Query 041517
Match_columns 327
No_of_seqs 214 out of 1416
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 13:21:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041517.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041517hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wk1_A NOVP; transferase, O-me 99.9 1.1E-22 3.7E-27 191.5 13.5 166 142-314 89-268 (282)
2 3dr5_A Putative O-methyltransf 99.8 3.1E-21 1.1E-25 174.5 9.3 154 142-322 40-210 (221)
3 3r3h_A O-methyltransferase, SA 99.8 1.9E-20 6.4E-25 171.4 13.1 153 142-321 47-216 (242)
4 3tos_A CALS11; methyltransfera 99.8 4.1E-19 1.4E-23 164.9 14.6 155 155-314 69-243 (257)
5 1sui_A Caffeoyl-COA O-methyltr 99.8 1.1E-18 3.6E-23 160.2 15.2 122 142-290 66-193 (247)
6 3c3y_A Pfomt, O-methyltransfer 99.8 1.1E-18 3.7E-23 158.8 13.5 153 142-321 57-232 (237)
7 3duw_A OMT, O-methyltransferas 99.8 3.9E-19 1.3E-23 158.4 9.3 194 81-322 5-219 (223)
8 3tfw_A Putative O-methyltransf 99.8 2.1E-18 7.2E-23 157.7 12.8 144 142-312 50-205 (248)
9 3u81_A Catechol O-methyltransf 99.7 4.8E-18 1.6E-22 151.9 11.1 140 142-311 45-190 (221)
10 3cvo_A Methyltransferase-like 99.7 3.8E-18 1.3E-22 153.2 10.0 127 142-303 19-170 (202)
11 3cbg_A O-methyltransferase; cy 99.7 4.4E-18 1.5E-22 153.9 10.1 123 142-291 59-186 (232)
12 3tr6_A O-methyltransferase; ce 99.7 1.3E-17 4.4E-22 148.5 11.3 154 142-322 51-221 (225)
13 3ntv_A MW1564 protein; rossman 99.7 3.6E-17 1.2E-21 147.8 13.6 121 142-290 58-179 (232)
14 2avd_A Catechol-O-methyltransf 99.7 6.9E-17 2.4E-21 144.1 14.0 153 142-321 56-225 (229)
15 3c3p_A Methyltransferase; NP_9 99.7 6.4E-17 2.2E-21 143.1 11.5 122 142-291 43-164 (210)
16 2hnk_A SAM-dependent O-methylt 99.6 3E-15 1E-19 135.2 13.4 153 142-321 47-227 (239)
17 2bm8_A Cephalosporin hydroxyla 99.6 6.8E-15 2.3E-19 133.9 12.2 136 142-309 68-208 (236)
18 2gpy_A O-methyltransferase; st 99.5 2.2E-14 7.4E-19 128.7 10.3 122 142-291 41-164 (233)
19 3mti_A RRNA methylase; SAM-dep 99.4 1.6E-12 5.6E-17 111.9 11.8 126 155-309 22-157 (185)
20 3e05_A Precorrin-6Y C5,15-meth 99.4 6.9E-12 2.4E-16 109.9 15.9 126 153-313 38-163 (204)
21 3hm2_A Precorrin-6Y C5,15-meth 99.4 4.9E-12 1.7E-16 107.5 12.7 124 155-313 25-148 (178)
22 3njr_A Precorrin-6Y methylase; 99.4 9.7E-12 3.3E-16 110.2 14.6 123 153-313 53-175 (204)
23 3orh_A Guanidinoacetate N-meth 99.4 8E-13 2.7E-17 119.8 7.2 122 137-289 42-172 (236)
24 3p9n_A Possible methyltransfer 99.4 7.3E-12 2.5E-16 108.6 13.0 117 146-290 33-156 (189)
25 4hg2_A Methyltransferase type 99.3 2.6E-12 8.9E-17 118.7 10.1 126 145-306 28-154 (257)
26 2esr_A Methyltransferase; stru 99.3 4.8E-12 1.6E-16 108.2 9.9 118 146-290 22-141 (177)
27 3fpf_A Mtnas, putative unchara 99.3 5.5E-12 1.9E-16 119.2 11.1 107 150-289 117-224 (298)
28 3eey_A Putative rRNA methylase 99.3 9.6E-12 3.3E-16 108.1 11.2 129 155-308 22-160 (197)
29 3jwg_A HEN1, methyltransferase 99.3 2.3E-11 8E-16 107.4 12.6 147 146-316 20-190 (219)
30 1xdz_A Methyltransferase GIDB; 99.3 3.3E-11 1.1E-15 108.7 12.9 126 155-313 70-197 (240)
31 3jwh_A HEN1; methyltransferase 99.3 5.5E-11 1.9E-15 105.0 13.9 147 146-316 20-190 (217)
32 3sso_A Methyltransferase; macr 99.3 9.3E-12 3.2E-16 122.2 9.7 110 145-290 204-327 (419)
33 2fhp_A Methylase, putative; al 99.3 1.5E-11 5.1E-16 105.3 9.9 110 154-290 43-157 (187)
34 4gek_A TRNA (CMO5U34)-methyltr 99.3 3.1E-11 1.1E-15 111.6 12.5 119 145-290 58-181 (261)
35 1dus_A MJ0882; hypothetical pr 99.3 5E-11 1.7E-15 101.9 13.0 137 154-324 51-191 (194)
36 3f4k_A Putative methyltransfer 99.3 9.8E-12 3.4E-16 112.1 9.0 108 155-290 46-153 (257)
37 2ift_A Putative methylase HI07 99.3 2.8E-11 9.5E-16 106.8 11.2 118 146-290 44-166 (201)
38 1l3i_A Precorrin-6Y methyltran 99.3 6.7E-11 2.3E-15 100.9 13.2 126 152-313 30-155 (192)
39 2o07_A Spermidine synthase; st 99.2 2.2E-11 7.6E-16 115.1 10.3 112 154-289 94-211 (304)
40 2b2c_A Spermidine synthase; be 99.2 3.1E-11 1E-15 114.8 10.9 111 154-288 107-223 (314)
41 2fpo_A Methylase YHHF; structu 99.2 4.2E-11 1.4E-15 105.7 11.1 109 154-290 53-163 (202)
42 3bus_A REBM, methyltransferase 99.2 1.6E-10 5.5E-15 105.1 14.6 118 145-290 48-169 (273)
43 2frn_A Hypothetical protein PH 99.2 3.3E-11 1.1E-15 111.9 9.8 133 150-314 119-253 (278)
44 3kr9_A SAM-dependent methyltra 99.2 6.1E-11 2.1E-15 107.9 11.3 133 147-314 6-139 (225)
45 4htf_A S-adenosylmethionine-de 99.2 4.7E-11 1.6E-15 109.9 10.6 106 156-289 69-175 (285)
46 1nkv_A Hypothetical protein YJ 99.2 2.5E-11 8.5E-16 109.4 8.4 108 154-290 35-143 (256)
47 3adn_A Spermidine synthase; am 99.2 6.4E-11 2.2E-15 111.5 11.3 131 154-307 82-218 (294)
48 3kkz_A Uncharacterized protein 99.2 2.1E-11 7.2E-16 111.2 7.6 108 155-290 46-153 (267)
49 3dxy_A TRNA (guanine-N(7)-)-me 99.2 5.9E-11 2E-15 106.6 10.3 105 155-286 34-149 (218)
50 3lbf_A Protein-L-isoaspartate 99.2 5.2E-11 1.8E-15 104.5 9.6 101 152-287 74-174 (210)
51 1ws6_A Methyltransferase; stru 99.2 5E-11 1.7E-15 100.3 9.1 105 155-290 41-150 (171)
52 1ixk_A Methyltransferase; open 99.2 1.7E-10 5.8E-15 109.2 13.7 141 145-314 108-271 (315)
53 1iy9_A Spermidine synthase; ro 99.2 8.3E-11 2.8E-15 109.4 11.2 112 154-289 74-191 (275)
54 3mb5_A SAM-dependent methyltra 99.2 6.9E-11 2.4E-15 106.9 10.4 113 146-289 84-196 (255)
55 3dlc_A Putative S-adenosyl-L-m 99.2 3.1E-10 1.1E-14 98.9 13.9 117 146-290 32-151 (219)
56 3lpm_A Putative methyltransfer 99.2 1.5E-10 5.1E-15 105.7 12.2 140 141-313 34-196 (259)
57 3e8s_A Putative SAM dependent 99.2 1.3E-10 4.6E-15 101.8 11.5 133 146-314 44-205 (227)
58 3h2b_A SAM-dependent methyltra 99.2 1.1E-10 3.9E-15 101.6 10.8 134 145-314 32-178 (203)
59 3dh0_A SAM dependent methyltra 99.2 1.2E-10 4.2E-15 102.4 11.1 144 142-313 25-176 (219)
60 1xj5_A Spermidine synthase 1; 99.2 1.2E-10 4E-15 111.7 11.6 113 154-290 119-239 (334)
61 3hnr_A Probable methyltransfer 99.2 1.9E-10 6.4E-15 101.3 12.0 144 144-324 35-210 (220)
62 2igt_A SAM dependent methyltra 99.2 2.4E-10 8.1E-15 109.3 13.3 131 155-313 153-299 (332)
63 2pt6_A Spermidine synthase; tr 99.2 1.9E-10 6.7E-15 109.4 12.5 127 154-304 115-247 (321)
64 4df3_A Fibrillarin-like rRNA/T 99.2 1.7E-10 5.6E-15 105.6 11.5 128 156-313 78-212 (233)
65 3evz_A Methyltransferase; NYSG 99.2 4.1E-10 1.4E-14 100.0 13.5 127 155-314 55-202 (230)
66 1vl5_A Unknown conserved prote 99.2 1.3E-10 4.4E-15 105.4 10.4 109 152-290 34-143 (260)
67 3lec_A NADB-rossmann superfami 99.1 1.8E-10 6E-15 105.2 11.2 133 147-314 12-145 (230)
68 3g89_A Ribosomal RNA small sub 99.1 1.5E-10 5.2E-15 106.0 10.8 125 155-312 80-206 (249)
69 1xxl_A YCGJ protein; structura 99.1 2E-10 6.9E-15 103.2 11.3 110 151-290 17-127 (239)
70 2yxd_A Probable cobalt-precorr 99.1 8.4E-10 2.9E-14 93.4 14.4 122 152-314 32-153 (183)
71 4dmg_A Putative uncharacterize 99.1 5.5E-10 1.9E-14 109.3 15.1 136 150-315 208-354 (393)
72 1uir_A Polyamine aminopropyltr 99.1 1.2E-10 4.2E-15 110.2 10.0 110 154-287 76-195 (314)
73 1inl_A Spermidine synthase; be 99.1 2.1E-10 7.2E-15 107.7 11.5 130 154-307 89-225 (296)
74 3thr_A Glycine N-methyltransfe 99.1 1.1E-10 3.7E-15 107.6 9.1 120 145-289 47-177 (293)
75 3gjy_A Spermidine synthase; AP 99.1 4.6E-10 1.6E-14 107.0 13.7 125 157-309 91-221 (317)
76 1zx0_A Guanidinoacetate N-meth 99.1 8.3E-11 2.8E-15 105.6 8.0 115 146-289 49-172 (236)
77 3lcc_A Putative methyl chlorid 99.1 1.3E-10 4.3E-15 103.9 9.1 129 155-313 66-202 (235)
78 3m4x_A NOL1/NOP2/SUN family pr 99.1 2.6E-10 8.9E-15 113.7 12.3 142 145-314 95-259 (456)
79 1mjf_A Spermidine synthase; sp 99.1 2.7E-10 9.1E-15 106.1 11.5 117 153-288 73-194 (281)
80 3bwc_A Spermidine synthase; SA 99.1 4.2E-10 1.4E-14 106.0 12.8 134 154-311 94-233 (304)
81 3hem_A Cyclopropane-fatty-acyl 99.1 3E-10 1E-14 105.6 11.6 115 145-290 59-186 (302)
82 2b78_A Hypothetical protein SM 99.1 9.3E-10 3.2E-14 107.0 15.6 131 154-311 211-355 (385)
83 3vc1_A Geranyl diphosphate 2-C 99.1 2E-10 7E-15 107.5 10.4 107 156-290 118-224 (312)
84 3dtn_A Putative methyltransfer 99.1 2E-10 6.8E-15 102.2 9.8 105 155-290 44-151 (234)
85 3gnl_A Uncharacterized protein 99.1 2.3E-10 8E-15 105.3 10.5 131 147-312 12-143 (244)
86 2b25_A Hypothetical protein; s 99.1 3.3E-10 1.1E-14 107.4 11.8 146 151-322 101-255 (336)
87 3c0k_A UPF0064 protein YCCW; P 99.1 8.7E-10 3E-14 107.3 15.0 140 148-314 213-366 (396)
88 2fca_A TRNA (guanine-N(7)-)-me 99.1 6.3E-10 2.2E-14 99.0 12.8 125 155-312 38-173 (213)
89 3m6w_A RRNA methylase; rRNA me 99.1 4.3E-10 1.5E-14 112.3 13.0 141 145-314 91-255 (464)
90 2o57_A Putative sarcosine dime 99.1 2.3E-10 7.8E-15 105.7 10.2 109 154-290 81-190 (297)
91 3ofk_A Nodulation protein S; N 99.1 1.4E-10 4.7E-15 102.0 8.3 110 146-288 42-155 (216)
92 2pbf_A Protein-L-isoaspartate 99.1 2.2E-10 7.4E-15 101.8 9.7 112 145-286 69-192 (227)
93 1yzh_A TRNA (guanine-N(7)-)-me 99.1 6.8E-10 2.3E-14 98.1 12.8 126 155-313 41-177 (214)
94 3ajd_A Putative methyltransfer 99.1 5.3E-10 1.8E-14 103.4 12.6 140 146-313 74-236 (274)
95 2as0_A Hypothetical protein PH 99.1 7.4E-10 2.5E-14 107.7 14.1 142 148-316 209-364 (396)
96 3a27_A TYW2, uncharacterized p 99.1 3.1E-10 1.1E-14 105.1 10.9 128 154-313 118-246 (272)
97 2i7c_A Spermidine synthase; tr 99.1 3.6E-10 1.2E-14 105.4 11.4 112 154-289 77-194 (283)
98 2xvm_A Tellurite resistance pr 99.1 3.8E-10 1.3E-14 97.2 10.7 109 149-288 26-137 (199)
99 1kpg_A CFA synthase;, cyclopro 99.1 7.9E-10 2.7E-14 101.6 12.8 115 145-290 51-171 (287)
100 2kw5_A SLR1183 protein; struct 99.1 3E-10 1E-14 98.8 9.5 113 147-290 21-134 (202)
101 3g5t_A Trans-aconitate 3-methy 99.1 3.9E-10 1.3E-14 104.7 10.8 117 146-288 25-150 (299)
102 1pjz_A Thiopurine S-methyltran 99.1 7.7E-11 2.6E-15 104.1 5.7 117 155-289 22-144 (203)
103 4dzr_A Protein-(glutamine-N5) 99.1 2.4E-10 8.1E-15 99.4 8.7 108 154-289 29-166 (215)
104 3grz_A L11 mtase, ribosomal pr 99.1 3.3E-10 1.1E-14 99.1 9.6 131 145-313 49-180 (205)
105 1o54_A SAM-dependent O-methylt 99.1 4.5E-10 1.6E-14 103.4 11.0 125 151-311 108-232 (277)
106 2nxc_A L11 mtase, ribosomal pr 99.1 1.3E-09 4.5E-14 99.7 13.9 137 146-321 110-249 (254)
107 1wxx_A TT1595, hypothetical pr 99.1 9E-10 3.1E-14 106.7 13.5 146 139-314 193-352 (382)
108 3uwp_A Histone-lysine N-methyl 99.1 1E-09 3.5E-14 108.1 13.5 118 155-292 173-293 (438)
109 2p7i_A Hypothetical protein; p 99.1 2.7E-10 9.3E-15 101.1 8.5 110 145-289 32-143 (250)
110 4dcm_A Ribosomal RNA large sub 99.1 8.7E-10 3E-14 107.0 12.6 139 155-325 222-366 (375)
111 2ozv_A Hypothetical protein AT 99.1 2.2E-10 7.4E-15 105.3 7.9 121 138-285 20-168 (260)
112 2ex4_A Adrenal gland protein A 99.1 3.8E-10 1.3E-14 101.2 9.3 142 144-314 64-221 (241)
113 2yxe_A Protein-L-isoaspartate 99.1 5E-10 1.7E-14 98.5 9.8 105 152-288 74-178 (215)
114 3gu3_A Methyltransferase; alph 99.1 2.4E-10 8.1E-15 105.6 8.0 109 152-289 19-128 (284)
115 2pwy_A TRNA (adenine-N(1)-)-me 99.1 7.6E-10 2.6E-14 99.7 11.2 124 152-311 93-217 (258)
116 3ou2_A SAM-dependent methyltra 99.1 4.6E-10 1.6E-14 98.1 9.3 111 145-290 36-149 (218)
117 1g8a_A Fibrillarin-like PRE-rR 99.1 3.9E-10 1.3E-14 100.3 8.8 103 155-286 73-177 (227)
118 3mgg_A Methyltransferase; NYSG 99.1 6.4E-10 2.2E-14 101.5 10.4 107 155-289 37-144 (276)
119 1i9g_A Hypothetical protein RV 99.0 7.8E-10 2.7E-14 101.3 10.9 125 152-310 96-222 (280)
120 1i1n_A Protein-L-isoaspartate 99.0 6.3E-10 2.2E-14 98.7 9.8 113 145-288 66-183 (226)
121 1nt2_A Fibrillarin-like PRE-rR 99.0 5.4E-10 1.9E-14 99.6 9.3 102 155-286 57-160 (210)
122 2frx_A Hypothetical protein YE 99.0 1.4E-09 4.6E-14 109.1 13.3 136 146-309 106-266 (479)
123 3l8d_A Methyltransferase; stru 99.0 1.3E-09 4.4E-14 97.1 11.7 136 146-314 43-196 (242)
124 3ccf_A Cyclopropane-fatty-acyl 99.0 7.5E-10 2.6E-14 101.6 10.2 108 146-290 49-157 (279)
125 2b3t_A Protein methyltransfera 99.0 3.6E-09 1.2E-13 97.4 14.7 135 142-311 94-256 (276)
126 4fsd_A Arsenic methyltransfera 99.0 1.4E-09 4.7E-14 105.3 12.5 138 154-312 82-245 (383)
127 3gdh_A Trimethylguanosine synt 99.0 6.8E-11 2.3E-15 106.0 2.9 112 146-287 69-181 (241)
128 3e23_A Uncharacterized protein 99.0 6E-10 2E-14 97.7 8.9 131 146-313 33-177 (211)
129 3ocj_A Putative exported prote 99.0 1.4E-10 4.8E-15 108.3 4.9 109 155-290 118-230 (305)
130 2gb4_A Thiopurine S-methyltran 99.0 8.1E-10 2.8E-14 101.5 9.8 115 155-285 68-189 (252)
131 3m70_A Tellurite resistance pr 99.0 1.2E-09 4.1E-14 100.4 10.8 109 146-287 112-223 (286)
132 2yxl_A PH0851 protein, 450AA l 99.0 1.5E-09 5.3E-14 107.5 12.3 142 145-314 249-415 (450)
133 2fk8_A Methoxy mycolic acid sy 99.0 1.6E-09 5.5E-14 101.2 11.8 115 145-290 77-197 (318)
134 3pfg_A N-methyltransferase; N, 99.0 4.7E-10 1.6E-14 101.8 7.9 108 146-289 40-153 (263)
135 3bzb_A Uncharacterized protein 99.0 1.6E-09 5.6E-14 100.5 11.7 152 139-314 60-233 (281)
136 1wzn_A SAM-dependent methyltra 99.0 1E-09 3.5E-14 98.7 9.8 113 144-288 27-146 (252)
137 2cmg_A Spermidine synthase; tr 99.0 4.3E-10 1.5E-14 104.1 7.4 99 155-287 72-171 (262)
138 1r18_A Protein-L-isoaspartate( 99.0 5.2E-10 1.8E-14 99.7 7.6 116 145-288 73-195 (227)
139 2qy6_A UPF0209 protein YFCK; s 99.0 7.6E-10 2.6E-14 102.4 8.9 148 155-313 60-230 (257)
140 1ve3_A Hypothetical protein PH 99.0 1.1E-09 3.8E-14 96.4 9.5 113 146-289 28-144 (227)
141 1u2z_A Histone-lysine N-methyl 99.0 1.3E-09 4.3E-14 108.0 10.8 117 155-290 242-362 (433)
142 1vbf_A 231AA long hypothetical 99.0 1.2E-09 4E-14 97.1 9.4 99 154-289 69-167 (231)
143 2vdv_E TRNA (guanine-N(7)-)-me 99.0 1.9E-09 6.4E-14 97.6 11.0 109 155-286 49-172 (246)
144 3r0q_C Probable protein argini 99.0 1.1E-09 3.9E-14 105.9 10.0 107 153-289 61-171 (376)
145 2ipx_A RRNA 2'-O-methyltransfe 99.0 1.3E-09 4.4E-14 97.6 9.5 103 155-286 77-181 (233)
146 1jsx_A Glucose-inhibited divis 99.0 8.9E-10 3E-14 96.1 8.2 103 155-289 65-167 (207)
147 1nv8_A HEMK protein; class I a 99.0 3E-09 1E-13 99.3 12.1 115 142-286 107-248 (284)
148 3id6_C Fibrillarin-like rRNA/T 99.0 1.1E-09 3.8E-14 99.9 9.0 129 155-313 76-211 (232)
149 3g07_A 7SK snRNA methylphospha 99.0 4.9E-10 1.7E-14 104.4 6.7 130 154-290 45-223 (292)
150 3ujc_A Phosphoethanolamine N-m 99.0 1E-09 3.6E-14 98.7 8.7 137 146-313 43-201 (266)
151 3bkw_A MLL3908 protein, S-aden 99.0 9.6E-10 3.3E-14 97.8 8.3 110 146-287 34-144 (243)
152 3v97_A Ribosomal RNA large sub 99.0 3.8E-09 1.3E-13 110.4 14.1 121 143-290 527-660 (703)
153 3bkx_A SAM-dependent methyltra 99.0 4.2E-09 1.4E-13 95.8 12.6 111 155-290 43-162 (275)
154 1y8c_A S-adenosylmethionine-de 99.0 7.7E-10 2.6E-14 98.3 7.4 109 146-286 26-141 (246)
155 1dl5_A Protein-L-isoaspartate 99.0 1.5E-09 5E-14 102.4 9.7 102 154-287 74-175 (317)
156 3dli_A Methyltransferase; PSI- 99.0 9.4E-10 3.2E-14 98.6 7.9 122 155-313 41-179 (240)
157 3g5l_A Putative S-adenosylmeth 99.0 1.2E-09 4E-14 98.4 8.4 100 155-286 44-144 (253)
158 1yb2_A Hypothetical protein TA 99.0 1.6E-09 5.4E-14 99.9 9.4 124 152-312 107-231 (275)
159 2p8j_A S-adenosylmethionine-de 99.0 9E-10 3.1E-14 95.9 7.4 116 145-290 13-131 (209)
160 3k6r_A Putative transferase PH 99.0 1.5E-09 5.2E-14 101.6 9.3 133 150-314 119-253 (278)
161 2fyt_A Protein arginine N-meth 99.0 2.6E-09 8.8E-14 102.1 11.0 105 152-285 61-169 (340)
162 1jg1_A PIMT;, protein-L-isoasp 99.0 1.6E-09 5.4E-14 97.2 9.0 103 152-288 88-190 (235)
163 3sm3_A SAM-dependent methyltra 99.0 2.2E-09 7.4E-14 94.7 9.6 110 155-290 30-144 (235)
164 2qm3_A Predicted methyltransfe 99.0 4.2E-09 1.4E-13 101.7 12.3 131 155-314 172-305 (373)
165 3cgg_A SAM-dependent methyltra 99.0 2.5E-09 8.4E-14 91.3 9.5 132 144-315 37-172 (195)
166 1ej0_A FTSJ; methyltransferase 98.9 6.3E-09 2.2E-13 86.8 11.8 99 155-290 22-139 (180)
167 3ckk_A TRNA (guanine-N(7)-)-me 98.9 1.1E-09 3.8E-14 99.4 7.6 111 155-286 46-167 (235)
168 3q7e_A Protein arginine N-meth 98.9 2.2E-09 7.4E-14 102.9 10.0 108 153-289 64-175 (349)
169 3i9f_A Putative type 11 methyl 98.9 9.1E-10 3.1E-14 93.1 6.5 106 146-290 9-115 (170)
170 1sqg_A SUN protein, FMU protei 98.9 9.6E-09 3.3E-13 101.0 14.8 140 144-313 235-399 (429)
171 3m33_A Uncharacterized protein 98.9 2.8E-10 9.6E-15 101.6 3.3 114 155-313 48-162 (226)
172 1fbn_A MJ fibrillarin homologu 98.9 2.3E-09 7.8E-14 96.0 9.1 102 155-286 74-177 (230)
173 2yvl_A TRMI protein, hypotheti 98.9 2.5E-09 8.4E-14 95.7 9.2 106 151-289 87-192 (248)
174 1ri5_A MRNA capping enzyme; me 98.9 1.4E-09 4.8E-14 99.7 7.4 107 155-289 64-176 (298)
175 3dmg_A Probable ribosomal RNA 98.9 2.2E-09 7.5E-14 104.5 9.0 113 144-287 217-340 (381)
176 2yqz_A Hypothetical protein TT 98.9 1.9E-09 6.5E-14 97.0 7.9 101 155-286 39-140 (263)
177 3ege_A Putative methyltransfer 98.9 1.5E-09 5.1E-14 98.9 6.9 99 154-289 33-132 (261)
178 3mq2_A 16S rRNA methyltransfer 98.9 1.1E-08 3.7E-13 90.2 12.2 137 153-314 25-180 (218)
179 3dp7_A SAM-dependent methyltra 98.9 8.4E-09 2.9E-13 98.9 12.3 111 154-291 178-291 (363)
180 2y1w_A Histone-arginine methyl 98.9 6.7E-09 2.3E-13 99.4 11.4 104 153-286 48-154 (348)
181 3bxo_A N,N-dimethyltransferase 98.9 1.4E-09 4.7E-14 96.6 6.1 100 155-290 40-144 (239)
182 2qfm_A Spermine synthase; sper 98.9 3.9E-09 1.3E-13 102.2 9.7 123 155-303 188-328 (364)
183 1g6q_1 HnRNP arginine N-methyl 98.9 5.6E-09 1.9E-13 99.1 10.6 106 152-286 35-144 (328)
184 3g2m_A PCZA361.24; SAM-depende 98.9 1.5E-09 5.2E-14 100.6 6.4 106 155-290 82-193 (299)
185 1xtp_A LMAJ004091AAA; SGPP, st 98.9 2.4E-09 8.3E-14 96.0 7.5 128 155-313 93-233 (254)
186 2p35_A Trans-aconitate 2-methy 98.9 2.5E-09 8.7E-14 96.1 7.4 100 155-288 33-133 (259)
187 3p2e_A 16S rRNA methylase; met 98.9 2.4E-09 8.2E-14 96.5 7.0 103 155-285 24-137 (225)
188 3mcz_A O-methyltransferase; ad 98.9 7.5E-09 2.6E-13 98.1 10.7 108 156-290 180-290 (352)
189 4hc4_A Protein arginine N-meth 98.9 6E-09 2E-13 101.5 10.2 106 153-288 81-190 (376)
190 2aot_A HMT, histamine N-methyl 98.9 3.7E-09 1.3E-13 98.0 8.2 111 156-287 53-172 (292)
191 3gwz_A MMCR; methyltransferase 98.9 1.9E-08 6.5E-13 96.7 13.2 106 155-290 202-310 (369)
192 1o9g_A RRNA methyltransferase; 98.9 2.3E-09 7.8E-14 97.0 6.3 144 145-290 38-217 (250)
193 3iv6_A Putative Zn-dependent a 98.9 5E-09 1.7E-13 97.2 8.5 103 152-286 42-147 (261)
194 3ggd_A SAM-dependent methyltra 98.9 3.7E-09 1.3E-13 94.7 7.3 113 146-290 46-166 (245)
195 3hp7_A Hemolysin, putative; st 98.8 2.3E-08 7.9E-13 94.2 12.9 127 155-313 85-227 (291)
196 3fzg_A 16S rRNA methylase; met 98.8 5E-09 1.7E-13 93.3 7.7 140 144-313 37-183 (200)
197 3q87_B N6 adenine specific DNA 98.8 9.8E-09 3.4E-13 88.0 9.3 123 144-314 11-145 (170)
198 3d2l_A SAM-dependent methyltra 98.8 8.4E-09 2.9E-13 91.6 9.0 108 146-286 23-136 (243)
199 2pxx_A Uncharacterized protein 98.8 3.3E-09 1.1E-13 92.3 5.8 115 145-290 31-162 (215)
200 2avn_A Ubiquinone/menaquinone 98.8 3.2E-09 1.1E-13 96.5 5.7 99 155-289 54-154 (260)
201 2pjd_A Ribosomal RNA small sub 98.8 1.1E-08 3.8E-13 97.4 9.5 133 155-324 196-334 (343)
202 2zfu_A Nucleomethylin, cerebra 98.8 1E-08 3.5E-13 90.0 8.5 119 145-314 57-175 (215)
203 3bgv_A MRNA CAP guanine-N7 met 98.8 9.5E-09 3.2E-13 96.0 8.8 114 155-289 34-157 (313)
204 2ip2_A Probable phenazine-spec 98.8 1.6E-08 5.6E-13 95.1 10.3 104 157-290 169-275 (334)
205 2gs9_A Hypothetical protein TT 98.8 5.9E-09 2E-13 91.1 6.5 99 155-290 36-135 (211)
206 3i53_A O-methyltransferase; CO 98.8 1E-08 3.5E-13 96.7 8.4 105 156-290 170-277 (332)
207 2r3s_A Uncharacterized protein 98.8 1.7E-08 5.7E-13 94.7 9.9 108 154-290 164-274 (335)
208 3tma_A Methyltransferase; thum 98.8 2.6E-08 8.7E-13 95.2 10.9 123 154-312 202-333 (354)
209 2yx1_A Hypothetical protein MJ 98.8 1.9E-08 6.6E-13 95.9 9.7 101 155-291 195-295 (336)
210 2qe6_A Uncharacterized protein 98.8 6.7E-08 2.3E-12 89.5 13.0 107 155-290 77-199 (274)
211 1x19_A CRTF-related protein; m 98.8 5.1E-08 1.7E-12 93.0 12.5 106 155-290 190-298 (359)
212 2dul_A N(2),N(2)-dimethylguano 98.8 2.4E-08 8.2E-13 97.1 10.3 104 153-286 45-163 (378)
213 1qzz_A RDMB, aclacinomycin-10- 98.7 1.8E-08 6.3E-13 96.1 8.9 104 155-288 182-288 (374)
214 2i62_A Nicotinamide N-methyltr 98.7 3.1E-09 1.1E-13 95.7 3.3 152 155-313 56-234 (265)
215 1tw3_A COMT, carminomycin 4-O- 98.7 4.2E-08 1.4E-12 93.2 11.1 105 155-289 183-290 (360)
216 2nyu_A Putative ribosomal RNA 98.7 8.3E-08 2.8E-12 82.6 11.6 99 155-290 22-148 (196)
217 3cc8_A Putative methyltransfer 98.7 1.3E-08 4.5E-13 89.1 6.5 98 155-288 32-131 (230)
218 2h00_A Methyltransferase 10 do 98.7 8.4E-09 2.9E-13 93.3 5.4 88 145-258 50-147 (254)
219 2b9e_A NOL1/NOP2/SUN domain fa 98.7 6.5E-08 2.2E-12 91.6 11.5 134 146-308 93-253 (309)
220 1vlm_A SAM-dependent methyltra 98.7 2.4E-08 8.1E-13 88.3 8.0 128 147-315 39-185 (219)
221 3b3j_A Histone-arginine methyl 98.7 2.6E-08 8.9E-13 99.7 8.8 101 155-285 158-261 (480)
222 3opn_A Putative hemolysin; str 98.7 2.5E-08 8.7E-13 90.4 7.4 128 155-314 37-180 (232)
223 3bt7_A TRNA (uracil-5-)-methyl 98.7 1E-07 3.4E-12 91.9 12.0 125 144-306 200-341 (369)
224 1p91_A Ribosomal RNA large sub 98.7 4.2E-08 1.4E-12 89.1 8.8 97 155-290 85-181 (269)
225 4e2x_A TCAB9; kijanose, tetron 98.7 1.5E-08 5.2E-13 98.4 6.2 136 146-313 95-248 (416)
226 2vdw_A Vaccinia virus capping 98.7 4.3E-08 1.5E-12 92.2 9.1 110 156-289 49-171 (302)
227 2plw_A Ribosomal RNA methyltra 98.7 1.1E-07 3.9E-12 82.2 11.0 36 156-194 23-59 (201)
228 1wy7_A Hypothetical protein PH 98.7 6.2E-07 2.1E-11 78.0 15.5 120 155-314 49-171 (207)
229 3axs_A Probable N(2),N(2)-dime 98.6 4.9E-08 1.7E-12 95.5 7.8 105 155-286 52-157 (392)
230 2jjq_A Uncharacterized RNA met 98.6 1.3E-07 4.6E-12 93.2 10.9 106 146-286 281-386 (425)
231 2g72_A Phenylethanolamine N-me 98.6 2.4E-08 8.3E-13 92.0 4.9 151 155-313 71-251 (289)
232 3lst_A CALO1 methyltransferase 98.6 7.4E-08 2.5E-12 91.6 8.0 103 155-290 184-289 (348)
233 3htx_A HEN1; HEN1, small RNA m 98.6 1.6E-07 5.4E-12 99.3 10.5 116 151-288 717-835 (950)
234 3dou_A Ribosomal RNA large sub 98.6 2.5E-07 8.5E-12 81.1 10.3 96 155-290 25-142 (191)
235 2wa2_A Non-structural protein 98.6 9E-08 3.1E-12 89.2 7.5 119 156-308 83-212 (276)
236 3giw_A Protein of unknown func 98.6 5.6E-07 1.9E-11 84.1 12.6 137 147-310 70-222 (277)
237 2a14_A Indolethylamine N-methy 98.6 3E-08 1E-12 90.7 3.8 151 155-313 55-233 (263)
238 1ne2_A Hypothetical protein TA 98.5 9E-07 3.1E-11 76.8 12.6 113 155-314 51-166 (200)
239 2oxt_A Nucleoside-2'-O-methylt 98.5 1.1E-07 3.8E-12 88.0 7.0 120 156-309 75-205 (265)
240 3tm4_A TRNA (guanine N2-)-meth 98.5 6.7E-07 2.3E-11 86.3 12.6 124 153-313 215-347 (373)
241 2oyr_A UPF0341 protein YHIQ; a 98.5 6.2E-08 2.1E-12 89.7 4.3 115 146-281 77-194 (258)
242 1fp1_D Isoliquiritigenin 2'-O- 98.5 2.3E-07 8E-12 89.0 8.0 98 155-290 209-309 (372)
243 3o4f_A Spermidine synthase; am 98.5 1.1E-06 3.7E-11 82.8 12.2 131 153-306 81-217 (294)
244 1af7_A Chemotaxis receptor met 98.5 7.7E-07 2.6E-11 82.9 10.7 131 155-286 105-251 (274)
245 2r6z_A UPF0341 protein in RSP 98.4 8.8E-08 3E-12 88.4 3.9 89 145-261 73-171 (258)
246 1fp2_A Isoflavone O-methyltran 98.4 2.4E-07 8.1E-12 88.1 6.7 98 155-290 188-291 (352)
247 3reo_A (ISO)eugenol O-methyltr 98.4 6E-07 2E-11 86.3 9.4 97 156-290 204-303 (368)
248 2p41_A Type II methyltransfera 98.4 6.3E-07 2.1E-11 84.6 8.9 115 156-307 83-209 (305)
249 1uwv_A 23S rRNA (uracil-5-)-me 98.4 9.2E-07 3.1E-11 87.1 9.9 131 145-313 273-409 (433)
250 2xyq_A Putative 2'-O-methyl tr 98.3 3.4E-06 1.2E-10 79.2 11.8 92 156-290 64-174 (290)
251 3p9c_A Caffeic acid O-methyltr 98.3 8.2E-07 2.8E-11 85.3 7.7 98 155-290 201-301 (364)
252 2f8l_A Hypothetical protein LM 98.3 9.9E-07 3.4E-11 83.8 8.1 107 155-287 130-256 (344)
253 1zq9_A Probable dimethyladenos 98.3 1.2E-06 4E-11 81.6 8.4 75 155-260 28-102 (285)
254 3gru_A Dimethyladenosine trans 98.2 4.6E-06 1.6E-10 78.5 10.3 96 145-275 37-136 (295)
255 3lcv_B Sisomicin-gentamicin re 98.2 1.8E-06 6.3E-11 80.2 7.4 139 145-314 121-268 (281)
256 2ih2_A Modification methylase 98.2 3.1E-06 1.1E-10 81.7 9.3 95 155-286 39-163 (421)
257 1zg3_A Isoflavanone 4'-O-methy 98.2 1.3E-06 4.5E-11 83.1 6.4 98 155-290 193-296 (358)
258 4gqb_A Protein arginine N-meth 98.2 2.5E-06 8.6E-11 88.1 8.9 105 156-285 358-465 (637)
259 3ll7_A Putative methyltransfer 98.2 9.5E-07 3.3E-11 86.8 4.9 74 156-258 94-170 (410)
260 4a6d_A Hydroxyindole O-methylt 98.2 3.6E-06 1.2E-10 80.4 8.9 105 155-290 179-286 (353)
261 2h1r_A Dimethyladenosine trans 98.1 2.7E-06 9.1E-11 79.7 6.0 74 155-260 42-115 (299)
262 1m6y_A S-adenosyl-methyltransf 98.1 6.4E-06 2.2E-10 77.7 8.2 79 155-261 26-108 (301)
263 4azs_A Methyltransferase WBDD; 98.1 4.9E-06 1.7E-10 84.6 7.2 101 155-284 66-170 (569)
264 4fzv_A Putative methyltransfer 98.0 4.5E-05 1.5E-09 73.7 13.3 146 146-314 139-313 (359)
265 1yub_A Ermam, rRNA methyltrans 98.0 1.6E-07 5.5E-12 85.1 -3.9 41 155-201 29-69 (245)
266 2okc_A Type I restriction enzy 98.0 6E-06 2E-10 81.4 7.0 117 146-285 159-305 (445)
267 1qam_A ERMC' methyltransferase 98.0 2E-05 6.7E-10 71.5 9.8 51 145-201 17-70 (244)
268 3frh_A 16S rRNA methylase; met 98.0 7.6E-06 2.6E-10 75.2 6.1 124 145-301 95-221 (253)
269 3tqs_A Ribosomal RNA small sub 98.0 7.5E-06 2.5E-10 75.3 6.2 87 155-275 29-118 (255)
270 3c6k_A Spermine synthase; sper 97.9 1.8E-05 6.2E-10 76.9 8.3 111 155-286 205-330 (381)
271 3vyw_A MNMC2; tRNA wobble urid 97.9 0.00012 4.2E-09 69.2 13.3 141 156-314 97-244 (308)
272 3ldu_A Putative methylase; str 97.9 1.6E-05 5.6E-10 77.2 7.5 82 155-260 195-310 (385)
273 3k0b_A Predicted N6-adenine-sp 97.8 3E-05 1E-09 75.6 8.1 82 155-260 201-316 (393)
274 3fut_A Dimethyladenosine trans 97.8 3.7E-05 1.3E-09 71.4 7.3 95 146-275 35-132 (271)
275 3ldg_A Putative uncharacterize 97.8 6.9E-05 2.4E-09 72.9 9.5 81 155-259 194-308 (384)
276 2ar0_A M.ecoki, type I restric 97.7 4.8E-05 1.6E-09 77.1 7.4 111 156-285 170-310 (541)
277 3ua3_A Protein arginine N-meth 97.7 4.9E-05 1.7E-09 79.1 7.1 110 156-288 410-535 (745)
278 2ld4_A Anamorsin; methyltransf 97.6 3E-05 1E-09 65.6 3.7 110 155-313 12-130 (176)
279 3v97_A Ribosomal RNA large sub 97.5 0.00026 9E-09 73.9 9.5 109 155-285 190-345 (703)
280 3ftd_A Dimethyladenosine trans 97.4 0.00022 7.4E-09 65.1 7.0 96 146-276 19-118 (249)
281 3pvc_A TRNA 5-methylaminomethy 97.4 0.00084 2.9E-08 69.4 11.8 149 155-314 58-229 (689)
282 1qyr_A KSGA, high level kasuga 97.4 9.7E-05 3.3E-09 67.7 3.9 42 155-202 21-62 (252)
283 3khk_A Type I restriction-modi 97.4 0.00018 6.1E-09 73.0 5.9 118 146-285 233-393 (544)
284 3uzu_A Ribosomal RNA small sub 97.3 0.0002 6.9E-09 66.6 5.4 44 155-201 42-86 (279)
285 3lkd_A Type I restriction-modi 97.1 0.0014 4.7E-08 66.5 9.6 109 155-285 221-356 (542)
286 3iht_A S-adenosyl-L-methionine 97.0 0.0054 1.9E-07 52.5 10.6 115 142-290 25-150 (174)
287 4auk_A Ribosomal RNA large sub 96.9 0.0085 2.9E-07 58.0 12.8 119 156-311 212-333 (375)
288 2k4m_A TR8_protein, UPF0146 pr 96.9 0.0019 6.6E-08 54.8 6.9 49 144-197 23-73 (153)
289 3s1s_A Restriction endonucleas 96.8 0.011 3.6E-07 62.7 13.5 43 156-199 322-364 (878)
290 3evf_A RNA-directed RNA polyme 96.7 0.0067 2.3E-07 56.4 9.4 122 156-309 75-204 (277)
291 3ps9_A TRNA 5-methylaminomethy 96.5 0.015 5.2E-07 59.7 11.7 146 157-313 68-236 (676)
292 1wg8_A Predicted S-adenosylmet 96.4 0.0058 2E-07 57.0 7.2 50 145-201 13-62 (285)
293 3lkz_A Non-structural protein 95.6 0.053 1.8E-06 50.9 9.7 118 156-309 95-224 (321)
294 2oo3_A Protein involved in cat 95.5 0.012 3.9E-07 55.0 4.8 122 152-306 88-215 (283)
295 2zig_A TTHA0409, putative modi 95.3 0.013 4.4E-07 54.3 4.4 51 145-201 223-275 (297)
296 2px2_A Genome polyprotein [con 95.2 0.047 1.6E-06 50.3 7.7 120 156-309 74-203 (269)
297 3p8z_A Mtase, non-structural p 95.2 0.17 5.8E-06 46.3 11.1 120 156-309 79-206 (267)
298 3tka_A Ribosomal RNA small sub 95.1 0.023 7.9E-07 54.3 5.6 43 155-200 57-99 (347)
299 3gcz_A Polyprotein; flavivirus 94.9 0.1 3.4E-06 48.6 9.0 122 156-309 91-221 (282)
300 3eld_A Methyltransferase; flav 93.9 0.39 1.3E-05 45.0 10.7 122 156-309 82-211 (300)
301 3r24_A NSP16, 2'-O-methyl tran 93.6 0.28 9.6E-06 46.2 9.1 90 156-288 110-218 (344)
302 2efj_A 3,7-dimethylxanthine me 93.5 0.42 1.4E-05 46.3 10.6 21 156-176 53-73 (384)
303 2dph_A Formaldehyde dismutase; 93.2 0.18 6.2E-06 48.1 7.6 102 155-287 185-299 (398)
304 1pqw_A Polyketide synthase; ro 93.2 0.17 5.8E-06 43.1 6.6 96 155-287 38-137 (198)
305 3s2e_A Zinc-containing alcohol 93.0 0.13 4.5E-06 47.8 6.1 98 155-288 166-264 (340)
306 3ufb_A Type I restriction-modi 92.8 0.92 3.2E-05 45.5 12.3 57 145-201 207-272 (530)
307 2py6_A Methyltransferase FKBM; 92.6 0.28 9.5E-06 47.5 8.0 46 155-202 226-271 (409)
308 1f8f_A Benzyl alcohol dehydrog 92.5 0.22 7.7E-06 46.9 6.9 98 155-287 190-289 (371)
309 3b5i_A S-adenosyl-L-methionine 91.6 0.49 1.7E-05 45.6 8.2 39 156-194 53-102 (374)
310 3gms_A Putative NADPH:quinone 91.5 0.43 1.5E-05 44.4 7.6 97 155-288 144-244 (340)
311 1uuf_A YAHK, zinc-type alcohol 91.5 1 3.5E-05 42.5 10.3 93 155-286 194-287 (369)
312 1g60_A Adenine-specific methyl 91.0 0.21 7.2E-06 45.1 4.7 51 145-201 200-252 (260)
313 1g60_A Adenine-specific methyl 91.0 0.23 7.8E-06 44.9 4.9 53 234-286 5-73 (260)
314 1pl8_A Human sorbitol dehydrog 90.9 0.78 2.7E-05 42.9 8.8 97 155-287 171-273 (356)
315 3fpc_A NADP-dependent alcohol 90.3 0.33 1.1E-05 45.4 5.5 98 155-287 166-266 (352)
316 1boo_A Protein (N-4 cytosine-s 90.3 0.37 1.3E-05 45.1 5.8 79 234-313 15-115 (323)
317 1i4w_A Mitochondrial replicati 90.1 0.29 9.9E-06 46.8 5.0 39 157-199 60-98 (353)
318 1eg2_A Modification methylase 90.0 0.34 1.2E-05 45.5 5.3 53 234-286 39-105 (319)
319 1m6e_X S-adenosyl-L-methionnin 89.8 0.24 8.3E-06 47.5 4.2 39 156-194 52-102 (359)
320 1e3j_A NADP(H)-dependent ketos 89.4 1.4 4.9E-05 41.0 9.2 97 155-287 168-271 (352)
321 4eez_A Alcohol dehydrogenase 1 89.4 1.5 5E-05 40.6 9.2 99 155-288 163-264 (348)
322 4b7c_A Probable oxidoreductase 89.4 0.61 2.1E-05 43.1 6.6 96 154-286 148-247 (336)
323 1piw_A Hypothetical zinc-type 89.4 1.6 5.6E-05 40.7 9.6 95 155-286 179-275 (360)
324 4ej6_A Putative zinc-binding d 89.2 0.69 2.4E-05 43.7 6.9 100 154-288 181-285 (370)
325 3two_A Mannitol dehydrogenase; 89.1 2.1 7.1E-05 39.8 10.1 89 155-287 176-265 (348)
326 3jv7_A ADH-A; dehydrogenase, n 88.6 1 3.4E-05 41.8 7.5 97 155-287 171-270 (345)
327 3uko_A Alcohol dehydrogenase c 88.4 1.3 4.3E-05 41.8 8.1 99 155-288 193-296 (378)
328 3jyn_A Quinone oxidoreductase; 88.2 0.61 2.1E-05 43.0 5.7 97 155-288 140-240 (325)
329 1p0f_A NADP-dependent alcohol 88.2 2.1 7.1E-05 40.2 9.5 98 155-287 191-293 (373)
330 1v3u_A Leukotriene B4 12- hydr 88.1 0.84 2.9E-05 42.1 6.5 95 155-286 145-243 (333)
331 1cdo_A Alcohol dehydrogenase; 88.1 2.1 7.2E-05 40.1 9.4 97 155-287 192-294 (374)
332 1e3i_A Alcohol dehydrogenase, 87.9 2.1 7.1E-05 40.2 9.3 97 155-286 195-296 (376)
333 1kol_A Formaldehyde dehydrogen 87.9 1.6 5.3E-05 41.4 8.4 102 155-287 185-300 (398)
334 3uog_A Alcohol dehydrogenase; 87.8 0.55 1.9E-05 44.2 5.1 97 155-288 189-288 (363)
335 4a2c_A Galactitol-1-phosphate 87.7 1.9 6.5E-05 39.8 8.7 101 154-289 159-262 (346)
336 1iz0_A Quinone oxidoreductase; 87.6 1.9 6.6E-05 39.1 8.6 90 155-286 125-217 (302)
337 3qwb_A Probable quinone oxidor 87.5 0.5 1.7E-05 43.7 4.6 95 155-286 148-246 (334)
338 2fzw_A Alcohol dehydrogenase c 87.2 2.5 8.7E-05 39.5 9.4 98 155-287 190-292 (373)
339 2jhf_A Alcohol dehydrogenase E 87.0 2.4 8.1E-05 39.8 9.1 97 155-287 191-293 (374)
340 4eye_A Probable oxidoreductase 86.9 1.2 4.2E-05 41.3 6.9 94 155-286 159-256 (342)
341 2h6e_A ADH-4, D-arabinose 1-de 86.7 0.87 3E-05 42.3 5.8 98 155-287 170-269 (344)
342 3m6i_A L-arabinitol 4-dehydrog 86.5 2.6 8.7E-05 39.3 8.9 97 155-288 179-284 (363)
343 2c0c_A Zinc binding alcohol de 86.4 1.5 5.2E-05 41.1 7.4 97 154-287 162-261 (362)
344 3ip1_A Alcohol dehydrogenase, 85.7 1.4 4.8E-05 42.0 6.8 42 156-201 214-256 (404)
345 2vz8_A Fatty acid synthase; tr 85.2 0.59 2E-05 55.3 4.5 107 156-288 1241-1349(2512)
346 1wly_A CAAR, 2-haloacrylate re 85.0 1.2 4E-05 41.1 5.7 95 155-286 145-243 (333)
347 1rjw_A ADH-HT, alcohol dehydro 84.9 1.6 5.6E-05 40.4 6.7 97 155-287 164-261 (339)
348 1qor_A Quinone oxidoreductase; 84.7 1.2 4E-05 41.0 5.5 96 155-287 140-239 (327)
349 2cf5_A Atccad5, CAD, cinnamyl 84.0 5 0.00017 37.4 9.7 96 155-287 180-275 (357)
350 4f3n_A Uncharacterized ACR, CO 83.7 2.4 8.2E-05 41.6 7.5 48 154-201 136-184 (432)
351 3goh_A Alcohol dehydrogenase, 83.5 2.2 7.5E-05 38.9 6.8 86 155-286 142-228 (315)
352 2hcy_A Alcohol dehydrogenase 1 83.4 4 0.00014 37.8 8.7 97 155-287 169-269 (347)
353 4dcm_A Ribosomal RNA large sub 83.3 2.5 8.6E-05 40.2 7.4 137 136-310 18-155 (375)
354 1jvb_A NAD(H)-dependent alcoho 82.6 2 6.9E-05 39.8 6.3 97 155-286 170-270 (347)
355 2j3h_A NADP-dependent oxidored 82.4 1.4 4.6E-05 40.8 5.0 96 155-286 155-254 (345)
356 2b5w_A Glucose dehydrogenase; 82.4 5 0.00017 37.3 8.9 95 157-288 174-274 (357)
357 1vj0_A Alcohol dehydrogenase, 82.2 1.9 6.4E-05 40.8 6.0 95 156-286 196-297 (380)
358 2zig_A TTHA0409, putative modi 82.1 1.8 6E-05 39.7 5.6 80 234-313 22-131 (297)
359 4dup_A Quinone oxidoreductase; 81.9 1.4 4.8E-05 41.2 4.9 96 155-287 167-265 (353)
360 1yb5_A Quinone oxidoreductase; 81.6 1.4 4.7E-05 41.3 4.7 95 155-286 170-268 (351)
361 2dq4_A L-threonine 3-dehydroge 81.6 1.9 6.7E-05 39.9 5.7 95 155-286 164-261 (343)
362 2eih_A Alcohol dehydrogenase; 81.4 2.1 7.1E-05 39.7 5.9 95 155-286 166-264 (343)
363 1g55_A DNA cytosine methyltran 81.4 4.4 0.00015 38.0 8.2 42 156-201 2-44 (343)
364 1xa0_A Putative NADPH dependen 80.7 3 0.0001 38.2 6.6 92 158-287 152-246 (328)
365 4dvj_A Putative zinc-dependent 80.5 2.8 9.5E-05 39.3 6.5 95 156-286 172-269 (363)
366 1yqd_A Sinapyl alcohol dehydro 79.5 7.8 0.00027 36.2 9.2 96 155-287 187-282 (366)
367 2j8z_A Quinone oxidoreductase; 78.8 1.8 6.1E-05 40.4 4.5 96 155-287 162-261 (354)
368 2zb4_A Prostaglandin reductase 78.7 2.8 9.5E-05 39.0 5.8 94 157-286 162-259 (357)
369 2d8a_A PH0655, probable L-thre 77.8 3.2 0.00011 38.4 5.9 96 155-286 167-266 (348)
370 4a7p_A UDP-glucose dehydrogena 77.4 55 0.0019 31.8 15.4 131 155-308 7-146 (446)
371 3nx4_A Putative oxidoreductase 77.3 5.2 0.00018 36.4 7.1 91 157-287 148-241 (324)
372 3ggo_A Prephenate dehydrogenas 76.7 7.6 0.00026 35.8 8.1 39 156-196 33-71 (314)
373 2vn8_A Reticulon-4-interacting 76.4 6.5 0.00022 36.8 7.7 95 155-286 183-279 (375)
374 1tt7_A YHFP; alcohol dehydroge 75.6 5 0.00017 36.7 6.5 91 158-286 153-246 (330)
375 3fwz_A Inner membrane protein 75.0 4.6 0.00016 32.3 5.4 93 157-285 8-103 (140)
376 3trk_A Nonstructural polyprote 74.9 4.6 0.00016 37.4 5.8 57 250-308 210-278 (324)
377 2cdc_A Glucose dehydrogenase g 72.8 8.9 0.00031 35.7 7.6 95 156-288 181-279 (366)
378 3gqv_A Enoyl reductase; medium 72.8 12 0.00041 35.0 8.5 95 155-286 164-262 (371)
379 3fbg_A Putative arginate lyase 72.6 6.6 0.00023 36.3 6.6 94 155-285 150-246 (346)
380 2o3j_A UDP-glucose 6-dehydroge 72.6 24 0.00083 34.5 11.0 129 157-307 10-151 (481)
381 4ezb_A Uncharacterized conserv 71.5 46 0.0016 30.4 12.1 116 157-312 25-142 (317)
382 3gaz_A Alcohol dehydrogenase s 71.4 4.8 0.00016 37.3 5.3 92 155-286 150-245 (343)
383 2vhw_A Alanine dehydrogenase; 70.8 8.4 0.00029 36.5 7.0 37 154-194 166-202 (377)
384 3g7u_A Cytosine-specific methy 70.5 15 0.00052 34.9 8.7 37 157-198 3-39 (376)
385 3pi7_A NADH oxidoreductase; gr 70.1 7.6 0.00026 35.8 6.4 32 250-287 232-263 (349)
386 4a0s_A Octenoyl-COA reductase/ 69.7 7.1 0.00024 37.5 6.3 33 249-287 304-336 (447)
387 3pid_A UDP-glucose 6-dehydroge 69.6 18 0.0006 35.3 9.1 128 152-306 32-168 (432)
388 4e21_A 6-phosphogluconate dehy 68.0 33 0.0011 32.3 10.4 117 155-313 21-137 (358)
389 3la6_A Tyrosine-protein kinase 68.0 17 0.00059 32.9 8.3 57 249-311 199-255 (286)
390 4dzz_A Plasmid partitioning pr 67.6 48 0.0016 27.2 10.5 54 245-305 69-122 (206)
391 3gg2_A Sugar dehydrogenase, UD 67.6 68 0.0023 31.0 12.9 127 157-306 3-137 (450)
392 2y0c_A BCEC, UDP-glucose dehyd 67.5 56 0.0019 31.9 12.3 129 155-306 7-143 (478)
393 1gu7_A Enoyl-[acyl-carrier-pro 65.8 26 0.0009 32.2 9.2 33 249-287 243-275 (364)
394 4a27_A Synaptic vesicle membra 65.8 13 0.00044 34.3 7.0 33 249-287 206-238 (349)
395 2c7p_A Modification methylase 65.7 31 0.0011 32.0 9.6 37 156-197 11-47 (327)
396 1boo_A Protein (N-4 cytosine-s 65.6 6.1 0.00021 36.6 4.7 53 145-203 240-294 (323)
397 1l7d_A Nicotinamide nucleotide 64.8 19 0.00064 34.1 8.1 44 154-201 170-213 (384)
398 3krt_A Crotonyl COA reductase; 64.5 6.1 0.00021 38.2 4.6 31 250-286 313-343 (456)
399 1zkd_A DUF185; NESG, RPR58, st 64.2 6.6 0.00023 37.9 4.7 43 157-199 82-127 (387)
400 2eez_A Alanine dehydrogenase; 63.2 6.5 0.00022 37.1 4.5 37 154-194 164-200 (369)
401 2hwk_A Helicase NSP2; rossman 63.0 8.8 0.0003 35.8 5.1 56 250-307 205-272 (320)
402 1pjc_A Protein (L-alanine dehy 63.0 20 0.00069 33.5 7.9 37 154-194 165-201 (361)
403 3qha_A Putative oxidoreductase 62.5 54 0.0018 29.4 10.5 111 157-312 16-126 (296)
404 3tqh_A Quinone oxidoreductase; 62.4 18 0.0006 32.9 7.2 31 250-286 214-244 (321)
405 3cio_A ETK, tyrosine-protein k 62.2 36 0.0012 30.9 9.3 58 248-311 210-267 (299)
406 3p2y_A Alanine dehydrogenase/p 61.8 11 0.00037 36.3 5.8 43 155-201 183-225 (381)
407 2g1u_A Hypothetical protein TM 61.4 57 0.002 25.9 9.5 39 154-196 17-55 (155)
408 2g5c_A Prephenate dehydrogenas 61.0 22 0.00076 31.4 7.5 36 158-195 3-38 (281)
409 3dmg_A Probable ribosomal RNA 60.7 9.9 0.00034 36.2 5.3 126 138-309 28-157 (381)
410 1eg2_A Modification methylase 59.0 11 0.00037 35.0 5.1 52 144-201 229-285 (319)
411 4e5n_A Thermostable phosphite 58.5 27 0.00092 32.5 7.8 39 154-196 143-181 (330)
412 4gua_A Non-structural polyprot 58.4 17 0.00058 37.0 6.5 57 250-308 220-288 (670)
413 3vtf_A UDP-glucose 6-dehydroge 57.7 26 0.00088 34.3 7.7 38 156-197 21-58 (444)
414 2uyo_A Hypothetical protein ML 57.5 24 0.00082 32.6 7.2 111 155-290 102-221 (310)
415 3d4o_A Dipicolinate synthase s 57.4 43 0.0015 30.1 8.9 37 153-193 152-188 (293)
416 3mag_A VP39; methylated adenin 55.8 27 0.00093 32.5 7.1 49 146-194 49-99 (307)
417 1x13_A NAD(P) transhydrogenase 55.8 12 0.00041 35.8 5.0 42 154-199 170-211 (401)
418 3c85_A Putative glutathione-re 55.4 24 0.00083 28.9 6.3 36 156-194 39-74 (183)
419 3b1f_A Putative prephenate deh 55.2 31 0.0011 30.6 7.4 37 156-194 6-42 (290)
420 4dio_A NAD(P) transhydrogenase 55.2 24 0.00083 34.1 7.0 43 155-201 189-231 (405)
421 3g79_A NDP-N-acetyl-D-galactos 53.1 1.7E+02 0.0059 28.6 13.6 120 153-289 15-149 (478)
422 2q3e_A UDP-glucose 6-dehydroge 53.1 98 0.0033 29.8 11.1 39 157-197 6-44 (467)
423 3bfv_A CAPA1, CAPB2, membrane 52.9 38 0.0013 30.2 7.6 59 248-312 188-246 (271)
424 3ce6_A Adenosylhomocysteinase; 51.6 26 0.00089 34.7 6.7 38 154-195 272-309 (494)
425 1rjd_A PPM1P, carboxy methyl t 51.5 51 0.0018 30.6 8.5 39 154-197 96-134 (334)
426 3ea0_A ATPase, para family; al 51.3 57 0.002 27.6 8.3 34 165-199 15-50 (245)
427 4eqs_A Coenzyme A disulfide re 49.0 15 0.00051 35.2 4.4 46 147-196 138-183 (437)
428 3l9w_A Glutathione-regulated p 48.6 19 0.00065 34.6 5.1 93 157-285 5-100 (413)
429 3jtm_A Formate dehydrogenase, 48.3 49 0.0017 31.1 7.8 42 153-198 161-202 (351)
430 1bg6_A N-(1-D-carboxylethyl)-L 48.2 31 0.0011 31.4 6.3 104 157-286 5-108 (359)
431 1zsy_A Mitochondrial 2-enoyl t 48.2 69 0.0024 29.3 8.8 35 155-194 167-204 (357)
432 1lss_A TRK system potassium up 48.1 59 0.002 24.7 7.2 34 157-194 5-38 (140)
433 1h2b_A Alcohol dehydrogenase; 48.0 39 0.0013 31.1 7.1 43 155-200 186-228 (359)
434 2rir_A Dipicolinate synthase, 47.7 77 0.0026 28.4 8.9 37 153-193 154-190 (300)
435 3pef_A 6-phosphogluconate dehy 47.7 1.5E+02 0.005 26.1 11.3 112 157-312 2-116 (287)
436 3cwq_A Para family chromosome 46.7 82 0.0028 26.5 8.5 30 163-195 11-40 (209)
437 2nac_A NAD-dependent formate d 43.7 66 0.0023 30.8 8.0 41 153-197 188-228 (393)
438 2g76_A 3-PGDH, D-3-phosphoglyc 43.4 56 0.0019 30.4 7.4 38 153-194 162-199 (335)
439 2dpo_A L-gulonate 3-dehydrogen 43.4 1E+02 0.0035 28.3 9.1 40 156-199 6-45 (319)
440 3doj_A AT3G25530, dehydrogenas 43.3 1.8E+02 0.0062 26.0 11.4 37 156-196 21-57 (310)
441 1wwk_A Phosphoglycerate dehydr 43.0 40 0.0014 30.8 6.2 38 153-194 139-176 (307)
442 3g0o_A 3-hydroxyisobutyrate de 42.2 83 0.0028 28.1 8.2 34 157-194 8-41 (303)
443 1dlj_A UDP-glucose dehydrogena 41.0 1.3E+02 0.0044 28.4 9.6 120 158-304 2-130 (402)
444 2h78_A Hibadh, 3-hydroxyisobut 40.9 1.3E+02 0.0043 26.7 9.2 112 157-312 4-118 (302)
445 2b4a_A BH3024; flavodoxin-like 40.8 1.1E+02 0.0038 22.8 7.9 36 250-286 59-95 (138)
446 1qkk_A DCTD, C4-dicarboxylate 40.4 1.1E+02 0.0036 23.5 7.7 50 240-289 35-85 (155)
447 2cvz_A Dehydrogenase, 3-hydrox 40.4 1.3E+02 0.0043 26.3 9.0 108 158-311 3-110 (289)
448 3pdu_A 3-hydroxyisobutyrate de 40.1 1.3E+02 0.0045 26.4 9.1 111 158-312 3-116 (287)
449 4dll_A 2-hydroxy-3-oxopropiona 40.1 1.3E+02 0.0046 27.1 9.3 113 156-312 31-145 (320)
450 3jte_A Response regulator rece 40.1 1.1E+02 0.0039 22.8 7.7 41 249-289 47-87 (143)
451 3gvp_A Adenosylhomocysteinase 39.9 32 0.0011 33.6 5.2 36 154-193 218-253 (435)
452 2gcg_A Glyoxylate reductase/hy 39.6 1E+02 0.0035 28.3 8.5 39 154-196 153-191 (330)
453 2ph1_A Nucleotide-binding prot 39.3 1.2E+02 0.0041 26.2 8.6 58 250-312 127-184 (262)
454 2zay_A Response regulator rece 39.3 1.1E+02 0.0038 23.0 7.6 40 250-289 51-92 (147)
455 2w2k_A D-mandelate dehydrogena 39.3 81 0.0028 29.3 7.8 41 153-197 160-201 (348)
456 1j8m_F SRP54, signal recogniti 39.2 88 0.003 28.4 7.8 41 250-290 179-224 (297)
457 3i42_A Response regulator rece 39.1 93 0.0032 22.8 6.9 41 250-290 46-88 (127)
458 3gvx_A Glycerate dehydrogenase 38.8 65 0.0022 29.4 6.9 38 153-194 119-156 (290)
459 3ojo_A CAP5O; rossmann fold, c 38.8 2.7E+02 0.0093 26.7 12.5 127 157-310 12-149 (431)
460 1mv8_A GMD, GDP-mannose 6-dehy 38.8 1.1E+02 0.0038 29.0 8.9 127 158-307 2-140 (436)
461 1ve1_A O-acetylserine sulfhydr 38.6 45 0.0015 30.1 5.7 37 156-193 167-203 (304)
462 3ksu_A 3-oxoacyl-acyl carrier 38.6 1.2E+02 0.0043 26.2 8.6 37 154-193 9-45 (262)
463 3evt_A Phosphoglycerate dehydr 38.4 63 0.0022 29.9 6.8 39 153-195 134-172 (324)
464 4hy3_A Phosphoglycerate oxidor 38.0 77 0.0026 30.0 7.4 36 154-193 174-209 (365)
465 1ks9_A KPA reductase;, 2-dehyd 37.5 1.3E+02 0.0044 26.0 8.5 94 158-285 2-95 (291)
466 2pd4_A Enoyl-[acyl-carrier-pro 36.6 1.9E+02 0.0066 25.0 9.6 38 155-194 5-43 (275)
467 3grc_A Sensor protein, kinase; 36.6 1.2E+02 0.0041 22.6 7.3 38 250-287 49-88 (140)
468 1jkx_A GART;, phosphoribosylgl 36.5 2.1E+02 0.0071 24.7 10.1 58 250-314 78-138 (212)
469 3k31_A Enoyl-(acyl-carrier-pro 36.2 1E+02 0.0035 27.4 7.7 39 154-194 28-67 (296)
470 2j6i_A Formate dehydrogenase; 36.1 88 0.003 29.3 7.5 41 153-197 161-202 (364)
471 2dbq_A Glyoxylate reductase; D 36.0 65 0.0022 29.7 6.5 38 154-195 148-185 (334)
472 2f1k_A Prephenate dehydrogenas 35.8 97 0.0033 27.0 7.4 33 158-194 2-34 (279)
473 3kto_A Response regulator rece 35.7 1.4E+02 0.0046 22.3 7.6 52 239-290 37-91 (136)
474 4fb5_A Probable oxidoreductase 35.5 2.5E+02 0.0085 25.3 10.7 44 152-197 21-71 (393)
475 3cg4_A Response regulator rece 35.5 1.4E+02 0.0047 22.3 8.2 39 250-288 50-90 (142)
476 3hv2_A Response regulator/HD d 34.9 1.1E+02 0.0036 23.5 6.8 40 250-289 57-96 (153)
477 4d9b_A D-cysteine desulfhydras 34.8 52 0.0018 30.4 5.6 37 158-194 201-237 (342)
478 2ywr_A Phosphoribosylglycinami 34.7 2.2E+02 0.0076 24.5 10.1 58 250-314 79-139 (216)
479 3slk_A Polyketide synthase ext 34.6 38 0.0013 35.4 5.0 93 155-286 345-441 (795)
480 3l6b_A Serine racemase; pyrido 34.4 51 0.0018 30.6 5.5 46 148-193 168-213 (346)
481 3qsg_A NAD-binding phosphogluc 34.4 2.5E+02 0.0087 25.1 11.0 112 156-312 24-140 (312)
482 2qxy_A Response regulator; reg 34.2 1.4E+02 0.0048 22.3 7.3 39 250-289 47-85 (142)
483 1gdh_A D-glycerate dehydrogena 34.1 89 0.003 28.6 7.1 38 153-194 143-181 (320)
484 3ubt_Y Modification methylase 34.1 1E+02 0.0035 27.7 7.4 39 158-201 2-40 (331)
485 3kl4_A SRP54, signal recogniti 33.9 3.3E+02 0.011 26.2 12.0 59 250-311 178-241 (433)
486 3vrd_B FCCB subunit, flavocyto 33.9 39 0.0013 31.2 4.6 37 156-194 2-38 (401)
487 4e12_A Diketoreductase; oxidor 33.9 1.3E+02 0.0045 26.5 8.1 40 156-199 4-43 (283)
488 4e7p_A Response regulator; DNA 33.5 1.5E+02 0.0052 22.5 7.6 49 240-289 54-104 (150)
489 2v3c_C SRP54, signal recogniti 33.4 90 0.0031 30.1 7.2 41 250-290 179-222 (432)
490 4g2n_A D-isomer specific 2-hyd 33.2 1E+02 0.0036 28.7 7.5 38 154-195 171-208 (345)
491 2rjn_A Response regulator rece 33.1 1.6E+02 0.0055 22.4 7.6 40 250-289 50-89 (154)
492 2gn0_A Threonine dehydratase c 32.9 56 0.0019 30.1 5.5 49 146-194 178-226 (342)
493 4gbj_A 6-phosphogluconate dehy 32.5 68 0.0023 29.0 5.9 113 157-313 6-119 (297)
494 1np3_A Ketol-acid reductoisome 32.5 1E+02 0.0034 28.4 7.2 35 156-194 16-50 (338)
495 3ek2_A Enoyl-(acyl-carrier-pro 32.3 1.3E+02 0.0046 25.6 7.7 40 153-194 11-51 (271)
496 3t8y_A CHEB, chemotaxis respon 32.2 1.8E+02 0.0061 22.7 8.0 40 250-290 70-109 (164)
497 1ny1_A Probable polysaccharide 32.2 56 0.0019 28.6 5.1 49 266-316 179-227 (240)
498 3i83_A 2-dehydropantoate 2-red 32.1 1.3E+02 0.0043 27.2 7.7 34 250-285 70-103 (320)
499 3kcq_A Phosphoribosylglycinami 32.0 1.9E+02 0.0064 25.2 8.5 123 155-314 7-141 (215)
500 1v71_A Serine racemase, hypoth 32.0 46 0.0016 30.4 4.7 45 149-193 167-211 (323)
No 1
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.88 E-value=1.1e-22 Score=191.47 Aligned_cols=166 Identities=16% Similarity=0.242 Sum_probs=129.5
Q ss_pred hHHHHHHHHHhhc----CCCEEEEEcCcchHHHHHHHHHhccCC-CCcEEEEEeCCCCChhhhhhhcccC----cc--cc
Q 041517 142 SYGAVFGNLIDKV----RPRVIIEVGSFLGASALHMANLTRQLG-LDSQILCIDDFRGWPGFRDKFKEIP----MV--NG 210 (327)
Q Consensus 142 ~~g~lL~~L~~~~----~p~~VLEIGt~~G~Sal~lA~a~r~l~-~~~~V~~ID~~~~~~~~A~~~~~~~----~~--~g 210 (327)
.+..+|..|++.+ .|++||||||+.|+|+++||++++..+ ++++|++||+|+++++........+ .. .+
T Consensus 89 ~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~ 168 (282)
T 2wk1_A 89 KRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNS 168 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHH
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccc
Confidence 3456777776653 499999999999999999999876554 4899999999999876443210000 00 00
Q ss_pred -chHHHHHHHHHHhhhccC-CcccceEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 211 -NVLLYFQFLQNVIYQNAI-DSVLPVPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 211 -~~~~~~~Fl~nv~~~g~~-~~v~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
.....+.+.+|+...|+. ++ |++..|++.++|+.+ +++|||||||+++ |+++..+|+.++++|+|||+|++||
T Consensus 169 ~~~~~~~~ar~n~~~~gl~~~~---I~li~Gda~etL~~~~~~~~d~vfIDaD~-y~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 169 VLAVSEEEVRRNFRNYDLLDEQ---VRFLPGWFKDTLPTAPIDTLAVLRMDGDL-YESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp HHCCCHHHHHHHHHHTTCCSTT---EEEEESCHHHHSTTCCCCCEEEEEECCCS-HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred cchhHHHHHHHHHHHcCCCcCc---eEEEEeCHHHHHhhCCCCCEEEEEEcCCc-cccHHHHHHHHHhhcCCCEEEEEcC
Confidence 001234567788888873 66 999999999999887 4799999999997 7778899999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHHHHcCCeEEE
Q 041517 288 YFTAADNRGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 288 ~~~~~~~~GV~~Av~~f~~~~gl~v~~ 314 (327)
|.+ ++|+++||++|++.+++++..
