.++..-.
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 36899999775321 11 2344566777777788776554
No 470
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.10 E-value=2.7 Score=37.81 Aligned_cols=94 Identities=12% Similarity=0.057 Sum_probs=61.3
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCCc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCNL 121 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~ 121 (211)
++|.=| |+ |..+..||..+...+-+|+..+.+++..+...+...+ ..+. ...+..+.+.. .++.|+||+--..
T Consensus 16 ~~IgvI-Gl--G~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~--~gi~-~~~s~~e~v~~-l~~aDvVil~Vp~ 88 (480)
T 2zyd_A 16 QQIGVV-GM--AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPG--KKLV-PYYTVKEFVES-LETPRRILLMVKA 88 (480)
T ss_dssp BSEEEE-CC--SHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTT--SCEE-ECSSHHHHHHT-BCSSCEEEECSCS
T ss_pred CeEEEE-cc--HHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCC--CCeE-EeCCHHHHHhC-CCCCCEEEEECCC
Confidence 457777 65 4555666666655466899999999887766654321 1233 23455555442 2358999998776
Q ss_pred C-cHHHHHHHHHhcCCCCcEEEE
Q 041509 122 E-NHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 122 ~-~y~~~l~~~~~~L~pgG~viv 143 (211)
. ...+.++.+.+.|+| |.++|
T Consensus 89 ~~~v~~vl~~l~~~l~~-g~iII 110 (480)
T 2zyd_A 89 GAGTDAAIDSLKPYLDK-GDIII 110 (480)
T ss_dssp SSHHHHHHHHHGGGCCT-TCEEE
T ss_pred HHHHHHHHHHHHhhcCC-CCEEE
Confidence 4 567888899888987 44554
No 471
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.09 E-value=0.86 Score=37.01 Aligned_cols=88 Identities=18% Similarity=0.169 Sum_probs=55.9
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcE-EEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCC
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGR-VVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCN 120 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~-v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~ 120 (211)
.+|.=| |+| ..+..++..+...+-+ |+.+|.+++.++.+.+.+. +. ...+..+. -...|+|++-..
T Consensus 11 m~i~ii-G~G--~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g-----~~-~~~~~~~~----~~~~Dvvi~av~ 77 (266)
T 3d1l_A 11 TPIVLI-GAG--NLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE-----AE-YTTDLAEV----NPYAKLYIVSLK 77 (266)
T ss_dssp CCEEEE-CCS--HHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT-----CE-EESCGGGS----CSCCSEEEECCC
T ss_pred CeEEEE-cCC--HHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC-----Cc-eeCCHHHH----hcCCCEEEEecC
Confidence 468888 875 4444444444332345 8899999988776655432 22 12343333 246899999887
Q ss_pred cCcHHHHHHHHHhcCCCCcEEEE
Q 041509 121 LENHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 121 ~~~y~~~l~~~~~~L~pgG~viv 143 (211)
.....+.++.+.+.+++ |.+++
T Consensus 78 ~~~~~~v~~~l~~~~~~-~~ivv 99 (266)
T 3d1l_A 78 DSAFAELLQGIVEGKRE-EALMV 99 (266)
T ss_dssp HHHHHHHHHHHHTTCCT-TCEEE
T ss_pred HHHHHHHHHHHHhhcCC-CcEEE
Confidence 66667888888887877 55554
No 472
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=88.06 E-value=4.4 Score=34.33 Aligned_cols=95 Identities=14% Similarity=0.083 Sum_probs=58.8
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCC-CcEEEE-EeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQT-GGRVVC-ILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLI 117 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~-~g~v~t-iE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~Vfi 117 (211)
++.+|.=| |+|. .+-.++.++... +.++++ +|.+++.++.+.+.+. . .. ..|..+++. ...+|+|++
T Consensus 4 ~~~~vgii-G~G~--~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g-~----~~-~~~~~~~l~--~~~~D~V~i 72 (354)
T 3db2_A 4 NPVGVAAI-GLGR--WAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYN-C----AG-DATMEALLA--REDVEMVII 72 (354)
T ss_dssp CCEEEEEE-CCSH--HHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHT-C----CC-CSSHHHHHH--CSSCCEEEE
T ss_pred CcceEEEE-ccCH--HHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcC-C----CC-cCCHHHHhc--CCCCCEEEE
Confidence 34568888 8864 444455555443 567664 5999987765544443 1 11 467777765 467999999
Q ss_pred cCCcCcHHHHHHHHHhcCCCCcEEEEEecCCC
Q 041509 118 DCNLENHEGVLRAVQAGNKPNGAVVVGYNAFR 149 (211)
Q Consensus 118 D~~~~~y~~~l~~~~~~L~pgG~viv~dn~~~ 149 (211)
..+.....+....+.+ .|.-++++..+.
