Query 041513
Match_columns 294
No_of_seqs 327 out of 1875
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 13:17:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041513.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041513hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.2 1.3E-11 4.4E-16 112.3 3.7 74 9-85 63-136 (257)
2 2ld4_A Anamorsin; methyltransf 99.1 5.6E-11 1.9E-15 99.9 5.9 73 13-85 26-102 (176)
3 1vl5_A Unknown conserved prote 99.0 2.2E-10 7.7E-15 101.8 5.9 76 9-85 61-141 (260)
4 2gs9_A Hypothetical protein TT 99.0 4.6E-10 1.6E-14 96.4 6.8 76 9-85 58-133 (211)
5 3h2b_A SAM-dependent methyltra 99.0 4.3E-10 1.5E-14 96.0 5.9 110 9-125 65-180 (203)
6 2aot_A HMT, histamine N-methyl 99.0 2.2E-10 7.7E-15 104.3 3.2 75 9-84 84-172 (292)
7 3dh0_A SAM dependent methyltra 98.9 3.2E-09 1.1E-13 91.5 10.0 121 9-135 64-194 (219)
8 2p7i_A Hypothetical protein; p 98.9 7.2E-10 2.5E-14 96.4 5.6 75 9-85 66-142 (250)
9 1pjz_A Thiopurine S-methyltran 98.9 4.3E-10 1.5E-14 97.5 3.9 76 8-83 45-139 (203)
10 2yqz_A Hypothetical protein TT 98.9 1.2E-09 4.1E-14 96.4 6.8 74 9-83 63-140 (263)
11 3dlc_A Putative S-adenosyl-L-m 98.9 1.6E-09 5.5E-14 92.5 7.2 78 7-85 66-149 (219)
12 3hnr_A Probable methyltransfer 98.9 5.3E-09 1.8E-13 90.1 10.5 75 9-85 69-146 (220)
13 3ccf_A Cyclopropane-fatty-acyl 98.9 1.7E-09 6E-14 97.3 7.4 75 9-85 81-155 (279)
14 2p35_A Trans-aconitate 2-methy 98.9 1.2E-09 3.9E-14 96.5 5.9 75 9-85 59-133 (259)
15 3jwg_A HEN1, methyltransferase 98.9 6.3E-09 2.2E-13 89.9 10.5 123 8-136 54-212 (219)
16 3i9f_A Putative type 11 methyl 98.9 7.7E-09 2.6E-13 85.7 10.2 72 9-84 41-112 (170)
17 3g5l_A Putative S-adenosylmeth 98.9 1.5E-09 5.1E-14 96.0 5.9 75 9-84 69-145 (253)
18 3l8d_A Methyltransferase; stru 98.9 1.9E-09 6.4E-14 94.2 6.4 75 9-84 77-153 (242)
19 2o57_A Putative sarcosine dime 98.9 1.5E-09 5E-14 98.4 5.7 76 9-85 107-188 (297)
20 3ujc_A Phosphoethanolamine N-m 98.9 1.7E-09 5.8E-14 95.4 5.9 78 8-85 79-160 (266)
21 4gek_A TRNA (CMO5U34)-methyltr 98.9 1.8E-09 6.2E-14 98.0 5.8 74 9-85 98-179 (261)
22 3f4k_A Putative methyltransfer 98.9 3E-09 1E-13 93.8 6.9 75 9-85 71-151 (257)
23 1xxl_A YCGJ protein; structura 98.9 2.2E-09 7.6E-14 94.6 5.9 76 9-85 45-125 (239)
24 3bus_A REBM, methyltransferase 98.9 3.2E-09 1.1E-13 94.7 7.0 77 8-85 85-167 (273)
25 2avn_A Ubiquinone/menaquinone 98.8 2E-09 6.8E-14 96.1 5.3 76 9-85 78-153 (260)
26 3lcc_A Putative methyl chlorid 98.8 1.1E-08 3.9E-13 89.4 10.0 108 9-124 90-204 (235)
27 2p8j_A S-adenosylmethionine-de 98.8 2.5E-09 8.4E-14 91.4 5.5 77 9-85 48-129 (209)
28 1nkv_A Hypothetical protein YJ 98.8 2.7E-09 9.2E-14 94.1 5.7 75 9-85 61-141 (256)
29 3kkz_A Uncharacterized protein 98.8 5.1E-09 1.8E-13 93.5 6.9 75 9-85 71-151 (267)
30 3g5t_A Trans-aconitate 3-methy 98.8 3.9E-09 1.3E-13 96.1 6.1 75 8-84 62-149 (299)
31 1xtp_A LMAJ004091AAA; SGPP, st 98.8 2.9E-09 1E-13 93.6 4.8 77 9-85 118-198 (254)
32 4fsd_A Arsenic methyltransfera 98.8 4.8E-09 1.7E-13 99.7 6.5 75 9-84 110-203 (383)
33 3bkw_A MLL3908 protein, S-aden 98.8 5.5E-09 1.9E-13 91.1 6.0 76 9-85 68-145 (243)
34 3dli_A Methyltransferase; PSI- 98.8 3.5E-09 1.2E-13 93.1 4.5 74 9-85 65-141 (240)
35 3ocj_A Putative exported prote 98.8 3.2E-08 1.1E-12 90.5 11.0 75 8-84 144-227 (305)
36 2gb4_A Thiopurine S-methyltran 98.8 7.4E-09 2.5E-13 93.5 6.7 75 9-83 92-190 (252)
37 3ege_A Putative methyltransfer 98.8 4.8E-09 1.6E-13 93.8 5.4 74 9-85 58-131 (261)
38 3ou2_A SAM-dependent methyltra 98.8 7.2E-09 2.4E-13 88.7 5.6 76 9-85 70-147 (218)
39 2vdw_A Vaccinia virus capping 98.8 4.2E-09 1.4E-13 97.6 4.4 77 9-85 73-170 (302)
40 4htf_A S-adenosylmethionine-de 98.7 5.8E-09 2E-13 94.0 4.6 76 9-85 92-174 (285)
41 1vlm_A SAM-dependent methyltra 98.7 1.1E-08 3.7E-13 88.9 6.1 72 11-85 69-140 (219)
42 3vc1_A Geranyl diphosphate 2-C 98.7 1.2E-08 4E-13 93.7 6.6 76 8-85 141-222 (312)
43 3jwh_A HEN1; methyltransferase 98.7 2.5E-08 8.4E-13 86.2 8.2 75 9-84 55-141 (217)
44 3dtn_A Putative methyltransfer 98.7 1.1E-08 3.8E-13 89.1 6.0 76 8-85 69-149 (234)
45 3ofk_A Nodulation protein S; N 98.7 1.4E-08 4.9E-13 87.3 6.5 75 9-85 75-155 (216)
46 3cgg_A SAM-dependent methyltra 98.7 6.1E-08 2.1E-12 80.9 10.2 77 9-85 70-148 (195)
47 3mgg_A Methyltransferase; NYSG 98.7 1.3E-08 4.5E-13 90.9 6.3 76 9-85 63-143 (276)
48 3sm3_A SAM-dependent methyltra 98.7 1.7E-08 5.9E-13 87.1 6.8 76 9-85 54-142 (235)
49 3pfg_A N-methyltransferase; N, 98.7 1.2E-08 4E-13 90.8 5.8 75 9-84 74-151 (263)
50 2g72_A Phenylethanolamine N-me 98.7 7.2E-09 2.5E-13 93.9 4.0 76 9-84 96-215 (289)
51 2ex4_A Adrenal gland protein A 98.7 1E-08 3.5E-13 90.2 4.6 76 9-85 104-186 (241)
52 3gu3_A Methyltransferase; alph 98.7 2.2E-08 7.7E-13 90.6 6.3 77 8-86 48-128 (284)
53 3thr_A Glycine N-methyltransfe 98.7 8.5E-09 2.9E-13 93.0 3.5 77 9-85 81-176 (293)
54 3e23_A Uncharacterized protein 98.7 9.3E-09 3.2E-13 88.4 3.6 76 9-86 67-143 (211)
55 2kw5_A SLR1183 protein; struct 98.7 3.9E-08 1.3E-12 83.7 7.1 75 9-85 53-132 (202)
56 3cc8_A Putative methyltransfer 98.6 2.4E-08 8.1E-13 85.8 5.6 76 8-86 55-132 (230)
57 2pxx_A Uncharacterized protein 98.6 1.8E-08 6.1E-13 85.8 4.1 77 9-85 67-160 (215)
58 3e8s_A Putative SAM dependent 98.6 1.7E-08 5.8E-13 86.5 4.0 74 9-85 76-153 (227)
59 1y8c_A S-adenosylmethionine-de 98.6 2.6E-08 9.1E-13 86.5 5.2 76 9-85 61-143 (246)
60 2a14_A Indolethylamine N-methy 98.6 8.6E-09 3E-13 92.6 2.0 76 9-84 80-197 (263)
61 3bxo_A N,N-dimethyltransferase 98.6 3.6E-08 1.2E-12 85.6 5.8 76 9-85 64-142 (239)
62 2xvm_A Tellurite resistance pr 98.6 4.6E-08 1.6E-12 82.4 6.2 75 9-84 56-136 (199)
63 1ve3_A Hypothetical protein PH 98.6 2.4E-08 8E-13 86.1 4.4 77 9-85 62-143 (227)
64 1kpg_A CFA synthase;, cyclopro 98.6 7.6E-08 2.6E-12 86.6 7.7 74 9-85 89-169 (287)
65 1ri5_A MRNA capping enzyme; me 98.6 2E-08 6.8E-13 90.1 3.7 77 9-85 89-175 (298)
66 4e2x_A TCAB9; kijanose, tetron 98.6 6.3E-09 2.1E-13 99.3 -0.7 76 9-85 131-209 (416)
67 3bgv_A MRNA CAP guanine-N7 met 98.5 2.9E-08 9.8E-13 91.0 3.4 76 9-85 59-156 (313)
68 1zx0_A Guanidinoacetate N-meth 98.5 2.4E-08 8.4E-13 87.7 2.8 75 9-84 85-170 (236)
69 2i62_A Nicotinamide N-methyltr 98.5 5E-08 1.7E-12 86.0 4.1 76 9-84 81-198 (265)
70 1p91_A Ribosomal RNA large sub 98.5 6.4E-08 2.2E-12 86.3 4.5 69 9-85 111-179 (269)
71 2fk8_A Methoxy mycolic acid sy 98.5 1.9E-07 6.5E-12 85.5 7.1 74 9-85 115-195 (318)
72 1af7_A Chemotaxis receptor met 98.5 1.3E-07 4.5E-12 86.8 5.9 77 8-84 138-252 (274)
73 3d2l_A SAM-dependent methyltra 98.5 1E-07 3.5E-12 82.9 5.0 76 9-85 56-138 (243)
74 3g2m_A PCZA361.24; SAM-depende 98.5 6.6E-08 2.3E-12 87.9 3.7 76 9-85 106-191 (299)
75 3m70_A Tellurite resistance pr 98.5 1.6E-07 5.6E-12 84.5 6.2 75 9-84 144-223 (286)
76 3hem_A Cyclopropane-fatty-acyl 98.5 2.6E-07 8.9E-12 84.1 7.5 75 8-85 96-184 (302)
77 1dus_A MJ0882; hypothetical pr 98.5 6E-07 2E-11 74.7 9.1 76 9-85 76-158 (194)
78 3orh_A Guanidinoacetate N-meth 98.5 3.6E-08 1.2E-12 87.5 1.7 75 9-84 85-170 (236)
79 2zfu_A Nucleomethylin, cerebra 98.5 7.6E-07 2.6E-11 76.5 10.0 89 30-135 99-192 (215)
80 3g07_A 7SK snRNA methylphospha 98.4 1.2E-07 4.1E-12 86.6 5.0 56 30-85 156-221 (292)
81 2qe6_A Uncharacterized protein 98.4 2.6E-07 8.8E-12 84.2 6.6 77 9-85 106-197 (274)
82 3ggd_A SAM-dependent methyltra 98.4 1.4E-07 4.8E-12 82.7 3.9 77 9-85 80-164 (245)
83 1yzh_A TRNA (guanine-N(7)-)-me 98.4 1.9E-06 6.4E-11 74.5 10.7 76 9-85 67-157 (214)
84 3m33_A Uncharacterized protein 98.4 1.5E-07 5.2E-12 82.2 3.4 67 9-82 72-140 (226)
85 3mti_A RRNA methylase; SAM-dep 98.3 5E-07 1.7E-11 75.8 5.9 78 8-85 45-136 (185)
86 2fca_A TRNA (guanine-N(7)-)-me 98.3 2.3E-06 7.7E-11 74.5 10.2 76 9-85 64-154 (213)
87 3hp7_A Hemolysin, putative; st 98.3 1E-06 3.4E-11 81.8 8.3 111 9-123 110-228 (291)
88 1wzn_A SAM-dependent methyltra 98.3 4.2E-07 1.4E-11 79.9 5.5 76 9-85 65-146 (252)
89 3hm2_A Precorrin-6Y C5,15-meth 98.3 2.6E-06 8.8E-11 70.4 9.7 73 8-85 50-128 (178)
90 3htx_A HEN1; HEN1, small RNA m 98.3 2.7E-06 9.3E-11 88.9 11.0 76 9-85 748-835 (950)
91 3fpf_A Mtnas, putative unchara 98.3 9.8E-07 3.3E-11 82.2 6.8 72 8-85 147-223 (298)
92 3mq2_A 16S rRNA methyltransfer 98.2 8E-07 2.7E-11 76.6 5.2 112 8-123 52-180 (218)
93 3dmg_A Probable ribosomal RNA 98.2 1.2E-06 4E-11 83.9 6.5 78 9-86 257-342 (381)
94 3dxy_A TRNA (guanine-N(7)-)-me 98.2 6E-07 2E-11 79.0 3.7 76 9-85 60-151 (218)
95 3evz_A Methyltransferase; NYSG 98.2 7.8E-06 2.7E-10 70.8 10.8 78 8-85 80-180 (230)
96 3bkx_A SAM-dependent methyltra 98.2 8.8E-07 3E-11 78.8 4.6 76 9-85 70-160 (275)
97 1xdz_A Methyltransferase GIDB; 98.2 2.7E-06 9.2E-11 75.0 7.5 71 9-84 96-174 (240)
98 3sso_A Methyltransferase; macr 98.2 2.7E-07 9.4E-12 89.4 1.1 70 9-84 249-324 (419)
99 3i53_A O-methyltransferase; CO 98.2 2.1E-06 7.1E-11 79.3 6.9 74 9-85 195-275 (332)
100 3dp7_A SAM-dependent methyltra 98.2 1.9E-06 6.4E-11 81.1 6.7 75 9-85 205-288 (363)
101 3p9n_A Possible methyltransfer 98.2 1.2E-06 4.2E-11 74.1 4.7 77 9-85 69-154 (189)
102 3iv6_A Putative Zn-dependent a 98.2 1.1E-06 3.8E-11 80.2 4.7 75 9-85 69-149 (261)
103 3e05_A Precorrin-6Y C5,15-meth 98.2 1.4E-05 4.9E-10 68.1 11.3 73 9-85 66-143 (204)
104 2r3s_A Uncharacterized protein 98.2 1.3E-06 4.4E-11 80.2 4.6 75 9-85 191-272 (335)
105 3njr_A Precorrin-6Y methylase; 98.1 1.2E-05 4E-10 69.6 10.2 71 9-85 79-155 (204)
106 3ckk_A TRNA (guanine-N(7)-)-me 98.1 1.8E-06 6E-11 76.9 5.0 76 9-85 72-169 (235)
107 3eey_A Putative rRNA methylase 98.1 1.6E-06 5.6E-11 73.4 4.2 76 9-84 49-139 (197)
108 3grz_A L11 mtase, ribosomal pr 98.1 2.8E-06 9.5E-11 72.5 5.5 93 9-124 85-182 (205)
109 3lbf_A Protein-L-isoaspartate 98.1 2.8E-06 9.4E-11 72.7 5.4 71 9-86 101-176 (210)
110 3giw_A Protein of unknown func 98.1 1.7E-06 5.8E-11 79.8 3.4 75 9-84 107-200 (277)
111 3q7e_A Protein arginine N-meth 98.0 4.4E-06 1.5E-10 78.5 5.9 75 9-84 91-173 (349)
112 1nt2_A Fibrillarin-like PRE-rR 98.0 5.7E-06 2E-10 72.2 6.2 71 9-84 83-161 (210)
113 3uwp_A Histone-lysine N-methyl 98.0 1.7E-06 5.9E-11 84.2 3.1 74 10-85 200-289 (438)
114 3gwz_A MMCR; methyltransferase 98.0 6.8E-06 2.3E-10 77.4 7.2 74 9-85 228-308 (369)
115 2pjd_A Ribosomal RNA small sub 98.0 4.1E-06 1.4E-10 78.3 4.9 75 9-85 222-304 (343)
116 1i9g_A Hypothetical protein RV 98.0 1.1E-05 3.9E-10 72.0 7.5 71 9-85 126-204 (280)
117 1qzz_A RDMB, aclacinomycin-10- 98.0 5.7E-06 1.9E-10 77.3 5.7 74 9-85 208-288 (374)
118 2ift_A Putative methylase HI07 98.0 4.2E-06 1.4E-10 72.0 4.4 77 9-87 78-166 (201)
119 2pwy_A TRNA (adenine-N(1)-)-me 98.0 1.7E-05 5.7E-10 69.6 8.2 71 9-85 123-199 (258)
120 3mcz_A O-methyltransferase; ad 98.0 1.7E-05 5.8E-10 73.5 8.7 75 9-84 205-287 (352)
121 1vbf_A 231AA long hypothetical 98.0 4.9E-06 1.7E-10 72.2 4.6 71 9-86 94-167 (231)
122 1x19_A CRTF-related protein; m 98.0 7.4E-06 2.5E-10 76.5 6.1 73 9-84 216-295 (359)
123 1yb2_A Hypothetical protein TA 98.0 2.1E-05 7.2E-10 70.8 8.5 71 9-86 137-213 (275)
124 3g89_A Ribosomal RNA small sub 97.9 1.1E-05 3.9E-10 72.2 6.6 72 9-85 106-185 (249)
125 2fyt_A Protein arginine N-meth 97.9 6.1E-06 2.1E-10 77.3 4.5 72 9-82 89-169 (340)
126 1fbn_A MJ fibrillarin homologu 97.9 1.3E-05 4.3E-10 70.2 6.2 68 9-83 100-177 (230)
127 2ip2_A Probable phenazine-spec 97.9 8.8E-06 3E-10 74.9 5.3 74 9-85 193-273 (334)
128 2yxd_A Probable cobalt-precorr 97.9 3.7E-05 1.3E-09 63.2 8.5 69 9-85 59-132 (183)
129 4df3_A Fibrillarin-like rRNA/T 97.9 1.1E-05 3.7E-10 72.5 5.3 72 10-84 105-182 (233)
130 1l3i_A Precorrin-6Y methyltran 97.9 1.9E-05 6.5E-10 65.3 6.2 72 9-85 57-135 (192)
131 3lpm_A Putative methyltransfer 97.9 3.2E-05 1.1E-09 68.9 8.0 78 9-86 74-178 (259)
132 3gdh_A Trimethylguanosine synt 97.9 5.7E-07 1.9E-11 78.8 -3.6 75 8-84 101-181 (241)
133 3mb5_A SAM-dependent methyltra 97.9 3.4E-05 1.2E-09 67.9 7.9 70 9-85 120-195 (255)
134 3q87_B N6 adenine specific DNA 97.8 2.5E-05 8.7E-10 65.3 6.6 71 9-85 46-124 (170)
135 3p2e_A 16S rRNA methylase; met 97.8 5.6E-06 1.9E-10 73.1 2.6 76 8-83 49-138 (225)
136 2fpo_A Methylase YHHF; structu 97.8 1.4E-05 4.8E-10 68.8 5.0 76 9-86 79-162 (202)
137 1dl5_A Protein-L-isoaspartate 97.8 1.3E-05 4.5E-10 73.9 5.2 71 9-86 102-177 (317)
138 1tw3_A COMT, carminomycin 4-O- 97.8 1.2E-05 4.1E-10 74.8 4.8 75 9-86 209-290 (360)
139 1jsx_A Glucose-inhibited divis 97.8 2.3E-05 8E-10 66.5 6.1 71 9-85 91-166 (207)
140 2b3t_A Protein methyltransfera 97.8 4.6E-05 1.6E-09 68.5 8.3 76 9-85 135-239 (276)
141 1fp1_D Isoliquiritigenin 2'-O- 97.8 6.2E-06 2.1E-10 77.6 2.6 70 9-84 235-306 (372)
142 4dcm_A Ribosomal RNA large sub 97.8 4.1E-05 1.4E-09 72.8 8.3 106 9-133 248-365 (375)
143 1ixk_A Methyltransferase; open 97.8 3.5E-05 1.2E-09 71.3 7.6 77 9-86 145-248 (315)
144 1ej0_A FTSJ; methyltransferase 97.8 3.6E-06 1.2E-10 68.4 0.7 56 29-85 63-137 (180)
145 2ozv_A Hypothetical protein AT 97.8 2.7E-05 9.1E-10 69.9 6.4 78 8-85 61-171 (260)
146 2ipx_A RRNA 2'-O-methyltransfe 97.8 2.2E-05 7.4E-10 68.6 5.6 73 9-85 104-183 (233)
147 1i1n_A Protein-L-isoaspartate 97.8 2E-05 6.8E-10 68.1 5.3 71 9-86 104-184 (226)
148 3reo_A (ISO)eugenol O-methyltr 97.8 1.3E-05 4.3E-10 75.7 4.2 72 9-85 229-301 (368)
149 3tfw_A Putative O-methyltransf 97.8 0.00014 4.7E-09 64.6 10.6 74 8-85 89-171 (248)
150 2yxe_A Protein-L-isoaspartate 97.8 1.9E-05 6.4E-10 67.6 4.6 70 9-86 104-179 (215)
151 3r0q_C Probable protein argini 97.8 1.3E-05 4.5E-10 76.0 3.9 73 9-84 88-169 (376)
152 1fp2_A Isoflavone O-methyltran 97.7 1.4E-05 4.8E-10 74.4 3.9 71 9-85 214-289 (352)
153 1ws6_A Methyltransferase; stru 97.7 5.6E-06 1.9E-10 67.8 0.8 74 10-86 66-149 (171)
154 2yvl_A TRMI protein, hypotheti 97.7 5.8E-05 2E-09 65.7 7.2 71 9-85 115-191 (248)
155 3p9c_A Caffeic acid O-methyltr 97.7 1.8E-05 6.2E-10 74.6 4.1 71 10-85 228-299 (364)
156 2fhp_A Methylase, putative; al 97.7 1.2E-05 4.2E-10 66.8 2.5 75 9-85 69-155 (187)
157 1r18_A Protein-L-isoaspartate( 97.7 2.7E-05 9.3E-10 67.7 4.7 69 9-85 116-195 (227)
158 1g6q_1 HnRNP arginine N-methyl 97.7 3.6E-05 1.2E-09 71.5 5.7 73 9-82 63-143 (328)
159 3bwc_A Spermidine synthase; SA 97.7 3.5E-05 1.2E-09 71.0 5.6 76 9-85 121-211 (304)
160 2qm3_A Predicted methyltransfe 97.7 8.2E-05 2.8E-09 70.3 8.3 75 9-85 197-279 (373)
161 2esr_A Methyltransferase; stru 97.7 8.8E-06 3E-10 67.6 1.2 75 9-85 56-139 (177)
162 4dzr_A Protein-(glutamine-N5) 97.7 8.9E-06 3.1E-10 68.7 1.2 77 8-85 55-166 (215)
163 1o9g_A RRNA methyltransferase; 97.7 3.8E-05 1.3E-09 67.8 5.3 79 7-85 77-215 (250)
164 2frn_A Hypothetical protein PH 97.7 4.6E-05 1.6E-09 69.1 6.0 70 9-84 150-225 (278)
165 3tma_A Methyltransferase; thum 97.7 6.7E-05 2.3E-09 70.1 7.2 77 9-85 230-318 (354)
166 3u81_A Catechol O-methyltransf 97.7 2.5E-05 8.7E-10 67.7 3.9 74 9-84 85-170 (221)
167 2vdv_E TRNA (guanine-N(7)-)-me 97.7 5.1E-05 1.8E-09 67.0 6.0 76 9-85 75-174 (246)
168 3dr5_A Putative O-methyltransf 97.7 2.3E-05 7.8E-10 68.9 3.5 72 9-84 83-163 (221)
169 2bm8_A Cephalosporin hydroxyla 97.7 1.6E-05 5.4E-10 70.5 2.5 72 9-84 111-187 (236)
170 2pbf_A Protein-L-isoaspartate 97.7 1.9E-05 6.6E-10 68.2 3.0 71 9-86 111-195 (227)
171 3lst_A CALO1 methyltransferase 97.6 6.1E-05 2.1E-09 70.1 6.0 73 9-85 210-287 (348)
172 1o54_A SAM-dependent O-methylt 97.6 0.00013 4.3E-09 65.5 7.5 70 9-85 139-214 (277)
173 2yxl_A PH0851 protein, 450AA l 97.6 0.00018 6.3E-09 69.7 9.2 77 9-86 286-391 (450)
174 2b25_A Hypothetical protein; s 97.6 7.8E-05 2.7E-09 68.9 6.3 71 9-85 132-220 (336)
175 2nxc_A L11 mtase, ribosomal pr 97.6 3E-05 1E-09 69.3 2.8 72 9-85 144-219 (254)
176 1jg1_A PIMT;, protein-L-isoasp 97.5 5.5E-05 1.9E-09 66.2 4.2 70 9-86 116-191 (235)
177 3ntv_A MW1564 protein; rossman 97.5 6.1E-05 2.1E-09 66.1 4.2 73 8-84 96-176 (232)
178 2gpy_A O-methyltransferase; st 97.5 6.6E-05 2.3E-09 65.3 4.2 73 8-84 79-160 (233)
179 2y1w_A Histone-arginine methyl 97.5 5.6E-05 1.9E-09 70.8 3.9 74 9-84 75-155 (348)
180 3opn_A Putative hemolysin; str 97.5 0.00012 4.1E-09 65.0 5.8 112 9-124 62-181 (232)
181 3fzg_A 16S rRNA methylase; met 97.5 1.8E-05 6.2E-10 69.6 0.5 74 9-84 75-152 (200)
182 1g8a_A Fibrillarin-like PRE-rR 97.5 0.00012 4.1E-09 63.3 5.5 73 9-84 100-178 (227)
183 3c3p_A Methyltransferase; NP_9 97.4 6.9E-05 2.4E-09 64.2 3.2 71 9-84 83-160 (210)
184 3bzb_A Uncharacterized protein 97.4 0.0003 1E-08 63.7 7.5 76 9-85 104-206 (281)
185 3tr6_A O-methyltransferase; ce 97.4 0.00017 5.9E-09 62.0 5.6 73 8-84 90-174 (225)
186 1zg3_A Isoflavanone 4'-O-methy 97.4 6.5E-05 2.2E-09 70.1 3.1 70 10-85 220-294 (358)
187 1u2z_A Histone-lysine N-methyl 97.4 0.00024 8.1E-09 69.3 6.9 75 9-85 268-360 (433)
188 3ajd_A Putative methyltransfer 97.3 0.00014 4.9E-09 65.5 4.7 79 9-87 110-214 (274)
189 3adn_A Spermidine synthase; am 97.3 0.00014 4.6E-09 67.1 4.5 75 9-84 109-198 (294)
190 1xj5_A Spermidine synthase 1; 97.3 0.00035 1.2E-08 65.6 7.3 75 9-84 146-235 (334)
191 1sqg_A SUN protein, FMU protei 97.3 0.00026 8.8E-09 68.2 6.2 76 9-85 272-375 (429)
192 2b2c_A Spermidine synthase; be 97.3 0.00027 9.2E-09 65.7 5.8 75 9-84 134-222 (314)
193 3id6_C Fibrillarin-like rRNA/T 97.3 0.0003 1E-08 62.9 5.7 73 9-85 103-182 (232)
194 2h00_A Methyltransferase 10 do 97.3 3.5E-05 1.2E-09 68.0 -0.5 76 8-83 90-191 (254)
195 2frx_A Hypothetical protein YE 97.3 0.00039 1.3E-08 68.4 7.0 77 9-85 144-247 (479)
196 1uir_A Polyamine aminopropyltr 97.2 0.00013 4.6E-09 67.4 3.4 75 9-84 103-195 (314)
197 1inl_A Spermidine synthase; be 97.2 0.00043 1.5E-08 63.5 6.7 76 9-85 116-206 (296)
198 3b3j_A Histone-arginine methyl 97.2 0.00011 3.7E-09 72.3 2.6 74 9-84 183-263 (480)
199 2wa2_A Non-structural protein 97.2 4.6E-05 1.6E-09 69.7 -0.1 53 29-84 131-193 (276)
200 2oxt_A Nucleoside-2'-O-methylt 97.2 5.2E-05 1.8E-09 68.9 0.1 53 29-84 123-185 (265)
201 2plw_A Ribosomal RNA methyltra 97.2 0.00023 8E-09 59.9 4.1 42 42-84 102-154 (201)
202 2i7c_A Spermidine synthase; tr 97.2 0.00032 1.1E-08 63.9 5.2 76 9-85 104-193 (283)
203 2igt_A SAM dependent methyltra 97.2 0.00024 8.3E-09 66.4 4.4 76 9-84 177-272 (332)
204 2pt6_A Spermidine synthase; tr 97.2 0.00033 1.1E-08 65.2 5.2 75 9-84 142-230 (321)
205 3gjy_A Spermidine synthase; AP 97.2 0.00027 9.2E-09 66.2 4.5 75 9-84 115-200 (317)
206 3a27_A TYW2, uncharacterized p 97.2 0.00041 1.4E-08 62.6 5.4 71 9-85 145-220 (272)
207 2o07_A Spermidine synthase; st 97.1 0.00015 5.3E-09 66.9 2.5 75 9-84 121-209 (304)
208 3b5i_A S-adenosyl-L-methionine 97.1 0.0002 6.7E-09 68.6 3.1 46 39-85 143-226 (374)
209 4a6d_A Hydroxyindole O-methylt 97.1 0.00094 3.2E-08 62.5 7.7 70 13-85 209-284 (353)
210 3m6w_A RRNA methylase; rRNA me 97.1 0.00035 1.2E-08 68.6 4.9 77 9-85 128-230 (464)
211 3tm4_A TRNA (guanine N2-)-meth 97.1 0.001 3.4E-08 62.9 7.8 74 9-84 243-329 (373)
212 3duw_A OMT, O-methyltransferas 97.1 0.00039 1.3E-08 59.7 4.5 73 9-85 85-168 (223)
213 2hnk_A SAM-dependent O-methylt 97.1 0.0016 5.6E-08 56.8 8.3 72 9-84 87-181 (239)
214 1sui_A Caffeoyl-COA O-methyltr 97.0 0.00024 8.3E-09 63.3 2.7 72 9-84 106-190 (247)
215 1iy9_A Spermidine synthase; ro 97.0 0.00047 1.6E-08 62.6 4.4 75 9-84 101-189 (275)
216 3cbg_A O-methyltransferase; cy 97.0 0.00034 1.2E-08 61.3 3.3 72 9-84 99-182 (232)
217 1ne2_A Hypothetical protein TA 97.0 0.00094 3.2E-08 56.4 5.6 71 9-85 76-147 (200)
218 2cmg_A Spermidine synthase; tr 96.9 0.00057 1.9E-08 61.8 3.9 67 9-84 96-171 (262)
219 1nv8_A HEMK protein; class I a 96.8 0.0014 4.7E-08 59.7 5.8 75 9-85 148-250 (284)
220 3r3h_A O-methyltransferase, SA 96.8 0.00042 1.4E-08 61.5 2.1 72 9-84 87-170 (242)
221 2p41_A Type II methyltransfera 96.8 0.00024 8.1E-09 65.8 0.4 53 30-84 133-191 (305)
222 2avd_A Catechol-O-methyltransf 96.8 0.0014 4.9E-08 56.3 5.3 72 9-84 96-179 (229)
223 2b78_A Hypothetical protein SM 96.7 0.00098 3.4E-08 63.3 4.2 100 9-120 237-355 (385)
224 2efj_A 3,7-dimethylxanthine me 96.7 0.00039 1.3E-08 66.8 1.3 48 37-85 140-226 (384)
225 1mjf_A Spermidine synthase; sp 96.7 0.00069 2.4E-08 61.5 2.8 74 9-84 100-193 (281)
226 2xyq_A Putative 2'-O-methyl tr 96.7 0.00057 2E-08 63.1 2.2 54 30-85 107-172 (290)
227 3m4x_A NOL1/NOP2/SUN family pr 96.7 0.0016 5.6E-08 63.7 5.4 77 9-85 132-235 (456)
228 4azs_A Methyltransferase WBDD; 96.6 0.00028 9.6E-09 70.4 -0.6 75 8-83 89-172 (569)
229 3c3y_A Pfomt, O-methyltransfer 96.6 0.00066 2.3E-08 59.8 1.8 72 9-84 97-181 (237)
230 2f8l_A Hypothetical protein LM 96.6 0.0031 1.1E-07 58.5 6.5 77 8-85 160-257 (344)
231 1wxx_A TT1595, hypothetical pr 96.6 0.0017 5.8E-08 61.4 4.6 80 8-87 232-328 (382)
232 3c0k_A UPF0064 protein YCCW; P 96.5 0.0026 8.7E-08 60.4 5.8 79 9-87 245-342 (396)
233 3v97_A Ribosomal RNA large sub 96.5 0.00087 3E-08 68.9 2.4 78 9-86 564-659 (703)
234 2nyu_A Putative ribosomal RNA 96.5 0.0014 4.8E-08 54.8 3.0 56 30-85 72-146 (196)
235 1m6e_X S-adenosyl-L-methionnin 96.5 0.0014 4.7E-08 62.4 3.3 47 37-84 130-209 (359)
236 1zq9_A Probable dimethyladenos 96.3 0.0015 5E-08 59.5 2.5 70 9-81 52-144 (285)
237 2as0_A Hypothetical protein PH 96.3 0.0017 5.9E-08 61.5 3.0 77 9-85 242-336 (396)
238 1wy7_A Hypothetical protein PH 96.2 0.036 1.2E-06 46.5 10.3 70 9-83 74-148 (207)
239 3lcv_B Sisomicin-gentamicin re 95.9 0.028 9.5E-07 51.7 8.8 101 10-119 159-264 (281)
240 3frh_A 16S rRNA methylase; met 95.9 0.0051 1.7E-07 55.8 3.8 74 9-83 128-205 (253)
241 3lec_A NADB-rossmann superfami 95.8 0.013 4.3E-07 52.3 6.1 94 9-124 47-146 (230)
242 4dmg_A Putative uncharacterize 95.6 0.0051 1.7E-07 58.9 3.0 76 10-85 239-327 (393)
243 4hc4_A Protein arginine N-meth 95.6 0.024 8.4E-07 54.0 7.5 70 12-84 111-189 (376)
244 2yx1_A Hypothetical protein MJ 95.6 0.012 4.2E-07 54.6 5.2 68 9-84 218-291 (336)
245 3gnl_A Uncharacterized protein 95.4 0.023 7.8E-07 51.2 6.1 74 9-85 47-126 (244)
246 2okc_A Type I restriction enzy 95.3 0.016 5.5E-07 55.8 5.2 77 8-85 209-308 (445)
247 2jjq_A Uncharacterized RNA met 95.3 0.035 1.2E-06 53.6 7.4 72 9-86 314-389 (425)
248 3dou_A Ribosomal RNA large sub 95.1 0.02 7E-07 48.7 4.7 56 29-84 63-139 (191)
249 3k0b_A Predicted N6-adenine-sp 94.4 0.045 1.5E-06 52.2 5.6 76 8-85 264-351 (393)
250 3kr9_A SAM-dependent methyltra 94.4 0.07 2.4E-06 47.3 6.5 93 9-124 41-140 (225)
251 1uwv_A 23S rRNA (uracil-5-)-me 94.3 0.072 2.5E-06 51.1 6.9 74 9-87 310-392 (433)
252 3ldg_A Putative uncharacterize 94.1 0.085 2.9E-06 50.2 6.8 76 8-85 257-344 (384)
253 3evf_A RNA-directed RNA polyme 94.0 0.11 3.9E-06 47.5 7.2 56 29-84 123-184 (277)
254 3k6r_A Putative transferase PH 93.7 0.17 5.7E-06 46.2 7.7 70 9-84 150-225 (278)
255 1yub_A Ermam, rRNA methyltrans 93.6 0.00044 1.5E-08 61.1 -9.5 75 9-85 53-146 (245)
256 2zig_A TTHA0409, putative modi 93.6 0.07 2.4E-06 48.5 4.9 98 30-135 22-140 (297)
257 1boo_A Protein (N-4 cytosine-s 93.2 0.15 5.1E-06 47.1 6.6 96 30-136 15-125 (323)
258 2h1r_A Dimethyladenosine trans 93.0 0.074 2.5E-06 48.5 4.2 49 9-60 66-119 (299)
259 2qfm_A Spermine synthase; sper 93.0 0.045 1.5E-06 52.1 2.7 76 9-84 213-314 (364)
260 3ldu_A Putative methylase; str 92.9 0.12 4E-06 49.1 5.6 77 8-85 258-345 (385)
261 2b9e_A NOL1/NOP2/SUN domain fa 92.5 0.4 1.4E-05 44.0 8.5 76 9-85 129-235 (309)
262 3v97_A Ribosomal RNA large sub 92.4 0.24 8.1E-06 50.8 7.4 77 8-85 257-348 (703)
263 2ih2_A Modification methylase 91.7 0.038 1.3E-06 51.8 0.6 73 9-86 66-166 (421)
264 2ar0_A M.ecoki, type I restric 91.3 0.099 3.4E-06 51.9 3.1 78 8-85 212-313 (541)
265 1g60_A Adenine-specific methyl 90.8 0.51 1.7E-05 41.8 7.0 21 64-84 54-74 (260)
266 1qam_A ERMC' methyltransferase 89.6 0.28 9.5E-06 43.1 4.1 44 9-53 54-101 (244)
267 3o4f_A Spermidine synthase; am 89.5 1.1 3.6E-05 41.3 8.1 72 12-84 112-198 (294)
268 2dul_A N(2),N(2)-dimethylguano 88.8 0.17 5.7E-06 48.0 2.2 71 9-84 73-164 (378)
269 2vz8_A Fatty acid synthase; tr 88.6 0.076 2.6E-06 61.6 -0.4 43 41-84 1306-1348(2512)
270 3khk_A Type I restriction-modi 88.5 0.48 1.6E-05 47.1 5.4 79 7-85 283-396 (544)
271 3cvo_A Methyltransferase-like 87.9 1.4 4.7E-05 38.3 7.3 68 9-82 53-152 (202)
272 3bt7_A TRNA (uracil-5-)-methyl 87.2 0.26 9.1E-06 46.0 2.5 68 9-84 237-326 (369)
273 2qy6_A UPF0209 protein YFCK; s 87.1 0.41 1.4E-05 42.9 3.6 52 31-82 153-211 (257)
274 1eg2_A Modification methylase 86.7 0.83 2.8E-05 42.1 5.6 44 42-85 54-107 (319)
275 3lkd_A Type I restriction-modi 86.6 1.9 6.4E-05 42.8 8.4 79 7-86 248-360 (542)
276 3axs_A Probable N(2),N(2)-dime 86.0 0.56 1.9E-05 44.8 4.1 71 9-84 79-158 (392)
277 4fzv_A Putative methyltransfer 82.6 2 7E-05 40.4 6.3 76 10-85 175-285 (359)
278 2km1_A Protein DRE2; yeast, an 80.1 1.4 4.8E-05 36.2 3.6 46 37-82 50-96 (136)
279 2wk1_A NOVP; transferase, O-me 78.5 6.3 0.00021 35.8 7.9 87 30-134 191-281 (282)
280 3gru_A Dimethyladenosine trans 78.1 0.93 3.2E-05 41.5 2.2 48 9-56 74-124 (295)
281 3c6k_A Spermine synthase; sper 67.4 2.4 8.3E-05 40.4 2.3 75 10-84 231-331 (381)
282 3gcz_A Polyprotein; flavivirus 64.5 6.5 0.00022 35.9 4.5 53 31-84 141-201 (282)
283 3ll7_A Putative methyltransfer 62.1 2.2 7.6E-05 40.9 0.9 79 9-87 117-212 (410)
284 3s1s_A Restriction endonucleas 58.9 7.5 0.00026 40.8 4.2 78 9-86 350-467 (878)
285 3eld_A Methyltransferase; flav 58.6 46 0.0016 30.6 9.1 45 38-84 139-191 (300)
286 3ua3_A Protein arginine N-meth 57.8 10 0.00034 39.2 4.9 75 6-81 445-531 (745)
287 1pqw_A Polyketide synthase; ro 53.8 9.8 0.00034 31.2 3.5 64 12-84 68-137 (198)
288 4ej6_A Putative zinc-binding d 52.1 22 0.00077 32.5 6.0 68 10-85 210-285 (370)
289 4auk_A Ribosomal RNA large sub 51.4 1.3E+02 0.0044 28.3 11.2 44 29-77 253-296 (375)
290 1qyr_A KSGA, high level kasuga 51.3 6.9 0.00024 34.5 2.3 46 10-55 46-99 (252)
291 3nx4_A Putative oxidoreductase 48.7 13 0.00046 33.0 3.8 64 13-84 177-241 (324)
292 2r6z_A UPF0341 protein in RSP 46.9 6.6 0.00023 34.7 1.4 49 9-57 107-172 (258)
293 3two_A Mannitol dehydrogenase; 45.9 9.7 0.00033 34.5 2.4 63 11-85 204-266 (348)
294 4gqb_A Protein arginine N-meth 44.5 31 0.0011 34.8 6.1 68 10-81 388-464 (637)
295 1e3j_A NADP(H)-dependent ketos 42.8 36 0.0012 30.7 5.8 69 10-85 195-272 (352)
296 1f8f_A Benzyl alcohol dehydrog 41.5 28 0.00094 31.7 4.8 67 10-84 218-289 (371)
297 1m6y_A S-adenosyl-methyltransf 41.2 8 0.00027 35.2 1.0 47 9-55 52-107 (301)
298 3tqs_A Ribosomal RNA small sub 39.8 16 0.00056 32.1 2.9 44 9-53 53-103 (255)
299 3fpc_A NADP-dependent alcohol 39.0 14 0.00048 33.5 2.3 67 10-84 194-266 (352)
300 3fut_A Dimethyladenosine trans 38.9 12 0.00042 33.4 1.9 48 9-56 70-120 (271)
301 4dvj_A Putative zinc-dependent 37.9 31 0.001 31.5 4.5 68 9-85 199-271 (363)
302 1pl8_A Human sorbitol dehydrog 37.2 29 0.00099 31.4 4.2 68 10-84 199-273 (356)
303 2dph_A Formaldehyde dismutase; 37.1 23 0.00078 32.7 3.5 74 10-85 213-300 (398)
304 4gua_A Non-structural polyprot 36.9 47 0.0016 33.5 5.7 68 44-125 219-296 (670)
305 1kol_A Formaldehyde dehydrogen 35.3 24 0.00083 32.5 3.4 73 10-85 213-301 (398)
306 3jyn_A Quinone oxidoreductase; 35.3 20 0.00069 32.0 2.7 66 10-84 168-239 (325)
307 3trk_A Nonstructural polyprote 34.2 38 0.0013 31.0 4.3 68 44-125 209-286 (324)
308 1v3u_A Leukotriene B4 12- hydr 33.5 25 0.00087 31.3 3.1 65 12-84 175-244 (333)
309 3jv7_A ADH-A; dehydrogenase, n 32.9 24 0.00081 31.8 2.8 67 10-85 199-271 (345)
310 4a2c_A Galactitol-1-phosphate 31.7 59 0.002 28.9 5.3 66 12-85 190-261 (346)
311 1tt7_A YHFP; alcohol dehydroge 31.6 22 0.00074 31.8 2.3 63 14-84 182-247 (330)
312 3s2e_A Zinc-containing alcohol 31.2 28 0.00097 31.1 3.0 66 10-85 193-264 (340)
313 3r24_A NSP16, 2'-O-methyl tran 30.9 34 0.0012 31.9 3.4 41 44-84 167-217 (344)
314 1rjw_A ADH-HT, alcohol dehydro 30.6 47 0.0016 29.8 4.4 66 10-85 191-262 (339)
315 3uko_A Alcohol dehydrogenase c 30.6 45 0.0015 30.4 4.4 67 11-84 222-295 (378)
316 1xa0_A Putative NADPH dependen 30.5 24 0.00083 31.4 2.4 63 14-84 181-246 (328)
317 3uog_A Alcohol dehydrogenase; 30.3 28 0.00097 31.6 2.9 66 10-84 216-287 (363)
318 2h6e_A ADH-4, D-arabinose 1-de 29.7 19 0.00065 32.4 1.6 67 10-84 199-269 (344)
319 3qwb_A Probable quinone oxidor 29.6 43 0.0015 29.8 4.0 65 11-84 177-247 (334)
320 1jvb_A NAD(H)-dependent alcoho 29.1 18 0.00062 32.6 1.3 68 10-84 199-271 (347)
321 2d8a_A PH0655, probable L-thre 28.8 72 0.0025 28.6 5.3 63 12-84 197-267 (348)
322 3pi7_A NADH oxidoreductase; gr 28.6 30 0.001 31.2 2.7 31 46-84 233-263 (349)
323 3dmg_A Probable ribosomal RNA 28.5 1.6E+02 0.0053 27.3 7.8 58 19-85 78-140 (381)
324 1cdo_A Alcohol dehydrogenase; 28.1 45 0.0015 30.3 3.9 68 11-85 221-295 (374)
325 2fzw_A Alcohol dehydrogenase c 27.3 58 0.002 29.5 4.4 68 10-84 218-292 (373)
326 3goh_A Alcohol dehydrogenase, 27.2 14 0.00047 32.9 0.1 56 16-84 174-229 (315)
327 1p0f_A NADP-dependent alcohol 26.6 60 0.002 29.4 4.4 67 11-84 220-293 (373)
328 3gms_A Putative NADPH:quinone 26.3 21 0.00072 32.1 1.2 32 45-84 212-243 (340)
329 2oyr_A UPF0341 protein YHIQ; a 26.3 15 0.00052 32.6 0.3 68 9-78 112-194 (258)
330 4b7c_A Probable oxidoreductase 26.0 36 0.0012 30.3 2.7 66 10-84 177-248 (336)
331 3ip1_A Alcohol dehydrogenase, 25.7 86 0.0029 28.8 5.4 67 10-85 241-319 (404)
332 2jhf_A Alcohol dehydrogenase E 25.3 66 0.0023 29.2 4.4 67 11-84 220-293 (374)
333 3uzu_A Ribosomal RNA small sub 25.2 30 0.001 30.9 2.0 35 10-44 71-106 (279)
334 2c0c_A Zinc binding alcohol de 25.2 47 0.0016 30.2 3.4 66 11-85 192-262 (362)
335 2j3h_A NADP-dependent oxidored 25.0 50 0.0017 29.5 3.5 66 11-84 184-255 (345)
336 4dup_A Quinone oxidoreductase; 23.3 35 0.0012 30.9 2.1 66 10-84 195-265 (353)
337 1e3i_A Alcohol dehydrogenase, 23.0 78 0.0027 28.7 4.4 68 11-85 224-298 (376)
338 2b5w_A Glucose dehydrogenase; 22.6 43 0.0015 30.3 2.6 62 13-85 205-274 (357)
339 1uuf_A YAHK, zinc-type alcohol 22.5 17 0.00058 33.4 -0.2 64 12-85 223-289 (369)
340 2j8z_A Quinone oxidoreductase; 22.1 47 0.0016 30.0 2.7 64 12-84 192-261 (354)
341 1qor_A Quinone oxidoreductase; 21.5 53 0.0018 29.1 2.9 65 12-84 170-239 (327)
342 2hwk_A Helicase NSP2; rossman 21.0 62 0.0021 29.9 3.2 40 45-84 205-254 (320)
343 3ftd_A Dimethyladenosine trans 20.9 1.5E+02 0.005 25.6 5.6 37 9-45 56-93 (249)
344 1yb5_A Quinone oxidoreductase; 20.6 38 0.0013 30.7 1.7 62 12-84 200-269 (351)
345 1ytz_T Troponin T; muscle, THI 20.4 28 0.00095 27.2 0.6 10 246-255 1-10 (107)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.15 E-value=1.3e-11 Score=112.27 Aligned_cols=74 Identities=24% Similarity=0.347 Sum_probs=64.2
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|++|++.|+++ ..+.+.+++++.+||++++||+|+|+.++ ||.+ +..+++|+.|+|||||.|++...
T Consensus 63 ~v~gvD~s~~ml~~a~~~-~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~~-~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 63 RVHAVDPGEAQIRQALRH-PRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWFD-LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp EEEEEESCHHHHHTCCCC-TTEEEEECCTTCCCCCSSCEEEEEECSCC-TTCC-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEeCcHHhhhhhhhc-CCceeehhhhhhhcccCCcccEEEEeeeh-hHhh-HHHHHHHHHHHcCCCCEEEEEEC
Confidence 456779999999998754 35778888999999999999999999999 7764 56899999999999999998763
No 2
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.12 E-value=5.6e-11 Score=99.91 Aligned_cols=73 Identities=25% Similarity=0.229 Sum_probs=62.8
Q ss_pred CCCcHHHHHHHHHcCC-CcEEEEccCCCCCC---CCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 13 LDVHEAQVQFALERGL-PAMVGLLSTYQLPY---PSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 13 ~D~S~~mlq~A~ergv-~~~~~v~d~~~LPf---pd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.|+|++|++.|+++.. .+.+.+++.+.+++ ++++||+|+|+.+++|...+...+|+|+.|+|||||+|++..+
T Consensus 26 vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 26 VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcc
Confidence 7999999999998742 47777888888888 8999999999999955426777999999999999999999654
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.02 E-value=2.2e-10 Score=101.84 Aligned_cols=76 Identities=18% Similarity=0.275 Sum_probs=64.8
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ ++ .+.+.++|.+.+||++++||+|+|..+++| ..++..+|+|+.|+|||||+|+++
T Consensus 61 ~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~-~~d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 61 KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHH-FPNPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhHh-cCCHHHHHHHHHHHcCCCCEEEEE
Confidence 567789999999999875 44 367778899999999999999999999955 567779999999999999999997
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
.+
T Consensus 140 ~~ 141 (260)
T 1vl5_A 140 DN 141 (260)
T ss_dssp EE
T ss_pred Ec
Confidence 53
No 4
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.00 E-value=4.6e-10 Score=96.42 Aligned_cols=76 Identities=30% Similarity=0.268 Sum_probs=67.2
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++...+.+.+.+...+|+++++||+|+|..+++| ..++..+++|+.|+|||||+++++.+
T Consensus 58 ~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 58 QKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEF-VEDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp EEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTT-CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhh-cCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 56788999999999999865567777888999999999999999999955 45777999999999999999999885
No 5
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.98 E-value=4.3e-10 Score=96.03 Aligned_cols=110 Identities=10% Similarity=0.011 Sum_probs=83.0
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccc-cChHHHHHHHHhccCCCcEEEEEcCCC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT-SYDGLYLMEIDRVLRPGGYWVVSGPPI 87 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~-~d~~~~L~Ei~RVLKPGG~~vis~pp~ 87 (294)
.+.+.|+|+.|++.|+++...+.+.+++...+|+++++||+|+|..+++|+. ++...+|+++.|+|||||+++++.+..