T Consensus 245 ~~~---~~G~~~Av~Ef~~~~~i~~~i 268 (282)
T 2wk1_A 245 YMM---CPPCKDAVDEYRAKFDIADEL 268 (282)
T ss_dssp CTT---CHHHHHHHHHHHHHTTCCSCC
T ss_pred CCC---CHHHHHHHHHHHHhcCCceEE
Confidence 965 699999999999999976543
No 2
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.84 E-value=3.1e-21 Score=174.46 Aligned_cols=154 Identities=18% Similarity=0.157 Sum_probs=120.5
Q ss_pred hHHHHHHHHHhhcCCC---EEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPR---VIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQF 218 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~---~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~F 218 (327)
.++++|..|++..+++ +|||||||+|+++++||++ ++++++|++||.++.+.+.+++
T Consensus 40 ~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~---~~~~~~v~~vD~~~~~~~~a~~----------------- 99 (221)
T 3dr5_A 40 MTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNG---LADNTTLTCIDPESEHQRQAKA----------------- 99 (221)
T ss_dssp HHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHH---SCTTSEEEEECSCHHHHHHHHH-----------------
T ss_pred HHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHH-----------------
Confidence 6788999999888888 9999999999999999995 5678999999999999988876
Q ss_pred HHHHhhhccC-CcccceEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCC----
Q 041517 219 LQNVIYQNAI-DSVLPVPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAA---- 292 (327)
Q Consensus 219 l~nv~~~g~~-~~v~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~---- 292 (327)
|+...+.. ++ |++..+++.+.++.+ +++||+||+|+.+.. ...+++.+.++|+|||+|++||+.|..
T Consensus 100 --~~~~~g~~~~~---i~~~~gda~~~l~~~~~~~fD~V~~d~~~~~--~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~ 172 (221)
T 3dr5_A 100 --LFREAGYSPSR---VRFLLSRPLDVMSRLANDSYQLVFGQVSPMD--LKALVDAAWPLLRRGGALVLADALLDGTIAD 172 (221)
T ss_dssp --HHHHTTCCGGG---EEEECSCHHHHGGGSCTTCEEEEEECCCTTT--HHHHHHHHHHHEEEEEEEEETTTTGGGTCSC
T ss_pred --HHHHcCCCcCc---EEEEEcCHHHHHHHhcCCCcCeEEEcCcHHH--HHHHHHHHHHHcCCCcEEEEeCCCCCCcCCC
Confidence 44444554 44 899999999988877 689999999998754 347899999999999999999999831
Q ss_pred -C--ch---hHHHHHHHHHHHcCCe--EEEccceEEEe
Q 041517 293 -D--NR---GVRRAVNLFAKINGLK--VQIDGQHWVIH 322 (327)
Q Consensus 293 -~--~~---GV~~Av~~f~~~~gl~--v~~~gq~w~i~ 322 (327)
. .+ ++++..+.+.+..+++ +.+.|..-.|.
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~~ 210 (221)
T 3dr5_A 173 QTRKDRDTQAARDADEYIRSIEGAHVARLPLGAGLTVV 210 (221)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEEE
T ss_pred CCCCChHHHHHHHHHHHHhhCCCeeEEEeeccchHHHH
Confidence 1 11 2344444444444544 55667666554
No 3
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.83 E-value=1.9e-20 Score=171.39 Aligned_cols=153 Identities=21% Similarity=0.256 Sum_probs=120.9
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++++|..++...++++|||||||+|+++++||++ ++++++|++||+++.+.+.+++ |
T Consensus 47 ~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~---~~~~~~v~~iD~~~~~~~~a~~-------------------~ 104 (242)
T 3r3h_A 47 EQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLA---LPDDGQVITCDINEGWTKHAHP-------------------Y 104 (242)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHT---SCTTCEEEEEECCCSSCCCSHH-------------------H
T ss_pred HHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHH-------------------H
Confidence 57889999998889999999999999999999995 5668999999999999988876 4
Q ss_pred HhhhccCCcccceEeeecchhhhhhhc-----CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCC---
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEW-----GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAAD--- 293 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l-----~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~--- 293 (327)
+...+..++ |++..+++.+.++.+ .++||+||+|+.+. ....+++.+.++|+|||+|++||+.|...
T Consensus 105 ~~~~g~~~~---i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~~~--~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~ 179 (242)
T 3r3h_A 105 WREAKQEHK---IKLRLGPALDTLHSLLNEGGEHQFDFIFIDADKT--NYLNYYELALKLVTPKGLIAIDNIFWDGKVID 179 (242)
T ss_dssp HHHTTCTTT---EEEEESCHHHHHHHHHHHHCSSCEEEEEEESCGG--GHHHHHHHHHHHEEEEEEEEEECSSSSSCSSC
T ss_pred HHHcCCCCc---EEEEEcCHHHHHHHHhhccCCCCEeEEEEcCChH--HhHHHHHHHHHhcCCCeEEEEECCccCCcccC
Confidence 444555555 899999999887765 57999999999863 45578999999999999999999998321
Q ss_pred -------chhHHHHHHHHHHHcCCe--EEEccceEEE
Q 041517 294 -------NRGVRRAVNLFAKINGLK--VQIDGQHWVI 321 (327)
Q Consensus 294 -------~~GV~~Av~~f~~~~gl~--v~~~gq~w~i 321 (327)
..+++++.+.+.+..+++ +.+.|....|
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~ 216 (242)
T 3r3h_A 180 PNDTSGQTREIKKLNQVIKNDSRVFVSLLAIADGMFL 216 (242)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCCSEEEEEESSSSCEEE
T ss_pred ccccChHHHHHHHHHHHHhhCCCEEEEEEEccCceEE
Confidence 113555555555556665 4455555544
No 4
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.80 E-value=4.1e-19 Score=164.90 Aligned_cols=155 Identities=17% Similarity=0.191 Sum_probs=115.8
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhcc---CCCCcEEEEEeCCCCChhhhhhhcccC-ccccch-------HHHHHHHH---
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQ---LGLDSQILCIDDFRGWPGFRDKFKEIP-MVNGNV-------LLYFQFLQ--- 220 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~---l~~~~~V~~ID~~~~~~~~A~~~~~~~-~~~g~~-------~~~~~Fl~--- 220 (327)
-|+.|+|+||+.|.|++.+|.+... .+++.+|+++|+|+|+++...+..... ...|.. ....+.++
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 4899999999999999998874322 246899999999999997543211100 011110 11111111
Q ss_pred HHhhhcc-CCcccceEeeecchhhhhhhc-----CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCc
Q 041517 221 NVIYQNA-IDSVLPVPFSSGSALTKLCEW-----GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADN 294 (327)
Q Consensus 221 nv~~~g~-~~~v~~V~~~~gda~~~L~~l-----~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~ 294 (327)
|....+. .++ |.+..|++.++|+.+ +.+|||||||+++ |.++..+++.++++|+|||+|++|||.+ +.|
T Consensus 149 ~~~~~g~~~~~---i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y~~t~~~le~~~p~l~~GGvIv~DD~~~-~~w 223 (257)
T 3tos_A 149 CSDFFGHVTQR---SVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-YEPTKAVLEAIRPYLTKGSIVAFDELDN-PKW 223 (257)
T ss_dssp TTSTTTTSCCS---EEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-HHHHHHHHHHHGGGEEEEEEEEESSTTC-TTC
T ss_pred hhhhcCCCCCc---EEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-cchHHHHHHHHHHHhCCCcEEEEcCCCC-CCC
Confidence 1112232 244 999999999999874 3579999999997 8888999999999999999999999976 678
Q ss_pred hhHHHHHHHHHHHcCCeEEE
Q 041517 295 RGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 295 ~GV~~Av~~f~~~~gl~v~~ 314 (327)
+|+++||++|+..++++++.
T Consensus 224 ~G~~~A~~ef~~~~~~~i~~ 243 (257)
T 3tos_A 224 PGENIAMRKVLGLDHAPLRL 243 (257)
T ss_dssp THHHHHHHHHTCTTSSCCEE
T ss_pred hHHHHHHHHHHhhCCCeEEE
Confidence 99999999999999988764
No 5
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.79 E-value=1.1e-18 Score=160.17 Aligned_cols=122 Identities=23% Similarity=0.229 Sum_probs=103.9
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++++|..+++..++++|||||||+|++++++|+. ++++++|++||.++.+.+.++++
T Consensus 66 ~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~---~~~~~~v~~iD~s~~~~~~a~~~------------------- 123 (247)
T 1sui_A 66 DEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALA---IPEDGKILAMDINKENYELGLPV------------------- 123 (247)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHH---SCTTCEEEEEESCCHHHHHHHHH-------------------
T ss_pred HHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHHH-------------------
Confidence 56789999988888999999999999999999996 56689999999999999888763
Q ss_pred HhhhccCCcccceEeeecchhhhhhhc------CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEW------GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l------~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+...++.++ |++..+++.+.++.+ .++||+||+|+++.. ...+++.+.++|+|||+|++||+.|
T Consensus 124 ~~~~g~~~~---i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~~~--~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 124 IKKAGVDHK---IDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKDN--YLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp HHHTTCGGG---EEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCSTT--HHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred HHHcCCCCC---eEEEECCHHHHHHHHHhccCCCCCEEEEEEcCchHH--HHHHHHHHHHhCCCCeEEEEecCCc
Confidence 333444444 899999998877765 578999999998644 4589999999999999999999987
No 6
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.78 E-value=1.1e-18 Score=158.81 Aligned_cols=153 Identities=19% Similarity=0.122 Sum_probs=117.7
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++++|..+++..++++|||||||+|++++++|+. ++++++|++||.++.+.+.+++ |
T Consensus 57 ~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~---~~~~~~v~~iD~~~~~~~~a~~-------------------~ 114 (237)
T 3c3y_A 57 LAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALS---IPDDGKITAIDFDREAYEIGLP-------------------F 114 (237)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH---SCTTCEEEEEESCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHH-------------------H
Confidence 56789999988888999999999999999999996 5668999999999999988876 3
Q ss_pred HhhhccCCcccceEeeecchhhhhhhc------CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCC--
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEW------GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAAD-- 293 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l------~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~-- 293 (327)
+...|..++ |++..+++.+.++.+ .++||+||+|+++.. ...+++.+.++|+|||+|++||+.|...
T Consensus 115 ~~~~g~~~~---i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~~~~--~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~ 189 (237)
T 3c3y_A 115 IRKAGVEHK---INFIESDAMLALDNLLQGQESEGSYDFGFVDADKPN--YIKYHERLMKLVKVGGIVAYDNTLWGGTVA 189 (237)
T ss_dssp HHHTTCGGG---EEEEESCHHHHHHHHHHSTTCTTCEEEEEECSCGGG--HHHHHHHHHHHEEEEEEEEEECTTGGGGGG
T ss_pred HHHcCCCCc---EEEEEcCHHHHHHHHHhccCCCCCcCEEEECCchHH--HHHHHHHHHHhcCCCeEEEEecCCcCCccC
Confidence 334454444 899999999887765 578999999988743 4588999999999999999999887311
Q ss_pred -------------chhHHHHHHHHHHHcCCe--EEEccceEEE
Q 041517 294 -------------NRGVRRAVNLFAKINGLK--VQIDGQHWVI 321 (327)
Q Consensus 294 -------------~~GV~~Av~~f~~~~gl~--v~~~gq~w~i 321 (327)
...++++.+.+....++. +.+.|....|
T Consensus 190 ~~~~~~~~~~r~~~~~i~~~~~~l~~~~~~~~~~lp~~dG~~~ 232 (237)
T 3c3y_A 190 QPESEVPDFMKENREAVIELNKLLAADPRIEIVHLPLGDGITF 232 (237)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEE
T ss_pred CCcccchhhHHHHHHHHHHHHHHHhcCCCeEEEEEEeCCceEE
Confidence 112334555555556654 4455555544
No 7
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.78 E-value=3.9e-19 Score=158.39 Aligned_cols=194 Identities=21% Similarity=0.283 Sum_probs=136.2
Q ss_pred CCCCcCCCccccccccCcCCCChHHHHHHHHHhhcCCCCCCCCCCCchhhhhhhhhccCCchHHHHHHHHHhhcCCCEEE
Q 041517 81 LPPSLLDNFRVTTRCAADSVPPQLVRQTIIDRIFNGTSPYVNFPPPHISHLLRRRRIKGWGSYGAVFGNLIDKVRPRVII 160 (327)
Q Consensus 81 ~~~~~~d~~~~~~~~~~~~~~~~~v~~~~l~~~f~~~s~y~~~p~~~v~~~~~~~~~~gw~~~g~lL~~L~~~~~p~~VL 160 (327)
+.|..+++|. .. ...+.+.+.+.+.+.... .+.|...+. ..++++|..++...++.+||
T Consensus 5 ~~~~~~~~y~----~~-~~~~~~~~l~~~~~~~~~-----~~~~~~~~~-----------~~~~~~l~~l~~~~~~~~vL 63 (223)
T 3duw_A 5 ETWTAVDQYV----SD-VLIPKDSTLEEVLQVNAA-----ANLPAHDVS-----------PTQGKFLQLLVQIQGARNIL 63 (223)
T ss_dssp HHHHHHHHHH----HH-HHSCCCHHHHHHHHHHHH-----TTCCSCSCC-----------HHHHHHHHHHHHHHTCSEEE
T ss_pred ccHHHHHHHH----HH-hCCCCCHHHHHHHHHHhh-----CCCCCcccC-----------HHHHHHHHHHHHhhCCCEEE
Confidence 4577778887 33 444555565555543221 122222111 25677889888888899999
Q ss_pred EEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEeeecc
Q 041517 161 EVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPFSSGS 240 (327)
Q Consensus 161 EIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~~~gd 240 (327)
|||||+|++++++|+. ++++++|+++|.++.+.+.+++ |+...+..++ +.+..++
T Consensus 64 diG~G~G~~~~~la~~---~~~~~~v~~vD~~~~~~~~a~~-------------------~~~~~~~~~~---v~~~~~d 118 (223)
T 3duw_A 64 EIGTLGGYSTIWLARG---LSSGGRVVTLEASEKHADIARS-------------------NIERANLNDR---VEVRTGL 118 (223)
T ss_dssp EECCTTSHHHHHHHTT---CCSSCEEEEEESCHHHHHHHHH-------------------HHHHTTCTTT---EEEEESC
T ss_pred EecCCccHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHH-------------------HHHHcCCCCc---EEEEEcC
Confidence 9999999999999985 5557899999999998887766 4444455445 8899999
Q ss_pred hhhhhhhcC----CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCC----------chhHHHHHHHHHH
Q 041517 241 ALTKLCEWG----VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAAD----------NRGVRRAVNLFAK 306 (327)
Q Consensus 241 a~~~L~~l~----~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~----------~~GV~~Av~~f~~ 306 (327)
+.+.++.+. .+||+||+|+.+. .....++.+.++|+|||+|+++|+.+... ..++++..+.+..
T Consensus 119 ~~~~~~~~~~~~~~~fD~v~~d~~~~--~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 196 (223)
T 3duw_A 119 ALDSLQQIENEKYEPFDFIFIDADKQ--NNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAA 196 (223)
T ss_dssp HHHHHHHHHHTTCCCCSEEEECSCGG--GHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcCEEEEcCCcH--HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhh
Confidence 988766542 6799999999864 34588999999999999999999998311 1235666666666
Q ss_pred HcCCe--EEEc-----cceEEEe
Q 041517 307 INGLK--VQID-----GQHWVIH 322 (327)
Q Consensus 307 ~~gl~--v~~~-----gq~w~i~ 322 (327)
..++. +.+. |..+.|-
T Consensus 197 ~~~~~~~~~p~~~~~~~dG~~~~ 219 (223)
T 3duw_A 197 EPRVSATALQTVGSKGYDGFIMA 219 (223)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEE
T ss_pred CCCeEEEEEeccCCCCCCeeEEE
Confidence 55554 4455 5555543
No 8
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.77 E-value=2.1e-18 Score=157.73 Aligned_cols=144 Identities=26% Similarity=0.348 Sum_probs=114.2
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
..+++|..++...++.+|||||||+|++++++|+. ++++++|++||+++.+.+.+++ +
T Consensus 50 ~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~---~~~~~~v~~vD~s~~~~~~a~~-------------------~ 107 (248)
T 3tfw_A 50 NQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARE---LPADGQLLTLEADAHHAQVARE-------------------N 107 (248)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTT---SCTTCEEEEEECCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHH-------------------H
Confidence 46788898888888999999999999999999985 5568999999999999888776 4
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcCC--cEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCC-----C-
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWGV--VGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAA-----D- 293 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~~--~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~-----~- 293 (327)
+...+..++ |++..+++.+.++.+.. +||+||+|+... ....+++.+.++|+|||+|+++|+.+.. .
T Consensus 108 ~~~~g~~~~---v~~~~~d~~~~l~~~~~~~~fD~V~~d~~~~--~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~ 182 (248)
T 3tfw_A 108 LQLAGVDQR---VTLREGPALQSLESLGECPAFDLIFIDADKP--NNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQS 182 (248)
T ss_dssp HHHTTCTTT---EEEEESCHHHHHHTCCSCCCCSEEEECSCGG--GHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTC
T ss_pred HHHcCCCCc---EEEEEcCHHHHHHhcCCCCCeEEEEECCchH--HHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccc
Confidence 444455445 89999999988777644 999999999764 3457899999999999999999999831 1
Q ss_pred ----chhHHHHHHHHHHHcCCeE
Q 041517 294 ----NRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 294 ----~~GV~~Av~~f~~~~gl~v 312 (327)
..++++..+.+....++..
T Consensus 183 ~~~~~~~~~~~~~~l~~~~~~~~ 205 (248)
T 3tfw_A 183 ADERVQGVRQFIEMMGAEPRLTA 205 (248)
T ss_dssp CCHHHHHHHHHHHHHHHCTTEEE
T ss_pred cchHHHHHHHHHHHHhhCCCEEE
Confidence 1245566666666666653
No 9
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.75 E-value=4.8e-18 Score=151.92 Aligned_cols=140 Identities=17% Similarity=0.297 Sum_probs=110.3
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
..+++|..++...++.+|||||||+|++++++|+. ++++++|++||.++.+.+.+++ |
T Consensus 45 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~---~~~~~~v~~vD~~~~~~~~a~~-------------------~ 102 (221)
T 3u81_A 45 AKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARL---LQPGARLLTMEINPDCAAITQQ-------------------M 102 (221)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTT---SCTTCEEEEEESCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh---CCCCCEEEEEeCChHHHHHHHH-------------------H
Confidence 56789999988888999999999999999999985 5568999999999999988876 4
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcC-----CcEeEEEEcCCCCCC-cHHHHHHHHHccCCCCeEEEEEcCCCCCCch
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWG-----VVGDLIEIDAGHDFN-SAWADINRAWRILRPGGVIFGHDYFTAADNR 295 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~-----~~fDLIfIDa~h~~~-~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~ 295 (327)
+...++.++ |++..+++.+.++.+. ++||+||+|+.+... .....++.+ ++|+|||+|+++|+.+ +
T Consensus 103 ~~~~~~~~~---v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~----~ 174 (221)
T 3u81_A 103 LNFAGLQDK---VTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV----P 174 (221)
T ss_dssp HHHHTCGGG---EEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC----C
T ss_pred HHHcCCCCc---eEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC----c
Confidence 444455445 8999999988877765 689999999976443 223345555 9999999999999997 4
Q ss_pred hHHHHHHHHHHHcCCe
Q 041517 296 GVRRAVNLFAKINGLK 311 (327)
Q Consensus 296 GV~~Av~~f~~~~gl~ 311 (327)
|.+++++.+.+..+++
T Consensus 175 ~~~~~~~~l~~~~~~~ 190 (221)
T 3u81_A 175 GTPDFLAYVRGSSSFE 190 (221)
T ss_dssp CCHHHHHHHHHCTTEE
T ss_pred chHHHHHHHhhCCCce
Confidence 5566666665555554
No 10
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.74 E-value=3.8e-18 Score=153.23 Aligned_cols=127 Identities=13% Similarity=0.085 Sum_probs=98.7
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++++|+..+ .++++|||||| |+||+|||++ . +++|++||.++++.+.+++ |
T Consensus 19 ~~~~~L~~~l--~~a~~VLEiGt--GySTl~lA~~----~-~g~VvtvE~d~~~~~~ar~-------------------~ 70 (202)
T 3cvo_A 19 AEAEALRMAY--EEAEVILEYGS--GGSTVVAAEL----P-GKHVTSVESDRAWARMMKA-------------------W 70 (202)
T ss_dssp HHHHHHHHHH--HHCSEEEEESC--SHHHHHHHTS----T-TCEEEEEESCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHHh--hCCCEEEEECc--hHHHHHHHHc----C-CCEEEEEeCCHHHHHHHHH-------------------H
Confidence 6788888744 46899999998 7999999983 3 7999999999999988876 4
Q ss_pred Hhhhcc--CCcccceEeeecchhhh--------------hhh-------cC--CcEeEEEEcCCCCCCcHHHHHHHHHcc
Q 041517 222 VIYQNA--IDSVLPVPFSSGSALTK--------------LCE-------WG--VVGDLIEIDAGHDFNSAWADINRAWRI 276 (327)
Q Consensus 222 v~~~g~--~~~v~~V~~~~gda~~~--------------L~~-------l~--~~fDLIfIDa~h~~~~v~~dl~~~~~l 276 (327)
+...|. .++ |.+..|++.+. ++. ++ ++||||||||++.. .++..++++
T Consensus 71 l~~~g~~~~~~---I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~----~~~~~~l~~ 143 (202)
T 3cvo_A 71 LAANPPAEGTE---VNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRV----GCALATAFS 143 (202)
T ss_dssp HHHSCCCTTCE---EEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHH----HHHHHHHHH
T ss_pred HHHcCCCCCCc---eEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCch----hHHHHHHHh
Confidence 444555 455 78888875543 221 23 78999999998742 678888999
Q ss_pred CCCCeEEEEEcCCCCCCchhHHHHHHH
Q 041517 277 LRPGGVIFGHDYFTAADNRGVRRAVNL 303 (327)
Q Consensus 277 L~pGGvIi~dD~~~~~~~~GV~~Av~~ 303 (327)
|+|||+|++||+.+.+.+..+.+.+..
T Consensus 144 l~~GG~Iv~DNv~~r~~y~~v~~~~~~ 170 (202)
T 3cvo_A 144 ITRPVTLLFDDYSQRRWQHQVEEFLGA 170 (202)
T ss_dssp CSSCEEEEETTGGGCSSGGGGHHHHCC
T ss_pred cCCCeEEEEeCCcCCcchHHHHHHHhH
Confidence 999999999998765777777666553
No 11
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.74 E-value=4.4e-18 Score=153.94 Aligned_cols=123 Identities=26% Similarity=0.290 Sum_probs=101.4
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++++|..+++..++++|||||||+|++++++++. ++++++|+++|.++.+.+.++++
T Consensus 59 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~---~~~~~~v~~iD~~~~~~~~a~~~------------------- 116 (232)
T 3cbg_A 59 EQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQ---LPPDGQIIACDQDPNATAIAKKY------------------- 116 (232)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTT---SCTTCEEEEEESCHHHHHHHHHH-------------------
T ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHHH-------------------
Confidence 56788898888888999999999999999999985 55578999999999998888763
Q ss_pred HhhhccCCcccceEeeecchhhhhhhc---C--CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCC
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEW---G--VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTA 291 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l---~--~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~ 291 (327)
+...+..++ +.+..+++.+.++.+ + ++||+||+|+.. ......++.+.++|+|||+|+++|+.|.
T Consensus 117 ~~~~g~~~~---i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 117 WQKAGVAEK---ISLRLGPALATLEQLTQGKPLPEFDLIFIDADK--RNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp HHHHTCGGG---EEEEESCHHHHHHHHHTSSSCCCEEEEEECSCG--GGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred HHHcCCCCc---EEEEEcCHHHHHHHHHhcCCCCCcCEEEECCCH--HHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 333344334 888999988876654 2 789999999885 3455889999999999999999999983
No 12
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.73 E-value=1.3e-17 Score=148.47 Aligned_cols=154 Identities=19% Similarity=0.188 Sum_probs=117.1
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.+++++..++...++.+|||||||+|++++++++. ++++++|+++|+++.+.+.+++ +
T Consensus 51 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~---~~~~~~v~~vD~~~~~~~~a~~-------------------~ 108 (225)
T 3tr6_A 51 EQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLA---LPKDGTLITCDVDEKSTALAKE-------------------Y 108 (225)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTT---CCTTCEEEEEESCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHh---CCCCCEEEEEeCCHHHHHHHHH-------------------H
Confidence 56788998888888999999999999999999984 5568999999999999888776 3
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcC-----CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCc--
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWG-----VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADN-- 294 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~-----~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~-- 294 (327)
+...+..++ +.+..+++.+.++.+. ++||+||+|+.. ......++.+.++|+|||+|+++|+.+....
T Consensus 109 ~~~~~~~~~---v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~~--~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~ 183 (225)
T 3tr6_A 109 WEKAGLSDK---IGLRLSPAKDTLAELIHAGQAWQYDLIYIDADK--ANTDLYYEESLKLLREGGLIAVDNVLRRGQVAD 183 (225)
T ss_dssp HHHTTCTTT---EEEEESCHHHHHHHHHTTTCTTCEEEEEECSCG--GGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGC
T ss_pred HHHCCCCCc---eEEEeCCHHHHHHHhhhccCCCCccEEEECCCH--HHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccC
Confidence 444455444 8899999988776653 789999999875 3355789999999999999999999983211
Q ss_pred --------hhHHHHHHHHHHHcCCe--EEEccceEEEe
Q 041517 295 --------RGVRRAVNLFAKINGLK--VQIDGQHWVIH 322 (327)
Q Consensus 295 --------~GV~~Av~~f~~~~gl~--v~~~gq~w~i~ 322 (327)
..+++..+.+....++. +.+.|..+.|-
T Consensus 184 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~ 221 (225)
T 3tr6_A 184 EENQSENNQLIRLFNQKVYKDERVDMILIPIGDGLTLA 221 (225)
T ss_dssp TTCCCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEE
T ss_pred ccccChHHHHHHHHHHHHhcCCCeEEEEEEcCCccEEE
Confidence 12444454554544543 45666666553
No 13
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.72 E-value=3.6e-17 Score=147.77 Aligned_cols=121 Identities=19% Similarity=0.211 Sum_probs=102.2
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
..++++..+++..++.+|||||||+|++++++|+. .++++|++||+++.+.+.+++ +
T Consensus 58 ~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~----~~~~~v~~vD~~~~~~~~a~~-------------------~ 114 (232)
T 3ntv_A 58 LTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASI----SDDIHVTTIERNETMIQYAKQ-------------------N 114 (232)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTT----CTTCEEEEEECCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHh----CCCCEEEEEECCHHHHHHHHH-------------------H
Confidence 45678888888888999999999999999999984 348999999999999988876 3
Q ss_pred HhhhccCCcccceEeeecchhhhhh-hcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLC-EWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~-~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+...++.++ +.+..+++.+.++ .++++||+||+|+.... ....++.+.++|+|||+|++||+.|
T Consensus 115 ~~~~~~~~~---v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~--~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 115 LATYHFENQ---VRIIEGNALEQFENVNDKVYDMIFIDAAKAQ--SKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp HHHTTCTTT---EEEEESCGGGCHHHHTTSCEEEEEEETTSSS--HHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred HHHcCCCCc---EEEEECCHHHHHHhhccCCccEEEEcCcHHH--HHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 444454444 8999999988877 66789999999987643 4588999999999999999999998
No 14
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.71 E-value=6.9e-17 Score=144.12 Aligned_cols=153 Identities=20% Similarity=0.199 Sum_probs=115.8
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++++|..+++..++++|||||||+|++++++++. ++++++|+++|.++.+.+.+++ +
T Consensus 56 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~---~~~~~~v~~vD~~~~~~~~a~~-------------------~ 113 (229)
T 2avd_A 56 EQAQLLANLARLIQAKKALDLGTFTGYSALALALA---LPADGRVVTCEVDAQPPELGRP-------------------L 113 (229)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTT---SCTTCEEEEEESCSHHHHHHHH-------------------H
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHH-------------------H
Confidence 56788888888888999999999999999999985 4557899999999999888876 3
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcC-----CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCc--
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWG-----VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADN-- 294 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~-----~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~-- 294 (327)
+...+..++ +++..+++.+.++.+. ++||+||+|+... .....++.+.++|+|||+|+++|+.|....
T Consensus 114 ~~~~g~~~~---i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~~--~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~ 188 (229)
T 2avd_A 114 WRQAEAEHK---IDLRLKPALETLDELLAAGEAGTFDVAVVDADKE--NCSAYYERCLQLLRPGGILAVLRVLWRGKVLQ 188 (229)
T ss_dssp HHHTTCTTT---EEEEESCHHHHHHHHHHTTCTTCEEEEEECSCST--THHHHHHHHHHHEEEEEEEEEECCSGGGGGGS
T ss_pred HHHCCCCCe---EEEEEcCHHHHHHHHHhcCCCCCccEEEECCCHH--HHHHHHHHHHHHcCCCeEEEEECCCcCCcccC
Confidence 333444444 8899999888765542 6899999998753 345889999999999999999999873211
Q ss_pred --------hhHHHHHHHHHHHcCCe--EEEccceEEE
Q 041517 295 --------RGVRRAVNLFAKINGLK--VQIDGQHWVI 321 (327)
Q Consensus 295 --------~GV~~Av~~f~~~~gl~--v~~~gq~w~i 321 (327)
..+++..+.+....+++ +.+.|....|
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dGl~~ 225 (229)
T 2avd_A 189 PPKGDVAAECVRNLNERIRRDVRVYISLLPLGDGLTL 225 (229)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEE
T ss_pred cccCChHHHHHHHHHHHHhhCCCEEEEEEecCCceEE
Confidence 13455555555555554 4455665554
No 15
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.70 E-value=6.4e-17 Score=143.10 Aligned_cols=122 Identities=17% Similarity=0.208 Sum_probs=100.4
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++.++..++...++++|||||||+|++++++++. ++++++|+++|+++.+.+.++++
T Consensus 43 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~---~~~~~~v~~vD~~~~~~~~a~~~------------------- 100 (210)
T 3c3p_A 43 QTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARA---ISISSRVVMIDPDRDNVEHARRM------------------- 100 (210)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTT---SCTTCEEEEEESCHHHHHHHHHH-------------------
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHHH-------------------
Confidence 45678888887778999999999999999999985 45579999999999998888763
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCC
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTA 291 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~ 291 (327)
+...+..++ +++..+++.+.++.+++ ||+||+|+... .....++.+.++|+|||+|+++|+.|.
T Consensus 101 ~~~~~~~~~---v~~~~~d~~~~~~~~~~-fD~v~~~~~~~--~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 101 LHDNGLIDR---VELQVGDPLGIAAGQRD-IDILFMDCDVF--NGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp HHHHSGGGG---EEEEESCHHHHHTTCCS-EEEEEEETTTS--CHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred HHHCCCCce---EEEEEecHHHHhccCCC-CCEEEEcCChh--hhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 333343334 88999999887776667 99999998764 345889999999999999999999873
No 16
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.62 E-value=3e-15 Score=135.20 Aligned_cols=153 Identities=24% Similarity=0.319 Sum_probs=112.2
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++.+|..++...++.+|||||||+|++++.+++. ++++++|+++|.++.+.+.++++
T Consensus 47 ~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~---~~~~~~v~~vD~~~~~~~~a~~~------------------- 104 (239)
T 2hnk_A 47 EEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASA---LPEDGKILCCDVSEEWTNVARKY------------------- 104 (239)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHH---SCTTCEEEEEESCHHHHHHHHHH-------------------
T ss_pred HHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHHH-------------------
Confidence 55678888887778999999999999999999985 45578999999999988877763
Q ss_pred HhhhccCCcccceEeeecchhhhhhhc---------------C-CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEE
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEW---------------G-VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l---------------~-~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
+...+..++ +.+..+++.+.++.+ + ++||+|++|+.. ......++.+.++|+|||+|++
T Consensus 105 ~~~~g~~~~---v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~--~~~~~~l~~~~~~L~pgG~lv~ 179 (239)
T 2hnk_A 105 WKENGLENK---IFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK--ENYPNYYPLILKLLKPGGLLIA 179 (239)
T ss_dssp HHHTTCGGG---EEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG--GGHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHcCCCCC---EEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCH--HHHHHHHHHHHHHcCCCeEEEE
Confidence 333343333 888889888766543 2 789999999765 3445889999999999999999
Q ss_pred EcCCCCCC------ch----hHHHHHHHHHHHcCCe--EEEccceEEE
Q 041517 286 HDYFTAAD------NR----GVRRAVNLFAKINGLK--VQIDGQHWVI 321 (327)
Q Consensus 286 dD~~~~~~------~~----GV~~Av~~f~~~~gl~--v~~~gq~w~i 321 (327)
+++.|... .. .+++..+.+....++. +.+.+....+
T Consensus 180 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~ 227 (239)
T 2hnk_A 180 DNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLVDVSLVPIADGVSL 227 (239)
T ss_dssp ECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEE
T ss_pred EccccCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEEcCCceEe
Confidence 99887321 11 2344444555555555 4455555443
No 17
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.59 E-value=6.8e-15 Score=133.87 Aligned_cols=136 Identities=20% Similarity=0.289 Sum_probs=101.3
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
+...++..++...++.+|||||||+|+++++||+.++.++++++|++||+++++.+.++..
T Consensus 68 ~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~------------------- 128 (236)
T 2bm8_A 68 DTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD------------------- 128 (236)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG-------------------
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc-------------------
Confidence 3456677777777889999999999999999998644346789999999999998766420
Q ss_pred HhhhccCCcccceEeeecchhhh--hhhcC-CcEeEEEEcCCCCCCcHHHHHHHHHc-cCCCCeEEEEEcCCCCCCchh-
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTK--LCEWG-VVGDLIEIDAGHDFNSAWADINRAWR-ILRPGGVIFGHDYFTAADNRG- 296 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~--L~~l~-~~fDLIfIDa~h~~~~v~~dl~~~~~-lL~pGGvIi~dD~~~~~~~~G- 296 (327)
..+ |++..+++.+. ++... .+||+|++|+.|. .....++++.+ +|+|||+++++|+. +.+++
T Consensus 129 ------~~~---v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~~~--~~~~~l~~~~r~~LkpGG~lv~~d~~--~~~~~~ 195 (236)
T 2bm8_A 129 ------MEN---ITLHQGDCSDLTTFEHLREMAHPLIFIDNAHA--NTFNIMKWAVDHLLEEGDYFIIEDMI--PYWYRY 195 (236)
T ss_dssp ------CTT---EEEEECCSSCSGGGGGGSSSCSSEEEEESSCS--SHHHHHHHHHHHTCCTTCEEEECSCH--HHHHHH
T ss_pred ------CCc---eEEEECcchhHHHHHhhccCCCCEEEECCchH--hHHHHHHHHHHhhCCCCCEEEEEeCc--cccccc
Confidence 112 78888887764 44443 3799999999985 45678999996 99999999999872 22222
Q ss_pred HHHHHHHHHHHcC
Q 041517 297 VRRAVNLFAKING 309 (327)
Q Consensus 297 V~~Av~~f~~~~g 309 (327)
-.+.+.++.+..+
T Consensus 196 ~~~~~~~~l~~~~ 208 (236)
T 2bm8_A 196 APQLFSEYLGAFR 208 (236)
T ss_dssp CHHHHHHHHHTTT
T ss_pred CHHHHHHHHHhCc
Confidence 1236777777663
No 18
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.53 E-value=2.2e-14 Score=128.73 Aligned_cols=122 Identities=22% Similarity=0.217 Sum_probs=98.2
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
..+.++..++...++.+|||||||+|++++.+++. + ++++|+++|.++.+.+.+++ +
T Consensus 41 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~---~-~~~~v~~vD~~~~~~~~a~~-------------------~ 97 (233)
T 2gpy_A 41 LGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQA---L-PEATIVSIERDERRYEEAHK-------------------H 97 (233)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHH---C-TTCEEEEECCCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHH---C-CCCEEEEEECCHHHHHHHHH-------------------H
Confidence 44567777777778899999999999999999995 3 37899999999998887766 3
Q ss_pred HhhhccCCcccceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCC
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTA 291 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~ 291 (327)
+...+..++ +.+..+++.+.++.. +++||+|++|+... .....++.+.++|+|||+++++|+.+.
T Consensus 98 ~~~~~~~~~---v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~--~~~~~l~~~~~~L~pgG~lv~~~~~~~ 164 (233)
T 2gpy_A 98 VKALGLESR---IELLFGDALQLGEKLELYPLFDVLFIDAAKG--QYRRFFDMYSPMVRPGGLILSDNVLFR 164 (233)
T ss_dssp HHHTTCTTT---EEEECSCGGGSHHHHTTSCCEEEEEEEGGGS--CHHHHHHHHGGGEEEEEEEEEETTTC-
T ss_pred HHHcCCCCc---EEEEECCHHHHHHhcccCCCccEEEECCCHH--HHHHHHHHHHHHcCCCeEEEEEcCCcC
Confidence 333344334 888889888866665 57899999998753 455889999999999999999999873
No 19
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.40 E-value=1.6e-12 Score=111.87 Aligned_cols=126 Identities=10% Similarity=-0.008 Sum_probs=85.9
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|..++.+|+. +++|+++|.++.+.+.+++ ++...+. ++ +
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~------~~~v~~vD~s~~~l~~a~~-------------------~~~~~~~-~~---v 72 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL------SKKVYAFDVQEQALGKTSQ-------------------RLSDLGI-EN---T 72 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT------SSEEEEEESCHHHHHHHHH-------------------HHHHHTC-CC---E
T ss_pred CCCEEEEEcCCCCHHHHHHHHh------CCEEEEEECCHHHHHHHHH-------------------HHHHcCC-Cc---E
Confidence 3579999999999999999973 7899999999999988876 3333333 23 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEc-CCCCC---------CcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHH
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEID-AGHDF---------NSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLF 304 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfID-a~h~~---------~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f 304 (327)
.+..++..+.....+++||+|+.+ +.... ......++.+.+.|+|||++++..+...+....-.+.+.++
T Consensus 73 ~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 152 (185)
T 3mti_A 73 ELILDGHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEY 152 (185)
T ss_dssp EEEESCGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHH
T ss_pred EEEeCcHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence 777766554322336789999988 22211 23346689999999999999988775433223345666667
Q ss_pred HHHcC
Q 041517 305 AKING 309 (327)
Q Consensus 305 ~~~~g 309 (327)
+....
T Consensus 153 ~~~l~ 157 (185)
T 3mti_A 153 VIGLD 157 (185)
T ss_dssp HHHSC
T ss_pred HHhCC
Confidence 66543
No 20
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.40 E-value=6.9e-12 Score=109.92 Aligned_cols=126 Identities=18% Similarity=0.132 Sum_probs=94.8
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..+..+|||||||+|..++.+++. ++..+|+++|.++.+.+.+++ |+...+. ++
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~----~~~~~v~~vD~s~~~~~~a~~-------------------~~~~~~~-~~-- 91 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNL----MPNGRIFALERNPQYLGFIRD-------------------NLKKFVA-RN-- 91 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHH----CTTSEEEEEECCHHHHHHHHH-------------------HHHHHTC-TT--
T ss_pred CCCCCEEEEECCCCCHHHHHHHHH----CCCCEEEEEeCCHHHHHHHHH-------------------HHHHhCC-Cc--
Confidence 345679999999999999999985 457999999999999888776 3333333 23
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
+.+..++..+.+... ..||+|+++.... .....++.+.+.|+|||++++.+... .-...+..+++..|+.+
T Consensus 92 -v~~~~~d~~~~~~~~-~~~D~i~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~-----~~~~~~~~~l~~~g~~~ 162 (204)
T 3e05_A 92 -VTLVEAFAPEGLDDL-PDPDRVFIGGSGG--MLEEIIDAVDRRLKSEGVIVLNAVTL-----DTLTKAVEFLEDHGYMV 162 (204)
T ss_dssp -EEEEECCTTTTCTTS-CCCSEEEESCCTT--CHHHHHHHHHHHCCTTCEEEEEECBH-----HHHHHHHHHHHHTTCEE
T ss_pred -EEEEeCChhhhhhcC-CCCCEEEECCCCc--CHHHHHHHHHHhcCCCeEEEEEeccc-----ccHHHHHHHHHHCCCce
Confidence 888888887655443 6799999998653 45688999999999999999977654 22344555566777654
Q ss_pred E
Q 041517 313 Q 313 (327)
Q Consensus 313 ~ 313 (327)
.
T Consensus 163 ~ 163 (204)
T 3e05_A 163 E 163 (204)
T ss_dssp E
T ss_pred e
Confidence 3
No 21
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.37 E-value=4.9e-12 Score=107.48 Aligned_cols=124 Identities=15% Similarity=0.120 Sum_probs=90.8
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..++.+++. .++.+++++|+++.+.+.+++ ++...+..++ +
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~----~~~~~v~~vD~~~~~~~~a~~-------------------~~~~~~~~~~---~ 78 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRS----TPQTTAVCFEISEERRERILS-------------------NAINLGVSDR---I 78 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTT----SSSEEEEEECSCHHHHHHHHH-------------------HHHTTTCTTS---E
T ss_pred CCCeEEEeCCCCCHHHHHHHHH----CCCCeEEEEeCCHHHHHHHHH-------------------HHHHhCCCCC---E
Confidence 4569999999999999999984 247899999999998888766 3333344334 6
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeEE
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v~ 313 (327)
+..++..+.++...+.||+|+++....+ ...++.+.+.|+|||++++.+... +.. ..+..+.+..+.++.
T Consensus 79 -~~~~d~~~~~~~~~~~~D~i~~~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~----~~~-~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 79 -AVQQGAPRAFDDVPDNPDVIFIGGGLTA---PGVFAAAWKRLPVGGRLVANAVTV----ESE-QMLWALRKQFGGTIS 148 (178)
T ss_dssp -EEECCTTGGGGGCCSCCSEEEECC-TTC---TTHHHHHHHTCCTTCEEEEEECSH----HHH-HHHHHHHHHHCCEEE
T ss_pred -EEecchHhhhhccCCCCCEEEECCcccH---HHHHHHHHHhcCCCCEEEEEeecc----ccH-HHHHHHHHHcCCeeE
Confidence 6667777766665578999999876544 368899999999999999988764 233 334444555565543
No 22
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.36 E-value=9.7e-12 Score=110.22 Aligned_cols=123 Identities=15% Similarity=0.166 Sum_probs=92.0
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..+..+|||||||+|..++.+|+. +.+|++||.++.+.+.+++ |+...+..++
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~-------------------~~~~~g~~~~-- 105 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA------GGRAITIEPRADRIENIQK-------------------NIDTYGLSPR-- 105 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHH-------------------HHHHTTCTTT--
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc------CCEEEEEeCCHHHHHHHHH-------------------HHHHcCCCCC--
Confidence 334679999999999999999983 7899999999999988876 3433444434
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
+.+..+++.+.++.. ..||+|++++.. ... .++.+.+.|+|||++++..+.. ... ..+.++.+..|+++
T Consensus 106 -v~~~~~d~~~~~~~~-~~~D~v~~~~~~---~~~-~l~~~~~~LkpgG~lv~~~~~~----~~~-~~~~~~l~~~g~~i 174 (204)
T 3njr_A 106 -MRAVQGTAPAALADL-PLPEAVFIGGGG---SQA-LYDRLWEWLAPGTRIVANAVTL----ESE-TLLTQLHARHGGQL 174 (204)
T ss_dssp -EEEEESCTTGGGTTS-CCCSEEEECSCC---CHH-HHHHHHHHSCTTCEEEEEECSH----HHH-HHHHHHHHHHCSEE
T ss_pred -EEEEeCchhhhcccC-CCCCEEEECCcc---cHH-HHHHHHHhcCCCcEEEEEecCc----ccH-HHHHHHHHhCCCcE
Confidence 888899988865543 579999999854 233 8899999999999999987764 233 33344445566665
Q ss_pred E
Q 041517 313 Q 313 (327)
Q Consensus 313 ~ 313 (327)
.
T Consensus 175 ~ 175 (204)
T 3njr_A 175 L 175 (204)
T ss_dssp E
T ss_pred E
Confidence 4
No 23
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.35 E-value=8e-13 Score=119.82 Aligned_cols=122 Identities=18% Similarity=0.067 Sum_probs=88.5
Q ss_pred ccCCchHHHHHHHHHhhc--CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHH
Q 041517 137 IKGWGSYGAVFGNLIDKV--RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLL 214 (327)
Q Consensus 137 ~~gw~~~g~lL~~L~~~~--~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~ 214 (327)
+..|. ..+++.+++.. +.++|||||||+|.++.++++. . ..++++||+++++.+.|++...
T Consensus 42 m~~we--~~~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~----~-~~~v~~id~~~~~~~~a~~~~~---------- 104 (236)
T 3orh_A 42 MERWE--TPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEA----P-IDEHWIIECNDGVFQRLRDWAP---------- 104 (236)
T ss_dssp EEGGG--HHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTS----C-EEEEEEEECCHHHHHHHHHHGG----------
T ss_pred HHHHH--HHHHHHHHHhhccCCCeEEEECCCccHHHHHHHHh----C-CcEEEEEeCCHHHHHHHHHHHh----------
Confidence 45672 23555555433 4579999999999999999873 2 4689999999999988876431
Q ss_pred HHHHHHHHhhhccCCcccceEeeecchhhhhhhc-CCcEeEEEEcCCCC------CCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 215 YFQFLQNVIYQNAIDSVLPVPFSSGSALTKLCEW-GVVGDLIEIDAGHD------FNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 215 ~~~Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~------~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
..+. .+++..+++.+.+..+ +++||.|+.|.... .......++++.++|||||++++.+
T Consensus 105 ---------~~~~-----~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 105 ---------RQTH-----KVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ---------GCSS-----EEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ---------hCCC-----ceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 1121 2778888888876554 47899999996532 2234567889999999999999977
Q ss_pred CC
Q 041517 288 YF 289 (327)
Q Consensus 288 ~~ 289 (327)
..
T Consensus 171 ~~ 172 (236)
T 3orh_A 171 LT 172 (236)
T ss_dssp HH
T ss_pred cC
Confidence 43
No 24
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.35 E-value=7.3e-12 Score=108.63 Aligned_cols=117 Identities=13% Similarity=0.072 Sum_probs=88.4
Q ss_pred HHHHHHhh--cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 146 VFGNLIDK--VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 146 lL~~L~~~--~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
++..+... .+..+|||+|||+|..++.+++. ...+|+++|.++.+.+.+++ |+.
T Consensus 33 l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~-----~~~~v~~vD~~~~~~~~a~~-------------------~~~ 88 (189)
T 3p9n_A 33 LFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-----GAASVLFVESDQRSAAVIAR-------------------NIE 88 (189)
T ss_dssp HHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT-----TCSEEEEEECCHHHHHHHHH-------------------HHH
T ss_pred HHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC-----CCCeEEEEECCHHHHHHHHH-------------------HHH
Confidence 44444433 46789999999999999987762 25689999999999988876 333
Q ss_pred hhccCCcccceEeeecchhhhhhhc-CCcEeEEEEcCCCCC--CcHHHHHHHHHc--cCCCCeEEEEEcCCC
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEW-GVVGDLIEIDAGHDF--NSAWADINRAWR--ILRPGGVIFGHDYFT 290 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~--~~v~~dl~~~~~--lL~pGGvIi~dD~~~ 290 (327)
..+. ++ +.+..+|+.+.+..+ +++||+|++|..... +.....++.+.+ +|+|||++++.....
T Consensus 89 ~~~~-~~---v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 89 ALGL-SG---ATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp HHTC-SC---EEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred HcCC-Cc---eEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 3343 23 889999998876554 589999999976433 345567888888 999999999977654
No 25
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.34 E-value=2.6e-12 Score=118.71 Aligned_cols=126 Identities=15% Similarity=0.070 Sum_probs=94.6
Q ss_pred HHHHHHHhhcC-CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 145 AVFGNLIDKVR-PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 145 ~lL~~L~~~~~-p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
+++..|.+..+ .++|||||||+|..+..|++. ..+|++||+++.|.+.|++..
T Consensus 28 ~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~------~~~v~gvD~s~~ml~~a~~~~-------------------- 81 (257)
T 4hg2_A 28 ALFRWLGEVAPARGDALDCGCGSGQASLGLAEF------FERVHAVDPGEAQIRQALRHP-------------------- 81 (257)
T ss_dssp HHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTT------CSEEEEEESCHHHHHTCCCCT--------------------
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHh------CCEEEEEeCcHHhhhhhhhcC--------------------
Confidence 35566655543 478999999999999999874 579999999998887654311
Q ss_pred hhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHH
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNL 303 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~ 303 (327)
+ |.+..+++.+ ++..+++||+|+.-....+-+....+.++.++|||||++++-++......+.+.+.++.
T Consensus 82 ------~---v~~~~~~~e~-~~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~ 151 (257)
T 4hg2_A 82 ------R---VTYAVAPAED-TGLPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDR 151 (257)
T ss_dssp ------T---EEEEECCTTC-CCCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHH
T ss_pred ------C---ceeehhhhhh-hcccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHH
Confidence 1 7777777655 34446899999986543344566789999999999999999888775555677777777
Q ss_pred HHH
Q 041517 304 FAK 306 (327)
Q Consensus 304 f~~ 306 (327)
+..
T Consensus 152 ~~~ 154 (257)
T 4hg2_A 152 LYH 154 (257)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 26
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.32 E-value=4.8e-12 Score=108.19 Aligned_cols=118 Identities=14% Similarity=0.028 Sum_probs=86.0
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..+.+..+..+|||+|||+|..++.+++. ...+|+++|+++.+.+.+++ |+...
T Consensus 22 ~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-----~~~~v~~vD~~~~~~~~a~~-------------------~~~~~ 77 (177)
T 2esr_A 22 IFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-----GMSAAVLVEKNRKAQAIIQD-------------------NIIMT 77 (177)
T ss_dssp HHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-----TCCEEEEECCCHHHHHHHHH-------------------HHHTT
T ss_pred HHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-----CCCEEEEEECCHHHHHHHHH-------------------HHHHc
Confidence 4444432345789999999999999999873 25799999999999888776 33333
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHH--ccCCCCeEEEEEcCCC
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAW--RILRPGGVIFGHDYFT 290 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~--~lL~pGGvIi~dD~~~ 290 (327)
++.++ +.+..++..+.++.....||+|++|...........++.+. ++|+|||++++.....
T Consensus 78 ~~~~~---~~~~~~d~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 78 KAENR---FTLLKMEAERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp TCGGG---EEEECSCHHHHHHHBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCc---eEEEECcHHHhHHhhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 33333 88889998887666667899999986531122334566665 9999999999876654
No 27
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.32 E-value=5.5e-12 Score=119.25 Aligned_cols=107 Identities=12% Similarity=0.069 Sum_probs=85.1
Q ss_pred HHhhcCCCEEEEEcCcchH-HHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccC
Q 041517 150 LIDKVRPRVIIEVGSFLGA-SALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI 228 (327)
Q Consensus 150 L~~~~~p~~VLEIGt~~G~-Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~ 228 (327)
+++..++.+|||||||+|. +++.+|+. ++++|++||+++++.+.|++ ++...|.
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~-----~ga~V~gIDis~~~l~~Ar~-------------------~~~~~gl- 171 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHV-----YGMRVNVVEIEPDIAELSRK-------------------VIEGLGV- 171 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHT-----TCCEEEEEESSHHHHHHHHH-------------------HHHHHTC-
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHc-----cCCEEEEEECCHHHHHHHHH-------------------HHHhcCC-
Confidence 4555568999999999875 55667662 37899999999999998877 3444455
Q ss_pred CcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 229 DSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 229 ~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
++ |++..+++.+ ++ +++||+||+++.. +.....++++.+.|+|||++++.++.
T Consensus 172 ~~---v~~v~gDa~~-l~--d~~FDvV~~~a~~--~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 172 DG---VNVITGDETV-ID--GLEFDVLMVAALA--EPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp CS---EEEEESCGGG-GG--GCCCSEEEECTTC--SCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CC---eEEEECchhh-CC--CCCcCEEEECCCc--cCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 44 8999999887 34 5789999998874 45568899999999999999998854
No 28
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.31 E-value=9.6e-12 Score=108.08 Aligned_cols=129 Identities=16% Similarity=0.124 Sum_probs=93.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|..++.+++. +++.++++++|.++.+.+.+++ ++...+..++ +
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~---~~~~~~v~~vD~s~~~~~~a~~-------------------~~~~~~~~~~---v 76 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASL---VGENGRVFGFDIQDKAIANTTK-------------------KLTDLNLIDR---V 76 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHH---HCTTCEEEEECSCHHHHHHHHH-------------------HHHHTTCGGG---E
T ss_pred CCCEEEEcCCCCCHHHHHHHHH---hCCCCEEEEEECCHHHHHHHHH-------------------HHHHcCCCCC---e
Confidence 4579999999999999999985 4556899999999999888776 3333333233 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCC-C---------CCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHH
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGH-D---------FNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLF 304 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h-~---------~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f 304 (327)
.+..++..+.....+++||+|+.+... . .......++.+.++|+|||++++.++...+....-...+..+
T Consensus 77 ~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~ 156 (197)
T 3eey_A 77 TLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEF 156 (197)
T ss_dssp EEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHH
T ss_pred EEEECCHHHHhhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHH
Confidence 888998876543456899999988532 0 112356899999999999999998876533333345666666
Q ss_pred HHHc
Q 041517 305 AKIN 308 (327)
Q Consensus 305 ~~~~ 308 (327)
+...
T Consensus 157 ~~~l 160 (197)
T 3eey_A 157 LKGV 160 (197)
T ss_dssp HTTS
T ss_pred HHhC
Confidence 6543
No 29
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.29 E-value=2.3e-11 Score=107.35 Aligned_cols=147 Identities=12% Similarity=-0.047 Sum_probs=97.5
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
.+..++...++.+|||||||+|..+..+++. ++..+++++|+++.+.+.+++.. ...
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~gvD~s~~~~~~a~~~~-------------------~~~ 76 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGNLLSLLLKD----KSFEQITGVDVSYSVLERAKDRL-------------------KID 76 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHTS----TTCCEEEEEESCHHHHHHHHHHH-------------------TGG
T ss_pred HHHHHHhhcCCCEEEEecCCCCHHHHHHHhc----CCCCEEEEEECCHHHHHHHHHHH-------------------Hhh
Confidence 3444445557899999999999999999873 44689999999999988887632 111
Q ss_pred ccCCc-ccceEeeecchhhhhhhcCCcEeEEEEcCCCCC-C--cHHHHHHHHHccCCCCeEEEEEcCCCC-C--------
Q 041517 226 NAIDS-VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF-N--SAWADINRAWRILRPGGVIFGHDYFTA-A-------- 292 (327)
Q Consensus 226 g~~~~-v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~--~v~~dl~~~~~lL~pGGvIi~dD~~~~-~-------- 292 (327)
++.+. ...+.+..++... ++...++||+|+......+ . .....++.+.+.|+|||+++....... .