T Consensus 73 ~tp~~~h~~~~~~al~----~gk~vl~EKP~~ 100 (354)
T 3db2_A 73 TVPNDKHAEVIEQCAR----SGKHIYVEKPIS 100 (354)
T ss_dssp CSCTTSHHHHHHHHHH----TTCEEEEESSSC
T ss_pred eCChHHHHHHHHHHHH----cCCEEEEccCCC
Confidence 8877766666555554 345455566543
No 473
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=88.04 E-value=5 Score=27.76 Aligned_cols=77 Identities=13% Similarity=0.068 Sum_probs=49.4
Q ss_pred CcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEEEcCCcC--cHHHHHHHHHhcCCCCcEEEE
Q 041509 67 GGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVLIDCNLE--NHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 67 ~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv 143 (211)
+.+|.-+|-++...+..++.+......+. ...+..+.+..+ ..++|+|++|...+ +-.+.++.+... .|.-.+++
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~~ii~ 84 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGATTV-LAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNR-GDQTPVLV 84 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCEEE-EESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHT-TCCCCEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCceEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhc-CCCCCEEE
Confidence 56899999999998888888872222343 466777776654 46799999997644 335566666653 23333444
Q ss_pred Ee
Q 041509 144 GY 145 (211)
Q Consensus 144 ~d 145 (211)
..
T Consensus 85 ~t 86 (130)
T 3eod_A 85 IS 86 (130)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 474
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.02 E-value=2.8 Score=34.72 Aligned_cols=80 Identities=18% Similarity=0.153 Sum_probs=56.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH--hhhc-------c
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL--LLSH-------F 109 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~--l~~l-------~ 109 (211)
.+.+.||-. |++.| .+..+++.+...+.+|+.++.+++.++.+.+.+.....++.++..|..+. +..+ .
T Consensus 29 l~gk~vlVT-Gas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 29 FDGRAAVVT-GGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp STTCEEEEE-TTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEe-CCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 456789988 76544 34566666655578999999999988877777763345789999986542 1111 3
Q ss_pred CCccEEEEcCC
Q 041509 110 READFVLIDCN 120 (211)
Q Consensus 110 ~~fD~VfiD~~ 120 (211)
+++|.++..+.
T Consensus 107 g~id~lvnnAg 117 (301)
T 3tjr_A 107 GGVDVVFSNAG 117 (301)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 58999998764
No 475
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.98 E-value=0.73 Score=39.79 Aligned_cols=96 Identities=15% Similarity=0.058 Sum_probs=62.1
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCCc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCNL 121 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~ 121 (211)
++|.=| |+| ..+-.++.++...+.+|+.+|.+++.++.|++. +. + ...+..+.+..-....|+||+-.+.
T Consensus 9 ~kIgII-G~G--~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~--G~----~-~~~~~~e~~~~a~~~aDlVilavP~ 78 (341)
T 3ktd_A 9 RPVCIL-GLG--LIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDE--GF----D-VSADLEATLQRAAAEDALIVLAVPM 78 (341)
T ss_dssp SCEEEE-CCS--HHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHT--TC----C-EESCHHHHHHHHHHTTCEEEECSCH
T ss_pred CEEEEE-eec--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--CC----e-eeCCHHHHHHhcccCCCEEEEeCCH
Confidence 568888 764 555556666654467899999999988777542 32 1 2355555554212357999999887
Q ss_pred CcHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 041509 122 ENHEGVLRAVQAGNKPNGAVVVGYNAFRK 150 (211)
Q Consensus 122 ~~y~~~l~~~~~~L~pgG~viv~dn~~~~ 150 (211)
....+.++.+.+. +| |.+++ |..-.+
T Consensus 79 ~~~~~vl~~l~~~-~~-~~iv~-Dv~Svk 104 (341)
T 3ktd_A 79 TAIDSLLDAVHTH-AP-NNGFT-DVVSVK 104 (341)
T ss_dssp HHHHHHHHHHHHH-CT-TCCEE-ECCSCS
T ss_pred HHHHHHHHHHHcc-CC-CCEEE-EcCCCC
Confidence 6677788888775 66 55544 643333
No 476
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=87.95 E-value=5.8 Score=28.39 Aligned_cols=77 Identities=16% Similarity=0.118 Sum_probs=51.1
Q ss_pred cEEEEEeCChhHHHHHHHHhcCCCC-cEEEEEcchHHHhhhc-cCCccEEEEcCCcC--cHHHHHHHHHhcCCCCcEEEE
Q 041509 68 GRVVCILRRVEEYKLSKKILGLDAS-HVEFVIGDAQSLLLSH-FREADFVLIDCNLE--NHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 68 g~v~tiE~~~~~~~~Ar~~~~~~~~-~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv 143 (211)
-+|.-||-++...+..+..+..... ..-....+..+.+..+ ...+|+|++|.... +-.+.++.+.+. .|.-.+++
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~-~~~~~ii~ 99 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSE-KLETKVVV 99 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHT-TCSCEEEE
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHh-CCCCeEEE
Confidence 4799999999998888888873222 2334566677766544 46899999997644 446677777664 33344444
Q ss_pred Ee
Q 041509 144 GY 145 (211)
Q Consensus 144 ~d 145 (211)
..
T Consensus 100 ls 101 (150)
T 4e7p_A 100 VT 101 (150)
T ss_dssp EE
T ss_pred Ee
Confidence 33
No 477
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.80 E-value=1.5 Score=39.23 Aligned_cols=101 Identities=12% Similarity=0.059 Sum_probs=56.6
Q ss_pred CeEEEEccccHHHHHHHHHHHccCC--CcEEEEEeCChhHHHHHHHH------------hc-CCCCcEEEEEcchHHHhh
Q 041509 42 QLMVVACANVANATTLALAAAAHQT--GGRVVCILRRVEEYKLSKKI------------LG-LDASHVEFVIGDAQSLLL 106 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~--~g~v~tiE~~~~~~~~Ar~~------------~~-~~~~~V~~~~gda~e~l~ 106 (211)
.+|.-| |+| |.+..+|..+... +-+|+.+|++++.++..++. +. ....++++ ..|..+.+.