T Consensus 65 ~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 65 QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 5677899999999999987678888889999999999999999999997765 366789999999999999999987321
Q ss_pred C-ccccCCC----cccChHHHHHHHHHHHHHHHhhceEeeecc
Q 041513 88 S-WKTSYRG----WERDAKDLQKEQISLENLATRLCWKKIAER 125 (294)
Q Consensus 88 ~-~~~~~~~----w~~~~e~l~~~~~~le~l~~~lcW~~v~~~ 125 (294)
. +...... +..+ ...+.++++..+|+.+...
T Consensus 145 ~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 145 PSLEPMYHPVATAYRWP-------LPELAQALETAGFQVTSSH 180 (203)
T ss_dssp SSCEEECCSSSCEEECC-------HHHHHHHHHHTTEEEEEEE
T ss_pred CchhhhhchhhhhccCC-------HHHHHHHHHHCCCcEEEEE
Confidence 1 1100000 1112 2346677777888877653
No 6
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.95 E-value=2.2e-10 Score=104.31 Aligned_cols=75 Identities=11% Similarity=0.009 Sum_probs=59.5
Q ss_pred eeccCCCcHHHHHHHHHc-----CCC-cEE--EEccCCCCC------CCCCcccEEEecCcCcccccChHHHHHHHHhcc
Q 041513 9 SFAPLDVHEAQVQFALER-----GLP-AMV--GLLSTYQLP------YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVL 74 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er-----gv~-~~~--~v~d~~~LP------fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVL 74 (294)
.+.+.|+|++|++.|+++ +++ +.+ ...+++.++ |++++||+|+|+.++ ||.+++..+|+|+.|+|
T Consensus 84 ~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l-~~~~d~~~~l~~~~r~L 162 (292)
T 2aot_A 84 NNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQML-YYVKDIPATLKFFHSLL 162 (292)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCG-GGCSCHHHHHHHHHHTE
T ss_pred eEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeee-eecCCHHHHHHHHHHHc
Confidence 347899999999999875 332 233 334444443 779999999999999 56678889999999999
Q ss_pred CCCcEEEEEc
Q 041513 75 RPGGYWVVSG 84 (294)
Q Consensus 75 KPGG~~vis~ 84 (294)
||||+|++..
T Consensus 163 kpgG~l~i~~ 172 (292)
T 2aot_A 163 GTNAKMLIIV 172 (292)
T ss_dssp EEEEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9999999975
No 7
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.94 E-value=3.2e-09 Score=91.50 Aligned_cols=121 Identities=17% Similarity=0.073 Sum_probs=84.3
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ ++ .+.+...+...+++++++||+|++..+++|+ .++..+++++.|+|||||+++++
T Consensus 64 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 64 KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFHEL-SEPLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGGGC-SSHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhhhc-CCHHHHHHHHHHHhCCCeEEEEE
Confidence 567789999999999875 44 4777788899999999999999999999555 57779999999999999999998
Q ss_pred cCCCCccccCCCcccChHHHHHHHHHHHHHHHhhceEeeeccc-----ceeEeeCCC
Q 041513 84 GPPISWKTSYRGWERDAKDLQKEQISLENLATRLCWKKIAERG-----PIAVWRKPT 135 (294)
Q Consensus 84 ~pp~~~~~~~~~w~~~~e~l~~~~~~le~l~~~lcW~~v~~~~-----~~~iw~Kp~ 135 (294)
................ -..+.+.++++..+|+.+.... ...+.+|+.
T Consensus 143 ~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~ 194 (219)
T 3dh0_A 143 DWKKEERDKGPPPEEV-----YSEWEVGLILEDAGIRVGRVVEVGKYCFGVYAMIVK 194 (219)
T ss_dssp EECSSCCSSSCCGGGS-----CCHHHHHHHHHHTTCEEEEEEEETTTEEEEEEECC-
T ss_pred EecccccccCCchhcc-----cCHHHHHHHHHHCCCEEEEEEeeCCceEEEEEEecc
Confidence 6311100000000000 0123466677778887765322 145677764
No 8
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.93 E-value=7.2e-10 Score=96.36 Aligned_cols=75 Identities=16% Similarity=0.067 Sum_probs=64.4
Q ss_pred eeccCCCcHHHHHHHHHcCC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHH-hccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEID-RVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~-RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++.. .+.+.+.+.+.+ +++++||+|+|..+++|+ .++..+|+|+. |+|||||+++++.+
T Consensus 66 ~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 66 DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHI-DDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGC-SSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhh-cCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 46678999999999998754 567777887777 578999999999999654 57779999999 99999999999885
No 9
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.93 E-value=4.3e-10 Score=97.54 Aligned_cols=76 Identities=7% Similarity=0.016 Sum_probs=61.7
Q ss_pred eeeccCCCcHHHHHHHHHc-----------------CCCcEEEEccCCCCCCCC-CcccEEEecCcCcccccC-hHHHHH
Q 041513 8 MSFAPLDVHEAQVQFALER-----------------GLPAMVGLLSTYQLPYPS-RSFDVAHCSRCLVPWTSY-DGLYLM 68 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er-----------------gv~~~~~v~d~~~LPfpd-~sFD~V~~s~~l~h~~~d-~~~~L~ 68 (294)
..+.+.|+|+.||+.|+++ ...+.+.++|...+|+++ ++||+|++..+++|+..+ ...+++
T Consensus 45 ~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~ 124 (203)
T 1pjz_A 45 YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQ 124 (203)
T ss_dssp CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHH
Confidence 3678889999999999876 235778889999999886 899999999999665432 235899
Q ss_pred HHHhccCCCcEEEEE
Q 041513 69 EIDRVLRPGGYWVVS 83 (294)
Q Consensus 69 Ei~RVLKPGG~~vis 83 (294)
|+.|+|||||++++.
T Consensus 125 ~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 125 HLEALMPQACSGLLI 139 (203)
T ss_dssp HHHHHSCSEEEEEEE
T ss_pred HHHHHcCCCcEEEEE
Confidence 999999999984443
No 10
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.92 E-value=1.2e-09 Score=96.42 Aligned_cols=74 Identities=20% Similarity=0.188 Sum_probs=65.2
Q ss_pred eeccCCCcHHHHHHHHHcC----CCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALERG----LPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----v~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++. ..+.+.+.+.+.+|+++++||+|+|..++ |+..++..+++++.|+|||||++++.
T Consensus 63 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 63 RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW-HLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG-GGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch-hhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 5677899999999999872 35777788899999999999999999999 55667779999999999999999997
No 11
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.92 E-value=1.6e-09 Score=92.46 Aligned_cols=78 Identities=21% Similarity=0.270 Sum_probs=67.5
Q ss_pred eeeeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEE
Q 041513 7 TMSFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 7 t~s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
...+.+.|+|+.|++.|+++ ++ .+.+.+.+...+|+++++||+|+|..+++|+ .++..+++++.|+|||||++
T Consensus 66 ~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l 144 (219)
T 3dlc_A 66 DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFW-EDVATAFREIYRILKSGGKT 144 (219)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEE
T ss_pred CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhc-cCHHHHHHHHHHhCCCCCEE
Confidence 34677889999999999886 33 4677888999999999999999999999665 67779999999999999999
Q ss_pred EEEcC
Q 041513 81 VVSGP 85 (294)
Q Consensus 81 vis~p 85 (294)
+++.+
T Consensus 145 ~~~~~ 149 (219)
T 3dlc_A 145 YIGGG 149 (219)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99863
No 12
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.92 E-value=5.3e-09 Score=90.12 Aligned_cols=75 Identities=13% Similarity=0.098 Sum_probs=64.4
Q ss_pred eeccCCCcHHHHHHHHHcCC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHH--HHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGL--YLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~--~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++.. .+.+.+++...+|++ ++||+|+|..+++|+ .++.. +|+++.|+|||||+++++.+
T Consensus 69 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 69 TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHL-TDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGS-CHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcC-ChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 56788999999999998754 566777889999998 999999999999554 45545 99999999999999999874
No 13
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.91 E-value=1.7e-09 Score=97.32 Aligned_cols=75 Identities=13% Similarity=0.175 Sum_probs=65.4
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++...+.+.+++.+.+|+ +++||+|+|..++ |+..++..+|+|+.|+|||||++++..+
T Consensus 81 ~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l-~~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 81 EVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAML-HWVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCG-GGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchh-hhCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 5677899999999999886556777789889998 6899999999999 5566788999999999999999999875
No 14
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.90 E-value=1.2e-09 Score=96.48 Aligned_cols=75 Identities=17% Similarity=0.231 Sum_probs=66.5
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++...+.+.+.|.+.++ ++++||+|+|..++ |+..++..+|+++.|+|||||+++++.+
T Consensus 59 ~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l-~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 59 VITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVF-QWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp SEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCG-GGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCch-hhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 466779999999999988666788888988888 88999999999999 5567788999999999999999999875
No 15
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.90 E-value=6.3e-09 Score=89.92 Aligned_cols=123 Identities=13% Similarity=0.064 Sum_probs=83.4
Q ss_pred eeeccCCCcHHHHHHHHHcC----C------CcEEEEccCCCCCCCCCcccEEEecCcCcccccCh--HHHHHHHHhccC
Q 041513 8 MSFAPLDVHEAQVQFALERG----L------PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD--GLYLMEIDRVLR 75 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~erg----v------~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~--~~~L~Ei~RVLK 75 (294)
..+.+.|+|+.|++.|+++. + .+.+.+.+...+++++++||+|+|..+++|+ .++ ..+++++.|+||
T Consensus 54 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~-~~~~~~~~l~~~~~~Lk 132 (219)
T 3jwg_A 54 EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHL-DENRLQAFEKVLFEFTR 132 (219)
T ss_dssp CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGC-CHHHHHHHHHHHHTTTC
T ss_pred CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHHHHHhC-CHHHHHHHHHHHHHhhC
Confidence 35678899999999998862 2 4677778888889999999999999999666 433 579999999999
Q ss_pred CCcEEEEEcCCCC---c----------cccCCCcccChHHHHHHHHHHHHHHHhhceEeeec-----------ccceeEe
Q 041513 76 PGGYWVVSGPPIS---W----------KTSYRGWERDAKDLQKEQISLENLATRLCWKKIAE-----------RGPIAVW 131 (294)
Q Consensus 76 PGG~~vis~pp~~---~----------~~~~~~w~~~~e~l~~~~~~le~l~~~lcW~~v~~-----------~~~~~iw 131 (294)
|||.++.+....+ + ..+...| +.+++ ...++++++...++.... -.++++.
T Consensus 133 pgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l---~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~ 207 (219)
T 3jwg_A 133 PQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEW--TRKEF---QTWAVKVAEKYGYSVRFLQIGEIDDEFGSPTQMGVF 207 (219)
T ss_dssp CSEEEEEEEBGGGGGCCCCT-----GGGCCTTSB--CHHHH---HHHHHHHHHHHTEEEEEEEESCCCTTSCCSEEEEEE
T ss_pred CCEEEEEccchhhhhhhcccCcccccccCceeee--cHHHH---HHHHHHHHHHCCcEEEEEecCCccccCCCCeEEEEE
Confidence 9996666532111 1 0111112 33333 334556777777766543 1127788
Q ss_pred eCCCC
Q 041513 132 RKPTN 136 (294)
Q Consensus 132 ~Kp~~ 136 (294)
+|.+.
T Consensus 208 ~~~~~ 212 (219)
T 3jwg_A 208 TLGAG 212 (219)
T ss_dssp EECC-
T ss_pred eccCC
Confidence 88765
No 16
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.89 E-value=7.7e-09 Score=85.74 Aligned_cols=72 Identities=13% Similarity=0.118 Sum_probs=63.0
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.|+++.+++.|+++...+.+...+ +++++++||+|+|..+++|+ .++..+++++.|+|||||++++..
T Consensus 41 ~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 41 KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDM-DDKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhcc-cCHHHHHHHHHHhcCCCCEEEEEE
Confidence 6778899999999999985566776666 88999999999999999655 577799999999999999999986
No 17
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.88 E-value=1.5e-09 Score=95.95 Aligned_cols=75 Identities=12% Similarity=0.041 Sum_probs=66.4
Q ss_pred eeccCCCcHHHHHHHHHcC--CCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALERG--LPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg--v~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.|+|+.|++.|+++. ..+.+.+++...+|+++++||+|+|..+++|+ .++..+|+++.|+|||||+|+++.
T Consensus 69 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 69 KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI-ASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh-hhHHHHHHHHHHHcCCCcEEEEEe
Confidence 5678899999999999874 35777888999999999999999999999554 678899999999999999999986
No 18
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.88 E-value=1.9e-09 Score=94.17 Aligned_cols=75 Identities=24% Similarity=0.211 Sum_probs=66.5
Q ss_pred eeccCCCcHHHHHHHHHcC--CCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALERG--LPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg--v~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.|+|+.|++.|+++. ..+.+.+++...+|+++++||+|+|..+++|+ .++..+++++.|+|||||+++++.
T Consensus 77 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 77 KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT-EEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc-cCHHHHHHHHHHHhCCCeEEEEEE
Confidence 5677899999999999873 45777888999999999999999999999655 677799999999999999999987
No 19
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.88 E-value=1.5e-09 Score=98.35 Aligned_cols=76 Identities=24% Similarity=0.289 Sum_probs=66.2
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|++.|+++ ++ .+.+.+++...+||++++||+|+|..+++|+. ++..+|+|+.|+|||||+|++
T Consensus 107 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 107 SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSP-DKLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcC-CHHHHHHHHHHHcCCCeEEEE
Confidence 677889999999999875 43 46777889999999999999999999996664 577999999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
+.+
T Consensus 186 ~~~ 188 (297)
T 2o57_A 186 TDP 188 (297)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 20
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.88 E-value=1.7e-09 Score=95.42 Aligned_cols=78 Identities=14% Similarity=0.213 Sum_probs=67.4
Q ss_pred eeeccCCCcHHHHHHHHHcC---CCcEEEEccCCCCCCCCCcccEEEecCcCcccc-cChHHHHHHHHhccCCCcEEEEE
Q 041513 8 MSFAPLDVHEAQVQFALERG---LPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT-SYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~erg---v~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~-~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
..+.+.|+|+.|++.|+++. ..+.+.+.|...+|+++++||+|+|..+++|+. .++..+++++.|+|||||++++.
T Consensus 79 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (266)
T 3ujc_A 79 AHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLIT 158 (266)
T ss_dssp CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEE
Confidence 36778899999999999875 356777889999999999999999999996652 56668999999999999999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
.+
T Consensus 159 ~~ 160 (266)
T 3ujc_A 159 DY 160 (266)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 21
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.86 E-value=1.8e-09 Score=98.04 Aligned_cols=74 Identities=18% Similarity=0.090 Sum_probs=60.8
Q ss_pred eeccCCCcHHHHHHHHHc----C--CCcEEEEccCCCCCCCCCcccEEEecCcCcccccCh--HHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALER----G--LPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD--GLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----g--v~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~--~~~L~Ei~RVLKPGG~~ 80 (294)
.+.+.|+|++||+.|+++ + .++.+.++|...+|++ .||+|+|.++++| ..++ ..+|+|++|+|||||+|
T Consensus 98 ~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~~l~~-~~~~~~~~~l~~i~~~LkpGG~l 174 (261)
T 4gek_A 98 KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNFTLQF-LEPSERQALLDKIYQGLNPGGAL 174 (261)
T ss_dssp EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEESCGGG-SCHHHHHHHHHHHHHHEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeeeeeee-cCchhHhHHHHHHHHHcCCCcEE
Confidence 577889999999999885 2 2567888899888885 4999999999954 4333 35899999999999999
Q ss_pred EEEcC
Q 041513 81 VVSGP 85 (294)
Q Consensus 81 vis~p 85 (294)
+++.+
T Consensus 175 ii~e~ 179 (261)
T 4gek_A 175 VLSEK 179 (261)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99874
No 22
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.86 E-value=3e-09 Score=93.84 Aligned_cols=75 Identities=16% Similarity=0.157 Sum_probs=65.7
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|++.|+++ +++ +.+.+.|...+|+++++||+|+|..+++|+ ++..+++++.|+|||||++++
T Consensus 71 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~--~~~~~l~~~~~~L~pgG~l~~ 148 (257)
T 3f4k_A 71 QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYNI--GFERGMNEWSKYLKKGGFIAV 148 (257)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCCC--CHHHHHHHHHTTEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhhc--CHHHHHHHHHHHcCCCcEEEE
Confidence 567889999999999875 443 777888999999999999999999999665 677899999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
+.+
T Consensus 149 ~~~ 151 (257)
T 3f4k_A 149 SEA 151 (257)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 23
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.85 E-value=2.2e-09 Score=94.61 Aligned_cols=76 Identities=22% Similarity=0.338 Sum_probs=65.4
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ ++ .+.+.+.+.+.+|+++++||+|+|..+++|+ .++..++.++.|+|||||++++.
T Consensus 45 ~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 45 ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHF-SDVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhhc-cCHHHHHHHHHHHcCCCcEEEEE
Confidence 566789999999999875 44 4677788899999999999999999999665 57779999999999999999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
.+
T Consensus 124 ~~ 125 (239)
T 1xxl_A 124 DH 125 (239)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 24
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.85 E-value=3.2e-09 Score=94.67 Aligned_cols=77 Identities=29% Similarity=0.415 Sum_probs=66.3
Q ss_pred eeeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 8 MSFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
..+.+.|+|+.|++.|+++ ++ .+.+..++...+|+++++||+|++..+++|+ .++..+|+++.|+|||||+++
T Consensus 85 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~ 163 (273)
T 3bus_A 85 VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHM-PDRGRALREMARVLRPGGTVA 163 (273)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTS-SCHHHHHHHHHTTEEEEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhC-CCHHHHHHHHHHHcCCCeEEE
Confidence 4677889999999999875 44 3677788899999999999999999999554 567799999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
++.+
T Consensus 164 i~~~ 167 (273)
T 3bus_A 164 IADF 167 (273)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9874
No 25
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.84 E-value=2e-09 Score=96.12 Aligned_cols=76 Identities=22% Similarity=0.351 Sum_probs=67.0
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++.... +.+.+...+|+++++||+|+|..++.|+..++..+|+|+.|+|||||+++++.+
T Consensus 78 ~v~gvD~s~~~l~~a~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 78 EVVLVDPSKEMLEVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp EEEEEESCHHHHHHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 5677899999999999886533 667888999999999999999988878877788999999999999999999875
No 26
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.84 E-value=1.1e-08 Score=89.40 Aligned_cols=108 Identities=15% Similarity=0.140 Sum_probs=77.4
Q ss_pred eeccCCCcHHHHHHHHHcCC------CcEEEEccCCCCCCCCCcccEEEecCcCccccc-ChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALERGL------PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTS-YDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv------~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~-d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+|+.|++.|+++.. .+.+.++|...++ ++++||+|+|..+++|+.. +...+++++.|+|||||+|+
T Consensus 90 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 168 (235)
T 3lcc_A 90 FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELI 168 (235)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEE
Confidence 56788999999999988632 2677778888877 5669999999999966532 55689999999999999999
Q ss_pred EEcCCCCccccCCCcccChHHHHHHHHHHHHHHHhhceEeeec
Q 041513 82 VSGPPISWKTSYRGWERDAKDLQKEQISLENLATRLCWKKIAE 124 (294)
Q Consensus 82 is~pp~~~~~~~~~w~~~~e~l~~~~~~le~l~~~lcW~~v~~ 124 (294)
+...+..-......|..+. ..+.++++..+|+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 169 TLMYPITDHVGGPPYKVDV-------STFEEVLVPIGFKAVSV 204 (235)
T ss_dssp EEECCCSCCCSCSSCCCCH-------HHHHHHHGGGTEEEEEE
T ss_pred EEEecccccCCCCCccCCH-------HHHHHHHHHcCCeEEEE
Confidence 9775332111111222232 34666777778877653
No 27
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.84 E-value=2.5e-09 Score=91.38 Aligned_cols=77 Identities=17% Similarity=0.180 Sum_probs=65.6
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCcccc-cChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT-SYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~-~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ +..+.+.+++...+|+++++||+|+|..+++|+. .+...+++++.|+|||||+++++
T Consensus 48 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 48 KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 567789999999999875 4456677788889999999999999999996663 45668999999999999999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
.+
T Consensus 128 ~~ 129 (209)
T 2p8j_A 128 FL 129 (209)
T ss_dssp EE
T ss_pred Ee
Confidence 73
No 28
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.83 E-value=2.7e-09 Score=94.11 Aligned_cols=75 Identities=17% Similarity=0.106 Sum_probs=64.2
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|++.|+++ ++ .+.+.+++...+++ +++||+|+|..+++|+ .++..+|+|+.|+|||||++++
T Consensus 61 ~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~~~-~~~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 61 TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGATWIA-GGFAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESCGGGT-SSSHHHHHHHTTSEEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCChHhc-CCHHHHHHHHHHHcCCCeEEEE
Confidence 567789999999999875 44 37778889999998 8999999999999554 4667999999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
+.+
T Consensus 139 ~~~ 141 (256)
T 1nkv_A 139 GEP 141 (256)
T ss_dssp EEE
T ss_pred ecC
Confidence 874
No 29
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.81 E-value=5.1e-09 Score=93.48 Aligned_cols=75 Identities=21% Similarity=0.200 Sum_probs=65.8
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|++.|+++ +++ +.+.+.|...+|+++++||+|+|..+++|+ ++..+++++.|+|||||++++
T Consensus 71 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 71 QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNI--GFERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGGT--CHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCceec--CHHHHHHHHHHHcCCCCEEEE
Confidence 567789999999999875 442 778888999999999999999999999666 677999999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
+.+
T Consensus 149 ~~~ 151 (267)
T 3kkz_A 149 SEC 151 (267)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 30
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.81 E-value=3.9e-09 Score=96.06 Aligned_cols=75 Identities=12% Similarity=0.063 Sum_probs=65.0
Q ss_pred eeeccCCCcHHHHHHHHHc-------CCCcEEEEccCCCCCCCC------CcccEEEecCcCcccccChHHHHHHHHhcc
Q 041513 8 MSFAPLDVHEAQVQFALER-------GLPAMVGLLSTYQLPYPS------RSFDVAHCSRCLVPWTSYDGLYLMEIDRVL 74 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er-------gv~~~~~v~d~~~LPfpd------~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVL 74 (294)
..+.+.|+|+.|++.|+++ ...+.+.+++.+.+++++ ++||+|+|..+++|+ ++..+++++.|+|
T Consensus 62 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~--~~~~~l~~~~~~L 139 (299)
T 3g5t_A 62 EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWF--DFEKFQRSAYANL 139 (299)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS--CHHHHHHHHHHHE
T ss_pred CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHh--CHHHHHHHHHHhc
Confidence 3567789999999999886 346778889999999988 899999999999555 8889999999999
Q ss_pred CCCcEEEEEc
Q 041513 75 RPGGYWVVSG 84 (294)
Q Consensus 75 KPGG~~vis~ 84 (294)
||||+|++..
T Consensus 140 kpgG~l~i~~ 149 (299)
T 3g5t_A 140 RKDGTIAIWG 149 (299)
T ss_dssp EEEEEEEEEE
T ss_pred CCCcEEEEEe
Confidence 9999999843
No 31
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.80 E-value=2.9e-09 Score=93.59 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=65.3
Q ss_pred eeccCCCcHHHHHHHHHcCC---CcEEEEccCCCCCCCCCcccEEEecCcCcccc-cChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALERGL---PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT-SYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv---~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~-~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.|+|+.|++.|+++.. .+.+.+.+...+++++++||+|+|..+++|+. .+...+|+++.|+|||||+|+++.
T Consensus 118 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 118 TTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 46678999999999998752 46677788888999999999999999997664 345689999999999999999987
Q ss_pred C
Q 041513 85 P 85 (294)
Q Consensus 85 p 85 (294)
+
T Consensus 198 ~ 198 (254)
T 1xtp_A 198 N 198 (254)
T ss_dssp E
T ss_pred c
Confidence 4
No 32
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.80 E-value=4.8e-09 Score=99.69 Aligned_cols=75 Identities=23% Similarity=0.194 Sum_probs=65.6
Q ss_pred eeccCCCcHHHHHHHHHc---------C----CCcEEEEccCCCC------CCCCCcccEEEecCcCcccccChHHHHHH
Q 041513 9 SFAPLDVHEAQVQFALER---------G----LPAMVGLLSTYQL------PYPSRSFDVAHCSRCLVPWTSYDGLYLME 69 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er---------g----v~~~~~v~d~~~L------Pfpd~sFD~V~~s~~l~h~~~d~~~~L~E 69 (294)
.+.+.|+|+.|++.|+++ | ..+.+.+.+...+ |+++++||+|++..++ |+..++..+|+|
T Consensus 110 ~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l-~~~~d~~~~l~~ 188 (383)
T 4fsd_A 110 KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVC-NLSTNKLALFKE 188 (383)
T ss_dssp EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCG-GGCSCHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccch-hcCCCHHHHHHH
Confidence 567889999999999986 4 3677888888887 9999999999999999 455678899999
Q ss_pred HHhccCCCcEEEEEc
Q 041513 70 IDRVLRPGGYWVVSG 84 (294)
Q Consensus 70 i~RVLKPGG~~vis~ 84 (294)
+.|+|||||+|+++.
T Consensus 189 ~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 189 IHRVLRDGGELYFSD 203 (383)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHcCCCCEEEEEE
Confidence 999999999999986
No 33
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.78 E-value=5.5e-09 Score=91.05 Aligned_cols=76 Identities=25% Similarity=0.226 Sum_probs=65.6
Q ss_pred eeccCCCcHHHHHHHHHcCC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++.. .+.+.+.+...+++++++||+|+|..+++|+ .++..+|+++.|+|||||+++++.+
T Consensus 68 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 68 YVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYV-EDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccccc-chHHHHHHHHHHhcCcCcEEEEEeC
Confidence 56778999999999998753 4667778888899999999999999999554 5777999999999999999999873
No 34
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.78 E-value=3.5e-09 Score=93.13 Aligned_cols=74 Identities=15% Similarity=0.127 Sum_probs=62.0
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCC--CCCCCcccEEEecCcCccccc-ChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQL--PYPSRSFDVAHCSRCLVPWTS-YDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~L--Pfpd~sFD~V~~s~~l~h~~~-d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++ +.+...+...+ |+++++||+|+|..+++|+.+ +...+++++.|+|||||++++..+
T Consensus 65 ~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 65 ESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp CEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred cEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 467789999999999987 56666776654 899999999999999966643 226899999999999999999875
No 35
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.77 E-value=3.2e-08 Score=90.51 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=62.6
Q ss_pred eeeccCCCcHHHHHHHHHcC----CC--cEEEEccCCCCCCCCCcccEEEecCcCcccccChHH---HHHHHHhccCCCc
Q 041513 8 MSFAPLDVHEAQVQFALERG----LP--AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGL---YLMEIDRVLRPGG 78 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~erg----v~--~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~---~L~Ei~RVLKPGG 78 (294)
..+.+.|+|+.|++.|+++. +. +.+.++|...+|++ ++||+|+|..+++|+. ++.. +++++.|+|||||
T Consensus 144 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG 221 (305)
T 3ocj_A 144 VQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLNIYEP-DDARVTELYRRFWQALKPGG 221 (305)
T ss_dssp CEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSGGGCC-CHHHHHHHHHHHHHHEEEEE
T ss_pred CeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChhhhcC-CHHHHHHHHHHHHHhcCCCe
Confidence 35677899999999998763 32 67788899999998 9999999999996654 4433 7999999999999
Q ss_pred EEEEEc
Q 041513 79 YWVVSG 84 (294)
Q Consensus 79 ~~vis~ 84 (294)
+|+++.
T Consensus 222 ~l~i~~ 227 (305)
T 3ocj_A 222 ALVTSF 227 (305)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999987
No 36
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.77 E-value=7.4e-09 Score=93.53 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=62.0
Q ss_pred eeccCCCcHHHHHHHHHcC----------------------CCcEEEEccCCCCCCCC-CcccEEEecCcCcccccC-hH
Q 041513 9 SFAPLDVHEAQVQFALERG----------------------LPAMVGLLSTYQLPYPS-RSFDVAHCSRCLVPWTSY-DG 64 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----------------------v~~~~~v~d~~~LPfpd-~sFD~V~~s~~l~h~~~d-~~ 64 (294)
.+.+.|+|+.||+.|+++. ..+.+.++|...+++++ ++||+|++..+++|.... ..
T Consensus 92 ~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~ 171 (252)
T 2gb4_A 92 TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHD 171 (252)
T ss_dssp EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHH
T ss_pred eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHH
Confidence 6788999999999997642 35678889999999875 899999999999666433 34
Q ss_pred HHHHHHHhccCCCcEEEEE
Q 041513 65 LYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 65 ~~L~Ei~RVLKPGG~~vis 83 (294)
.+++++.|+|||||+|++.
T Consensus 172 ~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 172 RYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp HHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEE
Confidence 6999999999999999754
No 37
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.77 E-value=4.8e-09 Score=93.80 Aligned_cols=74 Identities=16% Similarity=0.034 Sum_probs=65.0
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++. .+.+.+.+.+.+|+++++||+|+|..+++|+ .++..+++|+.|+|| ||++++..+
T Consensus 58 ~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 58 FVYAVEPSIVMRQQAVVHP-QVEWFTGYAENLALPDKSVDGVISILAIHHF-SHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp EEEEECSCHHHHHSSCCCT-TEEEECCCTTSCCSCTTCBSEEEEESCGGGC-SSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred EEEEEeCCHHHHHHHHhcc-CCEEEECchhhCCCCCCCEeEEEEcchHhhc-cCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 5678899999999998766 7788888999999999999999999999665 678899999999999 998888763
No 38
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.75 E-value=7.2e-09 Score=88.69 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=64.1
Q ss_pred eeccCCCcHHHHHHHHHcCC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccC-hHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY-DGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d-~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|++.+. .+.+...|...+ +++++||+|+|..+++|+.+. ...+|+++.|+|||||+++++.+
T Consensus 70 ~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 70 RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 56778999999999999774 567777888888 889999999999999665432 25899999999999999999863
No 39
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.75 E-value=4.2e-09 Score=97.57 Aligned_cols=77 Identities=8% Similarity=-0.031 Sum_probs=58.8
Q ss_pred eeccCCCcHHHHHHHHHcC----CC-------cEEEEccC------CCC--CCCCCcccEEEecCcCcccc--cChHHHH
Q 041513 9 SFAPLDVHEAQVQFALERG----LP-------AMVGLLST------YQL--PYPSRSFDVAHCSRCLVPWT--SYDGLYL 67 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----v~-------~~~~v~d~------~~L--Pfpd~sFD~V~~s~~l~h~~--~d~~~~L 67 (294)
.+.+.|+|+.||+.|+++. .. +.+.+.+. +.| ++++++||+|+|.+++++.. .+...+|
T Consensus 73 ~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l 152 (302)
T 2vdw_A 73 LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVM 152 (302)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHH
Confidence 5778899999999998862 21 34555554 333 47789999999999994321 3446899
Q ss_pred HHHHhccCCCcEEEEEcC
Q 041513 68 MEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 68 ~Ei~RVLKPGG~~vis~p 85 (294)
+++.|+|||||+|+++.+
T Consensus 153 ~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 153 NNLSELTASGGKVLITTM 170 (302)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEEeC
Confidence 999999999999999886
No 40
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.73 E-value=5.8e-09 Score=94.02 Aligned_cols=76 Identities=16% Similarity=0.069 Sum_probs=65.0
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCC-CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLP-YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LP-fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+|+.|++.|+++ ++ .+.+.+++...++ +++++||+|+|..+++| ..++..+++++.|+|||||+++
T Consensus 92 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~ 170 (285)
T 4htf_A 92 QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEW-VADPRSVLQTLWSVLRPGGVLS 170 (285)
T ss_dssp EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGG-CSCHHHHHHHHHHTEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhc-ccCHHHHHHHHHHHcCCCeEEE
Confidence 567889999999999875 33 3667778888887 88999999999999955 4677799999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+..+
T Consensus 171 ~~~~ 174 (285)
T 4htf_A 171 LMFY 174 (285)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9874
No 41
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.73 E-value=1.1e-08 Score=88.89 Aligned_cols=72 Identities=25% Similarity=0.259 Sum_probs=63.2
Q ss_pred ccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 11 APLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 11 ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.|+|+.|++.|+++ .+.+...+...+|+++++||+|+|..+++| ..++..+|+++.|+|||||+++++.+
T Consensus 69 ~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 69 IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICF-VDDPERALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGG-SSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhh-ccCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 5679999999999998 456677888889999999999999999955 46777999999999999999999874
No 42
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.73 E-value=1.2e-08 Score=93.72 Aligned_cols=76 Identities=14% Similarity=0.154 Sum_probs=65.8
Q ss_pred eeeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 8 MSFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
..+.+.|+|+.|++.|+++ ++ .+.+.++|...+|+++++||+|+|..+++|+ +...+|+++.|+|||||+++
T Consensus 141 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~ 218 (312)
T 3vc1_A 141 SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYV--DLHDLFSEHSRFLKVGGRYV 218 (312)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhC--CHHHHHHHHHHHcCCCcEEE
Confidence 3567789999999999875 44 3778888999999999999999999999665 47799999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+..+
T Consensus 219 ~~~~ 222 (312)
T 3vc1_A 219 TITG 222 (312)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9873
No 43
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.73 E-value=2.5e-08 Score=86.19 Aligned_cols=75 Identities=15% Similarity=0.063 Sum_probs=62.1
Q ss_pred eeccCCCcHHHHHHHHHcC----C------CcEEEEccCCCCCCCCCcccEEEecCcCcccccCh--HHHHHHHHhccCC
Q 041513 9 SFAPLDVHEAQVQFALERG----L------PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD--GLYLMEIDRVLRP 76 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----v------~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~--~~~L~Ei~RVLKP 76 (294)
.+.+.|+|+.|++.|+++- + .+.+.+++...+++++++||+|+|..+++|+ .++ ..+++++.|+|||
T Consensus 55 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~Lkp 133 (217)
T 3jwh_A 55 QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHL-DLSRLGAFERVLFEFAQP 133 (217)
T ss_dssp EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCC
T ss_pred EEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeHHHHHcC-CHHHHHHHHHHHHHHcCC
Confidence 5677899999999998862 2 4677778888888888999999999999666 444 5899999999999
Q ss_pred CcEEEEEc
Q 041513 77 GGYWVVSG 84 (294)
Q Consensus 77 GG~~vis~ 84 (294)
||.++++.
T Consensus 134 gG~li~~~ 141 (217)
T 3jwh_A 134 KIVIVTTP 141 (217)
T ss_dssp SEEEEEEE
T ss_pred CEEEEEcc
Confidence 99777754
No 44
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.72 E-value=1.1e-08 Score=89.11 Aligned_cols=76 Identities=11% Similarity=0.127 Sum_probs=63.9
Q ss_pred eeeccCCCcHHHHHHHHHcCC---CcEEEEccCCCCCCCCCcccEEEecCcCcccccChH--HHHHHHHhccCCCcEEEE
Q 041513 8 MSFAPLDVHEAQVQFALERGL---PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDG--LYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~ergv---~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~--~~L~Ei~RVLKPGG~~vi 82 (294)
..+.+.|+|+.|++.|+++.. .+.+.+.|...++++ ++||+|+|..+++|+ .++. .+++++.|+|||||++++
T Consensus 69 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 69 ATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIHHL-EDEDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp CEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCccccC-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 356788999999999998732 567778899999988 999999999999665 4443 499999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
+.+
T Consensus 147 ~~~ 149 (234)
T 3dtn_A 147 ADL 149 (234)
T ss_dssp EEE
T ss_pred EEe
Confidence 873
No 45
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.72 E-value=1.4e-08 Score=87.29 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=63.2
Q ss_pred eeccCCCcHHHHHHHHHcCC---CcEEEEccCCCCCCCCCcccEEEecCcCcccccCh---HHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALERGL---PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD---GLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv---~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~---~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|++.|+++.. .+.+.+.+...++ ++++||+|+|..+++|+ .++ ..++.++.|+|||||+|++
T Consensus 75 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 75 RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYL-EDMTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGS-SSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhC-CCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 67788999999999998742 4677788888888 78999999999999555 444 4679999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
+.+
T Consensus 153 ~~~ 155 (216)
T 3ofk_A 153 GSA 155 (216)
T ss_dssp EEE
T ss_pred Eec
Confidence 874
No 46
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.72 E-value=6.1e-08 Score=80.88 Aligned_cols=77 Identities=14% Similarity=0.020 Sum_probs=64.1
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEec-CcCcccc-cChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCS-RCLVPWT-SYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s-~~l~h~~-~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.+++.|+++...+.+...+...+++++++||+|++. .+++|.. ++...++.++.|+|||||++++..+
T Consensus 70 ~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 70 DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 567789999999999998666778888888889999999999998 5664432 2335799999999999999999875
No 47
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.71 E-value=1.3e-08 Score=90.95 Aligned_cols=76 Identities=22% Similarity=0.323 Sum_probs=65.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ ++ .+.+...|...+|+++++||+|++..+++| ..++..+++++.|+|||||++++.
T Consensus 63 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 63 EITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEH-LQSPEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhh-cCCHHHHHHHHHHHcCCCcEEEEE
Confidence 567789999999999875 44 467777889999999999999999999955 567779999999999999999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
.+
T Consensus 142 ~~ 143 (276)
T 3mgg_A 142 EG 143 (276)
T ss_dssp EE
T ss_pred Ec
Confidence 74
No 48
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.71 E-value=1.7e-08 Score=87.12 Aligned_cols=76 Identities=24% Similarity=0.316 Sum_probs=64.3
Q ss_pred eeccCCCcHHHHHHHHHcC----C------CcEEEEccCCCCCCCCCcccEEEecCcCcccccChH---HHHHHHHhccC
Q 041513 9 SFAPLDVHEAQVQFALERG----L------PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDG---LYLMEIDRVLR 75 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----v------~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~---~~L~Ei~RVLK 75 (294)
.+.+.|+|+.|++.|+++. + .+.+.+.+...+++++++||+|+|..+++|+ .++. .+++++.|+||
T Consensus 54 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~-~~~~~~~~~l~~~~~~L~ 132 (235)
T 3sm3_A 54 SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSV-PDPKERSRIIKEVFRVLK 132 (235)
T ss_dssp EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGC-CCHHHHHHHHHHHHHHEE
T ss_pred eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcchhhcC-CCHHHHHHHHHHHHHHcC
Confidence 5678899999999999853 2 2466778899999999999999999999554 5555 79999999999
Q ss_pred CCcEEEEEcC
Q 041513 76 PGGYWVVSGP 85 (294)
Q Consensus 76 PGG~~vis~p 85 (294)
|||+++++.+
T Consensus 133 pgG~l~~~~~ 142 (235)
T 3sm3_A 133 PGAYLYLVEF 142 (235)
T ss_dssp EEEEEEEEEE
T ss_pred CCeEEEEEEC
Confidence 9999999874
No 49
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.71 E-value=1.2e-08 Score=90.77 Aligned_cols=75 Identities=16% Similarity=0.165 Sum_probs=64.4
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecC-cCcccc--cChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSR-CLVPWT--SYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~-~l~h~~--~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.|+|+.|++.|+++...+.+.++|...+++ +++||+|+|.. +++|+. .+...+|+++.|+|||||+|++..
T Consensus 74 ~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 74 TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4677899999999999986677888889999988 78999999998 886653 345579999999999999999974
No 50
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.70 E-value=7.2e-09 Score=93.87 Aligned_cols=76 Identities=22% Similarity=0.138 Sum_probs=57.9
Q ss_pred eeccCCCcHHHHHHHHHcCCC-----------------------------------cEEEEccCCC-CCC-----CCCcc
Q 041513 9 SFAPLDVHEAQVQFALERGLP-----------------------------------AMVGLLSTYQ-LPY-----PSRSF 47 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~-----------------------------------~~~~v~d~~~-LPf-----pd~sF 47 (294)
.+.+.|+|+.|++.|+++.-. ..+..+|... +|| ++++|
T Consensus 96 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~f 175 (289)
T 2g72_A 96 DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPA 175 (289)
T ss_dssp EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSE
T ss_pred eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCC
Confidence 577889999999999873100 2344457666 664 45679
Q ss_pred cEEEecCcCccc---ccChHHHHHHHHhccCCCcEEEEEc
Q 041513 48 DVAHCSRCLVPW---TSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 48 D~V~~s~~l~h~---~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
|+|+|+.+++|. .++...+|+|+.|+|||||+|+++.
T Consensus 176 D~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 176 DALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999999553 3356789999999999999999975
No 51
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.69 E-value=1e-08 Score=90.19 Aligned_cols=76 Identities=17% Similarity=0.069 Sum_probs=63.6
Q ss_pred eeccCCCcHHHHHHHHHcCC-----CcEEEEccCCCCCCCCCcccEEEecCcCcccccChH--HHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALERGL-----PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDG--LYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv-----~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~--~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+|+.|++.|+++.. .+.+...+...+++++++||+|+|..+++|+. ++. .+++++.|+|||||+|+
T Consensus 104 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~ 182 (241)
T 2ex4_A 104 EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLT-DQHLAEFLRRCKGSLRPNGIIV 182 (241)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCC-HHHHHHHHHHHHHhcCCCeEEE
Confidence 56778999999999998642 25667788889999999999999999996654 433 79999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
++.+
T Consensus 183 i~~~ 186 (241)
T 2ex4_A 183 IKDN 186 (241)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9764
No 52
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.66 E-value=2.2e-08 Score=90.63 Aligned_cols=77 Identities=16% Similarity=0.186 Sum_probs=65.1
Q ss_pred eeeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 8 MSFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
..+.+.|+|+.|++.|+++ +..+.+.+.|...+|++ ++||+|+|..+++| ..++..+++++.|+|||||++++.
T Consensus 48 ~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 48 SKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFLLH-MTTPETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp CEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCGGG-CSSHHHHHHHHHHTEEEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChhhc-CCCHHHHHHHHHHHcCCCCEEEEE
Confidence 3567789999999999875 23567778888899985 69999999999954 567779999999999999999998
Q ss_pred cCC
Q 041513 84 GPP 86 (294)
Q Consensus 84 ~pp 86 (294)
.+.
T Consensus 126 ~~~ 128 (284)
T 3gu3_A 126 EPH 128 (284)
T ss_dssp ECC
T ss_pred ecc
Confidence 864
No 53
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.66 E-value=8.5e-09 Score=92.96 Aligned_cols=77 Identities=21% Similarity=0.327 Sum_probs=63.4
Q ss_pred eeccCCCcHHHHHHHHHcC---------CCcEEEEccCCCCC---CCCCcccEEEec-CcCccccc------ChHHHHHH
Q 041513 9 SFAPLDVHEAQVQFALERG---------LPAMVGLLSTYQLP---YPSRSFDVAHCS-RCLVPWTS------YDGLYLME 69 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---------v~~~~~v~d~~~LP---fpd~sFD~V~~s-~~l~h~~~------d~~~~L~E 69 (294)
.+.+.|+|+.|++.|+++. ..+.+..++...+| +++++||+|+|. .+++|+.+ +...++++
T Consensus 81 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~ 160 (293)
T 3thr_A 81 SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKN 160 (293)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHH
Confidence 6778899999999998742 24556677888888 899999999998 88866543 16689999
Q ss_pred HHhccCCCcEEEEEcC
Q 041513 70 IDRVLRPGGYWVVSGP 85 (294)
Q Consensus 70 i~RVLKPGG~~vis~p 85 (294)
+.|+|||||+|+++.+
T Consensus 161 ~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 161 IASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHHTEEEEEEEEEEEE
T ss_pred HHHHcCCCeEEEEEeC
Confidence 9999999999999875
No 54
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.66 E-value=9.3e-09 Score=88.36 Aligned_cols=76 Identities=22% Similarity=0.163 Sum_probs=62.4
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccc-cChHHHHHHHHhccCCCcEEEEEcCC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT-SYDGLYLMEIDRVLRPGGYWVVSGPP 86 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~-~d~~~~L~Ei~RVLKPGG~~vis~pp 86 (294)
.+.+.|+|+.|++.|+++. .+.+...+...++ ++++||+|+|..+++|+. ++...+|+++.|+|||||+|+++.++
T Consensus 67 ~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 67 DVDATDGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp EEEEEESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 5677899999999999873 3344557788888 899999999999996654 24558999999999999999998743
No 55
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.65 E-value=3.9e-08 Score=83.68 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=62.6
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCcccc-cChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT-SYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~-~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ +..+.+.+.+...+++++++||+|+|+.+ |+. .+...+++++.|+|||||+++++
T Consensus 53 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~--~~~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 53 EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC--HLPSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC--CCCHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh--cCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 577789999999999876 45677777888889999999999999643 543 34567999999999999999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
.+
T Consensus 131 ~~ 132 (202)
T 2kw5_A 131 GF 132 (202)
T ss_dssp EE
T ss_pred Ee
Confidence 73
No 56
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.64 E-value=2.4e-08 Score=85.78 Aligned_cols=76 Identities=16% Similarity=0.138 Sum_probs=63.4
Q ss_pred eeeccCCCcHHHHHHHHHcCCCcEEEEccCCC--CCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 8 MSFAPLDVHEAQVQFALERGLPAMVGLLSTYQ--LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~--LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
..+.+.|+|+.|++.|+++.. .+...+... +++++++||+|+|..+++|+ .++..++.++.|+|||||+++++.+
T Consensus 55 ~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 55 TRVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVLEHL-FDPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp CEEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCGGGS-SCHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred CeEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChhhhc-CCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 356778999999999988753 455667655 78889999999999999554 5677999999999999999999885
Q ss_pred C
Q 041513 86 P 86 (294)
Q Consensus 86 p 86 (294)
.
T Consensus 132 ~ 132 (230)
T 3cc8_A 132 N 132 (230)
T ss_dssp C
T ss_pred C
Confidence 3
No 57
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.62 E-value=1.8e-08 Score=85.84 Aligned_cols=77 Identities=23% Similarity=0.237 Sum_probs=64.3
Q ss_pred eeccCCCcHHHHHHHHHcC---CCcEEEEccCCCCCCCCCcccEEEecCcCcccc--------------cChHHHHHHHH
Q 041513 9 SFAPLDVHEAQVQFALERG---LPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT--------------SYDGLYLMEID 71 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---v~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~--------------~d~~~~L~Ei~ 71 (294)
.+...|+|+.|++.|+++. ..+.+.+.+...+++++++||+|++..++.|.. .+...+++++.
T Consensus 67 ~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 146 (215)
T 2pxx_A 67 NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVS 146 (215)
T ss_dssp CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHH
T ss_pred cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHH
Confidence 5677899999999999874 246777888888999999999999988885443 23457999999
Q ss_pred hccCCCcEEEEEcC
Q 041513 72 RVLRPGGYWVVSGP 85 (294)
Q Consensus 72 RVLKPGG~~vis~p 85 (294)
|+|||||++++..+
T Consensus 147 ~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 147 RVLVPGGRFISMTS 160 (215)
T ss_dssp HHEEEEEEEEEEES
T ss_pred HhCcCCCEEEEEeC
Confidence 99999999999885
No 58
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.62 E-value=1.7e-08 Score=86.50 Aligned_cols=74 Identities=24% Similarity=0.209 Sum_probs=59.6
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCC---CCCCC-cccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQL---PYPSR-SFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~L---Pfpd~-sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.|+|+.|++.|++++ ...+...+...+ +++.+ +||+|+|..++ | ..++..+++++.|+|||||+|+++.
T Consensus 76 ~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l-~-~~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 76 EAVGVDGDRTLVDAARAAG-AGEVHLASYAQLAEAKVPVGKDYDLICANFAL-L-HQDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp EEEEEESCHHHHHHHHHTC-SSCEEECCHHHHHTTCSCCCCCEEEEEEESCC-C-SSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEEcCCHHHHHHHHHhc-ccccchhhHHhhcccccccCCCccEEEECchh-h-hhhHHHHHHHHHHHhCCCeEEEEEe
Confidence 5678899999999999983 344555554444 65555 49999999999 5 6677799999999999999999987
Q ss_pred C
Q 041513 85 P 85 (294)
Q Consensus 85 p 85 (294)
+
T Consensus 153 ~ 153 (227)
T 3e8s_A 153 L 153 (227)
T ss_dssp C
T ss_pred c
Confidence 4
No 59
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.62 E-value=2.6e-08 Score=86.51 Aligned_cols=76 Identities=17% Similarity=0.231 Sum_probs=63.9
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecC-cCcccc--cChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSR-CLVPWT--SYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~-~l~h~~--~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+|+.|++.|+++ +..+.+.+.+...++++ ++||+|+|.. +++|+. .+...+|+++.|+|||||+++
T Consensus 61 ~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~ 139 (246)
T 1y8c_A 61 NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFI 139 (246)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 567789999999999875 33677777888888887 8999999998 996653 455689999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+..+
T Consensus 140 ~~~~ 143 (246)
T 1y8c_A 140 FDIN 143 (246)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9764
No 60
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.61 E-value=8.6e-09 Score=92.62 Aligned_cols=76 Identities=13% Similarity=-0.012 Sum_probs=58.1
Q ss_pred eeccCCCcHHHHHHHHHcC------CC----------------------------c-EEEEccCCC-CCCC---CCcccE
Q 041513 9 SFAPLDVHEAQVQFALERG------LP----------------------------A-MVGLLSTYQ-LPYP---SRSFDV 49 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg------v~----------------------------~-~~~v~d~~~-LPfp---d~sFD~ 49 (294)
++.+.|+|+.||+.|+++. +. + .+.++|... .|++ +++||+
T Consensus 80 ~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~ 159 (263)
T 2a14_A 80 DITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADC 159 (263)
T ss_dssp EEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEE
T ss_pred ceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCE
Confidence 5788899999999998631 11 1 155677555 4553 679999
Q ss_pred EEecCcCccccc---ChHHHHHHHHhccCCCcEEEEEc
Q 041513 50 AHCSRCLVPWTS---YDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 50 V~~s~~l~h~~~---d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
|+|+++++|... +...+++++.|+|||||+|+++.
T Consensus 160 V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 160 VLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp EEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred eeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 999999966433 34579999999999999999996
No 61
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.61 E-value=3.6e-08 Score=85.60 Aligned_cols=76 Identities=20% Similarity=0.119 Sum_probs=62.6
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecC-cCcccc--cChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSR-CLVPWT--SYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~-~l~h~~--~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++...+.+...+...+++ +++||+|+|+. +++|.. .+...+|+++.|+|||||+++++.+
T Consensus 64 ~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 64 DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4667899999999999986567788888888888 78999999766 775543 3345799999999999999999863
No 62
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.61 E-value=4.6e-08 Score=82.43 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=62.5
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCccccc-ChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTS-YDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~-d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|++.|+++ ++ .+.+...+...+++ +++||+|++..+++|+.. +...+++++.|+|||||++++
T Consensus 56 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 56 DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 567789999999999874 44 56777788888888 899999999999966542 556899999999999999888
Q ss_pred Ec
Q 041513 83 SG 84 (294)
Q Consensus 83 s~ 84 (294)
..
T Consensus 135 ~~ 136 (199)
T 2xvm_A 135 VA 136 (199)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 63
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.60 E-value=2.4e-08 Score=86.12 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=63.9
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCccc-ccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPW-TSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~-~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ +..+.+.+.|...+++++++||+|+|..+++++ ..+...+++++.|+|||||++++.
