BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041511
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B1I1J7|RS17_DESAP 30S ribosomal protein S17 OS=Desulforudis audaxviator (strain
MP104C) GN=rpsQ PE=3 SV=1
Length = 85
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 61/75 (81%)
Query: 47 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSRPLSK 106
G VVS+KM K+VVVAVD L H +Y R V+RT KFMAHDE+N+C IGD+V++ +RPLS+
Sbjct: 11 GRVVSDKMDKTVVVAVDTLVKHPLYGRTVRRTRKFMAHDEDNQCRIGDKVKIAETRPLSR 70
Query: 107 HKHWLVAEILKKARI 121
HK W VAE+L++++I
Sbjct: 71 HKRWRVAEVLERSQI 85
>sp|Q7U4J1|RS17_SYNPX 30S ribosomal protein S17 OS=Synechococcus sp. (strain WH8102)
GN=rpsQ PE=3 SV=1
Length = 103
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 65/92 (70%), Gaps = 5/92 (5%)
Query: 42 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPS 101
+K VG VVS+KM+K+VVVAV+ F H +Y + V RT+++ AHDE+N C +GDRVR+ +
Sbjct: 3 VKERVGTVVSDKMEKTVVVAVESRFPHPIYQKTVSRTTRYKAHDEDNSCRVGDRVRITET 62
Query: 102 RPLSKHKHWLVAEILKKARIYVPPSADNAAAA 133
RP+S+HK W +AE+L + P AD +A +
Sbjct: 63 RPMSRHKRWAIAEVLSHS-----PKADKSAGS 89
>sp|A7HM43|RS17_FERNB 30S ribosomal protein S17 OS=Fervidobacterium nodosum (strain ATCC
35602 / DSM 5306 / Rt17-B1) GN=rpsQ PE=3 SV=1
Length = 100
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K +VG+VVS+KM K+V V V+RL H + +YVKRT KF AHDENN C +GD V ++ SR
Sbjct: 4 KRLVGVVVSDKMDKTVTVKVERLVKHAKFGKYVKRTKKFYAHDENNACRVGDVVEIEESR 63
Query: 103 PLSKHKHWLVAEILKKARIYVPPSADNA 130
PLSK K W+V IL+++++ P +
Sbjct: 64 PLSKLKRWVVVNILERSKLSETPEIEET 91
>sp|A4XLS1|RS17_CALS8 30S ribosomal protein S17 OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=rpsQ PE=3 SV=1
Length = 86
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 61/78 (78%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K+ +G+VVS+KM K+VVVAV+ L H +Y + +KRT+KF AHDENNEC +GD+V + +R
Sbjct: 9 KTRIGVVVSDKMDKTVVVAVETLVQHPLYKKTIKRTTKFKAHDENNECRVGDKVLIMETR 68
Query: 103 PLSKHKHWLVAEILKKAR 120
PLSK K W V +IL++A+
Sbjct: 69 PLSKEKRWRVVQILERAK 86
>sp|Q605C1|RS17_METCA 30S ribosomal protein S17 OS=Methylococcus capsulatus (strain ATCC
33009 / NCIMB 11132 / Bath) GN=rpsQ PE=3 SV=1
Length = 86
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 61/81 (75%)
Query: 39 PSQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRL 98
+++SV G VVSNKM +++VVA++R H +Y +Y++RT+K +AHDENNEC+IGD V L
Sbjct: 5 EGRVRSVTGRVVSNKMDRTIVVAIERQVSHPLYGKYIRRTTKVLAHDENNECSIGDLVTL 64
Query: 99 DPSRPLSKHKHWLVAEILKKA 119
SRP+SK K W + I+++A
Sbjct: 65 HASRPISKKKAWTLGAIVERA 85
>sp|B9MKH2|RS17_CALBD 30S ribosomal protein S17 OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=rpsQ PE=3 SV=1
Length = 86
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 61/78 (78%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K+ VG+VVS+KM K+VVVAV+R H +Y + +KRT+KF AHDENNEC +GD+V + +R
Sbjct: 9 KTRVGVVVSDKMDKTVVVAVERHVQHPLYKKTIKRTTKFKAHDENNECRVGDKVLIMETR 68
Query: 103 PLSKHKHWLVAEILKKAR 120
PLSK K W V +IL++A+
Sbjct: 69 PLSKEKRWRVVQILERAK 86