T Consensus 6 mkI~VI-G~G--~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~ 81 (467)
T 2q3e_A 6 KKICCI-GAG--YVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIK 81 (467)
T ss_dssp CEEEEE-CCS--TTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH
T ss_pred cEEEEE-CCC--HHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHh
Confidence 467778 764 4444444444322 46899999999877664321 10 00123433 344444433
Q ss_pred hccCCccEEEEcCCcCc---------------HHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 107 SHFREADFVLIDCNLEN---------------HEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 107 ~l~~~fD~VfiD~~~~~---------------y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
..|+||+.-..+. .....+.+.+.+++ |.+++......++
T Consensus 82 ----~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~-g~iVV~~STv~~g 136 (467)
T 2q3e_A 82 ----EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNG-YKIVTEKSTVPVR 136 (467)
T ss_dssp ----HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCS-EEEEEECSCCCTT
T ss_pred ----cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCC-CCEEEECCcCCch
Confidence 4799998743211 35667778888887 6666633334444
No 478
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=87.80 E-value=1.7 Score=41.34 Aligned_cols=59 Identities=10% Similarity=-0.036 Sum_probs=39.4
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCC---cEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTG---GRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL 104 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~---g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~ 104 (211)
.-+|||++ ||+|-+++-|-+|....+ -.+.++|+|+.+.+.-+.|+. ...+.++|+.++
T Consensus 212 ~ltvIDLF-AG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp----~~~~~~~di~~i 273 (784)
T 4ft4_B 212 TATLLDLY-SGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP----QTEVRNEKADEF 273 (784)
T ss_dssp EEEEEEET-CTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT----TSEEEESCHHHH
T ss_pred CCeEEEeC-cCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC----CCceecCcHHHh
Confidence 34699995 888888777766531101 257899999999999988864 133445555443
No 479
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=87.73 E-value=2.6 Score=33.97 Aligned_cols=80 Identities=19% Similarity=0.189 Sum_probs=55.3
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH--hh----h---cc
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL--LL----S---HF 109 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~--l~----~---l~ 109 (211)
.+.++||-. |++. ..+..+++.+...+.+|+.++.+++..+...+.+.....+++++..|..+. +. . ..
T Consensus 27 l~~k~vlIT-Gas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 27 LSGQVAVVT-GASR-GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTTCEEEES-STTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEE-CCCC-hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 355788888 6543 345666666655578999999999888777766663346789999986542 11 1 13
Q ss_pred CCccEEEEcCC
Q 041509 110 READFVLIDCN 120 (211)
Q Consensus 110 ~~fD~VfiD~~ 120 (211)
+++|.++..+.
T Consensus 105 g~id~lv~~Ag 115 (262)
T 3rkr_A 105 GRCDVLVNNAG 115 (262)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 68999998764
No 480
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=87.70 E-value=3.5 Score=37.17 Aligned_cols=103 Identities=18% Similarity=0.085 Sum_probs=60.1
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCC-Cc-EEEEEeCChh----HHHHHHHHhcCC----------------CCcEEE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQT-GG-RVVCILRRVE----EYKLSKKILGLD----------------ASHVEF 96 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~-~g-~v~tiE~~~~----~~~~Ar~~~~~~----------------~~~V~~ 96 (211)
.+-.+|--| |+| |.+..+|..+... +- +|+.+|++++ .++..++..... ..++++
T Consensus 16 ~~~mkIaVI-GlG--~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ 92 (478)
T 3g79_A 16 GPIKKIGVL-GMG--YVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC 92 (478)
T ss_dssp CSCCEEEEE-CCS--TTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEE-CcC--HHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE
Confidence 344678888 754 5555555544443 45 7999999998 666554421100 234444
Q ss_pred EEcchHHHhhhccCCccEEEEcCCcC------------cHHHHHHHHHhcCCCCcEEEEEecCCCCC
Q 041509 97 VIGDAQSLLLSHFREADFVLIDCNLE------------NHEGVLRAVQAGNKPNGAVVVGYNAFRKG 151 (211)
Q Consensus 97 ~~gda~e~l~~l~~~fD~VfiD~~~~------------~y~~~l~~~~~~L~pgG~viv~dn~~~~~ 151 (211)
..| .+.+ ...|+||+.-+.+ ......+.+.+.|+| |.++|......++
T Consensus 93 -ttd-~ea~----~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~-g~iVV~~STv~pg 152 (478)
T 3g79_A 93 -TPD-FSRI----SELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKP-GMLVVLESTITPG 152 (478)
T ss_dssp -ESC-GGGG----GGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCT-TCEEEECSCCCTT
T ss_pred -eCc-HHHH----hcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCC-CcEEEEeCCCChH
Confidence 233 3332 3479999864221 135566778888887 5666655555665
No 481
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=87.66 E-value=4.2 Score=32.06 Aligned_cols=76 Identities=9% Similarity=0.115 Sum_probs=52.4
Q ss_pred CCeEEEEccccHHHHHHHHHHHccCCC-cEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH--hhhccCCccEEEE
Q 041509 41 AQLMVVACANVANATTLALAAAAHQTG-GRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL--LLSHFREADFVLI 117 (211)
Q Consensus 41 ~~~VLEi~Gtg~G~stl~la~a~~~~~-g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~--l~~l~~~fD~Vfi 117 (211)
.++||-+ | ++|..+..+++.+...+ .+|+.++.+++..+ .....+++++.+|..+. +......+|.||.