T Consensus 62 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 62 EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 567789999999999875 356778888988899999999999999984322 345568999999999999999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
.+
T Consensus 142 ~~ 143 (227)
T 1ve3_A 142 FT 143 (227)
T ss_dssp EE
T ss_pred ec
Confidence 75
No 64
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.60 E-value=7.6e-08 Score=86.59 Aligned_cols=74 Identities=12% Similarity=0.062 Sum_probs=61.8
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccc-cChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT-SYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~-~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+|+.|++.|+++ ++ .+.+...+...+| ++||+|+|..+++|+. .+...+++++.|+|||||+++
T Consensus 89 ~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 165 (287)
T 1kpg_A 89 NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVML 165 (287)
T ss_dssp EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEE
Confidence 567789999999999886 33 4666777877665 8999999999997765 466789999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+..+
T Consensus 166 ~~~~ 169 (287)
T 1kpg_A 166 LHTI 169 (287)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9874
No 65
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.59 E-value=2e-08 Score=90.14 Aligned_cols=77 Identities=22% Similarity=0.319 Sum_probs=63.7
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCC-CCCcccEEEecCcCccc---ccChHHHHHHHHhccCCCc
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPY-PSRSFDVAHCSRCLVPW---TSYDGLYLMEIDRVLRPGG 78 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPf-pd~sFD~V~~s~~l~h~---~~d~~~~L~Ei~RVLKPGG 78 (294)
.+.+.|+|+.|++.|+++ +. .+.+.+++...+|+ ++++||+|+|..+++|. ..+...+|+++.|+|||||
T Consensus 89 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG 168 (298)
T 1ri5_A 89 EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGG 168 (298)
T ss_dssp EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCC
Confidence 567789999999999876 22 35677788888898 68999999999999542 3445679999999999999
Q ss_pred EEEEEcC
Q 041513 79 YWVVSGP 85 (294)
Q Consensus 79 ~~vis~p 85 (294)
+++++.+
T Consensus 169 ~l~~~~~ 175 (298)
T 1ri5_A 169 YFIMTVP 175 (298)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 9999885
No 66
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.56 E-value=6.3e-09 Score=99.26 Aligned_cols=76 Identities=17% Similarity=0.218 Sum_probs=63.9
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEE---EEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMV---GLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~---~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|++++++... ...+.+.+|+++++||+|+|..+++|+ .++..+|+++.|+|||||+|++..+
T Consensus 131 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 131 RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHI-PYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGC-TTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhc-CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 567889999999999999765432 123466788999999999999999665 5788999999999999999999865
No 67
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.54 E-value=2.9e-08 Score=91.02 Aligned_cols=76 Identities=18% Similarity=0.332 Sum_probs=61.4
Q ss_pred eeccCCCcHHHHHHHHHcC------------CCcEEEEccCCCCC----CC--CCcccEEEecCcCcccc-cC---hHHH
Q 041513 9 SFAPLDVHEAQVQFALERG------------LPAMVGLLSTYQLP----YP--SRSFDVAHCSRCLVPWT-SY---DGLY 66 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg------------v~~~~~v~d~~~LP----fp--d~sFD~V~~s~~l~h~~-~d---~~~~ 66 (294)
.+.+.|+|+.|++.|+++. ..+.+.++|...++ |+ +++||+|+|..++ ||. .+ ...+
T Consensus 59 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l-~~~~~~~~~~~~~ 137 (313)
T 3bgv_A 59 KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVC-HYSFESYEQADMM 137 (313)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCG-GGGGGSHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCCEEEEEEecch-hhccCCHHHHHHH
Confidence 5667899999999998752 14567778888776 64 4599999999999 665 33 3579
Q ss_pred HHHHHhccCCCcEEEEEcC
Q 041513 67 LMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 67 L~Ei~RVLKPGG~~vis~p 85 (294)
|+++.|+|||||+|+++.+
T Consensus 138 l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 138 LRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp HHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHhCCCcEEEEecC
Confidence 9999999999999999875
No 68
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.54 E-value=2.4e-08 Score=87.73 Aligned_cols=75 Identities=13% Similarity=0.047 Sum_probs=59.4
Q ss_pred eeccCCCcHHHHHHHHHcC----CCcEEEEccCCCC--CCCCCcccEEEe-cCcCccccc----ChHHHHHHHHhccCCC
Q 041513 9 SFAPLDVHEAQVQFALERG----LPAMVGLLSTYQL--PYPSRSFDVAHC-SRCLVPWTS----YDGLYLMEIDRVLRPG 77 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----v~~~~~v~d~~~L--Pfpd~sFD~V~~-s~~l~h~~~----d~~~~L~Ei~RVLKPG 77 (294)
.+.+.|+|+.|++.|+++. ..+.+.+++.+.+ ||++++||+|++ .+++ +... +...+++|+.|+||||
T Consensus 85 ~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~Lkpg 163 (236)
T 1zx0_A 85 EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPG 163 (236)
T ss_dssp EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCC
Confidence 5678899999999998863 3466777888777 999999999999 6664 3221 1235799999999999
Q ss_pred cEEEEEc
Q 041513 78 GYWVVSG 84 (294)
Q Consensus 78 G~~vis~ 84 (294)
|+|++..
T Consensus 164 G~l~~~~ 170 (236)
T 1zx0_A 164 GVLTYCN 170 (236)
T ss_dssp EEEEECC
T ss_pred eEEEEEe
Confidence 9999865
No 69
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.52 E-value=5e-08 Score=86.03 Aligned_cols=76 Identities=18% Similarity=0.161 Sum_probs=60.2
Q ss_pred eeccCCCcHHHHHHHHHcC--CC--------------------------------c-EEEEccCCCC-CCCC---CcccE
Q 041513 9 SFAPLDVHEAQVQFALERG--LP--------------------------------A-MVGLLSTYQL-PYPS---RSFDV 49 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg--v~--------------------------------~-~~~v~d~~~L-Pfpd---~sFD~ 49 (294)
.+.+.|+|+.|++.|+++. .+ + .+.+++...+ ++++ ++||+
T Consensus 81 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~ 160 (265)
T 2i62_A 81 EIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADC 160 (265)
T ss_dssp EEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEE
T ss_pred eEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccE
Confidence 6778899999999998752 11 4 6677786665 4466 89999
Q ss_pred EEecCcCcccc---cChHHHHHHHHhccCCCcEEEEEc
Q 041513 50 AHCSRCLVPWT---SYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 50 V~~s~~l~h~~---~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
|+|..+++|.. .+...+++++.|+|||||+|+++.
T Consensus 161 v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 161 LLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp EEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 99999995333 345689999999999999999987
No 70
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.50 E-value=6.4e-08 Score=86.26 Aligned_cols=69 Identities=25% Similarity=0.353 Sum_probs=60.7
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|++++..+.+.+.+...+|+++++||+|++..+. ..++|+.|+|||||++++..+
T Consensus 111 ~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~--------~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 111 TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP--------CKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC--------CCHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh--------hhHHHHHHhcCCCcEEEEEEc
Confidence 567789999999999998877788888999999999999999987653 368999999999999999875
No 71
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.48 E-value=1.9e-07 Score=85.46 Aligned_cols=74 Identities=9% Similarity=0.021 Sum_probs=61.7
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccc-cChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT-SYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~-~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+|+.|++.|+++ ++ .+.+...+...+| ++||+|+|..+++|+. .+...+++++.|+|||||+++
T Consensus 115 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 191 (318)
T 2fk8_A 115 NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMT 191 (318)
T ss_dssp EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEE
Confidence 677889999999999876 33 3667777877765 7899999999997764 466789999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+..+
T Consensus 192 ~~~~ 195 (318)
T 2fk8_A 192 VQSS 195 (318)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9874
No 72
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.47 E-value=1.3e-07 Score=86.81 Aligned_cols=77 Identities=13% Similarity=0.164 Sum_probs=60.8
Q ss_pred eeeccCCCcHHHHHHHHHcC------------------------------------CCcEEEEccCCCCCCC-CCcccEE
Q 041513 8 MSFAPLDVHEAQVQFALERG------------------------------------LPAMVGLLSTYQLPYP-SRSFDVA 50 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~erg------------------------------------v~~~~~v~d~~~LPfp-d~sFD~V 50 (294)
..|.+.|+|+.||+.|++.. -.+.|.+.+....||+ .+.||+|
T Consensus 138 ~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI 217 (274)
T 1af7_A 138 WKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAI 217 (274)
T ss_dssp EEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEE
T ss_pred eEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEE
Confidence 47889999999999998741 0255666776666776 6889999
Q ss_pred EecCcCcccccCh-HHHHHHHHhccCCCcEEEEEc
Q 041513 51 HCSRCLVPWTSYD-GLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 51 ~~s~~l~h~~~d~-~~~L~Ei~RVLKPGG~~vis~ 84 (294)
+|..+++|+.+.. ..++.+++++|||||+|++..
T Consensus 218 ~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 218 FCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred EECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 9999996664321 579999999999999999854
No 73
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.47 E-value=1e-07 Score=82.91 Aligned_cols=76 Identities=16% Similarity=0.121 Sum_probs=62.5
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecC-cCcccc--cChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSR-CLVPWT--SYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~-~l~h~~--~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+|+.|++.|+++ +..+.+.+.+...++++ ++||+|+|.. +++|+. .+...+++++.|+|||||+++
T Consensus 56 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~ 134 (243)
T 3d2l_A 56 EVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLL 134 (243)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 567789999999999875 34677778888888887 8899999987 886553 344579999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+..+
T Consensus 135 ~~~~ 138 (243)
T 3d2l_A 135 FDVH 138 (243)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 9775
No 74
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.47 E-value=6.6e-08 Score=87.88 Aligned_cols=76 Identities=12% Similarity=0.071 Sum_probs=62.2
Q ss_pred eeccCCCcHHHHHHHHHcC--------CCcEEEEccCCCCCCCCCcccEEEecCcCcccccC--hHHHHHHHHhccCCCc
Q 041513 9 SFAPLDVHEAQVQFALERG--------LPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY--DGLYLMEIDRVLRPGG 78 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg--------v~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d--~~~~L~Ei~RVLKPGG 78 (294)
.+.+.|+|+.|++.|+++. ..+.+.++|...+|+ +++||+|+|+..+.|+.+. ...+|+++.|+|||||
T Consensus 106 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG 184 (299)
T 3g2m_A 106 EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGG 184 (299)
T ss_dssp CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCc
Confidence 5677899999999998762 346788889999998 7899999987555466543 3579999999999999
Q ss_pred EEEEEcC
Q 041513 79 YWVVSGP 85 (294)
Q Consensus 79 ~~vis~p 85 (294)
+|++..+
T Consensus 185 ~l~~~~~ 191 (299)
T 3g2m_A 185 KFLLSLA 191 (299)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 9999874
No 75
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.47 E-value=1.6e-07 Score=84.48 Aligned_cols=75 Identities=13% Similarity=0.179 Sum_probs=62.3
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCccccc-ChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTS-YDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~-d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ ++.+.+.+.|...+++ +++||+|+|..+++|+.. +...+++++.|+|||||++++.
T Consensus 144 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 144 DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 577889999999999875 4577888888888888 899999999999965532 2347999999999999998876
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
.
T Consensus 223 ~ 223 (286)
T 3m70_A 223 A 223 (286)
T ss_dssp E
T ss_pred E
Confidence 5
No 76
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.46 E-value=2.6e-07 Score=84.06 Aligned_cols=75 Identities=8% Similarity=0.024 Sum_probs=60.8
Q ss_pred eeeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccC--------hHHHHHHHHhc
Q 041513 8 MSFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY--------DGLYLMEIDRV 73 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d--------~~~~L~Ei~RV 73 (294)
..+.+.|+|++|++.|+++ ++ .+.+..+|...+ +++||+|+|..+++|+.+. ...+++++.|+
T Consensus 96 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~ 172 (302)
T 3hem_A 96 VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNL 172 (302)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHS
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHh
Confidence 3577889999999999876 44 366777777665 7999999999999766432 15899999999
Q ss_pred cCCCcEEEEEcC
Q 041513 74 LRPGGYWVVSGP 85 (294)
Q Consensus 74 LKPGG~~vis~p 85 (294)
|||||++++...
T Consensus 173 LkpgG~l~i~~~ 184 (302)
T 3hem_A 173 TPDDGRMLLHTI 184 (302)
T ss_dssp SCTTCEEEEEEE
T ss_pred cCCCcEEEEEEE
Confidence 999999999763
No 77
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.46 E-value=6e-07 Score=74.73 Aligned_cols=76 Identities=16% Similarity=0.083 Sum_probs=60.7
Q ss_pred eeccCCCcHHHHHHHHHc----CCC---cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP---AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~---~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+++.+++.|+++ +++ +.+...+... ++++++||+|++...++|...+...+++++.|+|||||+++
T Consensus 76 ~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 154 (194)
T 1dus_A 76 STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIW 154 (194)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEE
Confidence 566789999999999875 444 6676777655 45688999999998884324455689999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+..+
T Consensus 155 ~~~~ 158 (194)
T 1dus_A 155 VVIQ 158 (194)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9875
No 78
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.46 E-value=3.6e-08 Score=87.53 Aligned_cols=75 Identities=13% Similarity=-0.008 Sum_probs=56.0
Q ss_pred eeccCCCcHHHHHHHHHcC----CCcEEEEccCC--CCCCCCCcccEEEe-----cCcCcccccChHHHHHHHHhccCCC
Q 041513 9 SFAPLDVHEAQVQFALERG----LPAMVGLLSTY--QLPYPSRSFDVAHC-----SRCLVPWTSYDGLYLMEIDRVLRPG 77 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----v~~~~~v~d~~--~LPfpd~sFD~V~~-----s~~l~h~~~d~~~~L~Ei~RVLKPG 77 (294)
++..+|+|+.|++.|+++. ....+...+++ ..++++++||.|++ ...++|. .+...+++|+.|+||||
T Consensus 85 ~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~-~~~~~~~~e~~rvLkPG 163 (236)
T 3orh_A 85 EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHT-HQFNFIKNHAFRLLKPG 163 (236)
T ss_dssp EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTT-HHHHHHHHTHHHHEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeecccchhhh-cchhhhhhhhhheeCCC
Confidence 5667899999999999853 34455555544 34789999999974 3444333 35568999999999999
Q ss_pred cEEEEEc
Q 041513 78 GYWVVSG 84 (294)
Q Consensus 78 G~~vis~ 84 (294)
|.|++..
T Consensus 164 G~l~f~~ 170 (236)
T 3orh_A 164 GVLTYCN 170 (236)
T ss_dssp EEEEECC
T ss_pred CEEEEEe
Confidence 9999864
No 79
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.46 E-value=7.6e-07 Score=76.47 Aligned_cols=89 Identities=25% Similarity=0.287 Sum_probs=64.3
Q ss_pred cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcCCCCccccCCCcccChHHHHHHHHH
Q 041513 30 AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGPPISWKTSYRGWERDAKDLQKEQIS 109 (294)
Q Consensus 30 ~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~pp~~~~~~~~~w~~~~e~l~~~~~~ 109 (294)
+.+.+++...+|+++++||+|+|..++ |+ .++..+++++.|+|||||+++++...... .+ ...
T Consensus 99 ~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~~--------~~-------~~~ 161 (215)
T 2zfu_A 99 PRVTVCDMAQVPLEDESVDVAVFCLSL-MG-TNIRDFLEEANRVLKPGGLLKVAEVSSRF--------ED-------VRT 161 (215)
T ss_dssp TTEEESCTTSCSCCTTCEEEEEEESCC-CS-SCHHHHHHHHHHHEEEEEEEEEEECGGGC--------SC-------HHH
T ss_pred ceEEEeccccCCCCCCCEeEEEEehhc-cc-cCHHHHHHHHHHhCCCCeEEEEEEcCCCC--------CC-------HHH
Confidence 345667888899999999999999999 54 67779999999999999999998753211 01 134
Q ss_pred HHHHHHhhceEeeecccc-----eeEeeCCC
Q 041513 110 LENLATRLCWKKIAERGP-----IAVWRKPT 135 (294)
Q Consensus 110 le~l~~~lcW~~v~~~~~-----~~iw~Kp~ 135 (294)
+..+++..+++.+..... +.+++|..
T Consensus 162 ~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 162 FLRAVTKLGFKIVSKDLTNSHFFLFDFQKTG 192 (215)
T ss_dssp HHHHHHHTTEEEEEEECCSTTCEEEEEEECS
T ss_pred HHHHHHHCCCEEEEEecCCCeEEEEEEEecC
Confidence 556667777877654321 44556553
No 80
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.45 E-value=1.2e-07 Score=86.57 Aligned_cols=56 Identities=20% Similarity=0.100 Sum_probs=42.7
Q ss_pred cEEEEccCCCC-----CCCCCcccEEEecCcCcccc---c--ChHHHHHHHHhccCCCcEEEEEcC
Q 041513 30 AMVGLLSTYQL-----PYPSRSFDVAHCSRCLVPWT---S--YDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 30 ~~~~v~d~~~L-----Pfpd~sFD~V~~s~~l~h~~---~--d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
+.+..+|.... ++++++||+|+|..+++|++ . +...+|+++.|+|||||+|++...
T Consensus 156 v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 156 VVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp EEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred ceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 55666665443 36789999999999984432 1 445799999999999999999764
No 81
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.43 E-value=2.6e-07 Score=84.18 Aligned_cols=77 Identities=9% Similarity=-0.064 Sum_probs=59.7
Q ss_pred eeccCCCcHHHHHHHHHcC---CCcEEEEccCCCC-----------CCCCCcccEEEecCcCcccccC-hHHHHHHHHhc
Q 041513 9 SFAPLDVHEAQVQFALERG---LPAMVGLLSTYQL-----------PYPSRSFDVAHCSRCLVPWTSY-DGLYLMEIDRV 73 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---v~~~~~v~d~~~L-----------Pfpd~sFD~V~~s~~l~h~~~d-~~~~L~Ei~RV 73 (294)
.+...|+|+.||+.|+++. -.+.+..+|.... .++..+||+|++..+++|+.++ ...+|+++.|+
T Consensus 106 ~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~ 185 (274)
T 2qe6_A 106 RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDA 185 (274)
T ss_dssp EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHH
T ss_pred EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHh
Confidence 5677899999999999863 2466777776542 1333589999999999555432 66899999999
Q ss_pred cCCCcEEEEEcC
Q 041513 74 LRPGGYWVVSGP 85 (294)
Q Consensus 74 LKPGG~~vis~p 85 (294)
|||||+|+++..
T Consensus 186 L~pGG~l~i~~~ 197 (274)
T 2qe6_A 186 LAPGSYLFMTSL 197 (274)
T ss_dssp SCTTCEEEEEEE
T ss_pred CCCCcEEEEEEe
Confidence 999999999874
No 82
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.40 E-value=1.4e-07 Score=82.72 Aligned_cols=77 Identities=12% Similarity=-0.021 Sum_probs=61.1
Q ss_pred eeccCCCcHHHHHHHHHcCC--CcEEEEccCCCCCCCC-----CcccEEEecCcCccccc-ChHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALERGL--PAMVGLLSTYQLPYPS-----RSFDVAHCSRCLVPWTS-YDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv--~~~~~v~d~~~LPfpd-----~sFD~V~~s~~l~h~~~-d~~~~L~Ei~RVLKPGG~~ 80 (294)
.+.+.|+|+.|++.|+++.. .+.+.++|...++++. ..||+|++..+++|... +...+++++.|+|||||++
T Consensus 80 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 159 (245)
T 3ggd_A 80 RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAM 159 (245)
T ss_dssp CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEE
T ss_pred CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46678999999999998742 5677778887766543 34999999999955432 4568999999999999999
Q ss_pred EEEcC
Q 041513 81 VVSGP 85 (294)
Q Consensus 81 vis~p 85 (294)
++...
T Consensus 160 ~i~~~ 164 (245)
T 3ggd_A 160 YLIEL 164 (245)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 88764
No 83
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.38 E-value=1.9e-06 Score=74.47 Aligned_cols=76 Identities=16% Similarity=0.308 Sum_probs=60.9
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCC--CCCCcccEEEecCcCcccccC--------hHHHHHHHHhc
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLP--YPSRSFDVAHCSRCLVPWTSY--------DGLYLMEIDRV 73 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LP--fpd~sFD~V~~s~~l~h~~~d--------~~~~L~Ei~RV 73 (294)
.+.+.|+|+.|++.|+++ ++ .+.+..+++..++ +++++||+|++.+.. +|... ...++.++.|+
T Consensus 67 ~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 145 (214)
T 1yzh_A 67 NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSD-PWPKKRHEKRRLTYKTFLDTFKRI 145 (214)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCC-CCCSGGGGGGSTTSHHHHHHHHHH
T ss_pred CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCC-CccccchhhhccCCHHHHHHHHHH
Confidence 567789999999999874 44 4667778888887 889999999998765 44321 14799999999
Q ss_pred cCCCcEEEEEcC
Q 041513 74 LRPGGYWVVSGP 85 (294)
Q Consensus 74 LKPGG~~vis~p 85 (294)
|||||.|++...
T Consensus 146 LkpgG~l~~~~~ 157 (214)
T 1yzh_A 146 LPENGEIHFKTD 157 (214)
T ss_dssp SCTTCEEEEEES
T ss_pred cCCCcEEEEEeC
Confidence 999999999764
No 84
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.37 E-value=1.5e-07 Score=82.19 Aligned_cols=67 Identities=13% Similarity=0.141 Sum_probs=58.1
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccC-CCCCCC-CCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLST-YQLPYP-SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~-~~LPfp-d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|++.|+++...+.+.++|. +.+|++ +++||+|+|. .++..+++++.|+|||||+++.
T Consensus 72 ~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------~~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 72 RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------RGPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-------SCCSGGGGGHHHHEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-------CCHHHHHHHHHHHcCCCcEEEE
Confidence 56778999999999999866678888887 789999 9999999987 2445899999999999999993
No 85
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.34 E-value=5e-07 Score=75.83 Aligned_cols=78 Identities=18% Similarity=0.109 Sum_probs=55.8
Q ss_pred eeeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCC-CCCCcccEEEecCcCccc--------ccChHHHHHHHHhc
Q 041513 8 MSFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLP-YPSRSFDVAHCSRCLVPW--------TSYDGLYLMEIDRV 73 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LP-fpd~sFD~V~~s~~l~h~--------~~d~~~~L~Ei~RV 73 (294)
..+.+.|+|++|++.|+++ ++ .+.+.+.+.+.++ +++++||+|++.....+. ..+...+++++.|+
T Consensus 45 ~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 124 (185)
T 3mti_A 45 KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDR 124 (185)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHh
Confidence 3567789999999999875 44 4566665566653 568899999987433232 12334689999999
Q ss_pred cCCCcEEEEEcC
Q 041513 74 LRPGGYWVVSGP 85 (294)
Q Consensus 74 LKPGG~~vis~p 85 (294)
|||||+|++...
T Consensus 125 LkpgG~l~i~~~ 136 (185)
T 3mti_A 125 LEVGGRLAIMIY 136 (185)
T ss_dssp EEEEEEEEEEEC
T ss_pred cCCCcEEEEEEe
Confidence 999999999863
No 86
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.34 E-value=2.3e-06 Score=74.53 Aligned_cols=76 Identities=11% Similarity=0.201 Sum_probs=60.2
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCC--CCCCcccEEEecCcCcccccC--------hHHHHHHHHhc
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLP--YPSRSFDVAHCSRCLVPWTSY--------DGLYLMEIDRV 73 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LP--fpd~sFD~V~~s~~l~h~~~d--------~~~~L~Ei~RV 73 (294)
.+.+.|+|+.|++.|+++ ++ ++.+..+|+..++ |++++||.|++.+.. +|... ...+++++.|+
T Consensus 64 ~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~-p~~~~~~~~~rl~~~~~l~~~~~~ 142 (213)
T 2fca_A 64 NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSD-PWPKKRHEKRRLTYSHFLKKYEEV 142 (213)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCC-CCCSGGGGGGSTTSHHHHHHHHHH
T ss_pred CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCC-CCcCccccccccCcHHHHHHHHHH
Confidence 567789999999999874 44 4667777877776 889999999987665 44321 24789999999
Q ss_pred cCCCcEEEEEcC
Q 041513 74 LRPGGYWVVSGP 85 (294)
Q Consensus 74 LKPGG~~vis~p 85 (294)
|||||.|++...
T Consensus 143 LkpgG~l~~~td 154 (213)
T 2fca_A 143 MGKGGSIHFKTD 154 (213)
T ss_dssp HTTSCEEEEEES
T ss_pred cCCCCEEEEEeC
Confidence 999999999864
No 87
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.34 E-value=1e-06 Score=81.82 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=74.2
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEE-EccCCCCC---CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVG-LLSTYQLP---YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~-v~d~~~LP---fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.|+|++||+.+.++...+... ..+...++ ++..+||+|+|..++++. ..+|.|+.|+|||||+|++..
T Consensus 110 ~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl----~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 110 LVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL----NLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp EEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG----GGTHHHHHHHSCTTCEEEEEE
T ss_pred EEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhhH----HHHHHHHHHHcCcCCEEEEEE
Confidence 4667899999999976654333222 12333333 345679999998888432 489999999999999999987
Q ss_pred CCCCccccC----CCcccChHHHHHHHHHHHHHHHhhceEeee
Q 041513 85 PPISWKTSY----RGWERDAKDLQKEQISLENLATRLCWKKIA 123 (294)
Q Consensus 85 pp~~~~~~~----~~w~~~~e~l~~~~~~le~l~~~lcW~~v~ 123 (294)
.|..-..+. .|..+++...+...+.+.+++...+|....
T Consensus 186 kPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 186 KPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp CGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred CcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 654322111 244455554455666777777888887654
No 88
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.34 E-value=4.2e-07 Score=79.87 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=60.6
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCcccc--cChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT--SYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~--~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|++.|+++ +..+.+.+++...++++ ++||+|+|..+..++. ++...+++++.|+|||||.|++
T Consensus 65 ~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 65 EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 567889999999999875 45677888888888876 6899999875543443 2345799999999999999998
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
..+
T Consensus 144 ~~~ 146 (252)
T 1wzn_A 144 DFP 146 (252)
T ss_dssp EEE
T ss_pred ecc
Confidence 764
No 89
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.32 E-value=2.6e-06 Score=70.43 Aligned_cols=73 Identities=14% Similarity=0.082 Sum_probs=55.8
Q ss_pred eeeccCCCcHHHHHHHHHc----CCC-cEEEEccC-CCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 8 MSFAPLDVHEAQVQFALER----GLP-AMVGLLST-YQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv~-~~~~v~d~-~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
..+...|+|+.|++.|+++ +++ ..+...+. +.++..+++||+|++..+++| ..+++++.|+|||||+++
T Consensus 50 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~ 124 (178)
T 3hm2_A 50 TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTA-----PGVFAAAWKRLPVGGRLV 124 (178)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-TTC-----TTHHHHHHHTCCTTCEEE
T ss_pred CeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcccH-----HHHHHHHHHhcCCCCEEE
Confidence 4577889999999999875 444 23555554 444444489999999999944 479999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+...
T Consensus 125 ~~~~ 128 (178)
T 3hm2_A 125 ANAV 128 (178)
T ss_dssp EEEC
T ss_pred EEee
Confidence 9875
No 90
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.29 E-value=2.7e-06 Score=88.90 Aligned_cols=76 Identities=13% Similarity=0.158 Sum_probs=62.5
Q ss_pred eeccCCCcHHHHHHHHHc----------CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccCh-HHHHHHHHhccCC
Q 041513 9 SFAPLDVHEAQVQFALER----------GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD-GLYLMEIDRVLRP 76 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----------gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~-~~~L~Ei~RVLKP 76 (294)
.+.+.|+|+.|++.|+++ +. .+.+.++|...+|+++++||+|+|..+++|+.+.. ..+++++.|+|||
T Consensus 748 ~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKP 827 (950)
T 3htx_A 748 TIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHP 827 (950)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCC
T ss_pred eEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCC
Confidence 577889999999999872 33 46777889999999999999999999996655322 2489999999999
Q ss_pred CcEEEEEcC
Q 041513 77 GGYWVVSGP 85 (294)
Q Consensus 77 GG~~vis~p 85 (294)
| .++++.+
T Consensus 828 G-~LIISTP 835 (950)
T 3htx_A 828 K-LLIVSTP 835 (950)
T ss_dssp S-EEEEEEC
T ss_pred C-EEEEEec
Confidence 9 8888764
No 91
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.28 E-value=9.8e-07 Score=82.20 Aligned_cols=72 Identities=11% Similarity=0.063 Sum_probs=58.9
Q ss_pred eeeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 8 MSFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
-.+.+.|+|++|++.|+++ |+ .+.+.++|+..+| +++||+|++... ..+...+++|+.|+|||||+|++
T Consensus 147 a~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~----~~d~~~~l~el~r~LkPGG~Lvv 220 (298)
T 3fpf_A 147 MRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL----AEPKRRVFRNIHRYVDTETRIIY 220 (298)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT----CSCHHHHHHHHHHHCCTTCEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC----ccCHHHHHHHHHHHcCCCcEEEE
Confidence 3577789999999999875 55 4667778877765 799999998644 35677899999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
...
T Consensus 221 ~~~ 223 (298)
T 3fpf_A 221 RTY 223 (298)
T ss_dssp EEC
T ss_pred EcC
Confidence 763
No 92
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.25 E-value=8e-07 Score=76.64 Aligned_cols=112 Identities=18% Similarity=0.139 Sum_probs=72.1
Q ss_pred eeeccCCCcHHHHHHH----HH----cCC-CcEEEEccCCCCCCCCCcccEEEecCcCc----ccccChHHHHHHHHhcc
Q 041513 8 MSFAPLDVHEAQVQFA----LE----RGL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLV----PWTSYDGLYLMEIDRVL 74 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A----~e----rgv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~----h~~~d~~~~L~Ei~RVL 74 (294)
..+.+.|+|+.|++.+ ++ .+. .+.+.++|.+.+|+++++ |.|+...... |+..++..+++|+.|+|
T Consensus 52 ~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~L 130 (218)
T 3mq2_A 52 RLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVC 130 (218)
T ss_dssp EEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTE
T ss_pred CEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHc
Confidence 4577889999988853 22 234 567778899999999888 8887444321 23455568999999999
Q ss_pred CCCcEEEEEcCCCCccccCCCc----ccChHHHHHHHHHHHHHHHhhceEeee
Q 041513 75 RPGGYWVVSGPPISWKTSYRGW----ERDAKDLQKEQISLENLATRLCWKKIA 123 (294)
Q Consensus 75 KPGG~~vis~pp~~~~~~~~~w----~~~~e~l~~~~~~le~l~~~lcW~~v~ 123 (294)
||||+|+++.....|....... ..+.+. ..+.+..+....+|+...
T Consensus 131 kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 131 RPGASFLVALNLHAWRPSVPEVGEHPEPTPDS---ADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHH---HHHHHHHHHHHTTEEEEE
T ss_pred CCCcEEEEEeccccccccccccccCCccchHH---HHHHHHHHHHHcCCCcee
Confidence 9999999976432222111100 011121 233477777778887654
No 93
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.24 E-value=1.2e-06 Score=83.87 Aligned_cols=78 Identities=15% Similarity=0.106 Sum_probs=64.7
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCccc----ccChHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPW----TSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~----~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
.+...|+|+.|++.|+++ ++.+.+...|....++++++||+|+|...+++. ..+...++.++.|+|||||++
T Consensus 257 ~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l 336 (381)
T 3dmg_A 257 EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVF 336 (381)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEE
Confidence 567789999999999874 456788888988888888999999999888431 334457999999999999999
Q ss_pred EEEcCC
Q 041513 81 VVSGPP 86 (294)
Q Consensus 81 vis~pp 86 (294)
+++.++
T Consensus 337 ~iv~n~ 342 (381)
T 3dmg_A 337 FLVSNP 342 (381)
T ss_dssp EEEECT
T ss_pred EEEEcC
Confidence 998864
No 94
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.22 E-value=6e-07 Score=79.00 Aligned_cols=76 Identities=20% Similarity=0.278 Sum_probs=59.7
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCC-C--CCCCcccEEEecCcCcccccChH--------HHHHHHHh
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQL-P--YPSRSFDVAHCSRCLVPWTSYDG--------LYLMEIDR 72 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~L-P--fpd~sFD~V~~s~~l~h~~~d~~--------~~L~Ei~R 72 (294)
.+.+.|+|+.|++.|+++ ++ ++.+..+|+..+ + +++++||.|++.+.. +|..... .+++++.|
T Consensus 60 ~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~-p~~~~~~~~rr~~~~~~l~~~~r 138 (218)
T 3dxy_A 60 DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPD-PWHKARHNKRRIVQVPFAELVKS 138 (218)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCC-CCCSGGGGGGSSCSHHHHHHHHH
T ss_pred eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCC-CccchhhhhhhhhhHHHHHHHHH
Confidence 467789999999998764 44 466777776663 4 889999999998766 5543321 49999999
Q ss_pred ccCCCcEEEEEcC
Q 041513 73 VLRPGGYWVVSGP 85 (294)
Q Consensus 73 VLKPGG~~vis~p 85 (294)
+|||||+|+++..
T Consensus 139 ~LkpGG~l~i~td 151 (218)
T 3dxy_A 139 KLQLGGVFHMATD 151 (218)
T ss_dssp HEEEEEEEEEEES
T ss_pred HcCCCcEEEEEeC
Confidence 9999999999875
No 95
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.22 E-value=7.8e-06 Score=70.80 Aligned_cols=78 Identities=17% Similarity=0.080 Sum_probs=58.7
Q ss_pred eeeccCCCcHHHHHHHHHc----CCCcEEEEccCC-CCCCCCCcccEEEecCcCccccc------------------ChH
Q 041513 8 MSFAPLDVHEAQVQFALER----GLPAMVGLLSTY-QLPYPSRSFDVAHCSRCLVPWTS------------------YDG 64 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~-~LPfpd~sFD~V~~s~~l~h~~~------------------d~~ 64 (294)
..+.+.|+|+.|++.|+++ ++.+.+.++|.. ..++++++||+|+|.-.+++... ...
T Consensus 80 ~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T 3evz_A 80 CKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSV 159 (230)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHH
Confidence 3567889999999999874 456777777754 34677899999999866633211 125
Q ss_pred HHHHHHHhccCCCcEEEEEcC
Q 041513 65 LYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 65 ~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+++++.|+|||||++++..+
T Consensus 160 ~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 160 KLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp HHHHHHGGGEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEEEec
Confidence 799999999999999999764
No 96
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.20 E-value=8.8e-07 Score=78.80 Aligned_cols=76 Identities=12% Similarity=0.041 Sum_probs=57.9
Q ss_pred eeccCCCcHH------HHHHHHHc----CC--CcEEEEcc---CCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhc
Q 041513 9 SFAPLDVHEA------QVQFALER----GL--PAMVGLLS---TYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRV 73 (294)
Q Consensus 9 s~ap~D~S~~------mlq~A~er----gv--~~~~~v~d---~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RV 73 (294)
.+.+.|+|+. |++.|+++ ++ .+.+...| ...+|+++++||+|+|..+++|+ .++..+++.+.++
T Consensus 70 ~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~~~~~~~l 148 (275)
T 3bkx_A 70 HVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYF-ASANALALLFKNM 148 (275)
T ss_dssp EEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGS-SCHHHHHHHHHHH
T ss_pred EEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhC-CCHHHHHHHHHHH
Confidence 4666788876 88888775 23 35666676 66788999999999999999554 5565666667777
Q ss_pred cCCCcEEEEEcC
Q 041513 74 LRPGGYWVVSGP 85 (294)
Q Consensus 74 LKPGG~~vis~p 85 (294)
++|||++++...
T Consensus 149 ~~~gG~l~~~~~ 160 (275)
T 3bkx_A 149 AAVCDHVDVAEW 160 (275)
T ss_dssp TTTCSEEEEEEE
T ss_pred hCCCCEEEEEEe
Confidence 777999999873
No 97
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.20 E-value=2.7e-06 Score=74.97 Aligned_cols=71 Identities=10% Similarity=0.070 Sum_probs=57.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCC---CCcccEEEecCcCcccccChHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYP---SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfp---d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
.+.+.|+|+.|++.|+++ ++ ++.+.+++++.++++ +++||+|+|... .+...+++++.|+|||||+|
T Consensus 96 ~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~-----~~~~~~l~~~~~~LkpgG~l 170 (240)
T 1xdz_A 96 HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAV-----ARLSVLSELCLPLVKKNGLF 170 (240)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECC-----SCHHHHHHHHGGGEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEecc-----CCHHHHHHHHHHhcCCCCEE
Confidence 466779999999999874 55 467777888777775 689999998752 35668999999999999999
Q ss_pred EEEc
Q 041513 81 VVSG 84 (294)
Q Consensus 81 vis~ 84 (294)
++..
T Consensus 171 ~~~~ 174 (240)
T 1xdz_A 171 VALK 174 (240)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9864
No 98
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.19 E-value=2.7e-07 Score=89.44 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=55.5
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCC------CCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYP------SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfp------d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|. .....+.+.++|+..+||. +++||+|+|..+ |+..+...+|+|+.|+|||||+|++
T Consensus 249 ~V~GVDiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs--H~~~d~~~aL~el~rvLKPGGvlVi 322 (419)
T 3sso_A 249 QIYGLDIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS--HINAHVRTSFAALFPHVRPGGLYVI 322 (419)
T ss_dssp EEEEEESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC--CCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEEECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCccEEEECCc--ccchhHHHHHHHHHHhcCCCeEEEE
Confidence 455667777773 2334578888999999998 799999998754 4445667899999999999999999
Q ss_pred Ec
Q 041513 83 SG 84 (294)
Q Consensus 83 s~ 84 (294)
..
T Consensus 323 ~D 324 (419)
T 3sso_A 323 ED 324 (419)
T ss_dssp EC
T ss_pred Ee
Confidence 86
No 99
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.19 E-value=2.1e-06 Score=79.30 Aligned_cols=74 Identities=26% Similarity=0.234 Sum_probs=58.4
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccC-hHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY-DGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d-~~~~L~Ei~RVLKPGG~~v 81 (294)
.+...|+ +.|++.|+++ ++ .+.+...|.. .|+|. .||+|+|..++|||.++ ...+|+++.|+|||||+++
T Consensus 195 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~ 271 (332)
T 3i53_A 195 SGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVL 271 (332)
T ss_dssp EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEE
T ss_pred eEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 3445699 9999999875 43 3667777765 56666 89999999999777644 2579999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+...
T Consensus 272 i~e~ 275 (332)
T 3i53_A 272 VIEA 275 (332)
T ss_dssp EEEC
T ss_pred EEee
Confidence 9874
No 100
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.19 E-value=1.9e-06 Score=81.10 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=59.7
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCC--CCCCCcccEEEecCcCcccccCh-HHHHHHHHhccCCCcE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQL--PYPSRSFDVAHCSRCLVPWTSYD-GLYLMEIDRVLRPGGY 79 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~L--Pfpd~sFD~V~~s~~l~h~~~d~-~~~L~Ei~RVLKPGG~ 79 (294)
.+...|+ +.|++.|+++ ++ .+.+...|.... |+| ++||+|++..+++||.++. ..+|+++.|+|||||+
T Consensus 205 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~ 282 (363)
T 3dp7_A 205 EVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSK 282 (363)
T ss_dssp EEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCE
T ss_pred EEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcE
Confidence 4666798 9999999875 33 366777776664 677 8899999999997776443 4689999999999999
Q ss_pred EEEEcC
Q 041513 80 WVVSGP 85 (294)
Q Consensus 80 ~vis~p 85 (294)
+++...
T Consensus 283 l~i~e~ 288 (363)
T 3dp7_A 283 VYIMET 288 (363)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 999774
No 101
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.18 E-value=1.2e-06 Score=74.06 Aligned_cols=77 Identities=13% Similarity=0.019 Sum_probs=60.9
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCC--CCCCcccEEEecCcCcccccChHHHHHHHHh--ccCCCcE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLP--YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDR--VLRPGGY 79 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LP--fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~R--VLKPGG~ 79 (294)
.+.+.|+|+.|++.|+++ ++ .+.+.++|...++ +++++||+|++...+++...+...++.++.+ +|||||+
T Consensus 69 ~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~ 148 (189)
T 3p9n_A 69 SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTV 148 (189)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeE
Confidence 467789999999999875 44 4667777766553 5688999999988874433556689999999 9999999
Q ss_pred EEEEcC
Q 041513 80 WVVSGP 85 (294)
Q Consensus 80 ~vis~p 85 (294)
|++..+
T Consensus 149 l~~~~~ 154 (189)
T 3p9n_A 149 AVVERA 154 (189)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999764
No 102
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.18 E-value=1.1e-06 Score=80.18 Aligned_cols=75 Identities=12% Similarity=0.025 Sum_probs=55.9
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCC-----CCCcccEEEecCcCccccc-ChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPY-----PSRSFDVAHCSRCLVPWTS-YDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPf-----pd~sFD~V~~s~~l~h~~~-d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|++|++.|+++.... ....+...+++ .+++||+|+|..+++|+.. +...+++++.|+| |||++++
T Consensus 69 ~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~l 146 (261)
T 3iv6_A 69 SVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRA 146 (261)
T ss_dssp EEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEE
Confidence 5677899999999999875322 11223333333 2679999999999977653 3456999999999 9999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
+.+
T Consensus 147 S~~ 149 (261)
T 3iv6_A 147 SVK 149 (261)
T ss_dssp EEE
T ss_pred Eec
Confidence 985
No 103
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.17 E-value=1.4e-05 Score=68.06 Aligned_cols=73 Identities=11% Similarity=-0.042 Sum_probs=58.0
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+...|+|++|++.|+++ ++ .+.+...+.........+||+|++..++ + +...+++++.|+|||||++++.
T Consensus 66 ~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~-~---~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 66 RIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSG-G---MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCT-T---CHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCC-c---CHHHHHHHHHHhcCCCeEEEEE
Confidence 466789999999999875 44 3566667765444445789999999887 3 5668999999999999999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
..
T Consensus 142 ~~ 143 (204)
T 3e05_A 142 AV 143 (204)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 104
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.15 E-value=1.3e-06 Score=80.23 Aligned_cols=75 Identities=17% Similarity=0.152 Sum_probs=60.8
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccC-hHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY-DGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d-~~~~L~Ei~RVLKPGG~~v 81 (294)
.+...|+| .+++.|+++ ++ .+.+...|....+++++ ||+|+|..+++||.++ ...+++++.|+|||||+++
T Consensus 191 ~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~ 268 (335)
T 2r3s_A 191 EIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVI 268 (335)
T ss_dssp EEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEE
Confidence 56777999 999999875 44 36777788777788766 9999999999776432 2579999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+..+
T Consensus 269 i~e~ 272 (335)
T 2r3s_A 269 VFDF 272 (335)
T ss_dssp EEEC
T ss_pred EEee
Confidence 9874
No 105
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.14 E-value=1.2e-05 Score=69.58 Aligned_cols=71 Identities=8% Similarity=-0.049 Sum_probs=55.8
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|++|++.|+++ +++ +.+...+..........||+|++..++ +.. ++.++.|+|||||++++
T Consensus 79 ~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-----~~~-~l~~~~~~LkpgG~lv~ 152 (204)
T 3njr_A 79 RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-----SQA-LYDRLWEWLAPGTRIVA 152 (204)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC-----CHH-HHHHHHHHSCTTCEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc-----cHH-HHHHHHHhcCCCcEEEE
Confidence 466789999999999875 454 667777776633334679999988755 455 99999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
+..
T Consensus 153 ~~~ 155 (204)
T 3njr_A 153 NAV 155 (204)
T ss_dssp EEC
T ss_pred Eec
Confidence 875
No 106
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.13 E-value=1.8e-06 Score=76.90 Aligned_cols=76 Identities=17% Similarity=0.151 Sum_probs=57.1
Q ss_pred eeccCCCcHHHHHHHHHc----------CC-CcEEEEccCCC-CC--CCCCcccEEEecCcCcccccC--------hHHH
Q 041513 9 SFAPLDVHEAQVQFALER----------GL-PAMVGLLSTYQ-LP--YPSRSFDVAHCSRCLVPWTSY--------DGLY 66 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----------gv-~~~~~v~d~~~-LP--fpd~sFD~V~~s~~l~h~~~d--------~~~~ 66 (294)
.+.+.|+|+.|++.|+++ +. ++.+..+|+.. +| |++++||.|++.+.- +|... ...+
T Consensus 72 ~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~d-p~~k~~h~krr~~~~~~ 150 (235)
T 3ckk_A 72 LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPD-PHFKRTKHKWRIISPTL 150 (235)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESCC------------CCCHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCCC-chhhhhhhhhhhhhHHH
Confidence 567789999999998753 33 46777788775 77 899999999876654 34211 1369
Q ss_pred HHHHHhccCCCcEEEEEcC
Q 041513 67 LMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 67 L~Ei~RVLKPGG~~vis~p 85 (294)
++++.|+|||||.|++...
T Consensus 151 l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 151 LAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp HHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHCCCCCEEEEEeC
Confidence 9999999999999999764
No 107
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.12 E-value=1.6e-06 Score=73.38 Aligned_cols=76 Identities=12% Similarity=0.078 Sum_probs=58.9
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCC-CCCCcccEEEecCcCccc-----c---cChHHHHHHHHhc
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLP-YPSRSFDVAHCSRCLVPW-----T---SYDGLYLMEIDRV 73 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LP-fpd~sFD~V~~s~~l~h~-----~---~d~~~~L~Ei~RV 73 (294)
.+.+.|+++.|++.|+++ ++ .+.+...|...++ +.+++||+|++...+.+. . .+...+++++.|+
T Consensus 49 ~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 128 (197)
T 3eey_A 49 RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMEL 128 (197)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHh
Confidence 567789999999999875 33 4667777877776 777999999988655221 1 1234699999999
Q ss_pred cCCCcEEEEEc
Q 041513 74 LRPGGYWVVSG 84 (294)
Q Consensus 74 LKPGG~~vis~ 84 (294)
|||||++++..
T Consensus 129 Lk~gG~l~~~~ 139 (197)
T 3eey_A 129 LVTGGIITVVI 139 (197)
T ss_dssp EEEEEEEEEEE
T ss_pred CcCCCEEEEEE
Confidence 99999999986
No 108
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.11 E-value=2.8e-06 Score=72.50 Aligned_cols=93 Identities=15% Similarity=0.073 Sum_probs=67.6
Q ss_pred eeccCCCcHHHHHHHHHc----CCC-cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP-AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~-~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ ++. +.+...|... +.+++||+|++...+++ ...+++++.|+|||||+++++
T Consensus 85 ~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~~~~----~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 85 SVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANILAEI----LLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESCHHH----HHHHGGGSGGGEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCcHHH----HHHHHHHHHHhcCCCCEEEEE
Confidence 567789999999999875 444 6676677644 45789999999987733 247999999999999999997
Q ss_pred cCCCCccccCCCcccChHHHHHHHHHHHHHHHhhceEeeec
Q 041513 84 GPPISWKTSYRGWERDAKDLQKEQISLENLATRLCWKKIAE 124 (294)
Q Consensus 84 ~pp~~~~~~~~~w~~~~e~l~~~~~~le~l~~~lcW~~v~~ 124 (294)
..... . ...+.++.+..+++.+..
T Consensus 159 ~~~~~----------~-------~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 159 GIDYL----------Q-------LPKIEQALAENSFQIDLK 182 (205)
T ss_dssp EEEGG----------G-------HHHHHHHHHHTTEEEEEE
T ss_pred ecCcc----------c-------HHHHHHHHHHcCCceEEe
Confidence 63210 1 123555666677776653
No 109
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.10 E-value=2.8e-06 Score=72.66 Aligned_cols=71 Identities=14% Similarity=0.024 Sum_probs=57.8
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+...|+|+.+++.|+++ ++ .+.+...|....+.++++||+|++..+++|.. + ++.++|||||+++++
T Consensus 101 ~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~-~------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 101 HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIP-T------ALMTQLDEGGILVLP 173 (210)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSSCC-T------HHHHTEEEEEEEEEE
T ss_pred EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchhhhh-H------HHHHhcccCcEEEEE
Confidence 466789999999999875 44 36677778777777789999999999995543 2 689999999999999
Q ss_pred cCC
Q 041513 84 GPP 86 (294)
Q Consensus 84 ~pp 86 (294)
.++
T Consensus 174 ~~~ 176 (210)
T 3lbf_A 174 VGE 176 (210)
T ss_dssp ECS
T ss_pred EcC
Confidence 875
No 110
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.06 E-value=1.7e-06 Score=79.82 Aligned_cols=75 Identities=8% Similarity=-0.059 Sum_probs=57.3
Q ss_pred eeccCCCcHHHHHHHHHcC--C---CcEEEEccCCCCC------CCCCccc-----EEEecCcCcccccC---hHHHHHH
Q 041513 9 SFAPLDVHEAQVQFALERG--L---PAMVGLLSTYQLP------YPSRSFD-----VAHCSRCLVPWTSY---DGLYLME 69 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg--v---~~~~~v~d~~~LP------fpd~sFD-----~V~~s~~l~h~~~d---~~~~L~E 69 (294)
.+...|.|+.||+.|+++- . .+.+.++|...++ ..+++|| .|+++.+| ||..+ +..++++
T Consensus 107 rVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avL-H~l~d~~~p~~~l~~ 185 (277)
T 3giw_A 107 RVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIV-HFVLDEDDAVGIVRR 185 (277)
T ss_dssp EEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCG-GGSCGGGCHHHHHHH
T ss_pred EEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhH-hcCCchhhHHHHHHH
Confidence 4666799999999998862 1 2567778877652 1146676 58888888 66655 4579999
Q ss_pred HHhccCCCcEEEEEc
Q 041513 70 IDRVLRPGGYWVVSG 84 (294)
Q Consensus 70 i~RVLKPGG~~vis~ 84 (294)
+.++|+|||+|+++.
T Consensus 186 l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 186 LLEPLPSGSYLAMSI 200 (277)
T ss_dssp HHTTSCTTCEEEEEE
T ss_pred HHHhCCCCcEEEEEe
Confidence 999999999999986
No 111
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.04 E-value=4.4e-06 Score=78.47 Aligned_cols=75 Identities=13% Similarity=0.108 Sum_probs=59.1
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCCCCCCcccEEEecCcCc--ccccChHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLPYPSRSFDVAHCSRCLV--PWTSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LPfpd~sFD~V~~s~~l~--h~~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
.+.+.|+| +|++.|+++ ++. +.+..++.+.+++++++||+|+|..+.+ +.......++.++.|+|||||++
T Consensus 91 ~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~l 169 (349)
T 3q7e_A 91 KVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLI 169 (349)
T ss_dssp EEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEE
T ss_pred EEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEE
Confidence 46677999 499988764 443 6788889999999999999999965432 34456778999999999999999
Q ss_pred EEEc
Q 041513 81 VVSG 84 (294)
Q Consensus 81 vis~ 84 (294)
+...