T Consensus 77 ~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~ 155 (219)
T 3jwg_A 77 RLPEMQRKRISLFQSSLVY-RDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEG 155 (219)
T ss_dssp GSCHHHHTTEEEEECCSSS-CCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT---
T ss_pred ccccccCcceEEEeCcccc-cccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcc
Confidence 21110 0017788887633 2333478999997654322 3 225779999999999998887544320 0
Q ss_pred -----------CchhHHHHHHHHHHHcCCeEEEcc
Q 041517 293 -----------DNRGVRRAVNLFAKINGLKVQIDG 316 (327)
Q Consensus 293 -----------~~~GV~~Av~~f~~~~gl~v~~~g 316 (327)
.....++.+..+++..|+++...|
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~ 190 (219)
T 3jwg_A 156 NLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQ 190 (219)
T ss_dssp --GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred cccccCceeeecHHHHHHHHHHHHHHCCcEEEEEe
Confidence 112255556688888898887543
No 30
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.27 E-value=3.3e-11 Score=108.74 Aligned_cols=126 Identities=13% Similarity=0.014 Sum_probs=90.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..++.+|.. .++.+|++||+++.+.+.+++ |+...+.. . +
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~----~~~~~v~~vD~s~~~~~~a~~-------------------~~~~~~~~-~---v 122 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKIC----FPHLHVTIVDSLNKRITFLEK-------------------LSEALQLE-N---T 122 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHH----CTTCEEEEEESCHHHHHHHHH-------------------HHHHHTCS-S---E
T ss_pred CCCEEEEecCCCCHHHHHHHHh----CCCCEEEEEeCCHHHHHHHHH-------------------HHHHcCCC-C---E
Confidence 5689999999999999999974 347899999999999988876 33333332 2 8
Q ss_pred Eeeecchhhhhh--hcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 235 PFSSGSALTKLC--EWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 235 ~~~~gda~~~L~--~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
.+..+++.+... ...++||+|+.++- ......++.+.++|+|||++++.+... .......+...++..|+++
T Consensus 123 ~~~~~d~~~~~~~~~~~~~fD~V~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~g~~---~~~~~~~~~~~l~~~g~~~ 196 (240)
T 1xdz_A 123 TFCHDRAETFGQRKDVRESYDIVTARAV---ARLSVLSELCLPLVKKNGLFVALKAAS---AEEELNAGKKAITTLGGEL 196 (240)
T ss_dssp EEEESCHHHHTTCTTTTTCEEEEEEECC---SCHHHHHHHHGGGEEEEEEEEEEECC----CHHHHHHHHHHHHHTTEEE
T ss_pred EEEeccHHHhcccccccCCccEEEEecc---CCHHHHHHHHHHhcCCCCEEEEEeCCC---chHHHHHHHHHHHHcCCeE
Confidence 888998877431 12578999999884 345678999999999999998865432 1222233444556677665
Q ss_pred E
Q 041517 313 Q 313 (327)
Q Consensus 313 ~ 313 (327)
.
T Consensus 197 ~ 197 (240)
T 1xdz_A 197 E 197 (240)
T ss_dssp E
T ss_pred e
Confidence 3
No 31
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.27 E-value=5.5e-11 Score=104.97 Aligned_cols=147 Identities=11% Similarity=-0.072 Sum_probs=98.8
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
.+..++...++.+|||||||+|..+..+++. ++..+++++|+++.+.+.+++.. ...
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~gvD~s~~~~~~a~~~~-------------------~~~ 76 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLLKILLKD----SFFEQITGVDVSYRSLEIAQERL-------------------DRL 76 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHHC----TTCSEEEEEESCHHHHHHHHHHH-------------------TTC
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHHHHHHhh----CCCCEEEEEECCHHHHHHHHHHH-------------------HHh
Confidence 3444445557889999999999999999983 44679999999999988877632 212
Q ss_pred ccCCc-ccceEeeecchhhhhhhcCCcEeEEEEcCCCCC-C--cHHHHHHHHHccCCCCeEEEEEcCCCC----------
Q 041517 226 NAIDS-VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF-N--SAWADINRAWRILRPGGVIFGHDYFTA---------- 291 (327)
Q Consensus 226 g~~~~-v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~--~v~~dl~~~~~lL~pGGvIi~dD~~~~---------- 291 (327)
++.+. ...+.+..++... ++...++||+|+......+ . .....++.+.+.|+|||++++.+....
T Consensus 77 ~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~ 155 (217)
T 3jwh_A 77 RLPRNQWERLQLIQGALTY-QDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAG 155 (217)
T ss_dssp CCCHHHHTTEEEEECCTTS-CCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----
T ss_pred cCCcccCcceEEEeCCccc-ccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccc
Confidence 21110 0017888887533 2333478999997654322 2 235779999999999998887654310
Q ss_pred ----------CCchhHHHHHHHHHHHcCCeEEEcc
Q 041517 292 ----------ADNRGVRRAVNLFAKINGLKVQIDG 316 (327)
Q Consensus 292 ----------~~~~GV~~Av~~f~~~~gl~v~~~g 316 (327)
......++.+..+++..|+++...|
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~ 190 (217)
T 3jwh_A 156 KLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQP 190 (217)
T ss_dssp ------CCSCBCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred cccccccccccCHHHHHHHHHHHHHHcCceEEEEe
Confidence 0122355566688899999887654
No 32
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.27 E-value=9.3e-12 Score=122.17 Aligned_cols=110 Identities=16% Similarity=0.110 Sum_probs=84.0
Q ss_pred HHHHHHHhhc--CCCEEEEEcCc------chHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHH
Q 041517 145 AVFGNLIDKV--RPRVIIEVGSF------LGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYF 216 (327)
Q Consensus 145 ~lL~~L~~~~--~p~~VLEIGt~------~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~ 216 (327)
.++..+++.. ++.+||||||| +|.+++.+++. +.++++|++||+++.|.. .
T Consensus 204 ~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~---~fP~a~V~GVDiSp~m~~---~--------------- 262 (419)
T 3sso_A 204 PHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKS---FFPRGQIYGLDIMDKSHV---D--------------- 262 (419)
T ss_dssp HHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHH---HCTTCEEEEEESSCCGGG---C---------------
T ss_pred HHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHH---hCCCCEEEEEECCHHHhh---c---------------
Confidence 3555554433 57899999999 77777887764 446899999999998631 0
Q ss_pred HHHHHHhhhccCCcccceEeeecchhhhhhhc------CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 217 QFLQNVIYQNAIDSVLPVPFSSGSALTKLCEW------GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 217 ~Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l------~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
..+ +.+..+|+.+. +.. .++||+|+.|+.|........|++++++|||||++++.|+.+
T Consensus 263 -----------~~r---I~fv~GDa~dl-pf~~~l~~~d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 263 -----------ELR---IRTIQGDQNDA-EFLDRIARRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp -----------BTT---EEEEECCTTCH-HHHHHHHHHHCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred -----------CCC---cEEEEeccccc-chhhhhhcccCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 011 77888887652 222 478999999999977777889999999999999999999983
No 33
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.27 E-value=1.5e-11 Score=105.31 Aligned_cols=110 Identities=14% Similarity=0.093 Sum_probs=81.1
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.+..+|||+|||+|..++.+++. ...+|+++|.++.+.+.+++ |+...+..++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-----~~~~v~~vD~~~~~~~~a~~-------------------~~~~~~~~~~--- 95 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-----GMDKSICIEKNFAALKVIKE-------------------NIAITKEPEK--- 95 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-----TCSEEEEEESCHHHHHHHHH-------------------HHHHHTCGGG---
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-----CCCEEEEEECCHHHHHHHHH-------------------HHHHhCCCcc---
Confidence 35689999999999999998872 25799999999999888776 3333333333
Q ss_pred eEeeecchhhhhhhc---CCcEeEEEEcCCCCCCcHHHHHHHH--HccCCCCeEEEEEcCCC
Q 041517 234 VPFSSGSALTKLCEW---GVVGDLIEIDAGHDFNSAWADINRA--WRILRPGGVIFGHDYFT 290 (327)
Q Consensus 234 V~~~~gda~~~L~~l---~~~fDLIfIDa~h~~~~v~~dl~~~--~~lL~pGGvIi~dD~~~ 290 (327)
+.+..+|..+.++.+ +.+||+|++|...........++.+ .++|+|||++++.....
T Consensus 96 ~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 96 FEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp EEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred eEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 888899988865433 5789999999662222334556666 88999999999876554
No 34
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.27 E-value=3.1e-11 Score=111.57 Aligned_cols=119 Identities=18% Similarity=0.277 Sum_probs=85.8
Q ss_pred HHHHHHHhh-cC-CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHH
Q 041517 145 AVFGNLIDK-VR-PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNV 222 (327)
Q Consensus 145 ~lL~~L~~~-~~-p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv 222 (327)
.++..|++. .+ ..+|||||||+|..++.|++.+ ..++.+|++||+++.|.+.|++ ++
T Consensus 58 ~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~--~~~~~~v~gvD~s~~ml~~A~~-------------------~~ 116 (261)
T 4gek_A 58 SMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNI--HHDNCKIIAIDNSPAMIERCRR-------------------HI 116 (261)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTC--CSSSCEEEEEESCHHHHHHHHH-------------------HH
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhc--CCCCCEEEEEECCHHHHHHHHH-------------------HH
Confidence 344444443 33 4699999999999999999852 1346799999999999998876 33
Q ss_pred hhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC-C--cHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 223 IYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF-N--SAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 223 ~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~--~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
...+...+ |++..+|..+ ++. +.||+|++-....+ + .....++++.+.|+|||++++.|...
T Consensus 117 ~~~~~~~~---v~~~~~D~~~-~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 117 DAYKAPTP---VDVIEGDIRD-IAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp HTSCCSSC---EEEEESCTTT-CCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred HhhccCce---EEEeeccccc-ccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 33343334 8888888765 232 57999987654322 2 22356899999999999999987765
No 35
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.27 E-value=5e-11 Score=101.86 Aligned_cols=137 Identities=9% Similarity=0.053 Sum_probs=95.8
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCC-ccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAID-SVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~-~v~ 232 (327)
.+..+|||+|||+|..+..+++. +.+++++|+++.+.+.+++. +...+..+ +
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~------~~~v~~~D~~~~~~~~a~~~-------------------~~~~~~~~~~-- 103 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE------VKSTTMADINRRAIKLAKEN-------------------IKLNNLDNYD-- 103 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHH-------------------HHHTTCTTSC--
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc------CCeEEEEECCHHHHHHHHHH-------------------HHHcCCCccc--
Confidence 35679999999999999998873 68999999999988877652 32223322 2
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCC--CcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHH-cC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDF--NSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKI-NG 309 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~--~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~-~g 309 (327)
+.+..++..+.++ +++||+|+++..... ......++.+.++|+|||++++.+... .+..+..+.+.+. ..
T Consensus 104 -~~~~~~d~~~~~~--~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l~~~~~~ 176 (194)
T 1dus_A 104 -IRVVHSDLYENVK--DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK----QGAKSLAKYMKDVFGN 176 (194)
T ss_dssp -EEEEECSTTTTCT--TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST----HHHHHHHHHHHHHHSC
T ss_pred -eEEEECchhcccc--cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC----CChHHHHHHHHHHhcc
Confidence 7777787766433 468999999875322 334577899999999999999988765 2333333333322 25
Q ss_pred CeEEEccceEEEecc
Q 041517 310 LKVQIDGQHWVIHSA 324 (327)
Q Consensus 310 l~v~~~gq~w~i~~~ 324 (327)
+++......|.+-..
T Consensus 177 ~~~~~~~~~~~~~~~ 191 (194)
T 1dus_A 177 VETVTIKGGYRVLKS 191 (194)
T ss_dssp CEEEEEETTEEEEEE
T ss_pred eEEEecCCcEEEEEE
Confidence 677777777776543
No 36
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.26 E-value=9.8e-12 Score=112.10 Aligned_cols=108 Identities=23% Similarity=0.143 Sum_probs=84.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. . .++|+++|+++.+.+.+++ ++...+..++ +
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~----~-~~~v~~vD~s~~~~~~a~~-------------------~~~~~~~~~~---~ 98 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADY----V-KGQITGIDLFPDFIEIFNE-------------------NAVKANCADR---V 98 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH----C-CSEEEEEESCHHHHHHHHH-------------------HHHHTTCTTT---E
T ss_pred CCCeEEEeCCCCCHHHHHHHHh----C-CCeEEEEECCHHHHHHHHH-------------------HHHHcCCCCc---e
Confidence 4579999999999999999985 2 2499999999998887765 3334454444 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+..++..+ ++..+++||+|+......+-+....++.+.++|+|||++++.+..|
T Consensus 99 ~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 153 (257)
T 3f4k_A 99 KGITGSMDN-LPFQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASW 153 (257)
T ss_dssp EEEECCTTS-CSSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred EEEECChhh-CCCCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 888888744 3433579999998865444456788999999999999999998654
No 37
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.26 E-value=2.8e-11 Score=106.76 Aligned_cols=118 Identities=14% Similarity=0.084 Sum_probs=85.6
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..+....+..+|||+|||+|..++.+++. + ..+|++||.++.+.+.+++ |+...
T Consensus 44 l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~----~-~~~v~gvD~s~~~l~~a~~-------------------~~~~~ 99 (201)
T 2ift_A 44 LFNWLMPYIHQSECLDGFAGSGSLGFEALSR----Q-AKKVTFLELDKTVANQLKK-------------------NLQTL 99 (201)
T ss_dssp HHHHHHHHHTTCEEEETTCTTCHHHHHHHHT----T-CSEEEEECSCHHHHHHHHH-------------------HHHHT
T ss_pred HHHHHHHhcCCCeEEEcCCccCHHHHHHHHc----c-CCEEEEEECCHHHHHHHHH-------------------HHHHh
Confidence 3444433336789999999999999987763 2 3699999999999988876 33333
Q ss_pred ccC-CcccceEeeecchhhhhhhc-CCc-EeEEEEcCCCCCCcHHHHHHHH--HccCCCCeEEEEEcCCC
Q 041517 226 NAI-DSVLPVPFSSGSALTKLCEW-GVV-GDLIEIDAGHDFNSAWADINRA--WRILRPGGVIFGHDYFT 290 (327)
Q Consensus 226 g~~-~~v~~V~~~~gda~~~L~~l-~~~-fDLIfIDa~h~~~~v~~dl~~~--~~lL~pGGvIi~dD~~~ 290 (327)
+.. ++ +.+..+|+.+.++.+ +++ ||+|++|...........++.+ .++|+|||++++.....
T Consensus 100 ~~~~~~---v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 100 KCSSEQ---AEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp TCCTTT---EEEECSCHHHHTTSCCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCccc---eEEEECCHHHHHHhhccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 332 23 889999988866543 468 9999999773234445567777 67899999998876654
No 38
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.25 E-value=6.7e-11 Score=100.87 Aligned_cols=126 Identities=18% Similarity=0.169 Sum_probs=91.8
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
...+..+|||+|||+|..+..+++. ..+++++|.++.+.+.+++ ++...+...+
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~------~~~v~~~D~~~~~~~~a~~-------------------~~~~~~~~~~- 83 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGR------VRRVYAIDRNPEAISTTEM-------------------NLQRHGLGDN- 83 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTT------SSEEEEEESCHHHHHHHHH-------------------HHHHTTCCTT-
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHh------cCEEEEEECCHHHHHHHHH-------------------HHHHcCCCcc-
Confidence 3445689999999999999999874 2899999999988887765 3333333233
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCe
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLK 311 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~ 311 (327)
+.+..++..+.++.. ..||+|+++... +.....++.+.+.|+|||++++.++.. ... ..+.+++++.|++
T Consensus 84 --~~~~~~d~~~~~~~~-~~~D~v~~~~~~--~~~~~~l~~~~~~l~~gG~l~~~~~~~----~~~-~~~~~~l~~~g~~ 153 (192)
T 1l3i_A 84 --VTLMEGDAPEALCKI-PDIDIAVVGGSG--GELQEILRIIKDKLKPGGRIIVTAILL----ETK-FEAMECLRDLGFD 153 (192)
T ss_dssp --EEEEESCHHHHHTTS-CCEEEEEESCCT--TCHHHHHHHHHHTEEEEEEEEEEECBH----HHH-HHHHHHHHHTTCC
T ss_pred --eEEEecCHHHhcccC-CCCCEEEECCch--HHHHHHHHHHHHhcCCCcEEEEEecCc----chH-HHHHHHHHHCCCc
Confidence 788888877755442 489999998763 345688999999999999999987754 223 3445555667765
Q ss_pred EE
Q 041517 312 VQ 313 (327)
Q Consensus 312 v~ 313 (327)
+.
T Consensus 154 ~~ 155 (192)
T 1l3i_A 154 VN 155 (192)
T ss_dssp CE
T ss_pred eE
Confidence 43
No 39
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.24 E-value=2.2e-11 Score=115.06 Aligned_cols=112 Identities=12% Similarity=0.059 Sum_probs=84.7
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc-CCccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA-IDSVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~-~~~v~ 232 (327)
..+++|||||||+|.++..+++. .+..+|++||+++.+.+.++++.. .+. .++ ..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~----~~~~~v~~vDid~~~i~~ar~~~~----------------~~~-~~~~~~r-- 150 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKH----PSVESVVQCEIDEDVIQVSKKFLP----------------GMA-IGYSSSK-- 150 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC----TTCCEEEEEESCHHHHHHHHHHCH----------------HHH-GGGGCTT--
T ss_pred CCCCEEEEECCCchHHHHHHHHc----CCCCEEEEEECCHHHHHHHHHHhH----------------Hhh-cccCCCc--
Confidence 46889999999999999999873 457899999999999998887532 110 122 223
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCc-----HHHHHHHHHccCCCCeEEEEEcCC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNS-----AWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~-----v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+++..+|+.+.++..+++||+|++|......+ ....++.+.++|+|||+++++...
T Consensus 151 -v~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 151 -LTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp -EEEEESCHHHHHHTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -EEEEECcHHHHHhhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 88899999887776668999999998653211 135789999999999999998743
No 40
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.23 E-value=3.1e-11 Score=114.76 Aligned_cols=111 Identities=12% Similarity=0.041 Sum_probs=83.2
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc-CCccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA-IDSVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~-~~~v~ 232 (327)
..+++|||||||+|.++..+++. .+..+|++||+++.+.+.|+++.. .. ..++ ..+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~----~~~~~v~~vDid~~~i~~Ar~~~~----------------~~-~~~~~~~r-- 163 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKH----ESVEKVTMCEIDEMVIDVAKKFLP----------------GM-SCGFSHPK-- 163 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTC----TTCCEEEEECSCHHHHHHHHHHCT----------------TT-SGGGGCTT--
T ss_pred CCCCEEEEEcCCcCHHHHHHHHc----CCCCEEEEEECCHHHHHHHHHHHH----------------Hh-ccccCCCC--
Confidence 46789999999999999999873 457899999999999998887542 10 0011 223
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcH-----HHHHHHHHccCCCCeEEEEEcC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSA-----WADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v-----~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+++..+|+.+.++..+++||+|++|......+. ...++.+.++|+|||+++++..
T Consensus 164 -v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 164 -LDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp -EEEECSCHHHHHHHCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred -EEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 889999998877665678999999985432111 4778999999999999999864
No 41
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.23 E-value=4.2e-11 Score=105.70 Aligned_cols=109 Identities=15% Similarity=0.032 Sum_probs=81.3
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.+..+|||+|||+|..++.+++. + ..+|++||.++.+.+.+++ |+...+. ++
T Consensus 53 ~~~~~vLDlgcG~G~~~~~l~~~----~-~~~V~~vD~s~~~l~~a~~-------------------~~~~~~~-~~--- 104 (202)
T 2fpo_A 53 IVDAQCLDCFAGSGALGLEALSR----Y-AAGATLIEMDRAVSQQLIK-------------------NLATLKA-GN--- 104 (202)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHT----T-CSEEEEECSCHHHHHHHHH-------------------HHHHTTC-CS---
T ss_pred cCCCeEEEeCCCcCHHHHHHHhc----C-CCEEEEEECCHHHHHHHHH-------------------HHHHcCC-Cc---
Confidence 36789999999999999987763 2 3599999999999988876 3333333 23
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHc--cCCCCeEEEEEcCCC
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWR--ILRPGGVIFGHDYFT 290 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~--lL~pGGvIi~dD~~~ 290 (327)
+.+..+|+.+.++..+.+||+|++|...........++.+.+ +|+|||++++.....
T Consensus 105 v~~~~~D~~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 105 ARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp EEEECSCHHHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred EEEEECCHHHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 889999988876655678999999976223334456666654 599999998876543
No 42
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.22 E-value=1.6e-10 Score=105.14 Aligned_cols=118 Identities=19% Similarity=0.199 Sum_probs=87.7
Q ss_pred HHHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 145 AVFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 145 ~lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++..+++.. +..+|||||||+|..+..+++. . +.+|+++|+++.+.+.+++ +
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~--~~~v~gvD~s~~~~~~a~~-------------------~ 103 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATA---R--DVRVTGISISRPQVNQANA-------------------R 103 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHH---S--CCEEEEEESCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHh---c--CCEEEEEeCCHHHHHHHHH-------------------H
Confidence 3445555543 4679999999999999999984 2 6899999999998887765 3
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcC-CCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDA-GHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+...+..++ +.+..++..+ ++..+++||+|+.-. -+........++.+.+.|+|||++++.+...
T Consensus 104 ~~~~~~~~~---~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 104 ATAAGLANR---VTFSYADAMD-LPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp HHHTTCTTT---EEEEECCTTS-CCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred HHhcCCCcc---eEEEECcccc-CCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 333344444 7888887665 333357899999654 3434556788999999999999999998765
No 43
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.21 E-value=3.3e-11 Score=111.89 Aligned_cols=133 Identities=15% Similarity=0.115 Sum_probs=98.6
Q ss_pred HHhhcC-CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccC
Q 041517 150 LIDKVR-PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI 228 (327)
Q Consensus 150 L~~~~~-p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~ 228 (327)
+.+..+ ..+|||+|||+|..++.+|+. +.. +|+++|.++.+.+.+++ |+...+..
T Consensus 119 l~~~~~~~~~VLDlgcG~G~~~~~la~~----~~~-~V~~vD~s~~~~~~a~~-------------------n~~~n~~~ 174 (278)
T 2frn_A 119 MAKVAKPDELVVDMFAGIGHLSLPIAVY----GKA-KVIAIEKDPYTFKFLVE-------------------NIHLNKVE 174 (278)
T ss_dssp HHHHCCTTCEEEETTCTTTTTHHHHHHH----TCC-EEEEECCCHHHHHHHHH-------------------HHHHTTCT
T ss_pred HHHhCCCCCEEEEecccCCHHHHHHHHh----CCC-EEEEEECCHHHHHHHHH-------------------HHHHcCCC
Confidence 333444 679999999999999999985 222 79999999999988876 44444554
Q ss_pred CcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCC-CCchhHHHHHHHHHHH
Q 041517 229 DSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTA-ADNRGVRRAVNLFAKI 307 (327)
Q Consensus 229 ~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~-~~~~GV~~Av~~f~~~ 307 (327)
++ +.+..+|+.+.+. +.+||+|++|.... ....++.+.+.|+|||++++.++... .......+.+...+..
T Consensus 175 ~~---v~~~~~D~~~~~~--~~~fD~Vi~~~p~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~ 246 (278)
T 2frn_A 175 DR---MSAYNMDNRDFPG--ENIADRILMGYVVR---THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKE 246 (278)
T ss_dssp TT---EEEECSCTTTCCC--CSCEEEEEECCCSS---GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHH
T ss_pred ce---EEEEECCHHHhcc--cCCccEEEECCchh---HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHH
Confidence 44 8888999887544 67899999985532 24678899999999999999887641 1112344566777888
Q ss_pred cCCeEEE
Q 041517 308 NGLKVQI 314 (327)
Q Consensus 308 ~gl~v~~ 314 (327)
.|+++..
T Consensus 247 ~G~~~~~ 253 (278)
T 2frn_A 247 YGYDVEK 253 (278)
T ss_dssp TTCEEEE
T ss_pred cCCeeEE
Confidence 8888765
No 44
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.21 E-value=6.1e-11 Score=107.88 Aligned_cols=133 Identities=11% Similarity=0.037 Sum_probs=101.0
Q ss_pred HHHHHhhcCC-CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 147 FGNLIDKVRP-RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 147 L~~L~~~~~p-~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
|+.+.+..++ .+|+|||||+|+.++.+|. .++..+|+++|+++++.+.|++ |+...
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~----~~~~~~V~avDi~~~al~~A~~-------------------N~~~~ 62 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVE----RGQIKSAIAGEVVEGPYQSAVK-------------------NVEAH 62 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHH----TTSEEEEEEEESSHHHHHHHHH-------------------HHHHT
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHH----hCCCCEEEEEECCHHHHHHHHH-------------------HHHHc
Confidence 4556666655 5899999999999999998 3567899999999999988876 66666
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHH
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFA 305 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~ 305 (327)
|+.++ |.+..+|..+.++. +.+||+|++-+.- .+-...-++.+...|++||.+|+.-.. | ...+..++
T Consensus 63 gl~~~---i~~~~~d~l~~l~~-~~~~D~IviaG~G-g~~i~~Il~~~~~~L~~~~~lVlq~~~------~-~~~vr~~L 130 (225)
T 3kr9_A 63 GLKEK---IQVRLANGLAAFEE-TDQVSVITIAGMG-GRLIARILEEGLGKLANVERLILQPNN------R-EDDLRIWL 130 (225)
T ss_dssp TCTTT---EEEEECSGGGGCCG-GGCCCEEEEEEEC-HHHHHHHHHHTGGGCTTCCEEEEEESS------C-HHHHHHHH
T ss_pred CCCce---EEEEECchhhhccc-CcCCCEEEEcCCC-hHHHHHHHHHHHHHhCCCCEEEEECCC------C-HHHHHHHH
Confidence 76666 89999998776543 1269999985542 233567789999999999999985542 2 35666777
Q ss_pred HHcCCeEEE
Q 041517 306 KINGLKVQI 314 (327)
Q Consensus 306 ~~~gl~v~~ 314 (327)
.++|+.+..
T Consensus 131 ~~~Gf~i~~ 139 (225)
T 3kr9_A 131 QDHGFQIVA 139 (225)
T ss_dssp HHTTEEEEE
T ss_pred HHCCCEEEE
Confidence 788887653
No 45
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.21 E-value=4.7e-11 Score=109.87 Aligned_cols=106 Identities=21% Similarity=0.222 Sum_probs=82.6
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
+.+|||||||+|..+..+++. +.+++++|+++.+.+.+++. +...+...+ +.
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~-------------------~~~~~~~~~---v~ 120 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER------GHQVILCDLSAQMIDRAKQA-------------------AEAKGVSDN---MQ 120 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHH-------------------HHC-CCGGG---EE
T ss_pred CCEEEEeCCcchHHHHHHHHC------CCEEEEEECCHHHHHHHHHH-------------------HHhcCCCcc---eE
Confidence 569999999999999999984 67999999999988877663 222233233 88
Q ss_pred eeecchhhhhhhcCCcEeEEEEcCCCC-CCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 236 FSSGSALTKLCEWGVVGDLIEIDAGHD-FNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfIDa~h~-~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+..++..+.....+++||+|+...... .+.....++.+.++|+|||++++.++.
T Consensus 121 ~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 121 FIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp EEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EEEcCHHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 888888775434568999999876532 345678899999999999999998764
No 46
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.21 E-value=2.5e-11 Score=109.36 Aligned_cols=108 Identities=15% Similarity=0.020 Sum_probs=82.8
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.+..+|||||||+|..+..+++. . +.+++++|+++.+.+.+++ ++...++.++
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~---~--~~~v~gvD~s~~~l~~a~~-------------------~~~~~~~~~~--- 87 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARD---H--GITGTGIDMSSLFTAQAKR-------------------RAEELGVSER--- 87 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHH---T--CCEEEEEESCHHHHHHHHH-------------------HHHHTTCTTT---
T ss_pred CCCCEEEEECCCCCHHHHHHHHh---c--CCeEEEEeCCHHHHHHHHH-------------------HHHhcCCCcc---
Confidence 34679999999999999999985 2 5689999999999887765 3333344334
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEc-CCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEID-AGHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfID-a~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+.+..++..+. +. +++||+|+.- ..|........++++.+.|+|||++++.+..+
T Consensus 88 v~~~~~d~~~~-~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 88 VHFIHNDAAGY-VA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp EEEEESCCTTC-CC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred eEEEECChHhC-Cc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 88888887663 33 6789999974 33334456788999999999999999987554
No 47
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.20 E-value=6.4e-11 Score=111.53 Aligned_cols=131 Identities=12% Similarity=0.058 Sum_probs=87.4
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc-CCccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA-IDSVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~-~~~v~ 232 (327)
-++++|||||||+|..+..+++ ..+..+|++||+++.+.+.++++.. ......+ ..+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~----~~~~~~V~~VDid~~vi~~ar~~~~----------------~~~~~~~~~~r-- 139 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTR----HKNVESITMVEIDAGVVSFCRQYLP----------------NHNAGSYDDPR-- 139 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHT----CTTCCEEEEECSCTTHHHHHHHHCH----------------HHHSSCTTCTT--
T ss_pred CCCCEEEEEeCChhHHHHHHHh----CCCCCEEEEEECCHHHHHHHHHhhh----------------hcccccccCCc--
Confidence 3589999999999999999987 3457899999999999999987542 1110001 123
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcH-----HHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHH
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSA-----WADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKI 307 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v-----~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~ 307 (327)
+++..+|+.+.+...+++||+|++|......+. ...++.+.+.|+|||++++...........+++.+..+.+.
T Consensus 140 -v~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~ 218 (294)
T 3adn_A 140 -FKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY 218 (294)
T ss_dssp -CCEECSCSCC---CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred -eEEEEChHHHHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHH
Confidence 788889988877665689999999976433221 46889999999999999987532111123444444444433
No 48
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.20 E-value=2.1e-11 Score=111.19 Aligned_cols=108 Identities=18% Similarity=0.116 Sum_probs=84.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. +..+|+++|+++.+.+.+++ ++...+..++ +
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~-----~~~~v~gvD~s~~~~~~a~~-------------------~~~~~~~~~~---v 98 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH-----VTGQVTGLDFLSGFIDIFNR-------------------NARQSGLQNR---V 98 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT-----CSSEEEEEESCHHHHHHHHH-------------------HHHHTTCTTT---E
T ss_pred CCCEEEEeCCCCCHHHHHHHhc-----cCCEEEEEeCCHHHHHHHHH-------------------HHHHcCCCcC---c
Confidence 4689999999999999999973 36799999999998887766 3333344444 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
++..++..+ ++..+++||+|+.......-.....++.+.++|+|||++++.+..+
T Consensus 99 ~~~~~d~~~-~~~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 153 (267)
T 3kkz_A 99 TGIVGSMDD-LPFRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSW 153 (267)
T ss_dssp EEEECCTTS-CCCCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEE
T ss_pred EEEEcChhh-CCCCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeee
Confidence 888888755 3333578999998865433356788999999999999999998764
No 49
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.20 E-value=5.9e-11 Score=106.58 Aligned_cols=105 Identities=17% Similarity=0.080 Sum_probs=79.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
...+|||||||+|.+++.+|+. .++.+|++||+++.+.+.+++ ++...++. + +
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~----~p~~~v~giD~s~~~l~~a~~-------------------~~~~~~l~-n---v 86 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKD----RPEQDFLGIEVHSPGVGACLA-------------------SAHEEGLS-N---L 86 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHH----CTTSEEEEECSCHHHHHHHHH-------------------HHHHTTCS-S---E
T ss_pred CCCeEEEEeeeChHHHHHHHHH----CCCCeEEEEEecHHHHHHHHH-------------------HHHHhCCC-c---E
Confidence 5679999999999999999985 457899999999998887765 33333332 2 8
Q ss_pred Eeeecchhhhhhh--cCCcEeEEEEcCCCCCCcH---------HHHHHHHHccCCCCeEEEEE
Q 041517 235 PFSSGSALTKLCE--WGVVGDLIEIDAGHDFNSA---------WADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 235 ~~~~gda~~~L~~--l~~~fDLIfIDa~h~~~~v---------~~dl~~~~~lL~pGGvIi~d 286 (327)
++..+|+.+.++. .+++||.|++...-.++.. ...++.+.++|+|||++++.
T Consensus 87 ~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 87 RVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp EEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 8999999887653 2589999998632222111 14789999999999988764
No 50
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.19 E-value=5.2e-11 Score=104.46 Aligned_cols=101 Identities=14% Similarity=0.128 Sum_probs=77.6
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
...+..+|||||||+|+.+..+++. ..+|+++|+++.+.+.+++ ++...+.. +
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~------~~~v~~vD~~~~~~~~a~~-------------------~~~~~~~~-~- 126 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHL------VQHVCSVERIKGLQWQARR-------------------RLKNLDLH-N- 126 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHHH-------------------HHHHTTCC-S-
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHh------CCEEEEEecCHHHHHHHHH-------------------HHHHcCCC-c-
Confidence 3345689999999999999999985 6899999999998887766 33332332 2
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.+..++..+.+.. +++||+|++++...+-. +.+.++|+|||++++.-
T Consensus 127 --v~~~~~d~~~~~~~-~~~~D~i~~~~~~~~~~-----~~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 127 --VSTRHGDGWQGWQA-RAPFDAIIVTAAPPEIP-----TALMTQLDEGGILVLPV 174 (210)
T ss_dssp --EEEEESCGGGCCGG-GCCEEEEEESSBCSSCC-----THHHHTEEEEEEEEEEE
T ss_pred --eEEEECCcccCCcc-CCCccEEEEccchhhhh-----HHHHHhcccCcEEEEEE
Confidence 88888888775433 57899999997654433 46889999999988843
No 51
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.19 E-value=5e-11 Score=100.35 Aligned_cols=105 Identities=12% Similarity=-0.038 Sum_probs=77.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|..++.+++. +.+++++|.++.+.+.+++ |+...+. + +
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~-------------------~~~~~~~--~---~ 90 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE------GWEAVLVEKDPEAVRLLKE-------------------NVRRTGL--G---A 90 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT------TCEEEEECCCHHHHHHHHH-------------------HHHHHTC--C---C
T ss_pred CCCeEEEeCCCcCHHHHHHHHC------CCeEEEEeCCHHHHHHHHH-------------------HHHHcCC--c---e
Confidence 6789999999999999999984 3449999999999888776 3333332 2 7
Q ss_pred Eeeecchhhhhhhc---CCcEeEEEEcCCCCCCcHHHHHHHHH--ccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEW---GVVGDLIEIDAGHDFNSAWADINRAW--RILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l---~~~fDLIfIDa~h~~~~v~~dl~~~~--~lL~pGGvIi~dD~~~ 290 (327)
.+..++..+.++.. +++||+|++|.... ......++.+. ++|+|||++++.....
T Consensus 91 ~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 91 RVVALPVEVFLPEAKAQGERFTVAFMAPPYA-MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEECSCHHHHHHHHHHTTCCEEEEEECCCTT-SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred EEEeccHHHHHHhhhccCCceEEEEECCCCc-hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 88888888755443 34899999996432 22224556665 9999999998876654
No 52
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.19 E-value=1.7e-10 Score=109.23 Aligned_cols=141 Identities=15% Similarity=0.092 Sum_probs=99.2
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.++..++...+..+|||+|||+|..++.+|+. ++..++|+++|+++.+.+.+++ |+..
T Consensus 108 ~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~---~~~~~~v~avD~s~~~l~~a~~-------------------~~~~ 165 (315)
T 1ixk_A 108 MYPPVALDPKPGEIVADMAAAPGGKTSYLAQL---MRNDGVIYAFDVDENRLRETRL-------------------NLSR 165 (315)
T ss_dssp HHHHHHHCCCTTCEEEECCSSCSHHHHHHHHH---TTTCSEEEEECSCHHHHHHHHH-------------------HHHH
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHH---hCCCCEEEEEcCCHHHHHHHHH-------------------HHHH
Confidence 34445555445679999999999999999985 4557899999999998887765 4443
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC-------Cc----------------HHHHHHHHHccCCCCe
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF-------NS----------------AWADINRAWRILRPGG 281 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-------~~----------------v~~dl~~~~~lL~pGG 281 (327)
.|.. . +.+..+|+.+. +..+++||+|++|+.... +. ....++.+.++|+|||
T Consensus 166 ~g~~-~---v~~~~~D~~~~-~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG 240 (315)
T 1ixk_A 166 LGVL-N---VILFHSSSLHI-GELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGG 240 (315)
T ss_dssp HTCC-S---EEEESSCGGGG-GGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred hCCC-e---EEEEECChhhc-ccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3432 2 78888887764 334678999999954211 11 1367889999999999
Q ss_pred EEEEEcCCCCCCchhHHHHHHHHHHHcCCeEEE
Q 041517 282 VIFGHDYFTAADNRGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 282 vIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v~~ 314 (327)
++++..+...+ ..-...+..|.++.++++..
T Consensus 241 ~lv~stcs~~~--~Ene~~v~~~l~~~~~~~~~ 271 (315)
T 1ixk_A 241 ILVYSTCSLEP--EENEFVIQWALDNFDVELLP 271 (315)
T ss_dssp EEEEEESCCCG--GGTHHHHHHHHHHSSEEEEC
T ss_pred EEEEEeCCCCh--HHhHHHHHHHHhcCCCEEec
Confidence 99998876532 12234566777777766544
No 53
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.19 E-value=8.3e-11 Score=109.40 Aligned_cols=112 Identities=12% Similarity=0.069 Sum_probs=86.1
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc-CCccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA-IDSVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~-~~~v~ 232 (327)
..+++|||||||+|..+..+++ ..+..+|++||+++.+.+.++++.. .+. .++ ..+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~----~~~~~~v~~vEid~~~v~~ar~~~~----------------~~~-~~~~~~r-- 130 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILK----HPSVKKATLVDIDGKVIEYSKKFLP----------------SIA-GKLDDPR-- 130 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTT----CTTCSEEEEEESCHHHHHHHHHHCH----------------HHH-TTTTSTT--
T ss_pred CCCCEEEEECCchHHHHHHHHh----CCCCceEEEEECCHHHHHHHHHHhH----------------hhc-cccCCCc--
Confidence 3689999999999999999886 3346899999999999998887532 111 012 223
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCc-----HHHHHHHHHccCCCCeEEEEEcCC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNS-----AWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~-----v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+++..+|+.+.++..+++||+|++|......+ ....++.+.+.|+|||++++....
T Consensus 131 -v~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 131 -VDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp -EEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred -eEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 88999999887776668999999997653211 247899999999999999998543
No 54
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.19 E-value=6.9e-11 Score=106.85 Aligned_cols=113 Identities=17% Similarity=0.195 Sum_probs=86.5
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
.+..++...+..+|||+|||+|..++.+++. +++.++++++|.++.+.+.+++ |+...
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~~~~v~~~D~~~~~~~~a~~-------------------~~~~~ 141 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANI---VGPEGRVVSYEIREDFAKLAWE-------------------NIKWA 141 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---HCTTSEEEEECSCHHHHHHHHH-------------------HHHHH
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHH---hCCCeEEEEEecCHHHHHHHHH-------------------HHHHc
Confidence 3333444445789999999999999999985 4678999999999998888766 34444
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+..++ +.+..+|..+.++ +.+||+|++|... .+..++.+.+.|+|||++++....
T Consensus 142 ~~~~~---v~~~~~d~~~~~~--~~~~D~v~~~~~~----~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 142 GFDDR---VTIKLKDIYEGIE--EENVDHVILDLPQ----PERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp TCTTT---EEEECSCGGGCCC--CCSEEEEEECSSC----GGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CCCCc---eEEEECchhhccC--CCCcCEEEECCCC----HHHHHHHHHHHcCCCCEEEEEECC
Confidence 55444 8888888876533 3679999997542 346899999999999999986544
No 55
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.18 E-value=3.1e-10 Score=98.86 Aligned_cols=117 Identities=21% Similarity=0.246 Sum_probs=86.3
Q ss_pred HHHHHHhhc--CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 146 VFGNLIDKV--RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 146 lL~~L~~~~--~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
+...+++.. ++++|||||||+|..+..+++. ++.+++++|+++.+.+.+++ ++.
T Consensus 32 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-----~~~~v~~~D~s~~~~~~a~~-------------------~~~ 87 (219)
T 3dlc_A 32 IAENIINRFGITAGTCIDIGSGPGALSIALAKQ-----SDFSIRALDFSKHMNEIALK-------------------NIA 87 (219)
T ss_dssp HHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHH-----SEEEEEEEESCHHHHHHHHH-------------------HHH
T ss_pred HHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHc-----CCCeEEEEECCHHHHHHHHH-------------------HHH
Confidence 334444433 3459999999999999999983 36799999999998887766 333
Q ss_pred hhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
..+..++ +.+..++..+ ++..+++||+|+.... |..+.....++.+.++|+|||++++.+...
T Consensus 88 ~~~~~~~---~~~~~~d~~~-~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 88 DANLNDR---IQIVQGDVHN-IPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp HTTCTTT---EEEEECBTTB-CSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred hccccCc---eEEEEcCHHH-CCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 3343334 7888888765 3333578999998754 334566789999999999999999987554
No 56
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.18 E-value=1.5e-10 Score=105.73 Aligned_cols=140 Identities=12% Similarity=0.039 Sum_probs=97.4
Q ss_pred chHHHHHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHH
Q 041517 141 GSYGAVFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFL 219 (327)
Q Consensus 141 ~~~g~lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl 219 (327)
+..+.+|..++... +..+|||+|||+|..++.+++. + ..+|+++|+++.+.+.+++
T Consensus 34 ~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~----~-~~~v~gvDi~~~~~~~a~~------------------ 90 (259)
T 3lpm_A 34 SIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTR----T-KAKIVGVEIQERLADMAKR------------------ 90 (259)
T ss_dssp CHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTT----C-CCEEEEECCSHHHHHHHHH------------------
T ss_pred cHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHh----c-CCcEEEEECCHHHHHHHHH------------------
Confidence 45566777777655 6789999999999999999873 3 3499999999999888776
Q ss_pred HHHhhhccCCcccceEeeecchhhhhhhc-CCcEeEEEEcCCCCC---------------------CcHHHHHHHHHccC
Q 041517 220 QNVIYQNAIDSVLPVPFSSGSALTKLCEW-GVVGDLIEIDAGHDF---------------------NSAWADINRAWRIL 277 (327)
Q Consensus 220 ~nv~~~g~~~~v~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~---------------------~~v~~dl~~~~~lL 277 (327)
|+...++.++ +.+..+|..+....+ .++||+|+.|...-. ......++.+.++|
T Consensus 91 -n~~~~~~~~~---v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~L 166 (259)
T 3lpm_A 91 -SVAYNQLEDQ---IEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLL 166 (259)
T ss_dssp -HHHHTTCTTT---EEEECSCGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHE
T ss_pred -HHHHCCCccc---EEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHc
Confidence 4444455555 888899988765434 579999999732100 11235688999999
Q ss_pred CCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeEE
Q 041517 278 RPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 278 ~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v~ 313 (327)
+|||++++- .. + ... ..+...+...++.+.
T Consensus 167 kpgG~l~~~--~~-~--~~~-~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 167 KQGGKANFV--HR-P--ERL-LDIIDIMRKYRLEPK 196 (259)
T ss_dssp EEEEEEEEE--EC-T--TTH-HHHHHHHHHTTEEEE
T ss_pred cCCcEEEEE--Ec-H--HHH-HHHHHHHHHCCCceE
Confidence 999998882 22 1 112 234444556666543
No 57
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.18 E-value=1.3e-10 Score=101.77 Aligned_cols=133 Identities=14% Similarity=0.044 Sum_probs=92.5
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..+ ...++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++..
T Consensus 44 ~~~~~-~~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~---------------------- 94 (227)
T 3e8s_A 44 ILLAI-LGRQPERVLDLGCGEGWLLRALADR------GIEAVGVDGDRTLVDAARAAG---------------------- 94 (227)
T ss_dssp HHHHH-HHTCCSEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHTC----------------------
T ss_pred HHHHh-hcCCCCEEEEeCCCCCHHHHHHHHC------CCEEEEEcCCHHHHHHHHHhc----------------------
Confidence 44444 3446799999999999999999873 679999999998887766521
Q ss_pred ccCCcccceEeeecchhhhh--h-hcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCC---------
Q 041517 226 NAIDSVLPVPFSSGSALTKL--C-EWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAAD--------- 293 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L--~-~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~--------- 293 (327)
. +.+..++..+.. + ..+.+||+|+.............++.+.++|+|||++++.+......
T Consensus 95 ----~---~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~ 167 (227)
T 3e8s_A 95 ----A---GEVHLASYAQLAEAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGW 167 (227)
T ss_dssp ----S---SCEEECCHHHHHTTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEE
T ss_pred ----c---cccchhhHHhhcccccccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecCccccCcccccccc
Confidence 1 344445544431 1 12356999998754335666789999999999999999987643110
Q ss_pred ----chh-------------HHHHHHHHHHHcCCeEEE
Q 041517 294 ----NRG-------------VRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 294 ----~~G-------------V~~Av~~f~~~~gl~v~~ 314 (327)
+.+ -.+.+..+++..|+++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 168 REESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp EEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred chhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 100 346677778889988763
No 58
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.17 E-value=1.1e-10 Score=101.56 Aligned_cols=134 Identities=16% Similarity=0.071 Sum_probs=96.2
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.++..+.... +.+|||||||+|..+..+++. +.+++++|+++.+.+.+++..
T Consensus 32 ~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~--------------------- 83 (203)
T 3h2b_A 32 VLIEPWATGV-DGVILDVGSGTGRWTGHLASL------GHQIEGLEPATRLVELARQTH--------------------- 83 (203)
T ss_dssp HHHHHHHHHC-CSCEEEETCTTCHHHHHHHHT------TCCEEEECCCHHHHHHHHHHC---------------------
T ss_pred HHHHHHhccC-CCeEEEecCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHhC---------------------
Confidence 4555555443 789999999999999999984 569999999998887665521
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCC-C--CcHHHHHHHHHccCCCCeEEEEEcCCCCCC--------
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHD-F--NSAWADINRAWRILRPGGVIFGHDYFTAAD-------- 293 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~-~--~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~-------- 293 (327)
.+ +.+..++..+ ++..+++||+|+...... . ......++.+.++|+|||++++.+......
T Consensus 84 ----~~---~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 155 (203)
T 3h2b_A 84 ----PS---VTFHHGTITD-LSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVA 155 (203)
T ss_dssp ----TT---SEEECCCGGG-GGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSS
T ss_pred ----CC---CeEEeCcccc-cccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhh
Confidence 01 6777777765 344458999999865422 2 256788999999999999999887654210
Q ss_pred --chhHHHHHHHHHHHcCCeEEE
Q 041517 294 --NRGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 294 --~~GV~~Av~~f~~~~gl~v~~ 314 (327)
..--.+.+..+++..|+++..
T Consensus 156 ~~~~~~~~~~~~~l~~~Gf~~~~ 178 (203)
T 3h2b_A 156 TAYRWPLPELAQALETAGFQVTS 178 (203)
T ss_dssp CEEECCHHHHHHHHHHTTEEEEE
T ss_pred hhccCCHHHHHHHHHHCCCcEEE
Confidence 001246677777888988653
No 59
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.17 E-value=1.2e-10 Score=102.35 Aligned_cols=144 Identities=14% Similarity=0.116 Sum_probs=101.4
Q ss_pred hHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 142 SYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 142 ~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
....++..+ ...+..+|||||||+|..+..+++. .++..+++++|+++.+.+.+++.
T Consensus 25 ~~~~~~~~~-~~~~~~~vLDiG~G~G~~~~~l~~~---~~~~~~v~~vD~s~~~~~~a~~~------------------- 81 (219)
T 3dh0_A 25 DPEKVLKEF-GLKEGMTVLDVGTGAGFYLPYLSKM---VGEKGKVYAIDVQEEMVNYAWEK------------------- 81 (219)
T ss_dssp CHHHHHHHH-TCCTTCEEEESSCTTCTTHHHHHHH---HTTTCEEEEEESCHHHHHHHHHH-------------------
T ss_pred CHHHHHHHh-CCCCCCEEEEEecCCCHHHHHHHHH---hCCCcEEEEEECCHHHHHHHHHH-------------------
Confidence 334455544 3445679999999999999999985 34678999999999988877663
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchh----
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRG---- 296 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~G---- 296 (327)
+...+.. + +.+..++..+. +..+++||+|+.... +........++.+.++|+|||++++.++.......+
T Consensus 82 ~~~~~~~-~---~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 156 (219)
T 3dh0_A 82 VNKLGLK-N---VEVLKSEENKI-PLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPE 156 (219)
T ss_dssp HHHHTCT-T---EEEEECBTTBC-SSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGG
T ss_pred HHHcCCC-c---EEEEecccccC-CCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchh
Confidence 2222321 2 77888876552 333578999998754 333456788999999999999999988765221111
Q ss_pred ---HHHHHHHHHHHcCCeEE
Q 041517 297 ---VRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 297 ---V~~Av~~f~~~~gl~v~ 313 (327)
-.+.+..+++..|+++.
T Consensus 157 ~~~~~~~~~~~l~~~Gf~~~ 176 (219)
T 3dh0_A 157 EVYSEWEVGLILEDAGIRVG 176 (219)
T ss_dssp GSCCHHHHHHHHHHTTCEEE
T ss_pred cccCHHHHHHHHHHCCCEEE
Confidence 24566777788898854
No 60
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.17 E-value=1.2e-10 Score=111.66 Aligned_cols=113 Identities=18% Similarity=0.135 Sum_probs=86.2
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc-CCccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA-IDSVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~-~~~v~ 232 (327)
.++++|||||||+|..+..+++. .+..+|++||+++.+.+.++++.. ... .++ ..+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~----~~~~~V~~VDis~~~l~~Ar~~~~----------------~~~-~gl~~~r-- 175 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARH----ASIEQIDMCEIDKMVVDVSKQFFP----------------DVA-IGYEDPR-- 175 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTC----TTCCEEEEEESCHHHHHHHHHHCH----------------HHH-GGGGSTT--
T ss_pred CCCCEEEEECCCccHHHHHHHHc----CCCCEEEEEECCHHHHHHHHHHHH----------------hhc-cccCCCc--
Confidence 36789999999999999999873 447899999999999998887532 110 122 123
Q ss_pred ceEeeecchhhhhhhc-CCcEeEEEEcCCCCCCc-----HHHHHHHHHccCCCCeEEEEE-cCCC
Q 041517 233 PVPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNS-----AWADINRAWRILRPGGVIFGH-DYFT 290 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~-----v~~dl~~~~~lL~pGGvIi~d-D~~~ 290 (327)
+++..+|+.+.++.. +++||+|++|....... ....++.+.++|+|||+++++ +..|
T Consensus 176 -v~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 176 -VNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp -EEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred -EEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 889999998877654 47899999997643211 247899999999999999997 5554
No 61
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.17 E-value=1.9e-10 Score=101.26 Aligned_cols=144 Identities=15% Similarity=0.133 Sum_probs=100.9
Q ss_pred HHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 144 GAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 144 g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
..++..+. ..++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++.. .
T Consensus 35 ~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~-------------------~ 88 (220)
T 3hnr_A 35 EDILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA------GRTVYGIEPSREMRMIAKEKL-------------------P 88 (220)
T ss_dssp HHHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT------TCEEEEECSCHHHHHHHHHHS-------------------C
T ss_pred HHHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC------CCeEEEEeCCHHHHHHHHHhC-------------------C
Confidence 34555553 336789999999999999999984 679999999998887765521 1
Q ss_pred hhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCC-CCcHHH--HHHHHHccCCCCeEEEEEcCCCCCCchh----
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHD-FNSAWA--DINRAWRILRPGGVIFGHDYFTAADNRG---- 296 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~-~~~v~~--dl~~~~~lL~pGGvIi~dD~~~~~~~~G---- 296 (327)
.+ +.+..++..+. +.. ++||+|+...... .+.... .++++.+.|+|||++++.+..... ...
T Consensus 89 -----~~---~~~~~~d~~~~-~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-~~~~~~~ 157 (220)
T 3hnr_A 89 -----KE---FSITEGDFLSF-EVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFAD-QDAYDKT 157 (220)
T ss_dssp -----TT---CCEESCCSSSC-CCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSS-HHHHHHH
T ss_pred -----Cc---eEEEeCChhhc-CCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccC-hHHHHHH
Confidence 11 66666766552 222 7899999875432 233333 799999999999999998865411 111
Q ss_pred ----------------------HHHHHHHHHHHcCCeEE---EccceEEEecc
Q 041517 297 ----------------------VRRAVNLFAKINGLKVQ---IDGQHWVIHSA 324 (327)
Q Consensus 297 ----------------------V~~Av~~f~~~~gl~v~---~~gq~w~i~~~ 324 (327)
-.+.+..+++..|+++. ..+..|+|..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~~~~w~~~~~ 210 (220)
T 3hnr_A 158 VEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLNHFVWVMEAT 210 (220)
T ss_dssp HHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECSSSEEEEEEE
T ss_pred HHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeeccceEEEEeeh
Confidence 12456677888898755 46888998754
No 62
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.16 E-value=2.4e-10 Score=109.31 Aligned_cols=131 Identities=15% Similarity=0.185 Sum_probs=94.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCC-cccc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAID-SVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~-~v~~ 233 (327)
++.+|||+|||+|..++.+|+. +.+|++||.++.+.+.+++ |+...++.+ +
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~------ga~V~~VD~s~~al~~a~~-------------------n~~~~gl~~~~--- 204 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA------GAEVTHVDASKKAIGWAKE-------------------NQVLAGLEQAP--- 204 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT------TCEEEEECSCHHHHHHHHH-------------------HHHHHTCTTSC---
T ss_pred CCCcEEEcccccCHHHHHHHHc------CCEEEEEECCHHHHHHHHH-------------------HHHHcCCCccc---
Confidence 4579999999999999999983 4499999999999988876 444344433 3
Q ss_pred eEeeecchhhhhhhc---CCcEeEEEEcCCC-C----------CCcHHHHHHHHHccCCCCeEEEEEcCCC-CCCchhHH
Q 041517 234 VPFSSGSALTKLCEW---GVVGDLIEIDAGH-D----------FNSAWADINRAWRILRPGGVIFGHDYFT-AADNRGVR 298 (327)
Q Consensus 234 V~~~~gda~~~L~~l---~~~fDLIfIDa~h-~----------~~~v~~dl~~~~~lL~pGGvIi~dD~~~-~~~~~GV~ 298 (327)
+++..+|+.+.++.+ +.+||+|++|... . .......++.+.++|+|||++++..... ........
T Consensus 205 v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~ 284 (332)
T 2igt_A 205 IRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMH 284 (332)
T ss_dssp EEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHH
T ss_pred eEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHH
Confidence 788899988876543 5789999998541 0 0123456788899999999966655443 22333466
Q ss_pred HHHHHHHHHcCCeEE
Q 041517 299 RAVNLFAKINGLKVQ 313 (327)
Q Consensus 299 ~Av~~f~~~~gl~v~ 313 (327)
+.+.+.+...|.++.
T Consensus 285 ~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 285 ELMRETMRGAGGVVA 299 (332)
T ss_dssp HHHHHHTTTSCSEEE
T ss_pred HHHHHHHHHcCCeEE
Confidence 777777777787775
No 63
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.16 E-value=1.9e-10 Score=109.36 Aligned_cols=127 Identities=13% Similarity=0.036 Sum_probs=90.7
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc-CCccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA-IDSVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~-~~~v~ 232 (327)
..+++|||||||+|..+..+++ ..+..+|+++|+++.+.+.++++.. .+ ..+. ..+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~----~~~~~~v~~vDis~~~l~~ar~~~~----------------~~-~~~~~~~~-- 171 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCK----YKSVENIDICEIDETVIEVSKIYFK----------------NI-SCGYEDKR-- 171 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTT----CTTCCEEEEEESCHHHHHHHHHHCT----------------TT-SGGGGSTT--
T ss_pred CCCCEEEEEcCCccHHHHHHHH----cCCCCEEEEEECCHHHHHHHHHHHH----------------hh-ccccCCCc--
Confidence 4678999999999999999886 3447899999999999998887542 10 0111 123
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcH-----HHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHH
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSA-----WADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLF 304 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v-----~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f 304 (327)
+++..+|+.+.++..+++||+|++|......+. ...++.+.+.|+|||++++...........+++.++.+
T Consensus 172 -v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 247 (321)
T 2pt6_A 172 -VNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYA 247 (321)
T ss_dssp -EEEEESCHHHHHHHCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHH
T ss_pred -EEEEEccHHHHHhhcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHH
Confidence 889999998877665678999999975332211 57789999999999999997543211222344444444
No 64
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.16 E-value=1.7e-10 Score=105.56 Aligned_cols=128 Identities=18% Similarity=0.105 Sum_probs=87.4
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||+|||+|+++..+|+. ++++|+|+++|+++.|.+.+++... .. .. +.
T Consensus 78 G~~VldlG~G~G~~~~~la~~---VG~~G~V~avD~s~~~~~~l~~~a~-------------------~~---~n---i~ 129 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDI---IGPRGRIYGVEFAPRVMRDLLTVVR-------------------DR---RN---IF 129 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHH---HCTTCEEEEEECCHHHHHHHHHHST-------------------TC---TT---EE
T ss_pred CCEEEEecCcCCHHHHHHHHH---hCCCceEEEEeCCHHHHHHHHHhhH-------------------hh---cC---ee
Confidence 579999999999999999996 6889999999999988876654221 11 12 44
Q ss_pred eeecchhh--hhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCC----chh-HHHHHHHHHHHc
Q 041517 236 FSSGSALT--KLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAAD----NRG-VRRAVNLFAKIN 308 (327)
Q Consensus 236 ~~~gda~~--~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~----~~G-V~~Av~~f~~~~ 308 (327)
...++..+ ..+.....+|+||.|-.+.. .....+.++.+.|||||.+++.+-....+ .+. ..+.++.+ ...
T Consensus 130 ~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~-~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L-~~~ 207 (233)
T 4df3_A 130 PILGDARFPEKYRHLVEGVDGLYADVAQPE-QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTL-MDG 207 (233)
T ss_dssp EEESCTTCGGGGTTTCCCEEEEEECCCCTT-HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHH-HHT
T ss_pred EEEEeccCccccccccceEEEEEEeccCCh-hHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHH-HHC
Confidence 44444332 23344578999999987753 44567899999999999988754433111 112 33444443 556
Q ss_pred CCeEE
Q 041517 309 GLKVQ 313 (327)
Q Consensus 309 gl~v~ 313 (327)
|+++.
T Consensus 208 GF~l~ 212 (233)
T 4df3_A 208 GLEIK 212 (233)
T ss_dssp TCCEE
T ss_pred CCEEE
Confidence 77653
No 65
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.15 E-value=4.1e-10 Score=100.05 Aligned_cols=127 Identities=13% Similarity=0.031 Sum_probs=89.1
Q ss_pred CCCEEEEEcCc-chHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSF-LGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~-~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
+..+|||+||| +|..++.+++.. +.+|+++|+++.+.+.+++ |+...+. .
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~-----~~~v~~vD~s~~~~~~a~~-------------------~~~~~~~-----~ 105 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF-----NCKVTATEVDEEFFEYARR-------------------NIERNNS-----N 105 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH-----CCEEEEEECCHHHHHHHHH-------------------HHHHTTC-----C
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc-----CCEEEEEECCHHHHHHHHH-------------------HHHHhCC-----C
Confidence 46899999999 999999999852 6899999999999888876 3333333 2
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCC--------------------CCCcHHHHHHHHHccCCCCeEEEEEcCCCCCC
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGH--------------------DFNSAWADINRAWRILRPGGVIFGHDYFTAAD 293 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h--------------------~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~ 293 (327)
+.+..+++.......+++||+|+.+... ........++.+.++|+|||++++--..
T Consensus 106 v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---- 181 (230)
T 3evz_A 106 VRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD---- 181 (230)
T ss_dssp CEEEECSSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES----
T ss_pred cEEEeCCchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc----
Confidence 7778887532212224789999987321 1111356789999999999998874222
Q ss_pred chhHHHHHHHHHHHcCCeEEE
Q 041517 294 NRGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 294 ~~GV~~Av~~f~~~~gl~v~~ 314 (327)
.+.-.+.+...+...|+++..
T Consensus 182 ~~~~~~~~~~~l~~~g~~~~~ 202 (230)
T 3evz_A 182 KEKLLNVIKERGIKLGYSVKD 202 (230)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred cHhHHHHHHHHHHHcCCceEE
Confidence 123345566667778887654
No 66
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.15 E-value=1.3e-10 Score=105.40 Aligned_cols=109 Identities=16% Similarity=0.153 Sum_probs=81.5
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
...++.+|||||||+|..+..+++. ..+|+++|+++.+.+.+++. +...+.. +
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~-------------------~~~~~~~-~- 86 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPF------VKKVVAFDLTEDILKVARAF-------------------IEGNGHQ-Q- 86 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGG------SSEEEEEESCHHHHHHHHHH-------------------HHHTTCC-S-
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHh------CCEEEEEeCCHHHHHHHHHH-------------------HHhcCCC-c-
Confidence 3446789999999999999998874 35999999999998877652 2222221 2
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcC-CCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDA-GHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+.+..++..+ ++..+++||+|+... .|..+.....++++.+.|+|||++++.+...
T Consensus 87 --v~~~~~d~~~-l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 87 --VEYVQGDAEQ-MPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp --EEEEECCC-C-CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred --eEEEEecHHh-CCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 7788887655 343357899999874 4445666789999999999999999876554
No 67
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.15 E-value=1.8e-10 Score=105.21 Aligned_cols=133 Identities=13% Similarity=0.030 Sum_probs=102.2
Q ss_pred HHHHHhhcCC-CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 147 FGNLIDKVRP-RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 147 L~~L~~~~~p-~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
|+.+.+..++ .+|+|||||+|+.++.+|. .++..+|+++|+++++.+.|++ |+...
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~----~~~~~~V~AvDi~~~al~~A~~-------------------N~~~~ 68 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQ----MGYCDFAIAGEVVNGPYQSALK-------------------NVSEH 68 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHH----TTCEEEEEEEESSHHHHHHHHH-------------------HHHHT
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHH----hCCCCEEEEEECCHHHHHHHHH-------------------HHHHc
Confidence 4555566654 5899999999999999998 3557799999999999998876 66666
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHH
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFA 305 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~ 305 (327)
|+.++ |.+..+|..+.+.. +.+||+|+|-+.- .+-...-++.+.+.|+++|.+|+.-... ...+..+.
T Consensus 69 gl~~~---I~~~~gD~l~~~~~-~~~~D~IviaGmG-g~lI~~IL~~~~~~l~~~~~lIlqp~~~-------~~~lr~~L 136 (230)
T 3lec_A 69 GLTSK---IDVRLANGLSAFEE-ADNIDTITICGMG-GRLIADILNNDIDKLQHVKTLVLQPNNR-------EDDLRKWL 136 (230)
T ss_dssp TCTTT---EEEEECSGGGGCCG-GGCCCEEEEEEEC-HHHHHHHHHHTGGGGTTCCEEEEEESSC-------HHHHHHHH
T ss_pred CCCCc---EEEEECchhhcccc-ccccCEEEEeCCc-hHHHHHHHHHHHHHhCcCCEEEEECCCC-------hHHHHHHH
Confidence 77666 89999998886542 2379999986543 2335566888899999999999866432 56777788
Q ss_pred HHcCCeEEE
Q 041517 306 KINGLKVQI 314 (327)
Q Consensus 306 ~~~gl~v~~ 314 (327)
.++|+.+..