T Consensus 23 mk~vlVt-G-atG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~ 94 (236)
T 3qvo_A 23 MKNVLIL-G-AGGQIARHVINQLADKQTIKQTLFARQPAKIH------KPYPTNSQIIMGDVLNHAALKQAMQGQDIVYA 94 (236)
T ss_dssp CEEEEEE-T-TTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC------SSCCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEE-e-CCcHHHHHHHHHHHhCCCceEEEEEcChhhhc------ccccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 3568877 5 46777788888887656 69999999876421 12245799999998543 3333467899998
Q ss_pred cCCcCcH
Q 041509 118 DCNLENH 124 (211)
Q Consensus 118 D~~~~~y 124 (211)
.+.....
T Consensus 95 ~a~~~~~ 101 (236)
T 3qvo_A 95 NLTGEDL 101 (236)
T ss_dssp ECCSTTH
T ss_pred cCCCCch
Confidence 7765544
No 482
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=87.59 E-value=1.3 Score=35.34 Aligned_cols=79 Identities=16% Similarity=0.199 Sum_probs=53.4
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccC-CCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH--hhhc-------c
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQ-TGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL--LLSH-------F 109 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~-~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~--l~~l-------~ 109 (211)
+.++||-. |. +|..+..+++.+.. .+.+|+.++.+++..+.+.+.+.....+++++.+|..+. +..+ .
T Consensus 3 ~~k~vlIT-Ga-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVT-GG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEES-SC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEe-CC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 45678877 64 45566777777655 578999999998877766666652235688898886542 1111 2
Q ss_pred CCccEEEEcCC
Q 041509 110 READFVLIDCN 120 (211)
Q Consensus 110 ~~fD~VfiD~~ 120 (211)
+++|.|+..+.
T Consensus 81 g~id~li~~Ag 91 (276)
T 1wma_A 81 GGLDVLVNNAG 91 (276)
T ss_dssp SSEEEEEECCC
T ss_pred CCCCEEEECCc
Confidence 48999997753
No 483
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=87.53 E-value=0.56 Score=40.58 Aligned_cols=96 Identities=15% Similarity=0.042 Sum_probs=56.2
Q ss_pred CCCCeEEEEcc---ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc--cCCcc
Q 041509 39 NNAQLMVVACA---NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH--FREAD 113 (211)
Q Consensus 39 ~~~~~VLEi~G---tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l--~~~fD 113 (211)
.+.++||-+ | .++|..++.+|++. +.+|++++.+++..+.+++. +...-+.....|..+.+.++ ...+|
T Consensus 169 ~~g~~vlV~-gag~G~vG~~a~q~a~~~---Ga~Vi~~~~~~~~~~~~~~l--Ga~~~~~~~~~~~~~~v~~~t~~~g~d 242 (379)
T 3iup_A 169 LEGHSALVH-TAAASNLGQMLNQICLKD---GIKLVNIVRKQEQADLLKAQ--GAVHVCNAASPTFMQDLTEALVSTGAT 242 (379)
T ss_dssp HTTCSCEEE-SSTTSHHHHHHHHHHHHH---TCCEEEEESSHHHHHHHHHT--TCSCEEETTSTTHHHHHHHHHHHHCCC
T ss_pred cCCCEEEEE-CCCCCHHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHhC--CCcEEEeCCChHHHHHHHHHhcCCCce
Confidence 567788887 4 45777777788776 56899999999999988752 22222222223333433332 24799
Q ss_pred EEEEcCCcC-cHHHHHHHHHhc-CCCCcE
Q 041509 114 FVLIDCNLE-NHEGVLRAVQAG-NKPNGA 140 (211)
Q Consensus 114 ~VfiD~~~~-~y~~~l~~~~~~-L~pgG~ 140 (211)
+||-..... .....++.+... ++++|.
T Consensus 243 ~v~d~~g~~~~~~~~~~~l~~~~~r~~G~ 271 (379)
T 3iup_A 243 IAFDATGGGKLGGQILTCMEAALNKSARE 271 (379)
T ss_dssp EEEESCEEESHHHHHHHHHHHHHHTTCCS
T ss_pred EEEECCCchhhHHHHHHhcchhhhccccc
Confidence 887444333 234455554321 345443
No 484
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=87.45 E-value=2.6 Score=35.59 Aligned_cols=79 Identities=14% Similarity=0.199 Sum_probs=56.5
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCC-Cc-EEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH--hhhccCCccE
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQT-GG-RVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL--LLSHFREADF 114 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~-~g-~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~--l~~l~~~fD~ 114 (211)
.+.++||-. | |+|+.+.++++.+... +. +|+.++.++......++.+. ..+++++.+|..+. +......+|.
T Consensus 19 ~~~k~vlVT-G-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~D~ 94 (344)
T 2gn4_A 19 LDNQTILIT-G-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALEGVDI 94 (344)
T ss_dssp TTTCEEEEE-T-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred hCCCEEEEE-C-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHhcCCE
Confidence 456789988 5 4677888888777554 44 89999999887665555444 35799999998653 3334567999
Q ss_pred EEEcCCc
Q 041509 115 VLIDCNL 121 (211)
Q Consensus 115 VfiD~~~ 121 (211)
||..+..