T Consensus 170 i~~~ 173 (349)
T 3q7e_A 170 FPDR 173 (349)
T ss_dssp ESCE
T ss_pred cccc
Confidence 8543
No 112
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.04 E-value=5.7e-06 Score=72.16 Aligned_cols=71 Identities=10% Similarity=0.015 Sum_probs=50.0
Q ss_pred eeccCCCcHHHHH----HHHHcCCCcEEEEccCCC----CCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQ----FALERGLPAMVGLLSTYQ----LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq----~A~ergv~~~~~v~d~~~----LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
.+.+.|+|+.|++ .|+++ .++.+.++|+.. .+++ ++||+|+|.... + .+...+++|+.|+|||||+|
T Consensus 83 ~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~~~-~--~~~~~~l~~~~r~LkpgG~l 157 (210)
T 1nt2_A 83 IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQDIAQ-K--NQIEILKANAEFFLKEKGEV 157 (210)
T ss_dssp EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEECCCS-T--THHHHHHHHHHHHEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEeccC-h--hHHHHHHHHHHHHhCCCCEE
Confidence 5678899998654 44443 245555666655 3565 899999987322 2 23334699999999999999
Q ss_pred EEEc
Q 041513 81 VVSG 84 (294)
Q Consensus 81 vis~ 84 (294)
+++.
T Consensus 158 ~i~~ 161 (210)
T 1nt2_A 158 VIMV 161 (210)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
No 113
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.04 E-value=1.7e-06 Score=84.19 Aligned_cols=74 Identities=14% Similarity=0.036 Sum_probs=59.5
Q ss_pred eccCCCcHHHHHHHHHc-----------CC---CcEEEEccCCCCCCCC--CcccEEEecCcCcccccChHHHHHHHHhc
Q 041513 10 FAPLDVHEAQVQFALER-----------GL---PAMVGLLSTYQLPYPS--RSFDVAHCSRCLVPWTSYDGLYLMEIDRV 73 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~er-----------gv---~~~~~v~d~~~LPfpd--~sFD~V~~s~~l~h~~~d~~~~L~Ei~RV 73 (294)
+.++|+|+.|++.|++. |+ .+.+.++|...+||++ ..||+|++...+ + ..+....|.|+.|+
T Consensus 200 VvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F-~pdl~~aL~Ei~Rv 277 (438)
T 3uwp_A 200 HYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFA-F-GPEVDHQLKERFAN 277 (438)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTT-C-CHHHHHHHHHHHTT
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEcccc-c-CchHHHHHHHHHHc
Confidence 67889999999888752 32 4677888999999875 579999987665 3 45666899999999
Q ss_pred cCCCcEEEEEcC
Q 041513 74 LRPGGYWVVSGP 85 (294)
Q Consensus 74 LKPGG~~vis~p 85 (294)
|||||+|+++..
T Consensus 278 LKPGGrIVssE~ 289 (438)
T 3uwp_A 278 MKEGGRIVSSKP 289 (438)
T ss_dssp SCTTCEEEESSC
T ss_pred CCCCcEEEEeec
Confidence 999999999864
No 114
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.03 E-value=6.8e-06 Score=77.38 Aligned_cols=74 Identities=20% Similarity=0.169 Sum_probs=58.1
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccCh-HHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD-GLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~-~~~L~Ei~RVLKPGG~~v 81 (294)
.+...|+ +.+++.|+++ ++ .+.+...|.. .|+|. .||+|++..++++|.++. ..+|+++.|+|||||+|+
T Consensus 228 ~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~ 304 (369)
T 3gwz_A 228 RGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLL 304 (369)
T ss_dssp EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEE
T ss_pred eEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4566799 9999999874 33 3667777766 67777 899999999996665432 269999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+...
T Consensus 305 i~e~ 308 (369)
T 3gwz_A 305 VIDN 308 (369)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9763
No 115
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.00 E-value=4.1e-06 Score=78.27 Aligned_cols=75 Identities=15% Similarity=0.093 Sum_probs=58.5
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCccc----ccChHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPW----TSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~----~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
.+...|+|+.|++.|+++ ++...+...+... +.+++||+|+|...+++. ..+...+++++.|+|||||.+
T Consensus 222 ~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~--~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l 299 (343)
T 2pjd_A 222 RLTLCDVSAPAVEASRATLAANGVEGEVFASNVFS--EVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGEL 299 (343)
T ss_dssp BCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT--TCCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccc--cccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEE
Confidence 567789999999999875 4556666666544 447899999999998431 233457999999999999999
Q ss_pred EEEcC
Q 041513 81 VVSGP 85 (294)
Q Consensus 81 vis~p 85 (294)
++..+
T Consensus 300 ~i~~~ 304 (343)
T 2pjd_A 300 RIVAN 304 (343)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99875
No 116
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.00 E-value=1.1e-05 Score=71.98 Aligned_cols=71 Identities=17% Similarity=0.090 Sum_probs=58.3
Q ss_pred eeccCCCcHHHHHHHHHc-----C--C-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALER-----G--L-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er-----g--v-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
.+...|+|+.+++.|+++ + . .+.+...|...+++++++||+|++.. .++..++.++.|+|||||++
T Consensus 126 ~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~pgG~l 199 (280)
T 1i9g_A 126 QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDM------LAPWEVLDAVSRLLVAGGVL 199 (280)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEES------SCGGGGHHHHHHHEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECC------cCHHHHHHHHHHhCCCCCEE
Confidence 466779999999999875 3 2 46677778888888899999999832 24558999999999999999
Q ss_pred EEEcC
Q 041513 81 VVSGP 85 (294)
Q Consensus 81 vis~p 85 (294)
++..+
T Consensus 200 ~~~~~ 204 (280)
T 1i9g_A 200 MVYVA 204 (280)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 99886
No 117
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.99 E-value=5.7e-06 Score=77.25 Aligned_cols=74 Identities=27% Similarity=0.333 Sum_probs=57.1
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccCh-HHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD-GLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~-~~~L~Ei~RVLKPGG~~v 81 (294)
.+...|+ +.|++.|+++ ++ .+.+...|... +++.+ ||+|++..+++||.+.. ..+|+++.|+|||||+++
T Consensus 208 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~ 284 (374)
T 1qzz_A 208 RGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPVT-ADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLL 284 (374)
T ss_dssp EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCCC-CCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 4566799 9999999874 44 36677777544 45544 99999999997765432 379999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+...
T Consensus 285 i~e~ 288 (374)
T 1qzz_A 285 VLDR 288 (374)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9765
No 118
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.99 E-value=4.2e-06 Score=72.05 Aligned_cols=77 Identities=13% Similarity=0.072 Sum_probs=58.4
Q ss_pred eeccCCCcHHHHHHHHHc----CC---CcEEEEccCCCC-C-CCCCc-ccEEEecCcCcccccChHHHHHHH--HhccCC
Q 041513 9 SFAPLDVHEAQVQFALER----GL---PAMVGLLSTYQL-P-YPSRS-FDVAHCSRCLVPWTSYDGLYLMEI--DRVLRP 76 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv---~~~~~v~d~~~L-P-fpd~s-FD~V~~s~~l~h~~~d~~~~L~Ei--~RVLKP 76 (294)
.+.+.|+|+.|++.|+++ ++ .+.+..+|...+ + +++++ ||+|++...+ | ..+...++.++ .|+|||
T Consensus 78 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~-~-~~~~~~~l~~~~~~~~Lkp 155 (201)
T 2ift_A 78 KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPF-H-FNLAEQAISLLCENNWLKP 155 (201)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCS-S-SCHHHHHHHHHHHTTCEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCCC-C-CccHHHHHHHHHhcCccCC
Confidence 467789999999999874 44 466767775543 3 24788 9999998776 4 34455789999 789999
Q ss_pred CcEEEEEcCCC
Q 041513 77 GGYWVVSGPPI 87 (294)
Q Consensus 77 GG~~vis~pp~ 87 (294)
||.|+++..+.
T Consensus 156 gG~l~i~~~~~ 166 (201)
T 2ift_A 156 NALIYVETEKD 166 (201)
T ss_dssp EEEEEEEEESS
T ss_pred CcEEEEEECCC
Confidence 99999987543
No 119
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.98 E-value=1.7e-05 Score=69.64 Aligned_cols=71 Identities=11% Similarity=0.043 Sum_probs=58.5
Q ss_pred eeccCCCcHHHHHHHHHc-----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER-----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er-----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+|+.+++.|+++ +. .+.+...|....++++++||+|++. . .++..++.++.|+|||||++++
T Consensus 123 ~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~-----~-~~~~~~l~~~~~~L~~gG~l~~ 196 (258)
T 2pwy_A 123 LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD-----L-MEPWKVLEKAALALKPDRFLVA 196 (258)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE-----S-SCGGGGHHHHHHHEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC-----C-cCHHHHHHHHHHhCCCCCEEEE
Confidence 466779999999999876 53 4667778888888999999999973 2 3455899999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
..+
T Consensus 197 ~~~ 199 (258)
T 2pwy_A 197 YLP 199 (258)
T ss_dssp EES
T ss_pred EeC
Confidence 886
No 120
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.98 E-value=1.7e-05 Score=73.48 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=56.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCC-CCCCcccEEEecCcCcccccC-hHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLP-YPSRSFDVAHCSRCLVPWTSY-DGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LP-fpd~sFD~V~~s~~l~h~~~d-~~~~L~Ei~RVLKPGG~~ 80 (294)
.+...|+ +.+++.|+++ ++ .+.+...|....+ +..+.||+|++..++|||.++ ...+|+++.|+|||||+|
T Consensus 205 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l 283 (352)
T 3mcz_A 205 TGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGAL 283 (352)
T ss_dssp EEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEE
T ss_pred eEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3445688 6788888764 43 3667777766665 245669999999999777543 257999999999999999
Q ss_pred EEEc
Q 041513 81 VVSG 84 (294)
Q Consensus 81 vis~ 84 (294)
++..
T Consensus 284 ~i~e 287 (352)
T 3mcz_A 284 LILT 287 (352)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9976
No 121
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.98 E-value=4.9e-06 Score=72.16 Aligned_cols=71 Identities=10% Similarity=-0.012 Sum_probs=55.9
Q ss_pred eeccCCCcHHHHHHHHHcCC---CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGL---PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv---~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+...|+|+.|++.|+++.. .+.+...+......++++||+|++..+++|+. .++.|+|||||+++++.+
T Consensus 94 ~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 94 KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPTLL-------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEEC
T ss_pred EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHHHH-------HHHHHHcCCCcEEEEEEc
Confidence 46678999999999988632 56677777665333578999999999996543 479999999999999986
Q ss_pred C
Q 041513 86 P 86 (294)
Q Consensus 86 p 86 (294)
+
T Consensus 167 ~ 167 (231)
T 1vbf_A 167 V 167 (231)
T ss_dssp S
T ss_pred C
Confidence 4
No 122
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.97 E-value=7.4e-06 Score=76.49 Aligned_cols=73 Identities=16% Similarity=0.235 Sum_probs=59.0
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccC-hHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY-DGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d-~~~~L~Ei~RVLKPGG~~v 81 (294)
.+...|+ +.|++.|+++ ++ .+.+...|....|+++. |+|++..+++||.++ ...+|+++.|+|||||+++
T Consensus 216 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~ 292 (359)
T 1x19_A 216 DSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLL 292 (359)
T ss_dssp EEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEE
T ss_pred eEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 4556689 8999999875 44 26777788887788765 999999999777542 4579999999999999998
Q ss_pred EEc
Q 041513 82 VSG 84 (294)
Q Consensus 82 is~ 84 (294)
+..
T Consensus 293 i~e 295 (359)
T 1x19_A 293 ILD 295 (359)
T ss_dssp EEE
T ss_pred EEe
Confidence 876
No 123
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.95 E-value=2.1e-05 Score=70.78 Aligned_cols=71 Identities=10% Similarity=0.122 Sum_probs=57.1
Q ss_pred eeccCCCcHHHHHHHHHc-----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER-----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er-----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+++.+++.|+++ +. .+.+...|... ++++++||+|++ |. .++..+++++.|+|||||++++
T Consensus 137 ~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~-----~~-~~~~~~l~~~~~~LkpgG~l~i 209 (275)
T 1yb2_A 137 TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIA-----DI-PDPWNHVQKIASMMKPGSVATF 209 (275)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEE-----CC-SCGGGSHHHHHHTEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEE-----cC-cCHHHHHHHHHHHcCCCCEEEE
Confidence 566779999999999875 43 36666677666 788889999998 22 3555899999999999999999
Q ss_pred EcCC
Q 041513 83 SGPP 86 (294)
Q Consensus 83 s~pp 86 (294)
+.+.
T Consensus 210 ~~~~ 213 (275)
T 1yb2_A 210 YLPN 213 (275)
T ss_dssp EESS
T ss_pred EeCC
Confidence 9863
No 124
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.95 E-value=1.1e-05 Score=72.20 Aligned_cols=72 Identities=17% Similarity=0.048 Sum_probs=56.7
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCC---CCcccEEEecCcCcccccChHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYP---SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfp---d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
.+...|+|+.|+++|+++ ++ ++.+..++++.++.. +++||+|+|..+- +...++.++.|+|||||+|
T Consensus 106 ~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~~-----~~~~ll~~~~~~LkpgG~l 180 (249)
T 3g89_A 106 ELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVA-----PLCVLSELLLPFLEVGGAA 180 (249)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESSC-----CHHHHHHHHGGGEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCcC-----CHHHHHHHHHHHcCCCeEE
Confidence 466789999999999874 55 467777888777754 5899999986432 4458999999999999999
Q ss_pred EEEcC
Q 041513 81 VVSGP 85 (294)
Q Consensus 81 vis~p 85 (294)
++...
T Consensus 181 ~~~~g 185 (249)
T 3g89_A 181 VAMKG 185 (249)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 88553
No 125
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.92 E-value=6.1e-06 Score=77.31 Aligned_cols=72 Identities=18% Similarity=0.108 Sum_probs=56.4
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecC---cCcccccChHHHHHHHHhccCCCcE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSR---CLVPWTSYDGLYLMEIDRVLRPGGY 79 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~---~l~h~~~d~~~~L~Ei~RVLKPGG~ 79 (294)
.+.+.|+|+ |++.|+++ ++ .+.+..++.+.+++++++||+|++.. ++ +...+...++.++.|+|||||.
T Consensus 89 ~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~ 166 (340)
T 2fyt_A 89 KVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFL-LFESMLDSVLYAKNKYLAKGGS 166 (340)
T ss_dssp EEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTB-TTTCHHHHHHHHHHHHEEEEEE
T ss_pred EEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhc-cCHHHHHHHHHHHHhhcCCCcE
Confidence 456678896 99988764 33 46777788999999999999999876 34 3334455799999999999999
Q ss_pred EEE
Q 041513 80 WVV 82 (294)
Q Consensus 80 ~vi 82 (294)
++.
T Consensus 167 lip 169 (340)
T 2fyt_A 167 VYP 169 (340)
T ss_dssp EES
T ss_pred EEc
Confidence 983
No 126
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.92 E-value=1.3e-05 Score=70.15 Aligned_cols=68 Identities=12% Similarity=0.096 Sum_probs=53.3
Q ss_pred eeccCCCcHHHHHHHHHcC---CCcEEEEccCCC----CCCCCCcccEEEecCcCcccccCh---HHHHHHHHhccCCCc
Q 041513 9 SFAPLDVHEAQVQFALERG---LPAMVGLLSTYQ----LPYPSRSFDVAHCSRCLVPWTSYD---GLYLMEIDRVLRPGG 78 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---v~~~~~v~d~~~----LPfpd~sFD~V~~s~~l~h~~~d~---~~~L~Ei~RVLKPGG 78 (294)
.+.+.|+|+.|++.|+++. ..+.+...++.. ++++ ++||+|++ + ..++ ..+++++.|+|||||
T Consensus 100 ~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~-----~-~~~~~~~~~~l~~~~~~LkpgG 172 (230)
T 1fbn_A 100 IVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYE-----D-VAQPNQAEILIKNAKWFLKKGG 172 (230)
T ss_dssp EEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEE-----C-CCSTTHHHHHHHHHHHHEEEEE
T ss_pred EEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEE-----e-cCChhHHHHHHHHHHHhCCCCc
Confidence 4667899999999998753 245666777777 7887 88999982 2 2333 568999999999999
Q ss_pred EEEEE
Q 041513 79 YWVVS 83 (294)
Q Consensus 79 ~~vis 83 (294)
+++++
T Consensus 173 ~l~i~ 177 (230)
T 1fbn_A 173 YGMIA 177 (230)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99997
No 127
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.91 E-value=8.8e-06 Score=74.89 Aligned_cols=74 Identities=18% Similarity=-0.017 Sum_probs=57.3
Q ss_pred eeccCCCcHHHHHHHHHcC------CCcEEEEccCCCCCCCCCcccEEEecCcCcccccCh-HHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALERG------LPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD-GLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg------v~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~-~~~L~Ei~RVLKPGG~~v 81 (294)
.+...|+ +.|++.|+++- -.+.+...|... +++ +.||+|++..+++||.++. ..+++++.|+|||||+++
T Consensus 193 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~ 269 (334)
T 2ip2_A 193 RGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVV 269 (334)
T ss_dssp EEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred EEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 4566788 88888887752 246677777655 666 6799999999997775332 379999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+...
T Consensus 270 i~e~ 273 (334)
T 2ip2_A 270 VIER 273 (334)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9864
No 128
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.90 E-value=3.7e-05 Score=63.20 Aligned_cols=69 Identities=7% Similarity=-0.027 Sum_probs=56.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ ++ .+.+...+... ++++++||+|++..+ .+...+++++.|+ |||+++++
T Consensus 59 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~ 130 (183)
T 2yxd_A 59 FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVAN 130 (183)
T ss_dssp EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEE
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEE
Confidence 566789999999999875 43 46666777665 788889999999877 4566899999999 99999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
.+
T Consensus 131 ~~ 132 (183)
T 2yxd_A 131 TI 132 (183)
T ss_dssp ES
T ss_pred ec
Confidence 75
No 129
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.89 E-value=1.1e-05 Score=72.55 Aligned_cols=72 Identities=11% Similarity=0.005 Sum_probs=54.4
Q ss_pred eccCCCcHHHHHHHHHcC--C-CcEEEEcc---CCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 10 FAPLDVHEAQVQFALERG--L-PAMVGLLS---TYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~erg--v-~~~~~v~d---~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
+.+.|+|+.|++.|+++. . ++.....+ .+..++..++||+|++.... ..+...++.|+.|+|||||+++++
T Consensus 105 V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~---~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 105 IYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQ---PEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEeccC---ChhHHHHHHHHHHhccCCCEEEEE
Confidence 556799999999998753 2 34444444 34567888999999876433 345668999999999999999997
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
.
T Consensus 182 i 182 (233)
T 4df3_A 182 I 182 (233)
T ss_dssp E
T ss_pred E
Confidence 5
No 130
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.87 E-value=1.9e-05 Score=65.35 Aligned_cols=72 Identities=17% Similarity=0.104 Sum_probs=55.9
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCC-CcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPS-RSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd-~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+...|+|+.+++.|+++ ++ .+.+...+... ++++ +.||+|++..++.| ...++.++.|+|+|||+++
T Consensus 57 ~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~----~~~~l~~~~~~l~~gG~l~ 131 (192)
T 1l3i_A 57 RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGSGGE----LQEILRIIKDKLKPGGRII 131 (192)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCCTTC----HHHHHHHHHHTEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCchHH----HHHHHHHHHHhcCCCcEEE
Confidence 566779999999999874 44 45566666544 4444 68999999988733 4589999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+..+
T Consensus 132 ~~~~ 135 (192)
T 1l3i_A 132 VTAI 135 (192)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9875
No 131
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.86 E-value=3.2e-05 Score=68.91 Aligned_cols=78 Identities=13% Similarity=0.129 Sum_probs=58.1
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCC--CCCCcccEEEecCcCccc----c---------------c
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLP--YPSRSFDVAHCSRCLVPW----T---------------S 61 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LP--fpd~sFD~V~~s~~l~h~----~---------------~ 61 (294)
.+.+.|+++.|++.|+++ ++. +.+..+|...++ +++++||+|+|.-.+.+. . .
T Consensus 74 ~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~ 153 (259)
T 3lpm_A 74 KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMC 153 (259)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC-----------------------H
T ss_pred cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccC
Confidence 577889999999999875 443 677777877665 668999999996444221 0 1
Q ss_pred ChHHHHHHHHhccCCCcEEEEEcCC
Q 041513 62 YDGLYLMEIDRVLRPGGYWVVSGPP 86 (294)
Q Consensus 62 d~~~~L~Ei~RVLKPGG~~vis~pp 86 (294)
+...++.++.|+|||||+|++..++
T Consensus 154 ~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 154 TLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHccCCcEEEEEEcH
Confidence 1246999999999999999997654
No 132
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.85 E-value=5.7e-07 Score=78.77 Aligned_cols=75 Identities=16% Similarity=0.163 Sum_probs=59.5
Q ss_pred eeeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 8 MSFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
..+.+.|+|+.|++.|+++ ++ .+.+.++|...++ ++++||+|++...++ +..+....+.++.|+|||||+++
T Consensus 101 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~-~~~~~~~~~~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 101 MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG-GPDYATAETFDIRTMMSPDGFEI 178 (241)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS-SGGGGGSSSBCTTTSCSSCHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC-CcchhhhHHHHHHhhcCCcceeH
Confidence 3567889999999999875 44 4677778877776 678999999998884 45555568889999999999977
Q ss_pred EEc
Q 041513 82 VSG 84 (294)
Q Consensus 82 is~ 84 (294)
+..
T Consensus 179 ~~~ 181 (241)
T 3gdh_A 179 FRL 181 (241)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 133
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.85 E-value=3.4e-05 Score=67.86 Aligned_cols=70 Identities=19% Similarity=0.352 Sum_probs=55.7
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+|+.+++.|+++ +++ +.+...|... ++++++||+|++.. .++..++.++.|+|||||++++
T Consensus 120 ~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~ 192 (255)
T 3mb5_A 120 RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE-GIEEENVDHVILDL------PQPERVVEHAAKALKPGGFFVA 192 (255)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG-CCCCCSEEEEEECS------SCGGGGHHHHHHHEEEEEEEEE
T ss_pred EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh-ccCCCCcCEEEECC------CCHHHHHHHHHHHcCCCCEEEE
Confidence 466779999999999876 543 5666677664 48889999999742 3455799999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
..+
T Consensus 193 ~~~ 195 (255)
T 3mb5_A 193 YTP 195 (255)
T ss_dssp EES
T ss_pred EEC
Confidence 876
No 134
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.84 E-value=2.5e-05 Score=65.35 Aligned_cols=71 Identities=11% Similarity=-0.040 Sum_probs=55.5
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccC--------hHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY--------DGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d--------~~~~L~Ei~RVLKPGG~~ 80 (294)
.+.+.|+|+.|++. ...+.+.++|... ++++++||+|+|+..+++..+. ...++.++.+.| |||.+
T Consensus 46 ~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l 119 (170)
T 3q87_B 46 TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGML 119 (170)
T ss_dssp EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEE
T ss_pred cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEE
Confidence 67788999999988 2345666778766 7888999999999888432222 247899999999 99999
Q ss_pred EEEcC
Q 041513 81 VVSGP 85 (294)
Q Consensus 81 vis~p 85 (294)
+++.+
T Consensus 120 ~~~~~ 124 (170)
T 3q87_B 120 YLLVI 124 (170)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
No 135
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.84 E-value=5.6e-06 Score=73.07 Aligned_cols=76 Identities=11% Similarity=0.087 Sum_probs=51.3
Q ss_pred eeeccCCCc-HHHHHHH---HHc----CC-CcEEEEccCCCCCCC-CCcccEEEecCcCc----ccccChHHHHHHHHhc
Q 041513 8 MSFAPLDVH-EAQVQFA---LER----GL-PAMVGLLSTYQLPYP-SRSFDVAHCSRCLV----PWTSYDGLYLMEIDRV 73 (294)
Q Consensus 8 ~s~ap~D~S-~~mlq~A---~er----gv-~~~~~v~d~~~LPfp-d~sFD~V~~s~~l~----h~~~d~~~~L~Ei~RV 73 (294)
..+.+.|+| +.|++.| +++ ++ ++.+.+++++.+|.. .+.||.|++.+... |...+...+|+|+.|+
T Consensus 49 ~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~ 128 (225)
T 3p2e_A 49 TFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADL 128 (225)
T ss_dssp EEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTT
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHh
Confidence 356788999 8888877 443 44 467777888888642 24555555544321 1222334789999999
Q ss_pred cCCCcEEEEE
Q 041513 74 LRPGGYWVVS 83 (294)
Q Consensus 74 LKPGG~~vis 83 (294)
|||||+|++.
T Consensus 129 LkpGG~l~i~ 138 (225)
T 3p2e_A 129 AKKEAHFEFV 138 (225)
T ss_dssp EEEEEEEEEE
T ss_pred cCCCcEEEEE
Confidence 9999999993
No 136
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.84 E-value=1.4e-05 Score=68.79 Aligned_cols=76 Identities=9% Similarity=-0.007 Sum_probs=58.9
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCC-CCCCCCcccEEEecCcCcccccChHHHHHHHHh--ccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDR--VLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~R--VLKPGG~~ 80 (294)
.+...|+|+.|++.|+++ ++ .+.+.+.|... +++++++||+|++...+ |. .....+++++.+ +|||||++
T Consensus 79 ~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~-~~-~~~~~~l~~l~~~~~L~pgG~l 156 (202)
T 2fpo_A 79 GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF-RR-GLLEETINLLEDNGWLADEALI 156 (202)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS-ST-TTHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC-CC-CcHHHHHHHHHhcCccCCCcEE
Confidence 567889999999999874 34 56677777655 67778899999998775 43 445578888865 69999999
Q ss_pred EEEcCC
Q 041513 81 VVSGPP 86 (294)
Q Consensus 81 vis~pp 86 (294)
+++..+
T Consensus 157 ~i~~~~ 162 (202)
T 2fpo_A 157 YVESEV 162 (202)
T ss_dssp EEEEEG
T ss_pred EEEECC
Confidence 998753
No 137
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.84 E-value=1.3e-05 Score=73.86 Aligned_cols=71 Identities=13% Similarity=0.044 Sum_probs=57.3
Q ss_pred eeccCCCcHHHHHHHHHc----CCC-cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP-AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~-~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|++|++.|+++ +++ +.+...|....+.++++||+|++..+++|.. .++.++|||||+++++
T Consensus 102 ~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 102 LVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVP 174 (317)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEE
Confidence 367789999999999875 443 6677778777666678999999999996543 5789999999999998
Q ss_pred cCC
Q 041513 84 GPP 86 (294)
Q Consensus 84 ~pp 86 (294)
..+
T Consensus 175 ~~~ 177 (317)
T 1dl5_A 175 INL 177 (317)
T ss_dssp BCB
T ss_pred ECC
Confidence 754
No 138
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.83 E-value=1.2e-05 Score=74.78 Aligned_cols=75 Identities=25% Similarity=0.315 Sum_probs=56.4
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccCh-HHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD-GLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~-~~~L~Ei~RVLKPGG~~v 81 (294)
.+...|+ +.|++.|+++ ++ .+.+...|... +++.+ ||+|++..+++||.+.. ..+++++.|+|||||+++
T Consensus 209 ~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~ 285 (360)
T 1tw3_A 209 SATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPRK-ADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRIL 285 (360)
T ss_dssp EEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSSC-EEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEE
T ss_pred EEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCCC-ccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 3445677 8899998764 34 46677777544 45544 99999999997775432 379999999999999999
Q ss_pred EEcCC
Q 041513 82 VSGPP 86 (294)
Q Consensus 82 is~pp 86 (294)
+..+.
T Consensus 286 i~e~~ 290 (360)
T 1tw3_A 286 IHERD 290 (360)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 98753
No 139
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.82 E-value=2.3e-05 Score=66.53 Aligned_cols=71 Identities=14% Similarity=0.065 Sum_probs=55.9
Q ss_pred eeccCCCcHHHHHHHHHc----CCC-cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP-AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~-~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.+++.|+++ +++ +.+...+...++ ++++||+|++.. + .+...++.++.++|||||++++.
T Consensus 91 ~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~-~----~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 91 HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA-F----ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC-S----SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec-c----CCHHHHHHHHHHhcCCCcEEEEE
Confidence 566789999999999874 443 667777777765 568999999753 2 34568999999999999999997
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
..
T Consensus 165 ~~ 166 (207)
T 1jsx_A 165 KG 166 (207)
T ss_dssp ES
T ss_pred eC
Confidence 54
No 140
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.82 E-value=4.6e-05 Score=68.45 Aligned_cols=76 Identities=9% Similarity=0.096 Sum_probs=55.5
Q ss_pred eeccCCCcHHHHHHHHHc----CCC-cEEEEccCCCCCCCCCcccEEEecCcCccc------------c-----------
Q 041513 9 SFAPLDVHEAQVQFALER----GLP-AMVGLLSTYQLPYPSRSFDVAHCSRCLVPW------------T----------- 60 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~-~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~------------~----------- 60 (294)
.+.+.|+|+.+++.|+++ +++ +.+.++|... ++++++||+|++...++.. .
T Consensus 135 ~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g 213 (276)
T 2b3t_A 135 EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSG 213 (276)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcH
Confidence 566779999999999875 443 6666666554 4557899999997433211 1
Q ss_pred -cChHHHHHHHHhccCCCcEEEEEcC
Q 041513 61 -SYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 61 -~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.....++.++.++|||||++++..+
T Consensus 214 ~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 214 MADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp THHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 1234688999999999999999764
No 141
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.81 E-value=6.2e-06 Score=77.58 Aligned_cols=70 Identities=13% Similarity=0.101 Sum_probs=55.2
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChH--HHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDG--LYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~--~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+...|+ +.|++.|++. ..+.+...|... ++|+ ||+|++..+++||. ++. .+|+++.|+|||||+|++..
T Consensus 235 ~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~-d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 235 KGINFDL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWS-DEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp EEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEeCh-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccCC-HHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3455688 8999888763 246677777666 7775 99999999996664 444 79999999999999999985
No 142
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.81 E-value=4.1e-05 Score=72.85 Aligned_cols=106 Identities=10% Similarity=0.022 Sum_probs=71.5
Q ss_pred eeccCCCcHHHHHHHHHc----CC----CcEEEEccCCCCCCCCCcccEEEecCcCccc--c-cC-hHHHHHHHHhccCC
Q 041513 9 SFAPLDVHEAQVQFALER----GL----PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPW--T-SY-DGLYLMEIDRVLRP 76 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv----~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~--~-~d-~~~~L~Ei~RVLKP 76 (294)
.+.+.|+|+.|++.|+++ ++ .+.+...|... ++++++||+|+|...+++. . .. ...+++++.|+|||
T Consensus 248 ~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkp 326 (375)
T 4dcm_A 248 KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI 326 (375)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEE
T ss_pred EEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCC
Confidence 567789999999999874 33 35566677665 6788999999999888432 1 11 12589999999999
Q ss_pred CcEEEEEcCCCCccccCCCcccChHHHHHHHHHHHHHHHhhceEeeecccceeEeeC
Q 041513 77 GGYWVVSGPPISWKTSYRGWERDAKDLQKEQISLENLATRLCWKKIAERGPIAVWRK 133 (294)
Q Consensus 77 GG~~vis~pp~~~~~~~~~w~~~~e~l~~~~~~le~l~~~lcW~~v~~~~~~~iw~K 133 (294)
||+++++.+... ++ ...++++.. ..+.+++.....|.+-
T Consensus 327 gG~l~iv~n~~~------~~----------~~~l~~~fg--~~~~~a~~~~F~V~~~ 365 (375)
T 4dcm_A 327 NGELYIVANRHL------DY----------FHKLKKIFG--NCTTIATNNKFVVLKA 365 (375)
T ss_dssp EEEEEEEEETTS------CH----------HHHHHHHHS--CCEEEEECSSEEEEEE
T ss_pred CcEEEEEEECCc------CH----------HHHHHHhcC--CEEEEeeCCCEEEEEE
Confidence 999999874211 11 123443333 4666777777766663
No 143
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.81 E-value=3.5e-05 Score=71.34 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=56.8
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEec------CcCcccccC---------------
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCS------RCLVPWTSY--------------- 62 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s------~~l~h~~~d--------------- 62 (294)
.+...|+|+.+++.|+++ |+ .+.+.+.|+..++..+++||+|++. .++.+ .++
T Consensus 145 ~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~-~p~~~~~~~~~~~~~~~~ 223 (315)
T 1ixk_A 145 VIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHK-NPERKWNRTMDDIKFCQG 223 (315)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC---------CCHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCCCcccccC-ChhHhhcCCHHHHHHHHH
Confidence 466789999999999875 55 4667777887777667889999973 22311 111
Q ss_pred -hHHHHHHHHhccCCCcEEEEEcCC
Q 041513 63 -DGLYLMEIDRVLRPGGYWVVSGPP 86 (294)
Q Consensus 63 -~~~~L~Ei~RVLKPGG~~vis~pp 86 (294)
...+|.++.|+|||||++++++..
T Consensus 224 ~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 224 LQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 147899999999999999998753
No 144
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.80 E-value=3.6e-06 Score=68.43 Aligned_cols=56 Identities=18% Similarity=0.010 Sum_probs=45.4
Q ss_pred CcEEEEccCCCCC--------CCCCcccEEEecCcCcccccCh-----------HHHHHHHHhccCCCcEEEEEcC
Q 041513 29 PAMVGLLSTYQLP--------YPSRSFDVAHCSRCLVPWTSYD-----------GLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 29 ~~~~~v~d~~~LP--------fpd~sFD~V~~s~~l~h~~~d~-----------~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+...+...++ +++++||+|++...+ |+.... ..+++++.|+|||||.++++.+
T Consensus 63 ~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 63 GVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAP-NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp TEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEEcccccchhhhhhhccCCCCceeEEEECCCc-cccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 3556667877777 888999999998888 444443 5899999999999999999874
No 145
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.80 E-value=2.7e-05 Score=69.90 Aligned_cols=78 Identities=9% Similarity=-0.007 Sum_probs=58.2
Q ss_pred eeeccCCCcHHHHHHHHHcCCC---------cEEEEccCCCC-------CCCCCcccEEEecCcCc--------------
Q 041513 8 MSFAPLDVHEAQVQFALERGLP---------AMVGLLSTYQL-------PYPSRSFDVAHCSRCLV-------------- 57 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~ergv~---------~~~~v~d~~~L-------Pfpd~sFD~V~~s~~l~-------------- 57 (294)
..+.+.|+++.|++.|+++-.. +.+...|...+ ++++++||+|+|.--+.
T Consensus 61 ~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~ 140 (260)
T 2ozv_A 61 AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAE 140 (260)
T ss_dssp EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------
T ss_pred CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHH
Confidence 4677889999999999885321 56777787766 47789999999973321
Q ss_pred --cc-ccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 58 --PW-TSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 58 --h~-~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
|. ......+++++.++|||||+|++..+
T Consensus 141 a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 141 AHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp ------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 11 12345789999999999999999765
No 146
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.80 E-value=2.2e-05 Score=68.58 Aligned_cols=73 Identities=14% Similarity=0.093 Sum_probs=51.8
Q ss_pred eeccCCCcHHHHHH----HHHcCCCcEEEEccCCC---CCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQF----ALERGLPAMVGLLSTYQ---LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~----A~ergv~~~~~v~d~~~---LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+|+.|++. |+++ ..+.+..+|... +|+++++||+|++... ..+....++.++.|+|||||+++
T Consensus 104 ~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~ 179 (233)
T 2ipx_A 104 LVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADVA---QPDQTRIVALNAHTFLRNGGHFV 179 (233)
T ss_dssp EEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEE
Confidence 45677999776554 4443 356677777665 5677899999998644 11222346889999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
++..
T Consensus 180 i~~~ 183 (233)
T 2ipx_A 180 ISIK 183 (233)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9764
No 147
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.79 E-value=2e-05 Score=68.15 Aligned_cols=71 Identities=13% Similarity=0.093 Sum_probs=56.3
Q ss_pred eeccCCCcHHHHHHHHHc----CC------CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCc
Q 041513 9 SFAPLDVHEAQVQFALER----GL------PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGG 78 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv------~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG 78 (294)
.+...|+|+.+++.|+++ +. .+.+...+....+.+++.||+|++...+.+ ++.++.|+|||||
T Consensus 104 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~-------~~~~~~~~LkpgG 176 (226)
T 1i1n_A 104 KVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPV-------VPQALIDQLKPGG 176 (226)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSS-------CCHHHHHTEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEECCchHH-------HHHHHHHhcCCCc
Confidence 567789999999999864 21 466777777766667889999999988743 3468999999999
Q ss_pred EEEEEcCC
Q 041513 79 YWVVSGPP 86 (294)
Q Consensus 79 ~~vis~pp 86 (294)
+++++..+
T Consensus 177 ~lv~~~~~ 184 (226)
T 1i1n_A 177 RLILPVGP 184 (226)
T ss_dssp EEEEEESC
T ss_pred EEEEEEec
Confidence 99998764
No 148
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.78 E-value=1.3e-05 Score=75.67 Aligned_cols=72 Identities=14% Similarity=-0.002 Sum_probs=55.9
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccCh-HHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD-GLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~-~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+...|+ +.|++.|+++ ..+.+...|... |+|++ |+|++..++|||.++. ..+|+++.|+|||||++++...
T Consensus 229 ~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 229 NAINFDL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp EEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred EEEEEeh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 3455688 8888888654 246677777665 77765 9999999997776543 3689999999999999999764
No 149
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.78 E-value=0.00014 Score=64.58 Aligned_cols=74 Identities=20% Similarity=0.181 Sum_probs=55.1
Q ss_pred eeeccCCCcHHHHHHHHHc----CCC--cEEEEccCCC-CCCC--CCcccEEEecCcCcccccChHHHHHHHHhccCCCc
Q 041513 8 MSFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQ-LPYP--SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGG 78 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~-LPfp--d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG 78 (294)
..+...|+++.+++.|+++ ++. +.+.++++.. ++.. .++||+|++... ......++.++.|+|||||
T Consensus 89 ~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~~----~~~~~~~l~~~~~~LkpGG 164 (248)
T 3tfw_A 89 GQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDAD----KPNNPHYLRWALRYSRPGT 164 (248)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECSC----GGGHHHHHHHHHHTCCTTC
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECCc----hHHHHHHHHHHHHhcCCCe
Confidence 3567789999999999875 543 6677777544 4443 349999998643 2344479999999999999
Q ss_pred EEEEEcC
Q 041513 79 YWVVSGP 85 (294)
Q Consensus 79 ~~vis~p 85 (294)
++++...
T Consensus 165 ~lv~~~~ 171 (248)
T 3tfw_A 165 LIIGDNV 171 (248)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 9998653
No 150
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.76 E-value=1.9e-05 Score=67.64 Aligned_cols=70 Identities=13% Similarity=0.056 Sum_probs=53.9
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCC-CCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYP-SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfp-d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+|+.+++.|+++ ++ .+.+...+... +++ +++||+|++..+++|.. .++.|+|||||++++
T Consensus 104 ~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~lv~ 175 (215)
T 2yxe_A 104 LVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL-GYEPLAPYDRIYTTAAGPKIP-------EPLIRQLKDGGKLLM 175 (215)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG-CCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc-CCCCCCCeeEEEECCchHHHH-------HHHHHHcCCCcEEEE
Confidence 466779999999999875 43 35566666533 333 67899999999996543 489999999999999
Q ss_pred EcCC
Q 041513 83 SGPP 86 (294)
Q Consensus 83 s~pp 86 (294)
+.++
T Consensus 176 ~~~~ 179 (215)
T 2yxe_A 176 PVGR 179 (215)
T ss_dssp EESS
T ss_pred EECC
Confidence 8864
No 151
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.76 E-value=1.3e-05 Score=76.03 Aligned_cols=73 Identities=19% Similarity=0.089 Sum_probs=57.7
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCCCCCCcccEEEecCcCcccc---cChHHHHHHHHhccCCCcE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT---SYDGLYLMEIDRVLRPGGY 79 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~---~d~~~~L~Ei~RVLKPGG~ 79 (294)
.+.+.|+| .|++.|+++ ++. +.+..++.+.++++ ++||+|+|.... |+. .....++.++.|+|||||+
T Consensus 88 ~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~-~~l~~e~~~~~~l~~~~~~LkpgG~ 164 (376)
T 3r0q_C 88 KVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMG-YFLLRESMFDSVISARDRWLKPTGV 164 (376)
T ss_dssp EEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCB-TTBTTTCTHHHHHHHHHHHEEEEEE
T ss_pred EEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChh-hcccchHHHHHHHHHHHhhCCCCeE
Confidence 46677999 899998764 443 67788889999888 899999996644 332 4466799999999999999
Q ss_pred EEEEc
Q 041513 80 WVVSG 84 (294)
Q Consensus 80 ~vis~ 84 (294)
|+++.
T Consensus 165 li~~~ 169 (376)
T 3r0q_C 165 MYPSH 169 (376)
T ss_dssp EESSE
T ss_pred EEEec
Confidence 98865
No 152
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.75 E-value=1.4e-05 Score=74.45 Aligned_cols=71 Identities=13% Similarity=0.040 Sum_probs=56.2
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChH--HHHHHHHhccCC---CcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDG--LYLMEIDRVLRP---GGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~--~~L~Ei~RVLKP---GG~~vis 83 (294)
.+...|+ +.|++.|++.. .+.+...|... ++|+ ||+|++..++|||. ++. .+|+++.|+||| ||++++.
T Consensus 214 ~~~~~D~-~~~~~~a~~~~-~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~-d~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 214 KCIVFDR-PQVVENLSGSN-NLTYVGGDMFT-SIPN--ADAVLLKYILHNWT-DKDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp EEEEEEC-HHHHTTCCCBT-TEEEEECCTTT-CCCC--CSEEEEESCGGGSC-HHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred eEEEeeC-HHHHhhcccCC-CcEEEeccccC-CCCC--ccEEEeehhhccCC-HHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 4667799 89999887642 36676777654 6664 99999999997774 444 799999999999 9999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
..
T Consensus 288 e~ 289 (352)
T 1fp2_A 288 DM 289 (352)
T ss_dssp EC
T ss_pred Ee
Confidence 74
No 153
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.73 E-value=5.6e-06 Score=67.75 Aligned_cols=74 Identities=23% Similarity=0.254 Sum_probs=55.4
Q ss_pred eccCCCcHHHHHHHHHc----CCCcEEEEccCCC-CCC-C--CCcccEEEecCcCcccccChHHHHHHHH--hccCCCcE
Q 041513 10 FAPLDVHEAQVQFALER----GLPAMVGLLSTYQ-LPY-P--SRSFDVAHCSRCLVPWTSYDGLYLMEID--RVLRPGGY 79 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~-LPf-p--d~sFD~V~~s~~l~h~~~d~~~~L~Ei~--RVLKPGG~ 79 (294)
+.+.|+|+.|++.|+++ ++.+.+...|... ++. + +++||+|++...+ | ......++++. |+|||||.
T Consensus 66 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~-~--~~~~~~~~~~~~~~~L~~gG~ 142 (171)
T 1ws6_A 66 AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY-A--MDLAALFGELLASGLVEAGGL 142 (171)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT-T--SCTTHHHHHHHHHTCEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC-c--hhHHHHHHHHHhhcccCCCcE
Confidence 67789999999999874 3456777677554 332 1 3489999999777 3 34447778887 99999999
Q ss_pred EEEEcCC
Q 041513 80 WVVSGPP 86 (294)
Q Consensus 80 ~vis~pp 86 (294)
++++.++
T Consensus 143 ~~~~~~~ 149 (171)
T 1ws6_A 143 YVLQHPK 149 (171)
T ss_dssp EEEEEET
T ss_pred EEEEeCC
Confidence 9998754
No 154
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.72 E-value=5.8e-05 Score=65.71 Aligned_cols=71 Identities=15% Similarity=0.061 Sum_probs=55.7
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+++.+++.|+++ ++ .+.+...+.....++++.||+|++.. .++..++.++.++|||||++++
T Consensus 115 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~ 188 (248)
T 2yvl_A 115 EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV------REPWHYLEKVHKSLMEGAPVGF 188 (248)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS------SCGGGGHHHHHHHBCTTCEEEE
T ss_pred EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC------cCHHHHHHHHHHHcCCCCEEEE
Confidence 566789999999999875 43 35566667666444778999999731 2455899999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
..+
T Consensus 189 ~~~ 191 (248)
T 2yvl_A 189 LLP 191 (248)
T ss_dssp EES
T ss_pred EeC
Confidence 886
No 155
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.72 E-value=1.8e-05 Score=74.58 Aligned_cols=71 Identities=15% Similarity=0.033 Sum_probs=55.8
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccC-hHHHHHHHHhccCCCcEEEEEcC
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY-DGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d-~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
+...|+ +.|++.|+++ ..+.+...|... |+|++ |+|++..++|||.++ ...+|+++.|+|||||+|++...
T Consensus 228 ~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 228 GVNFDL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp EEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred EEEecC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 445688 7888887654 356777778766 88865 999999999777643 34799999999999999999764
No 156
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.71 E-value=1.2e-05 Score=66.79 Aligned_cols=75 Identities=11% Similarity=-0.023 Sum_probs=56.4
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCC----CCCCCCcccEEEecCcCcccccChHHHHHHH--HhccCC
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQ----LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEI--DRVLRP 76 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~----LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei--~RVLKP 76 (294)
.+.+.|+|+.|++.|+++ ++ .+.+..+|... +++++++||+|++...+ + .......+.++ .|+|||
T Consensus 69 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~-~-~~~~~~~~~~l~~~~~L~~ 146 (187)
T 2fhp_A 69 KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPY-A-KQEIVSQLEKMLERQLLTN 146 (187)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCG-G-GCCHHHHHHHHHHTTCEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCC-C-chhHHHHHHHHHHhcccCC
Confidence 567789999999999874 33 35676777544 23447899999998775 3 23455778888 999999
Q ss_pred CcEEEEEcC
Q 041513 77 GGYWVVSGP 85 (294)
Q Consensus 77 GG~~vis~p 85 (294)
||.+++..+
T Consensus 147 gG~l~~~~~ 155 (187)
T 2fhp_A 147 EAVIVCETD 155 (187)
T ss_dssp EEEEEEEEE
T ss_pred CCEEEEEeC
Confidence 999999874
No 157
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.70 E-value=2.7e-05 Score=67.67 Aligned_cols=69 Identities=13% Similarity=0.110 Sum_probs=54.3
Q ss_pred eeccCCCcHHHHHHHHHcC----------CCcEEEEccCCCCCCCC-CcccEEEecCcCcccccChHHHHHHHHhccCCC
Q 041513 9 SFAPLDVHEAQVQFALERG----------LPAMVGLLSTYQLPYPS-RSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPG 77 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----------v~~~~~v~d~~~LPfpd-~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPG 77 (294)
.+...|+++++++.|+++. ..+.+...|... ++++ +.||+|++..+++|. +.++.++||||
T Consensus 116 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~-------~~~~~~~Lkpg 187 (227)
T 1r18_A 116 RIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDT-------PTELINQLASG 187 (227)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCSEEEEEECSCBSSC-------CHHHHHTEEEE
T ss_pred EEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCCccEEEECCchHHH-------HHHHHHHhcCC
Confidence 5677899999999998752 245666677655 5665 889999999988543 37899999999
Q ss_pred cEEEEEcC
Q 041513 78 GYWVVSGP 85 (294)
Q Consensus 78 G~~vis~p 85 (294)
|++++...
T Consensus 188 G~lvi~~~ 195 (227)
T 1r18_A 188 GRLIVPVG 195 (227)
T ss_dssp EEEEEEES
T ss_pred CEEEEEEe
Confidence 99999875
No 158
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.70 E-value=3.6e-05 Score=71.52 Aligned_cols=73 Identities=16% Similarity=0.106 Sum_probs=56.1
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcc--cccChHHHHHHHHhccCCCcEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVP--WTSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h--~~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
.+.+.|+| .|++.|+++ ++ .+.+..++.+.+++++++||+|+|....++ .......++.++.|+|||||++
T Consensus 63 ~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 141 (328)
T 1g6q_1 63 HVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLI 141 (328)
T ss_dssp EEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEE
T ss_pred EEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEE
Confidence 45667888 588888764 44 366777889999999899999998754322 3345567999999999999999
Q ss_pred EE
Q 041513 81 VV 82 (294)
Q Consensus 81 vi 82 (294)
+.
T Consensus 142 i~ 143 (328)
T 1g6q_1 142 FP 143 (328)
T ss_dssp ES
T ss_pred EE
Confidence 84
No 159
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.70 E-value=3.5e-05 Score=70.96 Aligned_cols=76 Identities=16% Similarity=0.216 Sum_probs=55.4
Q ss_pred eeccCCCcHHHHHHHHHcC---------CCcEEEEccCCCCCC--CCCcccEEEecCcCcccccCh----HHHHHHHHhc
Q 041513 9 SFAPLDVHEAQVQFALERG---------LPAMVGLLSTYQLPY--PSRSFDVAHCSRCLVPWTSYD----GLYLMEIDRV 73 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---------v~~~~~v~d~~~LPf--pd~sFD~V~~s~~l~h~~~d~----~~~L~Ei~RV 73 (294)
.+...|+++.+++.|+++. ..+.+.+.|...++. ++++||+|++.... ++.... ..+++++.|+
T Consensus 121 ~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~-~~~~~~~l~~~~~l~~~~~~ 199 (304)
T 3bwc_A 121 HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTD-PAGPASKLFGEAFYKDVLRI 199 (304)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC----------CCHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEECCCC-ccccchhhhHHHHHHHHHHh
Confidence 5667799999999998753 246677777666554 47899999997665 332221 4799999999
Q ss_pred cCCCcEEEEEcC
Q 041513 74 LRPGGYWVVSGP 85 (294)
Q Consensus 74 LKPGG~~vis~p 85 (294)
|||||.|++...
T Consensus 200 LkpgG~lv~~~~ 211 (304)
T 3bwc_A 200 LKPDGICCNQGE 211 (304)
T ss_dssp EEEEEEEEEEEC
T ss_pred cCCCcEEEEecC
Confidence 999999999764
No 160
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.69 E-value=8.2e-05 Score=70.27 Aligned_cols=75 Identities=15% Similarity=0.027 Sum_probs=57.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCC-CCC-CCCcccEEEecCcCcccccChHHHHHHHHhccCCCcE-E
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQ-LPY-PSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGY-W 80 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~-LPf-pd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~-~ 80 (294)
.+...|+|+.|++.|+++ |+ .+.+..+|... +|. .+++||+|++...+++. . ...++.++.|+|||||+ +
T Consensus 197 ~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~-~-~~~~l~~~~~~LkpgG~~~ 274 (373)
T 2qm3_A 197 RIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLE-A-IRAFVGRGIATLKGPRCAG 274 (373)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHH-H-HHHHHHHHHHTBCSTTCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchH-H-HHHHHHHHHHHcccCCeEE
Confidence 566789999999999875 55 56777788777 775 46799999998766332 2 45899999999999994 4
Q ss_pred EEEcC
Q 041513 81 VVSGP 85 (294)
Q Consensus 81 vis~p 85 (294)
+++..
T Consensus 275 ~~~~~ 279 (373)
T 2qm3_A 275 YFGIT 279 (373)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66553
No 161
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.68 E-value=8.8e-06 Score=67.62 Aligned_cols=75 Identities=5% Similarity=-0.047 Sum_probs=55.8
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCC-CCCCCCcccEEEecCcCcccccChHHHHHHHH--hccCCCcE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEID--RVLRPGGY 79 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~--RVLKPGG~ 79 (294)
.+.+.|+|+.|++.|+++ ++. +.+...|... ++..++.||+|++...+ +. ......+.++. |+|||||.