>sp|Q6LVA7|RS17_PHOPR 30S ribosomal protein S17 OS=Photobacterium profundum GN=rpsQ PE=3
SV=1
Length = 84
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 60/82 (73%)
Query: 40 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLD 99
Q + +G V+S+KM KS+VVA++R+ H +Y +Y+KRT+K AHDENNECN+GD V +
Sbjct: 3 EQTRIQLGRVISSKMDKSIVVAIERMVKHPMYGKYIKRTTKLHAHDENNECNLGDTVEVR 62
Query: 100 PSRPLSKHKHWLVAEILKKARI 121
RPLSK K W + I++KAR+
Sbjct: 63 ECRPLSKTKSWTLVRIVEKARV 84
>sp|A5D5G4|RS17_PELTS 30S ribosomal protein S17 OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=rpsQ PE=3 SV=1
Length = 87
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 58/83 (69%)
Query: 38 GPSQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVR 97
G K++ G VVSNKM K+VVVAV+ L H +Y R ++RT KF AHDE N C IGD+V+
Sbjct: 3 GRGIRKTLTGRVVSNKMDKTVVVAVETLVRHPLYQRTIRRTKKFKAHDEENACRIGDKVK 62
Query: 98 LDPSRPLSKHKHWLVAEILKKAR 120
+ +RPLSK K W V EIL++ +
Sbjct: 63 MMETRPLSKEKRWRVVEILERTK 85
>sp|Q8R7W3|RS17_THETN 30S ribosomal protein S17 OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 58/80 (72%)
Query: 40 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLD 99
Q K +G VVSNKMQK++VVAV+ F H +Y + VKRT K+ HDENN CN+GD V++
Sbjct: 4 GQRKVRIGTVVSNKMQKTIVVAVEDKFRHPLYGKIVKRTKKYKVHDENNICNVGDVVKIM 63
Query: 100 PSRPLSKHKHWLVAEILKKA 119
+RPLSK K W + E++KKA
Sbjct: 64 ETRPLSKEKRWRLVEVIKKA 83
>sp|B1LBN1|RS17_THESQ 30S ribosomal protein S17 OS=Thermotoga sp. (strain RQ2) GN=rpsQ
PE=3 SV=1
Length = 107
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K + G+VVS+KM K+VVVAV++L H +Y +YVKRT K+ AHDE NEC IGD V ++ +R
Sbjct: 4 KRLTGIVVSDKMDKTVVVAVEKLVQHTIYKKYVKRTKKYHAHDERNECKIGDVVEIEETR 63
Query: 103 PLSKHKHWLVAEILKK 118
PLSK K W V I+++
Sbjct: 64 PLSKTKRWRVVRIIQR 79
>sp|Q0ID14|RS17_SYNS3 30S ribosomal protein S17 OS=Synechococcus sp. (strain CC9311)
GN=rpsQ PE=3 SV=1
Length = 88
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 59/78 (75%)
Query: 42 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPS 101
+K VG VVS+KM K+VVVAV+ F H +Y + V RT+++ AHDE+N C +GDRVR+ +
Sbjct: 3 LKERVGTVVSDKMDKTVVVAVENRFPHPIYQKTVSRTTRYKAHDEDNACRVGDRVRITET 62
Query: 102 RPLSKHKHWLVAEILKKA 119
RPLS+HK W +AE+L ++
Sbjct: 63 RPLSRHKRWAIAEVLSQS 80
>sp|A8ZV66|RS17_DESOH 30S ribosomal protein S17 OS=Desulfococcus oleovorans (strain DSM
6200 / Hxd3) GN=rpsQ PE=3 SV=1
Length = 85
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 57/73 (78%)
Query: 47 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSRPLSK 106
G VVS+KM K+V+VAV+RL H+ Y +YV+RT+KF AHDE N+C +GD+V + SRPLS+
Sbjct: 12 GTVVSDKMDKTVIVAVERLVKHQEYKKYVRRTAKFAAHDEQNQCAVGDKVIITESRPLSR 71
Query: 107 HKHWLVAEILKKA 119
KHW V +++KA
Sbjct: 72 TKHWRVVNVVEKA 84
>sp|Q7MPH9|RS17_VIBVY 30S ribosomal protein S17 OS=Vibrio vulnificus (strain YJ016)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 62/81 (76%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
++++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENNEC IGD V +
Sbjct: 4 KIRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKARI 121