T Consensus 95 Vih~Aa~ 101 (344)
T 2gn4_A 95 CIHAAAL 101 (344)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9988754
No 485
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=87.45 E-value=2.6 Score=34.37 Aligned_cols=79 Identities=8% Similarity=0.094 Sum_probs=53.7
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH--hhh-------ccC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL--LLS-------HFR 110 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~--l~~-------l~~ 110 (211)
..+++|-. |++.|. +..+++.+...+.+|+.++.+++.++.+.+.+.....++.++..|..+. +.. ..+
T Consensus 3 ~~k~~lVT-Gas~GI-G~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILIT-GASGGI-GEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEES-STTSHH-HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEe-CCccHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35778888 765443 4556665555578999999999888777776663345788888886432 111 136
Q ss_pred CccEEEEcCC
Q 041509 111 EADFVLIDCN 120 (211)
Q Consensus 111 ~fD~VfiD~~ 120 (211)
++|.++..+.
T Consensus 81 ~iD~lVnnAG 90 (264)
T 3tfo_A 81 RIDVLVNNAG 90 (264)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 8999998763
No 486
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=87.39 E-value=1.7 Score=35.88 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=54.1
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEE-EcchHHH--hhhccCCccEE
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFV-IGDAQSL--LLSHFREADFV 115 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~-~gda~e~--l~~l~~~fD~V 115 (211)
+.++||-. | |+|+.+.++++.+...+.+|++++.+++..+...+.+. ....+++++ .+|..+. +......+|.|
T Consensus 10 ~~~~vlVT-G-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVT-G-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp TTCEEEEE-T-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCEEEEE-C-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 45788888 5 46788888887776557799999999876655444433 112578888 7887643 22233478999
Q ss_pred EEcCC
Q 041509 116 LIDCN 120 (211)
Q Consensus 116 fiD~~ 120 (211)
|..+.
T Consensus 88 ih~A~ 92 (342)
T 1y1p_A 88 AHIAS 92 (342)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 98764
No 487
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.37 E-value=2.2 Score=38.21 Aligned_cols=94 Identities=10% Similarity=0.046 Sum_probs=60.5
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCCc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCNL 121 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~~ 121 (211)
.+|.-| |+| ..+..++..+...+-+|+.++.+++..+...+...+ ..+. ...+..+.+.. .++.|+|++-...
T Consensus 6 ~~IgvI-G~G--~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~--~gi~-~~~s~~e~v~~-l~~aDvVilavp~ 78 (474)
T 2iz1_A 6 ANFGVV-GMA--VMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQD--KNLV-FTKTLEEFVGS-LEKPRRIMLMVQA 78 (474)
T ss_dssp BSEEEE-CCS--HHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTT--SCEE-ECSSHHHHHHT-BCSSCEEEECCCT
T ss_pred CcEEEE-eeH--HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcC--CCeE-EeCCHHHHHhh-ccCCCEEEEEccC
Confidence 357777 764 444555555544456899999999888776654321 1233 23455555442 2468999998776
Q ss_pred C-cHHHHHHHHHhcCCCCcEEEE
Q 041509 122 E-NHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 122 ~-~y~~~l~~~~~~L~pgG~viv 143 (211)
. ...+.++.+.+.|+| |.+++
T Consensus 79 ~~~v~~vl~~l~~~l~~-g~iiI 100 (474)
T 2iz1_A 79 GAATDATIKSLLPLLDI-GDILI 100 (474)
T ss_dssp THHHHHHHHHHGGGCCT-TCEEE
T ss_pred chHHHHHHHHHHhhCCC-CCEEE
Confidence 4 567788888888887 45554
No 488
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=87.22 E-value=5.8 Score=28.48 Aligned_cols=76 Identities=14% Similarity=0.143 Sum_probs=50.9
Q ss_pred CcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEEEcCCcC--cHHHHHHHHHhcCCCCcEEEE
Q 041509 67 GGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVLIDCNLE--NHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 67 ~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv 143 (211)
..+|.-||-++...+..+..+....-.|. ...+..+.+..+ ..++|+|++|.... +-.+.++.+... .|.-.+++
T Consensus 14 ~~~ILivdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~-~~~~~ii~ 91 (153)
T 3hv2_A 14 RPEILLVDSQEVILQRLQQLLSPLPYTLH-FARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQ-YPSTTRIL 91 (153)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTSSCEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHH-CTTSEEEE
T ss_pred CceEEEECCCHHHHHHHHHHhcccCcEEE-EECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhH-CCCCeEEE
Confidence 46899999999999988888883222343 566776666544 46899999997654 445666666653 23334444
Q ss_pred E
Q 041509 144 G 144 (211)
Q Consensus 144 ~ 144 (211)
.
T Consensus 92 ~ 92 (153)
T 3hv2_A 92 L 92 (153)
T ss_dssp E
T ss_pred E
Confidence 3
No 489
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=87.21 E-value=3.1 Score=32.91 Aligned_cols=79 Identities=15% Similarity=0.132 Sum_probs=52.4
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcch--H------HHhhh---
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDA--Q------SLLLS--- 107 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda--~------e~l~~--- 107 (211)
+.+++|-. |++.| .+..+++.+...+.+|+.++.+++..+...+.++ ....++.++..|. . +....