T Consensus 56 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~-~~-~~~~~~~~~l~~~~~L~~gG~ 133 (177)
T 2esr_A 56 AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY-AK-ETIVATIEALAAKNLLSEQVM 133 (177)
T ss_dssp EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS-HH-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC-Cc-chHHHHHHHHHhCCCcCCCcE
Confidence 567789999999999874 332 5666677554 45556789999998766 32 23346777777 99999999
Q ss_pred EEEEcC
Q 041513 80 WVVSGP 85 (294)
Q Consensus 80 ~vis~p 85 (294)
+++..+
T Consensus 134 l~~~~~ 139 (177)
T 2esr_A 134 VVCETD 139 (177)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999874
No 162
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.68 E-value=8.9e-06 Score=68.74 Aligned_cols=77 Identities=10% Similarity=-0.032 Sum_probs=42.0
Q ss_pred eeeccCCCcHHHHHHHHHcC----CCcEEEEccCCCCCCCC-----CcccEEEecCcCcccc------cC----------
Q 041513 8 MSFAPLDVHEAQVQFALERG----LPAMVGLLSTYQLPYPS-----RSFDVAHCSRCLVPWT------SY---------- 62 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~erg----v~~~~~v~d~~~LPfpd-----~sFD~V~~s~~l~h~~------~d---------- 62 (294)
..+.+.|+|+.|++.|+++. ..+.+.++|... ++++ ++||+|+|...+++.. ..
T Consensus 55 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~ 133 (215)
T 4dzr_A 55 VSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLAL 133 (215)
T ss_dssp EEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC--------------------
T ss_pred CeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccc
Confidence 36778899999999998753 234455556555 6776 9999999965442211 10
Q ss_pred ---------hHHHHHHHHhccCCCcE-EEEEcC
Q 041513 63 ---------DGLYLMEIDRVLRPGGY-WVVSGP 85 (294)
Q Consensus 63 ---------~~~~L~Ei~RVLKPGG~-~vis~p 85 (294)
...+++++.|+|||||+ +++..+
T Consensus 134 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 134 DGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp ----CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred cCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 04788999999999999 555443
No 163
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.68 E-value=3.8e-05 Score=67.82 Aligned_cols=79 Identities=15% Similarity=0.066 Sum_probs=55.9
Q ss_pred eeeeccCCCcHHHHHHHHHc-------CC--C-------------------------cE-------------EEEccCCC
Q 041513 7 TMSFAPLDVHEAQVQFALER-------GL--P-------------------------AM-------------VGLLSTYQ 39 (294)
Q Consensus 7 t~s~ap~D~S~~mlq~A~er-------gv--~-------------------------~~-------------~~v~d~~~ 39 (294)
...+.+.|+|+.|++.|+++ ++ . +. +.+.|...
T Consensus 77 ~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~ 156 (250)
T 1o9g_A 77 LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFD 156 (250)
T ss_dssp EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTC
T ss_pred CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhhhhhhhhccccccccccceeeccccc
Confidence 34678899999999999853 11 1 33 66677554
Q ss_pred CCC-----CCCcccEEEecCcCccccc--------ChHHHHHHHHhccCCCcEEEEEcC
Q 041513 40 LPY-----PSRSFDVAHCSRCLVPWTS--------YDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 40 LPf-----pd~sFD~V~~s~~l~h~~~--------d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
... +.+.||+|+|...+++... ....+++++.|+|||||+++++.+
T Consensus 157 ~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 157 PRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp GGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred ccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 221 4458999999866543322 223799999999999999999654
No 164
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.67 E-value=4.6e-05 Score=69.07 Aligned_cols=70 Identities=7% Similarity=0.042 Sum_probs=56.3
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|++.|+++ ++. +.+.++|+..++. +++||+|++... .....++.++.|+|||||+|++
T Consensus 150 ~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-----~~~~~~l~~~~~~LkpgG~l~~ 223 (278)
T 2frn_A 150 KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHY 223 (278)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-----hhHHHHHHHHHHHCCCCeEEEE
Confidence 467789999999999874 453 5677788888776 789999998533 2334799999999999999999
Q ss_pred Ec
Q 041513 83 SG 84 (294)
Q Consensus 83 s~ 84 (294)
..
T Consensus 224 ~~ 225 (278)
T 2frn_A 224 HN 225 (278)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 165
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.67 E-value=6.7e-05 Score=70.08 Aligned_cols=77 Identities=18% Similarity=0.028 Sum_probs=59.9
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCccccc-------ChHHHHHHHHhccCC
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTS-------YDGLYLMEIDRVLRP 76 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~-------d~~~~L~Ei~RVLKP 76 (294)
.+.+.|+++.|++.|+++ |+ .+.+.+.|+..++.+.+.||+|+|.--+..... ....+++++.|+|||
T Consensus 230 ~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkp 309 (354)
T 3tma_A 230 PVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPP 309 (354)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCC
Confidence 466789999999999875 45 477888999999988889999999543311111 124689999999999
Q ss_pred CcEEEEEcC
Q 041513 77 GGYWVVSGP 85 (294)
Q Consensus 77 GG~~vis~p 85 (294)
||++++..+
T Consensus 310 gG~l~i~t~ 318 (354)
T 3tma_A 310 GGRVALLTL 318 (354)
T ss_dssp TCEEEEEES
T ss_pred CcEEEEEeC
Confidence 999999875
No 166
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.67 E-value=2.5e-05 Score=67.68 Aligned_cols=74 Identities=14% Similarity=0.199 Sum_probs=53.7
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCC-CCCCC-----CcccEEEecCcCcccccChHHHHHHHHhccCC
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQ-LPYPS-----RSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRP 76 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~-LPfpd-----~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKP 76 (294)
.+...|+++.|++.|+++ ++. +.+.++++.. ++... ++||+|++....+++. +...++.++ |+|||
T Consensus 85 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~-~~~~~~~~~-~~Lkp 162 (221)
T 3u81_A 85 RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYL-PDTLLLEKC-GLLRK 162 (221)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHH-HHHHHHHHT-TCCCT
T ss_pred EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccch-HHHHHHHhc-cccCC
Confidence 466779999999999874 442 6676777433 44322 7999999987774443 333577777 99999
Q ss_pred CcEEEEEc
Q 041513 77 GGYWVVSG 84 (294)
Q Consensus 77 GG~~vis~ 84 (294)
||+|++..
T Consensus 163 gG~lv~~~ 170 (221)
T 3u81_A 163 GTVLLADN 170 (221)
T ss_dssp TCEEEESC
T ss_pred CeEEEEeC
Confidence 99998865
No 167
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.66 E-value=5.1e-05 Score=67.00 Aligned_cols=76 Identities=16% Similarity=0.162 Sum_probs=55.8
Q ss_pred eeccCCCcHHHHHHHHHc------------CC-CcEEEEccCCC-CC--CCCCcccEEEecCcCcccccC--------hH
Q 041513 9 SFAPLDVHEAQVQFALER------------GL-PAMVGLLSTYQ-LP--YPSRSFDVAHCSRCLVPWTSY--------DG 64 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er------------gv-~~~~~v~d~~~-LP--fpd~sFD~V~~s~~l~h~~~d--------~~ 64 (294)
.+.+.|+|+.|++.|+++ ++ ++.+..+|+.. ++ |++++||.|+..+.- .|... ..
T Consensus 75 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~-p~~k~~~~~~r~~~~ 153 (246)
T 2vdv_E 75 LILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCFPD-PHFKQRKHKARIITN 153 (246)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEEEEEESCC-CC------CSSCCCH
T ss_pred CEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCEEEEECCC-cccccchhHHhhccH
Confidence 567789999999999763 54 46677778665 77 889999999854322 12100 03
Q ss_pred HHHHHHHhccCCCcEEEEEcC
Q 041513 65 LYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 65 ~~L~Ei~RVLKPGG~~vis~p 85 (294)
.++.++.|+|||||+|++...
T Consensus 154 ~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 154 TLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp HHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHHcCCCCEEEEEec
Confidence 799999999999999999653
No 168
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.65 E-value=2.3e-05 Score=68.91 Aligned_cols=72 Identities=14% Similarity=0.111 Sum_probs=53.9
Q ss_pred eeccCCCcHHHHHHHHHc----CCC---cEEEEccCCC-CC-CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP---AMVGLLSTYQ-LP-YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGY 79 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~---~~~~v~d~~~-LP-fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~ 79 (294)
.+...|++++|++.|+++ ++. +.+.++++.. ++ +++++||+|++.... .+...++.++.|+|||||+
T Consensus 83 ~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~----~~~~~~l~~~~~~LkpGG~ 158 (221)
T 3dr5_A 83 TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVSP----MDLKALVDAAWPLLRRGGA 158 (221)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCCT----TTHHHHHHHHHHHEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCcH----HHHHHHHHHHHHHcCCCcE
Confidence 466779999999999874 444 5666666443 33 447899999987543 2344799999999999999
Q ss_pred EEEEc
Q 041513 80 WVVSG 84 (294)
Q Consensus 80 ~vis~ 84 (294)
+++..
T Consensus 159 lv~dn 163 (221)
T 3dr5_A 159 LVLAD 163 (221)
T ss_dssp EEETT
T ss_pred EEEeC
Confidence 99854
No 169
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.65 E-value=1.6e-05 Score=70.55 Aligned_cols=72 Identities=8% Similarity=0.025 Sum_probs=55.3
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCC---CCCCC-cccEEEecCcCcccccChHHHHHHHHh-ccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQL---PYPSR-SFDVAHCSRCLVPWTSYDGLYLMEIDR-VLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~L---Pfpd~-sFD~V~~s~~l~h~~~d~~~~L~Ei~R-VLKPGG~~vis 83 (294)
.+.+.|+|++|++.|+.....+.+.++|...+ ++.++ +||+|++... | .+...+|.|+.| +|||||+|++.
T Consensus 111 ~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~--~--~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 111 QVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA--H--ANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp EEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS--C--SSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred EEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc--h--HhHHHHHHHHHHhhCCCCCEEEEE
Confidence 56677899999888875444577777887763 65444 7999998654 3 255689999998 99999999996
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
.
T Consensus 187 d 187 (236)
T 2bm8_A 187 D 187 (236)
T ss_dssp S
T ss_pred e
Confidence 5
No 170
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.65 E-value=1.9e-05 Score=68.25 Aligned_cols=71 Identities=17% Similarity=0.144 Sum_probs=56.6
Q ss_pred eeccCCCcHHHHHHHHHc----C-----C-CcEEEEccCCCCC----CCCCcccEEEecCcCcccccChHHHHHHHHhcc
Q 041513 9 SFAPLDVHEAQVQFALER----G-----L-PAMVGLLSTYQLP----YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVL 74 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----g-----v-~~~~~v~d~~~LP----fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVL 74 (294)
.+...|+++.+++.|+++ + . .+.+...|....+ ++++.||+|++...++| ++.++.++|
T Consensus 111 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~-------~~~~~~~~L 183 (227)
T 2pbf_A 111 YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASE-------LPEILVDLL 183 (227)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSS-------CCHHHHHHE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHH-------HHHHHHHhc
Confidence 567789999999999875 3 2 4667777776665 66789999999988843 358899999
Q ss_pred CCCcEEEEEcCC
Q 041513 75 RPGGYWVVSGPP 86 (294)
Q Consensus 75 KPGG~~vis~pp 86 (294)
||||++++..++
T Consensus 184 kpgG~lv~~~~~ 195 (227)
T 2pbf_A 184 AENGKLIIPIEE 195 (227)
T ss_dssp EEEEEEEEEEEE
T ss_pred CCCcEEEEEEcc
Confidence 999999998753
No 171
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.62 E-value=6.1e-05 Score=70.12 Aligned_cols=73 Identities=23% Similarity=0.086 Sum_probs=50.9
Q ss_pred eeccCCCcHHHHHHHHH--cCC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccCh-HHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALE--RGL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD-GLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~e--rgv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~-~~~L~Ei~RVLKPGG~~vis 83 (294)
.+...|+++ ++..++. .+. .+.+...|.. .++| +||+|++..++|||.+.. ..+|+++.|+|||||+|++.
T Consensus 210 ~~~~~D~~~-~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~ 285 (348)
T 3lst_A 210 QGVLLDRAE-VVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVI 285 (348)
T ss_dssp EEEEEECHH-HHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEEEecCHH-HhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 345567754 4431111 122 3667777764 4555 899999999997776442 48999999999999999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
..
T Consensus 286 e~ 287 (348)
T 3lst_A 286 DA 287 (348)
T ss_dssp EC
T ss_pred Ee
Confidence 74
No 172
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.59 E-value=0.00013 Score=65.52 Aligned_cols=70 Identities=14% Similarity=0.177 Sum_probs=55.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+|+.+++.|+++ ++ .+.+...|.... +++++||+|++.. .++..++.++.++|||||.+++
T Consensus 139 ~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~------~~~~~~l~~~~~~L~pgG~l~~ 211 (277)
T 1o54_A 139 KVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDV------PDPWNYIDKCWEALKGGGRFAT 211 (277)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECC------SCGGGTHHHHHHHEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECC------cCHHHHHHHHHHHcCCCCEEEE
Confidence 566779999999999875 44 355666676655 7788999999732 3455899999999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
..+
T Consensus 212 ~~~ 214 (277)
T 1o54_A 212 VCP 214 (277)
T ss_dssp EES
T ss_pred EeC
Confidence 886
No 173
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.59 E-value=0.00018 Score=69.75 Aligned_cols=77 Identities=14% Similarity=0.116 Sum_probs=57.2
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCC--CCCCcccEEEe------cCcCcccccCh------------
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLP--YPSRSFDVAHC------SRCLVPWTSYD------------ 63 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LP--fpd~sFD~V~~------s~~l~h~~~d~------------ 63 (294)
.+...|+|+.+++.++++ |+ .+.+.+.|...++ +++++||+|++ ..++ +-.++.
T Consensus 286 ~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~-~~~pd~~~~~~~~~~~~l 364 (450)
T 2yxl_A 286 KIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTI-GKNPELRWRLREDKINEM 364 (450)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGT-TTSTTHHHHCCTTSHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeee-ccChhhhhhCCHHHHHHH
Confidence 466779999999999875 66 4666677877776 67789999995 2233 222221
Q ss_pred ----HHHHHHHHhccCCCcEEEEEcCC
Q 041513 64 ----GLYLMEIDRVLRPGGYWVVSGPP 86 (294)
Q Consensus 64 ----~~~L~Ei~RVLKPGG~~vis~pp 86 (294)
..+|.++.++|||||++++++-.
T Consensus 365 ~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 365 SQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 46899999999999999998753
No 174
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.59 E-value=7.8e-05 Score=68.94 Aligned_cols=71 Identities=14% Similarity=0.001 Sum_probs=50.6
Q ss_pred eeccCCCcHHHHHHHHHcC----------------CCcEEEEccCCCC--CCCCCcccEEEecCcCcccccChHHHHHHH
Q 041513 9 SFAPLDVHEAQVQFALERG----------------LPAMVGLLSTYQL--PYPSRSFDVAHCSRCLVPWTSYDGLYLMEI 70 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----------------v~~~~~v~d~~~L--Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei 70 (294)
.+...|+++.+++.|+++. ..+.+...|...+ ++++++||+|++... ++..++.++
T Consensus 132 ~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~------~~~~~l~~~ 205 (336)
T 2b25_A 132 RVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDML------NPHVTLPVF 205 (336)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECSS------STTTTHHHH
T ss_pred eEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECCC------CHHHHHHHH
Confidence 4566799999999998741 2466777787666 678889999998532 223589999
Q ss_pred HhccCCCcEEEEEcC
Q 041513 71 DRVLRPGGYWVVSGP 85 (294)
Q Consensus 71 ~RVLKPGG~~vis~p 85 (294)
.|+|||||.|++..+
T Consensus 206 ~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 206 YPHLKHGGVCAVYVV 220 (336)
T ss_dssp GGGEEEEEEEEEEES
T ss_pred HHhcCCCcEEEEEeC
Confidence 999999999998775
No 175
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.55 E-value=3e-05 Score=69.34 Aligned_cols=72 Identities=17% Similarity=0.129 Sum_probs=55.3
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.|+++.+++.|+++ ++.+.+...+... ++++++||+|++.... |. ...++.++.|+|||||++++++
T Consensus 144 ~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~-~~---~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 144 KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYA-EL---HAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCH-HH---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcH-HH---HHHHHHHHHHHcCCCCEEEEEe
Confidence 567789999999999874 4455666666443 2567899999987655 32 3479999999999999999987
Q ss_pred C
Q 041513 85 P 85 (294)
Q Consensus 85 p 85 (294)
.
T Consensus 219 ~ 219 (254)
T 2nxc_A 219 I 219 (254)
T ss_dssp E
T ss_pred e
Confidence 4
No 176
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.53 E-value=5.5e-05 Score=66.15 Aligned_cols=70 Identities=17% Similarity=0.212 Sum_probs=53.5
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCc-ccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRS-FDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~s-FD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+++.+++.|+++ ++ .+.+...+. ..+++++. ||+|++..++.++. .++.++|||||++++
T Consensus 116 ~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi 187 (235)
T 1jg1_A 116 DVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLII 187 (235)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEE
Confidence 466779999999999875 33 355656665 55666655 99999999885443 378999999999999
Q ss_pred EcCC
Q 041513 83 SGPP 86 (294)
Q Consensus 83 s~pp 86 (294)
+.++
T Consensus 188 ~~~~ 191 (235)
T 1jg1_A 188 PVGS 191 (235)
T ss_dssp EECS
T ss_pred EEec
Confidence 8864
No 177
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.51 E-value=6.1e-05 Score=66.05 Aligned_cols=73 Identities=8% Similarity=0.180 Sum_probs=55.8
Q ss_pred eeeccCCCcHHHHHHHHHc----CC--CcEEEEccCCC-CC-CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcE
Q 041513 8 MSFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQ-LP-YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGY 79 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~-LP-fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~ 79 (294)
..+...|+++.|++.|+++ ++ .+.+..+++.. ++ ..+++||+|++.... .....+++++.|+|||||+
T Consensus 96 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~----~~~~~~l~~~~~~LkpgG~ 171 (232)
T 3ntv_A 96 IHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAAK----AQSKKFFEIYTPLLKHQGL 171 (232)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETTS----SSHHHHHHHHGGGEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCcH----HHHHHHHHHHHHhcCCCeE
Confidence 3566789999999999874 44 46777777644 45 457899999976433 3445799999999999999
Q ss_pred EEEEc
Q 041513 80 WVVSG 84 (294)
Q Consensus 80 ~vis~ 84 (294)
|++..
T Consensus 172 lv~d~ 176 (232)
T 3ntv_A 172 VITDN 176 (232)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 98854
No 178
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.49 E-value=6.6e-05 Score=65.34 Aligned_cols=73 Identities=16% Similarity=0.160 Sum_probs=56.4
Q ss_pred eeeccCCCcHHHHHHHHHc----CC--CcEEEEccCCC-CCCC--CCcccEEEecCcCcccccChHHHHHHHHhccCCCc
Q 041513 8 MSFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQ-LPYP--SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGG 78 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~-LPfp--d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG 78 (294)
..+...|+++.+++.|+++ ++ .+.+...+... ++.. +++||+|++.... .+...++.++.++|||||
T Consensus 79 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~----~~~~~~l~~~~~~L~pgG 154 (233)
T 2gpy_A 79 ATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAK----GQYRRFFDMYSPMVRPGG 154 (233)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGG----SCHHHHHHHHGGGEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCCH----HHHHHHHHHHHHHcCCCe
Confidence 3567789999999999876 44 36666666554 3544 6889999987665 255689999999999999
Q ss_pred EEEEEc
Q 041513 79 YWVVSG 84 (294)
Q Consensus 79 ~~vis~ 84 (294)
++++..
T Consensus 155 ~lv~~~ 160 (233)
T 2gpy_A 155 LILSDN 160 (233)
T ss_dssp EEEEET
T ss_pred EEEEEc
Confidence 999974
No 179
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.49 E-value=5.6e-05 Score=70.77 Aligned_cols=74 Identities=12% Similarity=0.021 Sum_probs=56.8
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccC-hHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY-DGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d-~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|.|+ |++.|+++ ++ .+.+..++.+.++++ ++||+|++...++|+... ....+.++.|+|||||.++
T Consensus 75 ~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 75 KIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp EEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEE
T ss_pred EEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEE
Confidence 455668885 88888764 44 366777888888876 579999999888776533 3478889999999999998
Q ss_pred EEc
Q 041513 82 VSG 84 (294)
Q Consensus 82 is~ 84 (294)
++.
T Consensus 153 ~~~ 155 (348)
T 2y1w_A 153 PTI 155 (348)
T ss_dssp SCE
T ss_pred Eec
Confidence 653
No 180
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.49 E-value=0.00012 Score=65.04 Aligned_cols=112 Identities=16% Similarity=0.081 Sum_probs=62.7
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEE-ccCCCC---CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGL-LSTYQL---PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v-~d~~~L---Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.|+|++|++.|+++........ .+...+ .++...||.+.+..++.+. ..+|.|+.|+|||||+|++..
T Consensus 62 ~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l----~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 62 LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL----DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG----GGTHHHHHHHSCTTCEEEEEE
T ss_pred EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH----HHHHHHHHHhccCCCEEEEEE
Confidence 56778999999999987653322211 011111 1111123444444444332 479999999999999999975
Q ss_pred CCCCccc----cCCCcccChHHHHHHHHHHHHHHHhhceEeeec
Q 041513 85 PPISWKT----SYRGWERDAKDLQKEQISLENLATRLCWKKIAE 124 (294)
Q Consensus 85 pp~~~~~----~~~~w~~~~e~l~~~~~~le~l~~~lcW~~v~~ 124 (294)
.|..-.. ...|..++........+.+.++++..+|+....
T Consensus 138 ~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~ 181 (232)
T 3opn_A 138 KPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGL 181 (232)
T ss_dssp CHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred CcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEE
Confidence 4322110 001222222222335567777888888876653
No 181
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.49 E-value=1.8e-05 Score=69.57 Aligned_cols=74 Identities=9% Similarity=0.146 Sum_probs=56.6
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+...|+|+.|+++|+++ |+...+.+.+.... .+.+.||+|++..++||. ++...++..+.+.|||||.||--.
T Consensus 75 ~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LHlL-~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 75 IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLPVL-KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHHHH-HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHHhh-hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 566779999999999875 55534444554333 567889999999999555 666678889999999999887643
No 182
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.47 E-value=0.00012 Score=63.32 Aligned_cols=73 Identities=10% Similarity=0.022 Sum_probs=51.4
Q ss_pred eeccCCCcHHHHHHHHHcC---CCcEEEEccCCCCC---CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALERG---LPAMVGLLSTYQLP---YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---v~~~~~v~d~~~LP---fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+.+.|+|+.|++.++++. ..+.+...|..... ..+++||+|++.... ......++.++.|+|||||++++
T Consensus 100 ~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~~---~~~~~~~l~~~~~~LkpgG~l~~ 176 (227)
T 1g8a_A 100 KIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQ---PTQAKILIDNAEVYLKRGGYGMI 176 (227)
T ss_dssp EEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCCS---TTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCCC---HhHHHHHHHHHHHhcCCCCEEEE
Confidence 4566799999999887642 24667777766521 124689999976541 22222459999999999999999
Q ss_pred Ec
Q 041513 83 SG 84 (294)
Q Consensus 83 s~ 84 (294)
+.
T Consensus 177 ~~ 178 (227)
T 1g8a_A 177 AV 178 (227)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 183
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.42 E-value=6.9e-05 Score=64.18 Aligned_cols=71 Identities=13% Similarity=0.090 Sum_probs=53.3
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCC-CCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+...|+|+.|++.|+++ ++ .+.+..+++.. ++..++ ||+|++... ..+...+++++.|+|||||+++
T Consensus 83 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~----~~~~~~~l~~~~~~LkpgG~lv 157 (210)
T 3c3p_A 83 RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD----VFNGADVLERMNRCLAKNALLI 157 (210)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT----TSCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC----hhhhHHHHHHHHHhcCCCeEEE
Confidence 566779999999999864 33 35666677543 465556 999998743 2345589999999999999999
Q ss_pred EEc
Q 041513 82 VSG 84 (294)
Q Consensus 82 is~ 84 (294)
+..
T Consensus 158 ~~~ 160 (210)
T 3c3p_A 158 AVN 160 (210)
T ss_dssp EES
T ss_pred EEC
Confidence 854
No 184
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.40 E-value=0.0003 Score=63.70 Aligned_cols=76 Identities=11% Similarity=-0.062 Sum_probs=54.0
Q ss_pred eeccCCC-cHHHHHHHHHcC---------C------CcEEEEccCCCC--CC----CCCcccEEEecCcCcccccChHHH
Q 041513 9 SFAPLDV-HEAQVQFALERG---------L------PAMVGLLSTYQL--PY----PSRSFDVAHCSRCLVPWTSYDGLY 66 (294)
Q Consensus 9 s~ap~D~-S~~mlq~A~erg---------v------~~~~~v~d~~~L--Pf----pd~sFD~V~~s~~l~h~~~d~~~~ 66 (294)
.+...|+ |+.|++.|+++. + .+.+...+.... .+ +++.||+|+++.+++| ..+...+
T Consensus 104 ~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~-~~~~~~l 182 (281)
T 3bzb_A 104 QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSF-HQAHDAL 182 (281)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSC-GGGHHHH
T ss_pred EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccC-hHHHHHH
Confidence 4667899 899999997742 1 233433332111 12 4688999999999954 5566689
Q ss_pred HHHHHhccC---C--CcEEEEEcC
Q 041513 67 LMEIDRVLR---P--GGYWVVSGP 85 (294)
Q Consensus 67 L~Ei~RVLK---P--GG~~vis~p 85 (294)
++++.|+|| | ||.++++..
T Consensus 183 l~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 183 LRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp HHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred HHHHHHHhcccCCCCCCEEEEEEE
Confidence 999999999 9 998877653
No 185
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.40 E-value=0.00017 Score=61.96 Aligned_cols=73 Identities=25% Similarity=0.273 Sum_probs=53.7
Q ss_pred eeeccCCCcHHHHHHHHHc----CCC--cEEEEccCC-CCCC-CC----CcccEEEecCcCcccccChHHHHHHHHhccC
Q 041513 8 MSFAPLDVHEAQVQFALER----GLP--AMVGLLSTY-QLPY-PS----RSFDVAHCSRCLVPWTSYDGLYLMEIDRVLR 75 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~-~LPf-pd----~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLK 75 (294)
..+...|+++.|++.|+++ ++. +.+.++++. .++. +. ++||+|++... ..+...++.++.|+||
T Consensus 90 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~----~~~~~~~l~~~~~~L~ 165 (225)
T 3tr6_A 90 GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDAD----KANTDLYYEESLKLLR 165 (225)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSC----GGGHHHHHHHHHHHEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCC----HHHHHHHHHHHHHhcC
Confidence 3567789999999999875 443 667677653 3332 21 78999996543 3345579999999999
Q ss_pred CCcEEEEEc
Q 041513 76 PGGYWVVSG 84 (294)
Q Consensus 76 PGG~~vis~ 84 (294)
|||+|++..
T Consensus 166 pgG~lv~~~ 174 (225)
T 3tr6_A 166 EGGLIAVDN 174 (225)
T ss_dssp EEEEEEEEC
T ss_pred CCcEEEEeC
Confidence 999999865
No 186
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.40 E-value=6.5e-05 Score=70.07 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=53.6
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChH--HHHHHHHhccCC---CcEEEEEc
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDG--LYLMEIDRVLRP---GGYWVVSG 84 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~--~~L~Ei~RVLKP---GG~~vis~ 84 (294)
+...|+ +.|++.|++. -.+.+...|... |++ .||+|++..++|||. ++. .+|+++.|+||| ||++++..
T Consensus 220 ~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~-d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 220 CTVFDQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWN-DEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp EEEEEC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGGSC-HHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred EEEecc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccCCC-HHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 445588 5888877653 236666677665 776 399999999996664 444 899999999999 99999976
Q ss_pred C
Q 041513 85 P 85 (294)
Q Consensus 85 p 85 (294)
.
T Consensus 294 ~ 294 (358)
T 1zg3_A 294 I 294 (358)
T ss_dssp C
T ss_pred e
Confidence 4
No 187
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.38 E-value=0.00024 Score=69.25 Aligned_cols=75 Identities=12% Similarity=0.054 Sum_probs=53.2
Q ss_pred eeccCCCcHHHHHHH-------HHc----C--C-CcEEEEccCCCC--CC--CCCcccEEEecCcCcccccChHHHHHHH
Q 041513 9 SFAPLDVHEAQVQFA-------LER----G--L-PAMVGLLSTYQL--PY--PSRSFDVAHCSRCLVPWTSYDGLYLMEI 70 (294)
Q Consensus 9 s~ap~D~S~~mlq~A-------~er----g--v-~~~~~v~d~~~L--Pf--pd~sFD~V~~s~~l~h~~~d~~~~L~Ei 70 (294)
.+.+.|+++.|++.| +++ | . .+.+..++.... +| ..++||+|+++.++ +..+...+|+|+
T Consensus 268 ~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~~d~~~~L~el 345 (433)
T 1u2z_A 268 LSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL--FDEDLNKKVEKI 345 (433)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT--CCHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCCCCEEEEeCcc--ccccHHHHHHHH
Confidence 366778888888777 553 4 2 355555543322 23 35789999987666 234566789999
Q ss_pred HhccCCCcEEEEEcC
Q 041513 71 DRVLRPGGYWVVSGP 85 (294)
Q Consensus 71 ~RVLKPGG~~vis~p 85 (294)
.|+|||||++++..+
T Consensus 346 ~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 346 LQTAKVGCKIISLKS 360 (433)
T ss_dssp HTTCCTTCEEEESSC
T ss_pred HHhCCCCeEEEEeec
Confidence 999999999999753
No 188
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.35 E-value=0.00014 Score=65.55 Aligned_cols=79 Identities=9% Similarity=-0.012 Sum_probs=57.0
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCC----CCCcccEEEec------CcCc-----------ccccC
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPY----PSRSFDVAHCS------RCLV-----------PWTSY 62 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPf----pd~sFD~V~~s------~~l~-----------h~~~d 62 (294)
.+...|+|+.+++.++++ |+ .+.+...|+..++. +++.||+|++. .++. +....
T Consensus 110 ~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~ 189 (274)
T 3ajd_A 110 TIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLR 189 (274)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTC
T ss_pred EEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHH
Confidence 466789999999998875 55 46666777766655 36789999975 1221 11234
Q ss_pred hHHHHHHHHhccCCCcEEEEEcCCC
Q 041513 63 DGLYLMEIDRVLRPGGYWVVSGPPI 87 (294)
Q Consensus 63 ~~~~L~Ei~RVLKPGG~~vis~pp~ 87 (294)
...++.++.++|||||++++++..+
T Consensus 190 ~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 190 QKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEECCC
Confidence 4679999999999999999987533
No 189
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.34 E-value=0.00014 Score=67.09 Aligned_cols=75 Identities=19% Similarity=0.243 Sum_probs=51.6
Q ss_pred eeccCCCcHHHHHHHHHcC----------CCcEEEEccCCC-CCCCCCcccEEEecCcCcccccCh----HHHHHHHHhc
Q 041513 9 SFAPLDVHEAQVQFALERG----------LPAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSYD----GLYLMEIDRV 73 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----------v~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d~----~~~L~Ei~RV 73 (294)
.+...|++++|++.|+++- ..+.+.++|+.. ++.++++||+|++.... ++.... ..+++++.|+
T Consensus 109 ~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~-p~~~~~~l~~~~f~~~~~~~ 187 (294)
T 3adn_A 109 SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTD-PIGPGESLFTSAFYEGCKRC 187 (294)
T ss_dssp EEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC-----------CCHHHHHHHHHT
T ss_pred EEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCC-ccCcchhccHHHHHHHHHHh
Confidence 4566799999999998741 135666677543 45567899999996544 333221 4699999999
Q ss_pred cCCCcEEEEEc
Q 041513 74 LRPGGYWVVSG 84 (294)
Q Consensus 74 LKPGG~~vis~ 84 (294)
|||||.|++..
T Consensus 188 LkpgG~lv~~~ 198 (294)
T 3adn_A 188 LNPGGIFVAQN 198 (294)
T ss_dssp EEEEEEEEEEE
T ss_pred cCCCCEEEEec
Confidence 99999999965
No 190
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.34 E-value=0.00035 Score=65.56 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=54.6
Q ss_pred eeccCCCcHHHHHHHHHcC---------CCcEEEEccCCCC--CCCCCcccEEEecCcCcccc--cC--hHHHHHHHHhc
Q 041513 9 SFAPLDVHEAQVQFALERG---------LPAMVGLLSTYQL--PYPSRSFDVAHCSRCLVPWT--SY--DGLYLMEIDRV 73 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---------v~~~~~v~d~~~L--Pfpd~sFD~V~~s~~l~h~~--~d--~~~~L~Ei~RV 73 (294)
.+...|+|+.|++.|+++- ..+.+.++|+... .+++++||+|++.... ++. .. ...+++++.|+
T Consensus 146 ~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~-p~~~~~~l~~~~~l~~~~~~ 224 (334)
T 1xj5_A 146 QIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSD-PIGPAKELFEKPFFQSVARA 224 (334)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCC-TTSGGGGGGSHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCC-ccCcchhhhHHHHHHHHHHh
Confidence 5667799999999998752 2466667775442 2457899999986542 221 11 24799999999
Q ss_pred cCCCcEEEEEc
Q 041513 74 LRPGGYWVVSG 84 (294)
Q Consensus 74 LKPGG~~vis~ 84 (294)
|||||.|++..
T Consensus 225 LkpgG~lv~~~ 235 (334)
T 1xj5_A 225 LRPGGVVCTQA 235 (334)
T ss_dssp EEEEEEEEEEC
T ss_pred cCCCcEEEEec
Confidence 99999999975
No 191
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.31 E-value=0.00026 Score=68.17 Aligned_cols=76 Identities=18% Similarity=0.130 Sum_probs=57.1
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCC--CCCCcccEEEe----c--CcCcccccCh-------------
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLP--YPSRSFDVAHC----S--RCLVPWTSYD------------- 63 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LP--fpd~sFD~V~~----s--~~l~h~~~d~------------- 63 (294)
.+...|+|+.+++.++++ |+.+.+...|...++ +++++||+|++ + .++ +-.++.
T Consensus 272 ~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~-~~~p~~~~~~~~~~~~~l~ 350 (429)
T 1sqg_A 272 QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVI-RRHPDIKWLRRDRDIPELA 350 (429)
T ss_dssp EEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGT-TTCTTHHHHCCTTHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCCccccc-CCCcchhhcCCHHHHHHHH
Confidence 466779999999988765 667777778887776 77789999995 2 222 212221
Q ss_pred ---HHHHHHHHhccCCCcEEEEEcC
Q 041513 64 ---GLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 64 ---~~~L~Ei~RVLKPGG~~vis~p 85 (294)
..+|.++.++|||||++++++-
T Consensus 351 ~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 351 QLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 3689999999999999999874
No 192
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.28 E-value=0.00027 Score=65.71 Aligned_cols=75 Identities=15% Similarity=0.114 Sum_probs=51.7
Q ss_pred eeccCCCcHHHHHHHHHcC---------CCcEEEEccCCC-CCCCCCcccEEEecCcCcccccCh----HHHHHHHHhcc
Q 041513 9 SFAPLDVHEAQVQFALERG---------LPAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSYD----GLYLMEIDRVL 74 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---------v~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d~----~~~L~Ei~RVL 74 (294)
.+...|+++.+++.|+++- ..+.+...|+.. ++..+++||+|++...- |+.... ..+++++.|+|
T Consensus 134 ~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~-~~~~~~~l~t~~~l~~~~~~L 212 (314)
T 2b2c_A 134 KVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSD-PVGPAESLFGQSYYELLRDAL 212 (314)
T ss_dssp EEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC--------------HHHHHHHHE
T ss_pred EEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCC-CCCcchhhhHHHHHHHHHhhc
Confidence 5667799999999999852 134566666443 44467899999986543 433221 47899999999
Q ss_pred CCCcEEEEEc
Q 041513 75 RPGGYWVVSG 84 (294)
Q Consensus 75 KPGG~~vis~ 84 (294)
||||.+++..
T Consensus 213 kpgG~lv~~~ 222 (314)
T 2b2c_A 213 KEDGILSSQG 222 (314)
T ss_dssp EEEEEEEEEC
T ss_pred CCCeEEEEEC
Confidence 9999999976
No 193
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.27 E-value=0.0003 Score=62.91 Aligned_cols=73 Identities=11% Similarity=-0.017 Sum_probs=48.8
Q ss_pred eeccCCCcHHHH----HHHHHcCCCcEEEEccCCCCC---CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQV----QFALERGLPAMVGLLSTYQLP---YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~ml----q~A~ergv~~~~~v~d~~~LP---fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+|+.|+ +.|+++ .++.+.++|+.... ...++||+|++.... .+....++..+.|+|||||+|+
T Consensus 103 ~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lv 178 (232)
T 3id6_C 103 KAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDML 178 (232)
T ss_dssp EEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEE
Confidence 466779999885 445554 35667777765432 124689999988654 2223234456667999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
++..
T Consensus 179 isik 182 (232)
T 3id6_C 179 LVIK 182 (232)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9863
No 194
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.26 E-value=3.5e-05 Score=68.01 Aligned_cols=76 Identities=14% Similarity=0.184 Sum_probs=49.7
Q ss_pred eeeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCC---CCC---CCcccEEEecCcCcccc--------------c
Q 041513 8 MSFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQL---PYP---SRSFDVAHCSRCLVPWT--------------S 61 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~L---Pfp---d~sFD~V~~s~~l~h~~--------------~ 61 (294)
..+.+.|+|+.|++.|+++ ++. +.+..+|+... +++ +++||+|+|.-.+++.. .
T Consensus 90 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~ 169 (254)
T 2h00_A 90 WYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPP 169 (254)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC------------------
T ss_pred CeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccC
Confidence 3577789999999999875 443 67777776542 565 37899999986553322 0
Q ss_pred ChHHHHHHHHhccCCCcEEEEE
Q 041513 62 YDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 62 d~~~~L~Ei~RVLKPGG~~vis 83 (294)
....++.++.|+|||||.+.+.
T Consensus 170 ~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 170 PSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp -------CTTTTHHHHTHHHHH
T ss_pred CHHHHhhhHHHHEecCCEEEEE
Confidence 1124578999999999988765
No 195
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.26 E-value=0.00039 Score=68.39 Aligned_cols=77 Identities=17% Similarity=0.209 Sum_probs=55.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCC-CCCcccEEEe----cC--cCc-------cccc--------
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPY-PSRSFDVAHC----SR--CLV-------PWTS-------- 61 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPf-pd~sFD~V~~----s~--~l~-------h~~~-------- 61 (294)
.+...|+|+.+++.++++ |+ .+.+.+.|+..++. .+++||.|++ +. ++. +|..
T Consensus 144 ~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~ 223 (479)
T 2frx_A 144 AILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAA 223 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHH
Confidence 466789999999999875 55 45666778877764 5688999997 21 221 1111
Q ss_pred ChHHHHHHHHhccCCCcEEEEEcC
Q 041513 62 YDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 62 d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
....+|.++.|+|||||++++++-
T Consensus 224 ~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 224 TQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHHHHhcCCCCEEEEecc
Confidence 023589999999999999999874
No 196
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.25 E-value=0.00013 Score=67.41 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=56.4
Q ss_pred eeccCCCcHHHHHHHHHcC----------CCcEEEEccCCC-CCCCCCcccEEEecCcCccc---ccC----hHHHHHHH
Q 041513 9 SFAPLDVHEAQVQFALERG----------LPAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPW---TSY----DGLYLMEI 70 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----------v~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~---~~d----~~~~L~Ei 70 (294)
.+...|+++.|++.|+++- ..+.+.++|+.. ++..+++||+|++.... |+ ... ...+++++
T Consensus 103 ~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~-~~~~~~~~~~l~~~~~l~~~ 181 (314)
T 1uir_A 103 KAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTD-PVGEDNPARLLYTVEFYRLV 181 (314)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCC-CBSTTCGGGGGSSHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCC-cccccCcchhccHHHHHHHH
Confidence 5667799999999998742 235666677554 45567899999998665 54 211 24789999
Q ss_pred HhccCCCcEEEEEc
Q 041513 71 DRVLRPGGYWVVSG 84 (294)
Q Consensus 71 ~RVLKPGG~~vis~ 84 (294)
.|+|||||.|++..
T Consensus 182 ~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 182 KAHLNPGGVMGMQT 195 (314)
T ss_dssp HHTEEEEEEEEEEE
T ss_pred HHhcCCCcEEEEEc
Confidence 99999999999964
No 197
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.24 E-value=0.00043 Score=63.47 Aligned_cols=76 Identities=12% Similarity=0.063 Sum_probs=53.3
Q ss_pred eeccCCCcHHHHHHHHHcC---------CCcEEEEccCCC-CCCCCCcccEEEecCcCccccc-----ChHHHHHHHHhc
Q 041513 9 SFAPLDVHEAQVQFALERG---------LPAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTS-----YDGLYLMEIDRV 73 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---------v~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~-----d~~~~L~Ei~RV 73 (294)
.+...|+++.+++.|+++- ..+.+.+.|+.. ++..+++||+|++...- ++.. ....+++++.|+
T Consensus 116 ~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~-~~~~~~~~l~~~~~l~~~~~~ 194 (296)
T 1inl_A 116 KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTD-PTAGQGGHLFTEEFYQACYDA 194 (296)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC-----------CCSHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCC-cccCchhhhhHHHHHHHHHHh
Confidence 5667799999999998752 235666676443 45567889999985332 3221 124799999999
Q ss_pred cCCCcEEEEEcC
Q 041513 74 LRPGGYWVVSGP 85 (294)
Q Consensus 74 LKPGG~~vis~p 85 (294)
|||||.|++...
T Consensus 195 LkpgG~lv~~~~ 206 (296)
T 1inl_A 195 LKEDGVFSAETE 206 (296)
T ss_dssp EEEEEEEEEECC
T ss_pred cCCCcEEEEEcc
Confidence 999999999763
No 198
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.23 E-value=0.00011 Score=72.33 Aligned_cols=74 Identities=12% Similarity=0.021 Sum_probs=56.4
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccC-hHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY-DGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d-~~~~L~Ei~RVLKPGG~~v 81 (294)
.+.+.|+|+ |++.|+++ ++ .+.+..++...++++ +.||+|+|...++|+... ....+.++.|+|||||+++
T Consensus 183 ~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li 260 (480)
T 3b3j_A 183 KIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 260 (480)
T ss_dssp EEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEE
T ss_pred EEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEE
Confidence 456779998 99888764 44 367777888888776 579999998777565432 3467889999999999998
Q ss_pred EEc
Q 041513 82 VSG 84 (294)
Q Consensus 82 is~ 84 (294)
+..
T Consensus 261 ~~~ 263 (480)
T 3b3j_A 261 PTI 263 (480)
T ss_dssp SCE
T ss_pred EEe
Confidence 643
No 199
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.22 E-value=4.6e-05 Score=69.72 Aligned_cols=53 Identities=13% Similarity=0.002 Sum_probs=38.5
Q ss_pred CcEEE--EccCCCCCCCCCcccEEEecCcCccc----ccChH--HHHHHHHhccCCCc--EEEEEc
Q 041513 29 PAMVG--LLSTYQLPYPSRSFDVAHCSRCLVPW----TSYDG--LYLMEIDRVLRPGG--YWVVSG 84 (294)
Q Consensus 29 ~~~~~--v~d~~~LPfpd~sFD~V~~s~~l~h~----~~d~~--~~L~Ei~RVLKPGG--~~vis~ 84 (294)
++.+. ++|+..+| +++||+|+|..+ .+. .+... .+|.++.|+||||| .|++..
T Consensus 131 ~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 131 NLITFKSKVDVTKME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp GGEEEECSCCGGGCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred CeEEEeccCcHhhCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 46676 67777765 789999999876 221 11111 37999999999999 999865
No 200
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.21 E-value=5.2e-05 Score=68.86 Aligned_cols=53 Identities=15% Similarity=0.057 Sum_probs=38.5
Q ss_pred CcEEE--EccCCCCCCCCCcccEEEecCcCcccc----cChH--HHHHHHHhccCCCc--EEEEEc
Q 041513 29 PAMVG--LLSTYQLPYPSRSFDVAHCSRCLVPWT----SYDG--LYLMEIDRVLRPGG--YWVVSG 84 (294)
Q Consensus 29 ~~~~~--v~d~~~LPfpd~sFD~V~~s~~l~h~~----~d~~--~~L~Ei~RVLKPGG--~~vis~ 84 (294)
++.+. ++|+..+| +++||+|+|..+ .+.. +... .+|.++.|+||||| .|++..
T Consensus 123 ~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 123 NIVKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp GGEEEECSCCTTTSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CeEEEecccCHhHCC--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 45666 67777765 789999999866 2211 1111 37999999999999 999865
No 201
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.20 E-value=0.00023 Score=59.95 Aligned_cols=42 Identities=12% Similarity=0.212 Sum_probs=33.2
Q ss_pred CCCCcccEEEecCcCcccc----cCh-------HHHHHHHHhccCCCcEEEEEc
Q 041513 42 YPSRSFDVAHCSRCLVPWT----SYD-------GLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 42 fpd~sFD~V~~s~~l~h~~----~d~-------~~~L~Ei~RVLKPGG~~vis~ 84 (294)
+++++||+|+|..++ |+. .+. ..+++++.|+|||||.|++..
T Consensus 102 ~~~~~fD~v~~~~~~-~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 102 LQDKKIDIILSDAAV-PCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp HTTCCEEEEEECCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCcccEEEeCCCc-CCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 678899999998887 542 111 137899999999999999865
No 202
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.20 E-value=0.00032 Score=63.90 Aligned_cols=76 Identities=16% Similarity=0.183 Sum_probs=55.1
Q ss_pred eeccCCCcHHHHHHHHHcC---------CCcEEEEccCCC-CCCCCCcccEEEecCcCcccccCh----HHHHHHHHhcc
Q 041513 9 SFAPLDVHEAQVQFALERG---------LPAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSYD----GLYLMEIDRVL 74 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---------v~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d~----~~~L~Ei~RVL 74 (294)
.+...|+++.+++.|+++- ..+.+.+.|+.. ++..+++||+|++.... ++.... ..+++++.|+|
T Consensus 104 ~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L 182 (283)
T 2i7c_A 104 NIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSD-PIGPAETLFNQNFYEKIYNAL 182 (283)
T ss_dssp EEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCC-TTTGGGGGSSHHHHHHHHHHE
T ss_pred EEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCCC-CCCcchhhhHHHHHHHHHHhc
Confidence 5667799999999999852 235666666543 33347889999986443 332221 47999999999
Q ss_pred CCCcEEEEEcC
Q 041513 75 RPGGYWVVSGP 85 (294)
Q Consensus 75 KPGG~~vis~p 85 (294)
||||.+++...
T Consensus 183 ~pgG~lv~~~~ 193 (283)
T 2i7c_A 183 KPNGYCVAQCE 193 (283)
T ss_dssp EEEEEEEEECC
T ss_pred CCCcEEEEECC
Confidence 99999999864
No 203
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.18 E-value=0.00024 Score=66.41 Aligned_cols=76 Identities=14% Similarity=0.098 Sum_probs=54.3
Q ss_pred eeccCCCcHHHHHHHHHc----CCC---cEEEEccCCCCCC----CCCcccEEEecCc---------CcccccChHHHHH
Q 041513 9 SFAPLDVHEAQVQFALER----GLP---AMVGLLSTYQLPY----PSRSFDVAHCSRC---------LVPWTSYDGLYLM 68 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~---~~~~v~d~~~LPf----pd~sFD~V~~s~~---------l~h~~~d~~~~L~ 68 (294)
.+...|+|+.|++.|+++ ++. +.+.+.|+..+.. .+++||+|++.-- +.++..+...++.
T Consensus 177 ~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~ 256 (332)
T 2igt_A 177 EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLD 256 (332)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHH
Confidence 567789999999999875 443 5677777554321 1578999998321 1123334557999
Q ss_pred HHHhccCCCcEEEEEc
Q 041513 69 EIDRVLRPGGYWVVSG 84 (294)
Q Consensus 69 Ei~RVLKPGG~~vis~ 84 (294)
++.++|||||+|++..
T Consensus 257 ~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 257 ICREILSPKALGLVLT 272 (332)
T ss_dssp HHHHTBCTTCCEEEEE
T ss_pred HHHHhcCcCcEEEEEE
Confidence 9999999999987765
No 204
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.17 E-value=0.00033 Score=65.17 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=54.2
Q ss_pred eeccCCCcHHHHHHHHHcC---------CCcEEEEccCCC-CCCCCCcccEEEecCcCcccccC----hHHHHHHHHhcc
Q 041513 9 SFAPLDVHEAQVQFALERG---------LPAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSY----DGLYLMEIDRVL 74 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---------v~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d----~~~~L~Ei~RVL 74 (294)
.+...|+++++++.|+++- ..+.+.+.|+.. ++..+++||+|++...- ++... ...+++++.|+|
T Consensus 142 ~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~-p~~~~~~l~~~~~l~~~~~~L 220 (321)
T 2pt6_A 142 NIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSD-PIGPAETLFNQNFYEKIYNAL 220 (321)
T ss_dssp EEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCC-SSSGGGGGSSHHHHHHHHHHE
T ss_pred EEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCcC-CCCcchhhhHHHHHHHHHHhc
Confidence 5667799999999998852 135566666443 34457889999986432 33211 147999999999
Q ss_pred CCCcEEEEEc
Q 041513 75 RPGGYWVVSG 84 (294)
Q Consensus 75 KPGG~~vis~ 84 (294)
||||.+++..
T Consensus 221 kpgG~lv~~~ 230 (321)
T 2pt6_A 221 KPNGYCVAQC 230 (321)
T ss_dssp EEEEEEEEEE
T ss_pred CCCcEEEEEc
Confidence 9999999965
No 205
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.17 E-value=0.00027 Score=66.19 Aligned_cols=75 Identities=13% Similarity=0.108 Sum_probs=55.2
Q ss_pred eeccCCCcHHHHHHHHHcC-----CCcEEEEccCCCC--CCCCCcccEEEecCcCccccc----ChHHHHHHHHhccCCC
Q 041513 9 SFAPLDVHEAQVQFALERG-----LPAMVGLLSTYQL--PYPSRSFDVAHCSRCLVPWTS----YDGLYLMEIDRVLRPG 77 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg-----v~~~~~v~d~~~L--Pfpd~sFD~V~~s~~l~h~~~----d~~~~L~Ei~RVLKPG 77 (294)
.+...|+++.|++.|+++- -.+.+.+.|+... .+++++||+|++.... ++.. ....+++++.|+||||
T Consensus 115 ~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~-~~~~~~~L~t~efl~~~~r~Lkpg 193 (317)
T 3gjy_A 115 RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA-GAITPQNFTTVEFFEHCHRGLAPG 193 (317)
T ss_dssp EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST-TSCCCGGGSBHHHHHHHHHHEEEE
T ss_pred EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC-ccccchhhhHHHHHHHHHHhcCCC
Confidence 4566799999999999862 2356667775543 3567899999986433 3211 1247999999999999
Q ss_pred cEEEEEc
Q 041513 78 GYWVVSG 84 (294)
Q Consensus 78 G~~vis~ 84 (294)
|.|++..