RPLSK K W + ++++KA+I
Sbjct: 64 CRPLSKTKSWTLVKVVEKAKI 84
>sp|Q8DE48|RS17_VIBVU 30S ribosomal protein S17 OS=Vibrio vulnificus (strain CMCP6)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 62/81 (76%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
++++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENNEC IGD V +
Sbjct: 4 KIRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKARI 121
RPLSK K W + ++++KA+I
Sbjct: 64 CRPLSKTKSWTLVKVVEKAKI 84
>sp|A5IM92|RS17_THEP1 30S ribosomal protein S17 OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=rpsQ PE=3 SV=1
Length = 107
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K + G+VVS+KM K+VVVAV++L H +Y +YVKRT K+ AHDE NEC IGD V ++ +R
Sbjct: 4 KRLTGIVVSDKMDKTVVVAVEKLVQHPIYKKYVKRTKKYHAHDERNECKIGDVVEIEETR 63
Query: 103 PLSKHKHWLVAEILKK 118
PLSK K W V I+++
Sbjct: 64 PLSKTKRWRVVRIIQR 79
>sp|C3LRP9|RS17_VIBCM 30S ribosomal protein S17 OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=rpsQ PE=3 SV=1
Length = 84
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 62/81 (76%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
++++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENNEC IGD V +
Sbjct: 4 KIRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKARI 121
RPLSK K W + +I++KA++
Sbjct: 64 CRPLSKTKSWTLVKIVEKAKM 84
>sp|Q9KNZ3|RS17_VIBCH 30S ribosomal protein S17 OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=rpsQ PE=3 SV=1
Length = 84
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 62/81 (76%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
++++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENNEC IGD V +
Sbjct: 4 KIRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKARI 121
RPLSK K W + +I++KA++
Sbjct: 64 CRPLSKTKSWTLVKIVEKAKM 84
>sp|A5F557|RS17_VIBC3 30S ribosomal protein S17 OS=Vibrio cholerae serotype O1 (strain
ATCC 39541 / Ogawa 395 / O395) GN=rpsQ PE=3 SV=1
Length = 84
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 62/81 (76%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
++++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENNEC IGD V +
Sbjct: 4 KIRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKARI 121
RPLSK K W + +I++KA++
Sbjct: 64 CRPLSKTKSWTLVKIVEKAKM 84
>sp|A7N0I6|RS17_VIBHB 30S ribosomal protein S17 OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=rpsQ PE=3 SV=1
Length = 84
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 57/75 (76%)
Query: 47 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSRPLSK 106
G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENNEC +GD V + RPLSK
Sbjct: 10 GRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGLGDTVEIAECRPLSK 69
Query: 107 HKHWLVAEILKKARI 121
K W + ++L+KA+I
Sbjct: 70 TKSWTLVKVLEKAKI 84
>sp|P38519|RS17_THEMA 30S ribosomal protein S17 OS=Thermotoga maritima (strain ATCC 43589
/ MSB8 / DSM 3109 / JCM 10099) GN=rpsQ PE=3 SV=2
Length = 107
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K + G+VVS+KM K+VVVAV++L H +Y +YVKRT K+ AHDE NEC IGD V ++ +R