T Consensus 137 ~~~Gf~i~~ 145 (230)
T 3lec_A 137 AANDFEIVA 145 (230)
T ss_dssp HHTTEEEEE
T ss_pred HHCCCEEEE
Confidence 888987653
No 68
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.15 E-value=1.5e-10 Score=106.03 Aligned_cols=125 Identities=11% Similarity=0.021 Sum_probs=89.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..++.+|.. .++.+|++||.++.+.+.+++ |+...++. . |
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~----~~~~~v~~vD~s~~~~~~a~~-------------------~~~~~~l~-~---v 132 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIV----RPELELVLVDATRKKVAFVER-------------------AIEVLGLK-G---A 132 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHH----CTTCEEEEEESCHHHHHHHHH-------------------HHHHHTCS-S---E
T ss_pred CCCEEEEEcCCCCHHHHHHHHH----CCCCEEEEEECCHHHHHHHHH-------------------HHHHhCCC-c---e
Confidence 4679999999999999999985 357899999999999988876 44434442 2 8
Q ss_pred Eeeecchhhhhh--hcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 235 PFSSGSALTKLC--EWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 235 ~~~~gda~~~L~--~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
.+..+++.+... ...++||+|+..+-. +....++.+.++|+|||++++-...+ . ...+. .+...+...|+.+
T Consensus 133 ~~~~~d~~~~~~~~~~~~~fD~I~s~a~~---~~~~ll~~~~~~LkpgG~l~~~~g~~-~-~~e~~-~~~~~l~~~G~~~ 206 (249)
T 3g89_A 133 RALWGRAEVLAREAGHREAYARAVARAVA---PLCVLSELLLPFLEVGGAAVAMKGPR-V-EEELA-PLPPALERLGGRL 206 (249)
T ss_dssp EEEECCHHHHTTSTTTTTCEEEEEEESSC---CHHHHHHHHGGGEEEEEEEEEEECSC-C-HHHHT-THHHHHHHHTEEE
T ss_pred EEEECcHHHhhcccccCCCceEEEECCcC---CHHHHHHHHHHHcCCCeEEEEEeCCC-c-HHHHH-HHHHHHHHcCCeE
Confidence 888998877533 234789999998754 33467899999999999888755433 1 12232 3333344556554
No 69
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.15 E-value=2e-10 Score=103.22 Aligned_cols=110 Identities=17% Similarity=0.228 Sum_probs=82.9
Q ss_pred HhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCc
Q 041517 151 IDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDS 230 (327)
Q Consensus 151 ~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~ 230 (327)
++..+..+|||||||+|..+..+++. ..+++++|+++.+.+.+++. +...+.. +
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~-------------------~~~~~~~-~ 70 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPY------VQECIGVDATKEMVEVASSF-------------------AQEKGVE-N 70 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHH-------------------HHHHTCC-S
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHh------CCEEEEEECCHHHHHHHHHH-------------------HHHcCCC-C
Confidence 34456789999999999999998874 35999999999988877652 2222221 2
Q ss_pred ccceEeeecchhhhhhhcCCcEeEEEEcC-CCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 231 VLPVPFSSGSALTKLCEWGVVGDLIEIDA-GHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+.+..++..+ ++..+++||+|+... .|........++++.++|+|||++++.+...
T Consensus 71 ---v~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 71 ---VRFQQGTAES-LPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp ---EEEEECBTTB-CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ---eEEEeccccc-CCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 7777887655 444357899999874 4445667788999999999999999877654
No 70
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.14 E-value=8.4e-10 Score=93.44 Aligned_cols=122 Identities=15% Similarity=0.079 Sum_probs=89.3
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
...+..+|||+|||+|..+..+++ +..+++++|.++.+.+.+++ |+...+. .+
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~------~~~~v~~vD~~~~~~~~a~~-------------------~~~~~~~-~~- 84 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAK------RCKFVYAIDYLDGAIEVTKQ-------------------NLAKFNI-KN- 84 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHT------TSSEEEEEECSHHHHHHHHH-------------------HHHHTTC-CS-
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHh------cCCeEEEEeCCHHHHHHHHH-------------------HHHHcCC-Cc-
Confidence 334567999999999999999886 37899999999998887765 3333333 22
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCe
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLK 311 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~ 311 (327)
+.+..++..+.++. ++||+|+++.. ......++.+.++ |||++++.+... ....+ +.+.+++.|++
T Consensus 85 --~~~~~~d~~~~~~~--~~~D~i~~~~~---~~~~~~l~~~~~~--~gG~l~~~~~~~----~~~~~-~~~~l~~~g~~ 150 (183)
T 2yxd_A 85 --CQIIKGRAEDVLDK--LEFNKAFIGGT---KNIEKIIEILDKK--KINHIVANTIVL----ENAAK-IINEFESRGYN 150 (183)
T ss_dssp --EEEEESCHHHHGGG--CCCSEEEECSC---SCHHHHHHHHHHT--TCCEEEEEESCH----HHHHH-HHHHHHHTTCE
T ss_pred --EEEEECCccccccC--CCCcEEEECCc---ccHHHHHHHHhhC--CCCEEEEEeccc----ccHHH-HHHHHHHcCCe
Confidence 78888888775543 68999999877 4455778888887 999999988654 33444 44455667777
Q ss_pred EEE
Q 041517 312 VQI 314 (327)
Q Consensus 312 v~~ 314 (327)
+..
T Consensus 151 ~~~ 153 (183)
T 2yxd_A 151 VDA 153 (183)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 71
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.14 E-value=5.5e-10 Score=109.27 Aligned_cols=136 Identities=17% Similarity=0.118 Sum_probs=98.9
Q ss_pred HHhhcC-CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccC
Q 041517 150 LIDKVR-PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI 228 (327)
Q Consensus 150 L~~~~~-p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~ 228 (327)
+.+..+ ..+|||+|||+|..++.+|+. +.+|+++|.++.+.+.+++ |+...+..
T Consensus 208 l~~~~~~g~~VLDlg~GtG~~sl~~a~~------ga~V~avDis~~al~~a~~-------------------n~~~ng~~ 262 (393)
T 4dmg_A 208 FEAMVRPGERVLDVYSYVGGFALRAARK------GAYALAVDKDLEALGVLDQ-------------------AALRLGLR 262 (393)
T ss_dssp HHTTCCTTCEEEEESCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHH-------------------HHHHHTCC
T ss_pred HHHHhcCCCeEEEcccchhHHHHHHHHc------CCeEEEEECCHHHHHHHHH-------------------HHHHhCCC
Confidence 334455 679999999999999999984 4569999999999988876 44444543
Q ss_pred CcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC----------CcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHH
Q 041517 229 DSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF----------NSAWADINRAWRILRPGGVIFGHDYFTAADNRGVR 298 (327)
Q Consensus 229 ~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~----------~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~ 298 (327)
. ++..+|+.+.++.+.+.||+|++|...-. ......++.+.++|+|||++++..+..........
T Consensus 263 ~-----~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~ 337 (393)
T 4dmg_A 263 V-----DIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLL 337 (393)
T ss_dssp C-----EEEESCHHHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHH
T ss_pred C-----cEEEccHHHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHH
Confidence 2 34488888877665555999999964300 11235677889999999999987777644444566
Q ss_pred HHHHHHHHHcCCeEEEc
Q 041517 299 RAVNLFAKINGLKVQID 315 (327)
Q Consensus 299 ~Av~~f~~~~gl~v~~~ 315 (327)
+.+...+...|.+++..
T Consensus 338 ~~v~~a~~~~g~~~~i~ 354 (393)
T 4dmg_A 338 EVARRAAADLGRRLRVH 354 (393)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhCCeEEEE
Confidence 77777777777766543
No 72
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.14 E-value=1.2e-10 Score=110.20 Aligned_cols=110 Identities=16% Similarity=0.045 Sum_probs=85.3
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhc-c-CCcc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQN-A-IDSV 231 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g-~-~~~v 231 (327)
..+++|||||||+|..+..+++. .+..+|++||+++.+.+.++++.. .+. .+ + ..+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~----~~~~~v~~vDid~~~i~~ar~~~~----------------~~~-~~~~~~~~- 133 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKH----PTVEKAVMVDIDGELVEVAKRHMP----------------EWH-QGAFDDPR- 133 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS----TTCCEEEEEESCHHHHHHHHHHCH----------------HHH-TTGGGCTT-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhc----CCCCEEEEEECCHHHHHHHHHHhH----------------hhc-cccccCCc-
Confidence 46789999999999999998873 447899999999999998877432 110 11 1 123
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCCCCC---Cc-----HHHHHHHHHccCCCCeEEEEEc
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF---NS-----AWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~---~~-----v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+++..+|+.+.++..+++||+|++|..... .+ ....++.+.++|+|||++++.-
T Consensus 134 --v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 134 --AVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp --EEEEESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred --eEEEEchHHHHHHhcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 888999998877666789999999986543 21 3578999999999999999864
No 73
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.14 E-value=2.1e-10 Score=107.72 Aligned_cols=130 Identities=11% Similarity=-0.008 Sum_probs=90.0
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc-CCccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA-IDSVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~-~~~v~ 232 (327)
..+++|||||||+|..+..+++. .+..+|++||+++.+.+.++++.. .+. .+. ..+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~----~~~~~v~~vDid~~~~~~a~~~~~----------------~~~-~~~~~~~-- 145 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKH----DSVEKAILCEVDGLVIEAARKYLK----------------QTS-CGFDDPR-- 145 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTS----TTCSEEEEEESCHHHHHHHHHHCH----------------HHH-GGGGCTT--
T ss_pred CCCCEEEEEcCCcCHHHHHHHhc----CCCCEEEEEECCHHHHHHHHHHhH----------------hhc-cccCCCc--
Confidence 35789999999999999998873 346899999999999998887532 110 111 123
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCC-CC-----cHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHH
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHD-FN-----SAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAK 306 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~-~~-----~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~ 306 (327)
+++..+|+.+.++..+++||+|++|.... .. .....++.+.++|+|||++++.-.............++.+.+
T Consensus 146 -v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 224 (296)
T 1inl_A 146 -AEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISK 224 (296)
T ss_dssp -EEEEESCHHHHGGGCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHH
T ss_pred -eEEEECcHHHHHhhCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHH
Confidence 88999999887766567899999997543 11 124778999999999999999754321112234444555544
Q ss_pred H
Q 041517 307 I 307 (327)
Q Consensus 307 ~ 307 (327)
.
T Consensus 225 ~ 225 (296)
T 1inl_A 225 V 225 (296)
T ss_dssp H
T ss_pred H
Confidence 4
No 74
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.13 E-value=1.1e-10 Score=107.55 Aligned_cols=120 Identities=12% Similarity=0.018 Sum_probs=83.6
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.++..++...++.+|||||||+|..+..+++. +.+|+++|+++.+.+.+++... .
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~-------------------~ 101 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE------GFSVTSVDASDKMLKYALKERW-------------------N 101 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHH-------------------H
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHhhh-------------------h
Confidence 34555555557789999999999999999984 5599999999999988866321 0
Q ss_pred hccCCcccceEeeecchhhhhh--hcCCcEeEEEEc--CCCCCCc-------HHHHHHHHHccCCCCeEEEEEcCC
Q 041517 225 QNAIDSVLPVPFSSGSALTKLC--EWGVVGDLIEID--AGHDFNS-------AWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~--~l~~~fDLIfID--a~h~~~~-------v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
.+.......+.+..++..+.-. ..+++||+|++- .-+.... ....++.+.++|+|||++++....
T Consensus 102 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 102 RRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp TTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 0000001126666777655321 235789999985 3333334 677899999999999999987554
No 75
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.13 E-value=4.6e-10 Score=107.00 Aligned_cols=125 Identities=15% Similarity=0.077 Sum_probs=92.5
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|||||||.|..+..+++. . ++.+|++||+++.+.+.+++++.. . ...+ +++
T Consensus 91 ~rVLdIG~G~G~la~~la~~---~-p~~~v~~VEidp~vi~~Ar~~~~~-------------------~-~~~r---v~v 143 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADV---Y-PQSRNTVVELDAELARLSREWFDI-------------------P-RAPR---VKI 143 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHH---S-TTCEEEEEESCHHHHHHHHHHSCC-------------------C-CTTT---EEE
T ss_pred CEEEEEECCcCHHHHHHHHH---C-CCcEEEEEECCHHHHHHHHHhccc-------------------c-CCCc---eEE
Confidence 49999999999999999984 2 467999999999999998875421 0 1123 889
Q ss_pred eecchhhhhhhc-CCcEeEEEEcCCCCCC-c----HHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcC
Q 041517 237 SSGSALTKLCEW-GVVGDLIEIDAGHDFN-S----AWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKING 309 (327)
Q Consensus 237 ~~gda~~~L~~l-~~~fDLIfIDa~h~~~-~----v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~g 309 (327)
..+|+.+.+... +++||+|++|...... + ..+.++.+.++|+|||++++.-... ......+..+..+.+..+
T Consensus 144 ~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~-~~~~~~~~~~~tL~~vF~ 221 (317)
T 3gjy_A 144 RVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH-SDLRGAKSELAGMMEVFE 221 (317)
T ss_dssp EESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC-TTCHHHHHHHHHHHHHCS
T ss_pred EECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC-cchHHHHHHHHHHHHHCC
Confidence 999999887655 4789999999754321 1 2578999999999999999877643 333445555555555443
No 76
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.13 E-value=8.3e-11 Score=105.59 Aligned_cols=115 Identities=18% Similarity=0.024 Sum_probs=81.1
Q ss_pred HHHHHHhh--cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 146 VFGNLIDK--VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 146 lL~~L~~~--~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
++..+... .+..+|||||||+|..+..+++. + ..+|+++|+++.+.+.+++.. .
T Consensus 49 ~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~----~-~~~v~gvD~s~~~l~~a~~~~-------------------~ 104 (236)
T 1zx0_A 49 YMHALAAAASSKGGRVLEVGFGMAIAASKVQEA----P-IDEHWIIECNDGVFQRLRDWA-------------------P 104 (236)
T ss_dssp HHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTS----C-EEEEEEEECCHHHHHHHHHHG-------------------G
T ss_pred HHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhc----C-CCeEEEEcCCHHHHHHHHHHH-------------------H
Confidence 44444443 24579999999999999999762 2 348999999999998887632 1
Q ss_pred hhccCCcccceEeeecchhhhhhhc-CCcEeEEEEcCCCCC-Cc-----HHHHHHHHHccCCCCeEEEEEcCC
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEW-GVVGDLIEIDAGHDF-NS-----AWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~-~~-----v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
..+ .+ +.+..++..+.+..+ +++||+|+.|..... .. ....++++.++|||||++++.++.
T Consensus 105 ~~~--~~---v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 105 RQT--HK---VIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp GCS--SE---EEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred hcC--CC---eEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 112 12 888899988754333 478999999643211 11 113488999999999999987754
No 77
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.13 E-value=1.3e-10 Score=103.87 Aligned_cols=129 Identities=13% Similarity=-0.020 Sum_probs=92.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++++|||||||+|..+..+++ .+.+|+++|+++.+.+.+++.. ...+...+ +
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~------~~~~v~gvD~s~~~~~~a~~~~-------------------~~~~~~~~---v 117 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS------PERFVVGLDISESALAKANETY-------------------GSSPKAEY---F 117 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB------TTEEEEEECSCHHHHHHHHHHH-------------------TTSGGGGG---E
T ss_pred CCCCEEEeCCCCCHHHHHHHh------CCCeEEEEECCHHHHHHHHHHh-------------------hccCCCcc---e
Confidence 467999999999999998875 2789999999999888776632 21122222 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC-CCCC--cHHHHHHHHHccCCCCeEEEEEcCCCCCC-----chhHHHHHHHHHH
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG-HDFN--SAWADINRAWRILRPGGVIFGHDYFTAAD-----NRGVRRAVNLFAK 306 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~--~v~~dl~~~~~lL~pGGvIi~dD~~~~~~-----~~GV~~Av~~f~~ 306 (327)
.+..++..+.. .+.+||+|+.-.. +..+ .....++.+.++|+|||++++.++..... +.--.+.+..++.
T Consensus 118 ~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 195 (235)
T 3lcc_A 118 SFVKEDVFTWR--PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLV 195 (235)
T ss_dssp EEECCCTTTCC--CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHG
T ss_pred EEEECchhcCC--CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHH
Confidence 88888877632 2468999997544 3223 56678999999999999999887754211 1113466777778
Q ss_pred HcCCeEE
Q 041517 307 INGLKVQ 313 (327)
Q Consensus 307 ~~gl~v~ 313 (327)
..|+++.
T Consensus 196 ~~Gf~~~ 202 (235)
T 3lcc_A 196 PIGFKAV 202 (235)
T ss_dssp GGTEEEE
T ss_pred HcCCeEE
Confidence 8888764
No 78
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.13 E-value=2.6e-10 Score=113.67 Aligned_cols=142 Identities=9% Similarity=0.069 Sum_probs=103.8
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.++..++...+..+|||+|||.|..|+.+|+. ++..++|+++|+++.+.+.+++ |+..
T Consensus 95 ~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~---~~~~g~V~AvDis~~rl~~~~~-------------------n~~r 152 (456)
T 3m4x_A 95 MIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQ---MKGKGLLVTNEIFPKRAKILSE-------------------NIER 152 (456)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHH---HTTCSEEEEECSSHHHHHHHHH-------------------HHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHH---cCCCCEEEEEeCCHHHHHHHHH-------------------HHHH
Confidence 35555555556789999999999999999986 4556899999999988877765 5555
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcH-----------------------HHHHHHHHccCCCCe
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSA-----------------------WADINRAWRILRPGG 281 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v-----------------------~~dl~~~~~lL~pGG 281 (327)
.|.. . |.+..+|+.+....++++||+|++|+..+...+ ...++.++++|+|||
T Consensus 153 ~g~~-n---v~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG 228 (456)
T 3m4x_A 153 WGVS-N---AIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKG 228 (456)
T ss_dssp HTCS-S---EEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred cCCC-c---eEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5553 2 778888887754445689999999975321111 156889999999999
Q ss_pred EEEEEcCCCCCCchhHHHHHHHHHHHcCCeEEE
Q 041517 282 VIFGHDYFTAADNRGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 282 vIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v~~ 314 (327)
+|+...+...+ ..=.+-|..|.+++++++.+
T Consensus 229 ~LvYsTCs~~~--eEne~vv~~~l~~~~~~l~~ 259 (456)
T 3m4x_A 229 QLIYSTCTFAP--EENEEIISWLVENYPVTIEE 259 (456)
T ss_dssp EEEEEESCCCG--GGTHHHHHHHHHHSSEEEEC
T ss_pred EEEEEEeeccc--ccCHHHHHHHHHhCCCEEEe
Confidence 99998886632 22345567777777766654
No 79
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.13 E-value=2.7e-10 Score=106.11 Aligned_cols=117 Identities=10% Similarity=0.116 Sum_probs=83.6
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+++|||||||+|..+..+++ . +..+|++||+++.+.+.++++.. ...+ +.+....+...+
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~----~-~~~~v~~vDid~~~i~~ar~~~~--~~~~--------l~~~~~~~~~~~-- 135 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQ----H-DVDEVIMVEIDEDVIMVSKDLIK--IDNG--------LLEAMLNGKHEK-- 135 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTT----S-CCSEEEEEESCHHHHHHHHHHTC--TTTT--------HHHHHHTTCCSS--
T ss_pred CCCCCeEEEEcCCcCHHHHHHHh----C-CCCEEEEEECCHHHHHHHHHHHh--hccc--------cccccccCCCCc--
Confidence 34678999999999999999887 3 46899999999999998887431 0000 000000001223
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCc-----HHHHHHHHHccCCCCeEEEEEcC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNS-----AWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~-----v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+++..+|+.+.+.. +++||+|++|......+ ....++.+.++|+|||++++...
T Consensus 136 -v~~~~~D~~~~l~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 136 -AKLTIGDGFEFIKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp -EEEEESCHHHHHHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -EEEEECchHHHhcc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 88899999887766 78899999998642211 24678999999999999999743
No 80
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.12 E-value=4.2e-10 Score=105.99 Aligned_cols=134 Identities=15% Similarity=0.088 Sum_probs=91.5
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.++++|||||||.|..+..+++ ..+..+|++||+++.+.+.++++.. .+.......+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~----~~~~~~v~~vDid~~~i~~a~~~~~----------------~~~~~~~~~~--- 150 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLR----HGTVEHCDLVDIDGEVMEQSKQHFP----------------QISRSLADPR--- 150 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHT----CTTCCEEEEEESCHHHHHHHHHHCH----------------HHHGGGGCTT---
T ss_pred CCCCeEEEEcCCCCHHHHHHHh----CCCCCEEEEEECCHHHHHHHHHHhH----------------HhhcccCCCc---
Confidence 3578999999999999999987 3456899999999999988877431 1111111223
Q ss_pred eEeeecchhhhhhh-cCCcEeEEEEcCCCCCCcH-----HHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHH
Q 041517 234 VPFSSGSALTKLCE-WGVVGDLIEIDAGHDFNSA-----WADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKI 307 (327)
Q Consensus 234 V~~~~gda~~~L~~-l~~~fDLIfIDa~h~~~~v-----~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~ 307 (327)
+++..+|+.+.+.. .+++||+|++|......+. ...++.+.+.|+|||++++....... .....+.+...++.
T Consensus 151 v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~-~~~~~~~~~~~l~~ 229 (304)
T 3bwc_A 151 ATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL-DLELIEKMSRFIRE 229 (304)
T ss_dssp EEEEESCHHHHHHSSCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT-CHHHHHHHHHHHHH
T ss_pred EEEEECcHHHHHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc-chHHHHHHHHHHHh
Confidence 88889998886654 3578999999976433211 47789999999999999987443211 12233445555566
Q ss_pred cCCe
Q 041517 308 NGLK 311 (327)
Q Consensus 308 ~gl~ 311 (327)
.|+.
T Consensus 230 ~GF~ 233 (304)
T 3bwc_A 230 TGFA 233 (304)
T ss_dssp HTCS
T ss_pred CCCC
Confidence 6664
No 81
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.12 E-value=3e-10 Score=105.61 Aligned_cols=115 Identities=10% Similarity=0.002 Sum_probs=86.6
Q ss_pred HHHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 145 AVFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 145 ~lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
..+..+++.. +..+|||||||+|..+..+++. . +.+|+++|+++.+.+.+++ +
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~---~--~~~v~gvD~s~~~~~~a~~-------------------~ 114 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAE---Y--DVNVIGLTLSENQYAHDKA-------------------M 114 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHH---H--CCEEEEEECCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHh---C--CCEEEEEECCHHHHHHHHH-------------------H
Confidence 3455555543 3469999999999999999985 2 3789999999999888766 3
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCC-CC---------CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGH-DF---------NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h-~~---------~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+...++.++ +.+..++..+. +++||+|+..... .. ......++.+.++|+|||++++.++..
T Consensus 115 ~~~~~~~~~---v~~~~~d~~~~----~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 115 FDEVDSPRR---KEVRIQGWEEF----DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp HHHSCCSSC---EEEEECCGGGC----CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred HHhcCCCCc---eEEEECCHHHc----CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 333454444 88888887653 6899999986432 11 223578999999999999999999865
No 82
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.12 E-value=9.3e-10 Score=107.05 Aligned_cols=131 Identities=12% Similarity=0.042 Sum_probs=96.5
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCC-ccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAID-SVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~-~v~ 232 (327)
.+..+|||+|||+|..++.+|+. + ..+|+++|.++.+.+.|++ |+...++.+ +
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~----g-a~~V~~vD~s~~al~~A~~-------------------N~~~n~~~~~~-- 264 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG----G-AMATTSVDLAKRSRALSLA-------------------HFEANHLDMAN-- 264 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT----T-BSEEEEEESCTTHHHHHHH-------------------HHHHTTCCCTT--
T ss_pred cCCCeEEEEeeccCHHHHHHHHC----C-CCEEEEEECCHHHHHHHHH-------------------HHHHcCCCccc--
Confidence 45689999999999999999973 1 3589999999999998877 444445433 3
Q ss_pred ceEeeecchhhhhhhc---CCcEeEEEEcCCC------CCCcHHHH----HHHHHccCCCCeEEEEEcCCCCCCchhHHH
Q 041517 233 PVPFSSGSALTKLCEW---GVVGDLIEIDAGH------DFNSAWAD----INRAWRILRPGGVIFGHDYFTAADNRGVRR 299 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l---~~~fDLIfIDa~h------~~~~v~~d----l~~~~~lL~pGGvIi~dD~~~~~~~~GV~~ 299 (327)
+++..+|+.+.++.+ +.+||+|++|... .......+ ++.+.++|+|||++++.............+
T Consensus 265 -v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 343 (385)
T 2b78_A 265 -HQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKK 343 (385)
T ss_dssp -EEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHH
T ss_pred -eEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHH
Confidence 889999998877654 4689999999432 12233333 456689999999999887765433344666
Q ss_pred HHHHHHHHcCCe
Q 041517 300 AVNLFAKINGLK 311 (327)
Q Consensus 300 Av~~f~~~~gl~ 311 (327)
.+.+.+...|.+
T Consensus 344 ~i~~~~~~~g~~ 355 (385)
T 2b78_A 344 QIEKGFGKQKHT 355 (385)
T ss_dssp HHHHHHTTCCCE
T ss_pred HHHHHHHHcCCc
Confidence 777777777766
No 83
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.12 E-value=2e-10 Score=107.49 Aligned_cols=107 Identities=11% Similarity=-0.044 Sum_probs=82.9
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||||||+|..+..+++.. +.+|+++|+++.+.+.+++ ++...++.++ +.
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~-------------------~~~~~~~~~~---v~ 170 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRF-----GSRVEGVTLSAAQADFGNR-------------------RARELRIDDH---VR 170 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHH-------------------HHHHTTCTTT---EE
T ss_pred CCEEEEecCCCCHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHH-------------------HHHHcCCCCc---eE
Confidence 5799999999999999999852 5799999999998887766 3333444444 88
Q ss_pred eeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 236 FSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+..++..+ ++..++.||+|+......+-+....++.+.++|+|||++++.+...
T Consensus 171 ~~~~d~~~-~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 171 SRVCNMLD-TPFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EEECCTTS-CCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECChhc-CCCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 88888765 3333579999997654333347789999999999999999887655
No 84
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.12 E-value=2e-10 Score=102.19 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=79.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. .++.+++++|+++.+.+.+++... ..+ + +
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~----~~~~~v~~vD~s~~~~~~a~~~~~-------------------~~~---~---~ 94 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEK----YPEATFTLVDMSEKMLEIAKNRFR-------------------GNL---K---V 94 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHH----CTTCEEEEEESCHHHHHHHHHHTC-------------------SCT---T---E
T ss_pred CCCeEEEecCCCCHHHHHHHHh----CCCCeEEEEECCHHHHHHHHHhhc-------------------cCC---C---E
Confidence 4689999999999999999985 357899999999998887766321 111 2 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCC-CcH--HHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDF-NSA--WADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~~v--~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+..++..+... .++||+|+......+ ... ...++++.+.|+|||++++.|...
T Consensus 95 ~~~~~d~~~~~~--~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 95 KYIEADYSKYDF--EEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp EEEESCTTTCCC--CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred EEEeCchhccCC--CCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 888888766322 278999998754322 222 247999999999999999988765
No 85
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.12 E-value=2.3e-10 Score=105.26 Aligned_cols=131 Identities=11% Similarity=-0.005 Sum_probs=99.1
Q ss_pred HHHHHhhcCC-CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 147 FGNLIDKVRP-RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 147 L~~L~~~~~p-~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
|+.+.+..++ .+|+|||||+|+.++.+|.. ++..+|+++|+++++.+.|++ |+...
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~----~~~~~V~avDi~~~al~~A~~-------------------N~~~~ 68 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKN----QTASFAIAGEVVDGPFQSAQK-------------------QVRSS 68 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHT----TSEEEEEEEESSHHHHHHHHH-------------------HHHHT
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHh----CCCCEEEEEECCHHHHHHHHH-------------------HHHHc
Confidence 4555555554 58999999999999999983 557799999999999998876 66666
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHH
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFA 305 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~ 305 (327)
|+.++ |.+..+|..+.+.. +.+||+|++-+.- .+-...-++.+.+.|++++.+|+.-.. | ...+..++
T Consensus 69 gl~~~---I~v~~gD~l~~~~~-~~~~D~IviagmG-g~lI~~IL~~~~~~L~~~~~lIlq~~~------~-~~~lr~~L 136 (244)
T 3gnl_A 69 GLTEQ---IDVRKGNGLAVIEK-KDAIDTIVIAGMG-GTLIRTILEEGAAKLAGVTKLILQPNI------A-AWQLREWS 136 (244)
T ss_dssp TCTTT---EEEEECSGGGGCCG-GGCCCEEEEEEEC-HHHHHHHHHHTGGGGTTCCEEEEEESS------C-HHHHHHHH
T ss_pred CCCce---EEEEecchhhccCc-cccccEEEEeCCc-hHHHHHHHHHHHHHhCCCCEEEEEcCC------C-hHHHHHHH
Confidence 76666 89999998886532 2359999984332 234566788999999999999986543 2 35666677
Q ss_pred HHcCCeE
Q 041517 306 KINGLKV 312 (327)
Q Consensus 306 ~~~gl~v 312 (327)
.++|+.+
T Consensus 137 ~~~Gf~i 143 (244)
T 3gnl_A 137 EQNNWLI 143 (244)
T ss_dssp HHHTEEE
T ss_pred HHCCCEE
Confidence 7788876
No 86
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.11 E-value=3.3e-10 Score=107.37 Aligned_cols=146 Identities=14% Similarity=0.149 Sum_probs=94.2
Q ss_pred HhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhc---c
Q 041517 151 IDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQN---A 227 (327)
Q Consensus 151 ~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g---~ 227 (327)
+...+..+|||||||+|+.++.+++. .++.++|+++|.++.+.+.++++.. .+-......+ .
T Consensus 101 l~~~~g~~VLDiG~G~G~~~~~la~~---~g~~~~v~~vD~~~~~~~~a~~~~~------------~~~~~~~ln~~~~~ 165 (336)
T 2b25_A 101 MDINPGDTVLEAGSGSGGMSLFLSKA---VGSQGRVISFEVRKDHHDLAKKNYK------------HWRDSWKLSHVEEW 165 (336)
T ss_dssp HTCCTTCEEEEECCTTSHHHHHHHHH---HCTTCEEEEEESSHHHHHHHHHHHH------------HHHHHHTTTCSSCC
T ss_pred cCCCCCCEEEEeCCCcCHHHHHHHHH---hCCCceEEEEeCCHHHHHHHHHHHH------------Hhhccccccccccc
Confidence 34455679999999999999999985 4667999999999999888876321 0000000001 1
Q ss_pred CCcccceEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHH
Q 041517 228 IDSVLPVPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAK 306 (327)
Q Consensus 228 ~~~v~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~ 306 (327)
.++ +.+..+|..+.+..+ +++||+|++|..... ..++.+.+.|+|||++++-... ...+.+.++.+.+
T Consensus 166 ~~~---v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~----~~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~ 234 (336)
T 2b25_A 166 PDN---VDFIHKDISGATEDIKSLTFDAVALDMLNPH----VTLPVFYPHLKHGGVCAVYVVN----ITQVIELLDGIRT 234 (336)
T ss_dssp CCC---EEEEESCTTCCC-------EEEEEECSSSTT----TTHHHHGGGEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred CCc---eEEEECChHHcccccCCCCeeEEEECCCCHH----HHHHHHHHhcCCCcEEEEEeCC----HHHHHHHHHHHHh
Confidence 123 888888877643222 357999999865422 4689999999999999975543 3456677766654
Q ss_pred H-cCCe----EEEccceEEEe
Q 041517 307 I-NGLK----VQIDGQHWVIH 322 (327)
Q Consensus 307 ~-~gl~----v~~~gq~w~i~ 322 (327)
. .++. .......|.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~w~~~ 255 (336)
T 2b25_A 235 CELALSCEKISEVIVRDWLVC 255 (336)
T ss_dssp HTCCEEEEEEECCCCCCEEEC
T ss_pred cCCCcccceEEEecccceEEE
Confidence 3 3322 22345667653
No 87
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.11 E-value=8.7e-10 Score=107.26 Aligned_cols=140 Identities=17% Similarity=0.130 Sum_probs=100.4
Q ss_pred HHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc
Q 041517 148 GNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA 227 (327)
Q Consensus 148 ~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~ 227 (327)
..+.+..+..+|||+|||+|..++.+|+. + ..+|+++|+++.+.+.+++ |+...+.
T Consensus 213 ~~l~~~~~~~~VLDl~cG~G~~sl~la~~----g-~~~V~~vD~s~~al~~a~~-------------------n~~~ngl 268 (396)
T 3c0k_A 213 LATRRYVENKRVLNCFSYTGGFAVSALMG----G-CSQVVSVDTSQEALDIARQ-------------------NVELNKL 268 (396)
T ss_dssp HHHHHHCTTCEEEEESCTTCSHHHHHHHT----T-CSEEEEEESCHHHHHHHHH-------------------HHHHTTC
T ss_pred HHHHHhhCCCeEEEeeccCCHHHHHHHHC----C-CCEEEEEECCHHHHHHHHH-------------------HHHHcCC
Confidence 33444456789999999999999999983 2 4699999999999888876 4444344
Q ss_pred -CCcccceEeeecchhhhhhhc---CCcEeEEEEcCCCC----------CCcHHHHHHHHHccCCCCeEEEEEcCCCCCC
Q 041517 228 -IDSVLPVPFSSGSALTKLCEW---GVVGDLIEIDAGHD----------FNSAWADINRAWRILRPGGVIFGHDYFTAAD 293 (327)
Q Consensus 228 -~~~v~~V~~~~gda~~~L~~l---~~~fDLIfIDa~h~----------~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~ 293 (327)
.++ +.+..+|+.+.++.+ +.+||+|++|...- .......+..+.++|+|||++++........
T Consensus 269 ~~~~---v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 345 (396)
T 3c0k_A 269 DLSK---AEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT 345 (396)
T ss_dssp CGGG---EEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC
T ss_pred Cccc---eEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC
Confidence 323 889999998876643 47899999995320 1334467888999999999999877665333
Q ss_pred chhHHHHHHHHHHHcCCeEEE
Q 041517 294 NRGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 294 ~~GV~~Av~~f~~~~gl~v~~ 314 (327)
...-.+.+.+.+...|.++..
T Consensus 346 ~~~~~~~i~~~~~~~g~~~~~ 366 (396)
T 3c0k_A 346 SDLFQKIIADAAIDAGRDVQF 366 (396)
T ss_dssp HHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEE
Confidence 224456666666667755543
No 88
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.11 E-value=6.3e-10 Score=98.98 Aligned_cols=125 Identities=18% Similarity=0.073 Sum_probs=86.8
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
...+|||||||+|..++.+|+. .++.++++||+++.+.+.+++ |+...+.. + +
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~----~p~~~v~giD~s~~~l~~a~~-------------------~~~~~~~~-n---v 90 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQ----NPDINYIGIELFKSVIVTAVQ-------------------KVKDSEAQ-N---V 90 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHH----CTTSEEEEECSCHHHHHHHHH-------------------HHHHSCCS-S---E
T ss_pred CCceEEEEecCCCHHHHHHHHH----CCCCCEEEEEechHHHHHHHH-------------------HHHHcCCC-C---E
Confidence 4679999999999999999985 457899999999999888766 33333331 2 8
Q ss_pred Eeeecchhhhhhh-c-CCcEeEEEEcCCCCCCc---------HHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHH
Q 041517 235 PFSSGSALTKLCE-W-GVVGDLIEIDAGHDFNS---------AWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNL 303 (327)
Q Consensus 235 ~~~~gda~~~L~~-l-~~~fDLIfIDa~h~~~~---------v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~ 303 (327)
.+..+|+.+ ++. + ++.||.|++...-.+.. ....++.+.++|+|||++++..-. ....+.+.+
T Consensus 91 ~~~~~d~~~-l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~-----~~~~~~~~~ 164 (213)
T 2fca_A 91 KLLNIDADT-LTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN-----RGLFEYSLK 164 (213)
T ss_dssp EEECCCGGG-HHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC-----HHHHHHHHH
T ss_pred EEEeCCHHH-HHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC-----HHHHHHHHH
Confidence 888898877 332 2 46899999864322111 236789999999999998875321 233334444
Q ss_pred HHHHcCCeE
Q 041517 304 FAKINGLKV 312 (327)
Q Consensus 304 f~~~~gl~v 312 (327)
.+...|+.+
T Consensus 165 ~~~~~g~~~ 173 (213)
T 2fca_A 165 SFSEYGLLL 173 (213)
T ss_dssp HHHHHTCEE
T ss_pred HHHHCCCcc
Confidence 445557654
No 89
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.11 E-value=4.3e-10 Score=112.32 Aligned_cols=141 Identities=18% Similarity=0.151 Sum_probs=101.3
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.++..++...+..+|||+|||.|..|+.+|+. ++..++|+++|+++.+.+.+++ |+..
T Consensus 91 ~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~---~~~~g~V~AvDis~~~l~~a~~-------------------n~~r 148 (464)
T 3m6w_A 91 QAVGVLLDPKPGERVLDLAAAPGGKTTHLAAR---MGGKGLLLANEVDGKRVRGLLE-------------------NVER 148 (464)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHH---TTTCSEEEEECSCHHHHHHHHH-------------------HHHH
T ss_pred HHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHH-------------------HHHH
Confidence 35555555556789999999999999999985 4556899999999988887765 5555
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCC-------c----------------HHHHHHHHHccCCCCe
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFN-------S----------------AWADINRAWRILRPGG 281 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~-------~----------------v~~dl~~~~~lL~pGG 281 (327)
.|.. |.+..+|+.+.....+++||+|++|+-.... . ....++.+.++|+|||
T Consensus 149 ~G~~-----v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG 223 (464)
T 3m6w_A 149 WGAP-----LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGG 223 (464)
T ss_dssp HCCC-----CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred cCCe-----EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5542 6777888877543457899999999653211 1 1457889999999999
Q ss_pred EEEEEcCCCCCCchhHHHHHHHHHHHc-CCeEEE
Q 041517 282 VIFGHDYFTAADNRGVRRAVNLFAKIN-GLKVQI 314 (327)
Q Consensus 282 vIi~dD~~~~~~~~GV~~Av~~f~~~~-gl~v~~ 314 (327)
+|+...+...+ ..=.+.+..|.+.+ ++++.+
T Consensus 224 ~LvysTCs~~~--eEne~vv~~~l~~~~~~~l~~ 255 (464)
T 3m6w_A 224 VLVYSTCTFAP--EENEGVVAHFLKAHPEFRLED 255 (464)
T ss_dssp EEEEEESCCCG--GGTHHHHHHHHHHCTTEEEEC
T ss_pred EEEEEeccCch--hcCHHHHHHHHHHCCCcEEEe
Confidence 99998887632 22234456666655 566554
No 90
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.11 E-value=2.3e-10 Score=105.71 Aligned_cols=109 Identities=17% Similarity=0.104 Sum_probs=83.2
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.+..+|||||||+|..+..+++.. +.+++++|+++.+.+.+++ ++...+..++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~~~~a~~-------------------~~~~~~~~~~--- 133 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF-----GVSIDCLNIAPVQNKRNEE-------------------YNNQAGLADN--- 133 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHH-------------------HHHHHTCTTT---
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh-----CCEEEEEeCCHHHHHHHHH-------------------HHHhcCCCcc---
Confidence 346799999999999999999852 4699999999998887765 2333344344
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+.+..++..+ ++..+++||+|+.... +........++++.+.|+|||++++.+...
T Consensus 134 ~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 134 ITVKYGSFLE-IPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EEEEECCTTS-CSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred eEEEEcCccc-CCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 7888887765 3433578999997643 334556788999999999999999988754
No 91
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.11 E-value=1.4e-10 Score=101.99 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=80.6
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..+....++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++.. ...
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~-------------------~~~ 96 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH------CKRLTVIDVMPRAIGRACQRT-------------------KRW 96 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSHHHHHHGGG------EEEEEEEESCHHHHHHHHHHT-------------------TTC
T ss_pred HHHHHcccCCCCcEEEEcCCCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHhc-------------------ccC
Confidence 4444444445679999999999999999874 469999999999888776632 111
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC-CcH---HHHHHHHHccCCCCeEEEEEcC
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF-NSA---WADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~~v---~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+ + +.+..++..+.. .+++||+|+......+ ... ...++.+.++|+|||++++.+.
T Consensus 97 ~---~---~~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 97 S---H---ISWAATDILQFS--TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp S---S---EEEEECCTTTCC--CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred C---C---eEEEEcchhhCC--CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 1 2 788888876643 3589999998754322 222 4669999999999999998653
No 92
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.11 E-value=2.2e-10 Score=101.82 Aligned_cols=112 Identities=16% Similarity=0.075 Sum_probs=80.2
Q ss_pred HHHHHHHh-hcCCCEEEEEcCcchHHHHHHHHHhccCC----CCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHH
Q 041517 145 AVFGNLID-KVRPRVIIEVGSFLGASALHMANLTRQLG----LDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFL 219 (327)
Q Consensus 145 ~lL~~L~~-~~~p~~VLEIGt~~G~Sal~lA~a~r~l~----~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl 219 (327)
.++..|.. ..+..+|||||||+|+.+..+++. .+ +.++|+++|.++.+.+.++++
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~---~~~~~~~~~~v~~vD~~~~~~~~a~~~----------------- 128 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIK---MNVLENKNSYVIGLERVKDLVNFSLEN----------------- 128 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHH---TTTTTCTTCEEEEEESCHHHHHHHHHH-----------------
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHH---hcccCCCCCEEEEEeCCHHHHHHHHHH-----------------
Confidence 45555542 234579999999999999999985 33 567999999999988887663
Q ss_pred HHHhhhcc----CCcccceEeeecchhhhhh---hcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 220 QNVIYQNA----IDSVLPVPFSSGSALTKLC---EWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 220 ~nv~~~g~----~~~v~~V~~~~gda~~~L~---~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+...+. ..+ +.+..++..+.++ ...++||+|++++.... .++.+.++|+|||++++.
T Consensus 129 --~~~~~~~~~~~~~---v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~-----~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 129 --IKRDKPELLKIDN---FKIIHKNIYQVNEEEKKELGLFDAIHVGASASE-----LPEILVDLLAENGKLIIP 192 (227)
T ss_dssp --HHHHCGGGGSSTT---EEEEECCGGGCCHHHHHHHCCEEEEEECSBBSS-----CCHHHHHHEEEEEEEEEE
T ss_pred --HHHcCccccccCC---EEEEECChHhcccccCccCCCcCEEEECCchHH-----HHHHHHHhcCCCcEEEEE
Confidence 222221 122 7888888776431 12468999999976532 247889999999998875
No 93
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.11 E-value=6.8e-10 Score=98.12 Aligned_cols=126 Identities=18% Similarity=0.111 Sum_probs=88.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
...+|||||||+|..++.+|+. .++.++++||+++.+.+.+++ |+...+. .+ +
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~----~p~~~v~gvD~s~~~l~~a~~-------------------~~~~~~~-~~---v 93 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQ----NPDINYIGIDIQKSVLSYALD-------------------KVLEVGV-PN---I 93 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHH----CTTSEEEEEESCHHHHHHHHH-------------------HHHHHCC-SS---E
T ss_pred CCCeEEEEccCcCHHHHHHHHH----CCCCCEEEEEcCHHHHHHHHH-------------------HHHHcCC-CC---E
Confidence 4679999999999999999985 347899999999999887766 3333333 22 8
Q ss_pred Eeeecchhhhhhh-c-CCcEeEEEEcCCCCCCc---------HHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHH
Q 041517 235 PFSSGSALTKLCE-W-GVVGDLIEIDAGHDFNS---------AWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNL 303 (327)
Q Consensus 235 ~~~~gda~~~L~~-l-~~~fDLIfIDa~h~~~~---------v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~ 303 (327)
.+..+++.+ ++. + ++.||+|+++....+.. ....++.+.++|+|||++++..-. ....+.+.+
T Consensus 94 ~~~~~d~~~-~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-----~~~~~~~~~ 167 (214)
T 1yzh_A 94 KLLWVDGSD-LTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN-----RGLFEYSLV 167 (214)
T ss_dssp EEEECCSSC-GGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC-----HHHHHHHHH
T ss_pred EEEeCCHHH-HHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC-----HHHHHHHHH
Confidence 888888776 332 2 46899999985422111 136789999999999998874321 233344444
Q ss_pred HHHHcCCeEE
Q 041517 304 FAKINGLKVQ 313 (327)
Q Consensus 304 f~~~~gl~v~ 313 (327)
.+...|+++.
T Consensus 168 ~~~~~g~~~~ 177 (214)
T 1yzh_A 168 SFSQYGMKLN 177 (214)
T ss_dssp HHHHHTCEEE
T ss_pred HHHHCCCeee
Confidence 5556677654
No 94
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.11 E-value=5.3e-10 Score=103.41 Aligned_cols=140 Identities=11% Similarity=0.076 Sum_probs=96.5
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..++...+..+|||+|||+|..+..+++. ++..++|+++|.++.+.+.+++ |+...
T Consensus 74 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~---~~~~~~v~avD~~~~~l~~~~~-------------------~~~~~ 131 (274)
T 3ajd_A 74 IPPIVLNPREDDFILDMCAAPGGKTTHLAQL---MKNKGTIVAVEISKTRTKALKS-------------------NINRM 131 (274)
T ss_dssp HHHHHHCCCTTCEEEETTCTTCHHHHHHHHH---TTTCSEEEEEESCHHHHHHHHH-------------------HHHHT
T ss_pred HHHHHhCCCCcCEEEEeCCCccHHHHHHHHH---cCCCCEEEEECCCHHHHHHHHH-------------------HHHHh
Confidence 4444555445679999999999999999985 3335899999999988877665 44444
Q ss_pred ccCCcccceEeeecchhhhhhhc---CCcEeEEEEcCCCCC-------------------CcHHHHHHHHHccCCCCeEE
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEW---GVVGDLIEIDAGHDF-------------------NSAWADINRAWRILRPGGVI 283 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l---~~~fDLIfIDa~h~~-------------------~~v~~dl~~~~~lL~pGGvI 283 (327)
|.. + +.+..+|+.+....+ .++||+|++|+.... ......++.+.++|+|||++
T Consensus 132 g~~-~---v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 207 (274)
T 3ajd_A 132 GVL-N---TIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGEL 207 (274)
T ss_dssp TCC-S---EEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEE
T ss_pred CCC-c---EEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 432 2 888888887754322 578999999943221 12346789999999999999
Q ss_pred EEEcCCCCCCchhHHHHHHHHHHH-cCCeEE
Q 041517 284 FGHDYFTAADNRGVRRAVNLFAKI-NGLKVQ 313 (327)
Q Consensus 284 i~dD~~~~~~~~GV~~Av~~f~~~-~gl~v~ 313 (327)
++..+...+. .-.+.++.|.+. .++++.
T Consensus 208 v~stcs~~~~--ene~~v~~~l~~~~~~~~~ 236 (274)
T 3ajd_A 208 VYSTCSMEVE--ENEEVIKYILQKRNDVELI 236 (274)
T ss_dssp EEEESCCCTT--SSHHHHHHHHHHCSSEEEE
T ss_pred EEEECCCChH--HhHHHHHHHHHhCCCcEEe
Confidence 9988765321 113445555544 345544
No 95
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.11 E-value=7.4e-10 Score=107.67 Aligned_cols=142 Identities=16% Similarity=0.166 Sum_probs=101.2
Q ss_pred HHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhc
Q 041517 148 GNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQN 226 (327)
Q Consensus 148 ~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g 226 (327)
..+.+.. +..+|||+|||+|..++.+|+. + ..+|+++|.++.+.+.+++ |+...+
T Consensus 209 ~~~~~~~~~~~~VLDl~~G~G~~~~~la~~----g-~~~v~~vD~s~~~l~~a~~-------------------n~~~n~ 264 (396)
T 2as0_A 209 LALEKWVQPGDRVLDVFTYTGGFAIHAAIA----G-ADEVIGIDKSPRAIETAKE-------------------NAKLNG 264 (396)
T ss_dssp HHHGGGCCTTCEEEETTCTTTHHHHHHHHT----T-CSEEEEEESCHHHHHHHHH-------------------HHHHTT
T ss_pred HHHHHHhhCCCeEEEecCCCCHHHHHHHHC----C-CCEEEEEeCCHHHHHHHHH-------------------HHHHcC
Confidence 3344445 5789999999999999999983 2 4699999999999888876 444334
Q ss_pred cCCcccceEeeecchhhhhhhc---CCcEeEEEEcCCCCC----------CcHHHHHHHHHccCCCCeEEEEEcCCCCCC
Q 041517 227 AIDSVLPVPFSSGSALTKLCEW---GVVGDLIEIDAGHDF----------NSAWADINRAWRILRPGGVIFGHDYFTAAD 293 (327)
Q Consensus 227 ~~~~v~~V~~~~gda~~~L~~l---~~~fDLIfIDa~h~~----------~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~ 293 (327)
+.++ +.+..+|+.+.++.+ +.+||+|++|...-. ......+..+.++|+|||+|++..+.....
T Consensus 265 ~~~~---v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~ 341 (396)
T 2as0_A 265 VEDR---MKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVD 341 (396)
T ss_dssp CGGG---EEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSC
T ss_pred CCcc---ceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCC
Confidence 4323 889999988876543 578999999954211 123456788999999999999888765433
Q ss_pred chhHHHHHHHHHHHcCCeEEEcc
Q 041517 294 NRGVRRAVNLFAKINGLKVQIDG 316 (327)
Q Consensus 294 ~~GV~~Av~~f~~~~gl~v~~~g 316 (327)
.....+.+.+.+...+.+++...
T Consensus 342 ~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 342 LQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp HHHHHHHHHHHHHHTTEEEEESS
T ss_pred HHHHHHHHHHHHHHcCCeEEEEe
Confidence 33355666666666776665443
No 96
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.10 E-value=3.1e-10 Score=105.07 Aligned_cols=128 Identities=14% Similarity=0.124 Sum_probs=94.4
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.+..+|||+|||+|..++.+|+. .+.++|+++|.++.+.+.+++ |+...+.. .
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~----~~~~~V~~vD~s~~av~~a~~-------------------n~~~n~l~-~--- 170 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKY----SKPKLVYAIEKNPTAYHYLCE-------------------NIKLNKLN-N--- 170 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHH----TCCSEEEEEECCHHHHHHHHH-------------------HHHHTTCS-S---
T ss_pred CCCCEEEEecCcCCHHHHHHHHh----CCCCEEEEEeCCHHHHHHHHH-------------------HHHHcCCC-C---
Confidence 34679999999999999999985 236799999999999888776 44433432 2
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCc-hhHHHHHHHHHHHcCCeE
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADN-RGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~-~GV~~Av~~f~~~~gl~v 312 (327)
+.+..+|+.+. +. +..||+|++|... .....++.+.+.|+|||++++.+....... ....+.++.+.+..+.++
T Consensus 171 ~~~~~~d~~~~-~~-~~~~D~Vi~d~p~---~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (272)
T 3a27_A 171 VIPILADNRDV-EL-KDVADRVIMGYVH---KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKL 245 (272)
T ss_dssp EEEEESCGGGC-CC-TTCEEEEEECCCS---SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEE
T ss_pred EEEEECChHHc-Cc-cCCceEEEECCcc---cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCee
Confidence 67888988875 43 5789999999764 233578899999999999998877652221 235566777776665554
Q ss_pred E
Q 041517 313 Q 313 (327)
Q Consensus 313 ~ 313 (327)
.
T Consensus 246 ~ 246 (272)
T 3a27_A 246 I 246 (272)
T ss_dssp E
T ss_pred E
Confidence 4
No 97
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.10 E-value=3.6e-10 Score=105.37 Aligned_cols=112 Identities=14% Similarity=0.050 Sum_probs=85.5
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc-CCccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA-IDSVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~-~~~v~ 232 (327)
.++++|||||||.|..+..+++ ..+..++++||+++.+.+.++++.. ... .++ ..+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~----~~~~~~v~~vDid~~~i~~a~~~~~----------------~~~-~~~~~~~-- 133 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCK----YKSVENIDICEIDETVIEVSKIYFK----------------NIS-CGYEDKR-- 133 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTT----CTTCCEEEEEESCHHHHHHHHHHCT----------------TTS-GGGGSTT--
T ss_pred CCCCeEEEEeCCcCHHHHHHHH----cCCCCEEEEEECCHHHHHHHHHHhH----------------Hhc-cccCCCc--
Confidence 3578999999999999999886 3457899999999999998887542 000 011 123
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcH-----HHHHHHHHccCCCCeEEEEEcCC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSA-----WADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v-----~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+++..+|+.+.++..+++||+|++|......+. ...++.+.+.|+|||++++....
T Consensus 134 -v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 134 -VNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp -EEEEESCHHHHHHHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred -EEEEECChHHHHHhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 888999998877665789999999975432111 47899999999999999998653
No 98
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.10 E-value=3.8e-10 Score=97.20 Aligned_cols=109 Identities=15% Similarity=0.027 Sum_probs=79.9
Q ss_pred HHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccC
Q 041517 149 NLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI 228 (327)
Q Consensus 149 ~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~ 228 (327)
.++...++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++. +...+..
T Consensus 26 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~-------------------~~~~~~~ 80 (199)
T 2xvm_A 26 EAVKVVKPGKTLDLGCGNGRNSLYLAAN------GYDVDAWDKNAMSIANVERI-------------------KSIENLD 80 (199)
T ss_dssp HHTTTSCSCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHH-------------------HHHHTCT
T ss_pred HHhhccCCCeEEEEcCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHH-------------------HHhCCCC
Confidence 3345557889999999999999999984 57999999999988877652 2222221
Q ss_pred CcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC---CcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 229 DSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF---NSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 229 ~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~---~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
. +.+..++..+. +. +++||+|+......+ +.....++.+.++|+|||++++-+.
T Consensus 81 -~---~~~~~~d~~~~-~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 81 -N---LHTRVVDLNNL-TF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp -T---EEEEECCGGGC-CC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -C---cEEEEcchhhC-CC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 1 77778876653 33 678999998754322 2456789999999999998766443
No 99
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.09 E-value=7.9e-10 Score=101.57 Aligned_cols=115 Identities=17% Similarity=0.107 Sum_probs=84.3
Q ss_pred HHHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 145 AVFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 145 ~lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
..+..+++.. +..+|||||||+|..+..+++. . +.+|+++|+++.+.+.+++ +
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~--~~~v~gvd~s~~~~~~a~~-------------------~ 106 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEK---Y--DVNVVGLTLSKNQANHVQQ-------------------L 106 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHH---H--CCEEEEEESCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHH---c--CCEEEEEECCHHHHHHHHH-------------------H
Confidence 3555555543 3569999999999999999964 2 4599999999998887765 3
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCC-CC--CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGH-DF--NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h-~~--~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+...+..++ +.+..++..+ ++ ++||+|+..... .. ......++.+.++|+|||++++.+...
T Consensus 107 ~~~~~~~~~---~~~~~~d~~~-~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 107 VANSENLRS---KRVLLAGWEQ-FD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp HHTCCCCSC---EEEEESCGGG-CC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred HHhcCCCCC---eEEEECChhh-CC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 333333334 7788887654 23 789999976432 12 345678999999999999999988765
No 100
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.09 E-value=3e-10 Score=98.76 Aligned_cols=113 Identities=12% Similarity=0.034 Sum_probs=81.7
Q ss_pred HHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhc
Q 041517 147 FGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQN 226 (327)
Q Consensus 147 L~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g 226 (327)
+..++...++++|||||||+|..+..+++. +.+++++|+++.+.+.+++. ....+
T Consensus 21 l~~~~~~~~~~~vLdiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~-------------------~~~~~ 75 (202)
T 2kw5_A 21 LVSVANQIPQGKILCLAEGEGRNACFLASL------GYEVTAVDQSSVGLAKAKQL-------------------AQEKG 75 (202)
T ss_dssp HHHHHHHSCSSEEEECCCSCTHHHHHHHTT------TCEEEEECSSHHHHHHHHHH-------------------HHHHT
T ss_pred HHHHHHhCCCCCEEEECCCCCHhHHHHHhC------CCeEEEEECCHHHHHHHHHH-------------------HHhcC
Confidence 344444455569999999999999998873 56999999999888877652 22222
Q ss_pred cCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC-CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 227 AIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF-NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 227 ~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
. .+.+..++..+. +..++.||+|+....|.. ......++.+.+.|+|||++++.++..
T Consensus 76 ~-----~~~~~~~d~~~~-~~~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 76 V-----KITTVQSNLADF-DIVADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp C-----CEEEECCBTTTB-SCCTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred C-----ceEEEEcChhhc-CCCcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 2 277777776552 322478999998655532 235667899999999999999987654
No 101
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.09 E-value=3.9e-10 Score=104.69 Aligned_cols=117 Identities=20% Similarity=0.108 Sum_probs=84.7
Q ss_pred HHHHHHhh--cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 146 VFGNLIDK--VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 146 lL~~L~~~--~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
++..|.+. .++.+|||||||+|..+..+++. +.+..+|+++|+++.+.+.+++.. .
T Consensus 25 ~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~~~~v~gvD~s~~~~~~a~~~~-------------------~ 82 (299)
T 3g5t_A 25 FYKMIDEYHDGERKLLVDVGCGPGTATLQMAQE---LKPFEQIIGSDLSATMIKTAEVIK-------------------E 82 (299)
T ss_dssp HHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHH---SSCCSEEEEEESCHHHHHHHHHHH-------------------H
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHh---CCCCCEEEEEeCCHHHHHHHHHHH-------------------H
Confidence 44444443 25789999999999999999984 345899999999999988876632 2
Q ss_pred hh-ccCCcccceEeeecchhhhhhhcC------CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 224 YQ-NAIDSVLPVPFSSGSALTKLCEWG------VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 224 ~~-g~~~~v~~V~~~~gda~~~L~~l~------~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
.. +...+ +.+..++..+. +... ++||+|+......+-.....++.+.++|+|||++++-++
T Consensus 83 ~~~~~~~~---v~~~~~d~~~~-~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~~ 150 (299)
T 3g5t_A 83 GSPDTYKN---VSFKISSSDDF-KFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWGY 150 (299)
T ss_dssp HCC-CCTT---EEEEECCTTCC-GGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hccCCCCc---eEEEEcCHHhC-CccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEec
Confidence 11 11223 88888887663 3333 689999987542222677899999999999999988433
No 102
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.09 E-value=7.7e-11 Score=104.07 Aligned_cols=117 Identities=3% Similarity=-0.166 Sum_probs=74.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||+|||+|..+.+||+. +.+|++||+++.|.+.|++........... .+.... ...+ +
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~-------~~~~~~-~~~~---v 84 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ------GYHVVGAELSEAAVERYFTERGEQPHITSQ-------GDFKVY-AAPG---I 84 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH------CCEEEEEEECHHHHHHHHHHHCSCSEEEEE-------TTEEEE-ECSS---S
T ss_pred CCCEEEEeCCCCcHhHHHHHHC------CCeEEEEeCCHHHHHHHHHHccCCcccccc-------cccccc-cCCc---c
Confidence 5689999999999999999984 579999999999998886632100000000 000000 0112 7
Q ss_pred EeeecchhhhhhhcC-CcEeEEEEcCCC-CCC--cHHHHHHHHHccCCCCeE--EEEEcCC
Q 041517 235 PFSSGSALTKLCEWG-VVGDLIEIDAGH-DFN--SAWADINRAWRILRPGGV--IFGHDYF 289 (327)
Q Consensus 235 ~~~~gda~~~L~~l~-~~fDLIfIDa~h-~~~--~v~~dl~~~~~lL~pGGv--Ii~dD~~ 289 (327)
++..+|..+. +..+ ++||+|+.-+.. ..+ .....++++.++|+|||+ ++..++.
T Consensus 85 ~~~~~d~~~l-~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~ 144 (203)
T 1pjz_A 85 EIWCGDFFAL-TARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYD 144 (203)
T ss_dssp EEEEECCSSS-THHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSC
T ss_pred EEEECccccC-CcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecC
Confidence 7888876653 2222 589999965432 122 233578999999999997 5555553
No 103
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.08 E-value=2.4e-10 Score=99.35 Aligned_cols=108 Identities=15% Similarity=-0.038 Sum_probs=64.6
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.++.+|||+|||+|..++.+++. .++.+++++|+++.+.+.++++. ...+. .
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~----~~~~~v~~vD~~~~~~~~a~~~~-------------------~~~~~-----~ 80 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALA----CPGVSVTAVDLSMDALAVARRNA-------------------ERFGA-----V 80 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHH----CTTEEEEEEECC-----------------------------------------
T ss_pred CCCCEEEEecCCHhHHHHHHHHh----CCCCeEEEEECCHHHHHHHHHHH-------------------HHhCC-----c
Confidence 45679999999999999999985 35789999999999998887632 21121 1
Q ss_pred eEeeecchhhhhhh---cCCcEeEEEEcCCCCC-C-------c-------------------HHHHHHHHHccCCCCeEE
Q 041517 234 VPFSSGSALTKLCE---WGVVGDLIEIDAGHDF-N-------S-------------------AWADINRAWRILRPGGVI 283 (327)
Q Consensus 234 V~~~~gda~~~L~~---l~~~fDLIfIDa~h~~-~-------~-------------------v~~dl~~~~~lL~pGGvI 283 (327)
+++..+|..+.++. ..++||+|+.|...-. . . ....++.+.++|+|||++
T Consensus 81 ~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 160 (215)
T 4dzr_A 81 VDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAG 160 (215)
T ss_dssp --CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEE
T ss_pred eEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeE
Confidence 66777777775443 2378999999632100 0 0 145667788999999994
Q ss_pred EEEcCC
Q 041517 284 FGHDYF 289 (327)
Q Consensus 284 i~dD~~ 289 (327)
++-.+.
T Consensus 161 ~~~~~~ 166 (215)
T 4dzr_A 161 VFLEVG 166 (215)
T ss_dssp EEEECT
T ss_pred EEEEEC
Confidence 443443
No 104
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.08 E-value=3.3e-10 Score=99.06 Aligned_cols=131 Identities=15% Similarity=0.087 Sum_probs=93.6
Q ss_pred HHHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 145 AVFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 145 ~lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
.++..+.... +..+|||||||+|..++.+++. + ..+++++|.++.+.+.+++ ++.
T Consensus 49 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~----~-~~~v~~vD~s~~~~~~a~~-------------------~~~ 104 (205)
T 3grz_A 49 LAMLGIERAMVKPLTVADVGTGSGILAIAAHKL----G-AKSVLATDISDESMTAAEE-------------------NAA 104 (205)
T ss_dssp HHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT----T-CSEEEEEESCHHHHHHHHH-------------------HHH
T ss_pred HHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC----C-CCEEEEEECCHHHHHHHHH-------------------HHH
Confidence 3445544433 4679999999999999998873 2 5699999999998887766 333
Q ss_pred hhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHH
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNL 303 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~ 303 (327)
..+..+ +.+..++..+. .+++||+|+.+... +.....++.+.++|+|||++++.++... -.+.+..
T Consensus 105 ~~~~~~----v~~~~~d~~~~---~~~~fD~i~~~~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~-----~~~~~~~ 170 (205)
T 3grz_A 105 LNGIYD----IALQKTSLLAD---VDGKFDLIVANILA--EILLDLIPQLDSHLNEDGQVIFSGIDYL-----QLPKIEQ 170 (205)
T ss_dssp HTTCCC----CEEEESSTTTT---CCSCEEEEEEESCH--HHHHHHGGGSGGGEEEEEEEEEEEEEGG-----GHHHHHH
T ss_pred HcCCCc----eEEEecccccc---CCCCceEEEECCcH--HHHHHHHHHHHHhcCCCCEEEEEecCcc-----cHHHHHH
Confidence 333321 67777776553 34789999998643 3345668888999999999999776652 2455666
Q ss_pred HHHHcCCeEE
Q 041517 304 FAKINGLKVQ 313 (327)
Q Consensus 304 f~~~~gl~v~ 313 (327)
.++..|+++.