T Consensus 194 Gvlv~~~ 200 (317)
T 3gjy_A 194 GLYVANC 200 (317)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 9999865
No 206
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.15 E-value=0.00041 Score=62.64 Aligned_cols=71 Identities=10% Similarity=0.024 Sum_probs=56.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+++.+++.|+++ ++ ++.+..+|+..++. ++.||+|++.... +...++.++.|+|||||.++++
T Consensus 145 ~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~-----~~~~~l~~~~~~LkpgG~l~~s 218 (272)
T 3a27_A 145 LVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH-----KTHKFLDKTFEFLKDRGVIHYH 218 (272)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS-----SGGGGHHHHHHHEEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc-----cHHHHHHHHHHHcCCCCEEEEE
Confidence 466779999999999874 44 45677778777655 6789999987554 4457999999999999999998
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
..
T Consensus 219 ~~ 220 (272)
T 3a27_A 219 ET 220 (272)
T ss_dssp EE
T ss_pred Ec
Confidence 74
No 207
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.13 E-value=0.00015 Score=66.91 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=53.1
Q ss_pred eeccCCCcHHHHHHHHHcC---------CCcEEEEccCCC-CCCCCCcccEEEecCcCcccccC----hHHHHHHHHhcc
Q 041513 9 SFAPLDVHEAQVQFALERG---------LPAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSY----DGLYLMEIDRVL 74 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---------v~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d----~~~~L~Ei~RVL 74 (294)
.+...|+++.|++.|+++- ..+.+...|+.. ++..+++||+|++.... ++... ...+++++.|+|
T Consensus 121 ~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L 199 (304)
T 2o07_A 121 SVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSD-PMGPAESLFKESYYQLMKTAL 199 (304)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC------------CHHHHHHHHHE
T ss_pred EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEECCCC-CCCcchhhhHHHHHHHHHhcc
Confidence 4666799999999998752 235666677543 55567899999986544 33211 136899999999
Q ss_pred CCCcEEEEEc
Q 041513 75 RPGGYWVVSG 84 (294)
Q Consensus 75 KPGG~~vis~ 84 (294)
||||.|++..
T Consensus 200 kpgG~lv~~~ 209 (304)
T 2o07_A 200 KEDGVLCCQG 209 (304)
T ss_dssp EEEEEEEEEE
T ss_pred CCCeEEEEec
Confidence 9999999975
No 208
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.12 E-value=0.0002 Score=68.55 Aligned_cols=46 Identities=22% Similarity=0.350 Sum_probs=38.1
Q ss_pred CCCCCCCcccEEEecCcCcccccCh--------------------------------------HHHHHHHHhccCCCcEE
Q 041513 39 QLPYPSRSFDVAHCSRCLVPWTSYD--------------------------------------GLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 39 ~LPfpd~sFD~V~~s~~l~h~~~d~--------------------------------------~~~L~Ei~RVLKPGG~~ 80 (294)
.-.||+++||+|+++.+| ||..+. ..+|+...|.|+|||++
T Consensus 143 ~rlfP~~S~d~v~Ss~aL-HWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~m 221 (374)
T 3b5i_A 143 RRLFPARTIDFFHSAFSL-HWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAM 221 (374)
T ss_dssp SCCSCTTCEEEEEEESCT-TBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cccCCCcceEEEEeccee-eeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 345899999999999999 897632 22588889999999999
Q ss_pred EEEcC
Q 041513 81 VVSGP 85 (294)
Q Consensus 81 vis~p 85 (294)
+++..
T Consensus 222 vl~~~ 226 (374)
T 3b5i_A 222 FLVCL 226 (374)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99873
No 209
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.11 E-value=0.00094 Score=62.47 Aligned_cols=70 Identities=21% Similarity=0.212 Sum_probs=53.3
Q ss_pred CCCcHHHHHHHHHcC----C-CcEEEEccCCCCCCCCCcccEEEecCcCcccccCh-HHHHHHHHhccCCCcEEEEEcC
Q 041513 13 LDVHEAQVQFALERG----L-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD-GLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 13 ~D~S~~mlq~A~erg----v-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~-~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.|. +.+++.|+++. . .+.+...|....|++ .+|+|++..+||+|.++. ..+|+++.++|+|||+++|...
T Consensus 209 ~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 209 FDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp EEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 354 67899998752 2 356666776555655 479999999998886543 3689999999999999999874
No 210
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.11 E-value=0.00035 Score=68.57 Aligned_cols=77 Identities=25% Similarity=0.263 Sum_probs=55.1
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCC-CCCCcccEEEe----cC--cCcc-------cccC--------
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLP-YPSRSFDVAHC----SR--CLVP-------WTSY-------- 62 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LP-fpd~sFD~V~~----s~--~l~h-------~~~d-------- 62 (294)
.+...|+|+.+++.++++ |+.+.+...|+..++ +.+++||+|++ +. ++.+ |..+
T Consensus 128 ~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~ 207 (464)
T 3m6w_A 128 LLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEV 207 (464)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHH
Confidence 456779999999999874 666666667766665 45789999994 21 2211 1110
Q ss_pred hHHHHHHHHhccCCCcEEEEEcC
Q 041513 63 DGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 63 ~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
...+|.++.++|||||+|++++-
T Consensus 208 Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 208 QKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEES
T ss_pred HHHHHHHHHHhcCCCcEEEEEec
Confidence 14689999999999999999874
No 211
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.10 E-value=0.001 Score=62.89 Aligned_cols=74 Identities=15% Similarity=-0.060 Sum_probs=53.9
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCccccc------C-hHHHHHHHHhccC
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTS------Y-DGLYLMEIDRVLR 75 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~------d-~~~~L~Ei~RVLK 75 (294)
.+.+.|+|+.|++.|+++ |+ .+.+.++|+..+|+++++||+|+|.--+..... + -..+++++.|+|
T Consensus 243 ~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l- 321 (373)
T 3tm4_A 243 EIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL- 321 (373)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-
Confidence 567889999999999875 55 578888999999999999999999644321111 1 146889999999
Q ss_pred CCcEEEEEc
Q 041513 76 PGGYWVVSG 84 (294)
Q Consensus 76 PGG~~vis~ 84 (294)
||.+++..
T Consensus 322 -~g~~~~i~ 329 (373)
T 3tm4_A 322 -EKRGVFIT 329 (373)
T ss_dssp -EEEEEEEE
T ss_pred -CCeEEEEE
Confidence 44444443
No 212
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.09 E-value=0.00039 Score=59.72 Aligned_cols=73 Identities=15% Similarity=0.114 Sum_probs=53.3
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCC-C-CC---CCcccEEEecCcCcccccChHHHHHHHHhccCCC
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQL-P-YP---SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPG 77 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~L-P-fp---d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPG 77 (294)
.+...|+++.+++.|+++ ++ .+.+.++++... + ++ .++||+|++.... .....++.++.|+||||
T Consensus 85 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~~----~~~~~~l~~~~~~L~pg 160 (223)
T 3duw_A 85 RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDADK----QNNPAYFEWALKLSRPG 160 (223)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSCG----GGHHHHHHHHHHTCCTT
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCCc----HHHHHHHHHHHHhcCCC
Confidence 567789999999999864 44 366767765332 2 22 2679999987553 23347999999999999
Q ss_pred cEEEEEcC
Q 041513 78 GYWVVSGP 85 (294)
Q Consensus 78 G~~vis~p 85 (294)
|++++...
T Consensus 161 G~lv~~~~ 168 (223)
T 3duw_A 161 TVIIGDNV 168 (223)
T ss_dssp CEEEEESC
T ss_pred cEEEEeCC
Confidence 98888653
No 213
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.07 E-value=0.0016 Score=56.77 Aligned_cols=72 Identities=24% Similarity=0.262 Sum_probs=53.4
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCC-CC--------------CCC--CcccEEEecCcCcccccChHH
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQ-LP--------------YPS--RSFDVAHCSRCLVPWTSYDGL 65 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~-LP--------------fpd--~sFD~V~~s~~l~h~~~d~~~ 65 (294)
.+...|+++.+++.|+++ ++. +.+..++... ++ |++ ++||+|++.... .+...
T Consensus 87 ~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~----~~~~~ 162 (239)
T 2hnk_A 87 KILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK----ENYPN 162 (239)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG----GGHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCH----HHHHH
Confidence 566779999999999875 442 5566665332 22 444 889999988554 23447
Q ss_pred HHHHHHhccCCCcEEEEEc
Q 041513 66 YLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 66 ~L~Ei~RVLKPGG~~vis~ 84 (294)
++.++.++|||||++++..
T Consensus 163 ~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 163 YYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCeEEEEEc
Confidence 9999999999999999965
No 214
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.03 E-value=0.00024 Score=63.25 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=53.7
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCC-CCC------CCCcccEEEecCcCcccccChHHHHHHHHhccC
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQ-LPY------PSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLR 75 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~-LPf------pd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLK 75 (294)
.+...|+++.|++.|+++ ++ .+.+..+++.. ++. ++++||+|++.... .+...++.++.|+||
T Consensus 106 ~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~----~~~~~~l~~~~~~Lk 181 (247)
T 1sui_A 106 KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADK----DNYLNYHKRLIDLVK 181 (247)
T ss_dssp EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCS----TTHHHHHHHHHHHBC
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCch----HHHHHHHHHHHHhCC
Confidence 466779999999999874 44 35666666543 342 26899999987442 345589999999999
Q ss_pred CCcEEEEEc
Q 041513 76 PGGYWVVSG 84 (294)
Q Consensus 76 PGG~~vis~ 84 (294)
|||++++..
T Consensus 182 pGG~lv~d~ 190 (247)
T 1sui_A 182 VGGVIGYDN 190 (247)
T ss_dssp TTCCEEEEC
T ss_pred CCeEEEEec
Confidence 999999864
No 215
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.01 E-value=0.00047 Score=62.56 Aligned_cols=75 Identities=13% Similarity=0.202 Sum_probs=55.3
Q ss_pred eeccCCCcHHHHHHHHHcC------C---CcEEEEccCCC-CCCCCCcccEEEecCcCcccccC----hHHHHHHHHhcc
Q 041513 9 SFAPLDVHEAQVQFALERG------L---PAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSY----DGLYLMEIDRVL 74 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg------v---~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d----~~~~L~Ei~RVL 74 (294)
.+...|+++.+++.|++.- . .+.+...|+.. ++..+++||+|++.... ++... ...+++++.|+|
T Consensus 101 ~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~-~~~~~~~l~~~~~~~~~~~~L 179 (275)
T 1iy9_A 101 KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTE-PVGPAVNLFTKGFYAGIAKAL 179 (275)
T ss_dssp EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSS-CCSCCCCCSTTHHHHHHHHHE
T ss_pred eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCC-CCCcchhhhHHHHHHHHHHhc
Confidence 4566799999999998742 2 35666677544 45557899999986544 43221 247999999999
Q ss_pred CCCcEEEEEc
Q 041513 75 RPGGYWVVSG 84 (294)
Q Consensus 75 KPGG~~vis~ 84 (294)
||||.|++..
T Consensus 180 ~pgG~lv~~~ 189 (275)
T 1iy9_A 180 KEDGIFVAQT 189 (275)
T ss_dssp EEEEEEEEEC
T ss_pred CCCcEEEEEc
Confidence 9999999975
No 216
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.00 E-value=0.00034 Score=61.27 Aligned_cols=72 Identities=19% Similarity=0.160 Sum_probs=53.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCC----CCCCCC--CcccEEEecCcCcccccChHHHHHHHHhccCC
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTY----QLPYPS--RSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRP 76 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~----~LPfpd--~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKP 76 (294)
.+...|+++.+++.|+++ ++ .+.+.+.++. .+++++ ++||+|++.... .+...++.++.|+|||
T Consensus 99 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~~----~~~~~~l~~~~~~Lkp 174 (232)
T 3cbg_A 99 QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDADK----RNYPRYYEIGLNLLRR 174 (232)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSCG----GGHHHHHHHHHHTEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCCH----HHHHHHHHHHHHHcCC
Confidence 466779999999999874 44 2556666632 344444 889999977542 3445799999999999
Q ss_pred CcEEEEEc
Q 041513 77 GGYWVVSG 84 (294)
Q Consensus 77 GG~~vis~ 84 (294)
||++++..
T Consensus 175 gG~lv~~~ 182 (232)
T 3cbg_A 175 GGLMVIDN 182 (232)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEeC
Confidence 99999965
No 217
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.96 E-value=0.00094 Score=56.43 Aligned_cols=71 Identities=8% Similarity=-0.025 Sum_probs=51.2
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccC-hHHHHHHHHhccCCCcEEEEEcC
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSY-DGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d-~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
.+.+.|+|+.|++.|+++...+.+.++|...+| ++||+|++...++|+... ...+++++.|+| |+ ++++.+
T Consensus 76 ~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~-~~~~~~ 147 (200)
T 1ne2_A 76 SVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MW-IYSIGN 147 (200)
T ss_dssp EEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-------CHHHHHHHHHHE--EE-EEEEEE
T ss_pred EEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhc--Cc-EEEEEc
Confidence 467789999999999987546777778877765 789999999998555432 236899999999 55 444443
No 218
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=96.89 E-value=0.00057 Score=61.82 Aligned_cols=67 Identities=10% Similarity=0.060 Sum_probs=51.0
Q ss_pred eeccCCCcHHHHHHHHHcC---------CCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcE
Q 041513 9 SFAPLDVHEAQVQFALERG---------LPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGY 79 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---------v~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~ 79 (294)
.+...|++++|++.|+++- ..+.+..+|+.... ++||+|++.. .++..+++++.|+|||||.
T Consensus 96 ~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~------~dp~~~~~~~~~~L~pgG~ 166 (262)
T 2cmg_A 96 HIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ------EPDIHRIDGLKRMLKEDGV 166 (262)
T ss_dssp EEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS------CCCHHHHHHHHTTEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC------CChHHHHHHHHHhcCCCcE
Confidence 5667799999999998642 13456566665544 8899999862 2444689999999999999
Q ss_pred EEEEc
Q 041513 80 WVVSG 84 (294)
Q Consensus 80 ~vis~ 84 (294)
+++..
T Consensus 167 lv~~~ 171 (262)
T 2cmg_A 167 FISVA 171 (262)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99964
No 219
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.82 E-value=0.0014 Score=59.69 Aligned_cols=75 Identities=16% Similarity=0.090 Sum_probs=53.0
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCCCCCCcc---cEEEecCcCc-----------ccc-------c
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLPYPSRSF---DVAHCSRCLV-----------PWT-------S 61 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LPfpd~sF---D~V~~s~~l~-----------h~~-------~ 61 (294)
.+.+.|+|+.+++.|+++ ++. +.+.++|... +++ ++| |+|+|.--.+ |.. .
T Consensus 148 ~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~ 225 (284)
T 1nv8_A 148 IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGE 225 (284)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTT
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCC
Confidence 566789999999999875 443 6777777654 333 579 9999962110 110 1
Q ss_pred ChHHHHHHHH-hccCCCcEEEEEcC
Q 041513 62 YDGLYLMEID-RVLRPGGYWVVSGP 85 (294)
Q Consensus 62 d~~~~L~Ei~-RVLKPGG~~vis~p 85 (294)
+...+++++. +.|+|||+|++..+
T Consensus 226 dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 226 DGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp TSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred cHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 2226899999 99999999998654
No 220
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.79 E-value=0.00042 Score=61.53 Aligned_cols=72 Identities=13% Similarity=0.074 Sum_probs=51.0
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCC-CCC-----CCcccEEEecCcCcccccChHHHHHHHHhccCC
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQL-PYP-----SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRP 76 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~L-Pfp-----d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKP 76 (294)
.+...|++++|++.|+++ ++ .+.+.++++... +.. +++||+|++... ..+...++.++.|+|||
T Consensus 87 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~----~~~~~~~l~~~~~~Lkp 162 (242)
T 3r3h_A 87 QVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDAD----KTNYLNYYELALKLVTP 162 (242)
T ss_dssp EEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESC----GGGHHHHHHHHHHHEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCC----hHHhHHHHHHHHHhcCC
Confidence 355567777777777654 54 366777775443 322 589999998754 23445789999999999
Q ss_pred CcEEEEEc
Q 041513 77 GGYWVVSG 84 (294)
Q Consensus 77 GG~~vis~ 84 (294)
||++++..
T Consensus 163 GG~lv~d~ 170 (242)
T 3r3h_A 163 KGLIAIDN 170 (242)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999964
No 221
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=96.78 E-value=0.00024 Score=65.77 Aligned_cols=53 Identities=15% Similarity=0.090 Sum_probs=36.8
Q ss_pred cEEEEc-cCCCCCCCCCcccEEEecCcCc--ccccChH---HHHHHHHhccCCCcEEEEEc
Q 041513 30 AMVGLL-STYQLPYPSRSFDVAHCSRCLV--PWTSYDG---LYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 30 ~~~~v~-d~~~LPfpd~sFD~V~~s~~l~--h~~~d~~---~~L~Ei~RVLKPGG~~vis~ 84 (294)
+.+... |...+ +.++||+|+|..+++ |+..+.. .+|.++.|+|||||.|++..
T Consensus 133 v~~~~~~D~~~l--~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 133 VRLQSGVDVFFI--PPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp EEEECSCCTTTS--CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred eEEEeccccccC--CcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 445445 55554 467999999977652 2222222 47999999999999999865
No 222
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.77 E-value=0.0014 Score=56.25 Aligned_cols=72 Identities=18% Similarity=0.170 Sum_probs=52.3
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCC-C-CCC----CcccEEEecCcCcccccChHHHHHHHHhccCC
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQL-P-YPS----RSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRP 76 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~L-P-fpd----~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKP 76 (294)
.+...|+++.+++.|+++ ++ .+.+...++... + +++ ++||+|++.... .....++.++.|+|||
T Consensus 96 ~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~----~~~~~~l~~~~~~L~p 171 (229)
T 2avd_A 96 RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADK----ENCSAYYERCLQLLRP 171 (229)
T ss_dssp EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSCS----TTHHHHHHHHHHHEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCCH----HHHHHHHHHHHHHcCC
Confidence 466679999999999875 44 456666664322 1 221 789999986542 3345799999999999
Q ss_pred CcEEEEEc
Q 041513 77 GGYWVVSG 84 (294)
Q Consensus 77 GG~~vis~ 84 (294)
||.+++..
T Consensus 172 gG~lv~~~ 179 (229)
T 2avd_A 172 GGILAVLR 179 (229)
T ss_dssp EEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999965
No 223
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.72 E-value=0.00098 Score=63.34 Aligned_cols=100 Identities=9% Similarity=0.094 Sum_probs=63.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC---CcEEEEccCCC-CCC---CCCcccEEEecCcC--------cccccChHHHHHH
Q 041513 9 SFAPLDVHEAQVQFALER----GL---PAMVGLLSTYQ-LPY---PSRSFDVAHCSRCL--------VPWTSYDGLYLME 69 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv---~~~~~v~d~~~-LPf---pd~sFD~V~~s~~l--------~h~~~d~~~~L~E 69 (294)
.+...|+|+.|++.|+++ ++ .+.+.++|+.. ++. ...+||+|++.--. .+.......++.+
T Consensus 237 ~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~ 316 (385)
T 2b78_A 237 ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQ 316 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHH
Confidence 466789999999999874 44 46677777544 332 24689999983211 1112222346788
Q ss_pred HHhccCCCcEEEEEcCCCCccccCCCcccChHHHHHHHHHHHHHHHhhceE
Q 041513 70 IDRVLRPGGYWVVSGPPISWKTSYRGWERDAKDLQKEQISLENLATRLCWK 120 (294)
Q Consensus 70 i~RVLKPGG~~vis~pp~~~~~~~~~w~~~~e~l~~~~~~le~l~~~lcW~ 120 (294)
+.++|+|||+++++..+... .. ...++.+...+.....+
T Consensus 317 ~~~~L~pgG~l~~~~~~~~~---------~~---~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 317 GLEILSENGLIIASTNAANM---------TV---SQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp HHHTEEEEEEEEEEECCTTS---------CH---HHHHHHHHHHHTTCCCE
T ss_pred HHHhcCCCcEEEEEeCCCcC---------CH---HHHHHHHHHHHHHcCCc
Confidence 89999999999998864322 11 23445565556555554
No 224
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.70 E-value=0.00039 Score=66.78 Aligned_cols=48 Identities=23% Similarity=0.264 Sum_probs=37.7
Q ss_pred CCCCCCCCCcccEEEecCcCcccccChHHH---------------------------------------HHHHHhccCCC
Q 041513 37 TYQLPYPSRSFDVAHCSRCLVPWTSYDGLY---------------------------------------LMEIDRVLRPG 77 (294)
Q Consensus 37 ~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~---------------------------------------L~Ei~RVLKPG 77 (294)
-..-.||+++||+|+++.+| ||..+.... |+-..|.|+||
T Consensus 140 Fy~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pG 218 (384)
T 2efj_A 140 FYSRLFPEESMHFLHSCYCL-HWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISR 218 (384)
T ss_dssp TTSCCSCTTCEEEEEEESCT-TBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred hhhccCCCCceEEEEeccee-eecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 34567999999999999999 997554222 44448999999
Q ss_pred cEEEEEcC
Q 041513 78 GYWVVSGP 85 (294)
Q Consensus 78 G~~vis~p 85 (294)
|+++++..
T Consensus 219 G~mvl~~~ 226 (384)
T 2efj_A 219 GRMLLTFI 226 (384)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEe
Confidence 99999863
No 225
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.69 E-value=0.00069 Score=61.48 Aligned_cols=74 Identities=14% Similarity=0.173 Sum_probs=52.6
Q ss_pred eeccCCCcHHHHHHHHHcC---------------CCcEEEEccCCC-CCCCCCcccEEEecCcCcccccC----hHHHHH
Q 041513 9 SFAPLDVHEAQVQFALERG---------------LPAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSY----DGLYLM 68 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---------------v~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d----~~~~L~ 68 (294)
.+...|+++.+++.|+++- ..+.+...|+.. ++. +++||+|++.... |+... ...+++
T Consensus 100 ~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~~-~~~~~~~l~~~~~l~ 177 (281)
T 1mjf_A 100 EVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIADSTD-PVGPAKVLFSEEFYR 177 (281)
T ss_dssp EEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEEECCC-CC-----TTSHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEECCCC-CCCcchhhhHHHHHH
Confidence 5667799999999998752 124556666433 333 6889999986553 33221 246899
Q ss_pred HHHhccCCCcEEEEEc
Q 041513 69 EIDRVLRPGGYWVVSG 84 (294)
Q Consensus 69 Ei~RVLKPGG~~vis~ 84 (294)
++.|+|||||.+++..
T Consensus 178 ~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 178 YVYDALNNPGIYVTQA 193 (281)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHhcCCCcEEEEEc
Confidence 9999999999999975
No 226
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.68 E-value=0.00057 Score=63.09 Aligned_cols=54 Identities=17% Similarity=0.031 Sum_probs=39.7
Q ss_pred cEE-EEccCCCCCCCCCcccEEEecCcCcccc-----c------ChHHHHHHHHhccCCCcEEEEEcC
Q 041513 30 AMV-GLLSTYQLPYPSRSFDVAHCSRCLVPWT-----S------YDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 30 ~~~-~v~d~~~LPfpd~sFD~V~~s~~l~h~~-----~------d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
+.+ .++|...++++ ++||+|+|.... ++. + ....+++++.|+|||||.|++...
T Consensus 107 v~~~i~gD~~~~~~~-~~fD~Vvsn~~~-~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 107 ADSTLIGDCATVHTA-NKWDLIISDMYD-PRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp SSEEEESCGGGCCCS-SCEEEEEECCCC-CC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEECccccCCcc-CcccEEEEcCCc-cccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 456 77888888775 789999986442 221 1 123689999999999999999763
No 227
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.66 E-value=0.0016 Score=63.70 Aligned_cols=77 Identities=16% Similarity=0.072 Sum_probs=53.1
Q ss_pred eeccCCCcHHHHHHHHHc----CCC-cEEEEccCCCCC-CCCCcccEEEecC---cCcccccCh----------------
Q 041513 9 SFAPLDVHEAQVQFALER----GLP-AMVGLLSTYQLP-YPSRSFDVAHCSR---CLVPWTSYD---------------- 63 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~-~~~~v~d~~~LP-fpd~sFD~V~~s~---~l~h~~~d~---------------- 63 (294)
.+...|+|+.+++.++++ |+. +.+...|+..++ +.+++||+|++-- ..-.+..++
T Consensus 132 ~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~ 211 (456)
T 3m4x_A 132 LLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQK 211 (456)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHH
Confidence 456779999999998764 554 555566766654 3468999999621 111111111
Q ss_pred --HHHHHHHHhccCCCcEEEEEcC
Q 041513 64 --GLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 64 --~~~L~Ei~RVLKPGG~~vis~p 85 (294)
..+|.++.++|||||++++++-
T Consensus 212 ~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 212 RQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEe
Confidence 2579999999999999999874
No 228
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.59 E-value=0.00028 Score=70.44 Aligned_cols=75 Identities=9% Similarity=-0.018 Sum_probs=58.0
Q ss_pred eeeccCCCcHHHHHHHHHc----C-CCcEEEEccCCCC--CCCCCcccEEEecCcCcccccChH--HHHHHHHhccCCCc
Q 041513 8 MSFAPLDVHEAQVQFALER----G-LPAMVGLLSTYQL--PYPSRSFDVAHCSRCLVPWTSYDG--LYLMEIDRVLRPGG 78 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----g-v~~~~~v~d~~~L--Pfpd~sFD~V~~s~~l~h~~~d~~--~~L~Ei~RVLKPGG 78 (294)
-.+.++|.|+.+|+.|+.+ | +++.+.+.+++.+ ++++++||+|+|..+++|.. ++. ..+..+.+.|+++|
T Consensus 89 a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~-~~~~~~~~~~~~~tl~~~~ 167 (569)
T 4azs_A 89 ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIV-HLHGIDEVKRLLSRLADVT 167 (569)
T ss_dssp CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHH-HHHCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhcCC-CHHHHHHHHHHHHHhcccc
Confidence 3677889999999998753 4 5678888888887 67889999999999997764 442 34556777788888
Q ss_pred EEEEE
Q 041513 79 YWVVS 83 (294)
Q Consensus 79 ~~vis 83 (294)
..++.
T Consensus 168 ~~~~~ 172 (569)
T 4azs_A 168 QAVIL 172 (569)
T ss_dssp SEEEE
T ss_pred ceeeE
Confidence 76654
No 229
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=96.58 E-value=0.00066 Score=59.80 Aligned_cols=72 Identities=13% Similarity=0.143 Sum_probs=52.7
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCC-CC-C-----CCCcccEEEecCcCcccccChHHHHHHHHhccC
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQ-LP-Y-----PSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLR 75 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~-LP-f-----pd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLK 75 (294)
.+...|+++.+++.|+++ |+. +.+.++++.. ++ + ++++||+|++... ..+...+++++.++||
T Consensus 97 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~----~~~~~~~l~~~~~~L~ 172 (237)
T 3c3y_A 97 KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDAD----KPNYIKYHERLMKLVK 172 (237)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSC----GGGHHHHHHHHHHHEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCc----hHHHHHHHHHHHHhcC
Confidence 456679999999999864 552 5666666443 23 2 2688999997633 2344579999999999
Q ss_pred CCcEEEEEc
Q 041513 76 PGGYWVVSG 84 (294)
Q Consensus 76 PGG~~vis~ 84 (294)
|||++++..
T Consensus 173 pGG~lv~d~ 181 (237)
T 3c3y_A 173 VGGIVAYDN 181 (237)
T ss_dssp EEEEEEEEC
T ss_pred CCeEEEEec
Confidence 999998864
No 230
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.58 E-value=0.0031 Score=58.51 Aligned_cols=77 Identities=17% Similarity=0.165 Sum_probs=58.7
Q ss_pred eeeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCcccccCh-----------------HHH
Q 041513 8 MSFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYD-----------------GLY 66 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~-----------------~~~ 66 (294)
..+.+.|+++.+++.|+.+ |+.+.+..+|+.. +.+...||+|++.--+.++..+. ..+
T Consensus 160 ~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~ 238 (344)
T 2f8l_A 160 VHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLF 238 (344)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHH
Confidence 5788999999999999874 6667777777554 34568899999987663332111 147
Q ss_pred HHHHHhccCCCcEEEEEcC
Q 041513 67 LMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 67 L~Ei~RVLKPGG~~vis~p 85 (294)
+.++.+.|||||++++..|
T Consensus 239 l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 239 IEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp HHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEEC
Confidence 9999999999999999875
No 231
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.55 E-value=0.0017 Score=61.39 Aligned_cols=80 Identities=15% Similarity=0.091 Sum_probs=56.3
Q ss_pred eeeccCCCcHHHHHHHHHc----CCC-cEEEEccCCCCCC----CCCcccEEEecCcCc--------ccccChHHHHHHH
Q 041513 8 MSFAPLDVHEAQVQFALER----GLP-AMVGLLSTYQLPY----PSRSFDVAHCSRCLV--------PWTSYDGLYLMEI 70 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv~-~~~~v~d~~~LPf----pd~sFD~V~~s~~l~--------h~~~d~~~~L~Ei 70 (294)
-.+...|+|+.+++.|+++ ++. +.+.++|+..... .+++||+|++.--.. +.......++.++
T Consensus 232 ~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~ 311 (382)
T 1wxx_A 232 REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRA 311 (382)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHH
Confidence 4577889999999999875 443 6677777554321 267899999842110 1112334689999
Q ss_pred HhccCCCcEEEEEcCCC
Q 041513 71 DRVLRPGGYWVVSGPPI 87 (294)
Q Consensus 71 ~RVLKPGG~~vis~pp~ 87 (294)
.++|+|||+++++..+.
T Consensus 312 ~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 312 IKLLKEGGILATASCSH 328 (382)
T ss_dssp HHTEEEEEEEEEEECCT
T ss_pred HHhcCCCCEEEEEECCC
Confidence 99999999999988643
No 232
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.55 E-value=0.0026 Score=60.37 Aligned_cols=79 Identities=15% Similarity=0.039 Sum_probs=56.6
Q ss_pred eeccCCCcHHHHHHHHHc----CC---CcEEEEccCCCCCC----CCCcccEEEecCcC--------cccccChHHHHHH
Q 041513 9 SFAPLDVHEAQVQFALER----GL---PAMVGLLSTYQLPY----PSRSFDVAHCSRCL--------VPWTSYDGLYLME 69 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv---~~~~~v~d~~~LPf----pd~sFD~V~~s~~l--------~h~~~d~~~~L~E 69 (294)
.+...|+|+.+++.|+++ ++ .+.+..+|+..... ....||+|++.--. .+.......++.+
T Consensus 245 ~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~ 324 (396)
T 3c0k_A 245 QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINML 324 (396)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHH
Confidence 567789999999999874 56 46677777554321 25789999985311 1222344578999
Q ss_pred HHhccCCCcEEEEEcCCC
Q 041513 70 IDRVLRPGGYWVVSGPPI 87 (294)
Q Consensus 70 i~RVLKPGG~~vis~pp~ 87 (294)
+.++|+|||+++++..+.
T Consensus 325 ~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 325 AIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp HHHTEEEEEEEEEEECCT
T ss_pred HHHhcCCCcEEEEEeCCC
Confidence 999999999999988654
No 233
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.51 E-value=0.00087 Score=68.86 Aligned_cols=78 Identities=18% Similarity=0.218 Sum_probs=57.3
Q ss_pred eeccCCCcHHHHHHHHHc----CCC---cEEEEccCCC-CCCCCCcccEEEecCcC----------cccccChHHHHHHH
Q 041513 9 SFAPLDVHEAQVQFALER----GLP---AMVGLLSTYQ-LPYPSRSFDVAHCSRCL----------VPWTSYDGLYLMEI 70 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~---~~~~v~d~~~-LPfpd~sFD~V~~s~~l----------~h~~~d~~~~L~Ei 70 (294)
.+...|+|+.+++.|+++ ++. +.+.++|+.. ++...++||+|++.--. .+...+...++.++
T Consensus 564 ~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a 643 (703)
T 3v97_A 564 STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDL 643 (703)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHH
Confidence 366779999999999874 443 6677777554 55667899999984311 12223344689999
Q ss_pred HhccCCCcEEEEEcCC
Q 041513 71 DRVLRPGGYWVVSGPP 86 (294)
Q Consensus 71 ~RVLKPGG~~vis~pp 86 (294)
.++|||||+|+++...
T Consensus 644 ~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 644 KRLLRAGGTIMFSNNK 659 (703)
T ss_dssp HHHEEEEEEEEEEECC
T ss_pred HHhcCCCcEEEEEECC
Confidence 9999999999998864
No 234
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.47 E-value=0.0014 Score=54.75 Aligned_cols=56 Identities=18% Similarity=0.069 Sum_probs=38.6
Q ss_pred cEEE-EccCCCCC--------CCCCcccEEEecCcCc---ccccCh-------HHHHHHHHhccCCCcEEEEEcC
Q 041513 30 AMVG-LLSTYQLP--------YPSRSFDVAHCSRCLV---PWTSYD-------GLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 30 ~~~~-v~d~~~LP--------fpd~sFD~V~~s~~l~---h~~~d~-------~~~L~Ei~RVLKPGG~~vis~p 85 (294)
+.+. .+|....+ +++++||+|+|..+++ |+..+. ..+++++.|+|||||.|++...
T Consensus 72 ~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 72 ATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp CEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 4555 55544433 4567899999976542 222222 3789999999999999999864
No 235
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.45 E-value=0.0014 Score=62.38 Aligned_cols=47 Identities=28% Similarity=0.416 Sum_probs=38.7
Q ss_pred CCCCCCCCCcccEEEecCcCcccccChH---------------------------------HHHHHHHhccCCCcEEEEE
Q 041513 37 TYQLPYPSRSFDVAHCSRCLVPWTSYDG---------------------------------LYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 37 ~~~LPfpd~sFD~V~~s~~l~h~~~d~~---------------------------------~~L~Ei~RVLKPGG~~vis 83 (294)
-..-.||+++||+|+++.+| ||..+.. .+|+-..|.|+|||+++++
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSL-MWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCT-TBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhccCCCCceEEEEehhhh-hhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 44568999999999999999 9975421 1378889999999999997
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
.
T Consensus 209 ~ 209 (359)
T 1m6e_X 209 I 209 (359)
T ss_dssp E
T ss_pred E
Confidence 6
No 236
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=96.32 E-value=0.0015 Score=59.48 Aligned_cols=70 Identities=17% Similarity=0.074 Sum_probs=49.2
Q ss_pred eeccCCCcHHHHHHHHHcC----C--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChH-HHH--------------
Q 041513 9 SFAPLDVHEAQVQFALERG----L--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDG-LYL-------------- 67 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----v--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~-~~L-------------- 67 (294)
.+.+.|+++.|++.|+++. . .+.+..+|+..++++ +||+|+++..+ ||..+.. .++
T Consensus 52 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlpy-~~~~~~~~~~l~~~~~~~~~~~m~q 128 (285)
T 1zq9_A 52 KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLPY-QISSPFVFKLLLHRPFFRCAILMFQ 128 (285)
T ss_dssp EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECCG-GGHHHHHHHHHHCSSCCSEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecCc-ccchHHHHHHHhcCcchhhhhhhhh
Confidence 4667799999999998752 2 356777888888776 79999997655 5543221 111
Q ss_pred HHHH--hccCCCcEEE
Q 041513 68 MEID--RVLRPGGYWV 81 (294)
Q Consensus 68 ~Ei~--RVLKPGG~~v 81 (294)
+|+. |+|||||.++
T Consensus 129 kEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 129 REFALRLVAKPGDKLY 144 (285)
T ss_dssp HHHHHHHHCCTTCTTC
T ss_pred HHHHHHHhcCCCCccc
Confidence 4553 7999999873
No 237
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.31 E-value=0.0017 Score=61.50 Aligned_cols=77 Identities=13% Similarity=0.025 Sum_probs=54.7
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCC----CCCcccEEEecCcCc--------ccccChHHHHHHH
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPY----PSRSFDVAHCSRCLV--------PWTSYDGLYLMEI 70 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPf----pd~sFD~V~~s~~l~--------h~~~d~~~~L~Ei 70 (294)
.+.+.|+|+.+++.|+++ ++ .+.+..+|+..+.. ++++||+|++.--.. +...+...++.++
T Consensus 242 ~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~ 321 (396)
T 2as0_A 242 EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAG 321 (396)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 566789999999999874 45 46677777554421 367899999843210 1113344689999
Q ss_pred HhccCCCcEEEEEcC
Q 041513 71 DRVLRPGGYWVVSGP 85 (294)
Q Consensus 71 ~RVLKPGG~~vis~p 85 (294)
.++|||||+++++..
T Consensus 322 ~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 322 LNLVKDGGILVTCSC 336 (396)
T ss_dssp HTTEEEEEEEEEEEC
T ss_pred HHhcCCCcEEEEEEC
Confidence 999999999999875
No 238
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.16 E-value=0.036 Score=46.52 Aligned_cols=70 Identities=10% Similarity=0.058 Sum_probs=51.7
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCccccc-ChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTS-YDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~-d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+|+.|++.|+++ ++.+.+..+|...+| ++||+|++...++++.. ....++.++.++| ||.+++.
T Consensus 74 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 74 EVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 467789999999999875 335677778877764 48999999887744432 2346899999999 6655444
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=95.90 E-value=0.028 Score=51.65 Aligned_cols=101 Identities=15% Similarity=0.074 Sum_probs=65.8
Q ss_pred eccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 10 FAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
+...|+++.|+++++++ |++..+.+.|...-+ +...||+|++.-+++|..+......-++...|+|||.||--..
T Consensus 159 y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 159 YIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp EEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEEC
T ss_pred EEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccc
Confidence 34559999999999875 677777777644333 5677999999999955543332344499999999998875432
Q ss_pred -CCCccccCCCcccChHHHHHHHHHHHHHHHhhce
Q 041513 86 -PISWKTSYRGWERDAKDLQKEQISLENLATRLCW 119 (294)
Q Consensus 86 -p~~~~~~~~~w~~~~e~l~~~~~~le~l~~~lcW 119 (294)
.+.- +++...+..+..++..+....|
T Consensus 238 ksl~G--------rs~gm~~~Y~~~~e~~~~~~g~ 264 (281)
T 3lcv_B 238 KSLGQ--------RSKGMFQNYSQSFESQARERSC 264 (281)
T ss_dssp C---------------CHHHHHHHHHHHHHHHHTC
T ss_pred hhhcC--------CCcchhhHHHHHHHHHHHhcCC
Confidence 1221 2223334455667777766666
No 240
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=95.89 E-value=0.0051 Score=55.82 Aligned_cols=74 Identities=15% Similarity=-0.024 Sum_probs=56.2
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+.+.|+++.|++++++. +.+..+.++|....|++. +||+|++.-+++|..+........+..-|+++|.++-.
T Consensus 128 ~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 128 SVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEc
Confidence 345679999999999875 567778888887777766 89999999888555333334555999999999766543
No 241
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=95.82 E-value=0.013 Score=52.35 Aligned_cols=94 Identities=16% Similarity=-0.033 Sum_probs=65.7
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+++.+++.|+++ ++ .+.+..+|......+++.||+|+.+...-. -...++.+..+.|+++|+|++
T Consensus 47 ~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg~---lI~~IL~~~~~~l~~~~~lIl 123 (230)
T 3lec_A 47 FAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGGR---LIADILNNDIDKLQHVKTLVL 123 (230)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHH---HHHHHHHHTGGGGTTCCEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCchH---HHHHHHHHHHHHhCcCCEEEE
Confidence 567789999999999874 44 366777776666556568999886654411 223688889999999999999
Q ss_pred EcCCCCccccCCCcccChHHHHHHHHHHHHHHHhhceEeeec
Q 041513 83 SGPPISWKTSYRGWERDAKDLQKEQISLENLATRLCWKKIAE 124 (294)
Q Consensus 83 s~pp~~~~~~~~~w~~~~e~l~~~~~~le~l~~~lcW~~v~~ 124 (294)
+..- .. ..+.+.+...+|..+.+
T Consensus 124 qp~~------------~~-------~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 124 QPNN------------RE-------DDLRKWLAANDFEIVAE 146 (230)
T ss_dssp EESS------------CH-------HHHHHHHHHTTEEEEEE
T ss_pred ECCC------------Ch-------HHHHHHHHHCCCEEEEE
Confidence 8741 11 23555566667776654
No 242
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.65 E-value=0.0051 Score=58.87 Aligned_cols=76 Identities=12% Similarity=-0.052 Sum_probs=51.5
Q ss_pred eccCCCcHHHHHHHHHc----CCCcEEEEccCCCC-CCCCCcccEEEecCcCccc--------ccChHHHHHHHHhccCC
Q 041513 10 FAPLDVHEAQVQFALER----GLPAMVGLLSTYQL-PYPSRSFDVAHCSRCLVPW--------TSYDGLYLMEIDRVLRP 76 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~L-Pfpd~sFD~V~~s~~l~h~--------~~d~~~~L~Ei~RVLKP 76 (294)
+...|+|+.|++.|+++ ++...+.++|+... +...+.||+|++.--..+- ..+...++.++.|+|||
T Consensus 239 V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~Lkp 318 (393)
T 4dmg_A 239 ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAE 318 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEE
T ss_pred EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 66789999999999874 56655666775442 2223449999985321010 11223688999999999
Q ss_pred CcEEEEEcC
Q 041513 77 GGYWVVSGP 85 (294)
Q Consensus 77 GG~~vis~p 85 (294)
||+++++..
T Consensus 319 GG~Lv~~s~ 327 (393)
T 4dmg_A 319 EGFLWLSSC 327 (393)
T ss_dssp EEEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999997663
No 243
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=95.60 E-value=0.024 Score=53.97 Aligned_cols=70 Identities=20% Similarity=0.134 Sum_probs=49.1
Q ss_pred cCCCcHHHHHHHHH----cCC--CcEEEEccCCCCCCCCCcccEEEe---cCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 12 PLDVHEAQVQFALE----RGL--PAMVGLLSTYQLPYPSRSFDVAHC---SRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 12 p~D~S~~mlq~A~e----rgv--~~~~~v~d~~~LPfpd~sFD~V~~---s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
+.|.|+ |++.|++ .|+ .+.+...+.+.+.+| ..||+|+| ..++ .+......++....|.|||||.++-
T Consensus 111 ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l-~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 111 AVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGL-LHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp EEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTB-TTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred EEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccccc-cccchhhhHHHHHHhhCCCCceECC
Confidence 445553 6666654 455 366777788888887 57999998 3444 3334455788899999999999886
Q ss_pred Ec
Q 041513 83 SG 84 (294)
Q Consensus 83 s~ 84 (294)
+.
T Consensus 188 ~~ 189 (376)
T 4hc4_A 188 AS 189 (376)
T ss_dssp CE
T ss_pred cc
Confidence 43
No 244
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=95.57 E-value=0.012 Score=54.59 Aligned_cols=68 Identities=7% Similarity=0.054 Sum_probs=52.8
Q ss_pred eeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+|+.+++.|+++ ++ .+.+..+|+.... +.||+|++.--. ....++.++.++|+|||.+++
T Consensus 218 ~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~-----~~~~~l~~~~~~L~~gG~l~~ 289 (336)
T 2yx1_A 218 KIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK-----FAHKFIDKALDIVEEGGVIHY 289 (336)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT-----TGGGGHHHHHHHEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH-----hHHHHHHHHHHHcCCCCEEEE
Confidence 566789999999999874 44 4677777876665 889999985321 123789999999999999998
Q ss_pred Ec
Q 041513 83 SG 84 (294)
Q Consensus 83 s~ 84 (294)
+.
T Consensus 290 ~~ 291 (336)
T 2yx1_A 290 YT 291 (336)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 245
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=95.37 E-value=0.023 Score=51.16 Aligned_cols=74 Identities=14% Similarity=-0.072 Sum_probs=54.6
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+++.+++.|+++ |+. +.+..+|......++..||+|+.+...- +-...+|.+..+.|+++|+|++
T Consensus 47 ~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg---~lI~~IL~~~~~~L~~~~~lIl 123 (244)
T 3gnl_A 47 FAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG---TLIRTILEEGAAKLAGVTKLIL 123 (244)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH---HHHHHHHHHTGGGGTTCCEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCch---HHHHHHHHHHHHHhCCCCEEEE
Confidence 567789999999999875 553 5677777665555555699998765431 1123688899999999999999
Q ss_pred EcC
Q 041513 83 SGP 85 (294)
Q Consensus 83 s~p 85 (294)
+..
T Consensus 124 q~~ 126 (244)
T 3gnl_A 124 QPN 126 (244)
T ss_dssp EES
T ss_pred EcC
Confidence 873
No 246
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=95.29 E-value=0.016 Score=55.79 Aligned_cols=77 Identities=17% Similarity=0.107 Sum_probs=56.6
Q ss_pred eeeccCCCcHHHHHHHHHc----CC---CcEEEEccCCCCCCCCCcccEEEecCcCccc--ccC--------------hH
Q 041513 8 MSFAPLDVHEAQVQFALER----GL---PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPW--TSY--------------DG 64 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv---~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~--~~d--------------~~ 64 (294)
..+.+.|+++.+++.|+.+ |+ ...+.++|+...+.. ..||+|++.--+.+. ... ..
T Consensus 209 ~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~ 287 (445)
T 2okc_A 209 KALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQL 287 (445)
T ss_dssp TTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHH
Confidence 4678889999999999763 55 455666777666654 389999997544321 111 12
Q ss_pred HHHHHHHhccCCCcEEEEEcC
Q 041513 65 LYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 65 ~~L~Ei~RVLKPGG~~vis~p 85 (294)
.++.++.+.|||||++++..|
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhccCCEEEEEEC
Confidence 689999999999999999876
No 247
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=95.25 E-value=0.035 Score=53.55 Aligned_cols=72 Identities=17% Similarity=0.187 Sum_probs=51.2
Q ss_pred eeccCCCcHHHHHHHHHc----CCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 9 SFAPLDVHEAQVQFALER----GLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.|+|+.|++.|+++ ++.+.+..+|+..+.. + +||+|++.--. ......+++.+ +.|+|||.++++.
T Consensus 314 ~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~-~-~fD~Vv~dPPr---~g~~~~~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 314 NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV-K-GFDTVIVDPPR---AGLHPRLVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC-T-TCSEEEECCCT---TCSCHHHHHHH-HHHCCSEEEEEES
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc-c-CCCEEEEcCCc---cchHHHHHHHH-HhcCCCcEEEEEC
Confidence 566789999999999874 4556677788777643 2 89999985432 11122355555 4599999999998
Q ss_pred CC
Q 041513 85 PP 86 (294)
Q Consensus 85 pp 86 (294)
.|
T Consensus 388 ~p 389 (425)
T 2jjq_A 388 NP 389 (425)
T ss_dssp CH
T ss_pred Ch
Confidence 65
No 248
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=95.11 E-value=0.02 Score=48.69 Aligned_cols=56 Identities=11% Similarity=-0.073 Sum_probs=37.6
Q ss_pred CcEEEEccCCCCCCC-----------CCcccEEEecCcCc---ccccC-------hHHHHHHHHhccCCCcEEEEEc
Q 041513 29 PAMVGLLSTYQLPYP-----------SRSFDVAHCSRCLV---PWTSY-------DGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 29 ~~~~~v~d~~~LPfp-----------d~sFD~V~~s~~l~---h~~~d-------~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+.+.++|....+.. .++||+|+|..... ++..+ ...++.++.|+|||||.|++..
T Consensus 63 ~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 63 GVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp TCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 356667777665521 14899999965331 11111 2358899999999999999876
No 249
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=94.41 E-value=0.045 Score=52.21 Aligned_cols=76 Identities=12% Similarity=0.041 Sum_probs=53.8
Q ss_pred eeeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEec--CcCcccc--cChHHHHHHHHhccCC-
Q 041513 8 MSFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCS--RCLVPWT--SYDGLYLMEIDRVLRP- 76 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s--~~l~h~~--~d~~~~L~Ei~RVLKP- 76 (294)
..+.+.|+++.|++.|+++ |+ .+.+.+.|...++.++ +||+|+|. +.. ... .+...+.+++.++||+
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~-~fD~Iv~NPPYg~-rl~~~~~l~~ly~~lg~~lk~~ 341 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTED-EYGVVVANPPYGE-RLEDEEAVRQLYREMGIVYKRM 341 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCC-CSCEEEECCCCCC-SHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCC-CCCEEEECCCCcc-ccCCchhHHHHHHHHHHHHhcC
Confidence 4578889999999999874 55 3778888988888764 89999998 332 111 1223456666677766
Q ss_pred -CcEEEEEcC
Q 041513 77 -GGYWVVSGP 85 (294)
Q Consensus 77 -GG~~vis~p 85 (294)
||.+++...
T Consensus 342 ~g~~~~iit~ 351 (393)
T 3k0b_A 342 PTWSVYVLTS 351 (393)
T ss_dssp TTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 888777654
No 250
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.40 E-value=0.07 Score=47.28 Aligned_cols=93 Identities=17% Similarity=-0.004 Sum_probs=62.1
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccC-CCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLST-YQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~-~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
.+...|+++.+++.|+++ ++. +.+..+|. +.++.. ..||+|+.+..-- .-...++.+..+.|+|+|+|+
T Consensus 41 ~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~Gg---~~i~~Il~~~~~~L~~~~~lV 116 (225)
T 3kr9_A 41 SAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITIAGMGG---RLIARILEEGLGKLANVERLI 116 (225)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEECH---HHHHHHHHHTGGGCTTCCEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC-cCCCEEEEcCCCh---HHHHHHHHHHHHHhCCCCEEE
Confidence 566789999999999874 553 56666664 344332 2699988765431 112368899999999999999
Q ss_pred EEcCCCCccccCCCcccChHHHHHHHHHHHHHHHhhceEeeec
Q 041513 82 VSGPPISWKTSYRGWERDAKDLQKEQISLENLATRLCWKKIAE 124 (294)
Q Consensus 82 is~pp~~~~~~~~~w~~~~e~l~~~~~~le~l~~~lcW~~v~~ 124 (294)
++.. . .. ..+.+.+...+|..+.+
T Consensus 117 lq~~-~-----------~~-------~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 117 LQPN-N-----------RE-------DDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp EEES-S-----------CH-------HHHHHHHHHTTEEEEEE
T ss_pred EECC-C-----------CH-------HHHHHHHHHCCCEEEEE
Confidence 9764 1 11 23445556677876665
No 251
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=94.31 E-value=0.072 Score=51.10 Aligned_cols=74 Identities=19% Similarity=0.136 Sum_probs=52.3
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCC----CCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcE
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQ----LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGY 79 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~----LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~ 79 (294)
.+.+.|+|++|++.|+++ ++ ++.+..+|+.. +|+++++||+|++.--. ..- ..++..+.+ ++|++.
T Consensus 310 ~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr---~g~-~~~~~~l~~-~~p~~i 384 (433)
T 1uwv_A 310 SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPAR---AGA-AGVMQQIIK-LEPIRI 384 (433)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCT---TCC-HHHHHHHHH-HCCSEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCC---ccH-HHHHHHHHh-cCCCeE
Confidence 566789999999999864 44 46777777655 56788899999975322 111 235555543 799999
Q ss_pred EEEEcCCC
Q 041513 80 WVVSGPPI 87 (294)
Q Consensus 80 ~vis~pp~ 87 (294)
++++..|.