Sbjct: 4 KRLTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDERNECKIGDVVEIEETR 63
Query: 103 PLSKHKHWLVAEILKK 118
PLSK K W V I+++
Sbjct: 64 PLSKTKRWRVVRIIQR 79
>sp|Q5E8A6|RS17_VIBF1 30S ribosomal protein S17 OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=rpsQ PE=3 SV=1
Length = 84
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 60/81 (74%)
Query: 40 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLD 99
+++++ G V+S+KM KS+VVA++R+ H +Y +Y+KRT+K AHDENNEC +GD V +
Sbjct: 3 EKIRTMQGRVISDKMDKSIVVAIERMVKHPIYGKYIKRTTKLHAHDENNECGLGDTVEIR 62
Query: 100 PSRPLSKHKHWLVAEILKKAR 120
RPLSK K W + I++KA+
Sbjct: 63 ECRPLSKTKSWTLVNIVEKAK 83
>sp|Q1LTC9|RS17_BAUCH 30S ribosomal protein S17 OS=Baumannia cicadellinicola subsp.
Homalodisca coagulata GN=rpsQ PE=3 SV=1
Length = 89
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 55/73 (75%)
Query: 47 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSRPLSK 106
G VVSNKM KS+VVA++R+ H +Y +Y+KRT+K AHDENN CNIGD + + RP+SK
Sbjct: 15 GRVVSNKMDKSIVVAIERIIKHPIYGKYIKRTTKIHAHDENNACNIGDLIEIKECRPISK 74
Query: 107 HKHWLVAEILKKA 119
K W++ I++KA
Sbjct: 75 TKSWILIRIIEKA 87
>sp|A5GIT6|RS17_SYNPW 30S ribosomal protein S17 OS=Synechococcus sp. (strain WH7803)
GN=rpsQ PE=3 SV=1
Length = 88
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%)
Query: 42 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPS 101
+K VG VVS+KM K+VVVAV+ F H +Y + V RT+++ AHDENN +GDRVR+ +
Sbjct: 3 LKERVGTVVSDKMDKTVVVAVENRFPHPIYQKTVSRTTRYKAHDENNSVRVGDRVRITET 62
Query: 102 RPLSKHKHWLVAEIL 116
RPLS+HK W VAE+L
Sbjct: 63 RPLSRHKRWAVAEVL 77
>sp|A6TEW3|RS17_KLEP7 30S ribosomal protein S17 OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=rpsQ PE=3
SV=1
Length = 84
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 60/79 (75%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
+++++ G VVS+KM+KS+VVA++R+ H VY +++KRT+K HDENNEC IGD+V +
Sbjct: 4 KIRTLQGRVVSDKMEKSIVVAIERMVKHPVYGKFIKRTTKLHVHDENNECGIGDKVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|Q67JV2|RS17_SYMTH 30S ribosomal protein S17 OS=Symbiobacterium thermophilum (strain T
/ IAM 14863) GN=rpsQ PE=3 SV=1
Length = 94
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 58/77 (75%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K+ VG+V S+KM K+VVVAV+ L H +Y + V+RT KF AHDE+N+C +GD+VR+ +R
Sbjct: 9 KTRVGVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDEHNQCKVGDKVRIMETR 68
Query: 103 PLSKHKHWLVAEILKKA 119
PLSK K W V EI++ A
Sbjct: 69 PLSKEKRWRVVEIIESA 85
>sp|B9K895|RS17_THENN 30S ribosomal protein S17 OS=Thermotoga neapolitana (strain ATCC
49049 / DSM 4359 / NS-E) GN=rpsQ PE=3 SV=1
Length = 112
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 58/76 (76%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K ++G+VVS+KM K+VVVAV+R H +Y +Y+KRT K+ AHDE NEC +GD V ++ +R
Sbjct: 4 KRMIGVVVSDKMDKTVVVAVERHVQHPLYKKYIKRTKKYHAHDEKNECRVGDVVEIEETR 63
Query: 103 PLSKHKHWLVAEILKK 118
PLSK K W V +I+K+
Sbjct: 64 PLSKTKRWRVVKIIKR 79