T Consensus 171 ~~~~~Gf~~~ 180 (205)
T 3grz_A 171 ALAENSFQID 180 (205)
T ss_dssp HHHHTTEEEE
T ss_pred HHHHcCCceE
Confidence 7777887754
No 105
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.08 E-value=4.5e-10 Score=103.36 Aligned_cols=125 Identities=17% Similarity=0.229 Sum_probs=89.6
Q ss_pred HhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCc
Q 041517 151 IDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDS 230 (327)
Q Consensus 151 ~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~ 230 (327)
+...+..+|||+|||+|..++.+++. +++.++++++|.++.+.+.+++ |+...+..++
T Consensus 108 ~~~~~~~~VLDiG~G~G~~~~~la~~---~~~~~~v~~vD~s~~~~~~a~~-------------------~~~~~~~~~~ 165 (277)
T 1o54_A 108 LDVKEGDRIIDTGVGSGAMCAVLARA---VGSSGKVFAYEKREEFAKLAES-------------------NLTKWGLIER 165 (277)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHH---TTTTCEEEEECCCHHHHHHHHH-------------------HHHHTTCGGG
T ss_pred hCCCCCCEEEEECCcCCHHHHHHHHH---hCCCcEEEEEECCHHHHHHHHH-------------------HHHHcCCCCC
Confidence 34445679999999999999999985 5668999999999998887766 3333333233
Q ss_pred ccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCC
Q 041517 231 VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGL 310 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl 310 (327)
+.+..++..+.++ ++.||+|++|.. ..+..++.+.+.|+|||++++-+... ..+.+..+.+ +..|+
T Consensus 166 ---v~~~~~d~~~~~~--~~~~D~V~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~----~~~~~~~~~l-~~~gf 231 (277)
T 1o54_A 166 ---VTIKVRDISEGFD--EKDVDALFLDVP----DPWNYIDKCWEALKGGGRFATVCPTT----NQVQETLKKL-QELPF 231 (277)
T ss_dssp ---EEEECCCGGGCCS--CCSEEEEEECCS----CGGGTHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHH-HHSSE
T ss_pred ---EEEEECCHHHccc--CCccCEEEECCc----CHHHHHHHHHHHcCCCCEEEEEeCCH----HHHHHHHHHH-HHCCC
Confidence 7888888776532 368999999753 23478899999999999999866532 2344444443 44666
Q ss_pred e
Q 041517 311 K 311 (327)
Q Consensus 311 ~ 311 (327)
.
T Consensus 232 ~ 232 (277)
T 1o54_A 232 I 232 (277)
T ss_dssp E
T ss_pred c
Confidence 5
No 106
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.08 E-value=1.3e-09 Score=99.66 Aligned_cols=137 Identities=18% Similarity=0.109 Sum_probs=96.8
Q ss_pred HHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 146 VFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 146 lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.+..|.+.. +..+|||+|||+|..++.+++. + .+|+++|+++.+.+.+++ |+..
T Consensus 110 ~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~----g--~~v~gvDi~~~~v~~a~~-------------------n~~~ 164 (254)
T 2nxc_A 110 ALKALARHLRPGDKVLDLGTGSGVLAIAAEKL----G--GKALGVDIDPMVLPQAEA-------------------NAKR 164 (254)
T ss_dssp HHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT----T--CEEEEEESCGGGHHHHHH-------------------HHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh----C--CeEEEEECCHHHHHHHHH-------------------HHHH
Confidence 444444333 4679999999999999998873 3 399999999999988776 3333
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHH
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLF 304 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f 304 (327)
.+.. +.+..++..+.++ ..+||+|+.+... +.....++.+.++|+|||++++.++... -.+.+...
T Consensus 165 ~~~~-----v~~~~~d~~~~~~--~~~fD~Vv~n~~~--~~~~~~l~~~~~~LkpgG~lils~~~~~-----~~~~v~~~ 230 (254)
T 2nxc_A 165 NGVR-----PRFLEGSLEAALP--FGPFDLLVANLYA--ELHAALAPRYREALVPGGRALLTGILKD-----RAPLVREA 230 (254)
T ss_dssp TTCC-----CEEEESCHHHHGG--GCCEEEEEEECCH--HHHHHHHHHHHHHEEEEEEEEEEEEEGG-----GHHHHHHH
T ss_pred cCCc-----EEEEECChhhcCc--CCCCCEEEECCcH--HHHHHHHHHHHHHcCCCCEEEEEeeccC-----CHHHHHHH
Confidence 2321 6677787776543 3689999987543 3345778999999999999999877652 24556666
Q ss_pred HHHcCCeEE--EccceEEE
Q 041517 305 AKINGLKVQ--IDGQHWVI 321 (327)
Q Consensus 305 ~~~~gl~v~--~~gq~w~i 321 (327)
++..|+++. .....|+.
T Consensus 231 l~~~Gf~~~~~~~~~~W~~ 249 (254)
T 2nxc_A 231 MAGAGFRPLEEAAEGEWVL 249 (254)
T ss_dssp HHHTTCEEEEEEEETTEEE
T ss_pred HHHCCCEEEEEeccCCeEE
Confidence 677888764 23445653
No 107
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.08 E-value=9e-10 Score=106.73 Aligned_cols=146 Identities=17% Similarity=0.054 Sum_probs=102.2
Q ss_pred CC-chHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHH
Q 041517 139 GW-GSYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQ 217 (327)
Q Consensus 139 gw-~~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~ 217 (327)
+| ..+......+... +..+|||+|||+|..++.+|+. ..+|+++|+++.+.+.+++
T Consensus 193 g~f~~~~~~~~~~~~~-~~~~VLDlg~G~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~---------------- 249 (382)
T 1wxx_A 193 GAYLDQRENRLYMERF-RGERALDVFSYAGGFALHLALG------FREVVAVDSSAEALRRAEE---------------- 249 (382)
T ss_dssp CCCGGGHHHHHHGGGC-CEEEEEEETCTTTHHHHHHHHH------EEEEEEEESCHHHHHHHHH----------------
T ss_pred ccccchHHHHHHHHhc-CCCeEEEeeeccCHHHHHHHHh------CCEEEEEECCHHHHHHHHH----------------
Confidence 44 3333333344444 6679999999999999999984 5789999999999888876
Q ss_pred HHHHHhhhccCCcccceEeeecchhhhhhhc---CCcEeEEEEcCCCCC----------CcHHHHHHHHHccCCCCeEEE
Q 041517 218 FLQNVIYQNAIDSVLPVPFSSGSALTKLCEW---GVVGDLIEIDAGHDF----------NSAWADINRAWRILRPGGVIF 284 (327)
Q Consensus 218 Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l---~~~fDLIfIDa~h~~----------~~v~~dl~~~~~lL~pGGvIi 284 (327)
|+...+..+ +.+..+|+.+.++.+ +.+||+|++|...-. ......+..+.++|+|||+++
T Consensus 250 ---n~~~n~~~~----~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 322 (382)
T 1wxx_A 250 ---NARLNGLGN----VRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILA 322 (382)
T ss_dssp ---HHHHTTCTT----EEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred ---HHHHcCCCC----ceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 444334322 788899998876654 578999999963211 122346788999999999999
Q ss_pred EEcCCCCCCchhHHHHHHHHHHHcCCeEEE
Q 041517 285 GHDYFTAADNRGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 285 ~dD~~~~~~~~GV~~Av~~f~~~~gl~v~~ 314 (327)
+..+........-.+.+.+.+...|.++..
T Consensus 323 ~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 352 (382)
T 1wxx_A 323 TASCSHHMTEPLFYAMVAEAAQDAHRLLRV 352 (382)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEECCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 987765333233456666666777755543
No 108
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.07 E-value=1e-09 Score=108.14 Aligned_cols=118 Identities=11% Similarity=0.120 Sum_probs=86.2
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccC-Ccccc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI-DSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~-~~v~~ 233 (327)
+..+|||||||+|..++.+|.. .+ ..++++||+++.+.++|+++.+ .|.+++...|+. ++
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~---~g-~~kVvGIDiS~~~lelAr~n~e------------~frkr~~~~Gl~~~r--- 233 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAA---TN-CKHHYGVEKADIPAKYAETMDR------------EFRKWMKWYGKKHAE--- 233 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH---CC-CSEEEEEECCHHHHHHHHHHHH------------HHHHHHHHHTBCCCE---
T ss_pred CCCEEEEeCCCCCHHHHHHHHH---CC-CCEEEEEeCCHHHHHHHHHHHH------------HHHHHHHHhCCCCCC---
Confidence 4579999999999999999974 22 4579999999999988876431 233334444442 34
Q ss_pred eEeeecchhhhhhhcC--CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCC
Q 041517 234 VPFSSGSALTKLCEWG--VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAA 292 (327)
Q Consensus 234 V~~~~gda~~~L~~l~--~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~ 292 (327)
|.+..||..+. +..+ ..||+||+..-.-.+.....|.+.++.|+|||.||+.+.....
T Consensus 234 Vefi~GD~~~l-p~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 234 YTLERGDFLSE-EWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp EEEEECCTTSH-HHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred eEEEECcccCC-ccccccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 89999998763 2211 3699999865432355677889999999999999999887643
No 109
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.07 E-value=2.7e-10 Score=101.07 Aligned_cols=110 Identities=15% Similarity=0.099 Sum_probs=82.9
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.++..+....++.+|||||||+|..+..+++. ..+|+++|+++.+.+.+++... .
T Consensus 32 ~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~-------------------~ 86 (250)
T 2p7i_A 32 FMVRAFTPFFRPGNLLELGSFKGDFTSRLQEH------FNDITCVEASEEAISHAQGRLK-------------------D 86 (250)
T ss_dssp HHHHHHGGGCCSSCEEEESCTTSHHHHHHTTT------CSCEEEEESCHHHHHHHHHHSC-------------------S
T ss_pred HHHHHHHhhcCCCcEEEECCCCCHHHHHHHHh------CCcEEEEeCCHHHHHHHHHhhh-------------------C
Confidence 35555555567789999999999999999873 3489999999988877765321 0
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCC-CCCcHHHHHHHHH-ccCCCCeEEEEEcCC
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGH-DFNSAWADINRAW-RILRPGGVIFGHDYF 289 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h-~~~~v~~dl~~~~-~lL~pGGvIi~dD~~ 289 (327)
.+.+..++..+.. .+++||+|+.-... ..+.....++++. ++|+|||++++.+..
T Consensus 87 --------~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 87 --------GITYIHSRFEDAQ--LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp --------CEEEEESCGGGCC--CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred --------CeEEEEccHHHcC--cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 1788888876642 35789999986542 2345568899999 999999999987754
No 110
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.06 E-value=8.7e-10 Score=107.05 Aligned_cols=139 Identities=14% Similarity=0.078 Sum_probs=96.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
..++|||+|||+|..++.+++. .++.+|++||.++.+.+.++++ +...+..+. ..+
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~----~p~~~V~gvD~s~~al~~Ar~n-------------------~~~ngl~~~-~~v 277 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDK----NPQAKVVFVDESPMAVASSRLN-------------------VETNMPEAL-DRC 277 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHH----CTTCEEEEEESCHHHHHHHHHH-------------------HHHHCGGGG-GGE
T ss_pred CCCeEEEEeCcchHHHHHHHHH----CCCCEEEEEECcHHHHHHHHHH-------------------HHHcCCCcC-ceE
Confidence 3479999999999999999985 4578999999999998888763 333333221 227
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCC------CCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHc
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHD------FNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKIN 308 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~------~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~ 308 (327)
++..++..+.++ +++||+|+.+.... .......++.+.++|+|||++++-.-. ..+....+++...
T Consensus 278 ~~~~~D~~~~~~--~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~----~~~~~~~l~~~fg-- 349 (375)
T 4dcm_A 278 EFMINNALSGVE--PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR----HLDYFHKLKKIFG-- 349 (375)
T ss_dssp EEEECSTTTTCC--TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET----TSCHHHHHHHHHS--
T ss_pred EEEechhhccCC--CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC----CcCHHHHHHHhcC--
Confidence 778888776432 46899999984421 222345689999999999988874322 2344455555444
Q ss_pred CCeEEEccceEEEeccc
Q 041517 309 GLKVQIDGQHWVIHSAV 325 (327)
Q Consensus 309 gl~v~~~gq~w~i~~~~ 325 (327)
..++......+.|.+++
T Consensus 350 ~~~~~a~~~~F~V~~~~ 366 (375)
T 4dcm_A 350 NCTTIATNNKFVVLKAV 366 (375)
T ss_dssp CCEEEEECSSEEEEEEE
T ss_pred CEEEEeeCCCEEEEEEc
Confidence 56666667777776654
No 111
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.06 E-value=2.2e-10 Score=105.28 Aligned_cols=121 Identities=12% Similarity=0.044 Sum_probs=85.7
Q ss_pred cCCchHHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHH
Q 041517 138 KGWGSYGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQ 217 (327)
Q Consensus 138 ~gw~~~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~ 217 (327)
.++ ..+.+|..++...+..+|||+|||+|..++.+++. .++.+|++||+++.+.+.++++.
T Consensus 20 ~g~-~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~----~~~~~v~gvDi~~~~~~~a~~n~-------------- 80 (260)
T 2ozv_A 20 QGH-MDAMLLASLVADDRACRIADLGAGAGAAGMAVAAR----LEKAEVTLYERSQEMAEFARRSL-------------- 80 (260)
T ss_dssp ----CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHH----CTTEEEEEEESSHHHHHHHHHHT--------------
T ss_pred CCc-cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHh----CCCCeEEEEECCHHHHHHHHHHH--------------
Confidence 344 45667777666556779999999999999999984 34689999999999998887743
Q ss_pred HHHHHhh---hccCCcccceEeeecchhhhhhh-----c-CCcEeEEEEcCCCC-------------------CCcHHHH
Q 041517 218 FLQNVIY---QNAIDSVLPVPFSSGSALTKLCE-----W-GVVGDLIEIDAGHD-------------------FNSAWAD 269 (327)
Q Consensus 218 Fl~nv~~---~g~~~~v~~V~~~~gda~~~L~~-----l-~~~fDLIfIDa~h~-------------------~~~v~~d 269 (327)
.. .++.++ +.+..+|..+.++. + +.+||+|+.+-..- .......
T Consensus 81 -----~~~~~~~l~~~---v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~ 152 (260)
T 2ozv_A 81 -----ELPDNAAFSAR---IEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDW 152 (260)
T ss_dssp -----TSGGGTTTGGG---EEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHH
T ss_pred -----HhhhhCCCcce---EEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHH
Confidence 22 333334 78888887765331 1 47899999982110 0123456
Q ss_pred HHHHHccCCCCeEEEE
Q 041517 270 INRAWRILRPGGVIFG 285 (327)
Q Consensus 270 l~~~~~lL~pGGvIi~ 285 (327)
++.+.++|+|||++++
T Consensus 153 l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 153 IRTASAIMVSGGQLSL 168 (260)
T ss_dssp HHHHHHHEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEE
Confidence 8889999999998877
No 112
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.06 E-value=3.8e-10 Score=101.25 Aligned_cols=142 Identities=11% Similarity=-0.002 Sum_probs=95.6
Q ss_pred HHHHHHHHhhc----CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHH
Q 041517 144 GAVFGNLIDKV----RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFL 219 (327)
Q Consensus 144 g~lL~~L~~~~----~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl 219 (327)
..++..++... ++.+|||||||+|..+..+++. . ..+++++|+++.+.+.+++...
T Consensus 64 ~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~----~-~~~v~~vD~s~~~~~~a~~~~~--------------- 123 (241)
T 2ex4_A 64 RKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLP----L-FREVDMVDITEDFLVQAKTYLG--------------- 123 (241)
T ss_dssp HHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTT----T-CSEEEEEESCHHHHHHHHHHTG---------------
T ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHh----c-CCEEEEEeCCHHHHHHHHHHhh---------------
Confidence 45666666544 4789999999999999998873 2 5699999999999888776331
Q ss_pred HHHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC-Cc--HHHHHHHHHccCCCCeEEEEEcCCCCC----
Q 041517 220 QNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF-NS--AWADINRAWRILRPGGVIFGHDYFTAA---- 292 (327)
Q Consensus 220 ~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~~--v~~dl~~~~~lL~pGGvIi~dD~~~~~---- 292 (327)
..+ .. .+.+..++..+. +..+++||+|+++....+ .. ....++.+.++|+|||++++.+.....
T Consensus 124 ----~~~-~~---~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 194 (241)
T 2ex4_A 124 ----EEG-KR---VRNYFCCGLQDF-TPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVIL 194 (241)
T ss_dssp ----GGG-GG---EEEEEECCGGGC-CCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEE
T ss_pred ----hcC-Cc---eEEEEEcChhhc-CCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCccee
Confidence 111 01 167777776542 333468999998865322 22 346789999999999999987653310
Q ss_pred -----CchhHHHHHHHHHHHcCCeEEE
Q 041517 293 -----DNRGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 293 -----~~~GV~~Av~~f~~~~gl~v~~ 314 (327)
.+.--.+.+..+++..|+++..
T Consensus 195 ~~~~~~~~~~~~~~~~~l~~aGf~~~~ 221 (241)
T 2ex4_A 195 DDVDSSVCRDLDVVRRIICSAGLSLLA 221 (241)
T ss_dssp ETTTTEEEEBHHHHHHHHHHTTCCEEE
T ss_pred cccCCcccCCHHHHHHHHHHcCCeEEE
Confidence 0001245667777888887653
No 113
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.06 E-value=5e-10 Score=98.49 Aligned_cols=105 Identities=17% Similarity=0.079 Sum_probs=77.0
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
...+..+|||||||+|..+..+++. .++..+++++|.++.+.+.+++. +...+.. .
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~v~~vD~~~~~~~~a~~~-------------------~~~~~~~-~- 129 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEI---VGEDGLVVSIERIPELAEKAERT-------------------LRKLGYD-N- 129 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH---HCTTSEEEEEESCHHHHHHHHHH-------------------HHHHTCT-T-
T ss_pred CCCCCCEEEEECCCccHHHHHHHHH---hCCCCEEEEEeCCHHHHHHHHHH-------------------HHHcCCC-C-
Confidence 3345679999999999999999986 34568999999999988877653 2222221 1
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+.+..++..+.++. ..+||+|+++.....-. +.+.+.|+|||++++.-.
T Consensus 130 --v~~~~~d~~~~~~~-~~~fD~v~~~~~~~~~~-----~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 130 --VIVIVGDGTLGYEP-LAPYDRIYTTAAGPKIP-----EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp --EEEEESCGGGCCGG-GCCEEEEEESSBBSSCC-----HHHHHTEEEEEEEEEEES
T ss_pred --eEEEECCcccCCCC-CCCeeEEEECCchHHHH-----HHHHHHcCCCcEEEEEEC
Confidence 77777877554332 46899999987654333 588999999999988643
No 114
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.06 E-value=2.4e-10 Score=105.64 Aligned_cols=109 Identities=17% Similarity=0.102 Sum_probs=83.6
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
...++.+|||||||+|..+..+++. ++.+.+|+++|+++.+.+.+++. +...+.
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~~~~v~gvD~s~~~~~~a~~~-------------------~~~~~~---- 72 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPL---LPEGSKYTGIDSGETLLAEAREL-------------------FRLLPY---- 72 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTT---SCTTCEEEEEESCHHHHHHHHHH-------------------HHSSSS----
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHHH-------------------HHhcCC----
Confidence 3346789999999999999999884 45468999999999988877653 221111
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
.+.+..+|..+ ++. +++||+|+.... +........++.+.+.|+|||++++.+..
T Consensus 73 -~v~~~~~d~~~-~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 73 -DSEFLEGDATE-IEL-NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -EEEEEESCTTT-CCC-SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -ceEEEEcchhh-cCc-CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 28888888776 332 568999998765 33355668899999999999999988876
No 115
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.06 E-value=7.6e-10 Score=99.66 Aligned_cols=124 Identities=16% Similarity=0.142 Sum_probs=88.8
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh-ccCCc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ-NAIDS 230 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~-g~~~~ 230 (327)
...+..+|||+|||+|..++.+++. +++.++++++|.++.+.+.+++ ++... + .++
T Consensus 93 ~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~v~~~D~~~~~~~~a~~-------------------~~~~~~g-~~~ 149 (258)
T 2pwy_A 93 DLAPGMRVLEAGTGSGGLTLFLARA---VGEKGLVESYEARPHHLAQAER-------------------NVRAFWQ-VEN 149 (258)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH---HCTTSEEEEEESCHHHHHHHHH-------------------HHHHHCC-CCC
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHH---hCCCCEEEEEeCCHHHHHHHHH-------------------HHHHhcC-CCC
Confidence 3345679999999999999999985 4668899999999998887766 33222 3 223
Q ss_pred ccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCC
Q 041517 231 VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGL 310 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl 310 (327)
+.+..++..+. +..++.||+|++|... ....++.+.+.|+|||++++..... ..+.+.++.+ ++.|+
T Consensus 150 ---v~~~~~d~~~~-~~~~~~~D~v~~~~~~----~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~l-~~~gf 216 (258)
T 2pwy_A 150 ---VRFHLGKLEEA-ELEEAAYDGVALDLME----PWKVLEKAALALKPDRFLVAYLPNI----TQVLELVRAA-EAHPF 216 (258)
T ss_dssp ---EEEEESCGGGC-CCCTTCEEEEEEESSC----GGGGHHHHHHHEEEEEEEEEEESCH----HHHHHHHHHH-TTTTE
T ss_pred ---EEEEECchhhc-CCCCCCcCEEEECCcC----HHHHHHHHHHhCCCCCEEEEEeCCH----HHHHHHHHHH-HHCCC
Confidence 78888887664 1113689999997543 3467899999999999998866432 3455555554 34665
Q ss_pred e
Q 041517 311 K 311 (327)
Q Consensus 311 ~ 311 (327)
.
T Consensus 217 ~ 217 (258)
T 2pwy_A 217 R 217 (258)
T ss_dssp E
T ss_pred c
Confidence 5
No 116
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.06 E-value=4.6e-10 Score=98.10 Aligned_cols=111 Identities=16% Similarity=0.062 Sum_probs=82.4
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.++..+....+..+|||||||+|..+..+++. +.+++++|+++.+.+.+++.
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~s~~~~~~a~~~---------------------- 87 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGL------ADRVTALDGSAEMIAEAGRH---------------------- 87 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHGGG----------------------
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHhc----------------------
Confidence 45555544445679999999999999999985 67999999999888766541
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC-Cc--HHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF-NS--AWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~~--v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+. .+ +.+..++..+. ..+++||+|+......+ +. ....++.+.+.|+|||++++.+...
T Consensus 88 -~~-~~---~~~~~~d~~~~--~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 88 -GL-DN---VEFRQQDLFDW--TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp -CC-TT---EEEEECCTTSC--CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -CC-CC---eEEEecccccC--CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 11 11 77788887664 23579999998764322 22 2677999999999999999987754
No 117
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.05 E-value=3.9e-10 Score=100.31 Aligned_cols=103 Identities=18% Similarity=0.094 Sum_probs=75.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|..++.+++. +++.++|+++|.++.+.+.++++ .... .+ +
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~---~~~~~~v~~vD~s~~~~~~~~~~-------------------~~~~---~~---v 124 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDI---VGWEGKIFGIEFSPRVLRELVPI-------------------VEER---RN---I 124 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHH---HCTTSEEEEEESCHHHHHHHHHH-------------------HSSC---TT---E
T ss_pred CCCEEEEEeccCCHHHHHHHHH---hCCCeEEEEEECCHHHHHHHHHH-------------------Hhcc---CC---C
Confidence 3579999999999999999985 45578999999998877655442 2111 12 7
Q ss_pred Eeeecchhhh--hhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 235 PFSSGSALTK--LCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 235 ~~~~gda~~~--L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
.+..++..+. +..+...||+|+.|..... .....++.+.+.|+|||++++.
T Consensus 125 ~~~~~d~~~~~~~~~~~~~~D~v~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 125 VPILGDATKPEEYRALVPKVDVIFEDVAQPT-QAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEECCTTCGGGGTTTCCCEEEEEECCCSTT-HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEccCCCcchhhcccCCceEEEECCCCHh-HHHHHHHHHHHhcCCCCEEEEE
Confidence 7778877652 2233568999999976422 2223389999999999988886
No 118
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.05 E-value=6.4e-10 Score=101.47 Aligned_cols=107 Identities=19% Similarity=0.091 Sum_probs=81.2
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .++.+++++|+++.+.+.+++. +...+.. + +
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~----~~~~~v~~vD~s~~~~~~a~~~-------------------~~~~~~~-~---~ 89 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKN----NPDAEITSIDISPESLEKAREN-------------------TEKNGIK-N---V 89 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHH----CTTSEEEEEESCHHHHHHHHHH-------------------HHHTTCC-S---E
T ss_pred CCCeEEEecCCCCHHHHHHHHh----CCCCEEEEEECCHHHHHHHHHH-------------------HHHcCCC-C---c
Confidence 4679999999999999999984 4578999999999988877652 2222221 2 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCC-CCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGH-DFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h-~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
.+..++..+ ++..+++||+|+..... ..+.....++.+.++|+|||++++.+..
T Consensus 90 ~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 90 KFLQANIFS-LPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp EEEECCGGG-CCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEccccc-CCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 888888765 33335799999987542 2345568899999999999999987643
No 119
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.05 E-value=7.8e-10 Score=101.26 Aligned_cols=125 Identities=16% Similarity=0.117 Sum_probs=89.4
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh-c-cCC
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ-N-AID 229 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~-g-~~~ 229 (327)
...+..+|||+|||+|..+..+++. +++.++++++|.++.+.+.++++ +... + +.+
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~v~~vD~~~~~~~~a~~~-------------------~~~~~g~~~~ 153 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRA---VGPAGQVISYEQRADHAEHARRN-------------------VSGCYGQPPD 153 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH---HCTTSEEEEECSCHHHHHHHHHH-------------------HHHHHTSCCT
T ss_pred CCCCCCEEEEEcccccHHHHHHHHH---hCCCCEEEEEeCCHHHHHHHHHH-------------------HHHhcCCCCC
Confidence 3345679999999999999999985 46688999999999988877663 3222 2 122
Q ss_pred cccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcC
Q 041517 230 SVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKING 309 (327)
Q Consensus 230 ~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~g 309 (327)
+ +.+..+|..+. +..++.||+|++|... .+..++.+.+.|+|||++++..... ..+.+.++.+.+..+
T Consensus 154 ~---v~~~~~d~~~~-~~~~~~~D~v~~~~~~----~~~~l~~~~~~L~pgG~l~~~~~~~----~~~~~~~~~l~~~~~ 221 (280)
T 1i9g_A 154 N---WRLVVSDLADS-ELPDGSVDRAVLDMLA----PWEVLDAVSRLLVAGGVLMVYVATV----TQLSRIVEALRAKQC 221 (280)
T ss_dssp T---EEEECSCGGGC-CCCTTCEEEEEEESSC----GGGGHHHHHHHEEEEEEEEEEESSH----HHHHHHHHHHHHHSS
T ss_pred c---EEEEECchHhc-CCCCCceeEEEECCcC----HHHHHHHHHHhCCCCCEEEEEeCCH----HHHHHHHHHHHhcCC
Confidence 3 78888887664 2124689999997653 3478899999999999998865432 345566665554344
Q ss_pred C
Q 041517 310 L 310 (327)
Q Consensus 310 l 310 (327)
+
T Consensus 222 f 222 (280)
T 1i9g_A 222 W 222 (280)
T ss_dssp B
T ss_pred c
Confidence 3
No 120
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.04 E-value=6.3e-10 Score=98.71 Aligned_cols=113 Identities=17% Similarity=0.120 Sum_probs=79.8
Q ss_pred HHHHHHHh-hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 145 AVFGNLID-KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 145 ~lL~~L~~-~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
.++..+.. ..+..+|||||||+|..+..+++. .++.++|+++|+++.+.+.++++. .
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~---~~~~~~v~~vD~s~~~~~~a~~~~-------------------~ 123 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARM---VGCTGKVIGIDHIKELVDDSVNNV-------------------R 123 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHH---HCTTCEEEEEESCHHHHHHHHHHH-------------------H
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHH---hCCCcEEEEEeCCHHHHHHHHHHH-------------------H
Confidence 34454432 224579999999999999999985 355689999999999888776532 2
Q ss_pred hhcc----CCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 224 YQNA----IDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 224 ~~g~----~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
..+. .++ +.+..++..+... ...+||+|++++.... .++.+.+.|+|||++++.-.
T Consensus 124 ~~~~~~~~~~~---v~~~~~d~~~~~~-~~~~fD~i~~~~~~~~-----~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 124 KDDPTLLSSGR---VQLVVGDGRMGYA-EEAPYDAIHVGAAAPV-----VPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp HHCTHHHHTSS---EEEEESCGGGCCG-GGCCEEEEEECSBBSS-----CCHHHHHTEEEEEEEEEEES
T ss_pred hhcccccCCCc---EEEEECCcccCcc-cCCCcCEEEECCchHH-----HHHHHHHhcCCCcEEEEEEe
Confidence 1111 112 7788887765322 2468999999976432 23788999999999998644
No 121
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.04 E-value=5.4e-10 Score=99.60 Aligned_cols=102 Identities=15% Similarity=-0.006 Sum_probs=70.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .+ .++|+++|+++.+.+...+ +... . .. +
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~---~~-~~~V~gvD~s~~~l~~~~~-------------------~a~~--~-~~---v 107 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADI---VD-EGIIYAVEYSAKPFEKLLE-------------------LVRE--R-NN---I 107 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHH---TT-TSEEEEECCCHHHHHHHHH-------------------HHHH--C-SS---E
T ss_pred CCCEEEEECCcCCHHHHHHHHH---cC-CCEEEEEECCHHHHHHHHH-------------------HHhc--C-CC---e
Confidence 3569999999999999999985 44 6899999999876543222 1110 0 11 5
Q ss_pred Eeeecchhhhh--hhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 235 PFSSGSALTKL--CEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 235 ~~~~gda~~~L--~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
.+..+|+.+.. ..+.++||+|+.|..+. ......++++.+.|+|||.+++.
T Consensus 108 ~~~~~d~~~~~~~~~~~~~fD~V~~~~~~~-~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 108 IPLLFDASKPWKYSGIVEKVDLIYQDIAQK-NQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEECSCTTCGGGTTTTCCCEEEEEECCCST-THHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCCCCchhhcccccceeEEEEeccCh-hHHHHHHHHHHHHhCCCCEEEEE
Confidence 56666655421 11247899999996543 22223489999999999999886
No 122
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.04 E-value=1.4e-09 Score=109.09 Aligned_cols=136 Identities=13% Similarity=0.068 Sum_probs=95.3
Q ss_pred HHHHHHhhc--CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 146 VFGNLIDKV--RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 146 lL~~L~~~~--~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
++..++... ...+|||+|||.|..|+.+|+. ++..++|+++|+++.+.+.+++ |+.
T Consensus 106 l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~---~~~~g~V~avDis~~~l~~~~~-------------------n~~ 163 (479)
T 2frx_A 106 LPVAALFADGNAPQRVMDVAAAPGSKTTQISAR---MNNEGAILANEFSASRVKVLHA-------------------NIS 163 (479)
T ss_dssp HHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHH---TTTCSEEEEECSSHHHHHHHHH-------------------HHH
T ss_pred HHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHH-------------------HHH
Confidence 444444444 5679999999999999999996 4557899999999988877765 454
Q ss_pred hhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCC-------c----------------HHHHHHHHHccCCCC
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFN-------S----------------AWADINRAWRILRPG 280 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~-------~----------------v~~dl~~~~~lL~pG 280 (327)
..|.. . |.+..+|+.+......+.||.|++|+..... . ....++.+.++|+||
T Consensus 164 r~g~~-n---v~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 239 (479)
T 2frx_A 164 RCGIS-N---VALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPG 239 (479)
T ss_dssp HHTCC-S---EEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred HcCCC-c---EEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 44542 2 7788888776433346789999999643211 0 134688899999999
Q ss_pred eEEEEEcCCCCCCchhHHHHHHHHHHHcC
Q 041517 281 GVIFGHDYFTAADNRGVRRAVNLFAKING 309 (327)
Q Consensus 281 GvIi~dD~~~~~~~~GV~~Av~~f~~~~g 309 (327)
|+|++..+...+. .-.+.|+.|.+.++
T Consensus 240 G~LvysTcs~~~~--Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 240 GTLVYSTCTLNQE--ENEAVCLWLKETYP 266 (479)
T ss_dssp EEEEEEESCCSST--TTHHHHHHHHHHST
T ss_pred CEEEEecccCCcc--cCHHHHHHHHHHCC
Confidence 9999998876432 11234555555554
No 123
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.04 E-value=1.3e-09 Score=97.06 Aligned_cols=136 Identities=15% Similarity=0.040 Sum_probs=95.2
Q ss_pred HHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 146 VFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 146 lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
++..+.+.. +..+|||||||+|..+..+++. +.+++++|+++.+.+.+++...
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~-------------------- 96 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT------GYKAVGVDISEVMIQKGKERGE-------------------- 96 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHTTTC--------------------
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc------CCeEEEEECCHHHHHHHHhhcc--------------------
Confidence 444444444 4679999999999999999984 6799999999988877665210
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCch--------
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDYFTAADNR-------- 295 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~-------- 295 (327)
..+ +.+..++..+ ++..+++||+|+.... |..+.....++.+.+.|+|||++++.+........
T Consensus 97 ---~~~---~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~ 169 (242)
T 3l8d_A 97 ---GPD---LSFIKGDLSS-LPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLY 169 (242)
T ss_dssp ---BTT---EEEEECBTTB-CSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGG
T ss_pred ---cCC---ceEEEcchhc-CCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhc
Confidence 111 7777777665 2333579999997643 33456678899999999999999988754311000
Q ss_pred --------hHHHHHHHHHHHcCCeEEE
Q 041517 296 --------GVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 296 --------GV~~Av~~f~~~~gl~v~~ 314 (327)
--...+..++...|+++..
T Consensus 170 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 170 GKDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp TCCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred cccccccCCCHHHHHHHHHHcCCEEEE
Confidence 0124567777888988654
No 124
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.03 E-value=7.5e-10 Score=101.61 Aligned_cols=108 Identities=15% Similarity=0.061 Sum_probs=80.0
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..+ ...++.+|||||||+|..+..+++ ++.+|+++|+++.+.+.+++..
T Consensus 49 l~~~l-~~~~~~~vLDiGcG~G~~~~~l~~------~~~~v~gvD~s~~~~~~a~~~~---------------------- 99 (279)
T 3ccf_A 49 LLQLL-NPQPGEFILDLGCGTGQLTEKIAQ------SGAEVLGTDNAATMIEKARQNY---------------------- 99 (279)
T ss_dssp HHHHH-CCCTTCEEEEETCTTSHHHHHHHH------TTCEEEEEESCHHHHHHHHHHC----------------------
T ss_pred HHHHh-CCCCCCEEEEecCCCCHHHHHHHh------CCCeEEEEECCHHHHHHHHhhC----------------------
Confidence 44433 334568999999999999999987 2789999999998887765421
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCC-CCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGH-DFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h-~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+ +.+..++..+ ++. +++||+|+..... ........++++.+.|+|||++++.....
T Consensus 100 ---~~---~~~~~~d~~~-~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 100 ---PH---LHFDVADARN-FRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp ---TT---SCEEECCTTT-CCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ---CC---CEEEECChhh-CCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 11 5566676655 332 5789999987543 23556688999999999999999876654
No 125
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.03 E-value=3.6e-09 Score=97.39 Aligned_cols=135 Identities=17% Similarity=0.204 Sum_probs=94.0
Q ss_pred hHHHHHHHHHhhc--CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHH
Q 041517 142 SYGAVFGNLIDKV--RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFL 219 (327)
Q Consensus 142 ~~g~lL~~L~~~~--~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl 219 (327)
++..++..+++.. ++.+|||||||+|..++.++.. . ++.+++++|+++.+.+.+++
T Consensus 94 ~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~---~-~~~~v~~vD~s~~~l~~a~~------------------ 151 (276)
T 2b3t_A 94 DTECLVEQALARLPEQPCRILDLGTGTGAIALALASE---R-PDCEIIAVDRMPDAVSLAQR------------------ 151 (276)
T ss_dssp THHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHH---C-TTSEEEEECSSHHHHHHHHH------------------
T ss_pred hHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHh---C-CCCEEEEEECCHHHHHHHHH------------------
Confidence 3445666665553 4679999999999999999974 2 47899999999999988876
Q ss_pred HHHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCC-------------C-------------CcHHHHHHHH
Q 041517 220 QNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHD-------------F-------------NSAWADINRA 273 (327)
Q Consensus 220 ~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~-------------~-------------~~v~~dl~~~ 273 (327)
|+...+.. + +.+..++..+.++ .++||+|+.+.... + ......++.+
T Consensus 152 -n~~~~~~~-~---v~~~~~d~~~~~~--~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~ 224 (276)
T 2b3t_A 152 -NAQHLAIK-N---IHILQSDWFSALA--GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQS 224 (276)
T ss_dssp -HHHHHTCC-S---EEEECCSTTGGGT--TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHH
T ss_pred -HHHHcCCC-c---eEEEEcchhhhcc--cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHH
Confidence 33333332 2 8888888776543 46899999973110 0 1234567889
Q ss_pred HccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCe
Q 041517 274 WRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLK 311 (327)
Q Consensus 274 ~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~ 311 (327)
.++|+|||++++..... -.+.+.++++..|++
T Consensus 225 ~~~LkpgG~l~~~~~~~------~~~~~~~~l~~~Gf~ 256 (276)
T 2b3t_A 225 RNALVSGGFLLLEHGWQ------QGEAVRQAFILAGYH 256 (276)
T ss_dssp GGGEEEEEEEEEECCSS------CHHHHHHHHHHTTCT
T ss_pred HHhcCCCCEEEEEECch------HHHHHHHHHHHCCCc
Confidence 99999999999864433 134455566666664
No 126
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.03 E-value=1.4e-09 Score=105.31 Aligned_cols=138 Identities=14% Similarity=0.159 Sum_probs=96.3
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh-c-cC-Cc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ-N-AI-DS 230 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~-g-~~-~~ 230 (327)
.++.+|||||||+|..+..+++. .+++.+|+++|+++.+.+.++++.. .+.... | .. .+
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~---~~~~~~v~gvD~s~~~l~~a~~~~~---------------~~~~~~~g~~~~~~ 143 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKL---VGEHGKVIGVDMLDNQLEVARKYVE---------------YHAEKFFGSPSRSN 143 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHH---HTTTCEEEEEECCHHHHHHHHHTHH---------------HHHHHHHSSTTCCC
T ss_pred CCCCEEEEecCccCHHHHHHHHH---hCCCCEEEEEECCHHHHHHHHHHHH---------------HhhhhcccccCCCc
Confidence 35789999999999999999985 4567899999999999988876421 010000 1 10 12
Q ss_pred ccceEeeecchhhhh-----hhcCCcEeEEEEcCCCC-CCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchh--------
Q 041517 231 VLPVPFSSGSALTKL-----CEWGVVGDLIEIDAGHD-FNSAWADINRAWRILRPGGVIFGHDYFTAADNRG-------- 296 (327)
Q Consensus 231 v~~V~~~~gda~~~L-----~~l~~~fDLIfIDa~h~-~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~G-------- 296 (327)
+.+..++..+.. +..+++||+|+...... .+.....++++.++|+|||++++.++......+.
T Consensus 144 ---v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~ 220 (383)
T 4fsd_A 144 ---VRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPIL 220 (383)
T ss_dssp ---EEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHH
T ss_pred ---eEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHH
Confidence 888888876531 22247899999876432 3456788999999999999999988765322111
Q ss_pred ---------HHHHHHHHHHHcCCeE
Q 041517 297 ---------VRRAVNLFAKINGLKV 312 (327)
Q Consensus 297 ---------V~~Av~~f~~~~gl~v 312 (327)
-.+.+..+++..|+++
T Consensus 221 ~~~~~~~~~~~~~~~~ll~~aGF~~ 245 (383)
T 4fsd_A 221 YGECLGGALYLEDFRRLVAEAGFRD 245 (383)
T ss_dssp HHTTCTTCCBHHHHHHHHHHTTCCC
T ss_pred hhcccccCCCHHHHHHHHHHCCCce
Confidence 1155666777888863
No 127
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.03 E-value=6.8e-11 Score=106.04 Aligned_cols=112 Identities=14% Similarity=0.124 Sum_probs=81.8
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..+....+..+|||+|||+|..++.+++. +.+|+++|+++.+.+.+++ |+...
T Consensus 69 l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~-------------------~~~~~ 123 (241)
T 3gdh_A 69 IAGRVSQSFKCDVVVDAFCGVGGNTIQFALT------GMRVIAIDIDPVKIALARN-------------------NAEVY 123 (241)
T ss_dssp HHHHHHHHSCCSEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHH-------------------HHHHT
T ss_pred HHHHhhhccCCCEEEECccccCHHHHHHHHc------CCEEEEEECCHHHHHHHHH-------------------HHHHc
Confidence 3444444447889999999999999999984 5899999999999888776 33333
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCc-HHHHHHHHHccCCCCeEEEEEc
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNS-AWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~-v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+..++ +.+..+|..+..+ +.+||+|+.|....... ....+..+.++|+|||+++++.
T Consensus 124 ~~~~~---~~~~~~d~~~~~~--~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 124 GIADK---IEFICGDFLLLAS--FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp TCGGG---EEEEESCHHHHGG--GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCCcC---eEEEECChHHhcc--cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 43233 8899999887542 47899999986543322 1124556788999999977765
No 128
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.03 E-value=6e-10 Score=97.68 Aligned_cols=131 Identities=15% Similarity=0.083 Sum_probs=89.8
Q ss_pred HHHHHHhhcC-CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 146 VFGNLIDKVR-PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 146 lL~~L~~~~~-p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.+..++...+ ..+|||||||+|..+..+++. +.+++++|+++.+.+.+++. .
T Consensus 33 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~-------------------~-- 85 (211)
T 3e23_A 33 TLTKFLGELPAGAKILELGCGAGYQAEAMLAA------GFDVDATDGSPELAAEASRR-------------------L-- 85 (211)
T ss_dssp HHHHHHTTSCTTCEEEESSCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHH-------------------H--
T ss_pred HHHHHHHhcCCCCcEEEECCCCCHHHHHHHHc------CCeEEEECCCHHHHHHHHHh-------------------c--
Confidence 3444444444 679999999999999999984 67999999999888766552 1
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC-C--cHHHHHHHHHccCCCCeEEEEEcCCCCCCch------
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF-N--SAWADINRAWRILRPGGVIFGHDYFTAADNR------ 295 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~--~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~------ 295 (327)
+ +.+..++..+ ++ .+++||+|+......+ . .....++.+.+.|+|||++++..........
T Consensus 86 -~-------~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 155 (211)
T 3e23_A 86 -G-------RPVRTMLFHQ-LD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARY 155 (211)
T ss_dssp -T-------SCCEECCGGG-CC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCE
T ss_pred -C-------CceEEeeecc-CC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchh
Confidence 1 3444555444 23 4689999998754322 2 4567899999999999999987544311000
Q ss_pred ---hHHHHHHHHHHHcC-CeEE
Q 041517 296 ---GVRRAVNLFAKING-LKVQ 313 (327)
Q Consensus 296 ---GV~~Av~~f~~~~g-l~v~ 313 (327)
--.+.+..+++..| +++.
T Consensus 156 ~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 156 YNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp ECCCCHHHHHHHHHHHCCCSEE
T ss_pred ccCCCHHHHHHHHHhCCCcEEE
Confidence 03456666777788 7754
No 129
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.02 E-value=1.4e-10 Score=108.28 Aligned_cols=109 Identities=14% Similarity=0.031 Sum_probs=81.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..++.+|.. ..++.+|+++|+++.+.+.+++ ++...+..++ +
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~---~~~~~~v~gvD~s~~~~~~a~~-------------------~~~~~~~~~~---v 172 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYS---ACPGVQLVGIDYDPEALDGATR-------------------LAAGHALAGQ---I 172 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCT---TCTTCEEEEEESCHHHHHHHHH-------------------HHTTSTTGGG---E
T ss_pred CCCEEEEecCCCCHHHHHHHHh---cCCCCeEEEEECCHHHHHHHHH-------------------HHHhcCCCCc---e
Confidence 4679999999999999998742 3558899999999999888776 3333344334 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCC-CcHH---HHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDF-NSAW---ADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~~v~---~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
++..++..+. +. .++||+|+......+ +... ..++.+.+.|+|||++++.++..
T Consensus 173 ~~~~~d~~~~-~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 173 TLHRQDAWKL-DT-REGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEECCGGGC-CC-CSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred EEEECchhcC-Cc-cCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 8888988773 32 388999998653222 2222 36899999999999999998654
No 130
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.02 E-value=8.1e-10 Score=101.49 Aligned_cols=115 Identities=7% Similarity=-0.229 Sum_probs=75.1
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh-hcc---CCc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY-QNA---IDS 230 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~-~g~---~~~ 230 (327)
+..+|||+|||+|..+.+||+. +.+|++||+++.+.+.|++........ .++.. .+. ...
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~------G~~V~gvD~S~~~i~~a~~~~~~~~~~----------~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR------GHTVVGVEISEIGIREFFAEQNLSYTE----------EPLAEIAGAKVFKSS 131 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT------TCEEEEECSCHHHHHHHHHHTTCCEEE----------EECTTSTTCEEEEET
T ss_pred CCCeEEEeCCCCcHHHHHHHHC------CCeEEEEECCHHHHHHHHHhccccccc----------ccccccccccccccC
Confidence 5789999999999999999984 669999999999998775422100000 00000 000 000
Q ss_pred ccceEeeecchhhhhhhcCCcEeEEEEcCCCC---CCcHHHHHHHHHccCCCCeEEEE
Q 041517 231 VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHD---FNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~---~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
...|.+..+|..+.-....++||+|+.-+... .+.....++.+.++|+|||++++
T Consensus 132 ~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 132 SGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp TSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred CCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 01288889988764222237899999654321 22344689999999999999864
No 131
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.02 E-value=1.2e-09 Score=100.44 Aligned_cols=109 Identities=13% Similarity=0.012 Sum_probs=80.5
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..+ ...++.+|||||||+|..+..+++. +.+|+++|+++.+.+.+++. +...
T Consensus 112 ~~~~~-~~~~~~~vLD~GcG~G~~~~~l~~~------g~~v~~vD~s~~~~~~a~~~-------------------~~~~ 165 (286)
T 3m70_A 112 VVDAA-KIISPCKVLDLGCGQGRNSLYLSLL------GYDVTSWDHNENSIAFLNET-------------------KEKE 165 (286)
T ss_dssp HHHHH-HHSCSCEEEEESCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHH-------------------HHHT
T ss_pred HHHHh-hccCCCcEEEECCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHH-------------------HHHc
Confidence 44443 3447899999999999999999984 56999999999988877652 2222
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCC---CCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHD---FNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~---~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+. .+.+..++..+... +++||+|+...... .+.....++.+.++|+|||++++-.
T Consensus 166 ~~-----~~~~~~~d~~~~~~--~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 166 NL-----NISTALYDINAANI--QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp TC-----CEEEEECCGGGCCC--CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CC-----ceEEEEeccccccc--cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 32 27888888766322 68899999876432 2335578999999999999865533
No 132
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.01 E-value=1.5e-09 Score=107.49 Aligned_cols=142 Identities=17% Similarity=0.146 Sum_probs=97.9
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.++..++...+..+|||+|||.|..+..+++. ++..++|+++|+++.+.+.+++ |+..
T Consensus 249 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~---~~~~~~v~a~D~s~~~l~~~~~-------------------~~~~ 306 (450)
T 2yxl_A 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAEL---MKNKGKIYAFDVDKMRMKRLKD-------------------FVKR 306 (450)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHH---TTTCSEEEEECSCHHHHHHHHH-------------------HHHH
T ss_pred HHHHHhcCCCCcCEEEEeCCCccHHHHHHHHH---cCCCCEEEEEcCCHHHHHHHHH-------------------HHHH
Confidence 44455555545679999999999999999986 3435899999999988776655 4444
Q ss_pred hccCCcccceEeeecchhhhhhhcC-CcEeEEEEcCCCCCCcH-----------------------HHHHHHHHccCCCC
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWG-VVGDLIEIDAGHDFNSA-----------------------WADINRAWRILRPG 280 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~-~~fDLIfIDa~h~~~~v-----------------------~~dl~~~~~lL~pG 280 (327)
.|.. . +.+..+|+.+....+. ++||+|++|+......+ ...++.+.++|+||
T Consensus 307 ~g~~-~---v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 382 (450)
T 2yxl_A 307 MGIK-I---VKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG 382 (450)
T ss_dssp TTCC-S---EEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred cCCC-c---EEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4432 2 7777888766422233 68999999964322111 45689999999999
Q ss_pred eEEEEEcCCCCCCchhHHHHHHHHHHHc-CCeEEE
Q 041517 281 GVIFGHDYFTAADNRGVRRAVNLFAKIN-GLKVQI 314 (327)
Q Consensus 281 GvIi~dD~~~~~~~~GV~~Av~~f~~~~-gl~v~~ 314 (327)
|++++.++...+ ..-.+.+..|.+.+ ++++.+
T Consensus 383 G~lvy~tcs~~~--~ene~~v~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 383 GRLLYTTCSIFK--EENEKNIRWFLNVHPEFKLVP 415 (450)
T ss_dssp EEEEEEESCCCG--GGTHHHHHHHHHHCSSCEECC
T ss_pred cEEEEEeCCCCh--hhHHHHHHHHHHhCCCCEEee
Confidence 999999887632 11234556666665 566544
No 133
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.01 E-value=1.6e-09 Score=101.23 Aligned_cols=115 Identities=10% Similarity=0.020 Sum_probs=85.4
Q ss_pred HHHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 145 AVFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 145 ~lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
..+..+++.. +..+|||||||+|..+..+++.. +.+|+++|+++.+.+.+++ +
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~-------------------~ 132 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF-----DVNVIGLTLSKNQHARCEQ-------------------V 132 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC-----CCEEEEEECCHHHHHHHHH-------------------H
Confidence 3455555543 35699999999999999999852 4699999999998887765 3
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC---CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF---NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~---~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+...+..++ +.+..++..+. +++||+|+......+ +.....++.+.++|+|||++++.++..
T Consensus 133 ~~~~~~~~~---v~~~~~d~~~~----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 133 LASIDTNRS---RQVLLQGWEDF----AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp HHTSCCSSC---EEEEESCGGGC----CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred HHhcCCCCc---eEEEECChHHC----CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 333344334 77888876542 378999997644222 345678999999999999999988875
No 134
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.01 E-value=4.7e-10 Score=101.79 Aligned_cols=108 Identities=10% Similarity=0.045 Sum_probs=79.1
Q ss_pred HHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 146 VFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 146 lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
++..+.+.. ++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++.. .
T Consensus 40 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~-------------------~- 93 (263)
T 3pfg_A 40 LAALVRRHSPKAASLLDVACGTGMHLRHLADS------FGTVEGLELSADMLAIARRRN-------------------P- 93 (263)
T ss_dssp HHHHHHHHCTTCCEEEEETCTTSHHHHHHTTT------SSEEEEEESCHHHHHHHHHHC-------------------T-
T ss_pred HHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHc------CCeEEEEECCHHHHHHHHhhC-------------------C-
Confidence 344444333 3589999999999999999874 568999999998887776521 1
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcC-CCCC----CcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDA-GHDF----NSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa-~h~~----~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+ +.+..++..+. +. +++||+|++.. ...+ ......++.+.+.|+|||+++++++.
T Consensus 94 -----~---~~~~~~d~~~~-~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 94 -----D---AVLHHGDMRDF-SL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp -----T---SEEEECCTTTC-CC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred -----C---CEEEECChHHC-Cc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 1 67777776652 22 68999999875 2222 24456789999999999999998754
No 135
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.01 E-value=1.6e-09 Score=100.45 Aligned_cols=152 Identities=13% Similarity=-0.010 Sum_probs=87.7
Q ss_pred CCchHHHHHHHHHhh---cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeC-CCCChhhhhhhcccCccccchHH
Q 041517 139 GWGSYGAVFGNLIDK---VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDD-FRGWPGFRDKFKEIPMVNGNVLL 214 (327)
Q Consensus 139 gw~~~g~lL~~L~~~---~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~-~~~~~~~A~~~~~~~~~~g~~~~ 214 (327)
-|+....+...+.+. .+.++|||||||+|..++.+++. + ..+|+++|. ++.+.+.++++...
T Consensus 60 ~~~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~----~-~~~v~~~D~s~~~~~~~a~~n~~~--------- 125 (281)
T 3bzb_A 60 VWSGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA----G-ADQVVATDYPDPEILNSLESNIRE--------- 125 (281)
T ss_dssp --CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT----T-CSEEEEEECSCHHHHHHHHHHHHT---------
T ss_pred eecHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc----C-CCEEEEEeCCCHHHHHHHHHHHHH---------
Confidence 344444455555443 35679999999999999998873 2 359999999 89998888774310
Q ss_pred HHHHHHHH-hhhccC----CcccceEee---ecchhhhhhh--cCCcEeEEEE-cCCCCCCcHHHHHHHHHccCC---C-
Q 041517 215 YFQFLQNV-IYQNAI----DSVLPVPFS---SGSALTKLCE--WGVVGDLIEI-DAGHDFNSAWADINRAWRILR---P- 279 (327)
Q Consensus 215 ~~~Fl~nv-~~~g~~----~~v~~V~~~---~gda~~~L~~--l~~~fDLIfI-Da~h~~~~v~~dl~~~~~lL~---p- 279 (327)
|. ...+.. ++ +.+. .++..+.+.. .+.+||+|+. |.-+........++.+.++|+ |
T Consensus 126 ------N~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~ 196 (281)
T 3bzb_A 126 ------HTANSCSSETVKRAS---PKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPAND 196 (281)
T ss_dssp ------TCC----------CC---CEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTC
T ss_pred ------hhhhhcccccCCCCC---eEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCC
Confidence 00 111111 12 4443 3332332321 2478999986 776655556678899999999 9
Q ss_pred -CeEEEEE-cCCCCCCchhHHHHHHHHHHHcC-CeEEE
Q 041517 280 -GGVIFGH-DYFTAADNRGVRRAVNLFAKING-LKVQI 314 (327)
Q Consensus 280 -GGvIi~d-D~~~~~~~~GV~~Av~~f~~~~g-l~v~~ 314 (327)
||++++- .... +........+.+.+...| +++..
T Consensus 197 ~gG~l~v~~~~~~-~~~~~~~~~~~~~l~~~G~f~v~~ 233 (281)
T 3bzb_A 197 PTAVALVTFTHHR-PHLAERDLAFFRLVNADGALIAEP 233 (281)
T ss_dssp TTCEEEEEECC---------CTHHHHHHHHSTTEEEEE
T ss_pred CCCEEEEEEEeee-cccchhHHHHHHHHHhcCCEEEEE
Confidence 9965442 2211 111111223334556778 76653
No 136
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.01 E-value=1e-09 Score=98.67 Aligned_cols=113 Identities=13% Similarity=0.150 Sum_probs=81.2
Q ss_pred HHHHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHH
Q 041517 144 GAVFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQ 220 (327)
Q Consensus 144 g~lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~ 220 (327)
..++..+++.. ++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~------------------ 82 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER------GYEVVGLDLHEEMLRVARRK------------------ 82 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHH------------------
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHH------------------
Confidence 34555555443 3579999999999999999983 57999999999998877662
Q ss_pred HHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCC---CcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 221 NVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDF---NSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 221 nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~---~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
....+. .+.+..++..+. + ...+||+|++... +.+ +.....++.+.+.|+|||+++++-.
T Consensus 83 -~~~~~~-----~v~~~~~d~~~~-~-~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 83 -AKERNL-----KIEFLQGDVLEI-A-FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp -HHHTTC-----CCEEEESCGGGC-C-CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -HHhcCC-----ceEEEECChhhc-c-cCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 222222 277788887663 2 2468999997532 222 2345678999999999999998643
No 137
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.01 E-value=4.3e-10 Score=104.11 Aligned_cols=99 Identities=13% Similarity=-0.000 Sum_probs=76.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc-CCcccc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA-IDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~-~~~v~~ 233 (327)
.+++|||||||+|..+..+++ . + .+|+++|+++.+.+.++++.. .+. .+. ..+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~----~-~-~~v~~veid~~~i~~ar~~~~----------------~~~-~~~~~~r--- 125 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFK----Y-D-THIDFVQADEKILDSFISFFP----------------HFH-EVKNNKN--- 125 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTT----S-S-CEEEEECSCHHHHGGGTTTST----------------THH-HHHTCTT---
T ss_pred CCCEEEEEeCCcCHHHHHHHh----C-C-CEEEEEECCHHHHHHHHHHHH----------------hhc-cccCCCe---
Confidence 578999999999999988876 3 3 899999999999998887542 110 011 123
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+++..+|+.+.+ ++||+|++|+.. + ...++.+.+.|+|||++++..
T Consensus 126 v~~~~~D~~~~~----~~fD~Ii~d~~d---p-~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 126 FTHAKQLLDLDI----KKYDLIFCLQEP---D-IHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp EEEESSGGGSCC----CCEEEEEESSCC---C-HHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEechHHHHH----hhCCEEEECCCC---h-HHHHHHHHHhcCCCcEEEEEc
Confidence 888888887654 689999999643 2 247999999999999999863
No 138
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.00 E-value=5.2e-10 Score=99.74 Aligned_cols=116 Identities=14% Similarity=0.067 Sum_probs=79.8
Q ss_pred HHHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhcc--CCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 145 AVFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQ--LGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 145 ~lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~--l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++..|.... +..+|||||||+|+.+..+++.+.. ..+.++|+++|.++.+.+.+++..
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~------------------ 134 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANL------------------ 134 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHH------------------
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHH------------------
Confidence 4555554233 3579999999999999999985320 001369999999999888877632
Q ss_pred Hhhhcc----CCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 222 VIYQNA----IDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 222 v~~~g~----~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
...+. ..+ +.+..++..+.++. ..+||+|++++....-. +.+.+.|+|||++++.-.
T Consensus 135 -~~~~~~~~~~~~---v~~~~~d~~~~~~~-~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 135 -NTDDRSMLDSGQ---LLIVEGDGRKGYPP-NAPYNAIHVGAAAPDTP-----TELINQLASGGRLIVPVG 195 (227)
T ss_dssp -HHHHHHHHHHTS---EEEEESCGGGCCGG-GCSEEEEEECSCBSSCC-----HHHHHTEEEEEEEEEEES
T ss_pred -HhcCccccCCCc---eEEEECCcccCCCc-CCCccEEEECCchHHHH-----HHHHHHhcCCCEEEEEEe
Confidence 11110 012 77888887764433 36899999997754322 788999999999988543
No 139
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.00 E-value=7.6e-10 Score=102.39 Aligned_cols=148 Identities=15% Similarity=0.019 Sum_probs=87.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHh---ccCCCC-----cEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh---
Q 041517 155 RPRVIIEVGSFLGASALHMANLT---RQLGLD-----SQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI--- 223 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~---r~l~~~-----~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~--- 223 (327)
++.+|||||+|+|++++.++++. +...++ .++++||.++-..+..++....-. +-.....+.++...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p--~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWP--ELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCG--GGHHHHHHHHHTCCCSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcCh--hHHHHHHHHHHhccccc
Confidence 45799999999999999988864 210332 589999999843221111000000 00001111111100
Q ss_pred ----hhccCCcccceEeeecchhhhhhhcCC----cEeEEEEcCCCC--CCc--HHHHHHHHHccCCCCeEEEEEcCCCC
Q 041517 224 ----YQNAIDSVLPVPFSSGSALTKLCEWGV----VGDLIEIDAGHD--FNS--AWADINRAWRILRPGGVIFGHDYFTA 291 (327)
Q Consensus 224 ----~~g~~~~v~~V~~~~gda~~~L~~l~~----~fDLIfIDa~h~--~~~--v~~dl~~~~~lL~pGGvIi~dD~~~~ 291 (327)
...+.+....+++..||+.+.|+.+.. +||+||+|+... .+. ....++.+.++|+|||+++. |..
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysa- 214 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTS- 214 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCC-
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeC-
Confidence 001111113488899999999988754 799999998543 222 23679999999999999995 332
Q ss_pred CCchhHHHHHHHHHHHcCCeEE
Q 041517 292 ADNRGVRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 292 ~~~~GV~~Av~~f~~~~gl~v~ 313 (327)
..-|++++.+ -|++|.
T Consensus 215 --a~~vrr~L~~----aGF~v~ 230 (257)
T 2qy6_A 215 --AGFVRRGLQE----AGFTMQ 230 (257)
T ss_dssp --BHHHHHHHHH----HTEEEE
T ss_pred --CHHHHHHHHH----CCCEEE
Confidence 1235555544 466655
No 140
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.00 E-value=1.1e-09 Score=96.41 Aligned_cols=113 Identities=12% Similarity=0.096 Sum_probs=80.7
Q ss_pred HHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 146 VFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 146 lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
++..+.+.. +..+|||||||+|..+..+++. ..+++++|+++.+.+.+++. ...
T Consensus 28 ~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~-------------------~~~ 82 (227)
T 1ve3_A 28 LEPLLMKYMKKRGKVLDLACGVGGFSFLLEDY------GFEVVGVDISEDMIRKAREY-------------------AKS 82 (227)
T ss_dssp HHHHHHHSCCSCCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHH-------------------HHH
T ss_pred HHHHHHHhcCCCCeEEEEeccCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHH-------------------HHh
Confidence 444444443 3679999999999999999884 23999999999988877653 221
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC--C-CCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG--H-DFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~--h-~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
.+ .+ +.+..++..+ ++..+++||+|+.... + ........++.+.+.|+|||++++.+..
T Consensus 83 ~~--~~---~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 83 RE--SN---VEFIVGDARK-LSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TT--CC---CEEEECCTTS-CCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cC--CC---ceEEECchhc-CCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 11 12 7777777655 2222468999998765 3 2234456789999999999999987765
No 141
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.00 E-value=1.3e-09 Score=108.04 Aligned_cols=117 Identities=12% Similarity=0.074 Sum_probs=81.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccC-Ccccc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI-DSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~-~~v~~ 233 (327)
+..+|||||||+|+.++.+|+.. + ..+|++||.++.+.+.|+.+.+ .+.+|+...|+. ++
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~---g-~~~V~GVDis~~~l~~A~~Ml~------------~ar~~~~~~Gl~~~n--- 302 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALEC---G-CALSFGCEIMDDASDLTILQYE------------ELKKRCKLYGMRLNN--- 302 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH---C-CSEEEEEECCHHHHHHHHHHHH------------HHHHHHHHTTBCCCC---
T ss_pred CCCEEEEeCCCcCHHHHHHHHHC---C-CCEEEEEeCCHHHHHHHHHhHH------------HHHHHHHHcCCCCCc---
Confidence 46799999999999999999852 2 4689999999998887743221 223355544532 33
Q ss_pred eEeeecchhhh---hhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 234 VPFSSGSALTK---LCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 234 V~~~~gda~~~---L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
|.+..++.... +.....+||+|++....-.+.....++++.+.|+|||.|++.|...
T Consensus 303 V~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 303 VEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp EEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred eEEEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 77777654321 2222368999998633222455567899999999999999987554
No 142
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.99 E-value=1.2e-09 Score=97.13 Aligned_cols=99 Identities=13% Similarity=0.154 Sum_probs=74.9
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.+..+|||||||+|..+..+++. ..+++++|+++.+.+.+++. +...+ +
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~-------------------~~~~~---~--- 117 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEI------VDKVVSVEINEKMYNYASKL-------------------LSYYN---N--- 117 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHHHH-------------------HTTCS---S---
T ss_pred CCCCEEEEEcCCCCHHHHHHHHH------cCEEEEEeCCHHHHHHHHHH-------------------HhhcC---C---
Confidence 34679999999999999999985 37999999999888877652 22222 2
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+.+..++..+.++ .+++||+|+++.....-. +.+.+.|+|||++++....
T Consensus 118 v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~~-----~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 118 IKLILGDGTLGYE-EEKPYDRVVVWATAPTLL-----CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EEEEESCGGGCCG-GGCCEEEEEESSBBSSCC-----HHHHHTEEEEEEEEEEECS
T ss_pred eEEEECCcccccc-cCCCccEEEECCcHHHHH-----HHHHHHcCCCcEEEEEEcC
Confidence 7888888776433 246899999987643332 5788999999999887543
No 143
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.99 E-value=1.9e-09 Score=97.64 Aligned_cols=109 Identities=11% Similarity=0.047 Sum_probs=76.9
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh--hh--ccCCc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI--YQ--NAIDS 230 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~--~~--g~~~~ 230 (327)
+..+|||||||+|..++.+|+. .++.+|++||+++.+.+.++++.. .+-. .. +. .