T Consensus 385 vyvsc~p~ 392 (433)
T 1uwv_A 385 VYVSCNPA 392 (433)
T ss_dssp EEEESCHH
T ss_pred EEEECChH
Confidence 99998653
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=94.09 E-value=0.085 Score=50.20 Aligned_cols=76 Identities=11% Similarity=0.044 Sum_probs=55.2
Q ss_pred eeeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEec--CcCcccc--cChHHHHHHHHhccCC-
Q 041513 8 MSFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCS--RCLVPWT--SYDGLYLMEIDRVLRP- 76 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s--~~l~h~~--~d~~~~L~Ei~RVLKP- 76 (294)
..+.+.|+++.|++.|+++ |+ .+.+.+.|...++.++ +||+|+|. +.. ... .+...+.+++.++||+
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~-rl~~~~~l~~ly~~lg~~lk~~ 334 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGE-RLLDDKAVDILYNEMGETFAPL 334 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTT-TTSCHHHHHHHHHHHHHHHTTC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhh-ccCCHHHHHHHHHHHHHHHhhC
Confidence 4578889999999999874 55 3677788888888764 89999997 332 111 1233577777778876
Q ss_pred -CcEEEEEcC
Q 041513 77 -GGYWVVSGP 85 (294)
Q Consensus 77 -GG~~vis~p 85 (294)
||.+++..+
T Consensus 335 ~g~~~~iit~ 344 (384)
T 3ldg_A 335 KTWSQFILTN 344 (384)
T ss_dssp TTSEEEEEES
T ss_pred CCcEEEEEEC
Confidence 888887764
No 253
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=94.00 E-value=0.11 Score=47.52 Aligned_cols=56 Identities=14% Similarity=-0.008 Sum_probs=40.5
Q ss_pred CcEEEEccCCCCCCCCCcccEEEecCcCc---ccccChH--HHHHHHHhccCCC-cEEEEEc
Q 041513 29 PAMVGLLSTYQLPYPSRSFDVAHCSRCLV---PWTSYDG--LYLMEIDRVLRPG-GYWVVSG 84 (294)
Q Consensus 29 ~~~~~v~d~~~LPfpd~sFD~V~~s~~l~---h~~~d~~--~~L~Ei~RVLKPG-G~~vis~ 84 (294)
++.....+++...++.+.||+|+|-.+.. ++.+... .+|..+.++|||| |.|++..
T Consensus 123 ~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KV 184 (277)
T 3evf_A 123 NIITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKV 184 (277)
T ss_dssp GGEEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CeEEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 44445555566778889999999987652 2444332 2578889999999 9999976
No 254
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=93.67 E-value=0.17 Score=46.20 Aligned_cols=70 Identities=7% Similarity=0.042 Sum_probs=51.5
Q ss_pred eeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+...|+++.+++.++++ ++. +.+..+|+..++. .+.||.|++..- .....++.+..++|||||.+.+
T Consensus 150 ~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p-----~~~~~~l~~a~~~lk~gG~ih~ 223 (278)
T 3k6r_A 150 KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHY 223 (278)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC-----CcHHHHHHHHHHHcCCCCEEEE
Confidence 355679999999999874 453 5566678777653 678999987632 2234688999999999999876
Q ss_pred Ec
Q 041513 83 SG 84 (294)
Q Consensus 83 s~ 84 (294)
..
T Consensus 224 ~~ 225 (278)
T 3k6r_A 224 HN 225 (278)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 255
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=93.58 E-value=0.00044 Score=61.15 Aligned_cols=75 Identities=9% Similarity=0.038 Sum_probs=52.0
Q ss_pred eeccCCCcHHHHHHHHHcC---CCcEEEEccCCCCCCCC-CcccEEEecCcC-----------cccccChHHHH----HH
Q 041513 9 SFAPLDVHEAQVQFALERG---LPAMVGLLSTYQLPYPS-RSFDVAHCSRCL-----------VPWTSYDGLYL----ME 69 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---v~~~~~v~d~~~LPfpd-~sFD~V~~s~~l-----------~h~~~d~~~~L----~E 69 (294)
.+.+.|+|+.|++.|+++. ..+.+..+|...+++++ ++| .|++..-. .|+ ......+ .+
T Consensus 53 ~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~-~~~~~~lm~q~e~ 130 (245)
T 1yub_A 53 QVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFES-RASDIYLIVEEGF 130 (245)
T ss_dssp EEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSSCHHHHHHHHHHC-CCEEEEEEEESSH
T ss_pred eEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCccccHHHHHHHHhCC-CCCeEEEEeeHHH
Confidence 4677899999999987753 23556677888999884 789 66664211 121 2233455 67
Q ss_pred HHhccCCCcEEEEEcC
Q 041513 70 IDRVLRPGGYWVVSGP 85 (294)
Q Consensus 70 i~RVLKPGG~~vis~p 85 (294)
+.|+|||||.+++..+
T Consensus 131 a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 131 YKRTLDIHRTLGLLLH 146 (245)
T ss_dssp HHHHHCGGGSHHHHTT
T ss_pred HHHHhCCCCchhhhhe
Confidence 9999999999887664
No 256
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.56 E-value=0.07 Score=48.48 Aligned_cols=98 Identities=16% Similarity=0.180 Sum_probs=52.8
Q ss_pred cEEEEccCCC-CC-CCCCcccEEEecCcCc---cc----------------ccChHHHHHHHHhccCCCcEEEEEcCCCC
Q 041513 30 AMVGLLSTYQ-LP-YPSRSFDVAHCSRCLV---PW----------------TSYDGLYLMEIDRVLRPGGYWVVSGPPIS 88 (294)
Q Consensus 30 ~~~~v~d~~~-LP-fpd~sFD~V~~s~~l~---h~----------------~~d~~~~L~Ei~RVLKPGG~~vis~pp~~ 88 (294)
..+.++|... ++ +++++||+|++.==.. .+ ......++.|+.|+|||||.+++......
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~ 101 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVA 101 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEE
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCc
Confidence 4566677443 33 6789999999973221 11 11112477899999999999998764321
Q ss_pred ccccCCCcccChHHHHHHHHHHHHHHHhhceEeeecccceeEeeCCC
Q 041513 89 WKTSYRGWERDAKDLQKEQISLENLATRLCWKKIAERGPIAVWRKPT 135 (294)
Q Consensus 89 ~~~~~~~w~~~~e~l~~~~~~le~l~~~lcW~~v~~~~~~~iw~Kp~ 135 (294)
......+-... ......+..+.+..+|.... ..||.|+.
T Consensus 102 ~~~~~~g~~~~----~~~~~~l~~~~~~~Gf~~~~----~iiW~K~~ 140 (297)
T 2zig_A 102 VARRRFGRHLV----FPLHADIQVRCRKLGFDNLN----PIIWHKHT 140 (297)
T ss_dssp EECC----EEE----ECHHHHHHHHHHHTTCEEEE----EEEEECC-
T ss_pred cccccCCcccc----cccHHHHHHHHHHcCCeeec----cEEEeCCC
Confidence 10000000000 00112344455666776554 36899985
No 257
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.21 E-value=0.15 Score=47.07 Aligned_cols=96 Identities=16% Similarity=0.180 Sum_probs=53.9
Q ss_pred cEEEEccCC-CCC-CCCCcccEEEecC--cCc-----------ccccChHHHHHHHHhccCCCcEEEEEcCCCCccccCC
Q 041513 30 AMVGLLSTY-QLP-YPSRSFDVAHCSR--CLV-----------PWTSYDGLYLMEIDRVLRPGGYWVVSGPPISWKTSYR 94 (294)
Q Consensus 30 ~~~~v~d~~-~LP-fpd~sFD~V~~s~--~l~-----------h~~~d~~~~L~Ei~RVLKPGG~~vis~pp~~~~~~~~ 94 (294)
..+..+|.. .|. +++++||+|++.= ... .|.......|.|+.|+|||||.+++......-...
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~-- 92 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGV-- 92 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTE--
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCC--
Confidence 345556633 243 6789999999872 211 11122446899999999999999997642210000
Q ss_pred CcccChHHHHHHHHHHHHHHHhhceEeeecccceeEeeCCCC
Q 041513 95 GWERDAKDLQKEQISLENLATRLCWKKIAERGPIAVWRKPTN 136 (294)
Q Consensus 95 ~w~~~~e~l~~~~~~le~l~~~lcW~~v~~~~~~~iw~Kp~~ 136 (294)
.. +... ..+.+.++.+..+|.... ..||+|+..
T Consensus 93 ~~-~~~~----~~~~i~~~~~~~Gf~~~~----~iiW~k~~~ 125 (323)
T 1boo_A 93 PA-RSIY----NFRVLIRMIDEVGFFLAE----DFYWFNPSK 125 (323)
T ss_dssp EE-ECCH----HHHHHHHHHHTTCCEEEE----EEEEECSSC
T ss_pred cc-cccc----hHHHHHHHHHhCCCEEEE----EEEEecCCC
Confidence 00 0000 112333455666676553 468998754
No 258
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=92.99 E-value=0.074 Score=48.48 Aligned_cols=49 Identities=16% Similarity=0.199 Sum_probs=33.9
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCCCcccEEEecCcCcccc
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT 60 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~ 60 (294)
.+.+.|+++.|++.|+++ +. .+.+..+|+..++++ +||+|++.... ++.
T Consensus 66 ~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~py-~~~ 119 (299)
T 2h1r_A 66 KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANIPY-KIS 119 (299)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEECCG-GGH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcCCc-ccc
Confidence 567779999999999875 33 456666788777764 89999997665 554
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=92.97 E-value=0.045 Score=52.10 Aligned_cols=76 Identities=16% Similarity=0.133 Sum_probs=50.0
Q ss_pred eeccCCCcHHHHHHHHHcCC-------------CcEEEEccCCCCCC----CCCcccEEEecCcCccccc-----ChHHH
Q 041513 9 SFAPLDVHEAQVQFALERGL-------------PAMVGLLSTYQLPY----PSRSFDVAHCSRCLVPWTS-----YDGLY 66 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv-------------~~~~~v~d~~~LPf----pd~sFD~V~~s~~l~h~~~-----d~~~~ 66 (294)
.+...|+++.+++.|++.-. .+.+.+.|+...-- +++.||+|++-..-.++.. ....+
T Consensus 213 ~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eF 292 (364)
T 2qfm_A 213 MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEF 292 (364)
T ss_dssp EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHH
Confidence 45567999999999998521 24555666443221 3678999997543212211 12356
Q ss_pred HHHH----HhccCCCcEEEEEc
Q 041513 67 LMEI----DRVLRPGGYWVVSG 84 (294)
Q Consensus 67 L~Ei----~RVLKPGG~~vis~ 84 (294)
++++ .|+|+|||.+++-.
T Consensus 293 y~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 293 LRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHhhCCCCcEEEEEc
Confidence 6776 89999999999865
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=92.93 E-value=0.12 Score=49.06 Aligned_cols=77 Identities=12% Similarity=0.065 Sum_probs=55.1
Q ss_pred eeeccCCCcHHHHHHHHHc----CC--CcEEEEccCCCCCCCCCcccEEEecCcCcccc---cChHHHHHHHHhccCC--
Q 041513 8 MSFAPLDVHEAQVQFALER----GL--PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWT---SYDGLYLMEIDRVLRP-- 76 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv--~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~---~d~~~~L~Ei~RVLKP-- 76 (294)
..+.+.|+++.|++.|+++ |+ .+.+.+.|...++.+ .+||+|+|.--+..-. .+...+.+++.++||+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 4678899999999999874 55 367778888888775 4899999964432111 1223577777788887
Q ss_pred CcEEEEEcC
Q 041513 77 GGYWVVSGP 85 (294)
Q Consensus 77 GG~~vis~p 85 (294)
||.+++...
T Consensus 337 g~~~~iit~ 345 (385)
T 3ldu_A 337 NWSYYLITS 345 (385)
T ss_dssp SCEEEEEES
T ss_pred CCEEEEEEC
Confidence 888777653
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=92.50 E-value=0.4 Score=44.03 Aligned_cols=76 Identities=8% Similarity=-0.137 Sum_probs=49.0
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCCCCC---CcccEEEe----c--CcCcc-----c----c-cCh-
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLPYPS---RSFDVAHC----S--RCLVP-----W----T-SYD- 63 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LPfpd---~sFD~V~~----s--~~l~h-----~----~-~d~- 63 (294)
.+...|+++.+++.++++ |+ .+.+...|+..++... ..||.|++ + .++.. | . .+.
T Consensus 129 ~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~ 208 (309)
T 2b9e_A 129 KIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLH 208 (309)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECCCCCC------------------CCHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHH
Confidence 466779999999998864 55 4566677777665432 57999996 2 12211 1 0 111
Q ss_pred ------HHHHHHHHhccCCCcEEEEEcC
Q 041513 64 ------GLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 64 ------~~~L~Ei~RVLKPGG~~vis~p 85 (294)
..+|....+.|+ ||++++++-
T Consensus 209 ~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 209 ALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp HHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred HHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 136777888887 999999874
No 262
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=92.39 E-value=0.24 Score=50.76 Aligned_cols=77 Identities=17% Similarity=0.063 Sum_probs=52.7
Q ss_pred eeeccCCCcHHHHHHHHHc----CCC--cEEEEccCCCC--CCCCCcccEEEec--CcCcccccCh--HH---HHHHHHh
Q 041513 8 MSFAPLDVHEAQVQFALER----GLP--AMVGLLSTYQL--PYPSRSFDVAHCS--RCLVPWTSYD--GL---YLMEIDR 72 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv~--~~~~v~d~~~L--Pfpd~sFD~V~~s--~~l~h~~~d~--~~---~L~Ei~R 72 (294)
..|.+.|+++.|++.|+++ |+. +.+.+.|...+ |+++++||+|+|. +.. .+.... .. .|.++.+
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~-Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGE-RLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC----CCHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccc-cccchhHHHHHHHHHHHHHH
Confidence 4688899999999999874 564 57777887776 5555689999997 333 122111 12 4556666
Q ss_pred ccCCCcEEEEEcC
Q 041513 73 VLRPGGYWVVSGP 85 (294)
Q Consensus 73 VLKPGG~~vis~p 85 (294)
.+.|||.+++..+
T Consensus 336 ~~~~g~~~~ilt~ 348 (703)
T 3v97_A 336 NQFGGWNLSLFSA 348 (703)
T ss_dssp HHCTTCEEEEEES
T ss_pred hhCCCCeEEEEeC
Confidence 6779999888653
No 263
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=91.74 E-value=0.038 Score=51.80 Aligned_cols=73 Identities=21% Similarity=0.233 Sum_probs=48.4
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCc--c--------cccC----------------
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLV--P--------WTSY---------------- 62 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~--h--------~~~d---------------- 62 (294)
.+.+.|+++.+++.| ..+.+.++|....+ +++.||+|++.--+. + ..++
T Consensus 66 ~i~gvDi~~~~~~~a----~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (421)
T 2ih2_A 66 RFVGVEIDPKALDLP----PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKY 140 (421)
T ss_dssp EEEEEESCTTTCCCC----TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTC
T ss_pred eEEEEECCHHHHHhC----CCCcEEeCChhhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCc
Confidence 456677887777766 23556667766554 357899999952111 1 1011
Q ss_pred --hHHHHHHHHhccCCCcEEEEEcCC
Q 041513 63 --DGLYLMEIDRVLRPGGYWVVSGPP 86 (294)
Q Consensus 63 --~~~~L~Ei~RVLKPGG~~vis~pp 86 (294)
...++..+.++|||||++++..|.
T Consensus 141 ~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 141 NLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 114688999999999999998863
No 264
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=91.32 E-value=0.099 Score=51.89 Aligned_cols=78 Identities=18% Similarity=0.159 Sum_probs=55.6
Q ss_pred eeeccCCCcHHHHHHHHHc----CCC------cEEEEccCCCCC-CCCCcccEEEecCcCcc--cc-----------cCh
Q 041513 8 MSFAPLDVHEAQVQFALER----GLP------AMVGLLSTYQLP-YPSRSFDVAHCSRCLVP--WT-----------SYD 63 (294)
Q Consensus 8 ~s~ap~D~S~~mlq~A~er----gv~------~~~~v~d~~~LP-fpd~sFD~V~~s~~l~h--~~-----------~d~ 63 (294)
..+.+.|+++.+++.|+.+ |+. ..+.++|+...+ ++...||+|++.--+.. +. ...
T Consensus 212 ~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~ 291 (541)
T 2ar0_A 212 RAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQ 291 (541)
T ss_dssp TSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHH
T ss_pred ceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchH
Confidence 4688899999999999863 544 456666655443 45678999998643311 11 112
Q ss_pred HHHHHHHHhccCCCcEEEEEcC
Q 041513 64 GLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 64 ~~~L~Ei~RVLKPGG~~vis~p 85 (294)
..++..+.+.|||||++++..|
T Consensus 292 ~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 292 LCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEec
Confidence 2689999999999999999876
No 265
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=90.83 E-value=0.51 Score=41.83 Aligned_cols=21 Identities=10% Similarity=0.047 Sum_probs=18.2
Q ss_pred HHHHHHHHhccCCCcEEEEEc
Q 041513 64 GLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 64 ~~~L~Ei~RVLKPGG~~vis~ 84 (294)
...|.|+.|+|+|||.+++..
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEc
Confidence 358899999999999998874
No 266
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=89.56 E-value=0.28 Score=43.15 Aligned_cols=44 Identities=9% Similarity=0.074 Sum_probs=32.8
Q ss_pred eeccCCCcHHHHHHHHHcC---CCcEEEEccCCCCCCCC-CcccEEEec
Q 041513 9 SFAPLDVHEAQVQFALERG---LPAMVGLLSTYQLPYPS-RSFDVAHCS 53 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---v~~~~~v~d~~~LPfpd-~sFD~V~~s 53 (294)
.+.+.|+++.|++.|+++. -.+.+..+|+..+++++ ..| .|++.
T Consensus 54 ~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~vv~n 101 (244)
T 1qam_A 54 FVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-KIFGN 101 (244)
T ss_dssp EEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-EEEEE
T ss_pred eEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-EEEEe
Confidence 4667899999999998863 24667778899999885 456 44444
No 267
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=89.52 E-value=1.1 Score=41.32 Aligned_cols=72 Identities=19% Similarity=0.304 Sum_probs=49.1
Q ss_pred cCCCcHHHHHHHHHc------C----CCcEEEEcc-CCCCCCCCCcccEEEecCcCccccc----ChHHHHHHHHhccCC
Q 041513 12 PLDVHEAQVQFALER------G----LPAMVGLLS-TYQLPYPSRSFDVAHCSRCLVPWTS----YDGLYLMEIDRVLRP 76 (294)
Q Consensus 12 p~D~S~~mlq~A~er------g----v~~~~~v~d-~~~LPfpd~sFD~V~~s~~l~h~~~----d~~~~L~Ei~RVLKP 76 (294)
-.|+.+++++.|++. + ..+.+...| ..-+--..++||+|+.-..= .... ....+++.+.|.|+|
T Consensus 112 ~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~d-p~~~~~~L~t~eFy~~~~~~L~p 190 (294)
T 3o4f_A 112 MVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTD-PIGPGESLFTSAFYEGCKRCLNP 190 (294)
T ss_dssp EEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCC-CCCTTCCSSCCHHHHHHHHTEEE
T ss_pred EEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCC-cCCCchhhcCHHHHHHHHHHhCC
Confidence 348888999999863 1 235566666 44455567899999864321 1111 113699999999999
Q ss_pred CcEEEEEc
Q 041513 77 GGYWVVSG 84 (294)
Q Consensus 77 GG~~vis~ 84 (294)
||.++.-.
T Consensus 191 ~Gv~v~q~ 198 (294)
T 3o4f_A 191 GGIFVAQN 198 (294)
T ss_dssp EEEEEEEE
T ss_pred CCEEEEec
Confidence 99999854
No 268
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=88.77 E-value=0.17 Score=47.99 Aligned_cols=71 Identities=15% Similarity=0.122 Sum_probs=49.8
Q ss_pred eeccCCCcHHHHHHHHHc-------------------CCC-cEEEEccCCCCCC-CCCcccEEEecCcCcccccChHHHH
Q 041513 9 SFAPLDVHEAQVQFALER-------------------GLP-AMVGLLSTYQLPY-PSRSFDVAHCSRCLVPWTSYDGLYL 67 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er-------------------gv~-~~~~v~d~~~LPf-pd~sFD~V~~s~~l~h~~~d~~~~L 67 (294)
.+...|+++.+++.|+++ ++. +.+...|+..+.. ..+.||+|++- ++. ....++
T Consensus 73 ~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~~~~fD~I~lD----P~~-~~~~~l 147 (378)
T 2dul_A 73 EVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLD----PFG-SPMEFL 147 (378)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEEC----CSS-CCHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhccCCCCEEEeC----CCC-CHHHHH
Confidence 366779999999999863 444 5566666544321 14579999853 211 234789
Q ss_pred HHHHhccCCCcEEEEEc
Q 041513 68 MEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 68 ~Ei~RVLKPGG~~vis~ 84 (294)
..+.+.|||||.++++.
T Consensus 148 ~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 148 DTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcCCCCEEEEEe
Confidence 99999999999988874
No 269
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=88.61 E-value=0.076 Score=61.64 Aligned_cols=43 Identities=16% Similarity=0.281 Sum_probs=16.2
Q ss_pred CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 41 PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 41 Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
+|...+||+|+++.++ |-..+....|.++.++|||||++++..
T Consensus 1306 ~~~~~~ydlvia~~vl-~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1306 PGSLGKADLLVCNCAL-ATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp C-----CCEEEEECC---------------------CCEEEEEE
T ss_pred cCCCCceeEEEEcccc-cccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 5567789999999999 766677789999999999999998865
No 270
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=88.48 E-value=0.48 Score=47.06 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=55.0
Q ss_pred eeeeccCCCcHHHHHHHHHc----CCCcEE--EEccCCCC-CCCCCcccEEEec--CcCccccc----------------
Q 041513 7 TMSFAPLDVHEAQVQFALER----GLPAMV--GLLSTYQL-PYPSRSFDVAHCS--RCLVPWTS---------------- 61 (294)
Q Consensus 7 t~s~ap~D~S~~mlq~A~er----gv~~~~--~v~d~~~L-Pfpd~sFD~V~~s--~~l~h~~~---------------- 61 (294)
...+.+.|+++.+++.|+.+ |+...+ ..+|+... .+++..||+|++. +....|..
T Consensus 283 ~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~ 362 (544)
T 3khk_A 283 QISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGE 362 (544)
T ss_dssp GEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--
T ss_pred hceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccc
Confidence 46789999999999999863 554333 44554433 3567899999995 22211211
Q ss_pred ----------ChHHHHHHHHhccCCCcEEEEEcC
Q 041513 62 ----------YDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 62 ----------d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
..-.++..+.+.|||||++++..|
T Consensus 363 ~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 363 KRILTPPTGNANFAWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccccCCCcchhHHHHHHHHHHhccCceEEEEec
Confidence 011588999999999999999886
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=87.89 E-value=1.4 Score=38.28 Aligned_cols=68 Identities=7% Similarity=-0.083 Sum_probs=45.0
Q ss_pred eeccCCCcHHHHHHHHHc----CC----CcEEEEccCCC---------------CC--------C-CCCcccEEEecCcC
Q 041513 9 SFAPLDVHEAQVQFALER----GL----PAMVGLLSTYQ---------------LP--------Y-PSRSFDVAHCSRCL 56 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv----~~~~~v~d~~~---------------LP--------f-pd~sFD~V~~s~~l 56 (294)
.+.-.|.+++..+.|++. |+ .+.+..+++.. ++ . ..+.||+|+.-.-.
T Consensus 53 ~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k 132 (202)
T 3cvo_A 53 HVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF 132 (202)
T ss_dssp EEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC
Confidence 445567888888888752 44 24555566432 22 2 24789999876532
Q ss_pred cccccChHHHHHHHHhccCCCcEEEE
Q 041513 57 VPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 57 ~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
....+.++.+.|||||.+++
T Consensus 133 ------~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 133 ------RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp ------HHHHHHHHHHHCSSCEEEEE
T ss_pred ------chhHHHHHHHhcCCCeEEEE
Confidence 12667778899999999965
No 272
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=87.21 E-value=0.26 Score=45.99 Aligned_cols=68 Identities=4% Similarity=-0.029 Sum_probs=46.3
Q ss_pred eeccCCCcHHHHHHHHHc----CC-CcEEEEccCCCCC--CCC--------------CcccEEEecCcCcccccChH-HH
Q 041513 9 SFAPLDVHEAQVQFALER----GL-PAMVGLLSTYQLP--YPS--------------RSFDVAHCSRCLVPWTSYDG-LY 66 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv-~~~~~v~d~~~LP--fpd--------------~sFD~V~~s~~l~h~~~d~~-~~ 66 (294)
.+.+.|+|+.+++.|+++ ++ ++.+..+|+..+. +.. ..||+|++. .|. .+
T Consensus 237 ~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~d--------PPr~g~ 308 (369)
T 3bt7_A 237 RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVD--------PPRSGL 308 (369)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEEC--------CCTTCC
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEEC--------cCcccc
Confidence 466779999999999864 45 4667666765431 222 379999753 221 24
Q ss_pred HHHHHhccCCCcEEEEEc
Q 041513 67 LMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 67 L~Ei~RVLKPGG~~vis~ 84 (294)
..++.+.|+|+|.+++..
T Consensus 309 ~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 309 DSETEKMVQAYPRILYIS 326 (369)
T ss_dssp CHHHHHHHTTSSEEEEEE
T ss_pred HHHHHHHHhCCCEEEEEE
Confidence 567888888999887765
No 273
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=87.13 E-value=0.41 Score=42.92 Aligned_cols=52 Identities=12% Similarity=0.093 Sum_probs=32.3
Q ss_pred EEEEccCCC-CCCCCC----cccEEEec-CcCccccc-ChHHHHHHHHhccCCCcEEEE
Q 041513 31 MVGLLSTYQ-LPYPSR----SFDVAHCS-RCLVPWTS-YDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 31 ~~~v~d~~~-LPfpd~----sFD~V~~s-~~l~h~~~-d~~~~L~Ei~RVLKPGG~~vi 82 (294)
.+..+|+.. +|.-+. .||+|+.- +.-..-.+ -...+|.++.|+|||||.|+.
T Consensus 153 ~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 153 DLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 345566443 553332 79999973 22210001 013699999999999999985
No 274
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.71 E-value=0.83 Score=42.14 Aligned_cols=44 Identities=25% Similarity=0.507 Sum_probs=31.2
Q ss_pred CCCCcccEEEecC--cCc--------ccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 42 YPSRSFDVAHCSR--CLV--------PWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 42 fpd~sFD~V~~s~--~l~--------h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
+++++||+|++.= ... .|.......|.|+.|+|+|||.+++...
T Consensus 54 l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 54 LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 5688999999852 110 1111234688899999999999999764
No 275
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=86.56 E-value=1.9 Score=42.81 Aligned_cols=79 Identities=18% Similarity=0.269 Sum_probs=55.7
Q ss_pred eeeeccCCCcHHHHHHHHH----cCCC---cEEEEccCCCC--C-CCCCcccEEEec--CcCccccc-------------
Q 041513 7 TMSFAPLDVHEAQVQFALE----RGLP---AMVGLLSTYQL--P-YPSRSFDVAHCS--RCLVPWTS------------- 61 (294)
Q Consensus 7 t~s~ap~D~S~~mlq~A~e----rgv~---~~~~v~d~~~L--P-fpd~sFD~V~~s--~~l~h~~~------------- 61 (294)
...+.+.|+++.+++.|+. +|+. ..+..+|+... | ++...||+|++. +.. .|..
T Consensus 248 ~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~-~~~~~~~~~~d~rf~~~ 326 (542)
T 3lkd_A 248 TVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSA-KWSASSGFMDDPRFSPF 326 (542)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTC-CCCCCGGGGGSTTTGGG
T ss_pred CceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEEEecCCcCC-ccccchhhhhhhhhhhh
Confidence 3467888999999999976 3552 35666776555 4 567899999986 221 1210
Q ss_pred --------ChHHHHHHHHhccC-CCcEEEEEcCC
Q 041513 62 --------YDGLYLMEIDRVLR-PGGYWVVSGPP 86 (294)
Q Consensus 62 --------d~~~~L~Ei~RVLK-PGG~~vis~pp 86 (294)
..-.++..+.+.|| |||++.+..|.
T Consensus 327 G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 327 GKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp SSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred hhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 01238999999999 99999988863
No 276
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=86.01 E-value=0.56 Score=44.75 Aligned_cols=71 Identities=10% Similarity=0.142 Sum_probs=50.6
Q ss_pred eeccCCCcHHHHHHHHHc----CCC---cEEEEccCCCC-C-CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcE
Q 041513 9 SFAPLDVHEAQVQFALER----GLP---AMVGLLSTYQL-P-YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGY 79 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er----gv~---~~~~v~d~~~L-P-fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~ 79 (294)
.+...|+++.+++.+++. ++. +.+...|+..+ . ...+.||+|++-- +. .+..++..+.+.|+|||+
T Consensus 79 ~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP----~g-~~~~~l~~a~~~Lk~gGl 153 (392)
T 3axs_A 79 KAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP----FG-TPVPFIESVALSMKRGGI 153 (392)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC----SS-CCHHHHHHHHHHEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC----Cc-CHHHHHHHHHHHhCCCCE
Confidence 467789999999999874 553 55666664332 1 1246799998753 11 234689999999999999
Q ss_pred EEEEc
Q 041513 80 WVVSG 84 (294)
Q Consensus 80 ~vis~ 84 (294)
++++.
T Consensus 154 l~~t~ 158 (392)
T 3axs_A 154 LSLTA 158 (392)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88875
No 277
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=82.62 E-value=2 Score=40.37 Aligned_cols=76 Identities=16% Similarity=0.072 Sum_probs=48.5
Q ss_pred eccCCCcHHHHHHHHHc----CC-------CcEEEEccCCCCC-CCCCcccEEE----ecCc---Ccc--------ccc-
Q 041513 10 FAPLDVHEAQVQFALER----GL-------PAMVGLLSTYQLP-YPSRSFDVAH----CSRC---LVP--------WTS- 61 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~er----gv-------~~~~~v~d~~~LP-fpd~sFD~V~----~s~~---l~h--------~~~- 61 (294)
+...|+|+.-++..+++ +. .+.+...|+..++ +..+.||.|+ ||.. ... +..
T Consensus 175 l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~ 254 (359)
T 4fzv_A 175 LAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKK 254 (359)
T ss_dssp EEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHH
T ss_pred EEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHH
Confidence 55679998877766542 22 3455556666553 4568899998 4541 111 110
Q ss_pred -------ChHHHHHHHHhccCCCcEEEEEcC
Q 041513 62 -------YDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 62 -------d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
-...+|....+.|||||+++.|+=
T Consensus 255 ~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 255 ERQILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp HHHTHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 012477788899999999999873
No 278
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=80.08 E-value=1.4 Score=36.16 Aligned_cols=46 Identities=9% Similarity=0.140 Sum_probs=33.0
Q ss_pred CCCCCCCCCcccEEEecCcCc-ccccChHHHHHHHHhccCCCcEEEE
Q 041513 37 TYQLPYPSRSFDVAHCSRCLV-PWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 37 ~~~LPfpd~sFD~V~~s~~l~-h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
....-+|+++||.|+-.---- +...-+..++..+.+.|||||.|..
T Consensus 50 ~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 50 DGSITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp HTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCcccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 455678899999998532111 1122345899999999999999976
No 279
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=78.54 E-value=6.3 Score=35.77 Aligned_cols=87 Identities=13% Similarity=0.085 Sum_probs=52.4
Q ss_pred cEEEEcc-CCCCC-CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcCCCCccccCCCcccChHHHHHHH
Q 041513 30 AMVGLLS-TYQLP-YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGPPISWKTSYRGWERDAKDLQKEQ 107 (294)
Q Consensus 30 ~~~~v~d-~~~LP-fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~pp~~~~~~~~~w~~~~e~l~~~~ 107 (294)
+.+..++ .+.|| ++++.||+|+.=.-. + ..-..+|..+.+.|+|||++++-.- .| | . ...
T Consensus 191 I~li~Gda~etL~~~~~~~~d~vfIDaD~--y-~~~~~~Le~~~p~L~pGGiIv~DD~--~~------~---~----G~~ 252 (282)
T 2wk1_A 191 VRFLPGWFKDTLPTAPIDTLAVLRMDGDL--Y-ESTWDTLTNLYPKVSVGGYVIVDDY--MM------C---P----PCK 252 (282)
T ss_dssp EEEEESCHHHHSTTCCCCCEEEEEECCCS--H-HHHHHHHHHHGGGEEEEEEEEESSC--TT------C---H----HHH
T ss_pred eEEEEeCHHHHHhhCCCCCEEEEEEcCCc--c-ccHHHHHHHHHhhcCCCEEEEEcCC--CC------C---H----HHH
Confidence 5666665 33344 456789999865433 1 1223689999999999999888542 11 1 1 123
Q ss_pred HHHHHHHHhhceEee--ecccceeEeeCC
Q 041513 108 ISLENLATRLCWKKI--AERGPIAVWRKP 134 (294)
Q Consensus 108 ~~le~l~~~lcW~~v--~~~~~~~iw~Kp 134 (294)
+++.+..+...++.. .-....+.|+|+
T Consensus 253 ~Av~Ef~~~~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 253 DAVDEYRAKFDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp HHHHHHHHHTTCCSCCEECSSSCEEEECC
T ss_pred HHHHHHHHhcCCceEEEEecCEEEEEEeC
Confidence 456656555555433 233346788886
No 280
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=78.08 E-value=0.93 Score=41.46 Aligned_cols=48 Identities=4% Similarity=-0.026 Sum_probs=39.4
Q ss_pred eeccCCCcHHHHHHHHHcC---CCcEEEEccCCCCCCCCCcccEEEecCcC
Q 041513 9 SFAPLDVHEAQVQFALERG---LPAMVGLLSTYQLPYPSRSFDVAHCSRCL 56 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---v~~~~~v~d~~~LPfpd~sFD~V~~s~~l 56 (294)
.+...|+++.|++.|+++- -++.+..+|+..+++++..||.|+++.-+
T Consensus 74 ~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 74 KVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVANLPY 124 (295)
T ss_dssp EEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEEECCG
T ss_pred EEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEEEeCcc
Confidence 4566799999999998762 35677888999999999999999988555
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=67.42 E-value=2.4 Score=40.37 Aligned_cols=75 Identities=16% Similarity=0.113 Sum_probs=44.6
Q ss_pred eccCCCcHHHHHHHHHcCC-------------CcEEEEccCCC----CCCCCCcccEEEecCcCcccccC---------h
Q 041513 10 FAPLDVHEAQVQFALERGL-------------PAMVGLLSTYQ----LPYPSRSFDVAHCSRCLVPWTSY---------D 63 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv-------------~~~~~v~d~~~----LPfpd~sFD~V~~s~~l~h~~~d---------~ 63 (294)
+.-.|+.+++++.|++--. .+.+.+.|+.. .+-..+.||+|+.-..-.....+ -
T Consensus 231 V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft 310 (381)
T 3c6k_A 231 VTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFL 310 (381)
T ss_dssp EEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHH
T ss_pred eEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHH
Confidence 3345899999999987410 12344455321 11235689999864221000111 1
Q ss_pred HHHHHHHHhccCCCcEEEEEc
Q 041513 64 GLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 64 ~~~L~Ei~RVLKPGG~~vis~ 84 (294)
..+++.+.|+|+|||.++.-.
T Consensus 311 ~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 311 RLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEec
Confidence 246788999999999998743
No 282
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=64.52 E-value=6.5 Score=35.94 Aligned_cols=53 Identities=11% Similarity=-0.087 Sum_probs=34.9
Q ss_pred EEEEccCCCCCCCCCcccEEEecCcCcc----cccChH--HHHHHHHhccCCC--cEEEEEc
Q 041513 31 MVGLLSTYQLPYPSRSFDVAHCSRCLVP----WTSYDG--LYLMEIDRVLRPG--GYWVVSG 84 (294)
Q Consensus 31 ~~~v~d~~~LPfpd~sFD~V~~s~~l~h----~~~d~~--~~L~Ei~RVLKPG--G~~vis~ 84 (294)
.....++.-..++...+|+|+|-.+. + +.+... .+|.-+.++|||| |.|++-.
T Consensus 141 i~~~~~~dv~~l~~~~~DvVLSDmAp-nsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 141 IRFKDKTDVFNMEVIPGDTLLCDIGE-SSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp EEEECSCCGGGSCCCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EEeeCCcchhhcCCCCcCEEEecCcc-CCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEE
Confidence 33333333345678899999998877 4 222221 2455567899999 9999976
No 283
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=62.11 E-value=2.2 Score=40.93 Aligned_cols=79 Identities=11% Similarity=-0.069 Sum_probs=50.6
Q ss_pred eeccCCCcHHHHHHHHHc------CC-CcEEEEccCCC-CCC-CCCcccEEEecC-------cCcccccChHHHHHHHHh
Q 041513 9 SFAPLDVHEAQVQFALER------GL-PAMVGLLSTYQ-LPY-PSRSFDVAHCSR-------CLVPWTSYDGLYLMEIDR 72 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~er------gv-~~~~~v~d~~~-LPf-pd~sFD~V~~s~-------~l~h~~~d~~~~L~Ei~R 72 (294)
.+...|+|+.|++.|+++ |+ .+.+.++|+.. ++. ++++||+|++.- .-.+..++...-+.++.+
T Consensus 117 ~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPPrr~~~~grv~~led~~P~l~~~~~ 196 (410)
T 3ll7_A 117 QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPARRSGADKRVYAIADCEPDLIPLAT 196 (410)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCEEC-----CCCCGGGEESCHHHHHH
T ss_pred EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCCCcCCCCceEEehhhcCCCHHHHHH
Confidence 566779999999999875 55 46677777665 343 456899999841 121233333356778787
Q ss_pred ccCC-CcEEEEEcCCC
Q 041513 73 VLRP-GGYWVVSGPPI 87 (294)
Q Consensus 73 VLKP-GG~~vis~pp~ 87 (294)
+|+. +..+++-.+|.
T Consensus 197 ~l~~~~~~~~vK~sP~ 212 (410)
T 3ll7_A 197 ELLPFCSSILAKLSPM 212 (410)
T ss_dssp HHGGGSSEEEEEECTT
T ss_pred HHHhhCCcEEEEcCCC
Confidence 6554 55666655543
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=58.90 E-value=7.5 Score=40.81 Aligned_cols=78 Identities=13% Similarity=0.039 Sum_probs=48.5
Q ss_pred eeccCCCcHHHHHHH--HHc--------CCCc-EEEEccCCC-CCCCCCcccEEEecCcCc-cccc--------------
Q 041513 9 SFAPLDVHEAQVQFA--LER--------GLPA-MVGLLSTYQ-LPYPSRSFDVAHCSRCLV-PWTS-------------- 61 (294)
Q Consensus 9 s~ap~D~S~~mlq~A--~er--------gv~~-~~~v~d~~~-LPfpd~sFD~V~~s~~l~-h~~~-------------- 61 (294)
.+.+.|+++.+++.| +.. ++.. .+...+... .+.+...||+|++.==+. .+..
T Consensus 350 ~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g 429 (878)
T 3s1s_A 350 QIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQL 429 (878)
T ss_dssp GEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhh
Confidence 567889999999998 321 2222 333233333 234567899999952221 0100
Q ss_pred ------------C-hHHHHHHHHhccCCCcEEEEEcCC
Q 041513 62 ------------Y-DGLYLMEIDRVLRPGGYWVVSGPP 86 (294)
Q Consensus 62 ------------d-~~~~L~Ei~RVLKPGG~~vis~pp 86 (294)
+ ...++..+.+.|||||++++..|.
T Consensus 430 ~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 430 TGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred ccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 0 123678899999999999998873
No 285
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=58.62 E-value=46 Score=30.58 Aligned_cols=45 Identities=16% Similarity=0.115 Sum_probs=31.0
Q ss_pred CCCCCCCCcccEEEecCcCcccccCh-------HHHHHHHHhccCCC-cEEEEEc
Q 041513 38 YQLPYPSRSFDVAHCSRCLVPWTSYD-------GLYLMEIDRVLRPG-GYWVVSG 84 (294)
Q Consensus 38 ~~LPfpd~sFD~V~~s~~l~h~~~d~-------~~~L~Ei~RVLKPG-G~~vis~ 84 (294)
.-.-++...||+|+|-.+- + .... ..+|.=+.++|+|| |.|++-.
T Consensus 139 di~~l~~~~~DlVlsD~AP-n-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 139 NVFTMPTEPSDTLLCDIGE-S-SSNPLVERDRTMKVLENFERWKHVNTENFCVKV 191 (300)
T ss_dssp CTTTSCCCCCSEEEECCCC-C-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEE
T ss_pred eeeecCCCCcCEEeecCcC-C-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 3334567889999997766 4 2221 12455557899999 9999975
No 286
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=57.76 E-value=10 Score=39.17 Aligned_cols=75 Identities=11% Similarity=0.004 Sum_probs=48.3
Q ss_pred eeeeeccCCCcHHHHHHHHH---cCC--CcEEEEccCCCCCCC-----CCcccEEEecCcCcccccC--hHHHHHHHHhc
Q 041513 6 LTMSFAPLDVHEAQVQFALE---RGL--PAMVGLLSTYQLPYP-----SRSFDVAHCSRCLVPWTSY--DGLYLMEIDRV 73 (294)
Q Consensus 6 ~t~s~ap~D~S~~mlq~A~e---rgv--~~~~~v~d~~~LPfp-----d~sFD~V~~s~~l~h~~~d--~~~~L~Ei~RV 73 (294)
....+...|.++..+..+++ .+. .+.+..++.+.+.+| ...+|+|++=..= .+..+ -...|.-+.|.
T Consensus 445 ~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmG-sfl~nEL~pe~Ld~v~r~ 523 (745)
T 3ua3_A 445 LKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLG-SFGDNELSPECLDGVTGF 523 (745)
T ss_dssp CEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCB-TTBGGGSHHHHHHTTGGG
T ss_pred cccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccc-cccchhccHHHHHHHHHh
Confidence 34456666777654443332 343 367777888888775 6789999975432 22211 23588888999
Q ss_pred cCCCcEEE
Q 041513 74 LRPGGYWV 81 (294)
Q Consensus 74 LKPGG~~v 81 (294)
|||||.++
T Consensus 524 Lkp~Gi~i 531 (745)
T 3ua3_A 524 LKPTTISI 531 (745)
T ss_dssp SCTTCEEE
T ss_pred CCCCcEEE
Confidence 99999865
No 287
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=53.80 E-value=9.8 Score=31.22 Aligned_cols=64 Identities=17% Similarity=0.171 Sum_probs=39.7
Q ss_pred cCCCcHHHHHHHHHcCCCcEEEEccCCCC-----C-CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 12 PLDVHEAQVQFALERGLPAMVGLLSTYQL-----P-YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 12 p~D~S~~mlq~A~ergv~~~~~v~d~~~L-----P-fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
..|.+++.++.+++.|....+ ....... . .....+|+|+.+.. ...+.+..+.|+|||++++.+
T Consensus 68 ~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~~D~vi~~~g--------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 68 TTAGSDAKREMLSRLGVEYVG-DSRSVDFADEILELTDGYGVDVVLNSLA--------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEESSHHHHHHHHTTCCSEEE-ETTCSTHHHHHHHHTTTCCEEEEEECCC--------THHHHHHHHTEEEEEEEEECS
T ss_pred EEeCCHHHHHHHHHcCCCEEe-eCCcHHHHHHHHHHhCCCCCeEEEECCc--------hHHHHHHHHHhccCCEEEEEc
Confidence 346677778777766643322 1111100 0 11246999986532 157899999999999999875
No 288
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=52.14 E-value=22 Score=32.53 Aligned_cols=68 Identities=19% Similarity=0.149 Sum_probs=44.9
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCC--------CCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEE
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQ--------LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWV 81 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~--------LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~v 81 (294)
+...|.+++.++.|++.|....+. ..... ..+..+.||+|+-+-.- ...+.+..+.|++||.++
T Consensus 210 Vi~~~~~~~~~~~a~~lGa~~vi~-~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~-------~~~~~~~~~~l~~~G~vv 281 (370)
T 4ej6_A 210 VILSTRQATKRRLAEEVGATATVD-PSAGDVVEAIAGPVGLVPGGVDVVIECAGV-------AETVKQSTRLAKAGGTVV 281 (370)
T ss_dssp EEEECSCHHHHHHHHHHTCSEEEC-TTSSCHHHHHHSTTSSSTTCEEEEEECSCC-------HHHHHHHHHHEEEEEEEE
T ss_pred EEEECCCHHHHHHHHHcCCCEEEC-CCCcCHHHHHHhhhhccCCCCCEEEECCCC-------HHHHHHHHHHhccCCEEE
Confidence 344578888889998888654331 11111 01223479999854321 268999999999999999
Q ss_pred EEcC
Q 041513 82 VSGP 85 (294)
Q Consensus 82 is~p 85 (294)
+.+.
T Consensus 282 ~~G~ 285 (370)
T 4ej6_A 282 ILGV 285 (370)
T ss_dssp ECSC
T ss_pred EEec
Confidence 9763
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=51.38 E-value=1.3e+02 Score=28.35 Aligned_cols=44 Identities=7% Similarity=-0.041 Sum_probs=31.4
Q ss_pred CcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCC
Q 041513 29 PAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPG 77 (294)
Q Consensus 29 ~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPG 77 (294)
.+.+...|+.....+...||+|+|-.+. ++...+.-+.+.|..|
T Consensus 253 ~V~~~~~d~~~~~~~~~~~D~vvsDm~~-----~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 253 QVTWLREDGFKFRPTRSNISWMVCDMVE-----KPAKVAALMAQWLVNG 296 (375)
T ss_dssp CEEEECSCTTTCCCCSSCEEEEEECCSS-----CHHHHHHHHHHHHHTT
T ss_pred CeEEEeCccccccCCCCCcCEEEEcCCC-----ChHHhHHHHHHHHhcc
Confidence 4566677877777778899999998766 3445666666666555
No 290
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=51.25 E-value=6.9 Score=34.53 Aligned_cols=46 Identities=0% Similarity=-0.122 Sum_probs=33.5
Q ss_pred eccCCCcHHHHHHHHHcCC---CcEEEEccCCCCCCCCC-----cccEEEecCc
Q 041513 10 FAPLDVHEAQVQFALERGL---PAMVGLLSTYQLPYPSR-----SFDVAHCSRC 55 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv---~~~~~v~d~~~LPfpd~-----sFD~V~~s~~ 55 (294)
+...|+++.|++.|+++.- .+.+..+|+..+++++. ..|.|+++.-
T Consensus 46 v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 46 LTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp EEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEEECC
T ss_pred EEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEECCC
Confidence 5678999999999988642 46677788888887643 3466766643
No 291
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=48.68 E-value=13 Score=33.02 Aligned_cols=64 Identities=13% Similarity=0.074 Sum_probs=40.2
Q ss_pred CCCcHHHHHHHHHcCCCcEEEEccCC-CCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 13 LDVHEAQVQFALERGLPAMVGLLSTY-QLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 13 ~D~S~~mlq~A~ergv~~~~~v~d~~-~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.|.+++.++.+++.|....+...+.. ...+..+.+|+|+-+-. ...+.+..+.|+|||+++..+
T Consensus 177 ~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g--------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 177 VSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG--------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC--------HHHHHHHHHTEEEEEEEEECC
T ss_pred EeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC--------cHHHHHHHHHHhcCCEEEEEe
Confidence 35566677777777754433211111 11223457898875321 248999999999999999876
No 292
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=46.87 E-value=6.6 Score=34.74 Aligned_cols=49 Identities=10% Similarity=0.077 Sum_probs=34.9
Q ss_pred eeccCCCcH-------HHHHHHHHc----CC-C-cEEEEccCCCC-C-CCC--CcccEEEecCcCc
Q 041513 9 SFAPLDVHE-------AQVQFALER----GL-P-AMVGLLSTYQL-P-YPS--RSFDVAHCSRCLV 57 (294)
Q Consensus 9 s~ap~D~S~-------~mlq~A~er----gv-~-~~~~v~d~~~L-P-fpd--~sFD~V~~s~~l~ 57 (294)
.+...|+|+ .+++.|+++ ++ + +.+..+|+..+ + +++ ++||+|++.-.+.
T Consensus 107 ~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 107 TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCSEEEECCCC-
T ss_pred EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCccEEEECCCCC
Confidence 466779999 999999764 23 3 66777776553 3 555 7999999976663
No 293
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=45.94 E-value=9.7 Score=34.51 Aligned_cols=63 Identities=17% Similarity=0.125 Sum_probs=40.8
Q ss_pred ccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 11 APLDVHEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 11 ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
...|.+++.++.+++.|....+ .+.+. +.. .||+|+-+-.- + ..+.+..+.|+|||.+++.+.
T Consensus 204 i~~~~~~~~~~~~~~lGa~~v~--~~~~~--~~~-~~D~vid~~g~------~-~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 204 SVFARNEHKKQDALSMGVKHFY--TDPKQ--CKE-ELDFIISTIPT------H-YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp EEECSSSTTHHHHHHTTCSEEE--SSGGG--CCS-CEEEEEECCCS------C-CCHHHHHTTEEEEEEEEECCC
T ss_pred EEEeCCHHHHHHHHhcCCCeec--CCHHH--Hhc-CCCEEEECCCc------H-HHHHHHHHHHhcCCEEEEECC
Confidence 3346666677777777755444 22222 222 79999854332 1 368889999999999999864
No 294
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=44.53 E-value=31 Score=34.85 Aligned_cols=68 Identities=12% Similarity=0.069 Sum_probs=42.0
Q ss_pred eccCCCcHHHHHHHHH----cCC--CcEEEEccCCCCCCCCCcccEEEec---CcCcccccChHHHHHHHHhccCCCcEE
Q 041513 10 FAPLDVHEAQVQFALE----RGL--PAMVGLLSTYQLPYPSRSFDVAHCS---RCLVPWTSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~e----rgv--~~~~~v~d~~~LPfpd~sFD~V~~s---~~l~h~~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
+...+-++ |...|++ .+. .+++..++.+.+.+| ..+|+|++= .++.+ +.-...|.-..|.|||||.+
T Consensus 388 VyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~--E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 388 LYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSELLGSFADN--ELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp EEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCCCBTTBGG--GCHHHHHHHHGGGEEEEEEE
T ss_pred EEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEEcCcccccc--cCCHHHHHHHHHhcCCCcEE
Confidence 33444453 4444443 343 356667788888777 569999973 22211 12225777789999999986
Q ss_pred E
Q 041513 81 V 81 (294)
Q Consensus 81 v 81 (294)
+
T Consensus 464 i 464 (637)
T 4gqb_A 464 I 464 (637)
T ss_dssp E
T ss_pred c
Confidence 4
No 295
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=42.80 E-value=36 Score=30.70 Aligned_cols=69 Identities=10% Similarity=-0.025 Sum_probs=43.6
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCCC------CC---CCcccEEEecCcCcccccChHHHHHHHHhccCCCcEE
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQLP------YP---SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYW 80 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LP------fp---d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~ 80 (294)
+...|.+++.++.+++.|....+...+...+. .. ...||+|+-+-.- ...+.+..+.|+|||++
T Consensus 195 Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g~-------~~~~~~~~~~l~~~G~i 267 (352)
T 1e3j_A 195 VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGN-------EKCITIGINITRTGGTL 267 (352)
T ss_dssp EEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCC-------HHHHHHHHHHSCTTCEE
T ss_pred EEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEECCCC-------HHHHHHHHHHHhcCCEE
Confidence 34457788888888888765333211101110 01 2469999855332 25788999999999999
Q ss_pred EEEcC
Q 041513 81 VVSGP 85 (294)
Q Consensus 81 vis~p 85 (294)
++.+.