>sp|A0LIJ9|RS17_SYNFM 30S ribosomal protein S17 OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=rpsQ PE=3 SV=1
Length = 87
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 39 PSQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRL 98
S K+ VG V+SNKM K+VVV V+RL HH Y+++++R +KF AHD N C +GDRV +
Sbjct: 5 KSGRKTRVGRVLSNKMDKTVVVVVERLIHHPQYHKFIRRQNKFKAHDAQNACRVGDRVII 64
Query: 99 DPSRPLSKHKHWLVAEILKKARI 121
+ SRP+SK K W+V ++L KA I
Sbjct: 65 EESRPISKDKRWVVVQVLDKAVI 87
>sp|Q3AW84|RS17_SYNS9 30S ribosomal protein S17 OS=Synechococcus sp. (strain CC9902)
GN=rpsQ PE=3 SV=1
Length = 95
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 57/75 (76%)
Query: 42 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPS 101
+K VG VVS+KM+K+VVVAV+ F H +Y + V RT+++ AHDE+N C +GDRVR+ +
Sbjct: 3 VKERVGTVVSDKMEKTVVVAVETRFPHPIYQKTVSRTTRYKAHDEDNSCRVGDRVRITET 62
Query: 102 RPLSKHKHWLVAEIL 116
RP+S+ K W +AE+L
Sbjct: 63 RPMSRQKRWAIAEVL 77
>sp|A8F4S0|RS17_THELT 30S ribosomal protein S17 OS=Thermotoga lettingae (strain ATCC
BAA-301 / DSM 14385 / TMO) GN=rpsQ PE=3 SV=1
Length = 95
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 55/79 (69%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K + G+VVSNKM K+VVV V R H VY +Y++R+ K+ AHDE NEC GD V ++ +R
Sbjct: 4 KRLTGVVVSNKMDKTVVVEVTRKLEHPVYKKYIQRSKKYYAHDEKNECKAGDTVLIEETR 63
Query: 103 PLSKHKHWLVAEILKKARI 121
PLSK K W V E+LK+ I
Sbjct: 64 PLSKMKRWRVVEVLKREVI 82
>sp|Q3AMN9|RS17_SYNSC 30S ribosomal protein S17 OS=Synechococcus sp. (strain CC9605)
GN=rpsQ PE=3 SV=1
Length = 98
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 57/75 (76%)
Query: 42 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPS 101
+K +G VVS+KM+K+VVVAV+ F H +Y + V RT+++ AHDE+N C +GDRVR+ +
Sbjct: 3 VKERIGTVVSDKMEKTVVVAVESRFPHPIYQKTVSRTTRYKAHDEDNTCRVGDRVRITET 62
Query: 102 RPLSKHKHWLVAEIL 116
RP+S+ K W +AE+L
Sbjct: 63 RPMSRQKRWAIAEVL 77
>sp|B9M6G9|RS17_GEOSF 30S ribosomal protein S17 OS=Geobacter sp. (strain FRC-32) GN=rpsQ
PE=3 SV=1
Length = 85
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 58/76 (76%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K+ +G+VVS+KM K+VVV VDRL H VYN+Y+KR++K+ AHD +N C GDRV + +R
Sbjct: 8 KTQIGVVVSDKMDKTVVVKVDRLIKHSVYNKYIKRSAKYKAHDVDNSCKTGDRVLIVETR 67
Query: 103 PLSKHKHWLVAEILKK 118
P+SK K W V +I+++
Sbjct: 68 PMSKDKRWKVRQIIER 83
>sp|A5GVW9|RS17_SYNR3 30S ribosomal protein S17 OS=Synechococcus sp. (strain RCC307)
GN=rpsQ PE=3 SV=1
Length = 83
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 56/75 (74%)
Query: 42 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPS 101
+K VG VVS+KM+K+VVVAV+ F H +Y + V RT+++ HDE+N C +GDRVR+ +
Sbjct: 3 VKERVGTVVSDKMEKTVVVAVENRFPHPIYKKTVSRTTRYKVHDEDNRCQVGDRVRITET 62
Query: 102 RPLSKHKHWLVAEIL 116
RPLS+ K W VAEI+
Sbjct: 63 RPLSRSKRWAVAEIM 77
>sp|B0K5Q2|RS17_THEPX 30S ribosomal protein S17 OS=Thermoanaerobacter sp. (strain X514)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 46 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSRPLS 105