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~----~~~~~v~gvD~s~~~l~~a~~~~~---------------~~~~~~~~~~~~-~- 107 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPA----FPEDLILGMEIRVQVTNYVEDRII---------------ALRNNTASKHGF-Q- 107 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHH----STTSEEEEEESCHHHHHHHHHHHH---------------HHHHTC-CCSTT-T-
T ss_pred CCCEEEEEcCCCCHHHHHHHHh----CCCCCEEEEEcCHHHHHHHHHHHH---------------HHhhccccccCC-C-
Confidence 4568999999999999999985 457899999999999888766321 0100 00 22 1
Q ss_pred ccceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCc---------HHHHHHHHHccCCCCeEEEEE
Q 041517 231 VLPVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNS---------AWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~---------v~~dl~~~~~lL~pGGvIi~d 286 (327)
.+.+..+|+.+.++.. .+.+|.|++.-.-.+.. ....++.+.++|+|||++++.
T Consensus 108 --nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 108 --NINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp --TEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --cEEEEeccHHHHHHHhccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 2888889887756532 47899998753222110 026889999999999998873
No 144
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.99 E-value=1.1e-09 Score=105.95 Aligned_cols=107 Identities=18% Similarity=0.105 Sum_probs=80.3
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..+.++|||||||+|..++.+++. + ..+|++||.+ .+.+.+++ ++...++.++
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~----g-~~~V~gvD~s-~~~~~a~~-------------------~~~~~~~~~~-- 113 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQA----G-ARKVYAVEAT-KMADHARA-------------------LVKANNLDHI-- 113 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHT----T-CSEEEEEESS-TTHHHHHH-------------------HHHHTTCTTT--
T ss_pred cCCCCEEEEeccCcCHHHHHHHhc----C-CCEEEEEccH-HHHHHHHH-------------------HHHHcCCCCe--
Confidence 345789999999999999999984 2 3499999999 99888766 3444455445
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCC---C-CcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHD---F-NSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~---~-~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
|.+..++..+.. +.++||+|+.+.... + ......++.+.++|+|||+++++...
T Consensus 114 -v~~~~~d~~~~~--~~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 114 -VEVIEGSVEDIS--LPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp -EEEEESCGGGCC--CSSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred -EEEEECchhhcC--cCCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 888899887632 237899999976321 1 22445678888999999999987664
No 145
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.99 E-value=1.3e-09 Score=97.59 Aligned_cols=103 Identities=14% Similarity=0.058 Sum_probs=74.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|..+..+++. .++.++|++||+++.+.+.+.+ +.... .+ +
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~---~g~~~~v~gvD~s~~~i~~~~~-------------------~a~~~---~~---v 128 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDI---VGPDGLVYAVEFSHRSGRDLIN-------------------LAKKR---TN---I 128 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---HCTTCEEEEECCCHHHHHHHHH-------------------HHHHC---TT---E
T ss_pred CCCEEEEEcccCCHHHHHHHHH---hCCCcEEEEEECCHHHHHHHHH-------------------Hhhcc---CC---e
Confidence 3569999999999999999985 4567899999999876543322 11111 12 7
Q ss_pred Eeeecchhhh--hhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 235 PFSSGSALTK--LCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 235 ~~~~gda~~~--L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
.+..++..+. ++..+++||+|+.|... .......++.+.+.|+|||++++.
T Consensus 129 ~~~~~d~~~~~~~~~~~~~~D~V~~~~~~-~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 129 IPVIEDARHPHKYRMLIAMVDVIFADVAQ-PDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp EEECSCTTCGGGGGGGCCCEEEEEECCCC-TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcccCChhhhcccCCcEEEEEEcCCC-ccHHHHHHHHHHHHcCCCeEEEEE
Confidence 7888887663 34446789999998763 222234478899999999999983
No 146
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.99 E-value=8.9e-10 Score=96.14 Aligned_cols=103 Identities=10% Similarity=-0.035 Sum_probs=78.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..++.++.. .++.+++++|+++.+.+.+++ |+...+.. . +
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~----~~~~~v~~vD~s~~~~~~a~~-------------------~~~~~~~~-~---v 117 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIV----RPEAHFTLLDSLGKRVRFLRQ-------------------VQHELKLE-N---I 117 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHH----CTTSEEEEEESCHHHHHHHHH-------------------HHHHTTCS-S---E
T ss_pred CCCeEEEECCCCCHHHHHHHHH----CCCCEEEEEeCCHHHHHHHHH-------------------HHHHcCCC-C---e
Confidence 4689999999999999999985 247899999999998887765 33332321 1 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
.+..++..+.. ..++||+|+..+. ......++.+.+.|+|||++++....
T Consensus 118 ~~~~~d~~~~~--~~~~~D~i~~~~~---~~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 118 EPVQSRVEEFP--SEPPFDGVISRAF---ASLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp EEEECCTTTSC--CCSCEEEEECSCS---SSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred EEEecchhhCC--ccCCcCEEEEecc---CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 77788776632 2368999998654 34557899999999999999887543
No 147
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.98 E-value=3e-09 Score=99.28 Aligned_cols=115 Identities=13% Similarity=0.117 Sum_probs=83.7
Q ss_pred hHHHHHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHH
Q 041517 142 SYGAVFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQF 218 (327)
Q Consensus 142 ~~g~lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~F 218 (327)
++..++..+++.. +..+|||+|||+|..++.++.. ++.+|+++|+++.+.+.+++
T Consensus 107 ~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-----~~~~v~~vDis~~al~~A~~----------------- 164 (284)
T 1nv8_A 107 ETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-----SDAIVFATDVSSKAVEIARK----------------- 164 (284)
T ss_dssp THHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-----SSCEEEEEESCHHHHHHHHH-----------------
T ss_pred hHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-----CCCEEEEEECCHHHHHHHHH-----------------
Confidence 3444555544432 4579999999999999999983 57899999999999988876
Q ss_pred HHHHhhhccCCcccceEeeecchhhhhhhcCCcE---eEEEEcCCC-----------CCCcH---------HHHHHHHH-
Q 041517 219 LQNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVG---DLIEIDAGH-----------DFNSA---------WADINRAW- 274 (327)
Q Consensus 219 l~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~f---DLIfIDa~h-----------~~~~v---------~~dl~~~~- 274 (327)
|+...+..++ +.+..++..+.++ ++| |+|+.+.-. .+++. ...++.+.
T Consensus 165 --n~~~~~l~~~---v~~~~~D~~~~~~---~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~ 236 (284)
T 1nv8_A 165 --NAERHGVSDR---FFVRKGEFLEPFK---EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFG 236 (284)
T ss_dssp --HHHHTTCTTS---EEEEESSTTGGGG---GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHH
T ss_pred --HHHHcCCCCc---eEEEECcchhhcc---cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHH
Confidence 4444455444 8888998877543 468 999997210 02222 25788999
Q ss_pred ccCCCCeEEEEE
Q 041517 275 RILRPGGVIFGH 286 (327)
Q Consensus 275 ~lL~pGGvIi~d 286 (327)
+.|+|||++++.
T Consensus 237 ~~l~pgG~l~~e 248 (284)
T 1nv8_A 237 RYDTSGKIVLME 248 (284)
T ss_dssp HCCCTTCEEEEE
T ss_pred hcCCCCCEEEEE
Confidence 999999999983
No 148
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.98 E-value=1.1e-09 Score=99.89 Aligned_cols=129 Identities=9% Similarity=-0.061 Sum_probs=81.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|+.+..+|+. +++.++|+++|.++.+.+...+ .... . .+ +
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~---v~~~G~V~avD~s~~~l~~l~~-------------------~a~~--r-~n---v 127 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDI---IELNGKAYGVEFSPRVVRELLL-------------------VAQR--R-PN---I 127 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH---HTTTSEEEEEECCHHHHHHHHH-------------------HHHH--C-TT---E
T ss_pred CCCEEEEEeecCCHHHHHHHHH---hCCCCEEEEEECcHHHHHHHHH-------------------Hhhh--c-CC---e
Confidence 3579999999999999999985 5678999999998876431111 1100 0 12 7
Q ss_pred Eeeecchhhhh--hhcCCcEeEEEEcCCCCCCcHHHHH-HHHHccCCCCeEEEEEcCCC----CCCchhHHHHHHHHHHH
Q 041517 235 PFSSGSALTKL--CEWGVVGDLIEIDAGHDFNSAWADI-NRAWRILRPGGVIFGHDYFT----AADNRGVRRAVNLFAKI 307 (327)
Q Consensus 235 ~~~~gda~~~L--~~l~~~fDLIfIDa~h~~~~v~~dl-~~~~~lL~pGGvIi~dD~~~----~~~~~GV~~Av~~f~~~ 307 (327)
.+..+|+.... ..+.++||+||+|..+.. ....+ +.+.+.|+|||.+++--... ..+...+.+-+..+++.
T Consensus 128 ~~i~~Da~~~~~~~~~~~~~D~I~~d~a~~~--~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~ 205 (232)
T 3id6_C 128 FPLLADARFPQSYKSVVENVDVLYVDIAQPD--QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLEN 205 (232)
T ss_dssp EEEECCTTCGGGTTTTCCCEEEEEECCCCTT--HHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHH
T ss_pred EEEEcccccchhhhccccceEEEEecCCChh--HHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHH
Confidence 77778766421 123478999999987732 22444 45556999999988751111 00111233445556667
Q ss_pred cCCeEE
Q 041517 308 NGLKVQ 313 (327)
Q Consensus 308 ~gl~v~ 313 (327)
.|+++.
T Consensus 206 ~gf~~~ 211 (232)
T 3id6_C 206 SNFETI 211 (232)
T ss_dssp TTEEEE
T ss_pred CCCEEE
Confidence 787755
No 149
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.98 E-value=4.9e-10 Score=104.38 Aligned_cols=130 Identities=16% Similarity=0.089 Sum_probs=81.7
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCc-cc------------c----------
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPM-VN------------G---------- 210 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~-~~------------g---------- 210 (327)
.++++|||||||+|..++.+++. + +..+|++||+++.+.+.|++...... .. +
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~---~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACK---W-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTV 120 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHH---T-CCSEEEEEESCHHHHHHHHHTC------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHH---c-CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccc
Confidence 35789999999999999999985 3 36799999999999998887542100 00 0
Q ss_pred -chHHHHHHHH----HHh----------hhccCCcccceEeeecchhhh----hhhcCCcEeEEEEcCCC-------CCC
Q 041517 211 -NVLLYFQFLQ----NVI----------YQNAIDSVLPVPFSSGSALTK----LCEWGVVGDLIEIDAGH-------DFN 264 (327)
Q Consensus 211 -~~~~~~~Fl~----nv~----------~~g~~~~v~~V~~~~gda~~~----L~~l~~~fDLIfIDa~h-------~~~ 264 (327)
....+..-+. .+. ...+.+ .|.+..++..+. ++...+.||+|+.-... ...
T Consensus 121 ~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~---~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~ 197 (292)
T 3g07_A 121 RKRSCFPASLTASRGPIAAPQVPLDGADTSVFPN---NVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDE 197 (292)
T ss_dssp ---------------------CCSSTTCCSSTTT---TEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHH
T ss_pred cccccccchhhhccCccccccccccccccccccc---cceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHH
Confidence 0000000000 000 000001 278888876532 12235799999987652 122
Q ss_pred cHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 265 SAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 265 ~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.....++.+.++|+|||++++..-.|
T Consensus 198 ~~~~~l~~~~~~LkpGG~lil~~~~~ 223 (292)
T 3g07_A 198 GLKRMFRRIYRHLRPGGILVLEPQPW 223 (292)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEECCCH
T ss_pred HHHHHHHHHHHHhCCCcEEEEecCCc
Confidence 55677999999999999999976655
No 150
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.98 E-value=1e-09 Score=98.69 Aligned_cols=137 Identities=14% Similarity=0.147 Sum_probs=95.7
Q ss_pred HHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHH
Q 041517 146 VFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNV 222 (327)
Q Consensus 146 lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv 222 (327)
.+..+++.. ++.+|||||||+|..+..+++.. +.+|+++|+++.+.+.+++...
T Consensus 43 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~------------------ 99 (266)
T 3ujc_A 43 ATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-----GAHTHGIDICSNIVNMANERVS------------------ 99 (266)
T ss_dssp HHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHTCC------------------
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHHhh------------------
Confidence 445555443 35699999999999999999852 5799999999998887766331
Q ss_pred hhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCC--CcHHHHHHHHHccCCCCeEEEEEcCCCCC--Cch-h
Q 041517 223 IYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDF--NSAWADINRAWRILRPGGVIFGHDYFTAA--DNR-G 296 (327)
Q Consensus 223 ~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~--~~v~~dl~~~~~lL~pGGvIi~dD~~~~~--~~~-G 296 (327)
.. .+ +.+..++..+. +..+++||+|+.... |.. ......++.+.++|+|||++++.++.... .+. .
T Consensus 100 -~~---~~---~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 171 (266)
T 3ujc_A 100 -GN---NK---IIFEANDILTK-EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDE 171 (266)
T ss_dssp -SC---TT---EEEEECCTTTC-CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHH
T ss_pred -cC---CC---eEEEECccccC-CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHH
Confidence 00 12 77888877653 333579999998654 323 45667899999999999999999875421 000 0
Q ss_pred -------------HHHHHHHHHHHcCCeEE
Q 041517 297 -------------VRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 297 -------------V~~Av~~f~~~~gl~v~ 313 (327)
-...+..+++..|+++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 201 (266)
T 3ujc_A 172 FKEYVKQRKYTLITVEEYADILTACNFKNV 201 (266)
T ss_dssp HHHHHHHHTCCCCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHcCCeEE
Confidence 13455666777887654
No 151
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.98 E-value=9.6e-10 Score=97.81 Aligned_cols=110 Identities=15% Similarity=0.064 Sum_probs=80.6
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
.+..++...+..+|||||||+|..+..+++. + ..+++++|+++.+.+.+++... .
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~-~~~v~~vD~s~~~~~~a~~~~~-------------------~- 88 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH----G-ASYVLGLDLSEKMLARARAAGP-------------------D- 88 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT----T-CSEEEEEESCHHHHHHHHHTSC-------------------S-
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC----C-CCeEEEEcCCHHHHHHHHHhcc-------------------c-
Confidence 3444444456789999999999999999883 2 2399999999988887765321 0
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
.+ +.+..++..+ ++..+++||+|+.... |..+.....++.+.+.|+|||++++.+
T Consensus 89 ---~~---~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 89 ---TG---ITYERADLDK-LHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ---SS---EEEEECCGGG-CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CC---ceEEEcChhh-ccCCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 11 7777777665 2322578999997654 333556788999999999999999865
No 152
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.98 E-value=3.8e-09 Score=110.43 Aligned_cols=121 Identities=20% Similarity=0.192 Sum_probs=90.2
Q ss_pred HHHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHH
Q 041517 143 YGAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNV 222 (327)
Q Consensus 143 ~g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv 222 (327)
+...-..+.+..+.++|||+|||+|..++.+|+. + ..+|++||.++.+.+.+++ |+
T Consensus 527 ~r~~r~~l~~~~~g~~VLDlg~GtG~~sl~aa~~----g-a~~V~aVD~s~~al~~a~~-------------------N~ 582 (703)
T 3v97_A 527 HRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLG----G-ARSTTTVDMSRTYLEWAER-------------------NL 582 (703)
T ss_dssp GHHHHHHHHHHCTTCEEEEESCTTCHHHHHHHHT----T-CSEEEEEESCHHHHHHHHH-------------------HH
T ss_pred HHHHHHHHHHhcCCCcEEEeeechhHHHHHHHHC----C-CCEEEEEeCCHHHHHHHHH-------------------HH
Confidence 3333344444557789999999999999998873 2 3579999999999988876 45
Q ss_pred hhhccC-CcccceEeeecchhhhhhhcCCcEeEEEEcCCC---------CCC---cHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 223 IYQNAI-DSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGH---------DFN---SAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 223 ~~~g~~-~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h---------~~~---~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
...++. ++ +++..+|+.+.++..+++||+|++|... ... .....++.+.++|+|||++++....
T Consensus 583 ~~ngl~~~~---v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 583 RLNGLTGRA---HRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp HHTTCCSTT---EEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHcCCCccc---eEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 444554 34 8999999999887777899999999642 011 1223467888999999999987776
Q ss_pred C
Q 041517 290 T 290 (327)
Q Consensus 290 ~ 290 (327)
.
T Consensus 660 ~ 660 (703)
T 3v97_A 660 R 660 (703)
T ss_dssp T
T ss_pred c
Confidence 4
No 153
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.97 E-value=4.2e-09 Score=95.82 Aligned_cols=111 Identities=14% Similarity=-0.055 Sum_probs=76.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC------ChhhhhhhcccCccccchHHHHHHHHHHhhhccC
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG------WPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI 228 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~------~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~ 228 (327)
+..+|||||||+|..+..+++. .++..+|+++|+++. +.+.+++. +...+..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~---~g~~~~v~gvD~s~~~~~~~~~~~~a~~~-------------------~~~~~~~ 100 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQ---VGSSGHVTGIDIASPDYGAPLTLGQAWNH-------------------LLAGPLG 100 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH---HCTTCEEEEECSSCTTCCSSSCHHHHHHH-------------------HHTSTTG
T ss_pred CCCEEEEeCCCCCHHHHHHHHH---hCCCCEEEEEECCccccccHHHHHHHHHH-------------------HHhcCCC
Confidence 4679999999999999999985 355689999999997 77777652 2222322
Q ss_pred CcccceEeeecc-hh-hhhhhcCCcEeEEEEcCCC-CCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 229 DSVLPVPFSSGS-AL-TKLCEWGVVGDLIEIDAGH-DFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 229 ~~v~~V~~~~gd-a~-~~L~~l~~~fDLIfIDa~h-~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
++ +.+..++ .. ..++..+++||+|+..... ........++.+..+++|||++++.++..
T Consensus 101 ~~---v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 101 DR---LTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp GG---EEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred Cc---eEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 23 7777776 21 1223335789999987543 22333445566666677799999988765
No 154
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.97 E-value=7.7e-10 Score=98.27 Aligned_cols=109 Identities=9% Similarity=-0.075 Sum_probs=78.8
Q ss_pred HHHHHHhhc--CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 146 VFGNLIDKV--RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 146 lL~~L~~~~--~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
.+..++... ++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++. ..
T Consensus 26 ~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~------~~~~~~~D~s~~~~~~a~~~-------------------~~ 80 (246)
T 1y8c_A 26 FIIEKCVENNLVFDDYLDLACGTGNLTENLCPK------FKNTWAVDLSQEMLSEAENK-------------------FR 80 (246)
T ss_dssp HHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG------SSEEEEECSCHHHHHHHHHH-------------------HH
T ss_pred HHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC------CCcEEEEECCHHHHHHHHHH-------------------Hh
Confidence 344444433 5689999999999999998874 56899999999988877652 22
Q ss_pred hhccCCcccceEeeecchhhhhhhcCCcEeEEEEcC-C-CCC---CcHHHHHHHHHccCCCCeEEEEE
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDA-G-HDF---NSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa-~-h~~---~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
..+. + +.+..++..+. + ..++||+|+... . +.. +.....++.+.++|+|||+++++
T Consensus 81 ~~~~--~---~~~~~~d~~~~-~-~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 81 SQGL--K---PRLACQDISNL-N-INRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp HTTC--C---CEEECCCGGGC-C-CSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hcCC--C---eEEEecccccC-C-ccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2221 2 67777776653 2 237899999965 2 222 34567889999999999999984
No 155
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.97 E-value=1.5e-09 Score=102.38 Aligned_cols=102 Identities=20% Similarity=0.189 Sum_probs=77.0
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.+..+|||||||+|..++.+++. .+.+++|+++|+++.+.+.+++ ++...+.. .
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~---~~~~~~v~gvD~s~~~~~~a~~-------------------~~~~~g~~-~--- 127 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRV---VGEKGLVVSVEYSRKICEIAKR-------------------NVERLGIE-N--- 127 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH---HCTTCEEEEEESCHHHHHHHHH-------------------HHHHTTCC-S---
T ss_pred CCcCEEEEecCCchHHHHHHHHh---cCCCCEEEEEECCHHHHHHHHH-------------------HHHHcCCC-C---
Confidence 34679999999999999999985 2335889999999998887766 33333332 1
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.+..+|..+.++. .++||+|+++.....-. +.+.+.|+|||++++..
T Consensus 128 v~~~~~d~~~~~~~-~~~fD~Iv~~~~~~~~~-----~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 128 VIFVCGDGYYGVPE-FSPYDVIFVTVGVDEVP-----ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp EEEEESCGGGCCGG-GCCEEEEEECSBBSCCC-----HHHHHHEEEEEEEEEEB
T ss_pred eEEEECChhhcccc-CCCeEEEEEcCCHHHHH-----HHHHHhcCCCcEEEEEE
Confidence 77888887764442 46899999997654333 57788999999999864
No 156
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.97 E-value=9.4e-10 Score=98.60 Aligned_cols=122 Identities=9% Similarity=0.000 Sum_probs=86.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. +.+|+++|+++.+.+.+++. +
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~-------------------------------~ 83 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE------GIESIGVDINEDMIKFCEGK-------------------------------F 83 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH------TCCEEEECSCHHHHHHHHTT-------------------------------S
T ss_pred CCCeEEEEeCCCCHHHHHHHhC------CCcEEEEECCHHHHHHHHhh-------------------------------c
Confidence 3589999999999999999884 56899999998877665441 4
Q ss_pred Eeeecchhhhh-hhcCCcEeEEEEcCCCC-CC--cHHHHHHHHHccCCCCeEEEEEcCCCCCC-------------chhH
Q 041517 235 PFSSGSALTKL-CEWGVVGDLIEIDAGHD-FN--SAWADINRAWRILRPGGVIFGHDYFTAAD-------------NRGV 297 (327)
Q Consensus 235 ~~~~gda~~~L-~~l~~~fDLIfIDa~h~-~~--~v~~dl~~~~~lL~pGGvIi~dD~~~~~~-------------~~GV 297 (327)
.+..++..+.+ +..+++||+|+...... .. .....++.+.+.|+|||++++........ ..--
T Consensus 84 ~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (240)
T 3dli_A 84 NVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVH 163 (240)
T ss_dssp EEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCC
T ss_pred ceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCC
Confidence 45566666644 22357899999865422 23 34688999999999999999887654110 0002
Q ss_pred HHHHHHHHHHcCCeEE
Q 041517 298 RRAVNLFAKINGLKVQ 313 (327)
Q Consensus 298 ~~Av~~f~~~~gl~v~ 313 (327)
.+.+..+++..|+++.
T Consensus 164 ~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 164 PETLKFILEYLGFRDV 179 (240)
T ss_dssp HHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHCCCeEE
Confidence 2556677778888754
No 157
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.96 E-value=1.2e-09 Score=98.44 Aligned_cols=100 Identities=12% Similarity=0.073 Sum_probs=77.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. + ..+++++|+++.+.+.+++... ..+ +
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~----~-~~~v~~vD~s~~~~~~a~~~~~-----------------------~~~---~ 92 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEH----G-AKKVLGIDLSERMLTEAKRKTT-----------------------SPV---V 92 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT----T-CSEEEEEESCHHHHHHHHHHCC-----------------------CTT---E
T ss_pred CCCEEEEECCCCCHHHHHHHHc----C-CCEEEEEECCHHHHHHHHHhhc-----------------------cCC---e
Confidence 5789999999999999999984 2 2399999999988887765321 112 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
.+..++..+ ++..+++||+|+.... +........++.+.++|+|||++++.
T Consensus 93 ~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 93 CYEQKAIED-IAIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEECCGGG-CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcchhh-CCCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 788888755 3433579999998654 22356678899999999999999986
No 158
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.96 E-value=1.6e-09 Score=99.86 Aligned_cols=124 Identities=15% Similarity=0.078 Sum_probs=87.7
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh-ccCCc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ-NAIDS 230 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~-g~~~~ 230 (327)
...+..+|||+|||+|..++.+++. ++++.+|+++|.++.+.+.+++ |+... |. ++
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~---~~~~~~v~~vD~s~~~~~~a~~-------------------~~~~~~g~-~~ 163 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYA---LNGKGTLTVVERDEDNLKKAMD-------------------NLSEFYDI-GN 163 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHH---HTTSSEEEEECSCHHHHHHHHH-------------------HHHTTSCC-TT
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHH---cCCCCEEEEEECCHHHHHHHHH-------------------HHHhcCCC-Cc
Confidence 3345679999999999999999985 3567899999999988887766 33322 21 22
Q ss_pred ccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCC
Q 041517 231 VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGL 310 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl 310 (327)
+.+..+|..+.++ +++||+|++|... ....++.+.+.|+|||++++.+... ....+.. ......|+
T Consensus 164 ---v~~~~~d~~~~~~--~~~fD~Vi~~~~~----~~~~l~~~~~~LkpgG~l~i~~~~~----~~~~~~~-~~l~~~Gf 229 (275)
T 1yb2_A 164 ---VRTSRSDIADFIS--DQMYDAVIADIPD----PWNHVQKIASMMKPGSVATFYLPNF----DQSEKTV-LSLSASGM 229 (275)
T ss_dssp ---EEEECSCTTTCCC--SCCEEEEEECCSC----GGGSHHHHHHTEEEEEEEEEEESSH----HHHHHHH-HHSGGGTE
T ss_pred ---EEEEECchhccCc--CCCccEEEEcCcC----HHHHHHHHHHHcCCCCEEEEEeCCH----HHHHHHH-HHHHHCCC
Confidence 7888888776332 3689999996542 3478899999999999999876543 2333333 33445665
Q ss_pred eE
Q 041517 311 KV 312 (327)
Q Consensus 311 ~v 312 (327)
.+
T Consensus 230 ~~ 231 (275)
T 1yb2_A 230 HH 231 (275)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 159
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.96 E-value=9e-10 Score=95.91 Aligned_cols=116 Identities=14% Similarity=0.039 Sum_probs=79.8
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.++..+....++.+|||||||+|..++.++.. .+.+++++|+++.+.+.+++.. ..
T Consensus 13 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~-----~~~~v~~vD~s~~~~~~a~~~~-------------------~~ 68 (209)
T 2p8j_A 13 RFLKYCNESNLDKTVLDCGAGGDLPPLSIFVE-----DGYKTYGIEISDLQLKKAENFS-------------------RE 68 (209)
T ss_dssp HHHHHHHHSSSCSEEEEESCCSSSCTHHHHHH-----TTCEEEEEECCHHHHHHHHHHH-------------------HH
T ss_pred HHHHHHhccCCCCEEEEECCCCCHHHHHHHHh-----CCCEEEEEECCHHHHHHHHHHH-------------------Hh
Confidence 45555544455789999999999975444432 2679999999999988776532 11
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCC--CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDF--NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~--~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+. + +.+..++..+ ++..+++||+|+.... +.. ......++.+.+.|+|||++++.++..
T Consensus 69 ~~~--~---~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 69 NNF--K---LNISKGDIRK-LPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp HTC--C---CCEEECCTTS-CCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred cCC--c---eEEEECchhh-CCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 121 2 6666776654 2333478999998643 212 345677899999999999999988754
No 160
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.96 E-value=1.5e-09 Score=101.57 Aligned_cols=133 Identities=15% Similarity=0.118 Sum_probs=98.8
Q ss_pred HHhhcC-CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccC
Q 041517 150 LIDKVR-PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI 228 (327)
Q Consensus 150 L~~~~~-p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~ 228 (327)
+++..+ ..+|||+|||+|..++.+|.. + ..+|+++|.++...+.+++ |+...++.
T Consensus 119 i~~~~~~g~~VlD~~aG~G~~~i~~a~~----g-~~~V~avD~np~a~~~~~~-------------------N~~~N~v~ 174 (278)
T 3k6r_A 119 MAKVAKPDELVVDMFAGIGHLSLPIAVY----G-KAKVIAIEKDPYTFKFLVE-------------------NIHLNKVE 174 (278)
T ss_dssp HHHHCCTTCEEEETTCTTTTTTHHHHHH----T-CCEEEEECCCHHHHHHHHH-------------------HHHHTTCT
T ss_pred HHHhcCCCCEEEEecCcCcHHHHHHHHh----c-CCeEEEEECCHHHHHHHHH-------------------HHHHcCCC
Confidence 334444 678999999999999999974 2 4689999999988877765 66666777
Q ss_pred CcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCC-chhHHHHHHHHHHH
Q 041517 229 DSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAAD-NRGVRRAVNLFAKI 307 (327)
Q Consensus 229 ~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~-~~GV~~Av~~f~~~ 307 (327)
++ +.+..+|+.+... .+.||.|++|--+.. ...++.++++|++||+|.+++...... .....+.++..+..
T Consensus 175 ~~---v~~~~~D~~~~~~--~~~~D~Vi~~~p~~~---~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~ 246 (278)
T 3k6r_A 175 DR---MSAYNMDNRDFPG--ENIADRILMGYVVRT---HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKE 246 (278)
T ss_dssp TT---EEEECSCTTTCCC--CSCEEEEEECCCSSG---GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHH
T ss_pred Cc---EEEEeCcHHHhcc--ccCCCEEEECCCCcH---HHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHH
Confidence 76 8888999887543 368999999865432 357788999999999998887654211 12345667778888
Q ss_pred cCCeEEE
Q 041517 308 NGLKVQI 314 (327)
Q Consensus 308 ~gl~v~~ 314 (327)
.|.++..
T Consensus 247 ~g~~v~~ 253 (278)
T 3k6r_A 247 YGYDVEK 253 (278)
T ss_dssp TTCEEEE
T ss_pred cCCcEEE
Confidence 8887654
No 161
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.96 E-value=2.6e-09 Score=102.11 Aligned_cols=105 Identities=15% Similarity=0.107 Sum_probs=76.3
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
...+..+|||||||+|..++.+++. + ..+|+++|.++ +.+.+++ ++...++.++
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~----g-~~~v~gvD~s~-~~~~a~~-------------------~~~~~~~~~~- 114 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKA----G-AKKVLGVDQSE-ILYQAMD-------------------IIRLNKLEDT- 114 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHT----T-CSEEEEEESST-HHHHHHH-------------------HHHHTTCTTT-
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHc----C-CCEEEEEChHH-HHHHHHH-------------------HHHHcCCCCc-
Confidence 3456789999999999999999883 2 46999999996 8777765 3333344344
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcC---CCCCC-cHHHHHHHHHccCCCCeEEEE
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDA---GHDFN-SAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa---~h~~~-~v~~dl~~~~~lL~pGGvIi~ 285 (327)
+.+..++..+. +..+++||+|+.+. ...+. .....++.+.+.|+|||+++.
T Consensus 115 --i~~~~~d~~~~-~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 115 --ITLIKGKIEEV-HLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp --EEEEESCTTTS-CCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred --EEEEEeeHHHh-cCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 88888887663 22237899999876 22222 334578888999999999983
No 162
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.96 E-value=1.6e-09 Score=97.20 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=74.7
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
...+..+|||||||+|+.+..+++. .+ .+|+++|.++.+.+.+++ ++...+.. .
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~---~~--~~v~~vD~~~~~~~~a~~-------------------~~~~~~~~-~- 141 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEI---VK--TDVYTIERIPELVEFAKR-------------------NLERAGVK-N- 141 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHH---HC--SCEEEEESCHHHHHHHHH-------------------HHHHTTCC-S-
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHH---hC--CEEEEEeCCHHHHHHHHH-------------------HHHHcCCC-C-
Confidence 3345679999999999999999985 22 799999999988887765 33333321 1
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+.+..++....++. ..+||+|+++.....-. +.+.+.|+|||++++.-.
T Consensus 142 --v~~~~~d~~~~~~~-~~~fD~Ii~~~~~~~~~-----~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 142 --VHVILGDGSKGFPP-KAPYDVIIVTAGAPKIP-----EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp --EEEEESCGGGCCGG-GCCEEEEEECSBBSSCC-----HHHHHTEEEEEEEEEEEC
T ss_pred --cEEEECCcccCCCC-CCCccEEEECCcHHHHH-----HHHHHhcCCCcEEEEEEe
Confidence 77778876443332 34699999987654333 478899999999888544
No 163
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.96 E-value=2.2e-09 Score=94.66 Aligned_cols=110 Identities=15% Similarity=0.123 Sum_probs=79.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCc-ccc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDS-VLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~-v~~ 233 (327)
+..+|||||||+|..+..+++. +.+++++|+++.+.+.+++... ..+.... ...
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~-------------------~~~~~~~~~~~ 84 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK------GYSVTGIDINSEAIRLAETAAR-------------------SPGLNQKTGGK 84 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHTT-------------------CCSCCSSSSCE
T ss_pred CCCeEEEECCCCCHHHHHHHhC------CCeEEEEECCHHHHHHHHHHHH-------------------hcCCccccCcc
Confidence 4679999999999999999984 6799999999998887766432 1111000 012
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCC-CCcHH---HHHHHHHccCCCCeEEEEEcCCC
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHD-FNSAW---ADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~-~~~v~---~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+.+..++..+ ++..+++||+|+...... ..... ..++.+.++|+|||++++.++..
T Consensus 85 ~~~~~~d~~~-~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 85 AEFKVENASS-LSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp EEEEECCTTS-CCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eEEEEecccc-cCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 6777777654 233357899999875432 22333 68999999999999999987754
No 164
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.95 E-value=4.2e-09 Score=101.70 Aligned_cols=131 Identities=11% Similarity=-0.033 Sum_probs=90.8
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||+| |+|..++.++.. ++..+|+++|+++.+.+.+++ |+...|+. + |
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~----~~~~~v~~vDi~~~~l~~a~~-------------------~~~~~g~~-~---v 223 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLS----GLPKRIAVLDIDERLTKFIEK-------------------AANEIGYE-D---I 223 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHH----TCCSEEEEECSCHHHHHHHHH-------------------HHHHHTCC-C---E
T ss_pred CCCEEEEEC-CCCHHHHHHHHh----CCCCEEEEEECCHHHHHHHHH-------------------HHHHcCCC-C---E
Confidence 468999999 999999999874 456899999999999998877 44444443 3 8
Q ss_pred Eeeecchhhhhhh-cCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCe-EEEEEcCCCCCCchhHHHHHHHHHH-HcCCe
Q 041517 235 PFSSGSALTKLCE-WGVVGDLIEIDAGHDFNSAWADINRAWRILRPGG-VIFGHDYFTAADNRGVRRAVNLFAK-INGLK 311 (327)
Q Consensus 235 ~~~~gda~~~L~~-l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGG-vIi~dD~~~~~~~~GV~~Av~~f~~-~~gl~ 311 (327)
.+..+|..+.++. .++.||+|++|.-.........++.+.+.|+||| ++++.-... +..+.....+..+.. ..|+.
T Consensus 224 ~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~~-~~~~~~~~~~~~~l~~~~g~~ 302 (373)
T 2qm3_A 224 EIFTFDLRKPLPDYALHKFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFGITRR-ESSLDKWREIQKLLLNEFNVV 302 (373)
T ss_dssp EEECCCTTSCCCTTTSSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEECTT-TCCHHHHHHHHHHHHHTSCCE
T ss_pred EEEEChhhhhchhhccCCccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEEEEecC-cCCHHHHHHHHHHHHHhcCcc
Confidence 8889988775553 4568999999853211223567889999999999 434443321 112222245566666 67776
Q ss_pred EEE
Q 041517 312 VQI 314 (327)
Q Consensus 312 v~~ 314 (327)
+..
T Consensus 303 ~~~ 305 (373)
T 2qm3_A 303 ITD 305 (373)
T ss_dssp EEE
T ss_pred hhh
Confidence 543
No 165
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.95 E-value=2.5e-09 Score=91.28 Aligned_cols=132 Identities=14% Similarity=0.012 Sum_probs=89.2
Q ss_pred HHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 144 GAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 144 g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
..++..++ .++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++...
T Consensus 37 ~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~~~~~~~~a~~~~~------------------- 89 (195)
T 3cgg_A 37 ARLIDAMA--PRGAKILDAGCGQGRIGGYLSKQ------GHDVLGTDLDPILIDYAKQDFP------------------- 89 (195)
T ss_dssp HHHHHHHS--CTTCEEEEETCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHCT-------------------
T ss_pred HHHHHHhc--cCCCeEEEECCCCCHHHHHHHHC------CCcEEEEcCCHHHHHHHHHhCC-------------------
Confidence 34555553 25679999999999999999984 5799999999888776655211
Q ss_pred hhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCC---CcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHH
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDF---NSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRR 299 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~---~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~ 299 (327)
. +.+..++..+. +..+++||+|+..+. ..+ +.....++.+.+.|+|||++++....... . -..
T Consensus 90 ------~---~~~~~~d~~~~-~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~--~-~~~ 156 (195)
T 3cgg_A 90 ------E---ARWVVGDLSVD-QISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRG--W-VFG 156 (195)
T ss_dssp ------T---SEEEECCTTTS-CCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSS--C-CHH
T ss_pred ------C---CcEEEcccccC-CCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCC--c-CHH
Confidence 1 55566665542 222468999999732 222 23357789999999999999986554311 1 134
Q ss_pred HHHHHHHHcCCeEEEc
Q 041517 300 AVNLFAKINGLKVQID 315 (327)
Q Consensus 300 Av~~f~~~~gl~v~~~ 315 (327)
.+..+++..|+++...
T Consensus 157 ~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 157 DFLEVAERVGLELENA 172 (195)
T ss_dssp HHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHcCCEEeee
Confidence 4555666778876643
No 166
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.95 E-value=6.3e-09 Score=86.84 Aligned_cols=99 Identities=14% Similarity=0.185 Sum_probs=71.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|..+..+++. ++++.+++++|.++ +.+.. + +
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~---~~~~~~v~~~D~~~-~~~~~---------------------~------------~ 64 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQ---IGGKGRIIACDLLP-MDPIV---------------------G------------V 64 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHH---HCTTCEEEEEESSC-CCCCT---------------------T------------E
T ss_pred CCCeEEEeCCCCCHHHHHHHHH---hCCCCeEEEEECcc-ccccC---------------------c------------E
Confidence 4679999999999999999985 45678999999998 65320 1 4
Q ss_pred Eeeecchhhh-----hh--hcCCcEeEEEEcCCCCC-CcH-----------HHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTK-----LC--EWGVVGDLIEIDAGHDF-NSA-----------WADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~-----L~--~l~~~fDLIfIDa~h~~-~~v-----------~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+..++..+. ++ ..+.+||+|+.+..... ... ...++.+.++|+|||++++..+..
T Consensus 65 ~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 65 DFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp EEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred EEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 4445554332 11 11368999999865322 111 467899999999999999877654
No 167
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.95 E-value=1.1e-09 Score=99.41 Aligned_cols=111 Identities=12% Similarity=0.052 Sum_probs=77.1
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..++.||+. .++..+++||+++.+.+.|++... . +......+. . .|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~----~p~~~v~GiDis~~~l~~A~~~~~------------~-l~~~~~~~~-~---nv 104 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPL----FPDTLILGLEIRVKVSDYVQDRIR------------A-LRAAPAGGF-Q---NI 104 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGG----STTSEEEEEESCHHHHHHHHHHHH------------H-HHHSTTCCC-T---TE
T ss_pred CCCeEEEEccCCcHHHHHHHHH----CCCCeEEEEECCHHHHHHHHHHHH------------H-HHHHHhcCC-C---eE
Confidence 4568999999999999999974 457899999999999988866321 0 000001111 1 28
Q ss_pred Eeeecchhhhhhh--cCCcEeEEEEcCCCCCCc---------HHHHHHHHHccCCCCeEEEEE
Q 041517 235 PFSSGSALTKLCE--WGVVGDLIEIDAGHDFNS---------AWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 235 ~~~~gda~~~L~~--l~~~fDLIfIDa~h~~~~---------v~~dl~~~~~lL~pGGvIi~d 286 (327)
.+..+++.+.++. .++.||.|++...-.+.. ....++.+.++|+|||++++.
T Consensus 105 ~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 105 ACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp EEEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 8889998775553 257899999853211110 125789999999999998874
No 168
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.95 E-value=2.2e-09 Score=102.92 Aligned_cols=108 Identities=17% Similarity=0.068 Sum_probs=79.9
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..+.++|||||||+|..++.+++. ...+|++||.+ .+.+.|++ ++...+..++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-----g~~~v~gvD~s-~~l~~a~~-------------------~~~~~~~~~~-- 116 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-----GARKVIGIECS-SISDYAVK-------------------IVKANKLDHV-- 116 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-----TCSEEEEEECS-THHHHHHH-------------------HHHHTTCTTT--
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-----CCCEEEEECcH-HHHHHHHH-------------------HHHHcCCCCc--
Confidence 456789999999999999999984 25699999999 48877766 3334455555
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCC----CCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAG----HDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~----h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
|.+..++..+. +..+++||+|+.+.. +........++.+.++|+|||+++.+...
T Consensus 117 -v~~~~~d~~~~-~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 175 (349)
T 3q7e_A 117 -VTIIKGKVEEV-ELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRAT 175 (349)
T ss_dssp -EEEEESCTTTC-CCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEEE
T ss_pred -EEEEECcHHHc-cCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccce
Confidence 88888887764 222479999998752 22234456678888999999999865543
No 169
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.94 E-value=9.1e-10 Score=93.10 Aligned_cols=106 Identities=21% Similarity=0.131 Sum_probs=79.1
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..+ ...+..+|||||||+|..+..+++. ..+++++|+++.+.+.+++.
T Consensus 9 ~~~~~-~~~~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~----------------------- 58 (170)
T 3i9f_A 9 YLPNI-FEGKKGVIVDYGCGNGFYCKYLLEF------ATKLYCIDINVIALKEVKEK----------------------- 58 (170)
T ss_dssp THHHH-HSSCCEEEEEETCTTCTTHHHHHTT------EEEEEEECSCHHHHHHHHHH-----------------------
T ss_pred HHHhc-CcCCCCeEEEECCCCCHHHHHHHhh------cCeEEEEeCCHHHHHHHHHh-----------------------
Confidence 34443 3345679999999999999999984 24999999998877766542
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
..+ +.+..++ ++..+++||+|+.... +..+.....++.+.+.|+|||++++.++..
T Consensus 59 --~~~---v~~~~~d----~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 59 --FDS---VITLSDP----KEIPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp --CTT---SEEESSG----GGSCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred --CCC---cEEEeCC----CCCCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 011 6677776 3333578999997654 334566788999999999999999998865
No 170
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.94 E-value=9.6e-09 Score=101.03 Aligned_cols=140 Identities=11% Similarity=0.062 Sum_probs=95.4
Q ss_pred HHHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 144 GAVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 144 g~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
..++..++...+..+|||+|||.|..+..+++. . ++++|+++|+++.+.+.+++ |+.
T Consensus 235 s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~---~-~~~~v~a~D~~~~~l~~~~~-------------------~~~ 291 (429)
T 1sqg_A 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEV---A-PEAQVVAVDIDEQRLSRVYD-------------------NLK 291 (429)
T ss_dssp HHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHH---C-TTCEEEEEESSTTTHHHHHH-------------------HHH
T ss_pred HHHHHHHcCCCCcCeEEEECCCchHHHHHHHHH---c-CCCEEEEECCCHHHHHHHHH-------------------HHH
Confidence 344555555545679999999999999999985 2 35899999999999887765 444
Q ss_pred hhccCCcccceEeeecchhhhhhhc-CCcEeEEEEcCCCCC-------CcH----------------HHHHHHHHccCCC
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEW-GVVGDLIEIDAGHDF-------NSA----------------WADINRAWRILRP 279 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~-------~~v----------------~~dl~~~~~lL~p 279 (327)
..|.. +.+..+|+.+....+ ++.||+|++|+.... +.. ...++.+.++|+|
T Consensus 292 ~~g~~-----~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp 366 (429)
T 1sqg_A 292 RLGMK-----ATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT 366 (429)
T ss_dssp HTTCC-----CEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE
T ss_pred HcCCC-----eEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33431 566777776543223 368999999964321 111 3568899999999
Q ss_pred CeEEEEEcCCCCCCchhHHHHHHHHHHHc-CCeEE
Q 041517 280 GGVIFGHDYFTAADNRGVRRAVNLFAKIN-GLKVQ 313 (327)
Q Consensus 280 GGvIi~dD~~~~~~~~GV~~Av~~f~~~~-gl~v~ 313 (327)
||++++.++...+. .-.+.+..|.+.+ ++++.
T Consensus 367 GG~lvystcs~~~~--ene~~v~~~l~~~~~~~~~ 399 (429)
T 1sqg_A 367 GGTLVYATCSVLPE--ENSLQIKAFLQRTADAELC 399 (429)
T ss_dssp EEEEEEEESCCCGG--GTHHHHHHHHHHCTTCEEC
T ss_pred CCEEEEEECCCChh--hHHHHHHHHHHhCCCCEEe
Confidence 99999998876331 1123455555544 45543
No 171
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.94 E-value=2.8e-10 Score=101.58 Aligned_cols=114 Identities=13% Similarity=-0.020 Sum_probs=81.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. +.+|+++|+++.+.+.+++.. .+ +
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~-------------------------~~---~ 93 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ------AARWAAYDFSPELLKLARANA-------------------------PH---A 93 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHHC-------------------------TT---S
T ss_pred CCCeEEEeCCCCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHhC-------------------------CC---c
Confidence 4689999999999999999874 679999999999888776521 11 6
Q ss_pred Eeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeEE
Q 041517 235 PFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 235 ~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v~ 313 (327)
.+..++..+.++.. +++||+|+...+ ....++.+.+.|+|||+++...... . .+.+...+...|+++.
T Consensus 94 ~~~~~d~~~~~~~~~~~~fD~v~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~--~----~~~~~~~l~~~Gf~~~ 162 (226)
T 3m33_A 94 DVYEWNGKGELPAGLGAPFGLIVSRRG-----PTSVILRLPELAAPDAHFLYVGPRL--N----VPEVPERLAAVGWDIV 162 (226)
T ss_dssp EEEECCSCSSCCTTCCCCEEEEEEESC-----CSGGGGGHHHHEEEEEEEEEEESSS--C----CTHHHHHHHHTTCEEE
T ss_pred eEEEcchhhccCCcCCCCEEEEEeCCC-----HHHHHHHHHHHcCCCcEEEEeCCcC--C----HHHHHHHHHHCCCeEE
Confidence 77777775555543 579999998732 2257789999999999999332221 1 1334555566676643
No 172
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.93 E-value=2.3e-09 Score=96.00 Aligned_cols=102 Identities=19% Similarity=0.074 Sum_probs=73.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .+ .++|+++|+++.+.+.++++.. .. .+ +
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~---~~-~~~v~gvD~s~~~~~~a~~~~~-------------------~~---~~---v 124 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADI---AD-KGIVYAIEYAPRIMRELLDACA-------------------ER---EN---I 124 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHH---TT-TSEEEEEESCHHHHHHHHHHTT-------------------TC---TT---E
T ss_pred CCCEEEEEcccCCHHHHHHHHH---cC-CcEEEEEECCHHHHHHHHHHhh-------------------cC---CC---e
Confidence 3578999999999999999985 34 6899999999988877665321 11 12 6
Q ss_pred Eeeecchhhhhh--hcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 235 PFSSGSALTKLC--EWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 235 ~~~~gda~~~L~--~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
.+..+++.+... ...+.||+|+.|.... ......++.+.+.|+|||++++-
T Consensus 125 ~~~~~d~~~~~~~~~~~~~~D~v~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 125 IPILGDANKPQEYANIVEKVDVIYEDVAQP-NQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEECCTTCGGGGTTTSCCEEEEEECCCST-THHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCCcccccccCccEEEEEEecCCh-hHHHHHHHHHHHhCCCCcEEEEE
Confidence 777777655211 1136899999764321 11245689999999999998884
No 173
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.93 E-value=2.5e-09 Score=95.72 Aligned_cols=106 Identities=12% Similarity=0.075 Sum_probs=78.8
Q ss_pred HhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCc
Q 041517 151 IDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDS 230 (327)
Q Consensus 151 ~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~ 230 (327)
+...+..+|||+|||+|..++.+++. ..+++++|.++.+.+.+++ |....+...+
T Consensus 87 ~~~~~~~~vldiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~-------------------~~~~~~~~~~ 141 (248)
T 2yvl_A 87 LNLNKEKRVLEFGTGSGALLAVLSEV------AGEVWTFEAVEEFYKTAQK-------------------NLKKFNLGKN 141 (248)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEECSCHHHHHHHHH-------------------HHHHTTCCTT
T ss_pred cCCCCCCEEEEeCCCccHHHHHHHHh------CCEEEEEecCHHHHHHHHH-------------------HHHHcCCCCc
Confidence 33345679999999999999999984 6899999999998887766 3332333233
Q ss_pred ccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 231 VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+.+..++..+.+. .+..||+|+.|... ....++.+.+.|+|||++++....
T Consensus 142 ---~~~~~~d~~~~~~-~~~~~D~v~~~~~~----~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 142 ---VKFFNVDFKDAEV-PEGIFHAAFVDVRE----PWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp ---EEEECSCTTTSCC-CTTCBSEEEECSSC----GGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ---EEEEEcChhhccc-CCCcccEEEECCcC----HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7777787766431 13679999997542 346789999999999999886553
No 174
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.92 E-value=1.4e-09 Score=99.68 Aligned_cols=107 Identities=17% Similarity=0.072 Sum_probs=78.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. + ..+++++|+++.+.+.+++. ....+...+ +
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~----~-~~~v~gvD~s~~~~~~a~~~-------------------~~~~~~~~~---v 116 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA----G-IGEYYGVDIAEVSINDARVR-------------------ARNMKRRFK---V 116 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH----T-CSEEEEEESCHHHHHHHHHH-------------------HHTSCCSSE---E
T ss_pred CCCeEEEECCCCCHHHHHHHHC----C-CCEEEEEECCHHHHHHHHHH-------------------HHhcCCCcc---E
Confidence 5689999999999999988874 2 45999999999988877652 222232223 7
Q ss_pred Eeeecchhhhhhh-cCCcEeEEEEcCCCCC-----CcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 235 PFSSGSALTKLCE-WGVVGDLIEIDAGHDF-----NSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 235 ~~~~gda~~~L~~-l~~~fDLIfIDa~h~~-----~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
.+..++..+. +. .+++||+|+......+ ......++.+.++|+|||++++....
T Consensus 117 ~~~~~d~~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 117 FFRAQDSYGR-HMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEEESCTTTS-CCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEECCcccc-ccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 7788876653 22 2578999998754322 33456789999999999999987644
No 175
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.92 E-value=2.2e-09 Score=104.54 Aligned_cols=113 Identities=22% Similarity=0.231 Sum_probs=83.0
Q ss_pred HHHHHHHHhhc-----CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHH
Q 041517 144 GAVFGNLIDKV-----RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQF 218 (327)
Q Consensus 144 g~lL~~L~~~~-----~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~F 218 (327)
..++..+.+.. +..+|||+|||+|..++.+++. +.+|++||+++.+.+.+++
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~------g~~V~gvDis~~al~~A~~----------------- 273 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM------GAEVVGVEDDLASVLSLQK----------------- 273 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT------TCEEEEEESBHHHHHHHHH-----------------
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc------CCEEEEEECCHHHHHHHHH-----------------
Confidence 34556665443 4679999999999999999984 5799999999998888776
Q ss_pred HHHHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCC------CCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 219 LQNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHD------FNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 219 l~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~------~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
|+...+. .+++..+|..+.... +++||+|+.+.... .......++.+.++|+|||++++.-
T Consensus 274 --n~~~~~~-----~v~~~~~D~~~~~~~-~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 274 --GLEANAL-----KAQALHSDVDEALTE-EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp --HHHHTTC-----CCEEEECSTTTTSCT-TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --HHHHcCC-----CeEEEEcchhhcccc-CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 3333332 167778887764332 47899999984321 2344567899999999999888753
No 176
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.92 E-value=1.9e-09 Score=96.98 Aligned_cols=101 Identities=16% Similarity=0.093 Sum_probs=76.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++. + .+...+ +
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~-------------------~--~~~~~~---~ 88 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR------GYRYIALDADAAMLEVFRQK-------------------I--AGVDRK---V 88 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT------TCEEEEEESCHHHHHHHHHH-------------------T--TTSCTT---E
T ss_pred CCCEEEEeCCcCCHHHHHHHHC------CCEEEEEECCHHHHHHHHHH-------------------h--hccCCc---e
Confidence 4679999999999999999873 57999999999988877652 1 011112 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
.+..++..+ ++..+++||+|+.... |..+.....++++.+.|+|||++++.
T Consensus 89 ~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 89 QVVQADARA-IPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEESCTTS-CCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEccccc-CCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 777887754 3333578999998644 33345668899999999999998886
No 177
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.91 E-value=1.5e-09 Score=98.92 Aligned_cols=99 Identities=18% Similarity=0.117 Sum_probs=76.1
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.++.+|||||||+|..+..+++ ++.+|+++|+++.+.+.+++. . .
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~------~~~~v~gvD~s~~~~~~a~~~-------------------~----------~ 77 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN------QGLFVYAVEPSIVMRQQAVVH-------------------P----------Q 77 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT------TTCEEEEECSCHHHHHSSCCC-------------------T----------T
T ss_pred CCCCEEEEEcCcccHHHHHHHh------CCCEEEEEeCCHHHHHHHHhc-------------------c----------C
Confidence 3578999999999999999986 378999999999877655431 0 1
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+.+..++..+ ++..+++||+|+.... |........++++.+.|+ ||.+++.++.
T Consensus 78 ~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 78 VEWFTGYAEN-LALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp EEEECCCTTS-CCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CEEEECchhh-CCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 7777777755 3433579999998753 334666788999999999 9977776665
No 178
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.90 E-value=1.1e-08 Score=90.20 Aligned_cols=137 Identities=11% Similarity=0.004 Sum_probs=86.6
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..+..+|||||||+|..+..+++. .++.+|++||+++.|.+.+.+... ++....+..
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~----~p~~~v~gvD~s~~~l~~~~~~a~---------------~~~~~~~~~---- 81 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQ----NPSRLVVALDADKSRMEKISAKAA---------------AKPAKGGLP---- 81 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHH----CTTEEEEEEESCGGGGHHHHHHHT---------------SCGGGTCCT----
T ss_pred ccCCCEEEEecCCCCHHHHHHHHH----CCCCEEEEEECCHHHHHHHHHHHH---------------HhhhhcCCC----
Confidence 335679999999999999999984 458999999999998874221110 011111221
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCC------CCcHHHHHHHHHccCCCCeEEEEEcCC--CCCCc----------
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHD------FNSAWADINRAWRILRPGGVIFGHDYF--TAADN---------- 294 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~------~~~v~~dl~~~~~lL~pGGvIi~dD~~--~~~~~---------- 294 (327)
.+.+..++..+ ++..... |.|++.-... .......++++.+.|+|||++++.... |.+..
T Consensus 82 ~v~~~~~d~~~-l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (218)
T 3mq2_A 82 NLLYLWATAER-LPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPT 159 (218)
T ss_dssp TEEEEECCSTT-CCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCC
T ss_pred ceEEEecchhh-CCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccc
Confidence 27888888776 4443445 7777543210 011146789999999999999884211 10100
Q ss_pred -hhHHHHHHHHHHHcCCeEEE
Q 041517 295 -RGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 295 -~GV~~Av~~f~~~~gl~v~~ 314 (327)
.-..+.+.......|+++..
T Consensus 160 ~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 160 PDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp HHHHHHHHHHHHHHTTEEEEE
T ss_pred hHHHHHHHHHHHHHcCCCcee
Confidence 11344466677888887653
No 179
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.90 E-value=8.4e-09 Score=98.95 Aligned_cols=111 Identities=9% Similarity=0.064 Sum_probs=81.5
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.++++|||||||+|..+..+++. .++.+++++|. +.+.+.+++. +...+..++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~-------------------~~~~~~~~~--- 230 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQY----NKEVEVTIVDL-PQQLEMMRKQ-------------------TAGLSGSER--- 230 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHH----STTCEEEEEEC-HHHHHHHHHH-------------------HTTCTTGGG---
T ss_pred cCCCEEEEeCCCcCHHHHHHHHh----CCCCEEEEEeC-HHHHHHHHHH-------------------HHhcCcccc---
Confidence 46789999999999999999985 35789999999 8887777653 333333334
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcC-CCCCCc--HHHHHHHHHccCCCCeEEEEEcCCCC
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDA-GHDFNS--AWADINRAWRILRPGGVIFGHDYFTA 291 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~--v~~dl~~~~~lL~pGGvIi~dD~~~~ 291 (327)
|++..+|..+.-..+++.||+|++-. -|.+.+ ....++.+.+.|+|||.|++.|..+.
T Consensus 231 v~~~~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 231 IHGHGANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp EEEEECCCCSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred eEEEEccccccCCCCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 88888886652001236799999753 454433 34668999999999999998887763
No 180
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.90 E-value=6.7e-09 Score=99.37 Aligned_cols=104 Identities=16% Similarity=0.194 Sum_probs=76.8
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..+..+|||||||+|..++.+++. + ..+|++||.++ +.+.+++ ++...++.++
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~----g-~~~V~~vD~s~-~~~~a~~-------------------~~~~~~l~~~-- 100 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQA----G-ARKIYAVEAST-MAQHAEV-------------------LVKSNNLTDR-- 100 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT----T-CSEEEEEECST-HHHHHHH-------------------HHHHTTCTTT--
T ss_pred cCCcCEEEEcCCCccHHHHHHHhC----C-CCEEEEECCHH-HHHHHHH-------------------HHHHcCCCCc--
Confidence 346789999999999999998873 2 46999999995 7666654 3333344444
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCC--C-CCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAG--H-DFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~--h-~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.+..++..+. .+.++||+|+.+.. | ..+.....+..+.++|+|||++++.
T Consensus 101 -v~~~~~d~~~~--~~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 101 -IVVIPGKVEEV--SLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp -EEEEESCTTTC--CCSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred -EEEEEcchhhC--CCCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 88888887663 23468999999853 2 2345667888889999999999854
No 181
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.90 E-value=1.4e-09 Score=96.55 Aligned_cols=100 Identities=12% Similarity=0.034 Sum_probs=74.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. ..+++++|+++.+.+.+++... + +
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~s~~~~~~a~~~~~-------------------------~---~ 85 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKE------FGDTAGLELSEDMLTHARKRLP-------------------------D---A 85 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHH------HSEEEEEESCHHHHHHHHHHCT-------------------------T---C
T ss_pred CCCeEEEecccCCHHHHHHHHh------CCcEEEEeCCHHHHHHHHHhCC-------------------------C---C
Confidence 4689999999999999999985 2489999999988877655210 1 5
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcC--CCCC---CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDA--GHDF---NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa--~h~~---~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+..++..+. +. +++||+|+.-. -+.. ......++.+.+.|+|||+++++++..
T Consensus 86 ~~~~~d~~~~-~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 86 TLHQGDMRDF-RL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp EEEECCTTTC-CC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred EEEECCHHHc-cc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 6667766552 22 57899999432 2211 344677899999999999999987654
No 182
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.89 E-value=3.9e-09 Score=102.20 Aligned_cols=123 Identities=11% Similarity=0.058 Sum_probs=88.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccC----Cc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI----DS 230 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~----~~ 230 (327)
.|++||+||||.|.++..+++. ++ .+|++||+++.+.+.+++++. .+....+. ++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~----~~-~~Vt~VEID~~vie~Ar~~~~----------------~l~~~~l~dp~~~r 246 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL----KP-KMVTMVEIDQMVIDGCKKYMR----------------KTCGDVLDNLKGDC 246 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT----CC-SEEEEEESCHHHHHHHHHHCC----------------C----CCSSSEETT
T ss_pred CCCEEEEEECChhHHHHHHHHC----CC-CEEEEEECCHHHHHHHHHHHH----------------HhccccccccCCCc
Confidence 4789999999999999988763 43 899999999999999988642 11000011 13
Q ss_pred ccceEeeecchhhhhhhc---CCcEeEEEEcCCC-CC---C---cHHHHHHHH----HccCCCCeEEEEEcCCCCCCchh
Q 041517 231 VLPVPFSSGSALTKLCEW---GVVGDLIEIDAGH-DF---N---SAWADINRA----WRILRPGGVIFGHDYFTAADNRG 296 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l---~~~fDLIfIDa~h-~~---~---~v~~dl~~~----~~lL~pGGvIi~dD~~~~~~~~G 296 (327)
+++..+|+.+.+... +++||+|++|... +. + .....++.+ .++|+|||++++.-... ..+.
T Consensus 247 ---v~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~--~~~e 321 (364)
T 2qfm_A 247 ---YQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV--NLTE 321 (364)
T ss_dssp ---EEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET--TCHH
T ss_pred ---EEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc--chHH
Confidence 889999999988753 6889999999754 21 1 124555665 89999999999986654 2345
Q ss_pred HHHHHHH
Q 041517 297 VRRAVNL 303 (327)
Q Consensus 297 V~~Av~~ 303 (327)
+...++.
T Consensus 322 ~~~~~~~ 328 (364)
T 2qfm_A 322 ALSLYEE 328 (364)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555555
No 183
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.89 E-value=5.6e-09 Score=99.12 Aligned_cols=106 Identities=16% Similarity=0.124 Sum_probs=76.4
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
...+..+|||||||+|..++.+++. + ..+|+++|.+ .+.+.+++ ++...++.++
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~----g-~~~v~~vD~s-~~~~~a~~-------------------~~~~~~~~~~- 88 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKH----G-AKHVIGVDMS-SIIEMAKE-------------------LVELNGFSDK- 88 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHT----C-CSEEEEEESS-THHHHHHH-------------------HHHHTTCTTT-
T ss_pred hhcCCCEEEEecCccHHHHHHHHHC----C-CCEEEEEChH-HHHHHHHH-------------------HHHHcCCCCC-
Confidence 4456789999999999999998873 2 4699999999 57777665 3333444445
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCC---CCC-CcHHHHHHHHHccCCCCeEEEEE
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAG---HDF-NSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~---h~~-~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
|.+..++..+. +...++||+|+.+.. ..+ ......+..+.++|+|||+++.+
T Consensus 89 --i~~~~~d~~~~-~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 89 --ITLLRGKLEDV-HLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp --EEEEESCTTTS-CCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred --EEEEECchhhc-cCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 78888887663 221378999998742 112 23446678888999999999844
No 184
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.89 E-value=1.5e-09 Score=100.63 Aligned_cols=106 Identities=11% Similarity=0.068 Sum_probs=78.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc--CCccc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA--IDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~--~~~v~ 232 (327)
++++|||||||+|..+..+++. +.+|+++|+++.+.+.+++.. ...+. ..+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~-------------------~~~~~~~~~~-- 134 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL------GWEVTALELSTSVLAAFRKRL-------------------AEAPADVRDR-- 134 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT------TCCEEEEESCHHHHHHHHHHH-------------------HTSCHHHHTT--
T ss_pred CCCcEEEEeccCCHHHHHHHHc------CCeEEEEECCHHHHHHHHHHH-------------------hhcccccccc--
Confidence 3569999999999999999974 578999999999988877632 11110 022
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcC--CCCCC--cHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDA--GHDFN--SAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa--~h~~~--~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+.+..++..+ ++. +++||+|++.. -|-.. .....++.+.+.|+|||++++..+..