T Consensus 13 ~~k~vlIT-Gas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 13 KGRVILVT-GAARG-IGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTCEEEES-STTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEe-CCCCh-HHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 55778888 65444 4556666665557899999999998887777776 3234567777665 1 11111
Q ss_pred ccCCccEEEEcCC
Q 041509 108 HFREADFVLIDCN 120 (211)
Q Consensus 108 l~~~fD~VfiD~~ 120 (211)
..+++|.++..+.
T Consensus 91 ~~g~id~lv~nAg 103 (247)
T 3i1j_A 91 EFGRLDGLLHNAS 103 (247)
T ss_dssp HHSCCSEEEECCC
T ss_pred hCCCCCEEEECCc
Confidence 1368999998764
No 490
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=87.18 E-value=7.4 Score=32.71 Aligned_cols=92 Identities=17% Similarity=0.083 Sum_probs=56.5
Q ss_pred eEEEEccccHHHHHHHHHHHccC-CCcEEEE-EeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEcCC
Q 041509 43 LMVVACANVANATTLALAAAAHQ-TGGRVVC-ILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLIDCN 120 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~-~~g~v~t-iE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD~~ 120 (211)
+|.=| |+|. .+..++.++.. ++.++++ +|.+++.++.+.+.+. +.-...|..+++. ....|+|++..+
T Consensus 4 rvgiI-G~G~--~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~-----~~~~~~~~~~ll~--~~~~D~V~i~tp 73 (344)
T 3ezy_A 4 RIGVI-GLGR--IGTIHAENLKMIDDAILYAISDVREDRLREMKEKLG-----VEKAYKDPHELIE--DPNVDAVLVCSS 73 (344)
T ss_dssp EEEEE-CCSH--HHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHT-----CSEEESSHHHHHH--CTTCCEEEECSC
T ss_pred EEEEE-cCCH--HHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhC-----CCceeCCHHHHhc--CCCCCEEEEcCC
Confidence 56778 7763 33445555533 3567775 5999987766554433 1124577777765 467999999887
Q ss_pred cCcHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 121 LENHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 121 ~~~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
.....++...+.+ .|.-++++-.+
T Consensus 74 ~~~h~~~~~~al~----~gk~v~~EKP~ 97 (344)
T 3ezy_A 74 TNTHSELVIACAK----AKKHVFCEKPL 97 (344)
T ss_dssp GGGHHHHHHHHHH----TTCEEEEESCS
T ss_pred CcchHHHHHHHHh----cCCeEEEECCC
Confidence 7766555555544 24444456543
No 491
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=87.18 E-value=8.4 Score=31.27 Aligned_cols=105 Identities=10% Similarity=0.047 Sum_probs=64.0
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCC-hhHHHHHHHHhcCCCCcEEEEEcchHHH------hhh---c
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRR-VEEYKLSKKILGLDASHVEFVIGDAQSL------LLS---H 108 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~-~~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~~---l 108 (211)
.+.+++|-. |++.| .+..+++.+...+.+|+.++.+ ++..+...+.++....++.++.+|..+. +.. .
T Consensus 29 l~gk~~lVT-Gas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 29 LAGKTAFVT-GGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp CTTCEEEEE-TTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEe-CCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356788988 76544 3455666655557889888655 4455555544542345788899886542 111 1
Q ss_pred cCCccEEEEcCCcC-----------cH-----------HHHHHHHHhcCCCCcEEEEEe
Q 041509 109 FREADFVLIDCNLE-----------NH-----------EGVLRAVQAGNKPNGAVVVGY 145 (211)
Q Consensus 109 ~~~fD~VfiD~~~~-----------~y-----------~~~l~~~~~~L~pgG~viv~d 145 (211)
.+++|.++..+... ++ ....+.+.+.++++|.++..-
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 35899999876321 11 234555667777778777654
No 492
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.13 E-value=3.1 Score=34.84 Aligned_cols=79 Identities=14% Similarity=0.062 Sum_probs=55.4
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc--CCCCcEEEEEcchHHH------hhh---c
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG--LDASHVEFVIGDAQSL------LLS---H 108 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~--~~~~~V~~~~gda~e~------l~~---l 108 (211)
..++||-. |++.| .+.++++.+...+.+|+.++.+++..+.+.+.+. +...++.++..|..+. +.. .
T Consensus 7 ~~k~vlVT-Gas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVT-GGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEE-TTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEc-CCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 45788888 75433 4566666665557899999999998887777665 3334799999986542 111 1
Q ss_pred cCCccEEEEcCC
Q 041509 109 FREADFVLIDCN 120 (211)
Q Consensus 109 ~~~fD~VfiD~~ 120 (211)
.+++|.++..+.