T Consensus 268 v~~G~ 272 (352)
T 1e3j_A 268 MLVGM 272 (352)
T ss_dssp EECSC
T ss_pred EEEec
Confidence 98763
No 296
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=41.51 E-value=28 Score=31.71 Aligned_cols=67 Identities=18% Similarity=0.141 Sum_probs=43.5
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCC----C-CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQ----L-PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~----L-Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
+...|.+++.+++|++.|....+. ..... + .+..+.||+|+-+-.- ...+.+..+.|+|||++++.+
T Consensus 218 Vi~~~~~~~~~~~a~~lGa~~vi~-~~~~~~~~~~~~~~~gg~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 218 IIAVDIVESRLELAKQLGATHVIN-SKTQDPVAAIKEITDGGVNFALESTGS-------PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTSCEEEEEECSCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred EEEECCCHHHHHHHHHcCCCEEec-CCccCHHHHHHHhcCCCCcEEEECCCC-------HHHHHHHHHHHhcCCEEEEeC
Confidence 344577888899998888653331 11111 0 1112369999854332 267899999999999999876
No 297
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=41.23 E-value=8 Score=35.21 Aligned_cols=47 Identities=13% Similarity=-0.010 Sum_probs=34.5
Q ss_pred eeccCCCcHHHHHHHHHcC----CCcEEEEccCCCCC--CCC---CcccEEEecCc
Q 041513 9 SFAPLDVHEAQVQFALERG----LPAMVGLLSTYQLP--YPS---RSFDVAHCSRC 55 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg----v~~~~~v~d~~~LP--fpd---~sFD~V~~s~~ 55 (294)
.+.+.|.|+.|++.|+++. ..+.+.+++...++ +++ +.||.|++...
T Consensus 52 ~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 52 RIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEECS
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEEcCc
Confidence 5677899999999998863 34667777777765 222 68999997543
No 298
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=39.80 E-value=16 Score=32.15 Aligned_cols=44 Identities=11% Similarity=0.165 Sum_probs=32.5
Q ss_pred eeccCCCcHHHHHHHHHcC---CCcEEEEccCCCCCCCC----CcccEEEec
Q 041513 9 SFAPLDVHEAQVQFALERG---LPAMVGLLSTYQLPYPS----RSFDVAHCS 53 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg---v~~~~~v~d~~~LPfpd----~sFD~V~~s 53 (294)
.+...|+++.|++.|+++- -.+.+..+|+..+++++ ..|| |+++
T Consensus 53 ~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 53 NLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp EEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEE-EEEE
T ss_pred EEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeE-EEec
Confidence 4566799999999998862 35677788998888864 4577 4443
No 299
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=38.96 E-value=14 Score=33.50 Aligned_cols=67 Identities=10% Similarity=0.106 Sum_probs=43.6
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCC-----C-CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQL-----P-YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~L-----P-fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
+...|.+++.++.|++.|....+. .....+ . .....||+|+-+-.- + ..+.+..+.|+|||+++..
T Consensus 194 Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~t~g~g~D~v~d~~g~------~-~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 194 IFAVGSRKHCCDIALEYGATDIIN-YKNGDIVEQILKATDGKGVDKVVIAGGD------V-HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EEEECCCHHHHHHHHHHTCCEEEC-GGGSCHHHHHHHHTTTCCEEEEEECSSC------T-THHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCHHHHHHHHHhCCceEEc-CCCcCHHHHHHHHcCCCCCCEEEECCCC------h-HHHHHHHHHHhcCCEEEEe
Confidence 334588888889998888654331 111110 0 123469999854322 1 5789999999999999987
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
+
T Consensus 266 G 266 (352)
T 3fpc_A 266 N 266 (352)
T ss_dssp C
T ss_pred c
Confidence 6
No 300
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=38.90 E-value=12 Score=33.43 Aligned_cols=48 Identities=8% Similarity=0.011 Sum_probs=36.6
Q ss_pred eeccCCCcHHHHHHHHHcC--CCcEEEEccCCCCCCCCC-cccEEEecCcC
Q 041513 9 SFAPLDVHEAQVQFALERG--LPAMVGLLSTYQLPYPSR-SFDVAHCSRCL 56 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg--v~~~~~v~d~~~LPfpd~-sFD~V~~s~~l 56 (294)
.+...|+++.|++.++++- ..+.+..+|+..+++++. .||.|+++.-.
T Consensus 70 ~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy 120 (271)
T 3fut_A 70 EVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVANLPY 120 (271)
T ss_dssp CEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEEECS
T ss_pred EEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEecCcc
Confidence 4566799999999998863 356777889988888753 68888877544
No 301
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=37.92 E-value=31 Score=31.51 Aligned_cols=68 Identities=7% Similarity=0.062 Sum_probs=44.5
Q ss_pred eeccCCCcHHHHHHHHHcCCCcEEEEcc-----CCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 9 SFAPLDVHEAQVQFALERGLPAMVGLLS-----TYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~ergv~~~~~v~d-----~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
.+...|.+++.++.+++.|....+...+ ... ...+.+|+|+-+-. ....+.+..+.|+|||.+++.
T Consensus 199 ~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~--~~~~g~Dvvid~~g-------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 199 TVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAA--LGLGAPAFVFSTTH-------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHT--TCSCCEEEEEECSC-------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHH--hcCCCceEEEECCC-------chhhHHHHHHHhcCCCEEEEE
Confidence 3445578888889998877553331100 111 13357998875422 225889999999999999987
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
+.
T Consensus 270 g~ 271 (363)
T 4dvj_A 270 DD 271 (363)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 302
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=37.18 E-value=29 Score=31.42 Aligned_cols=68 Identities=15% Similarity=0.072 Sum_probs=42.4
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEcc--CC----CC-CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEE
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLS--TY----QL-PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVV 82 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d--~~----~L-Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vi 82 (294)
+...|.+++.+++|++.|....+.... .. .+ ....+.||+|+-.-.- ...+.+..++|+|||++++
T Consensus 199 Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 199 VVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGA-------EASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp EEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCC-------HHHHHHHHHHSCTTCEEEE
T ss_pred EEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECCCC-------hHHHHHHHHHhcCCCEEEE
Confidence 334567888888888887653331110 00 00 0001468999854332 2578899999999999998
Q ss_pred Ec
Q 041513 83 SG 84 (294)
Q Consensus 83 s~ 84 (294)
.+
T Consensus 272 ~G 273 (356)
T 1pl8_A 272 VG 273 (356)
T ss_dssp CS
T ss_pred Ee
Confidence 76
No 303
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=37.09 E-value=23 Score=32.74 Aligned_cols=74 Identities=15% Similarity=0.062 Sum_probs=44.8
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCC------CC-CCCcccEEEecCcCccc-------ccChHHHHHHHHhccC
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQL------PY-PSRSFDVAHCSRCLVPW-------TSYDGLYLMEIDRVLR 75 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~L------Pf-pd~sFD~V~~s~~l~h~-------~~d~~~~L~Ei~RVLK 75 (294)
+...|.+++.+++|++.|.. ......... .. ....||+|+-.-.-... ..++...+.+..+.|+
T Consensus 213 Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~ 290 (398)
T 2dph_A 213 VIVGDQNPERLKLLSDAGFE--TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVR 290 (398)
T ss_dssp EEEEESCHHHHHHHHTTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEE
T ss_pred EEEEcCCHHHHHHHHHcCCc--EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHh
Confidence 44457788889999887752 222211111 00 12369999865443110 0112358999999999
Q ss_pred CCcEEEEEcC
Q 041513 76 PGGYWVVSGP 85 (294)
Q Consensus 76 PGG~~vis~p 85 (294)
|||++++.+.
T Consensus 291 ~gG~iv~~G~ 300 (398)
T 2dph_A 291 AGGAIGIPGI 300 (398)
T ss_dssp EEEEEECCSC
T ss_pred cCCEEEEecc
Confidence 9999988763
No 304
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=36.89 E-value=47 Score=33.47 Aligned_cols=68 Identities=15% Similarity=0.169 Sum_probs=43.9
Q ss_pred CCcccEEEecC----cCcccccCh------HHHHHHHHhccCCCcEEEEEcCCCCccccCCCcccChHHHHHHHHHHHHH
Q 041513 44 SRSFDVAHCSR----CLVPWTSYD------GLYLMEIDRVLRPGGYWVVSGPPISWKTSYRGWERDAKDLQKEQISLENL 113 (294)
Q Consensus 44 d~sFD~V~~s~----~l~h~~~d~------~~~L~Ei~RVLKPGG~~vis~pp~~~~~~~~~w~~~~e~l~~~~~~le~l 113 (294)
+..||+|++.- -.||+.+=. ..+-....+.|+|||.+++.+-. +.. +.....+..+
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YG---------yAD-----r~sE~vv~al 284 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYG---------YAD-----RNSEDVVTAL 284 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC---------CCS-----HHHHHHHHHH
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEee---------ccc-----cchHHHHHHH
Confidence 57899999763 444553211 12445788999999999998742 211 2233567888
Q ss_pred HHhhceEeeecc
Q 041513 114 ATRLCWKKIAER 125 (294)
Q Consensus 114 ~~~lcW~~v~~~ 125 (294)
++.+....+.+.
T Consensus 285 aRkF~~~rv~~p 296 (670)
T 4gua_A 285 ARKFVRVSAARP 296 (670)
T ss_dssp HHTEEEEEEECC
T ss_pred HhheeeeeeeCC
Confidence 888877776543
No 305
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=35.34 E-value=24 Score=32.46 Aligned_cols=73 Identities=19% Similarity=0.133 Sum_probs=45.5
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCC-C-----C-CCCCcccEEEecCcCc---------ccccChHHHHHHHHhc
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQ-L-----P-YPSRSFDVAHCSRCLV---------PWTSYDGLYLMEIDRV 73 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~-L-----P-fpd~sFD~V~~s~~l~---------h~~~d~~~~L~Ei~RV 73 (294)
+...|.+++.+++|++.|.. ........ + . .....||+|+-.-.-. |. .++...+.+..++
T Consensus 213 Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~ 289 (398)
T 1kol_A 213 VIVGDLNPARLAHAKAQGFE--IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKH-EAPATVLNSLMQV 289 (398)
T ss_dssp EEEEESCHHHHHHHHHTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGS-BCTTHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHcCCc--EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccc-cchHHHHHHHHHH
Confidence 34457888999999888863 22211111 0 0 1124699998554321 11 2333689999999
Q ss_pred cCCCcEEEEEcC
Q 041513 74 LRPGGYWVVSGP 85 (294)
Q Consensus 74 LKPGG~~vis~p 85 (294)
|++||++++.+.
T Consensus 290 l~~~G~iv~~G~ 301 (398)
T 1kol_A 290 TRVAGKIGIPGL 301 (398)
T ss_dssp EEEEEEEEECSC
T ss_pred HhcCCEEEEecc
Confidence 999999988763
No 306
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=35.33 E-value=20 Score=32.00 Aligned_cols=66 Identities=12% Similarity=-0.024 Sum_probs=42.3
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCC------CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQL------PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~L------Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
+...|.+++.++.+++.|....+. .....+ -.....+|+|+.+-.- ..+.+..+.|+|||++++.
T Consensus 168 Vi~~~~~~~~~~~~~~~Ga~~~~~-~~~~~~~~~~~~~~~~~g~Dvvid~~g~--------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 168 LIGTVSSPEKAAHAKALGAWETID-YSHEDVAKRVLELTDGKKCPVVYDGVGQ--------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp EEEEESSHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTCCEEEEEESSCG--------GGHHHHHTTEEEEEEEEEC
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEe-CCCccHHHHHHHHhCCCCceEEEECCCh--------HHHHHHHHHhcCCCEEEEE
Confidence 334567788888888877543331 111110 0123469999865332 4678899999999999997
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
+
T Consensus 239 g 239 (325)
T 3jyn_A 239 G 239 (325)
T ss_dssp C
T ss_pred e
Confidence 6
No 307
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=34.22 E-value=38 Score=31.04 Aligned_cols=68 Identities=10% Similarity=0.135 Sum_probs=43.3
Q ss_pred CCcccEEEecC----cCccccc--Ch----HHHHHHHHhccCCCcEEEEEcCCCCccccCCCcccChHHHHHHHHHHHHH
Q 041513 44 SRSFDVAHCSR----CLVPWTS--YD----GLYLMEIDRVLRPGGYWVVSGPPISWKTSYRGWERDAKDLQKEQISLENL 113 (294)
Q Consensus 44 d~sFD~V~~s~----~l~h~~~--d~----~~~L~Ei~RVLKPGG~~vis~pp~~~~~~~~~w~~~~e~l~~~~~~le~l 113 (294)
-+.||+|++.. =.||+.+ |- ..+-....+.|+|||.+++.+-.. .. +.....+..+
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGy---------AD-----R~SE~vV~al 274 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGY---------AD-----RTSERVICVL 274 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCC---------CS-----HHHHHHHHHH
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecc---------cc-----cchHHHHHHH
Confidence 37899999863 3445431 11 124457789999999999987422 11 2233567788
Q ss_pred HHhhceEeeecc
Q 041513 114 ATRLCWKKIAER 125 (294)
Q Consensus 114 ~~~lcW~~v~~~ 125 (294)
++......+.+-
T Consensus 275 ARkF~~~rv~~P 286 (324)
T 3trk_A 275 GRKFRSSRALKP 286 (324)
T ss_dssp HTTEEEEEEECC
T ss_pred HhhheeeeeecC
Confidence 887777666553
No 308
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=33.54 E-value=25 Score=31.32 Aligned_cols=65 Identities=11% Similarity=0.117 Sum_probs=39.9
Q ss_pred cCCCcHHHHHHHHHcCCCcEEEEccCCCC-----CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 12 PLDVHEAQVQFALERGLPAMVGLLSTYQL-----PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 12 p~D~S~~mlq~A~ergv~~~~~v~d~~~L-----Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
..|.+++.++.+++.|....+-..+.+.+ ....+.+|+|+.+..- ..+.+..+.|+|||++++.+
T Consensus 175 ~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~--------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 175 GAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG--------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH--------HHHHHHHTTEEEEEEEEECC
T ss_pred EEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh--------HHHHHHHHHHhcCCEEEEEe
Confidence 34667788888866665432211110111 0012469999865431 46889999999999999876
No 309
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=32.94 E-value=24 Score=31.77 Aligned_cols=67 Identities=15% Similarity=0.066 Sum_probs=43.9
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCC-----CC-CCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQL-----PY-PSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~L-----Pf-pd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
+...|.+++.++.+++.|....+.. ...+ .. ....+|+|+-+-.- ...+.+..+.|+|||++++.
T Consensus 199 Vi~~~~~~~~~~~~~~lGa~~~i~~--~~~~~~~v~~~t~g~g~d~v~d~~G~-------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 199 VIAVDLDDDRLALAREVGADAAVKS--GAGAADAIRELTGGQGATAVFDFVGA-------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEEESCHHHHHHHHHTTCSEEEEC--STTHHHHHHHHHGGGCEEEEEESSCC-------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEEcCCHHHHHHHHHcCCCEEEcC--CCcHHHHHHHHhCCCCCeEEEECCCC-------HHHHHHHHHHHhcCCEEEEE
Confidence 4455788888999988886543321 1110 00 12368988754332 25899999999999999997
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
+.
T Consensus 270 G~ 271 (345)
T 3jv7_A 270 GI 271 (345)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 310
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=31.67 E-value=59 Score=28.91 Aligned_cols=66 Identities=11% Similarity=0.061 Sum_probs=41.8
Q ss_pred cCCCcHHHHHHHHHcCCCcEEEEccCCCCC------CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 12 PLDVHEAQVQFALERGLPAMVGLLSTYQLP------YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 12 p~D~S~~mlq~A~ergv~~~~~v~d~~~LP------fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
..|.+++-+++|++.|....+... ....+ -....+|+|+..-.- ...+.+..++|++||.+++.+.
T Consensus 190 ~~~~~~~k~~~a~~lGa~~~i~~~-~~~~~~~~~~~~~~~g~d~v~d~~G~-------~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 190 AIDISSEKLALAKSFGAMQTFNSS-EMSAPQMQSVLRELRFNQLILETAGV-------PQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp EEESCHHHHHHHHHTTCSEEEETT-TSCHHHHHHHHGGGCSSEEEEECSCS-------HHHHHHHHHHCCTTCEEEECCC
T ss_pred EEechHHHHHHHHHcCCeEEEeCC-CCCHHHHHHhhcccCCcccccccccc-------cchhhhhhheecCCeEEEEEec
Confidence 347788888888888865443211 11100 012457777654322 2688899999999999998763
No 311
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=31.63 E-value=22 Score=31.76 Aligned_cols=63 Identities=13% Similarity=0.070 Sum_probs=36.8
Q ss_pred CCcHHHHHHHHHcCCCcEEEEccC--CC-CCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 14 DVHEAQVQFALERGLPAMVGLLST--YQ-LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 14 D~S~~mlq~A~ergv~~~~~v~d~--~~-LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
|.+++.++.+++.|....+...+. +. ..+....+|+|+-+-. . ..+.+..+.|+|||++++.+
T Consensus 182 ~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g------~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 182 TGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG------G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp ESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC------T--HHHHHHHTTEEEEEEEEECC
T ss_pred eCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc------H--HHHHHHHHhhcCCCEEEEEe
Confidence 334445566666664433221111 11 1122346898875432 1 47889999999999999876
No 312
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=31.20 E-value=28 Score=31.15 Aligned_cols=66 Identities=15% Similarity=0.159 Sum_probs=41.8
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCCCC------CCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQLPY------PSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPf------pd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
+...|.+++.++.+++.|....+. .....+ ..+.+|+|+-... ....+.+..+.|+|||++++.
T Consensus 193 Vi~~~~~~~~~~~~~~lGa~~~i~---~~~~~~~~~~~~~~g~~d~vid~~g-------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 193 VAAVDIDDAKLNLARRLGAEVAVN---ARDTDPAAWLQKEIGGAHGVLVTAV-------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EEEEESCHHHHHHHHHTTCSEEEE---TTTSCHHHHHHHHHSSEEEEEESSC-------CHHHHHHHHHHEEEEEEEEEC
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEe---CCCcCHHHHHHHhCCCCCEEEEeCC-------CHHHHHHHHHHhccCCEEEEe
Confidence 344577788888888877544331 111111 0125788864422 136899999999999999987
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
+.
T Consensus 263 G~ 264 (340)
T 3s2e_A 263 GL 264 (340)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 313
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=30.92 E-value=34 Score=31.87 Aligned_cols=41 Identities=15% Similarity=-0.030 Sum_probs=26.0
Q ss_pred CCcccEEEecCcC---ccc-ccC------hHHHHHHHHhccCCCcEEEEEc
Q 041513 44 SRSFDVAHCSRCL---VPW-TSY------DGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 44 d~sFD~V~~s~~l---~h~-~~d------~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
...||+|+|=.+= -+- .+. -+.++.=+.++|+|||.|++-.
T Consensus 167 ~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV 217 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 217 (344)
T ss_dssp SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE
Confidence 4779999975432 110 011 2235555678999999999965
No 314
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=30.61 E-value=47 Score=29.77 Aligned_cols=66 Identities=17% Similarity=0.211 Sum_probs=41.2
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCCCCCC------CcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQLPYPS------RSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPfpd------~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
+...|.+++.++.+++.|....+ +.....+.+ +.+|+|+-+... ...+.+..+.|++||++++.
T Consensus 191 Vi~~~~~~~~~~~~~~lGa~~~~---d~~~~~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 191 VVAVDIGDEKLELAKELGADLVV---NPLKEDAAKFMKEKVGGVHAAVVTAVS-------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEEECSCHHHHHHHHHTTCSEEE---CTTTSCHHHHHHHHHSSEEEEEESSCC-------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEEeCCHHHHHHHHHCCCCEEe---cCCCccHHHHHHHHhCCCCEEEECCCC-------HHHHHHHHHHhhcCCEEEEe
Confidence 34456777788888776654222 211111100 368988755332 25789999999999999987
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
+.
T Consensus 261 g~ 262 (339)
T 1rjw_A 261 GL 262 (339)
T ss_dssp CC
T ss_pred cc
Confidence 63
No 315
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=30.58 E-value=45 Score=30.38 Aligned_cols=67 Identities=13% Similarity=0.105 Sum_probs=41.6
Q ss_pred ccCCCcHHHHHHHHHcCCCcEEEEcc-CCCC-----CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCC-cEEEEE
Q 041513 11 APLDVHEAQVQFALERGLPAMVGLLS-TYQL-----PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPG-GYWVVS 83 (294)
Q Consensus 11 ap~D~S~~mlq~A~ergv~~~~~v~d-~~~L-----Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPG-G~~vis 83 (294)
...|.+++.+++|++.|....+...+ ...+ .+..+.||+|+-+-. .+ ..+.+..+.|+|| |++++.
T Consensus 222 i~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g------~~-~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 222 IGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG------NV-SVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp EEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC------CH-HHHHHHHHTBCTTTCEEEEC
T ss_pred EEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC------CH-HHHHHHHHHhhccCCEEEEE
Confidence 34477777888888777543331110 0110 112236999985432 22 6889999999997 999987
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
+
T Consensus 295 G 295 (378)
T 3uko_A 295 G 295 (378)
T ss_dssp S
T ss_pred c
Confidence 6
No 316
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=30.50 E-value=24 Score=31.38 Aligned_cols=63 Identities=17% Similarity=0.112 Sum_probs=35.6
Q ss_pred CCcHHHHHHHHHcCCCcEEEEccC--CC-CCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 14 DVHEAQVQFALERGLPAMVGLLST--YQ-LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 14 D~S~~mlq~A~ergv~~~~~v~d~--~~-LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
|.+++.++.+++.|....+...+. +. ..+..+.+|+|+-+-.- ..+.+..+.|++||++++.+
T Consensus 181 ~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 181 TGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG--------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp ESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT--------TTHHHHHHTEEEEEEEEECS
T ss_pred ECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH--------HHHHHHHHhhccCCEEEEEe
Confidence 444555666666664432211111 00 11223468988754321 35788899999999999876
No 317
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=30.29 E-value=28 Score=31.63 Aligned_cols=66 Identities=14% Similarity=-0.010 Sum_probs=42.3
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCC-----C-CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQL-----P-YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~L-----P-fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
+...|.+++.++.+++.|....+. .+...+ . .....||+|+-+-.- ..+.+..+.|+|||.+++.
T Consensus 216 Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~~~g~g~D~vid~~g~--------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 216 VIVTSSSREKLDRAFALGADHGIN-RLEEDWVERVYALTGDRGADHILEIAGG--------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp EEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEEEEETTS--------SCHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCchhHHHHHHcCCCEEEc-CCcccHHHHHHHHhCCCCceEEEECCCh--------HHHHHHHHHhhcCCEEEEE
Confidence 334577888888888887654432 111111 0 123469999854331 4678889999999999997
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
+
T Consensus 287 G 287 (363)
T 3uog_A 287 G 287 (363)
T ss_dssp C
T ss_pred e
Confidence 6
No 318
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=29.70 E-value=19 Score=32.44 Aligned_cols=67 Identities=15% Similarity=0.146 Sum_probs=43.6
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEcc----CCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLS----TYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d----~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
+...|.|++.++++++.|....+...+ ...+. ....||+|+-.-.- ...+.+..++|+|||.+++.+
T Consensus 199 Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 199 IVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDLVGT-------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEESSCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEECCCC-------hHHHHHHHHHhhcCCEEEEeC
Confidence 455678888889998887543331111 01111 12369999865332 257899999999999999876
No 319
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=29.60 E-value=43 Score=29.81 Aligned_cols=65 Identities=15% Similarity=0.124 Sum_probs=41.0
Q ss_pred ccCCCcHHHHHHHHHcCCCcEEEEccCCCCC------CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 11 APLDVHEAQVQFALERGLPAMVGLLSTYQLP------YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 11 ap~D~S~~mlq~A~ergv~~~~~v~d~~~LP------fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
...|.+++.++.+++.|....+. .....+. .....||+|+.+-.- ..+.+..+.|+|||.+++.+
T Consensus 177 i~~~~~~~~~~~~~~~ga~~~~~-~~~~~~~~~~~~~~~~~g~D~vid~~g~--------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 177 IAVASTDEKLKIAKEYGAEYLIN-ASKEDILRQVLKFTNGKGVDASFDSVGK--------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEESSHHHHHHHHHTTCSEEEE-TTTSCHHHHHHHHTTTSCEEEEEECCGG--------GGHHHHHHHEEEEEEEEECC
T ss_pred EEEeCCHHHHHHHHHcCCcEEEe-CCCchHHHHHHHHhCCCCceEEEECCCh--------HHHHHHHHHhccCCEEEEEc
Confidence 34466788888888877543331 1111110 113469999865331 46888899999999999976
No 320
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=29.08 E-value=18 Score=32.65 Aligned_cols=68 Identities=18% Similarity=0.159 Sum_probs=42.8
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCC---C-CCCC-CcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQ---L-PYPS-RSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~---L-Pfpd-~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
+...|.+++.++.+++.|....+...+... + .... +.+|+|+.+..- ...+.+..+.|+|||.+++.+
T Consensus 199 Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 199 IIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNS-------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCCC-------HHHHTTGGGGEEEEEEEEECC
T ss_pred EEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHHhcCCCceEEEECCCC-------HHHHHHHHHHHhcCCEEEEEC
Confidence 444577788888888777543332111100 0 1112 479999865332 257889999999999999876
No 321
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=28.76 E-value=72 Score=28.56 Aligned_cols=63 Identities=13% Similarity=0.074 Sum_probs=41.3
Q ss_pred cCCCcHHHHHHHHHcCCCcEEEEccCCCCCC--------CCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 12 PLDVHEAQVQFALERGLPAMVGLLSTYQLPY--------PSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 12 p~D~S~~mlq~A~ergv~~~~~v~d~~~LPf--------pd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
..|.+++.++.+++.|....+ +...-.+ ....+|+|+-+-.. ...+.+..+.|++||+++..
T Consensus 197 ~~~~~~~~~~~~~~~Ga~~~~---~~~~~~~~~~v~~~~~g~g~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 197 VSEPSDFRRELAKKVGADYVI---NPFEEDVVKEVMDITDGNGVDVFLEFSGA-------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EECSCHHHHHHHHHHTCSEEE---CTTTSCHHHHHHHHTTTSCEEEEEECSCC-------HHHHHHHHHHEEEEEEEEEC
T ss_pred EECCCHHHHHHHHHhCCCEEE---CCCCcCHHHHHHHHcCCCCCCEEEECCCC-------HHHHHHHHHHHhcCCEEEEE
Confidence 446778888888877754332 2111111 12369999855332 26789999999999999987
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
+
T Consensus 267 g 267 (348)
T 2d8a_A 267 G 267 (348)
T ss_dssp C
T ss_pred c
Confidence 6
No 322
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=28.62 E-value=30 Score=31.21 Aligned_cols=31 Identities=10% Similarity=0.057 Sum_probs=23.6
Q ss_pred cccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 46 SFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 46 sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.+|+|+-+-.- ..+.+..+.|+|||.+++.+
T Consensus 233 g~D~vid~~g~--------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 233 QPRIFLDAVTG--------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CCCEEEESSCH--------HHHHHHHHHSCTTCEEEECC
T ss_pred CCcEEEECCCC--------hhHHHHHhhhcCCCEEEEEe
Confidence 58888754332 34578899999999999976
No 323
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=28.55 E-value=1.6e+02 Score=27.28 Aligned_cols=58 Identities=21% Similarity=0.289 Sum_probs=36.7
Q ss_pred HHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCccccc-----ChHHHHHHHHhccCCCcEEEEEcC
Q 041513 19 QVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTS-----YDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 19 mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~-----d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
..+..+.+|+.... .. .+..+...||+|+.- +.. .....|.++.+.|+|||.+++.+.
T Consensus 78 ~~~~l~~~~~~~~~--~~--~~~~~~~~~d~v~~~-----~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~ 140 (381)
T 3dmg_A 78 AFRCLTASGLQARL--AL--PWEAAAGAYDLVVLA-----LPAGRGTAYVQASLVAAARALRMGGRLYLAGD 140 (381)
T ss_dssp HHHHHHHTTCCCEE--CC--GGGSCTTCEEEEEEE-----CCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCccc--cC--CccCCcCCCCEEEEE-----CCcchhHHHHHHHHHHHHHhCCCCCEEEEEEc
Confidence 33334456776533 11 122346679998643 321 134688899999999999999884
No 324
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=28.13 E-value=45 Score=30.28 Aligned_cols=68 Identities=13% Similarity=0.006 Sum_probs=41.2
Q ss_pred ccCCCcHHHHHHHHHcCCCcEEEEccC-CCC-----CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCC-cEEEEE
Q 041513 11 APLDVHEAQVQFALERGLPAMVGLLST-YQL-----PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPG-GYWVVS 83 (294)
Q Consensus 11 ap~D~S~~mlq~A~ergv~~~~~v~d~-~~L-----Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPG-G~~vis 83 (294)
...|.+++.++.|++.|....+...+. +.+ .+..+.||+|+-+-.- ...+.+..+.|+|| |++++.
T Consensus 221 i~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~-------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 221 IAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGN-------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp EEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCC-------HHHHHHHHHTBCTTTCEEEEC
T ss_pred EEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCC-------HHHHHHHHHHhhcCCcEEEEE
Confidence 344667777788877775433211110 111 0112368998754322 25789999999999 999987
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
+.
T Consensus 294 G~ 295 (374)
T 1cdo_A 294 GW 295 (374)
T ss_dssp SC
T ss_pred cC
Confidence 63
No 325
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=27.34 E-value=58 Score=29.49 Aligned_cols=68 Identities=15% Similarity=0.080 Sum_probs=41.6
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccC-CCC-----CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCC-cEEEE
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLST-YQL-----PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPG-GYWVV 82 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~-~~L-----Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPG-G~~vi 82 (294)
+...|.+++.++.+++.|....+...+. +.+ .+..+.||+|+-.-.- ...+.+..+.|+|| |++++
T Consensus 218 Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~-------~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 218 IIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGN-------VKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp EEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC-------HHHHHHHHHTBCTTTCEEEE
T ss_pred EEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCc-------HHHHHHHHHhhccCCcEEEE
Confidence 3345667777788877775433211110 111 0112368999754322 25789999999999 99998
Q ss_pred Ec
Q 041513 83 SG 84 (294)
Q Consensus 83 s~ 84 (294)
.+
T Consensus 291 ~G 292 (373)
T 2fzw_A 291 VG 292 (373)
T ss_dssp CS
T ss_pred Ee
Confidence 76
No 326
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=27.15 E-value=14 Score=32.92 Aligned_cols=56 Identities=11% Similarity=0.081 Sum_probs=32.7
Q ss_pred cHHHHHHHHHcCCCcEEEEccCCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 16 HEAQVQFALERGLPAMVGLLSTYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 16 S~~mlq~A~ergv~~~~~v~d~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
|++.++++++.|....+ -+.+.+ .+.||+|+-+-.- ..+.+..+.|+|||+++..+
T Consensus 174 ~~~~~~~~~~lGa~~v~--~d~~~v---~~g~Dvv~d~~g~--------~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 174 ASLSQALAAKRGVRHLY--REPSQV---TQKYFAIFDAVNS--------QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp SSCCHHHHHHHTEEEEE--SSGGGC---CSCEEEEECC---------------TTGGGEEEEEEEEEEC
T ss_pred ChhhHHHHHHcCCCEEE--cCHHHh---CCCccEEEECCCc--------hhHHHHHHHhcCCCEEEEEe
Confidence 55566667666643322 123333 5679998744221 23467789999999999875
No 327
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=26.63 E-value=60 Score=29.44 Aligned_cols=67 Identities=18% Similarity=0.077 Sum_probs=41.1
Q ss_pred ccCCCcHHHHHHHHHcCCCcEEEEccC-CCC-----CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCC-cEEEEE
Q 041513 11 APLDVHEAQVQFALERGLPAMVGLLST-YQL-----PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPG-GYWVVS 83 (294)
Q Consensus 11 ap~D~S~~mlq~A~ergv~~~~~v~d~-~~L-----Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPG-G~~vis 83 (294)
...|.+++.+++|++.|....+...+. +.+ .+..+.||+|+-.-.- ...+.+..+.|+|| |++++.
T Consensus 220 i~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~-------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 220 IGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGR-------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp EEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC-------HHHHHHHHHTBCTTTCEEEEC
T ss_pred EEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCC-------HHHHHHHHHHHhcCCCEEEEE
Confidence 344667777788887775433211110 111 0112369999854322 25789999999999 999987
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
+
T Consensus 293 G 293 (373)
T 1p0f_A 293 G 293 (373)
T ss_dssp C
T ss_pred c
Confidence 6
No 328
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=26.32 E-value=21 Score=32.09 Aligned_cols=32 Identities=28% Similarity=0.131 Sum_probs=23.2
Q ss_pred CcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 45 RSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 45 ~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
..||+|+.+-.- ..+.+..+.|+|||.+++.+
T Consensus 212 ~g~Dvvid~~g~--------~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 212 IGADAAIDSIGG--------PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp SCEEEEEESSCH--------HHHHHHHHTEEEEEEEEECC
T ss_pred CCCcEEEECCCC--------hhHHHHHHHhcCCCEEEEEe
Confidence 468999864332 33455668999999999976
No 329
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=26.31 E-value=15 Score=32.60 Aligned_cols=68 Identities=13% Similarity=0.044 Sum_probs=38.1
Q ss_pred eeccCCCcHHHHHHH-------HHc----C-C--CcEEEEccCCC-CCCCCCcccEEEecCcCcccccChHHHHHHHHhc
Q 041513 9 SFAPLDVHEAQVQFA-------LER----G-L--PAMVGLLSTYQ-LPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRV 73 (294)
Q Consensus 9 s~ap~D~S~~mlq~A-------~er----g-v--~~~~~v~d~~~-LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RV 73 (294)
.+...|.++.+.+.+ +++ + + .+.+..+|... ++.....||+|++--.+ +.. ....++++..|+
T Consensus 112 ~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~lDP~y-~~~-~~saavkk~~~~ 189 (258)
T 2oyr_A 112 RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMF-PHK-QKSALVKKEMRV 189 (258)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEEECCCC-CCC-CC-----HHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEEEcCCC-CCc-ccchHHHHHHHH
Confidence 356678888764333 321 1 2 25566677444 44323469999998777 333 233578888889
Q ss_pred cCCCc
Q 041513 74 LRPGG 78 (294)
Q Consensus 74 LKPGG 78 (294)
||+.|
T Consensus 190 lr~l~ 194 (258)
T 2oyr_A 190 FQSLV 194 (258)
T ss_dssp HHHHS
T ss_pred HHHhh
Confidence 98866
No 330
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=25.99 E-value=36 Score=30.34 Aligned_cols=66 Identities=15% Similarity=0.103 Sum_probs=40.6
Q ss_pred eccCCCcHHHHHHH-HHcCCCcEEEEccCCCC-----CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 10 FAPLDVHEAQVQFA-LERGLPAMVGLLSTYQL-----PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 10 ~ap~D~S~~mlq~A-~ergv~~~~~v~d~~~L-----Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
+...|.+++.++.+ ++.|....+...+ ..+ ....+.+|+|+.+-. ...+.+..+.|++||++++.
T Consensus 177 Vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g--------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 177 VVGIAGGAEKCRFLVEELGFDGAIDYKN-EDLAAGLKRECPKGIDVFFDNVG--------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEESSHHHHHHHHHTTCCSEEEETTT-SCHHHHHHHHCTTCEEEEEESSC--------HHHHHHHHTTEEEEEEEEEC
T ss_pred EEEEeCCHHHHHHHHHHcCCCEEEECCC-HHHHHHHHHhcCCCceEEEECCC--------cchHHHHHHHHhhCCEEEEE
Confidence 33446777788887 6666543321111 110 001246999876433 14789999999999999987
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
+
T Consensus 248 G 248 (336)
T 4b7c_A 248 G 248 (336)
T ss_dssp C
T ss_pred e
Confidence 6
No 331
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=25.68 E-value=86 Score=28.85 Aligned_cols=67 Identities=10% Similarity=0.064 Sum_probs=39.8
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCCCC--------CCCcccEEEecCcCcccccChHHHHHHHHhcc----CCC
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQLPY--------PSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVL----RPG 77 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~LPf--------pd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVL----KPG 77 (294)
+...|.+++.+++|++.|....+ +...-.+ ....+|+|+-+-.- +...+..+.+.| ++|
T Consensus 241 Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~i~~~t~g~g~D~vid~~g~------~~~~~~~~~~~l~~~~~~~ 311 (404)
T 3ip1_A 241 VILSEPSEVRRNLAKELGADHVI---DPTKENFVEAVLDYTNGLGAKLFLEATGV------PQLVWPQIEEVIWRARGIN 311 (404)
T ss_dssp EEEECSCHHHHHHHHHHTCSEEE---CTTTSCHHHHHHHHTTTCCCSEEEECSSC------HHHHHHHHHHHHHHCSCCC
T ss_pred EEEECCCHHHHHHHHHcCCCEEE---cCCCCCHHHHHHHHhCCCCCCEEEECCCC------cHHHHHHHHHHHHhccCCC
Confidence 34457888888888888754333 1111111 22469999854332 212444454455 999
Q ss_pred cEEEEEcC
Q 041513 78 GYWVVSGP 85 (294)
Q Consensus 78 G~~vis~p 85 (294)
|.+++.+.
T Consensus 312 G~iv~~G~ 319 (404)
T 3ip1_A 312 ATVAIVAR 319 (404)
T ss_dssp CEEEECSC
T ss_pred cEEEEeCC
Confidence 99999873
No 332
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=25.33 E-value=66 Score=29.15 Aligned_cols=67 Identities=13% Similarity=0.060 Sum_probs=40.7
Q ss_pred ccCCCcHHHHHHHHHcCCCcEEEEccC-CCC-----CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCC-cEEEEE
Q 041513 11 APLDVHEAQVQFALERGLPAMVGLLST-YQL-----PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPG-GYWVVS 83 (294)
Q Consensus 11 ap~D~S~~mlq~A~ergv~~~~~v~d~-~~L-----Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPG-G~~vis 83 (294)
...|.+++.++.|++.|....+...+. +.+ .+..+.||+|+-.-.- ...+.+..+.|++| |++++.
T Consensus 220 i~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~-------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 220 IGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGR-------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp EEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC-------HHHHHHHHHHBCTTTCEEEEC
T ss_pred EEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCC-------HHHHHHHHHHhhcCCcEEEEe
Confidence 344667777778877775433211110 111 0112368998754322 25789999999999 999987
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
+
T Consensus 293 G 293 (374)
T 2jhf_A 293 G 293 (374)
T ss_dssp S
T ss_pred c
Confidence 6
No 333
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=25.20 E-value=30 Score=30.90 Aligned_cols=35 Identities=9% Similarity=0.090 Sum_probs=28.2
Q ss_pred eccCCCcHHHHHHHHHc-CCCcEEEEccCCCCCCCC
Q 041513 10 FAPLDVHEAQVQFALER-GLPAMVGLLSTYQLPYPS 44 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~er-gv~~~~~v~d~~~LPfpd 44 (294)
+...|+++.|++.|+++ ...+.+.++|+..++|++
T Consensus 71 V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 71 LHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp EEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred EEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 66789999999999887 235677788998888864
No 334
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=25.19 E-value=47 Score=30.19 Aligned_cols=66 Identities=15% Similarity=0.003 Sum_probs=41.2
Q ss_pred ccCCCcHHHHHHHHHcCCCcEEEEccCCCC-----CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 11 APLDVHEAQVQFALERGLPAMVGLLSTYQL-----PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 11 ap~D~S~~mlq~A~ergv~~~~~v~d~~~L-----Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
...|.+++.++.+++.|....+. .....+ ......+|+|+.+-.- ..+.++.+.|++||.+++.+.
T Consensus 192 i~~~~~~~~~~~~~~~Ga~~~~~-~~~~~~~~~~~~~~~~g~D~vid~~g~--------~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 192 IGTCSSDEKSAFLKSLGCDRPIN-YKTEPVGTVLKQEYPEGVDVVYESVGG--------AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEESSHHHHHHHHHTTCSEEEE-TTTSCHHHHHHHHCTTCEEEEEECSCT--------HHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCHHHHHHHHHcCCcEEEe-cCChhHHHHHHHhcCCCCCEEEECCCH--------HHHHHHHHHHhcCCEEEEEeC
Confidence 34466777888888777543321 111110 0012468999865331 578899999999999998763
No 335
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=25.04 E-value=50 Score=29.45 Aligned_cols=66 Identities=12% Similarity=0.021 Sum_probs=40.3
Q ss_pred ccCCCcHHHHHHHH-HcCCCcEEEEccCCCCC-----CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 11 APLDVHEAQVQFAL-ERGLPAMVGLLSTYQLP-----YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 11 ap~D~S~~mlq~A~-ergv~~~~~v~d~~~LP-----fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
...|.+++.++.++ +.|....+-..+...+. ...+.+|+|+.+..- ..+.+..+.|+|||.+++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~--------~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 184 VGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGG--------KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCH--------HHHHHHHTTEEEEEEEEECC
T ss_pred EEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCH--------HHHHHHHHHHhcCCEEEEEc
Confidence 33466778888887 45654332111111110 012468999865331 47889999999999999875
No 336
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=23.35 E-value=35 Score=30.90 Aligned_cols=66 Identities=8% Similarity=-0.003 Sum_probs=41.0
Q ss_pred eccCCCcHHHHHHHHHcCCCcEEEEccCCCC-----CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 10 FAPLDVHEAQVQFALERGLPAMVGLLSTYQL-----PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 10 ~ap~D~S~~mlq~A~ergv~~~~~v~d~~~L-----Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
+...|.+++.++.+++.|....+. .....+ ....+.+|+|+.+-.- ..+.+..+.|+|||.+++.+
T Consensus 195 Vi~~~~~~~~~~~~~~lGa~~~~~-~~~~~~~~~~~~~~~~g~Dvvid~~g~--------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 195 VYATAGSTGKCEACERLGAKRGIN-YRSEDFAAVIKAETGQGVDIILDMIGA--------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEEESSHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHSSCEEEEEESCCG--------GGHHHHHHTEEEEEEEEECC
T ss_pred EEEEeCCHHHHHHHHhcCCCEEEe-CCchHHHHHHHHHhCCCceEEEECCCH--------HHHHHHHHHhccCCEEEEEE
Confidence 334466777888888777543331 111110 0003469999865432 36788899999999999876
No 337
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=23.02 E-value=78 Score=28.69 Aligned_cols=68 Identities=13% Similarity=0.065 Sum_probs=40.9
Q ss_pred ccCCCcHHHHHHHHHcCCCcEEEEccC-CCC-----CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCC-cEEEEE
Q 041513 11 APLDVHEAQVQFALERGLPAMVGLLST-YQL-----PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPG-GYWVVS 83 (294)
Q Consensus 11 ap~D~S~~mlq~A~ergv~~~~~v~d~-~~L-----Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPG-G~~vis 83 (294)
...|.+++.++.|++.|....+...+. +.+ ....+.||+|+-+-.- ...+.+..+.|++| |++++.
T Consensus 224 i~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~-------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 224 IAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT-------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp EEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCC-------HHHHHHHHHTBCTTTCEEEEC
T ss_pred EEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCC-------HHHHHHHHHHhhcCCCEEEEE
Confidence 334667777788877775433211110 110 0112368998754322 26789999999999 999987
Q ss_pred cC
Q 041513 84 GP 85 (294)
Q Consensus 84 ~p 85 (294)
+.
T Consensus 297 G~ 298 (376)
T 1e3i_A 297 GA 298 (376)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 338
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=22.65 E-value=43 Score=30.26 Aligned_cols=62 Identities=15% Similarity=0.137 Sum_probs=38.1
Q ss_pred CCCcHH---HHHHHHHcCCCcEEEEccCCCCCCC-----CCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 13 LDVHEA---QVQFALERGLPAMVGLLSTYQLPYP-----SRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 13 ~D~S~~---mlq~A~ergv~~~~~v~d~~~LPfp-----d~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
.|.+++ .++++++.|.... +...-.+. .+.||+|+-+-.- ...+.+..++|+|||+++..+
T Consensus 205 ~~~~~~~~~~~~~~~~lGa~~v----~~~~~~~~~i~~~~gg~Dvvid~~g~-------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 205 LGRRDRPDPTIDIIEELDATYV----DSRQTPVEDVPDVYEQMDFIYEATGF-------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EECCCSSCHHHHHHHHTTCEEE----ETTTSCGGGHHHHSCCEEEEEECSCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred EeCCcccHHHHHHHHHcCCccc----CCCccCHHHHHHhCCCCCEEEECCCC-------hHHHHHHHHHHhcCCEEEEEe
Confidence 344555 6777877775322 21111111 2368999754322 157899999999999999876
Q ss_pred C
Q 041513 85 P 85 (294)
Q Consensus 85 p 85 (294)
.
T Consensus 274 ~ 274 (357)
T 2b5w_A 274 V 274 (357)
T ss_dssp C
T ss_pred C
Confidence 3
No 339
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=22.46 E-value=17 Score=33.42 Aligned_cols=64 Identities=19% Similarity=0.185 Sum_probs=38.5
Q ss_pred cCCCcHHHHHHHHHcCCCcEEEEcc---CCCCCCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEcC
Q 041513 12 PLDVHEAQVQFALERGLPAMVGLLS---TYQLPYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSGP 85 (294)
Q Consensus 12 p~D~S~~mlq~A~ergv~~~~~v~d---~~~LPfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~p 85 (294)
..|.+++.++.|++.|....+...+ .+.+. +.||+|+-.-.- + ..+.+..+.|+|||.++..+.
T Consensus 223 ~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~~g~------~-~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 223 AFTTSEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFILNTVAA------P-HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEECCSS------C-CCHHHHHTTEEEEEEEEECCC
T ss_pred EEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEECCCC------H-HHHHHHHHHhccCCEEEEecc
Confidence 3455666677777666543321111 11121 468999855332 1 357888999999999998763
No 340
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=22.09 E-value=47 Score=30.00 Aligned_cols=64 Identities=16% Similarity=0.098 Sum_probs=39.7
Q ss_pred cCCCcHHHHHHHHHcCCCcEEEEccCCCC------CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 12 PLDVHEAQVQFALERGLPAMVGLLSTYQL------PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 12 p~D~S~~mlq~A~ergv~~~~~v~d~~~L------Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
..|.+++.++.+++.|....+. ...... -.....+|+|+.+..- ..+.+..++|++||.+++.+
T Consensus 192 ~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~~G~--------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 192 VTAGSQKKLQMAEKLGAAAGFN-YKKEDFSEATLKFTKGAGVNLILDCIGG--------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTSCEEEEEESSCG--------GGHHHHHHHEEEEEEEEECC
T ss_pred EEeCCHHHHHHHHHcCCcEEEe-cCChHHHHHHHHHhcCCCceEEEECCCc--------hHHHHHHHhccCCCEEEEEe
Confidence 3466778888887766543321 111100 0112469999865432 35778899999999999876
No 341
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=21.47 E-value=53 Score=29.06 Aligned_cols=65 Identities=17% Similarity=-0.007 Sum_probs=39.9
Q ss_pred cCCCcHHHHHHHHHcCCCcEEEEccCC---CC--CCCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEEc
Q 041513 12 PLDVHEAQVQFALERGLPAMVGLLSTY---QL--PYPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 12 p~D~S~~mlq~A~ergv~~~~~v~d~~---~L--Pfpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis~ 84 (294)
..|.+++.++.+++.|....+...+.. .+ -.....+|+|+.+.. ...+.+..+.|++||++++.+
T Consensus 170 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g--------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 170 GTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG--------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC--------GGGHHHHHHTEEEEEEEEECC
T ss_pred EEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc--------hHHHHHHHHHhcCCCEEEEEe
Confidence 346677778888776654332111100 00 011236999986533 257889999999999999876
No 342
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=20.99 E-value=62 Score=29.86 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=27.8
Q ss_pred CcccEEEecCc----Ccccc--cCh----HHHHHHHHhccCCCcEEEEEc
Q 041513 45 RSFDVAHCSRC----LVPWT--SYD----GLYLMEIDRVLRPGGYWVVSG 84 (294)
Q Consensus 45 ~sFD~V~~s~~----l~h~~--~d~----~~~L~Ei~RVLKPGG~~vis~ 84 (294)
+.+|+|++-.. -||+. .|- ..++.-..++|+|||.|+.-.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kv 254 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIG 254 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 56999998653 33322 222 126677889999999999976
No 343
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=20.95 E-value=1.5e+02 Score=25.62 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=29.3
Q ss_pred eeccCCCcHHHHHHHHHcC-CCcEEEEccCCCCCCCCC
Q 041513 9 SFAPLDVHEAQVQFALERG-LPAMVGLLSTYQLPYPSR 45 (294)
Q Consensus 9 s~ap~D~S~~mlq~A~erg-v~~~~~v~d~~~LPfpd~ 45 (294)
.+.+.|+++.|++.++++. ..+.+..+|+..+++++.
T Consensus 56 ~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~ 93 (249)
T 3ftd_A 56 KLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSL 93 (249)
T ss_dssp EEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGS
T ss_pred eEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHc
Confidence 4667899999999998872 245777789999998763
No 344
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=20.56 E-value=38 Score=30.71 Aligned_cols=62 Identities=16% Similarity=0.177 Sum_probs=39.3
Q ss_pred cCCCcHHHHHHHHHcCCCcEEEEccCCCCC--------CCCCcccEEEecCcCcccccChHHHHHHHHhccCCCcEEEEE
Q 041513 12 PLDVHEAQVQFALERGLPAMVGLLSTYQLP--------YPSRSFDVAHCSRCLVPWTSYDGLYLMEIDRVLRPGGYWVVS 83 (294)
Q Consensus 12 p~D~S~~mlq~A~ergv~~~~~v~d~~~LP--------fpd~sFD~V~~s~~l~h~~~d~~~~L~Ei~RVLKPGG~~vis 83 (294)
..|.+++.++.+++.|....+ +..... .....+|+|+.+.. ...+.+..++|+|||++++.
T Consensus 200 ~~~~~~~~~~~~~~~ga~~~~---d~~~~~~~~~~~~~~~~~~~D~vi~~~G--------~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 200 GTAGTEEGQKIVLQNGAHEVF---NHREVNYIDKIKKYVGEKGIDIIIEMLA--------NVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp EEESSHHHHHHHHHTTCSEEE---ETTSTTHHHHHHHHHCTTCEEEEEESCH--------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEeCChhHHHHHHHcCCCEEE---eCCCchHHHHHHHHcCCCCcEEEEECCC--------hHHHHHHHHhccCCCEEEEE
Confidence 346677777777776654322 111111 11236899876533 14678889999999999987
Q ss_pred c
Q 041513 84 G 84 (294)
Q Consensus 84 ~ 84 (294)
+
T Consensus 269 g 269 (351)
T 1yb5_A 269 G 269 (351)
T ss_dssp C
T ss_pred e
Confidence 6
No 345
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=20.39 E-value=28 Score=27.19 Aligned_cols=10 Identities=30% Similarity=0.488 Sum_probs=6.0
Q ss_pred cccCcchhHh
Q 041513 246 MNAGLGGFAA 255 (294)
Q Consensus 246 MnA~~GGFAA 255 (294)
|+++|||+.|
T Consensus 1 m~~~~g~~~~ 10 (107)
T 1ytz_T 1 MGASYSSYLA 10 (107)
T ss_dssp ---CCTTHHH
T ss_pred CCcchhhHHH
Confidence 8999999875
Done!