T Consensus 135 -v~~~~~d~~~-~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 135 -CTLVQGDMSA-FAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp -EEEEECBTTB-CCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -eEEEeCchhc-CCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 8888888776 232 68999998642 22222 24678899999999999999988765
No 185
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.89 E-value=2.4e-09 Score=95.95 Aligned_cols=128 Identities=13% Similarity=0.005 Sum_probs=90.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. + ..+++++|+++.+.+.+++... .. .+ +
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~----~-~~~v~~vD~s~~~~~~a~~~~~-------------------~~---~~---~ 142 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTK----L-YATTDLLEPVKHMLEEAKRELA-------------------GM---PV---G 142 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHH----H-CSEEEEEESCHHHHHHHHHHTT-------------------TS---SE---E
T ss_pred CCCEEEEECCCcCHHHHHHHHh----h-cCEEEEEeCCHHHHHHHHHHhc-------------------cC---Cc---e
Confidence 4689999999999999999885 2 5689999999998887766321 10 12 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCC---CcHHHHHHHHHccCCCCeEEEEEcCCCCC----------CchhHHHHH
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDF---NSAWADINRAWRILRPGGVIFGHDYFTAA----------DNRGVRRAV 301 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~---~~v~~dl~~~~~lL~pGGvIi~dD~~~~~----------~~~GV~~Av 301 (327)
.+..++..+ ++..+++||+|+......+ ......++.+.+.|+|||++++.+..... ...--.+.+
T Consensus 143 ~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
T 1xtp_A 143 KFILASMET-ATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHY 221 (254)
T ss_dssp EEEESCGGG-CCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHH
T ss_pred EEEEccHHH-CCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHH
Confidence 777777655 3333478999998654322 23567899999999999999988753210 000123566
Q ss_pred HHHHHHcCCeEE
Q 041517 302 NLFAKINGLKVQ 313 (327)
Q Consensus 302 ~~f~~~~gl~v~ 313 (327)
..+++..|+++.
T Consensus 222 ~~~l~~aGf~~~ 233 (254)
T 1xtp_A 222 KRLFNESGVRVV 233 (254)
T ss_dssp HHHHHHHTCCEE
T ss_pred HHHHHHCCCEEE
Confidence 777778888765
No 186
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.88 E-value=2.5e-09 Score=96.11 Aligned_cols=100 Identities=17% Similarity=-0.001 Sum_probs=77.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++.. ++.+++++|+++.+.+.+++.. .+ +
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~----~~~~v~~~D~s~~~~~~a~~~~-------------------------~~---~ 80 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRY----GVNVITGIDSDDDMLEKAADRL-------------------------PN---T 80 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHH----CTTSEEEEESCHHHHHHHHHHS-------------------------TT---S
T ss_pred CCCEEEEecCcCCHHHHHHHHhC----CCCEEEEEECCHHHHHHHHHhC-------------------------CC---c
Confidence 46799999999999999999852 4789999999998887765421 11 6
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
.+..++..+. + .+.+||+|+.... |..+.....++.+.+.|+|||++++...
T Consensus 81 ~~~~~d~~~~-~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 81 NFGKADLATW-K-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEEECCTTTC-C-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEEECChhhc-C-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 6777776653 3 4578999998654 3334567889999999999999998764
No 187
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.87 E-value=2.4e-09 Score=96.47 Aligned_cols=103 Identities=15% Similarity=-0.016 Sum_probs=70.8
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCC-CCChhhh---hhhcccCccccchHHHHHHHHHHhhhccCCc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDF-RGWPGFR---DKFKEIPMVNGNVLLYFQFLQNVIYQNAIDS 230 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~-~~~~~~A---~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~ 230 (327)
+..+|||||||+|..++.+|+. .++.+|++||++ +.|.+.| ++. +...+..
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~----~~~~~v~GvD~s~~~ml~~A~~A~~~-------------------~~~~~~~-- 78 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAIN----DQNTFYIGIDPVKENLFDISKKIIKK-------------------PSKGGLS-- 78 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHT----CTTEEEEEECSCCGGGHHHHHHHTSC-------------------GGGTCCS--
T ss_pred CCCEEEEEeccCcHHHHHHHHh----CCCCEEEEEeCCHHHHHHHHHHHHHH-------------------HHHcCCC--
Confidence 4678999999999999999973 458899999999 5665554 442 2222221
Q ss_pred ccceEeeecchhhhhhh-cCCcEeEEEEcCCCCC------CcHHHHHHHHHccCCCCeEEEE
Q 041517 231 VLPVPFSSGSALTKLCE-WGVVGDLIEIDAGHDF------NSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~-l~~~fDLIfIDa~h~~------~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
.+.+..+++.+. +. ....+|.|++.-.... ......++++.++|||||++++
T Consensus 79 --~v~~~~~d~~~l-~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 79 --NVVFVIAAAESL-PFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp --SEEEECCBTTBC-CGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred --CeEEEEcCHHHh-hhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 277888877654 32 2366888877532100 0112568999999999999988
No 188
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.87 E-value=7.5e-09 Score=98.15 Aligned_cols=108 Identities=17% Similarity=0.109 Sum_probs=81.2
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
+.+|||||||+|..+..+++. .++.+++++|. +.+.+.+++. +...+..++ |+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~-------------------~~~~~~~~~---v~ 232 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRR----HPQLTGQIWDL-PTTRDAARKT-------------------IHAHDLGGR---VE 232 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHH----CTTCEEEEEEC-GGGHHHHHHH-------------------HHHTTCGGG---EE
T ss_pred CCEEEEeCCCcCHHHHHHHHh----CCCCeEEEEEC-HHHHHHHHHH-------------------HHhcCCCCc---eE
Confidence 789999999999999999985 34789999999 7788777652 333333344 88
Q ss_pred eeecchhhhhhhcCCcEeEEEEcC-CCCCCc--HHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 236 FSSGSALTKLCEWGVVGDLIEIDA-GHDFNS--AWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~--v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+..+|..+..+..+..||+|++-. -|.+.+ ....++.+.+.|+|||.+++.|...
T Consensus 233 ~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 233 FFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp EEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred EEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 888887664222456799999754 343443 3678999999999999999888765
No 189
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.87 E-value=6e-09 Score=101.46 Aligned_cols=106 Identities=18% Similarity=0.198 Sum_probs=78.5
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..+.++|||||||+|..++..|++ + -.+|++||.++ +.+.|++ ++...|+.++
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~a----G-A~~V~ave~s~-~~~~a~~-------------------~~~~n~~~~~-- 133 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQA----G-ARRVYAVEASA-IWQQARE-------------------VVRFNGLEDR-- 133 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT----T-CSEEEEEECST-THHHHHH-------------------HHHHTTCTTT--
T ss_pred hcCCCEEEEeCCCccHHHHHHHHh----C-CCEEEEEeChH-HHHHHHH-------------------HHHHcCCCce--
Confidence 357889999999999999988874 3 35899999985 7777765 4445566666
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEE---cCCCCCCcHHH-HHHHHHccCCCCeEEEEEcC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEI---DAGHDFNSAWA-DINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfI---Da~h~~~~v~~-dl~~~~~lL~pGGvIi~dD~ 288 (327)
|.+..++..+. .+++++|+|+. +....++.... .+....++|+|||+|+-+-+
T Consensus 134 -i~~i~~~~~~~--~lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~a 190 (376)
T 4hc4_A 134 -VHVLPGPVETV--ELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASA 190 (376)
T ss_dssp -EEEEESCTTTC--CCSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEE
T ss_pred -EEEEeeeeeee--cCCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccc
Confidence 88888887763 44679999986 33444454444 45566689999999986544
No 190
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.87 E-value=3.7e-09 Score=97.98 Aligned_cols=111 Identities=9% Similarity=-0.043 Sum_probs=74.5
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEE--EEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh-ccCCccc
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQI--LCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ-NAIDSVL 232 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V--~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~-g~~~~v~ 232 (327)
+.+|||||||+|..+..+++.+....++.++ +++|++++|.+.+++.. ... +. .. +
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~-------------------~~~~~~-~~-v 111 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELV-------------------AKTSNL-EN-V 111 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHH-------------------HTCSSC-TT-E
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHH-------------------HhccCC-Cc-c
Confidence 4689999999998887665443222345654 99999999998876632 111 11 11 1
Q ss_pred ceEeeecchhhhhh-----hcCCcEeEEEEc-CCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 233 PVPFSSGSALTKLC-----EWGVVGDLIEID-AGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 233 ~V~~~~gda~~~L~-----~l~~~fDLIfID-a~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
.+.+..+++.+... ..+++||+|+.- +-|..++....++++.++|||||++++-.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 112 KFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp EEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 13444566554321 125789999975 44545667789999999999999988754
No 191
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.86 E-value=1.9e-08 Score=96.70 Aligned_cols=106 Identities=10% Similarity=0.064 Sum_probs=81.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .++.+++++|. +.+.+.+++ ++...++.++ |
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~-------------------~~~~~~l~~~---v 254 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDA----FPGLRGTLLER-PPVAEEARE-------------------LLTGRGLADR---C 254 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHHHHHH-------------------HHHHTTCTTT---E
T ss_pred cCcEEEEeCCCccHHHHHHHHH----CCCCeEEEEcC-HHHHHHHHH-------------------hhhhcCcCCc---e
Confidence 4689999999999999999985 45789999999 888877765 3333444455 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcC-CCCCCcH--HHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDA-GHDFNSA--WADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~v--~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
++..+|..+.++ ..||+|++-. -|.+++. ...++.+.+.|+|||.+++.|...
T Consensus 255 ~~~~~d~~~~~p---~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 255 EILPGDFFETIP---DGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp EEEECCTTTCCC---SSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred EEeccCCCCCCC---CCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 888888764333 3799999754 3444432 367999999999999999988776
No 192
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.86 E-value=2.3e-09 Score=97.05 Aligned_cols=144 Identities=15% Similarity=0.041 Sum_probs=83.7
Q ss_pred HHHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHH----HHH
Q 041517 145 AVFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLL----YFQ 217 (327)
Q Consensus 145 ~lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~----~~~ 217 (327)
.++..+++.. ++.+|||+|||+|..++.+++.++ .++.+|+++|+++.+.+.|+++.......+.... ..+
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~--~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~ 115 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHR--RSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQ 115 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTG--GGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhc--cCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhh
Confidence 3555554443 457999999999999999998521 2367999999999999988875421100000000 000
Q ss_pred --------HH------HHHhh-hccCCcccceEeeecchhhhhhh----cCCcEeEEEEcCCC----C------CCcHHH
Q 041517 218 --------FL------QNVIY-QNAIDSVLPVPFSSGSALTKLCE----WGVVGDLIEIDAGH----D------FNSAWA 268 (327)
Q Consensus 218 --------Fl------~nv~~-~g~~~~v~~V~~~~gda~~~L~~----l~~~fDLIfIDa~h----~------~~~v~~ 268 (327)
+. .++.. ....+...|..+..+|..+.++. .+.+||+|+.+--. . ......
T Consensus 116 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~ 195 (250)
T 1o9g_A 116 SERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAG 195 (250)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHH
T ss_pred hhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHH
Confidence 00 00110 00001112233777776664421 23589999987321 1 022346
Q ss_pred HHHHHHccCCCCeEEEEEcCCC
Q 041517 269 DINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 269 dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.++.+.++|+|||++++.+..+
T Consensus 196 ~l~~~~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 196 LLRSLASALPAHAVIAVTDRSR 217 (250)
T ss_dssp HHHHHHHHSCTTCEEEEEESSS
T ss_pred HHHHHHHhcCCCcEEEEeCcch
Confidence 7889999999999999865544
No 193
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.85 E-value=5e-09 Score=97.16 Aligned_cols=103 Identities=10% Similarity=-0.036 Sum_probs=70.8
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
...+..+|||||||+|..++.+|+. +.+|++||.++.|.+.+++... .. .
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~------g~~V~gvD~S~~ml~~Ar~~~~-------------------~~-----~ 91 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALER------GASVTVFDFSQRMCDDLAEALA-------------------DR-----C 91 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHTS-------------------SS-----C
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHH-------------------hc-----c
Confidence 3345679999999999999999984 6799999999999998876432 10 1
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCCCC-C--CcHHHHHHHHHccCCCCeEEEEE
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAGHD-F--NSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~-~--~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.+.+...+. +.....+++||+|+.+.... . ......++.+.++| |||++++.
T Consensus 92 v~~~~~~~~~-~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 92 VTIDLLDITA-EIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp CEEEECCTTS-CCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred ceeeeeeccc-ccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 1122222211 00012357899999986532 2 33456788999999 99998875
No 194
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.85 E-value=3.7e-09 Score=94.73 Aligned_cols=113 Identities=9% Similarity=-0.002 Sum_probs=79.8
Q ss_pred HHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 146 VFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 146 lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.+..+.... +..+|||||||+|..+..+++. ..+|+++|+++.+.+.+++...
T Consensus 46 ~~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~------~~~v~gvD~s~~~~~~a~~~~~-------------------- 99 (245)
T 3ggd_A 46 DLPRFELLFNPELPLIDFACGNGTQTKFLSQF------FPRVIGLDVSKSALEIAAKENT-------------------- 99 (245)
T ss_dssp HHHHHTTTSCTTSCEEEETCTTSHHHHHHHHH------SSCEEEEESCHHHHHHHHHHSC--------------------
T ss_pred HHHHHhhccCCCCeEEEEcCCCCHHHHHHHHh------CCCEEEEECCHHHHHHHHHhCc--------------------
Confidence 344444333 3578999999999999999985 3389999999998887765321
Q ss_pred hccCCcccceEeeecchhhhhhh--c--CCcEeEEEEcCCCC-CC--cHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCE--W--GVVGDLIEIDAGHD-FN--SAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~--l--~~~fDLIfIDa~h~-~~--~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
..+ +.+..++..+.-.. + +.+||+|+...... .+ .....++.+.+.|+|||++++-++..
T Consensus 100 ---~~~---~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 100 ---AAN---ISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp ---CTT---EEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred ---ccC---ceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 011 77777776552111 1 13489999886432 33 45688999999999999988877764
No 195
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.85 E-value=2.3e-08 Score=94.16 Aligned_cols=127 Identities=16% Similarity=0.174 Sum_probs=79.1
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
...+|||||||+|..|.++++. + .++|++||++++|.+.+.+... ++...... . +
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~----g-a~~V~aVDvs~~mL~~a~r~~~----------------rv~~~~~~-n---i 139 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN----G-AKLVYAVDVGTNQLVWKLRQDD----------------RVRSMEQY-N---F 139 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT----T-CSEEEEECSSSSCSCHHHHTCT----------------TEEEECSC-C---G
T ss_pred cccEEEecCCCccHHHHHHHhC----C-CCEEEEEECCHHHHHHHHHhCc----------------ccceeccc-C---c
Confidence 3569999999999999999873 2 4699999999999986432100 00000000 0 1
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE---cCCCCCC---------chh----HH
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH---DYFTAAD---------NRG----VR 298 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d---D~~~~~~---------~~G----V~ 298 (327)
+.... +.++ ..+||+|.+|.... .....+.++.++|+|||.+++- ++-.... .+. +.
T Consensus 140 ~~l~~---~~l~--~~~fD~v~~d~sf~--sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~ 212 (291)
T 3hp7_A 140 RYAEP---VDFT--EGLPSFASIDVSFI--SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVL 212 (291)
T ss_dssp GGCCG---GGCT--TCCCSEEEECCSSS--CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHH
T ss_pred eecch---hhCC--CCCCCEEEEEeeHh--hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHH
Confidence 11111 1122 13499999997643 3457899999999999988775 2211110 011 44
Q ss_pred HHHHHHHHHcCCeEE
Q 041517 299 RAVNLFAKINGLKVQ 313 (327)
Q Consensus 299 ~Av~~f~~~~gl~v~ 313 (327)
+-+.+++...|+.+.
T Consensus 213 ~~v~~~~~~~Gf~v~ 227 (291)
T 3hp7_A 213 ETVTAFAVDYGFSVK 227 (291)
T ss_dssp HHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHCCCEEE
Confidence 556677788898875
No 196
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.84 E-value=5e-09 Score=93.30 Aligned_cols=140 Identities=10% Similarity=-0.002 Sum_probs=90.9
Q ss_pred HHHHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHH
Q 041517 144 GAVFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNV 222 (327)
Q Consensus 144 g~lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv 222 (327)
..|+..+...+ .+.+|||+|||+|-.++.++. ..++.+++++|+++.|.+++++ |+
T Consensus 37 d~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~----~~p~a~~~A~Di~~~~leiar~-------------------~~ 93 (200)
T 3fzg_A 37 NDFYTYVFGNIKHVSSILDFGCGFNPLALYQWN----ENEKIIYHAYDIDRAEIAFLSS-------------------II 93 (200)
T ss_dssp HHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHC----SSCCCEEEEECSCHHHHHHHHH-------------------HH
T ss_pred HHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHh----cCCCCEEEEEeCCHHHHHHHHH-------------------HH
Confidence 34555544443 489999999999999999986 4567899999999999999887 44
Q ss_pred hhhccCCcccceEeeecchhhhhhhcCCcEeEEEEc-CCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC-CCCchh----
Q 041517 223 IYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEID-AGHDFNSAWADINRAWRILRPGGVIFGHDYFT-AADNRG---- 296 (327)
Q Consensus 223 ~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfID-a~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~-~~~~~G---- 296 (327)
...|..++ +++ .+..+. ..+++||+|..= .-|--......+..++..|+|||++|--+... ...-+|
T Consensus 94 ~~~g~~~~---v~~--~d~~~~--~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~ 166 (200)
T 3fzg_A 94 GKLKTTIK---YRF--LNKESD--VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEEN 166 (200)
T ss_dssp HHSCCSSE---EEE--ECCHHH--HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCC
T ss_pred HhcCCCcc---EEE--eccccc--CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhh
Confidence 44454433 555 333332 235789999853 22211111123568999999999999888332 122334
Q ss_pred HHHHHHHHHHHcCCeEE
Q 041517 297 VRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 297 V~~Av~~f~~~~gl~v~ 313 (327)
..+-++.+..+....++
T Consensus 167 Y~~~~~~~~~~~~~~~~ 183 (200)
T 3fzg_A 167 YQLWFESFTKGWIKILD 183 (200)
T ss_dssp HHHHHHHHTTTTSCEEE
T ss_pred HHHHHHHhccCcceeee
Confidence 55666666655555443
No 197
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.84 E-value=9.8e-09 Score=87.96 Aligned_cols=123 Identities=9% Similarity=0.057 Sum_probs=83.9
Q ss_pred HHHHHHHHhh--cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 144 GAVFGNLIDK--VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 144 g~lL~~L~~~--~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
..++.. ++. .++++|||+|||+|..++.+++. . +|+++|+++.+.+.
T Consensus 11 ~~l~~~-l~~~~~~~~~vLD~GcG~G~~~~~l~~~------~-~v~gvD~s~~~~~~----------------------- 59 (170)
T 3q87_B 11 YTLMDA-LEREGLEMKIVLDLGTSTGVITEQLRKR------N-TVVSTDLNIRALES----------------------- 59 (170)
T ss_dssp HHHHHH-HHHHTCCSCEEEEETCTTCHHHHHHTTT------S-EEEEEESCHHHHHT-----------------------
T ss_pred HHHHHH-HHhhcCCCCeEEEeccCccHHHHHHHhc------C-cEEEEECCHHHHhc-----------------------
Confidence 344444 444 56789999999999999999873 3 99999998876643
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC----------CcHHHHHHHHHccCCCCeEEEEEcCCCC
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF----------NSAWADINRAWRILRPGGVIFGHDYFTA 291 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~----------~~v~~dl~~~~~lL~pGGvIi~dD~~~~ 291 (327)
..+ +++..++..+.++ +++||+|+.+..... ......++.+.+.+ |||++++.....
T Consensus 60 ------~~~---~~~~~~d~~~~~~--~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~- 126 (170)
T 3q87_B 60 ------HRG---GNLVRADLLCSIN--QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA- 126 (170)
T ss_dssp ------CSS---SCEEECSTTTTBC--GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-
T ss_pred ------ccC---CeEEECChhhhcc--cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-
Confidence 011 5667777766333 278999999743211 01246778888888 999998866543
Q ss_pred CCchhHHHHHHHHHHHcCCeEEE
Q 041517 292 ADNRGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 292 ~~~~GV~~Av~~f~~~~gl~v~~ 314 (327)
.-.+.+..++++.|+++..
T Consensus 127 ----~~~~~l~~~l~~~gf~~~~ 145 (170)
T 3q87_B 127 ----NRPKEVLARLEERGYGTRI 145 (170)
T ss_dssp ----GCHHHHHHHHHHTTCEEEE
T ss_pred ----CCHHHHHHHHHHCCCcEEE
Confidence 1234556666777887543
No 198
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.83 E-value=8.4e-09 Score=91.64 Aligned_cols=108 Identities=17% Similarity=0.146 Sum_probs=76.7
Q ss_pred HHHHHHhhcC-CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 146 VFGNLIDKVR-PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 146 lL~~L~~~~~-p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.+..+.+..+ ..+|||||||+|..+..+++. .+++++|+++.+.+.+++. ...
T Consensus 23 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-------~~v~~vD~s~~~~~~a~~~-------------------~~~ 76 (243)
T 3d2l_A 23 WVAWVLEQVEPGKRIADIGCGTGTATLLLADH-------YEVTGVDLSEEMLEIAQEK-------------------AME 76 (243)
T ss_dssp HHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT-------SEEEEEESCHHHHHHHHHH-------------------HHH
T ss_pred HHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC-------CeEEEEECCHHHHHHHHHh-------------------hhh
Confidence 4444444444 479999999999999888761 7999999999998877663 221
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC--CCC---CcHHHHHHHHHccCCCCeEEEEE
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG--HDF---NSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~--h~~---~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
.+ .+ +.+..++..+. + ..++||+|++..+ +.. ......++.+.++|+|||+++++
T Consensus 77 ~~--~~---~~~~~~d~~~~-~-~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 77 TN--RH---VDFWVQDMREL-E-LPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp TT--CC---CEEEECCGGGC-C-CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cC--Cc---eEEEEcChhhc-C-CCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 12 12 67777776553 2 2478999998642 211 34556789999999999999984
No 199
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.82 E-value=3.3e-09 Score=92.26 Aligned_cols=115 Identities=10% Similarity=0.005 Sum_probs=80.4
Q ss_pred HHHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 145 AVFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 145 ~lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
.+...+.+.. +..+|||||||+|..+..+++. +. .+++++|+++.+.+.+++...
T Consensus 31 ~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~----~~-~~v~~~D~s~~~~~~a~~~~~------------------- 86 (215)
T 2pxx_A 31 SFRALLEPELRPEDRILVLGCGNSALSYELFLG----GF-PNVTSVDYSSVVVAAMQACYA------------------- 86 (215)
T ss_dssp HHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHT----TC-CCEEEEESCHHHHHHHHHHTT-------------------
T ss_pred HHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHc----CC-CcEEEEeCCHHHHHHHHHhcc-------------------
Confidence 3444454443 4579999999999999999984 32 289999999998887765321
Q ss_pred hhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCC-------C---------CCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGH-------D---------FNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h-------~---------~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
. ..+ +.+..++..+. +..+++||+|+..... . .......++.+.++|+|||++++.+
T Consensus 87 ~---~~~---i~~~~~d~~~~-~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 87 H---VPQ---LRWETMDVRKL-DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp T---CTT---CEEEECCTTSC-CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c---CCC---cEEEEcchhcC-CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 1 012 67777776552 3234789999975321 0 1234577899999999999999988
Q ss_pred CCC
Q 041517 288 YFT 290 (327)
Q Consensus 288 ~~~ 290 (327)
+..
T Consensus 160 ~~~ 162 (215)
T 2pxx_A 160 SAA 162 (215)
T ss_dssp SCC
T ss_pred CCC
Confidence 765
No 200
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.81 E-value=3.2e-09 Score=96.51 Aligned_cols=99 Identities=11% Similarity=0.054 Sum_probs=72.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++... . .
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~------------------------~----~ 99 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER------GFEVVLVDPSKEMLEVAREKGV------------------------K----N 99 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHHTC------------------------S----C
T ss_pred CCCeEEEeCCCcCHHHHHHHHc------CCeEEEEeCCHHHHHHHHhhcC------------------------C----C
Confidence 5789999999999999999873 5799999999998887765211 0 1
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC--CCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG--HDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~--h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+..++..+ ++..+++||+|++... |-.......++++.+.|+|||++++....
T Consensus 100 -~~~~d~~~-~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 100 -VVEAKAED-LPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp -EEECCTTS-CCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -EEECcHHH-CCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 33444433 2322478999998642 22234678899999999999999987655
No 201
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.81 E-value=1.1e-08 Score=97.44 Aligned_cols=133 Identities=12% Similarity=-0.010 Sum_probs=88.8
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
..++|||+|||+|..++.+++. ++..+|+++|.++.+.+.+++ |+...+.. +
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~----~~~~~v~~vD~s~~~l~~a~~-------------------~~~~~~~~-----~ 247 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARH----SPKIRLTLCDVSAPAVEASRA-------------------TLAANGVE-----G 247 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHH----CTTCBCEEEESBHHHHHHHHH-------------------HHHHTTCC-----C
T ss_pred CCCeEEEecCccCHHHHHHHHH----CCCCEEEEEECCHHHHHHHHH-------------------HHHHhCCC-----C
Confidence 4679999999999999999985 456799999999998888776 33322322 4
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCC------CCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHc
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHD------FNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKIN 308 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~------~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~ 308 (327)
++..++..+. .+++||+|+.+.... .......++.+.+.|+|||++++..... . .....++....
T Consensus 248 ~~~~~d~~~~---~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~-~---~~~~~l~~~f~-- 318 (343)
T 2pjd_A 248 EVFASNVFSE---VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF-L---PYPDVLDETFG-- 318 (343)
T ss_dssp EEEECSTTTT---CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT-S---SHHHHHHHHHS--
T ss_pred EEEEcccccc---ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC-C---CcHHHHHHhcC--
Confidence 4556665542 257899999975432 1234567899999999999888754433 1 22334444433
Q ss_pred CCeEEEccceEEEecc
Q 041517 309 GLKVQIDGQHWVIHSA 324 (327)
Q Consensus 309 gl~v~~~gq~w~i~~~ 324 (327)
.++.......+.|.+.
T Consensus 319 ~~~~~~~~~gf~v~~~ 334 (343)
T 2pjd_A 319 FHEVIAQTGRFKVYRA 334 (343)
T ss_dssp CCEEEEECSSEEEEEE
T ss_pred ceEEEeeCCCEEEEEE
Confidence 3454445555655544
No 202
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.81 E-value=1e-08 Score=90.00 Aligned_cols=119 Identities=13% Similarity=0.018 Sum_probs=80.8
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.++..+....+..+|||||||+|..+..++ .+++++|+++..
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~---------~~v~~~D~s~~~----------------------------- 98 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSIR---------NPVHCFDLASLD----------------------------- 98 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHCC---------SCEEEEESSCSS-----------------------------
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHhh---------ccEEEEeCCCCC-----------------------------
Confidence 355555444456899999999999876652 579999998861
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHH
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLF 304 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f 304 (327)
+.+..++..+ ++..+++||+|+.............++.+.+.|+|||++++.++... +. -.+.+..+
T Consensus 99 ---------~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~--~~-~~~~~~~~ 165 (215)
T 2zfu_A 99 ---------PRVTVCDMAQ-VPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSR--FE-DVRTFLRA 165 (215)
T ss_dssp ---------TTEEESCTTS-CSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECGGG--CS-CHHHHHHH
T ss_pred ---------ceEEEecccc-CCCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcCCC--CC-CHHHHHHH
Confidence 1122233222 22224689999976543346677889999999999999999887642 11 23556666
Q ss_pred HHHcCCeEEE
Q 041517 305 AKINGLKVQI 314 (327)
Q Consensus 305 ~~~~gl~v~~ 314 (327)
++..|+++..
T Consensus 166 l~~~Gf~~~~ 175 (215)
T 2zfu_A 166 VTKLGFKIVS 175 (215)
T ss_dssp HHHTTEEEEE
T ss_pred HHHCCCEEEE
Confidence 7778887653
No 203
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.81 E-value=9.5e-09 Score=95.99 Aligned_cols=114 Identities=14% Similarity=0.145 Sum_probs=76.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. ...+++++|+++.+.+.+++... .............+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-----~~~~v~gvD~s~~~l~~a~~~~~----------------~~~~~~~~~~~~~~ 92 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-----RINKLVCTDIADVSVKQCQQRYE----------------DMKNRRDSEYIFSA 92 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-----TCSEEEEEESCHHHHHHHHHHHH----------------HHHSSSCC-CCCEE
T ss_pred CCCEEEEECCCCcHHHHHHHhc-----CCCEEEEEeCCHHHHHHHHHHHH----------------HhhhcccccccceE
Confidence 5689999999999999998872 36799999999999887765321 10000000000127
Q ss_pred Eeeecchhhh-----hhhcCCcEeEEEEcCCCCC-----CcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 235 PFSSGSALTK-----LCEWGVVGDLIEIDAGHDF-----NSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 235 ~~~~gda~~~-----L~~l~~~fDLIfIDa~h~~-----~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
.+..+|..+. ++..+++||+|+......+ +.....++.+.+.|+|||++++....
T Consensus 93 ~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 93 EFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp EEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred EEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 7888877653 1111358999997654322 22357899999999999999987654
No 204
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.80 E-value=1.6e-08 Score=95.10 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=79.4
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|||||||+|..+..+++. .++.+++++|. +.+.+.+++. +...+..++ |.+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~-------------------~~~~~~~~~---v~~ 221 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQA----EPSARGVMLDR-EGSLGVARDN-------------------LSSLLAGER---VSL 221 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHH----CTTCEEEEEEC-TTCTHHHHHH-------------------THHHHHTTS---EEE
T ss_pred CEEEEeCCCchHHHHHHHHH----CCCCEEEEeCc-HHHHHHHHHH-------------------HhhcCCCCc---EEE
Confidence 79999999999999999985 34789999999 9999888763 222233334 888
Q ss_pred eecchhhhhhhcCCcEeEEEEcCC-CCCCc--HHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 237 SSGSALTKLCEWGVVGDLIEIDAG-HDFNS--AWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 237 ~~gda~~~L~~l~~~fDLIfIDa~-h~~~~--v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
..++..+. ++..||+|++... |.+.+ ....++.+.+.|+|||.+++.|...
T Consensus 222 ~~~d~~~~---~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 222 VGGDMLQE---VPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp EESCTTTC---CCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred ecCCCCCC---CCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 88887663 2357999998643 43433 3377899999999999999888765
No 205
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.79 E-value=5.9e-09 Score=91.11 Aligned_cols=99 Identities=15% Similarity=0.067 Sum_probs=73.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+ + ..+++++|+++.+.+.+++.. .. +
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-------~-~~~v~~vD~s~~~~~~a~~~~-------------------------~~---~ 79 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-------P-YPQKVGVEPSEAMLAVGRRRA-------------------------PE---A 79 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-------C-CSEEEEECCCHHHHHHHHHHC-------------------------TT---S
T ss_pred CCCeEEEECCCCCHhHHhC-------C-CCeEEEEeCCHHHHHHHHHhC-------------------------CC---c
Confidence 5689999999999987665 1 238999999998887765521 01 5
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+..++..+ ++..+++||+|+.... +..+.....++++.++|+|||++++.+...
T Consensus 80 ~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 80 TWVRAWGEA-LPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp EEECCCTTS-CCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEEccccc-CCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 566666544 3333468999998754 333456788999999999999999987765
No 206
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.79 E-value=1e-08 Score=96.68 Aligned_cols=105 Identities=17% Similarity=0.130 Sum_probs=80.5
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||||||+|..+..+++. .++.+++++|. +.+.+.+++ ++...+..++ |+
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~-------------------~~~~~~~~~~---v~ 222 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTA----HEDLSGTVLDL-QGPASAAHR-------------------RFLDTGLSGR---AQ 222 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHHHHHH-------------------HHHHTTCTTT---EE
T ss_pred CCEEEEeCCChhHHHHHHHHH----CCCCeEEEecC-HHHHHHHHH-------------------hhhhcCcCcC---eE
Confidence 579999999999999999985 34789999999 888877765 3333344445 88
Q ss_pred eeecchhhhhhhcCCcEeEEEEcC-CCCCCc--HHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 236 FSSGSALTKLCEWGVVGDLIEIDA-GHDFNS--AWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~--v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+..+|..+.++ ..||+|++-. -|.+++ ....++++.+.|+|||.+++.|...
T Consensus 223 ~~~~d~~~~~p---~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 223 VVVGSFFDPLP---AGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp EEECCTTSCCC---CSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred EecCCCCCCCC---CCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 88888764333 3799999753 344444 3678999999999999999988776
No 207
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.79 E-value=1.7e-08 Score=94.68 Aligned_cols=108 Identities=17% Similarity=0.216 Sum_probs=80.2
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.+..+|||||||+|..+..+++. . ++.+++++|++ .+.+.+++ ++...+..++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~---~-p~~~~~~~D~~-~~~~~a~~-------------------~~~~~~~~~~--- 216 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQH---N-PNAEIFGVDWA-SVLEVAKE-------------------NARIQGVASR--- 216 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHH---C-TTCEEEEEECH-HHHHHHHH-------------------HHHHHTCGGG---
T ss_pred CCCCEEEEECCCcCHHHHHHHHH---C-CCCeEEEEecH-HHHHHHHH-------------------HHHhcCCCcc---
Confidence 35689999999999999999985 3 47899999999 88877765 3333343334
Q ss_pred eEeeecchhhhhhhcCCcEeEEEE-cCCCCC--CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEI-DAGHDF--NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfI-Da~h~~--~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+.+..++..+. .....||+|++ +.-|.. +.....++.+.+.|+|||.+++.|...
T Consensus 217 v~~~~~d~~~~--~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 217 YHTIAGSAFEV--DYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp EEEEESCTTTS--CCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred eEEEecccccC--CCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 88888886652 22345999998 444444 334578899999999999888877765
No 208
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.78 E-value=2.6e-08 Score=95.17 Aligned_cols=123 Identities=17% Similarity=0.117 Sum_probs=88.6
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.+..+|||+|||+|..++.+|.. .+++.+++++|+++.+.+.|++ |+...|.. .
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~---~~~~~~v~g~Di~~~~i~~a~~-------------------n~~~~g~~-~--- 255 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAAST---LGPTSPVYAGDLDEKRLGLARE-------------------AALASGLS-W--- 255 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHH---HCTTSCEEEEESCHHHHHHHHH-------------------HHHHTTCT-T---
T ss_pred CCCCEEEeCCCCcCHHHHHHHHh---hCCCceEEEEECCHHHHHHHHH-------------------HHHHcCCC-c---
Confidence 34579999999999999999985 2357899999999999988876 55555653 3
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCC-----Cc----HHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHH
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDF-----NS----AWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLF 304 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-----~~----v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f 304 (327)
+.+..+|+.+. +.....||+|+.|..... .. ....++.+.++|+|||.+++-... ...++.+
T Consensus 256 i~~~~~D~~~~-~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~--------~~~~~~~ 326 (354)
T 3tma_A 256 IRFLRADARHL-PRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR--------PALLKRA 326 (354)
T ss_dssp CEEEECCGGGG-GGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC--------HHHHHHH
T ss_pred eEEEeCChhhC-ccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC--------HHHHHHH
Confidence 88899998774 333456899999853211 01 135678889999999998885443 2345555
Q ss_pred HHHcCCeE
Q 041517 305 AKINGLKV 312 (327)
Q Consensus 305 ~~~~gl~v 312 (327)
.+ .|+++
T Consensus 327 ~~-~g~~~ 333 (354)
T 3tma_A 327 LP-PGFAL 333 (354)
T ss_dssp CC-TTEEE
T ss_pred hh-cCcEE
Confidence 55 66554
No 209
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.77 E-value=1.9e-08 Score=95.85 Aligned_cols=101 Identities=16% Similarity=0.075 Sum_probs=80.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|..++. |+. ..+|+++|.++.+.+.+++ |+...+..++ +
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~------~~~V~~vD~s~~ai~~a~~-------------------n~~~n~l~~~---v 245 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKN------AKKIYAIDINPHAIELLKK-------------------NIKLNKLEHK---I 245 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTT------SSEEEEEESCHHHHHHHHH-------------------HHHHTTCTTT---E
T ss_pred CCCEEEEccCccCHHHHh-ccC------CCEEEEEECCHHHHHHHHH-------------------HHHHcCCCCc---E
Confidence 567999999999999999 752 6899999999999888776 4444444334 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTA 291 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~ 291 (327)
.+..+|+.+.+ ..||+|++|..... ...++.+.++|+|||++++.++...
T Consensus 246 ~~~~~D~~~~~----~~fD~Vi~dpP~~~---~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 246 IPILSDVREVD----VKGNRVIMNLPKFA---HKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp EEEESCGGGCC----CCEEEEEECCTTTG---GGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred EEEECChHHhc----CCCcEEEECCcHhH---HHHHHHHHHHcCCCCEEEEEEeecC
Confidence 88899988754 68999999864322 2678889999999999999888763
No 210
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.76 E-value=6.7e-08 Score=89.54 Aligned_cols=107 Identities=10% Similarity=0.023 Sum_probs=77.3
Q ss_pred CCCEEEEEcCcc---hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 155 RPRVIIEVGSFL---GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 155 ~p~~VLEIGt~~---G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
+..+|||||||+ |..+..+++ ..++.+|++||.++.|.+.+++. +.. .++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~----~~p~~~v~~vD~sp~~l~~Ar~~-------------------~~~---~~~- 129 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQS----VNPDARVVYVDIDPMVLTHGRAL-------------------LAK---DPN- 129 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHH----HCTTCEEEEEESSHHHHHHHHHH-------------------HTT---CTT-
T ss_pred CCCEEEEECCCCCCCChHHHHHHH----hCCCCEEEEEECChHHHHHHHHh-------------------cCC---CCC-
Confidence 457999999999 987766555 34578999999999999888763 211 122
Q ss_pred cceEeeecchhhh--h-------hhcC-CcEeEEEEcCC-CCCC--cHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 232 LPVPFSSGSALTK--L-------CEWG-VVGDLIEIDAG-HDFN--SAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 232 ~~V~~~~gda~~~--L-------~~l~-~~fDLIfIDa~-h~~~--~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+.+..+|..+. + ..++ .+||+|++-+. |-.+ .....++++.+.|+|||++++.+...
T Consensus 130 --v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 130 --TAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp --EEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred --eEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 77777776532 1 1122 47899997653 3222 36788999999999999999999875
No 211
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.76 E-value=5.1e-08 Score=92.97 Aligned_cols=106 Identities=14% Similarity=0.108 Sum_probs=79.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .++.+++++|+ +.+.+.+++ ++...+..++ +
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~-------------------~~~~~~~~~~---v 242 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKH----FPELDSTILNL-PGAIDLVNE-------------------NAAEKGVADR---M 242 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHH----CTTCEEEEEEC-GGGHHHHHH-------------------HHHHTTCTTT---E
T ss_pred CCCEEEEECCcccHHHHHHHHH----CCCCeEEEEec-HHHHHHHHH-------------------HHHhcCCCCC---E
Confidence 4689999999999999999985 34789999999 999887766 3333344444 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC-CCCCc--HHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG-HDFNS--AWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~--v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
++..+|..+. + . ..+|+|++... |.+.+ ....++.+.+.|+|||.+++.|...
T Consensus 243 ~~~~~d~~~~-~-~-~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 243 RGIAVDIYKE-S-Y-PEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp EEEECCTTTS-C-C-CCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred EEEeCccccC-C-C-CCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 8888887653 2 2 23499987643 44444 5677999999999999998777554
No 212
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.76 E-value=2.4e-08 Score=97.14 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=81.8
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh-------
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ------- 225 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~------- 225 (327)
..++.+|||+|||+|..++.+|+. .+ ..+|+++|+++...+.+++ |+...
T Consensus 45 ~~~~~~VLDl~aGtG~~~l~~a~~---~~-~~~V~avDi~~~av~~a~~-------------------N~~~n~~~~~~~ 101 (378)
T 2dul_A 45 ILNPKIVLDALSATGIRGIRFALE---TP-AEEVWLNDISEDAYELMKR-------------------NVMLNFDGELRE 101 (378)
T ss_dssp HHCCSEEEESSCTTSHHHHHHHHH---SS-CSEEEEEESCHHHHHHHHH-------------------HHHHHCCSCCEE
T ss_pred HcCCCEEEECCCchhHHHHHHHHh---CC-CCeEEEEECCHHHHHHHHH-------------------HHHHhccccccc
Confidence 347889999999999999999985 33 5689999999999888877 44333
Q ss_pred --------ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 226 --------NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 226 --------g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.. . +.+..+|+.+.+..+..+||+|++|.- ......++.+++.|++||++++.
T Consensus 102 ~~~~~~~~gl~-~---i~v~~~Da~~~~~~~~~~fD~I~lDP~---~~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 102 SKGRAILKGEK-T---IVINHDDANRLMAERHRYFHFIDLDPF---GSPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp CSSEEEEESSS-E---EEEEESCHHHHHHHSTTCEEEEEECCS---SCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccccCCC-c---eEEEcCcHHHHHHhccCCCCEEEeCCC---CCHHHHHHHHHHhcCCCCEEEEE
Confidence 332 1 788899998877665678999999863 22347889999999999988775
No 213
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.75 E-value=1.8e-08 Score=96.08 Aligned_cols=104 Identities=17% Similarity=0.181 Sum_probs=78.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .++.+++++|+ +.+.+.+++ ++...+..++ |
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~----~~~~~~~~~D~-~~~~~~a~~-------------------~~~~~~~~~~---v 234 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALR----APHLRGTLVEL-AGPAERARR-------------------RFADAGLADR---V 234 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHHHHHH-------------------HHHHTTCTTT---E
T ss_pred CCCEEEEECCCcCHHHHHHHHH----CCCCEEEEEeC-HHHHHHHHH-------------------HHHhcCCCCc---e
Confidence 4689999999999999999985 35789999999 888887765 3333344444 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC-CCCCcH--HHHHHHHHccCCCCeEEEEEcC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSA--WADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v--~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
.+..++..+.++ ..||+|++... |.+... ...++.+.+.|+|||.+++.|.
T Consensus 235 ~~~~~d~~~~~~---~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 235 TVAEGDFFKPLP---VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEECCTTSCCS---CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEeCCCCCcCC---CCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 888888765333 34999998643 333332 3679999999999998888777
No 214
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.75 E-value=3.1e-09 Score=95.68 Aligned_cols=152 Identities=12% Similarity=0.014 Sum_probs=90.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc--
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL-- 232 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~-- 232 (327)
++.+|||||||+|..+..+++. +. .+|+++|+++.+.+.+++........-+-....++..+.. +..+...
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~----~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 128 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACE----SF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLE--GNRMKGPEK 128 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGG----TE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHT--TTCSCHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhc----cc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhccc--ccccchHHH
Confidence 4578999999999999888763 22 5899999999999888765421100000001112222211 1100000
Q ss_pred ------ce-EeeecchhhhhhhcC---CcEeEEEEcCCC-----CCCcHHHHHHHHHccCCCCeEEEEEcCCCCC-----
Q 041517 233 ------PV-PFSSGSALTKLCEWG---VVGDLIEIDAGH-----DFNSAWADINRAWRILRPGGVIFGHDYFTAA----- 292 (327)
Q Consensus 233 ------~V-~~~~gda~~~L~~l~---~~fDLIfIDa~h-----~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~----- 292 (327)
.+ .+..++..+..+..+ ++||+|+.-... ........++.+.++|+|||++++.+.....
T Consensus 129 ~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 208 (265)
T 2i62_A 129 EEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIG 208 (265)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEET
T ss_pred HHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcC
Confidence 05 666777655322223 789999976442 2234567789999999999999987754210
Q ss_pred -----CchhHHHHHHHHHHHcCCeEE
Q 041517 293 -----DNRGVRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 293 -----~~~GV~~Av~~f~~~~gl~v~ 313 (327)
...--.+.+..++...|+++.
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~aGf~~~ 234 (265)
T 2i62_A 209 EQKFSSLPLGWETVRDAVEEAGYTIE 234 (265)
T ss_dssp TEEEECCCCCHHHHHHHHHHTTCEEE
T ss_pred CccccccccCHHHHHHHHHHCCCEEE
Confidence 000023456667778888764
No 215
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.74 E-value=4.2e-08 Score=93.25 Aligned_cols=105 Identities=19% Similarity=0.165 Sum_probs=79.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .++.+++++|+ +.+.+.+++ ++...+..++ +
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~----~~~~~~~~~D~-~~~~~~a~~-------------------~~~~~~~~~~---v 235 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARR----APHVSATVLEM-AGTVDTARS-------------------YLKDEGLSDR---V 235 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-TTHHHHHHH-------------------HHHHTTCTTT---E
T ss_pred cCcEEEEeCCcCcHHHHHHHHh----CCCCEEEEecC-HHHHHHHHH-------------------HHHhcCCCCc---e
Confidence 4679999999999999999985 35789999999 888887766 3333344444 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC-CCCCcH--HHHHHHHHccCCCCeEEEEEcCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSA--WADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v--~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
.+..+|..+.++ ..||+|++... |.+... ...++.+.+.|+|||.+++.|..
T Consensus 236 ~~~~~d~~~~~~---~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 236 DVVEGDFFEPLP---RKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEECCTTSCCS---SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEeCCCCCCCC---CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 888888765333 35999997643 334332 46799999999999998888776
No 216
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.73 E-value=8.3e-08 Score=82.63 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=65.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCC--------cEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLD--------SQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQN 226 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~--------~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g 226 (327)
+..+|||||||+|..++.+++. ++.. ++|+++|+++.... . +
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~---~~~~~~~~~~~~~~v~~vD~s~~~~~---~-------------------~----- 71 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQK---VNAAGTDPSSPVGFVLGVDLLHIFPL---E-------------------G----- 71 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHH---TTTTCCCTTSCCCEEEEECSSCCCCC---T-------------------T-----
T ss_pred CCCEEEEeCCCCCHHHHHHHHH---hccccccccCCCceEEEEechhcccC---C-------------------C-----
Confidence 3579999999999999999985 3432 89999999984310 0 1
Q ss_pred cCCcccceEee-ecchhh-----hh-hhc-CCcEeEEEEcCCCCC--C---cH-------HHHHHHHHccCCCCeEEEEE
Q 041517 227 AIDSVLPVPFS-SGSALT-----KL-CEW-GVVGDLIEIDAGHDF--N---SA-------WADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 227 ~~~~v~~V~~~-~gda~~-----~L-~~l-~~~fDLIfIDa~h~~--~---~v-------~~dl~~~~~lL~pGGvIi~d 286 (327)
+.+. .++..+ .+ ..+ +.+||+|+.|..... . +. ...++.+.++|+|||.+++.
T Consensus 72 -------~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (196)
T 2nyu_A 72 -------ATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCK 144 (196)
T ss_dssp -------CEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 2222 222111 01 111 257999999874221 1 11 35688999999999999998
Q ss_pred cCCC
Q 041517 287 DYFT 290 (327)
Q Consensus 287 D~~~ 290 (327)
++..
T Consensus 145 ~~~~ 148 (196)
T 2nyu_A 145 TWAG 148 (196)
T ss_dssp ECCS
T ss_pred ecCC
Confidence 7754
No 217
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.72 E-value=1.3e-08 Score=89.12 Aligned_cols=98 Identities=14% Similarity=0.110 Sum_probs=71.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. +.+++++|+++.+.+.+++.. .
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~------~~~~~~~D~~~~~~~~~~~~~------------------------------~ 75 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN------GTRVSGIEAFPEAAEQAKEKL------------------------------D 75 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT------TCEEEEEESSHHHHHHHHTTS------------------------------S
T ss_pred CCCcEEEeCCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHhC------------------------------C
Confidence 5789999999999999998872 489999999988877665421 1
Q ss_pred Eeeecchhhh-hhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 235 PFSSGSALTK-LCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 235 ~~~~gda~~~-L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
++..++..+. ++..+++||+|+.... +........++.+.+.|+|||++++...
T Consensus 76 ~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 76 HVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp EEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred cEEEcchhhcCCCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2334444331 1222478999998644 2234556889999999999999998754
No 218
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.72 E-value=8.4e-09 Score=93.25 Aligned_cols=88 Identities=15% Similarity=0.027 Sum_probs=63.4
Q ss_pred HHHHHHHhhc-----CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHH
Q 041517 145 AVFGNLIDKV-----RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFL 219 (327)
Q Consensus 145 ~lL~~L~~~~-----~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl 219 (327)
.++..++... ++.+|||+|||+|..++.+++.. ++.+|+++|+++.+.+.|++
T Consensus 50 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~----~~~~v~gvD~s~~~~~~a~~------------------ 107 (254)
T 2h00_A 50 HWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATL----NGWYFLATEVDDMCFNYAKK------------------ 107 (254)
T ss_dssp HHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHH----HCCEEEEEESCHHHHHHHHH------------------
T ss_pred HHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhC----CCCeEEEEECCHHHHHHHHH------------------
Confidence 4555555433 35699999999999999998852 26899999999999988876
Q ss_pred HHHhhhccCCcccceEeeecchhhh-hhhcC----CcEeEEEEc
Q 041517 220 QNVIYQNAIDSVLPVPFSSGSALTK-LCEWG----VVGDLIEID 258 (327)
Q Consensus 220 ~nv~~~g~~~~v~~V~~~~gda~~~-L~~l~----~~fDLIfID 258 (327)
|+...++.++ +.+..+|+.+. +..+. .+||+|+.+
T Consensus 108 -~~~~~~~~~~---v~~~~~d~~~~~~~~~~~~~~~~fD~i~~n 147 (254)
T 2h00_A 108 -NVEQNNLSDL---IKVVKVPQKTLLMDALKEESEIIYDFCMCN 147 (254)
T ss_dssp -HHHHTTCTTT---EEEEECCTTCSSTTTSTTCCSCCBSEEEEC
T ss_pred -HHHHcCCCcc---EEEEEcchhhhhhhhhhcccCCcccEEEEC
Confidence 4443444444 78888886552 22222 589999998
No 219
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.72 E-value=6.5e-08 Score=91.62 Aligned_cols=134 Identities=12% Similarity=-0.038 Sum_probs=89.5
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..++...+..+|||+|||.|..|+.||+. ++..++|+++|+++.+.+.+++ |+...
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~---~~~~g~V~a~D~~~~~l~~~~~-------------------n~~r~ 150 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAAL---LKNQGKIFAFDLDAKRLASMAT-------------------LLARA 150 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHH---HTTCSEEEEEESCHHHHHHHHH-------------------HHHHT
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHH---hCCCCEEEEEeCCHHHHHHHHH-------------------HHHHc
Confidence 4444555445679999999999999999986 3557999999999988877665 45444
Q ss_pred ccCCcccceEeeecchhhhhhhc--CCcEeEEEEcCCCCCC------------------cH-------HHHHHHHHccCC
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFN------------------SA-------WADINRAWRILR 278 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~------------------~v-------~~dl~~~~~lL~ 278 (327)
|.. + |.+..+|+.+..... ..+||.|++|+.-... .+ .+.|+.++++++
T Consensus 151 g~~-~---v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~ 226 (309)
T 2b9e_A 151 GVS-C---CELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS 226 (309)
T ss_dssp TCC-S---EEEEECCGGGSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT
T ss_pred CCC-e---EEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC
Confidence 542 2 788888877643321 1579999999542110 00 123667788886
Q ss_pred CCeEEEEEcCCCCCCchhHHHHHHHHHHHc
Q 041517 279 PGGVIFGHDYFTAADNRGVRRAVNLFAKIN 308 (327)
Q Consensus 279 pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~ 308 (327)
||+|+...+...+ ..-.+.|..|.+++
T Consensus 227 -gG~lvYsTCs~~~--~Ene~~v~~~l~~~ 253 (309)
T 2b9e_A 227 -LQRLVYSTCSLCQ--EENEDVVRDALQQN 253 (309)
T ss_dssp -CCEEEEEESCCCG--GGTHHHHHHHHTTS
T ss_pred -CCEEEEECCCCCh--HHhHHHHHHHHHhC
Confidence 9999988776532 12234556666554
No 220
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.72 E-value=2.4e-08 Score=88.29 Aligned_cols=128 Identities=13% Similarity=0.026 Sum_probs=87.3
Q ss_pred HHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhc
Q 041517 147 FGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQN 226 (327)
Q Consensus 147 L~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g 226 (327)
+..+.+..++.+|||||||+|..+..+++ . +++|+++.+.+.+++ +
T Consensus 39 ~~~l~~~~~~~~vLDiG~G~G~~~~~l~~-------~---~~vD~s~~~~~~a~~-------------------~----- 84 (219)
T 1vlm_A 39 LQAVKCLLPEGRGVEIGVGTGRFAVPLKI-------K---IGVEPSERMAEIARK-------------------R----- 84 (219)
T ss_dssp HHHHHHHCCSSCEEEETCTTSTTHHHHTC-------C---EEEESCHHHHHHHHH-------------------T-----
T ss_pred HHHHHHhCCCCcEEEeCCCCCHHHHHHHH-------H---hccCCCHHHHHHHHh-------------------c-----
Confidence 34444445578999999999999887764 1 999999888776654 1
Q ss_pred cCCcccceEeeecchhhhhhhcCCcEeEEEEcCCC-CCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCc-----------
Q 041517 227 AIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGH-DFNSAWADINRAWRILRPGGVIFGHDYFTAADN----------- 294 (327)
Q Consensus 227 ~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h-~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~----------- 294 (327)
. +.+..++..+ ++..++.||+|+..... ..+.....++.+.+.|+|||++++.+......+
T Consensus 85 ---~---~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~ 157 (219)
T 1vlm_A 85 ---G---VFVLKGTAEN-LPLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKS 157 (219)
T ss_dssp ---T---CEEEECBTTB-CCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-
T ss_pred ---C---CEEEEccccc-CCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCc
Confidence 1 5555666543 23334689999987542 234566889999999999999999876541100
Q ss_pred ---h----hHHHHHHHHHHHcCCeEEEc
Q 041517 295 ---R----GVRRAVNLFAKINGLKVQID 315 (327)
Q Consensus 295 ---~----GV~~Av~~f~~~~gl~v~~~ 315 (327)
. =-...+..+++..|+++...
T Consensus 158 ~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 158 VFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred chhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 0 02355667778888886543
No 221
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.70 E-value=2.6e-08 Score=99.73 Aligned_cols=101 Identities=16% Similarity=0.162 Sum_probs=75.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..++.+++. ...+|+++|.++ +.+.|++ ++...++.++ |
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~-----~~~~V~gvD~s~-~l~~A~~-------------------~~~~~gl~~~---v 209 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQA-----GARKIYAVEAST-MAQHAEV-------------------LVKSNNLTDR---I 209 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHT-----TCSEEEEEECHH-HHHHHHH-------------------HHHHTTCTTT---E
T ss_pred CCCEEEEecCcccHHHHHHHHc-----CCCEEEEEEcHH-HHHHHHH-------------------HHHHcCCCCc---E
Confidence 5689999999999999988873 256999999998 7777765 3444455455 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC--C-CCCcHHHHHHHHHccCCCCeEEEE
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG--H-DFNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~--h-~~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
.+..++..+. .+.++||+|+.+.. | ..+.....+..+.+.|+|||++++
T Consensus 210 ~~~~~d~~~~--~~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 210 VVIPGKVEEV--SLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEEESCTTTC--CCSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEEECchhhC--ccCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 8888887662 23468999998754 1 123455677788999999999984
No 222
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.69 E-value=2.5e-08 Score=90.44 Aligned_cols=128 Identities=13% Similarity=0.049 Sum_probs=76.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+.++|||||||+|..+..+++. + ..+|++||++++|.+.+++... ++...+. .. +
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~----g-~~~V~gvDis~~ml~~a~~~~~----------------~~~~~~~-~~---~ 91 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN----G-AKLVYALDVGTNQLAWKIRSDE----------------RVVVMEQ-FN---F 91 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT----T-CSEEEEECSSCCCCCHHHHTCT----------------TEEEECS-CC---G
T ss_pred CCCEEEEEccCCCHHHHHHHhc----C-CCEEEEEcCCHHHHHHHHHhCc----------------ccccccc-ce---E
Confidence 3569999999999999999983 2 2599999999999987655321 0000000 00 1
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc---CCCCC---------Cchh----HH
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD---YFTAA---------DNRG----VR 298 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD---~~~~~---------~~~G----V~ 298 (327)
++... +.+.. ..||.+.+|...... ...+.++.++|+|||.+++-- +.... ..+. ..
T Consensus 92 ~~~~~---~~~~~--~~~d~~~~D~v~~~l--~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~ 164 (232)
T 3opn_A 92 RNAVL---ADFEQ--GRPSFTSIDVSFISL--DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTI 164 (232)
T ss_dssp GGCCG---GGCCS--CCCSEEEECCSSSCG--GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHH
T ss_pred EEeCH---hHcCc--CCCCEEEEEEEhhhH--HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHH
Confidence 11110 10111 135666666554332 478999999999999888741 11000 0111 34
Q ss_pred HHHHHHHHHcCCeEEE
Q 041517 299 RAVNLFAKINGLKVQI 314 (327)
Q Consensus 299 ~Av~~f~~~~gl~v~~ 314 (327)
+.+.+++...|+++..
T Consensus 165 ~~l~~~l~~aGf~v~~ 180 (232)
T 3opn_A 165 EKVLKTATQLGFSVKG 180 (232)
T ss_dssp HHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHCCCEEEE
Confidence 5566778888988653
No 223
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.69 E-value=1e-07 Score=91.93 Aligned_cols=125 Identities=10% Similarity=-0.006 Sum_probs=86.5
Q ss_pred HHHHHHHHhhcC--CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 144 GAVFGNLIDKVR--PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 144 g~lL~~L~~~~~--p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
..++..+++... +.+|||+|||+|..++.+|+. ..+|+++|.++.+.+.|++ |
T Consensus 200 ~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~------~~~V~gvd~~~~ai~~a~~-------------------n 254 (369)
T 3bt7_A 200 IQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN------FDRVLATEIAKPSVAAAQY-------------------N 254 (369)
T ss_dssp HHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG------SSEEEEECCCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc------CCEEEEEECCHHHHHHHHH-------------------H
Confidence 345555544433 578999999999999998873 4699999999999988876 4
Q ss_pred HhhhccCCcccceEeeecchhhhhhhcC---------------CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCEWG---------------VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~l~---------------~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+...+. ++ +.+..+++.+.++.+. ..||+|++|..-.. ..+.+.+.|++||.|+..
T Consensus 255 ~~~ng~-~~---v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g-----~~~~~~~~l~~~g~ivyv 325 (369)
T 3bt7_A 255 IAANHI-DN---VQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG-----LDSETEKMVQAYPRILYI 325 (369)
T ss_dssp HHHTTC-CS---EEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC-----CCHHHHHHHTTSSEEEEE
T ss_pred HHHcCC-Cc---eEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCccc-----cHHHHHHHHhCCCEEEEE
Confidence 444343 22 8889999888765432 27999999954321 224566667799999888
Q ss_pred cCCCCCCchhHHHHHHHHHH
Q 041517 287 DYFTAADNRGVRRAVNLFAK 306 (327)
Q Consensus 287 D~~~~~~~~GV~~Av~~f~~ 306 (327)
.+.. .-..+-+..+++
T Consensus 326 sc~p----~t~ard~~~l~~ 341 (369)
T 3bt7_A 326 SCNP----ETLCKNLETLSQ 341 (369)
T ss_dssp ESCH----HHHHHHHHHHHH
T ss_pred ECCH----HHHHHHHHHHhh
Confidence 7764 123344455553
No 224
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.69 E-value=4.2e-08 Score=89.14 Aligned_cols=97 Identities=16% Similarity=0.094 Sum_probs=71.9
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||||||+|..+..+++. + ++.+++++|+++.+.+.+++... . +
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~---~-~~~~v~~vD~s~~~~~~a~~~~~-------------------------~---~ 132 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADA---L-PEITTFGLDVSKVAIKAAAKRYP-------------------------Q---V 132 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHT---C-TTSEEEEEESCHHHHHHHHHHCT-------------------------T---S
T ss_pred CCCEEEEECCCCCHHHHHHHHh---C-CCCeEEEEeCCHHHHHHHHHhCC-------------------------C---c
Confidence 4679999999999999999984 2 36799999999988877655210 1 4
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+..++..+ ++..+++||+|+.-... ..++++.++|+|||++++.+...
T Consensus 133 ~~~~~d~~~-~~~~~~~fD~v~~~~~~------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 133 TFCVASSHR-LPFSDTSMDAIIRIYAP------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp EEEECCTTS-CSBCTTCEEEEEEESCC------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEEcchhh-CCCCCCceeEEEEeCCh------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 555666543 33334789999964332 35789999999999998876554
No 225
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.68 E-value=1.5e-08 Score=98.37 Aligned_cols=136 Identities=12% Similarity=0.060 Sum_probs=89.1
Q ss_pred HHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHH
Q 041517 146 VFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNV 222 (327)
Q Consensus 146 lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv 222 (327)
+...+++.. +..+|||||||+|..+..+++. +.+++++|+++.+.+.+++..
T Consensus 95 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~------g~~v~gvD~s~~~~~~a~~~~------------------- 149 (416)
T 4e2x_A 95 LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA------GVRHLGFEPSSGVAAKAREKG------------------- 149 (416)
T ss_dssp HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT------TCEEEEECCCHHHHHHHHTTT-------------------
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc------CCcEEEECCCHHHHHHHHHcC-------------------
Confidence 344444443 3569999999999999999984 569999999998888776531
Q ss_pred hhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCCCcHHHHHHHHHccCCCCeEEEEEcCCC---------CC
Q 041517 223 IYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDFNSAWADINRAWRILRPGGVIFGHDYFT---------AA 292 (327)
Q Consensus 223 ~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~---------~~ 292 (327)
.... ..+...+..+.++..+++||+|+.... +..+.....++++.++|+|||++++..... ..
T Consensus 150 ----~~~~---~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~ 222 (416)
T 4e2x_A 150 ----IRVR---TDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQ 222 (416)
T ss_dssp ----CCEE---CSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGG
T ss_pred ----CCcc---eeeechhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhh
Confidence 0000 111112222333433578999997654 333567788999999999999999975431 00
Q ss_pred Cc-hh----HHHHHHHHHHHcCCeEE
Q 041517 293 DN-RG----VRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 293 ~~-~G----V~~Av~~f~~~~gl~v~ 313 (327)
-+ +. -.+.+..+++..|+++.
T Consensus 223 ~~~~~~~~~s~~~l~~ll~~aGf~~~ 248 (416)
T 4e2x_A 223 IFDEHFFLFSATSVQGMAQRCGFELV 248 (416)
T ss_dssp CSTTCCEECCHHHHHHHHHHTTEEEE
T ss_pred hhhhhhhcCCHHHHHHHHHHcCCEEE
Confidence 00 00 23567778888888754
No 226
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.68 E-value=4.3e-08 Score=92.21 Aligned_cols=110 Identities=10% Similarity=-0.029 Sum_probs=70.4
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccC--Ccccc
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI--DSVLP 233 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~--~~v~~ 233 (327)
..+|||||||+|..+..+++. ...+|++||+++.|.+.|++... + .+.. .+...
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~-----~~~~v~GiD~S~~~l~~A~~~~~----------------~---~~~~~~~~~~~ 104 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYG-----EIALLVATDPDADAIARGNERYN----------------K---LNSGIKTKYYK 104 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHT-----TCSEEEEEESCHHHHHHHHHHHH----------------H---HCC----CCCE
T ss_pred CCeEEEEecCCcHhHHHHHhc-----CCCeEEEEECCHHHHHHHHHHHH----------------h---ccccccccccc
Confidence 579999999999765555542 25799999999999998876321 1 1110 00001
Q ss_pred eEeeecch----h-hhhhh--cCCcEeEEEEcC-CC---CCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 234 VPFSSGSA----L-TKLCE--WGVVGDLIEIDA-GH---DFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 234 V~~~~gda----~-~~L~~--l~~~fDLIfIDa-~h---~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+.+..++. . +.|+. .+++||+|++-. -| ..++....++++.++|+|||++++....