T Consensus 85 ~g~id~lv~nAg 96 (319)
T 3ioy_A 85 FGPVSILCNNAG 96 (319)
T ss_dssp TCCEEEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 368999998864
No 493
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=87.11 E-value=2.1 Score=35.48 Aligned_cols=88 Identities=14% Similarity=0.167 Sum_probs=57.7
Q ss_pred CeEEEEccccHHHHHHHHHHHccCCC---cEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhccCCccEEEEc
Q 041509 42 QLMVVACANVANATTLALAAAAHQTG---GRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSHFREADFVLID 118 (211)
Q Consensus 42 ~~VLEi~Gtg~G~stl~la~a~~~~~---g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l~~~fD~VfiD 118 (211)
.+|.=| |+| ..+..++..+...+ .+|+.+|.+++.++.+++.+. ++ ...|..+.+ ...|+||+-
T Consensus 4 ~~I~iI-G~G--~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~g-----i~-~~~~~~~~~----~~aDvVila 70 (280)
T 3tri_A 4 SNITFI-GGG--NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCG-----VH-TTQDNRQGA----LNADVVVLA 70 (280)
T ss_dssp SCEEEE-SCS--HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTC-----CE-EESCHHHHH----SSCSEEEEC
T ss_pred CEEEEE-ccc--HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcC-----CE-EeCChHHHH----hcCCeEEEE
Confidence 467778 775 44444454443322 279999999998877765432 22 234444443 357999998
Q ss_pred CCcCcHHHHHHHHHhc-CCCCcEEEE
Q 041509 119 CNLENHEGVLRAVQAG-NKPNGAVVV 143 (211)
Q Consensus 119 ~~~~~y~~~l~~~~~~-L~pgG~viv 143 (211)
-......+.++.+.+. +++ +.+++
T Consensus 71 v~p~~~~~vl~~l~~~~l~~-~~iii 95 (280)
T 3tri_A 71 VKPHQIKMVCEELKDILSET-KILVI 95 (280)
T ss_dssp SCGGGHHHHHHHHHHHHHTT-TCEEE
T ss_pred eCHHHHHHHHHHHHhhccCC-CeEEE
Confidence 8777788899999887 775 54555
No 494
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=87.09 E-value=2.6 Score=33.80 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=52.2
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhc-CCCCcEEEEEcch--HH------Hhhh---
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILG-LDASHVEFVIGDA--QS------LLLS--- 107 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~-~~~~~V~~~~gda--~e------~l~~--- 107 (211)
+.+++|-. |.+.| .+..+++.+...+.+|+.++.+++..+.+.+.+. ....++.++..|. .+ .+..
T Consensus 11 ~~k~vlVT-Gas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 11 NDRIILVT-GASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTCEEEEE-STTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEe-CCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 55788888 75444 3456666665557899999999988777766665 2134677888776 21 1111
Q ss_pred ccCCccEEEEcCC
Q 041509 108 HFREADFVLIDCN 120 (211)
Q Consensus 108 l~~~fD~VfiD~~ 120 (211)
..+++|.++..+.
T Consensus 89 ~~g~id~lv~nAg 101 (252)
T 3f1l_A 89 NYPRLDGVLHNAG 101 (252)
T ss_dssp HCSCCSEEEECCC
T ss_pred hCCCCCEEEECCc
Confidence 1468999998764
No 495
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=87.02 E-value=2.6 Score=34.01 Aligned_cols=79 Identities=13% Similarity=0.124 Sum_probs=53.6
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH------hhh---ccC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL------LLS---HFR 110 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~------l~~---l~~ 110 (211)
+.+++|-. |.+.|. +..+++.+...+.+|+.++.+++..+...+.+.....++.++..|..+. +.. ..+
T Consensus 11 ~~k~vlVT-Gas~gI-G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVT-GAAAGI-GRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEEC-SCSSHH-HHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEE-CCCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 45788888 655443 4555555544478999999999888777766663346789999886542 111 136
Q ss_pred CccEEEEcCC
Q 041509 111 EADFVLIDCN 120 (211)
Q Consensus 111 ~fD~VfiD~~ 120 (211)
++|.++..+.
T Consensus 89 ~id~lv~nAg 98 (256)
T 3gaf_A 89 KITVLVNNAG 98 (256)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 8999998763
No 496
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=87.02 E-value=4.4 Score=29.79 Aligned_cols=83 Identities=12% Similarity=0.037 Sum_probs=46.3
Q ss_pred ccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCC-cEEEEEcchHHHhhhc-cCCccEEEEcCCcC--cHH
Q 041509 50 NVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDAS-HVEFVIGDAQSLLLSH-FREADFVLIDCNLE--NHE 125 (211)
Q Consensus 50 tg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~-~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~--~y~ 125 (211)
.|+++.+.....-.. ..-+|.-||-++...+..+..+..... .+-....+..+.+..+ ...+|+|++|...+ +-.
T Consensus 9 ~~~~~~~~~~~~M~~-~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlvilD~~l~~~~g~ 87 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTD-RVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKAIELKPDVITMDIEMPNLNGI 87 (164)
T ss_dssp ----------------CCEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHHHCCSEEEECSSCSSSCHH
T ss_pred cccCCcccCcccccc-CccEEEEEcCCHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHhccCCCCEEEEeCCCCCCCHH
Confidence 455555554444322 246899999999999888888873222 2222466777766544 45799999997644 345
Q ss_pred HHHHHHHh
Q 041509 126 GVLRAVQA 133 (211)
Q Consensus 126 ~~l~~~~~ 133 (211)
+.++.+..
T Consensus 88 ~l~~~lr~ 95 (164)
T 3t8y_A 88 EALKLIMK 95 (164)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 56666655
No 497
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=86.97 E-value=4.5 Score=32.92 Aligned_cols=80 Identities=11% Similarity=0.032 Sum_probs=54.7
Q ss_pred CCCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCC---CCcEEEEEcchHHH------hhhc-
Q 041509 39 NNAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLD---ASHVEFVIGDAQSL------LLSH- 108 (211)
Q Consensus 39 ~~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~---~~~V~~~~gda~e~------l~~l- 108 (211)
.+.+++|-. |.+.| .+..+++.+...+.+|+.++.+++..+.+.+.++.. ..++.++.+|..+. +...