+G VVSNKMQK++VVAV+ H +Y + +KRT KF HDENN CN+GD V++ +RPLS
Sbjct: 10 IGTVVSNKMQKTIVVAVEDRVRHPLYGKTIKRTKKFKVHDENNVCNVGDIVKIMETRPLS 69
Query: 106 KHKHWLVAEILKKA 119
K K W + EI+K+A
Sbjct: 70 KEKRWRLVEIVKRA 83
>sp|B0KCK9|RS17_THEP3 30S ribosomal protein S17 OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=rpsQ PE=3 SV=1
Length = 84
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 46 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSRPLS 105
+G VVSNKMQK++VVAV+ H +Y + +KRT KF HDENN CN+GD V++ +RPLS
Sbjct: 10 IGTVVSNKMQKTIVVAVEDRVRHPLYGKTIKRTKKFKVHDENNVCNVGDIVKIMETRPLS 69
Query: 106 KHKHWLVAEILKKA 119
K K W + EI+K+A
Sbjct: 70 KEKRWRLVEIVKRA 83
>sp|A7HBM7|RS17_ANADF 30S ribosomal protein S17 OS=Anaeromyxobacter sp. (strain Fw109-5)
GN=rpsQ PE=3 SV=1
Length = 85
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 56/79 (70%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
KS +G+VVSNKM K+VVV V+R Y + VKR K+ AHDENN C IGD+VR+ +R
Sbjct: 7 KSRIGVVVSNKMAKTVVVKVERRVADPKYGKIVKRAEKYKAHDENNACQIGDKVRIVETR 66
Query: 103 PLSKHKHWLVAEILKKARI 121
P+SK K W +AE L+KA +
Sbjct: 67 PMSKDKRWRIAETLEKAEV 85
>sp|Q87T04|RS17_VIBPA 30S ribosomal protein S17 OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=rpsQ PE=3 SV=1
Length = 84
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 55/75 (73%)
Query: 47 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSRPLSK 106
G VVS+KM KS+ VA++R H +Y ++VKRT+K AHDENNEC IGD V + RPLSK
Sbjct: 10 GRVVSDKMDKSITVAIERFVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIAECRPLSK 69
Query: 107 HKHWLVAEILKKARI 121
K W + ++++KA++
Sbjct: 70 TKSWTLVKVVEKAKM 84
>sp|Q11QC1|RS17_CYTH3 30S ribosomal protein S17 OS=Cytophaga hutchinsonii (strain ATCC
33406 / NCIMB 9469) GN=rpsQ PE=3 SV=1
Length = 87
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 43 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDPSR 102
K G VVSNKM KS+ VAV+R H Y +++ +T+K MAHDEN EC IGD VR+ +R
Sbjct: 10 KERTGKVVSNKMNKSITVAVERKVKHAKYGKFIHKTTKLMAHDENQECGIGDTVRVMETR 69
Query: 103 PLSKHKHWLVAEILKKAR 120
PLSK K W + E+++KA+
Sbjct: 70 PLSKLKRWRLVEVIEKAK 87
>sp|A4WFB9|RS17_ENT38 30S ribosomal protein S17 OS=Enterobacter sp. (strain 638) GN=rpsQ
PE=3 SV=1
Length = 84
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 59/80 (73%)
Query: 40 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLD 99
+++++ G VVS+KM+KS+VVA++R+ H +Y +++KRT+K HDENNEC IGD V +
Sbjct: 3 DKIRTLQGRVVSDKMEKSIVVAIERIVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIH 62
Query: 100 PSRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 63 ECRPLSKTKSWTLVRVVEKA 82
>sp|B1JIX0|RS17_YERPY 30S ribosomal protein S17 OS=Yersinia pseudotuberculosis serotype
O:3 (strain YPIII) GN=rpsQ PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENNEC IGD V +
Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|Q664T0|RS17_YERPS 30S ribosomal protein S17 OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=rpsQ PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENNEC IGD V +
Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|A4TH01|RS17_YERPP 30S ribosomal protein S17 OS=Yersinia pestis (strain Pestoides F)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENNEC IGD V +
Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|Q1CCV3|RS17_YERPN 30S ribosomal protein S17 OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=rpsQ PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENNEC IGD V +
Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|Q8ZJA3|RS17_YERPE 30S ribosomal protein S17 OS=Yersinia pestis GN=rpsQ PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENNEC IGD V +
Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|B2K5M1|RS17_YERPB 30S ribosomal protein S17 OS=Yersinia pseudotuberculosis serotype
IB (strain PB1/+) GN=rpsQ PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENNEC IGD V +
Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|Q1C2V6|RS17_YERPA 30S ribosomal protein S17 OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=rpsQ PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENNEC IGD V +
Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|A1JS24|RS17_YERE8 30S ribosomal protein S17 OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=rpsQ PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
Q++++ G VVS+KM+KS+VVA++R+ H +Y ++++RT+K HDENNEC IGD V +
Sbjct: 4 QIRTLQGRVVSDKMEKSMVVAIERVVKHPIYGKFIRRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|Q3YWU8|RS17_SHISS 30S ribosomal protein S17 OS=Shigella sonnei (strain Ss046) GN=rpsQ
PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
+++++ G VVS+KM+KS+VVA++R H +Y +++KRT+K HDENNEC IGD V +
Sbjct: 4 KIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|P0AG66|RS17_SHIFL 30S ribosomal protein S17 OS=Shigella flexneri GN=rpsQ PE=3 SV=2
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
+++++ G VVS+KM+KS+VVA++R H +Y +++KRT+K HDENNEC IGD V +
Sbjct: 4 KIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|Q0SZZ1|RS17_SHIF8 30S ribosomal protein S17 OS=Shigella flexneri serotype 5b (strain
8401) GN=rpsQ PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
+++++ G VVS+KM+KS+VVA++R H +Y +++KRT+K HDENNEC IGD V +
Sbjct: 4 KIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
>sp|Q32B40|RS17_SHIDS 30S ribosomal protein S17 OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=rpsQ PE=3 SV=1
Length = 84
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 41 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNECNIGDRVRLDP 100
+++++ G VVS+KM+KS+VVA++R H +Y +++KRT+K HDENNEC IGD V +
Sbjct: 4 KIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRE 63
Query: 101 SRPLSKHKHWLVAEILKKA 119
RPLSK K W + +++KA
Sbjct: 64 CRPLSKTKSWTLVRVVEKA 82
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,823,455
Number of Sequences: 539616
Number of extensions: 1852758
Number of successful extensions: 5311
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 4481
Number of HSP's gapped (non-prelim): 799
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)