T Consensus 9 l~~k~vlVT-Gas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 9 FQDRTYLVT-GGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp CTTCEEEEE-TTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEe-CCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 356788888 65444 345666665555789999999998887777766621 23799999996542 1111
Q ss_pred --cCCccEEEEcCC
Q 041509 109 --FREADFVLIDCN 120 (211)
Q Consensus 109 --~~~fD~VfiD~~ 120 (211)
.+++|.++..+.
T Consensus 87 ~~~g~id~lv~nAg 100 (281)
T 3svt_A 87 AWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 368999998764
No 498
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=86.96 E-value=4.1 Score=32.99 Aligned_cols=79 Identities=5% Similarity=0.007 Sum_probs=54.0
Q ss_pred CCCeEEEEccccHHHHHHHHHHHccCCCcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHH--h----hh---ccC
Q 041509 40 NAQLMVVACANVANATTLALAAAAHQTGGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSL--L----LS---HFR 110 (211)
Q Consensus 40 ~~~~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~--l----~~---l~~ 110 (211)
..++||-. |.+ |..+..+++.+...+.+|+.++.+++..+...+.++....++.++.+|..+. + .. ..+
T Consensus 30 ~~k~vlIT-Gas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLIT-GAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEE-TTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEE-CCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 45778888 653 4456677766655578999999999877766655552235789999986542 1 11 135
Q ss_pred CccEEEEcCC
Q 041509 111 EADFVLIDCN 120 (211)
Q Consensus 111 ~fD~VfiD~~ 120 (211)
++|.++..+.
T Consensus 108 ~iD~li~~Ag 117 (272)
T 1yb1_A 108 DVSILVNNAG 117 (272)
T ss_dssp CCSEEEECCC
T ss_pred CCcEEEECCC
Confidence 8999998764
No 499
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.92 E-value=1.5 Score=36.52 Aligned_cols=98 Identities=14% Similarity=0.087 Sum_probs=57.3
Q ss_pred eEEEEccccHHHHHHHHHHHccCCCcEEEEEeC--ChhHHHHHHHHhcCC--C---CcEEEEEc-chHHHhhhccCCccE
Q 041509 43 LMVVACANVANATTLALAAAAHQTGGRVVCILR--RVEEYKLSKKILGLD--A---SHVEFVIG-DAQSLLLSHFREADF 114 (211)
Q Consensus 43 ~VLEi~Gtg~G~stl~la~a~~~~~g~v~tiE~--~~~~~~~Ar~~~~~~--~---~~V~~~~g-da~e~l~~l~~~fD~ 114 (211)
+|.=| |+| ..+..+|..+...+.+|+.++. +++..+..++.-... . .++....- +..+. -...|+
T Consensus 2 ~I~ii-G~G--~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~D~ 74 (335)
T 1txg_A 2 IVSIL-GAG--AMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC----LENAEV 74 (335)
T ss_dssp EEEEE-SCC--HHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH----HTTCSE
T ss_pred EEEEE-CcC--HHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHH----HhcCCE
Confidence 46667 764 4444455444333568999999 888776655432100 0 12222210 33232 246899
Q ss_pred EEEcCCcCcHHHHHHHHHhcCCCCcEEEEEecCC
Q 041509 115 VLIDCNLENHEGVLRAVQAGNKPNGAVVVGYNAF 148 (211)
Q Consensus 115 VfiD~~~~~y~~~l~~~~~~L~pgG~viv~dn~~ 148 (211)
||+........+.++.+.+ ++|+..++.+-|.+
T Consensus 75 vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 75 VLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp EEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSE
T ss_pred EEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcC
Confidence 9998877777888888988 88744444333444
No 500
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=86.89 E-value=6.8 Score=28.07 Aligned_cols=76 Identities=14% Similarity=0.071 Sum_probs=50.7
Q ss_pred CcEEEEEeCChhHHHHHHHHhcCCCCcEEEEEcchHHHhhhc-cCCccEEEEcCCcC--cHHHHHHHHHhcCCCCcEEEE
Q 041509 67 GGRVVCILRRVEEYKLSKKILGLDASHVEFVIGDAQSLLLSH-FREADFVLIDCNLE--NHEGVLRAVQAGNKPNGAVVV 143 (211)
Q Consensus 67 ~g~v~tiE~~~~~~~~Ar~~~~~~~~~V~~~~gda~e~l~~l-~~~fD~VfiD~~~~--~y~~~l~~~~~~L~pgG~viv 143 (211)
.-+|.-||-++...+..+..+....-.+. ...+..+.+..+ ..++|+|++|...+ +-.+.++.+...- |.-.+++
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~-~~~~ii~ 84 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLGCNII-TFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSY-PDIERVV 84 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEE-EESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHC-TTSEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcCCeEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhC-CCCcEEE
Confidence 46899999999999888888873223344 566777666544 45799999997654 4456666666532 3334444
Q ss_pred E
Q 041509 144 G 144 (211)
Q Consensus 144 ~ 144 (211)
.
T Consensus 85 l 85 (154)
T 2rjn_A 85 I 85 (154)
T ss_dssp E
T ss_pred E
Confidence 3
Done!