T Consensus 105 ~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 105 FDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp EEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 33433332 1 22321 247899998643 22 1134568899999999999999987653
No 227
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.68 E-value=1.1e-07 Score=82.24 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=30.9
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCC-CcEEEEEeCCCC
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGL-DSQILCIDDFRG 194 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~-~~~V~~ID~~~~ 194 (327)
..+|||||||+|..+..+++. +++ +++|+++|+++.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~---~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILER---TKNYKNKIIGIDKKIM 59 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHH---TTTSCEEEEEEESSCC
T ss_pred CCEEEEeCCCCCHHHHHHHHH---cCCCCceEEEEeCCcc
Confidence 468999999999999999985 343 689999999984
No 228
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.67 E-value=6.2e-07 Score=78.03 Aligned_cols=120 Identities=15% Similarity=0.146 Sum_probs=84.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|..++.+++. + ..+++++|+++.+.+.++++ +...+. .+
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~----~-~~~v~~vD~~~~~~~~a~~~-------------------~~~~~~-----~~ 99 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL----G-AKEVICVEVDKEAVDVLIEN-------------------LGEFKG-----KF 99 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT----T-CSEEEEEESCHHHHHHHHHH-------------------TGGGTT-----SE
T ss_pred CcCEEEEeeCCCCHHHHHHHHc----C-CCEEEEEECCHHHHHHHHHH-------------------HHHcCC-----CE
Confidence 4679999999999999999873 2 35899999999988877663 222232 27
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCC---CcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCe
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDF---NSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLK 311 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~---~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~ 311 (327)
.+..+|+.+ + +..||+|++|..... ......++.+.+.+ |++++.. +. .++-.+.+..++.+.|++
T Consensus 100 ~~~~~d~~~-~---~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~-~~----~~~~~~~~~~~l~~~g~~ 168 (207)
T 1wy7_A 100 KVFIGDVSE-F---NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH-LA----KPEVRRFIEKFSWEHGFV 168 (207)
T ss_dssp EEEESCGGG-C---CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE-EC----CHHHHHHHHHHHHHTTEE
T ss_pred EEEECchHH-c---CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE-eC----CcCCHHHHHHHHHHCCCe
Confidence 888888766 2 358999999864211 22346788888888 7766654 21 245556667777888877
Q ss_pred EEE
Q 041517 312 VQI 314 (327)
Q Consensus 312 v~~ 314 (327)
+..
T Consensus 169 ~~~ 171 (207)
T 1wy7_A 169 VTH 171 (207)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 229
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.62 E-value=4.9e-08 Score=95.53 Aligned_cols=105 Identities=19% Similarity=0.149 Sum_probs=81.1
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||++||+|..++.+|..+ +.-.+|+++|.++...+.+++ |+...++.++ .+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~---~ga~~V~avDi~~~av~~~~~-------------------N~~~Ngl~~~--~v 107 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLET---SCVEKAYANDISSKAIEIMKE-------------------NFKLNNIPED--RY 107 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHC---SCEEEEEEECSCHHHHHHHHH-------------------HHHHTTCCGG--GE
T ss_pred CCCEEEECCCcccHHHHHHHHhC---CCCCEEEEEECCHHHHHHHHH-------------------HHHHhCCCCc--eE
Confidence 35799999999999999999842 212689999999988887776 5555554331 16
Q ss_pred Eeeecchhhhhh-hcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 235 PFSSGSALTKLC-EWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 235 ~~~~gda~~~L~-~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
.+..+|+.+.+. .+...||+|++|. +......++.+.+.|++||+|++.
T Consensus 108 ~v~~~Da~~~l~~~~~~~fD~V~lDP---~g~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 108 EIHGMEANFFLRKEWGFGFDYVDLDP---FGTPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp EEECSCHHHHHHSCCSSCEEEEEECC---SSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEeCCHHHHHHHhhCCCCcEEEECC---CcCHHHHHHHHHHHhCCCCEEEEE
Confidence 788999998887 6667899999998 222236788999999999988763
No 230
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.62 E-value=1.3e-07 Score=93.19 Aligned_cols=106 Identities=14% Similarity=0.097 Sum_probs=76.0
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
++..+.+..+..+|||+|||+|..++.+|+. ..+|+++|.++.+.+.|++ |+...
T Consensus 281 l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~------~~~V~gvD~s~~ai~~A~~-------------------n~~~n 335 (425)
T 2jjq_A 281 LVRKVSELVEGEKILDMYSGVGTFGIYLAKR------GFNVKGFDSNEFAIEMARR-------------------NVEIN 335 (425)
T ss_dssp HHHHHHHHCCSSEEEEETCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHH-------------------HHHHH
T ss_pred HHHHhhccCCCCEEEEeeccchHHHHHHHHc------CCEEEEEECCHHHHHHHHH-------------------HHHHc
Confidence 4444444345679999999999999999984 5799999999999988876 33333
Q ss_pred ccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 226 NAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 226 g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.. +.+..+|+.+.++. .||+|++|....... ..+-..+..|+|||++++.
T Consensus 336 gl~-----v~~~~~d~~~~~~~---~fD~Vv~dPPr~g~~--~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 336 NVD-----AEFEVASDREVSVK---GFDTVIVDPPRAGLH--PRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp TCC-----EEEEECCTTTCCCT---TCSEEEECCCTTCSC--HHHHHHHHHHCCSEEEEEE
T ss_pred CCc-----EEEEECChHHcCcc---CCCEEEEcCCccchH--HHHHHHHHhcCCCcEEEEE
Confidence 331 77888888775432 799999986532222 3333444569999998884
No 231
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.61 E-value=2.4e-08 Score=92.02 Aligned_cols=151 Identities=14% Similarity=-0.019 Sum_probs=84.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh-hccCCc---
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY-QNAIDS--- 230 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~-~g~~~~--- 230 (327)
++.+|||||||+|..++.++. ....+|+++|+++.|.+.+++........-+.. ....++.. .+....
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~-----~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~ 142 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSAC-----SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWS---MYSQHACLIEGKGECWQD 142 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGG-----GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCH---HHHHHHHHHHCSCCCHHH
T ss_pred CCCeEEEECCCcChHHHHhhc-----cCCCeEEEeCCCHHHHHHHHHHHhhCcccccch---hhhhHHHHhcCcccchhh
Confidence 568999999999995444333 125699999999999988876432100000000 00011110 010000
Q ss_pred ------ccceEeeecchhhhhhh-----cCCcEeEEEEcCCCCC-----CcHHHHHHHHHccCCCCeEEEEEcCCCCC--
Q 041517 231 ------VLPVPFSSGSALTKLCE-----WGVVGDLIEIDAGHDF-----NSAWADINRAWRILRPGGVIFGHDYFTAA-- 292 (327)
Q Consensus 231 ------v~~V~~~~gda~~~L~~-----l~~~fDLIfIDa~h~~-----~~v~~dl~~~~~lL~pGGvIi~dD~~~~~-- 292 (327)
-..+.+..+|..+.++. .+++||+|+.-....+ +.....++++.++|+|||++++.+.....
T Consensus 143 ~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~ 222 (289)
T 2g72_A 143 KERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWY 222 (289)
T ss_dssp HHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEE
T ss_pred hHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceE
Confidence 00034455555442221 1356999997654222 24567899999999999999987543210
Q ss_pred --------CchhHHHHHHHHHHHcCCeEE
Q 041517 293 --------DNRGVRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 293 --------~~~GV~~Av~~f~~~~gl~v~ 313 (327)
...--.+.+..++...|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 251 (289)
T 2g72_A 223 LAGEARLTVVPVSEEEVREALVRSGYKVR 251 (289)
T ss_dssp EETTEEEECCCCCHHHHHHHHHHTTEEEE
T ss_pred EcCCeeeeeccCCHHHHHHHHHHcCCeEE
Confidence 000023556667777888764
No 232
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.59 E-value=7.4e-08 Score=91.64 Aligned_cols=103 Identities=13% Similarity=0.097 Sum_probs=74.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .++.+++++|.. .+.. ++ ++...+..++ |
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~----~p~~~~~~~D~~-~~~~--~~-------------------~~~~~~~~~~---v 234 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLRE----HPGLQGVLLDRA-EVVA--RH-------------------RLDAPDVAGR---W 234 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHH----CTTEEEEEEECH-HHHT--TC-------------------CCCCGGGTTS---E
T ss_pred CCceEEEECCccCHHHHHHHHH----CCCCEEEEecCH-HHhh--cc-------------------cccccCCCCC---e
Confidence 3679999999999999999985 347899999993 2222 11 1111233334 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcC-CCCCCcH--HHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDA-GHDFNSA--WADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~v--~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
++..+|..+.++ .||+|++-. -|.+++. ...++++.+.|+|||.+++.|...
T Consensus 235 ~~~~~d~~~~~p----~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 235 KVVEGDFLREVP----HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp EEEECCTTTCCC----CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred EEEecCCCCCCC----CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 888888764333 799999754 4545544 578999999999999999888765
No 233
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.58 E-value=1.6e-07 Score=99.26 Aligned_cols=116 Identities=12% Similarity=0.002 Sum_probs=79.4
Q ss_pred HhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCc
Q 041517 151 IDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDS 230 (327)
Q Consensus 151 ~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~ 230 (327)
+...++.+|||||||+|..+..|++. .++..+|++||+++.+.+.|++.... ..|....+.
T Consensus 717 L~~~~g~rVLDVGCGTG~lai~LAr~---g~p~a~VtGVDIS~emLe~AReRLa~-------------~lnAkr~gl--- 777 (950)
T 3htx_A 717 IRESSASTLVDFGCGSGSLLDSLLDY---PTSLQTIIGVDISPKGLARAAKMLHV-------------KLNKEACNV--- 777 (950)
T ss_dssp HHHSCCSEEEEETCSSSHHHHHHTSS---CCCCCEEEEEESCHHHHHHHHHHHHH-------------HTTTTCSSC---
T ss_pred hcccCCCEEEEECCCCCHHHHHHHHh---CCCCCeEEEEECCHHHHHHHHHHhhh-------------ccchhhcCC---
Confidence 34447889999999999999999973 23458999999999999888663210 001001121
Q ss_pred ccceEeeecchhhhhhhcCCcEeEEEEcCCCCC-Cc--HHHHHHHHHccCCCCeEEEEEcC
Q 041517 231 VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF-NS--AWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~-~~--v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
..+.+..+|..+ ++...+.||+|+......+ ++ ....++.+.++|+|| ++++.+.
T Consensus 778 -~nVefiqGDa~d-Lp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 778 -KSATLYDGSILE-FDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp -SEEEEEESCTTS-CCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred -CceEEEECchHh-CCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 138899998776 3444578999998654322 32 224688999999999 6666543
No 234
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.58 E-value=2.5e-07 Score=81.14 Aligned_cols=96 Identities=21% Similarity=0.177 Sum_probs=65.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|..+..+++. +++|++||+++.... . + +
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~------~~~V~gvD~~~~~~~---~-------------------~------------v 64 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL------ARKIISIDLQEMEEI---A-------------------G------------V 64 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT------CSEEEEEESSCCCCC---T-------------------T------------C
T ss_pred CCCEEEEEeecCCHHHHHHHHc------CCcEEEEeccccccC---C-------------------C------------e
Confidence 3579999999999999999873 789999999875220 0 1 4
Q ss_pred Eeeecchhhh-----hhh-cC----CcEeEEEEcCCCCCCc------------HHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTK-----LCE-WG----VVGDLIEIDAGHDFNS------------AWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~-----L~~-l~----~~fDLIfIDa~h~~~~------------v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+..+|..+. +.. ++ ++||+|+.|+...... ....++.+.++|+|||.+++--+..
T Consensus 65 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 65 RFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp EEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred EEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 4444443321 111 11 4899999997532111 1345778899999999999866643
No 235
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.57 E-value=9e-08 Score=89.20 Aligned_cols=119 Identities=9% Similarity=-0.029 Sum_probs=77.3
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||+|||+|..+..+++ . ++|++||+++ +...+++... ...... ..+.
T Consensus 83 g~~VLDlGcGtG~~s~~la~----~---~~V~gVD~s~-m~~~a~~~~~------------------~~~~~~---~~v~ 133 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAAS----Q---PNVREVKAYT-LGTSGHEKPR------------------LVETFG---WNLI 133 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHT----S---TTEEEEEEEC-CCCTTSCCCC------------------CCCCTT---GGGE
T ss_pred CCEEEEeccCCCHHHHHHHH----c---CCEEEEECch-hhhhhhhchh------------------hhhhcC---CCeE
Confidence 46899999999999999887 2 7899999998 5433322100 000000 0266
Q ss_pred ee--ecchhhhhhhcCCcEeEEEEcCCCCCCc-------HHHHHHHHHccCCCCe--EEEEEcCCCCCCchhHHHHHHHH
Q 041517 236 FS--SGSALTKLCEWGVVGDLIEIDAGHDFNS-------AWADINRAWRILRPGG--VIFGHDYFTAADNRGVRRAVNLF 304 (327)
Q Consensus 236 ~~--~gda~~~L~~l~~~fDLIfIDa~h~~~~-------v~~dl~~~~~lL~pGG--vIi~dD~~~~~~~~GV~~Av~~f 304 (327)
+. .+|..+ ++ +++||+|+.|..+.... ....++.+.+.|+||| .+++..+. +..+.+.+.+..+
T Consensus 134 ~~~~~~D~~~-l~--~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~--~~~~~~~~~l~~l 208 (276)
T 2wa2_A 134 TFKSKVDVTK-ME--PFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN--PYSCDVLEALMKM 208 (276)
T ss_dssp EEECSCCGGG-CC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC--CCSHHHHHHHHHH
T ss_pred EEeccCcHhh-CC--CCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC--CCchhHHHHHHHH
Confidence 66 677655 33 47899999997632111 1135788899999999 99886655 5556455556655
Q ss_pred HHHc
Q 041517 305 AKIN 308 (327)
Q Consensus 305 ~~~~ 308 (327)
....
T Consensus 209 ~~~f 212 (276)
T 2wa2_A 209 QARF 212 (276)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 5443
No 236
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.56 E-value=5.6e-07 Score=84.10 Aligned_cols=137 Identities=12% Similarity=0.025 Sum_probs=83.6
Q ss_pred HHHHHhhcCCCEEEEEcCcc--hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 147 FGNLIDKVRPRVIIEVGSFL--GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 147 L~~L~~~~~p~~VLEIGt~~--G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
+..|....+.+.|||||||. +.++..+++. ..++.+|++||.++.|++++++.. ..
T Consensus 70 v~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~---~~P~arVv~VD~sp~mLa~Ar~~l-------------------~~ 127 (277)
T 3giw_A 70 VAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQS---VAPESRVVYVDNDPIVLTLSQGLL-------------------AS 127 (277)
T ss_dssp HHHHHHTSCCCEEEEESCCSCCSSCHHHHHHH---HCTTCEEEEEECCHHHHHTTHHHH-------------------CC
T ss_pred HHHhccccCCCEEEEeCCCCCcccHHHHHHHH---HCCCCEEEEEeCChHHHHHHHHHh-------------------cc
Confidence 33343333567999999997 4455666653 356899999999999999887632 11
Q ss_pred hccCCcccceEeeecchhhh---hh--------hcCCcEeEEEEcCCCCCCc---HHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 225 QNAIDSVLPVPFSSGSALTK---LC--------EWGVVGDLIEIDAGHDFNS---AWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~---L~--------~l~~~fDLIfIDa~h~~~~---v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+ .++ +.+..+|..+. +. .++.+++++.+-.-|--.+ ....+..+.+.|+|||++++.+...
T Consensus 128 ~~-~~~---~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 128 TP-EGR---TAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp CS-SSE---EEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred CC-CCc---EEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 11 112 77777776553 11 1124444544444442223 4678999999999999999998775
Q ss_pred CCCchhHHHHHHHHHHHcCC
Q 041517 291 AADNRGVRRAVNLFAKINGL 310 (327)
Q Consensus 291 ~~~~~GV~~Av~~f~~~~gl 310 (327)
+ ..+...+.+.+..+..|.
T Consensus 204 d-~~p~~~~~~~~~~~~~g~ 222 (277)
T 3giw_A 204 E-FAPQEVGRVAREYAARNM 222 (277)
T ss_dssp T-TSHHHHHHHHHHHHHTTC
T ss_pred C-CCHHHHHHHHHHHHhcCC
Confidence 3 223323333333344443
No 237
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.55 E-value=3e-08 Score=90.68 Aligned_cols=151 Identities=11% Similarity=-0.036 Sum_probs=85.9
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh---------
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ--------- 225 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~--------- 225 (327)
+..+|||||||+|..++.++.. + -.+|+++|.++.|.+.+++........-+-.-.-.+..++...
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~----~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD----S-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG----T-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh----h-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4568999999999877665542 1 2479999999999998877532110000000000111111100
Q ss_pred ccCCcccceE-eeecchhhhhhh---cCCcEeEEEEcCCC-----CCCcHHHHHHHHHccCCCCeEEEEEcCCCCCC---
Q 041517 226 NAIDSVLPVP-FSSGSALTKLCE---WGVVGDLIEIDAGH-----DFNSAWADINRAWRILRPGGVIFGHDYFTAAD--- 293 (327)
Q Consensus 226 g~~~~v~~V~-~~~gda~~~L~~---l~~~fDLIfIDa~h-----~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~--- 293 (327)
..... +. +..+|..+..+. ..++||+|+.-... ..+.....+.++.++|||||++++.+......
T Consensus 130 ~~~~~---i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~ 206 (263)
T 2a14_A 130 KLRAA---VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMV 206 (263)
T ss_dssp HHHHH---EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEE
T ss_pred HHHhh---hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcccee
Confidence 00001 33 556665542221 24689999975331 12344578899999999999999987543110
Q ss_pred ----chh---HHHHHHHHHHHcCCeEE
Q 041517 294 ----NRG---VRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 294 ----~~G---V~~Av~~f~~~~gl~v~ 313 (327)
++. -.+-+...+...|+++.
T Consensus 207 g~~~~~~~~~~~~~l~~~l~~aGF~i~ 233 (263)
T 2a14_A 207 GKREFSCVALEKGEVEQAVLDAGFDIE 233 (263)
T ss_dssp TTEEEECCCCCHHHHHHHHHHTTEEEE
T ss_pred CCeEeeccccCHHHHHHHHHHCCCEEE
Confidence 010 23456666777888764
No 238
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.53 E-value=9e-07 Score=76.79 Aligned_cols=113 Identities=16% Similarity=-0.000 Sum_probs=77.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++.+|||+|||+|..++.+++. + ..+|+++|+++.+.+.++++ +. .+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~----~-~~~v~~vD~~~~~~~~a~~~-------------------~~---------~~ 97 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL----G-AESVTAFDIDPDAIETAKRN-------------------CG---------GV 97 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT----T-BSEEEEEESCHHHHHHHHHH-------------------CT---------TS
T ss_pred CCCEEEEEeCCccHHHHHHHHc----C-CCEEEEEECCHHHHHHHHHh-------------------cC---------CC
Confidence 5679999999999999999873 2 45899999999988877652 21 16
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCC---CcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCe
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDF---NSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLK 311 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~---~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~ 311 (327)
.+..++..+ + +++||+|+.|..... ......++.+.+.+ |+++++.+. +....+...+...| +
T Consensus 98 ~~~~~d~~~-~---~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~~-------~~~~~~~~~~~~~g-~ 163 (200)
T 1ne2_A 98 NFMVADVSE-I---SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGNA-------KARDFLRREFSARG-D 163 (200)
T ss_dssp EEEECCGGG-C---CCCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEEEG-------GGHHHHHHHHHHHE-E
T ss_pred EEEECcHHH-C---CCCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEEcC-------chHHHHHHHHHHCC-C
Confidence 777887766 2 368999999865211 11235678888887 676666533 22344555556666 5
Q ss_pred EEE
Q 041517 312 VQI 314 (327)
Q Consensus 312 v~~ 314 (327)
+..
T Consensus 164 ~~~ 166 (200)
T 1ne2_A 164 VFR 166 (200)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 239
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.53 E-value=1.1e-07 Score=87.99 Aligned_cols=120 Identities=10% Similarity=-0.018 Sum_probs=78.3
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||||||+|..+..+++ . ++|++||+++ +...+++... ...... ..+.
T Consensus 75 g~~VLDlGcGtG~~s~~la~----~---~~V~gvD~s~-m~~~a~~~~~------------------~~~~~~---~~v~ 125 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAAS----R---PHVMDVRAYT-LGVGGHEVPR------------------ITESYG---WNIV 125 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHT----S---TTEEEEEEEC-CCCSSCCCCC------------------CCCBTT---GGGE
T ss_pred CCEEEEeCcCCCHHHHHHHH----c---CcEEEEECch-hhhhhhhhhh------------------hhhccC---CCeE
Confidence 46899999999999998887 2 7899999998 5332221100 000000 0156
Q ss_pred ee--ecchhhhhhhcCCcEeEEEEcCCCCCCc-------HHHHHHHHHccCCCCe--EEEEEcCCCCCCchhHHHHHHHH
Q 041517 236 FS--SGSALTKLCEWGVVGDLIEIDAGHDFNS-------AWADINRAWRILRPGG--VIFGHDYFTAADNRGVRRAVNLF 304 (327)
Q Consensus 236 ~~--~gda~~~L~~l~~~fDLIfIDa~h~~~~-------v~~dl~~~~~lL~pGG--vIi~dD~~~~~~~~GV~~Av~~f 304 (327)
+. .+|..+ ++ +.+||+|+.|..+.... ....++.+.+.|+||| .+++..+. +..+.+.+.+..+
T Consensus 126 ~~~~~~D~~~-l~--~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~--~~~~~~~~~l~~l 200 (265)
T 2oxt_A 126 KFKSRVDIHT-LP--VERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC--PYSVEVMERLSVM 200 (265)
T ss_dssp EEECSCCTTT-SC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC--TTSHHHHHHHHHH
T ss_pred EEecccCHhH-CC--CCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC--CCChhHHHHHHHH
Confidence 66 666655 33 47899999997632111 1136788899999999 99987765 5556555666666
Q ss_pred HHHcC
Q 041517 305 AKING 309 (327)
Q Consensus 305 ~~~~g 309 (327)
....+
T Consensus 201 ~~~f~ 205 (265)
T 2oxt_A 201 QRKWG 205 (265)
T ss_dssp HHHHC
T ss_pred HHHcC
Confidence 55543
No 240
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.52 E-value=6.7e-07 Score=86.34 Aligned_cols=124 Identities=14% Similarity=0.132 Sum_probs=82.7
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..+..+|||+|||+|..++.+|+. +..++|+++|+++.+.+.|++ |+...|+.++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~----~~~~~v~g~Dis~~~l~~A~~-------------------n~~~~gl~~~-- 269 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALR----RYSGEIIGIEKYRKHLIGAEM-------------------NALAAGVLDK-- 269 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHT----TCCSCEEEEESCHHHHHHHHH-------------------HHHHTTCGGG--
T ss_pred cCCCCEEEEccCcCcHHHHHHHHh----CCCCeEEEEeCCHHHHHHHHH-------------------HHHHcCCCCc--
Confidence 345679999999999999999984 445699999999999988876 5555555444
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCC--------CCcH-HHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHH
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHD--------FNSA-WADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNL 303 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~--------~~~v-~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~ 303 (327)
+.+..+|+.+. +....+||+|+.|-... .... ...++.+.+.| +|+.+++. .. .+.+..
T Consensus 270 -i~~~~~D~~~~-~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~-~~--------~~~~~~ 337 (373)
T 3tm4_A 270 -IKFIQGDATQL-SQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT-TE--------KKAIEE 337 (373)
T ss_dssp -CEEEECCGGGG-GGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE-SC--------HHHHHH
T ss_pred -eEEEECChhhC-CcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE-CC--------HHHHHH
Confidence 88889998774 44357899999974311 1111 34456777777 44333332 11 233444
Q ss_pred HHHHcCCeEE
Q 041517 304 FAKINGLKVQ 313 (327)
Q Consensus 304 f~~~~gl~v~ 313 (327)
.....|+++.
T Consensus 338 ~~~~~G~~~~ 347 (373)
T 3tm4_A 338 AIAENGFEII 347 (373)
T ss_dssp HHHHTTEEEE
T ss_pred HHHHcCCEEE
Confidence 5566676653
No 241
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.50 E-value=6.2e-08 Score=89.68 Aligned_cols=115 Identities=10% Similarity=0.087 Sum_probs=72.7
Q ss_pred HHHHHHhhcCC--CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 146 VFGNLIDKVRP--RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 146 lL~~L~~~~~p--~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
.+...+...+. .+|||+|||.|..++.+|+. +++|++||.++.+.+++++..+ +..+|..
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~------g~~V~~vE~~~~~~~l~~~~l~------------~a~~~~~ 138 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV------GCRVRMLERNPVVAALLDDGLA------------RGYADAE 138 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH------TCCEEEEECCHHHHHHHHHHHH------------HHHHCTT
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHH------------HHHhhHh
Confidence 34444444445 79999999999999999984 6789999999987776665321 0011111
Q ss_pred hhc-cCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCe
Q 041517 224 YQN-AIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGG 281 (327)
Q Consensus 224 ~~g-~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGG 281 (327)
..+ ..++ +++..+|+.+.++.+...||+||+|-......-...++..++.|++.+
T Consensus 139 ~~~~l~~~---i~~~~~D~~~~L~~~~~~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 139 IGGWLQER---LQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp THHHHHHH---EEEEESCHHHHSTTCSSCCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred hhhhhhcC---EEEEECCHHHHHHhCcccCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 111 1122 889999999988766668999999975433221134455555555544
No 242
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.48 E-value=2.3e-07 Score=88.97 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=72.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .++.+++++|. +.+.+.+++. .+ |
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~----~~~~~~~~~D~-~~~~~~a~~~--------------------------~~---v 254 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISK----YPLIKGINFDL-PQVIENAPPL--------------------------SG---I 254 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHTTCCCC--------------------------TT---E
T ss_pred CCCEEEEeCCCCcHHHHHHHHH----CCCCeEEEeCh-HHHHHhhhhc--------------------------CC---C
Confidence 3679999999999999999985 35789999999 6665544321 11 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcC-CCCCCcHH--HHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDA-GHDFNSAW--ADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~v~--~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
++..+|..+.+ +. ||+|++-. -|...+.. ..++.+.+.|+|||.+++.|...
T Consensus 255 ~~~~~d~~~~~---~~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 255 EHVGGDMFASV---PQ-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp EEEECCTTTCC---CC-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEeCCcccCC---CC-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 78888766522 23 99999754 34444433 78999999999999999887654
No 243
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.47 E-value=1.1e-06 Score=82.80 Aligned_cols=131 Identities=12% Similarity=0.062 Sum_probs=92.6
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhcc-CCcc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA-IDSV 231 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~-~~~v 231 (327)
.-.|++||-||-|.|..+..+++ ..+..+|+.||+++...+.++++.. .+....+ +.+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk----~~~v~~v~~VEID~~Vv~~a~~~lp----------------~~~~~~~~dpR- 139 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTR----HKNVESITMVEIDAGVVSFCRQYLP----------------NHNAGSYDDPR- 139 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHT----CTTCCEEEEEESCHHHHHHHHHHCH----------------HHHTTGGGCTT-
T ss_pred CCCCCeEEEECCCchHHHHHHHH----cCCcceEEEEcCCHHHHHHHHhcCc----------------cccccccCCCc-
Confidence 34689999999999999988887 4557899999999999998887642 1111111 223
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCCCCCCc-----HHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHH
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNS-----AWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAK 306 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~-----v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~ 306 (327)
+++..+|+.+.+..-.++||+|++|......+ ....++.+.+.|+|||+++..--..-..-.-+....+.+.+
T Consensus 140 --v~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~ 217 (294)
T 3o4f_A 140 --FKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSH 217 (294)
T ss_dssp --EEEEESCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHH
T ss_pred --EEEEechHHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHh
Confidence 88899999998877778999999997532211 23678999999999999998533221122334444444433
No 244
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.45 E-value=7.7e-07 Score=82.89 Aligned_cols=131 Identities=14% Similarity=-0.032 Sum_probs=75.4
Q ss_pred CCCEEEEEcCcchH----HHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCcc-ccc-hHHHHHHHHHHhh--hc
Q 041517 155 RPRVIIEVGSFLGA----SALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMV-NGN-VLLYFQFLQNVIY--QN 226 (327)
Q Consensus 155 ~p~~VLEIGt~~G~----Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~-~g~-~~~~~~Fl~nv~~--~g 226 (327)
++.+|+++|||+|. .++.+++.+...+.+.+|+++|+++.+.+.|++....... .+- .....++...... .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 4555665422111146999999999999999875310000 000 0111111000000 00
Q ss_pred ---cCCcc-cceEeeecchhhh-hhhcCCcEeEEEEcCCCC-CCc--HHHHHHHHHccCCCCeEEEEE
Q 041517 227 ---AIDSV-LPVPFSSGSALTK-LCEWGVVGDLIEIDAGHD-FNS--AWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 227 ---~~~~v-~~V~~~~gda~~~-L~~l~~~fDLIfIDa~h~-~~~--v~~dl~~~~~lL~pGGvIi~d 286 (327)
..+.+ ..|.|..++..+. ++ ..++||+|+.-.-.- .++ ....++.+.+.|+|||++++-
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~-~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYN-VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCC-CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCC-cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 00000 0288888886652 11 136899999854322 222 256789999999999999983
No 245
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.44 E-value=8.8e-08 Score=88.36 Aligned_cols=89 Identities=11% Similarity=0.097 Sum_probs=65.1
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC-------CChhhhhhhcccCccccchHHHHH
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR-------GWPGFRDKFKEIPMVNGNVLLYFQ 217 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~-------~~~~~A~~~~~~~~~~g~~~~~~~ 217 (327)
.++...++..+..+|||+|||+|..++.+|+. +++|+++|.++ .+.+.+++
T Consensus 73 ~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~------g~~V~~vD~s~~~~~ll~~~l~~a~~---------------- 130 (258)
T 2r6z_A 73 ELIAKAVNHTAHPTVWDATAGLGRDSFVLASL------GLTVTAFEQHPAVACLLSDGIRRALL---------------- 130 (258)
T ss_dssp CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT------TCCEEEEECCHHHHHHHHHHHHHHHH----------------
T ss_pred HHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh------CCEEEEEECChhhhHHHHHHHHHHHh----------------
Confidence 34555554444579999999999999999983 57999999999 66666654
Q ss_pred HHHHHhhhccCCcccceEeeecchhhhhhhcC---CcEeEEEEcCCC
Q 041517 218 FLQNVIYQNAIDSVLPVPFSSGSALTKLCEWG---VVGDLIEIDAGH 261 (327)
Q Consensus 218 Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l~---~~fDLIfIDa~h 261 (327)
|....+..++ |.+..+++.+.++.+. .+||+|++|...
T Consensus 131 ---n~~~~~~~~r---i~~~~~d~~~~l~~~~~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 131 ---NPETQDTAAR---INLHFGNAAEQMPALVKTQGKPDIVYLDPMY 171 (258)
T ss_dssp ---SHHHHHHHTT---EEEEESCHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred ---HHHhhCCccC---eEEEECCHHHHHHhhhccCCCccEEEECCCC
Confidence 2322233233 8899999988766543 689999999653
No 246
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.43 E-value=2.4e-07 Score=88.14 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=73.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .++.+++++|. +.+.+.+++. .. +
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~--------------------------~~---v 233 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICET----FPKLKCIVFDR-PQVVENLSGS--------------------------NN---L 233 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHTTCCCB--------------------------TT---E
T ss_pred cCceEEEeCCCccHHHHHHHHH----CCCCeEEEeeC-HHHHhhcccC--------------------------CC---c
Confidence 4689999999999999999985 34779999999 7766544321 11 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcC-CCCCCcHH--HHHHHHHccCCC---CeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDA-GHDFNSAW--ADINRAWRILRP---GGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~v~--~dl~~~~~lL~p---GGvIi~dD~~~ 290 (327)
++..+|..+.++ .||+|++-. -|...+.. ..++.+.+.|+| ||.+++.|...
T Consensus 234 ~~~~~d~~~~~p----~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 234 TYVGGDMFTSIP----NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp EEEECCTTTCCC----CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred EEEeccccCCCC----CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 777787655322 399999754 35444433 789999999999 99998888765
No 247
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.42 E-value=6e-07 Score=86.32 Aligned_cols=97 Identities=19% Similarity=0.158 Sum_probs=71.9
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||||||+|..+..+++. .++.+++++|. +.+.+.+++. .+ |+
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~--------------------------~~---v~ 249 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAK----YPSINAINFDL-PHVIQDAPAF--------------------------SG---VE 249 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHTTCCCC--------------------------TT---EE
T ss_pred CCEEEEeCCCcCHHHHHHHHh----CCCCEEEEEeh-HHHHHhhhhc--------------------------CC---CE
Confidence 579999999999999999985 35789999999 6555443321 12 78
Q ss_pred eeecchhhhhhhcCCcEeEEEEcC-CCCCCc--HHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 236 FSSGSALTKLCEWGVVGDLIEIDA-GHDFNS--AWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~--v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+..+|..+.++ .. |+|++-. -|.+.+ ....|+++.+.|+|||.|++.|...
T Consensus 250 ~~~~d~~~~~p---~~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 250 HLGGDMFDGVP---KG-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp EEECCTTTCCC---CC-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred EEecCCCCCCC---CC-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 88888766333 22 9998754 453433 3467899999999999999888775
No 248
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.41 E-value=6.3e-07 Score=84.56 Aligned_cols=115 Identities=12% Similarity=0.021 Sum_probs=73.3
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeC----CCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDD----FRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~----~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
..+|||||||+|..+..+|+. ++|++||. .+++.+.... + .. +. +.
T Consensus 83 g~~VLDlGcG~G~~s~~la~~-------~~V~gvD~~~~~~~~~~~~~~~--~----------------~~---~~-~~- 132 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL-------KNVREVKGLTKGGPGHEEPIPM--S----------------TY---GW-NL- 132 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS-------TTEEEEEEECCCSTTSCCCCCC--C----------------ST---TG-GG-
T ss_pred CCEEEEEcCCCCHHHHHHHhc-------CCEEEEeccccCchhHHHHHHh--h----------------hc---CC-CC-
Confidence 369999999999999999872 68999999 4443321110 0 00 00 11
Q ss_pred cceEeeec-chhhhhhhcCCcEeEEEEcCCCCC-Cc------HHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHH
Q 041517 232 LPVPFSSG-SALTKLCEWGVVGDLIEIDAGHDF-NS------AWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNL 303 (327)
Q Consensus 232 ~~V~~~~g-da~~~L~~l~~~fDLIfIDa~h~~-~~------v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~ 303 (327)
|.+..+ |..+. + ..+||+|+.|+.... .. ....|+.+.+.|+|||.+++..+. +..+.+.+.+..
T Consensus 133 --v~~~~~~D~~~l-~--~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~--~~~~~~~~~l~~ 205 (305)
T 2p41_A 133 --VRLQSGVDVFFI-P--PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN--PYMSSVIEKMEA 205 (305)
T ss_dssp --EEEECSCCTTTS-C--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC--CCSHHHHHHHHH
T ss_pred --eEEEeccccccC-C--cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC--CCCchHHHHHHH
Confidence 677777 65442 2 368999999976421 11 124678888999999999985443 333555566665
Q ss_pred HHHH
Q 041517 304 FAKI 307 (327)
Q Consensus 304 f~~~ 307 (327)
+...
T Consensus 206 l~~~ 209 (305)
T 2p41_A 206 LQRK 209 (305)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 249
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.39 E-value=9.2e-07 Score=87.07 Aligned_cols=131 Identities=10% Similarity=0.085 Sum_probs=85.6
Q ss_pred HHHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 145 AVFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 145 ~lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++..+++.. +..+|||+|||+|..++.+|+. ..+|+++|.++.+.+.|++ |
T Consensus 273 ~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~------~~~V~gvD~s~~al~~A~~-------------------n 327 (433)
T 1uwv_A 273 KMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ------AASVVGVEGVPALVEKGQQ-------------------N 327 (433)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT------SSEEEEEESCHHHHHHHHH-------------------H
T ss_pred HHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh------CCEEEEEeCCHHHHHHHHH-------------------H
Confidence 3455544433 3579999999999999999973 6899999999999988876 3
Q ss_pred HhhhccCCcccceEeeecchhhhhhh---cCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHH
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTKLCE---WGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVR 298 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~L~~---l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~ 298 (327)
+...+.. + +.+..+++.+.++. .+..||+|++|-.-.. ....++.+ ..++|++++.+.- .. .-..
T Consensus 328 ~~~~~~~-~---v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g--~~~~~~~l-~~~~p~~ivyvsc-~p----~tla 395 (433)
T 1uwv_A 328 ARLNGLQ-N---VTFYHENLEEDVTKQPWAKNGFDKVLLDPARAG--AAGVMQQI-IKLEPIRIVYVSC-NP----ATLA 395 (433)
T ss_dssp HHHTTCC-S---EEEEECCTTSCCSSSGGGTTCCSEEEECCCTTC--CHHHHHHH-HHHCCSEEEEEES-CH----HHHH
T ss_pred HHHcCCC-c---eEEEECCHHHHhhhhhhhcCCCCEEEECCCCcc--HHHHHHHH-HhcCCCeEEEEEC-Ch----HHHH
Confidence 3333332 2 88899988775443 2468999999854322 22334433 3478999887632 21 1233
Q ss_pred HHHHHHHHHcCCeEE
Q 041517 299 RAVNLFAKINGLKVQ 313 (327)
Q Consensus 299 ~Av~~f~~~~gl~v~ 313 (327)
+-...+. +.|+++.
T Consensus 396 rd~~~l~-~~Gy~~~ 409 (433)
T 1uwv_A 396 RDSEALL-KAGYTIA 409 (433)
T ss_dssp HHHHHHH-HTTCEEE
T ss_pred hhHHHHH-HCCcEEE
Confidence 4444443 3466653
No 250
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.33 E-value=3.4e-06 Score=79.21 Aligned_cols=92 Identities=16% Similarity=-0.089 Sum_probs=63.8
Q ss_pred CCEEEEEcCcc------hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCC
Q 041517 156 PRVIIEVGSFL------GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAID 229 (327)
Q Consensus 156 p~~VLEIGt~~------G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~ 229 (327)
..+|||+|||+ |. ..+++. ++++++|+++|+++. . . +
T Consensus 64 g~~VLDLGcGsg~~~GpGs--~~~a~~---~~~~~~V~gvDis~~-v----~-------------------~-------- 106 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT--AVLRQW---LPTGTLLVDSDLNDF-V----S-------------------D-------- 106 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHH---SCTTCEEEEEESSCC-B----C-------------------S--------
T ss_pred CCEEEEeCCCCCCCCCcHH--HHHHHH---cCCCCEEEEEECCCC-C----C-------------------C--------
Confidence 46999999955 65 444543 566799999999887 1 0 1
Q ss_pred cccceEe-eecchhhhhhhcCCcEeEEEEcCCCCC------------CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 230 SVLPVPF-SSGSALTKLCEWGVVGDLIEIDAGHDF------------NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 230 ~v~~V~~-~~gda~~~L~~l~~~fDLIfIDa~h~~------------~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
+.+ ..+|..+. + ..++||+|+.|..... ......++++.+.|+|||.+++..+..
T Consensus 107 ----v~~~i~gD~~~~-~-~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 107 ----ADSTLIGDCATV-H-TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp ----SSEEEESCGGGC-C-CSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred ----CEEEEECccccC-C-ccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 445 66766542 1 2367999999854321 112367899999999999999977654
No 251
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.33 E-value=8.2e-07 Score=85.31 Aligned_cols=98 Identities=15% Similarity=0.122 Sum_probs=72.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .++.+++++|. +.+.+.+++. ++ |
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~--------------------------~~---v 246 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAH----YPTIKGVNFDL-PHVISEAPQF--------------------------PG---V 246 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH----CTTCEEEEEEC-HHHHTTCCCC--------------------------TT---E
T ss_pred CCCEEEEeCCCCCHHHHHHHHH----CCCCeEEEecC-HHHHHhhhhc--------------------------CC---e
Confidence 3579999999999999999985 35789999999 5554433220 12 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcC-CCCC--CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDA-GHDF--NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa-~h~~--~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
++..+|..+.++ .. |+|++-. -|.+ +.....|+.+.+.|+|||.+++.|...
T Consensus 247 ~~~~~D~~~~~p---~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 247 THVGGDMFKEVP---SG-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp EEEECCTTTCCC---CC-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred EEEeCCcCCCCC---CC-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 888888766333 22 9998754 4544 334567999999999999999888775
No 252
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.32 E-value=9.9e-07 Score=83.83 Aligned_cols=107 Identities=14% Similarity=0.065 Sum_probs=75.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccC-CCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQL-GLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l-~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
+..+|||+|||+|..++.+++.++.. +...+++++|+++.+.+.|+. |+...|. .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~-------------------n~~~~g~-----~ 185 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALV-------------------GADLQRQ-----K 185 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHH-------------------HHHHHTC-----C
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHH-------------------HHHhCCC-----C
Confidence 45799999999999999999864321 113799999999998888766 3333333 1
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCC-------------------cHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFN-------------------SAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~-------------------~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.+..+|+.+.. ...+||+|+.+....+. .....++.+.++|+|||++++.-
T Consensus 186 ~~i~~~D~l~~~--~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 186 MTLLHQDGLANL--LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CEEEESCTTSCC--CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEECCCCCcc--ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 677788876532 24789999987542110 11246889999999999877654
No 253
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.32 E-value=1.2e-06 Score=81.60 Aligned_cols=75 Identities=13% Similarity=0.068 Sum_probs=55.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. +.+|++||+++.+.+.+++. +...+..++ +
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~------~~~v~~vD~~~~~~~~a~~~-------------------~~~~~~~~~---v 79 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEK------AKKVVACELDPRLVAELHKR-------------------VQGTPVASK---L 79 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH------SSEEEEEESCHHHHHHHHHH-------------------HTTSTTGGG---E
T ss_pred CCCEEEEEcCcccHHHHHHHhh------CCEEEEEECCHHHHHHHHHH-------------------HHhcCCCCc---e
Confidence 4579999999999999999985 57999999999988877653 221121122 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG 260 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~ 260 (327)
.+..+|+.+. .+ ..||+|+.+..
T Consensus 80 ~~~~~D~~~~--~~-~~fD~vv~nlp 102 (285)
T 1zq9_A 80 QVLVGDVLKT--DL-PFFDTCVANLP 102 (285)
T ss_dssp EEEESCTTTS--CC-CCCSEEEEECC
T ss_pred EEEEcceecc--cc-hhhcEEEEecC
Confidence 8888887653 12 37899998644
No 254
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.23 E-value=4.6e-06 Score=78.48 Aligned_cols=96 Identities=11% Similarity=0.141 Sum_probs=65.6
Q ss_pred HHHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 145 AVFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 145 ~lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
.++..+++.. +..+|||||||+|+.|..+++. ..+|++||+++.+.+.+++.
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~------~~~V~aVEid~~li~~a~~~------------------- 91 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN------AKKVYVIEIDKSLEPYANKL------------------- 91 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCGGGHHHHHHH-------------------
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc------CCEEEEEECCHHHHHHHHHH-------------------
Confidence 3445554443 3579999999999999999985 68999999999999877652
Q ss_pred HhhhccCCcccceEeeecchhhh-hhhcCCcEeEEEEcCCCCCCcHHHHHHHHHc
Q 041517 222 VIYQNAIDSVLPVPFSSGSALTK-LCEWGVVGDLIEIDAGHDFNSAWADINRAWR 275 (327)
Q Consensus 222 v~~~g~~~~v~~V~~~~gda~~~-L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~ 275 (327)
+... ++ +.+..+|+.+. ++ ..+||.|+.+ .+|+.....+..+++
T Consensus 92 ~~~~---~~---v~vi~gD~l~~~~~--~~~fD~Iv~N--lPy~is~pil~~lL~ 136 (295)
T 3gru_A 92 KELY---NN---IEIIWGDALKVDLN--KLDFNKVVAN--LPYQISSPITFKLIK 136 (295)
T ss_dssp HHHC---SS---EEEEESCTTTSCGG--GSCCSEEEEE--CCGGGHHHHHHHHHH
T ss_pred hccC---CC---eEEEECchhhCCcc--cCCccEEEEe--CcccccHHHHHHHHh
Confidence 2211 12 88889988763 22 2469999954 445443344444443
No 255
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.23 E-value=1.8e-06 Score=80.22 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=90.2
Q ss_pred HHHHHHHhhc-CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 145 AVFGNLIDKV-RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 145 ~lL~~L~~~~-~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
.|+..+.... .|.+|||||||+|-.++.++. ..+..+++++|+++.+.+++++ |+.
T Consensus 121 ~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~----~~p~a~y~a~DId~~~le~a~~-------------------~l~ 177 (281)
T 3lcv_B 121 EFYRELFRHLPRPNTLRDLACGLNPLAAPWMG----LPAETVYIASDIDARLVGFVDE-------------------ALT 177 (281)
T ss_dssp HHHHHHGGGSCCCSEEEETTCTTGGGCCTTTT----CCTTCEEEEEESBHHHHHHHHH-------------------HHH
T ss_pred HHHHHHHhccCCCceeeeeccCccHHHHHHHh----hCCCCEEEEEeCCHHHHHHHHH-------------------HHH
Confidence 3444444443 489999999999999998886 4579999999999999998876 444
Q ss_pred hhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC-CCC--CcHHHHHHHHHccCCCCeEEEEEcCCC-CCCchh---
Q 041517 224 YQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-HDF--NSAWADINRAWRILRPGGVIFGHDYFT-AADNRG--- 296 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-h~~--~~v~~dl~~~~~lL~pGGvIi~dD~~~-~~~~~G--- 296 (327)
..|.. .++...|-.. ....+++|++++-=. |-- +.--..+ .++..|++||++|--+... ....+|
T Consensus 178 ~~g~~-----~~~~v~D~~~--~~p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~ 249 (281)
T 3lcv_B 178 RLNVP-----HRTNVADLLE--DRLDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQ 249 (281)
T ss_dssp HTTCC-----EEEEECCTTT--SCCCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHH
T ss_pred hcCCC-----ceEEEeeecc--cCCCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhh
Confidence 43432 3444444332 223588999986322 100 0001234 7888999999999888832 123344
Q ss_pred -HHHHHHHHHHHcCCeEEE
Q 041517 297 -VRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 297 -V~~Av~~f~~~~gl~v~~ 314 (327)
..+-++..+.+.|+.++.
T Consensus 250 ~Y~~~~e~~~~~~g~~~~~ 268 (281)
T 3lcv_B 250 NYSQSFESQARERSCRIQR 268 (281)
T ss_dssp HHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhcCCceee
Confidence 556667777778887653
No 256
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.22 E-value=3.1e-06 Score=81.70 Aligned_cols=95 Identities=19% Similarity=0.091 Sum_probs=67.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||+|||+|..++.+++. .++..+++++|+++.+.+.|. + +
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~---~~~~~~i~gvDi~~~~~~~a~-----------------------------~---~ 83 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREA---HGTAYRFVGVEIDPKALDLPP-----------------------------W---A 83 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHH---HCSCSEEEEEESCTTTCCCCT-----------------------------T---E
T ss_pred CCCEEEECCCCChHHHHHHHHH---hCCCCeEEEEECCHHHHHhCC-----------------------------C---C
Confidence 4579999999999999999985 334689999999998876441 1 5
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCC----C--------CCcH------------------HHHHHHHHccCCCCeEEE
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGH----D--------FNSA------------------WADINRAWRILRPGGVIF 284 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h----~--------~~~v------------------~~dl~~~~~lL~pGGvIi 284 (327)
.+..+|..+.. ..+.||+|+.+--. . .... ...++.+.++|+|||+++
T Consensus 84 ~~~~~D~~~~~--~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~ 161 (421)
T 2ih2_A 84 EGILADFLLWE--PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLV 161 (421)
T ss_dssp EEEESCGGGCC--CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEE
T ss_pred cEEeCChhhcC--ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEE
Confidence 66677765532 23689999985110 0 0111 134788999999999766
Q ss_pred EE
Q 041517 285 GH 286 (327)
Q Consensus 285 ~d 286 (327)
+-
T Consensus 162 ~i 163 (421)
T 2ih2_A 162 FV 163 (421)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 257
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.22 E-value=1.3e-06 Score=83.15 Aligned_cols=98 Identities=13% Similarity=0.151 Sum_probs=72.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. .++.+++++|. +.+.+.+++. .. |
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~----~p~~~~~~~D~-~~~~~~a~~~--------------------------~~---v 238 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEI----FPHLKCTVFDQ-PQVVGNLTGN--------------------------EN---L 238 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH----CTTSEEEEEEC-HHHHSSCCCC--------------------------SS---E
T ss_pred CCCEEEEECCCcCHHHHHHHHH----CCCCeEEEecc-HHHHhhcccC--------------------------CC---c
Confidence 5689999999999999999985 35779999998 5554433220 11 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcC-CCCCCc--HHHHHHHHHccCCC---CeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDA-GHDFNS--AWADINRAWRILRP---GGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa-~h~~~~--v~~dl~~~~~lL~p---GGvIi~dD~~~ 290 (327)
++..+|..+.+ + .||+|++-. -|.+.+ ....++.+.+.|+| ||.+++.|...
T Consensus 239 ~~~~~d~~~~~---~-~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 239 NFVGGDMFKSI---P-SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp EEEECCTTTCC---C-CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred EEEeCccCCCC---C-CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 77778765522 2 499999754 354544 33789999999999 99888877764
No 258
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.22 E-value=2.5e-06 Score=88.07 Aligned_cols=105 Identities=13% Similarity=0.037 Sum_probs=78.2
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|++||||+|-.....+++.+..+...+||+||-++ ++..+++ .+...++.++ |.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~-------------------~v~~N~~~dk---Vt 414 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLE-------------------NWQFEEWGSQ---VT 414 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHH-------------------HHHHHTTGGG---EE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHH-------------------HHHhccCCCe---EE
Confidence 35799999999998666666544444455899999986 5555554 3334456666 99
Q ss_pred eeecchhhhhhhcCCcEeEEEEc---CCCCCCcHHHHHHHHHccCCCCeEEEE
Q 041517 236 FSSGSALTKLCEWGVVGDLIEID---AGHDFNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfID---a~h~~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
+++|+..+. .+++++|+|+.. ....++.+...+....+.|+|||+++=
T Consensus 415 VI~gd~eev--~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 415 VVSSDMREW--VAPEKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp EEESCTTTC--CCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred EEeCcceec--cCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 999998884 456899999954 445567788888888999999999863
No 259
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.19 E-value=9.5e-07 Score=86.84 Aligned_cols=74 Identities=16% Similarity=0.100 Sum_probs=59.8
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh--ccCCcccc
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ--NAIDSVLP 233 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~--g~~~~v~~ 233 (327)
..+|||+|||+|..++.+|+. +.+|++||.++.+.+.+++ |+... |. ++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~------g~~V~~VD~s~~~l~~Ar~-------------------N~~~~~~gl-~~--- 144 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK------ASQGIYIERNDETAVAARH-------------------NIPLLLNEG-KD--- 144 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT------CSEEEEEESCHHHHHHHHH-------------------HHHHHSCTT-CE---
T ss_pred CCEEEEeCCCchHHHHHHHhc------CCEEEEEECCHHHHHHHHH-------------------hHHHhccCC-Cc---
Confidence 689999999999999999874 6799999999999998877 44333 33 23
Q ss_pred eEeeecchhhhhhhc-CCcEeEEEEc
Q 041517 234 VPFSSGSALTKLCEW-GVVGDLIEID 258 (327)
Q Consensus 234 V~~~~gda~~~L~~l-~~~fDLIfID 258 (327)
+.+..+|+.+.++.. +.+||+||+|
T Consensus 145 i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 145 VNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp EEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred EEEEECcHHHhhhhccCCCceEEEEC
Confidence 889999998866543 3589999999
No 260
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.19 E-value=3.6e-06 Score=80.44 Aligned_cols=105 Identities=17% Similarity=0.160 Sum_probs=75.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+.++|||||||.|..++.+++. .|+.+++.+|. +.+.+.+++.. .. +..++ |
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~----~p~~~~~~~dl-p~v~~~a~~~~-------------------~~-~~~~r---v 230 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSL----YPGCKITVFDI-PEVVWTAKQHF-------------------SF-QEEEQ---I 230 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHH----CSSCEEEEEEC-HHHHHHHHHHS-------------------CC---CCS---E
T ss_pred cCCeEEeeCCCCCHHHHHHHHh----CCCceeEeccC-HHHHHHHHHhh-------------------hh-cccCc---e
Confidence 4579999999999999999985 45789999997 55666555432 11 12345 8
Q ss_pred EeeecchhhhhhhcCCcEeEEEEc-CCCCCCc--HHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEID-AGHDFNS--AWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfID-a~h~~~~--v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
++..+|..+. ....+|+|++- .-|.+++ ....|+.+.+.|+|||.|++.|...
T Consensus 231 ~~~~gD~~~~---~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 231 DFQEGDFFKD---PLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp EEEESCTTTS---CCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred eeecCccccC---CCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 8988886542 22457988864 4565544 3566899999999999888877765
No 261
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.11 E-value=2.7e-06 Score=79.75 Aligned_cols=74 Identities=15% Similarity=0.187 Sum_probs=51.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..+..+++. +.+|++||+++.+.+.+++. +...+. ++ +
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~------~~~v~~vDi~~~~~~~a~~~-------------------~~~~~~-~~---v 92 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPL------AKKVITIDIDSRMISEVKKR-------------------CLYEGY-NN---L 92 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTT------SSEEEEECSCHHHHHHHHHH-------------------HHHTTC-CC---E
T ss_pred CcCEEEEEcCcCcHHHHHHHhc------CCEEEEEECCHHHHHHHHHH-------------------HHHcCC-Cc---e
Confidence 4579999999999999999873 57999999999998877652 222222 22 7
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAG 260 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~ 260 (327)
.+..+|+.+. + ...||+|+.|..
T Consensus 93 ~~~~~D~~~~-~--~~~~D~Vv~n~p 115 (299)
T 2h1r_A 93 EVYEGDAIKT-V--FPKFDVCTANIP 115 (299)
T ss_dssp EC----CCSS-C--CCCCSEEEEECC
T ss_pred EEEECchhhC-C--cccCCEEEEcCC
Confidence 7777776552 1 247999998754
No 262
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.09 E-value=6.4e-06 Score=77.68 Aligned_cols=79 Identities=18% Similarity=0.077 Sum_probs=59.8
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+.++|||+|||+|..++.+++. .+ +++|++||.++.+.+.++++ +...+ ++ +
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~---~~-~~~VigvD~d~~al~~A~~~-------------------~~~~g--~~---v 77 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEH---CP-GCRIIGIDVDSEVLRIAEEK-------------------LKEFS--DR---V 77 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHH---CT-TCEEEEEESCHHHHHHHHHH-------------------TGGGT--TT---E
T ss_pred CCCEEEEEeCCcCHHHHHHHHH---CC-CCEEEEEECCHHHHHHHHHH-------------------HHhcC--Cc---E
Confidence 4579999999999999999985 34 78999999999999888763 22222 23 7
Q ss_pred Eeeecchhhh---hhhcC-CcEeEEEEcCCC
Q 041517 235 PFSSGSALTK---LCEWG-VVGDLIEIDAGH 261 (327)
Q Consensus 235 ~~~~gda~~~---L~~l~-~~fDLIfIDa~h 261 (327)
.+..++..+. +...+ .+||.|++|...
T Consensus 78 ~~v~~d~~~l~~~l~~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 78 SLFKVSYREADFLLKTLGIEKVDGILMDLGV 108 (301)
T ss_dssp EEEECCGGGHHHHHHHTTCSCEEEEEEECSC
T ss_pred EEEECCHHHHHHHHHhcCCCCCCEEEEcCcc
Confidence 8888886653 22223 589999999754
No 263
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.06 E-value=4.9e-06 Score=84.60 Aligned_cols=101 Identities=15% Similarity=0.056 Sum_probs=69.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+|.+|||||||.|..+..||+. +.+|++||.++.++++|+... ...| .+.|
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~------ga~V~giD~~~~~i~~a~~~a-------------------~~~~----~~~~ 116 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK------GATIVGIDFQQENINVCRALA-------------------EENP----DFAA 116 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHH-------------------HTST----TSEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC------CCEEEEECCCHHHHHHHHHHH-------------------HhcC----CCce
Confidence 5789999999999999999994 789999999999998887532 1111 1238
Q ss_pred Eeeecchhhhhhhc-CCcEeEEEEcCCCCC---CcHHHHHHHHHccCCCCeEEE
Q 041517 235 PFSSGSALTKLCEW-GVVGDLIEIDAGHDF---NSAWADINRAWRILRPGGVIF 284 (327)
Q Consensus 235 ~~~~gda~~~L~~l-~~~fDLIfIDa~h~~---~~v~~dl~~~~~lL~pGGvIi 284 (327)
++..+++.+..... ++.||+|..=.-... +.....+..++..|+++|...
T Consensus 117 ~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 117 EFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAV 170 (569)
T ss_dssp EEEECCHHHHHHHCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEE
T ss_pred EEEECCHHHHhhhccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhcccccee
Confidence 88899988765443 578999986433211 011223445666777776433
No 264
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.05 E-value=4.5e-05 Score=73.66 Aligned_cols=146 Identities=14% Similarity=0.033 Sum_probs=93.9
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ 225 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~ 225 (327)
+...++......+|||++++-|.=|+.||+. ..+++|+++|+++.-....++ |+...
T Consensus 139 l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~----~~~~~l~A~D~~~~R~~~l~~-------------------~l~r~ 195 (359)
T 4fzv_A 139 LPVLALGLQPGDIVLDLCAAPGGKTLALLQT----GCCRNLAANDLSPSRIARLQK-------------------ILHSY 195 (359)
T ss_dssp HHHHHHCCCTTEEEEESSCTTCHHHHHHHHT----TCEEEEEEECSCHHHHHHHHH-------------------HHHHH
T ss_pred HHHHHhCCCCCCEEEEecCCccHHHHHHHHh----cCCCcEEEEcCCHHHHHHHHH-------------------HHHHh
Confidence 3344444444569999999999999999984 457899999998654332222 34333
Q ss_pred ccCCc--ccceEeeecchhhhhhhcCCcEeEEEEcCCCCCC---------c----------------HHHHHHHHHccCC
Q 041517 226 NAIDS--VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFN---------S----------------AWADINRAWRILR 278 (327)
Q Consensus 226 g~~~~--v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~---------~----------------v~~dl~~~~~lL~ 278 (327)
+.... ...+.....|+...-...++.||.|.+|+--+.. . -.+-|+.++++|+
T Consensus 196 ~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk 275 (359)
T 4fzv_A 196 VPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATK 275 (359)
T ss_dssp SCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEE
T ss_pred hhhhhccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 32110 0127777777766433346789999999653321 0 1244678899999
Q ss_pred CCeEEEEEcCCCCC-Cchh-HHHHHHHHHHHcCCeEEE
Q 041517 279 PGGVIFGHDYFTAA-DNRG-VRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 279 pGGvIi~dD~~~~~-~~~G-V~~Av~~f~~~~gl~v~~ 314 (327)
|||+||-..+-..+ +..+ |..+++.+.+...+.+..
T Consensus 276 pGG~LVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~ 313 (359)
T 4fzv_A 276 PGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQV 313 (359)
T ss_dssp EEEEEEEEESCCCTTTTHHHHHHHHHHHHHHHCCCEEE
T ss_pred CCcEEEEEeCCCchhhCHHHHHHHHHhCCCCccccccc
Confidence 99999988887643 2233 566666665555665554
No 265
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.03 E-value=1.6e-07 Score=85.07 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=36.3
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~ 201 (327)
+..+|||||||+|..+..+++. +.+|++||+++.+.+.+++
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~------~~~v~~id~~~~~~~~a~~ 69 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKI------SKQVTSIELDSHLFNLSSE 69 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHH------SSEEEESSSSCSSSSSSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHh------CCeEEEEECCHHHHHHHHH
Confidence 4568999999999999999985 4899999999999987765
No 266
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.03 E-value=6e-06 Score=81.40 Aligned_cols=117 Identities=13% Similarity=0.112 Sum_probs=77.0
Q ss_pred HHHHHHhhcC---CCEEEEEcCcchHHHHHHHHHhccCC---------CCcEEEEEeCCCCChhhhhhhcccCccccchH
Q 041517 146 VFGNLIDKVR---PRVIIEVGSFLGASALHMANLTRQLG---------LDSQILCIDDFRGWPGFRDKFKEIPMVNGNVL 213 (327)
Q Consensus 146 lL~~L~~~~~---p~~VLEIGt~~G~Sal~lA~a~r~l~---------~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~ 213 (327)
+...+++... ..+|+|.|||+|...+.+++.++... ...+++++|+++.+...|+.
T Consensus 159 v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~------------ 226 (445)
T 2okc_A 159 LIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASM------------ 226 (445)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHH------------
T ss_pred HHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHH------------
Confidence 4444444433 46899999999999999988654221 24679999999988887765
Q ss_pred HHHHHHHHHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC------------------CcHHHHHHHHHc
Q 041517 214 LYFQFLQNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF------------------NSAWADINRAWR 275 (327)
Q Consensus 214 ~~~~Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~------------------~~v~~dl~~~~~ 275 (327)
|+...|.... .+.+..+|+.... ...+||+|+.+-.... ......++.+++
T Consensus 227 -------nl~l~g~~~~--~~~i~~gD~l~~~--~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 295 (445)
T 2okc_A 227 -------NLYLHGIGTD--RSPIVCEDSLEKE--PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMML 295 (445)
T ss_dssp -------HHHHTTCCSS--CCSEEECCTTTSC--CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHH
T ss_pred -------HHHHhCCCcC--CCCEeeCCCCCCc--ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHH
Confidence 4433343210 1566778776532 2348999998632100 012467899999
Q ss_pred cCCCCeEEEE
Q 041517 276 ILRPGGVIFG 285 (327)
Q Consensus 276 lL~pGGvIi~ 285 (327)
+|+|||.+++
T Consensus 296 ~Lk~gG~~a~ 305 (445)
T 2okc_A 296 MLKTGGRAAV 305 (445)
T ss_dssp HEEEEEEEEE
T ss_pred HhccCCEEEE
Confidence 9999997765
No 267
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.03 E-value=2e-05 Score=71.53 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=41.3
Q ss_pred HHHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhh
Q 041517 145 AVFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 145 ~lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~ 201 (327)
.++..+++.. +..+|||||||+|..+..+++. ..+|++||.++.+.+.+++
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~------~~~v~~vD~~~~~~~~a~~ 70 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR------CNFVTAIEIDHKLCKTTEN 70 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH------SSEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc------CCeEEEEECCHHHHHHHHH
Confidence 4555555544 3578999999999999999985 4899999999999887765
No 268
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.98 E-value=7.6e-06 Score=75.24 Aligned_cols=124 Identities=13% Similarity=0.100 Sum_probs=74.2
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY 224 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~ 224 (327)
.|...+.....|.+|||||||.|-.++.++ +..+++++|+++++.++++++ +..
T Consensus 95 ~fY~~i~~~~~p~~VLDlGCG~gpLal~~~-------~~~~y~a~DId~~~i~~ar~~-------------------~~~ 148 (253)
T 3frh_A 95 TLYDFIFSAETPRRVLDIACGLNPLALYER-------GIASVWGCDIHQGLGDVITPF-------------------ARE 148 (253)
T ss_dssp HHHHHHTSSCCCSEEEEETCTTTHHHHHHT-------TCSEEEEEESBHHHHHHHHHH-------------------HHH
T ss_pred HHHHHHhcCCCCCeEEEecCCccHHHHHhc-------cCCeEEEEeCCHHHHHHHHHH-------------------HHh
Confidence 344444544468999999999998888766 389999999999999988763 222
Q ss_pred hccCCcccceEeeecchhhhhhhcCCcEeEEEE-cCCCCCCc-HHHHHHHHHccCCCCeEEEEEcCCC-CCCchhHHHHH
Q 041517 225 QNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEI-DAGHDFNS-AWADINRAWRILRPGGVIFGHDYFT-AADNRGVRRAV 301 (327)
Q Consensus 225 ~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfI-Da~h~~~~-v~~dl~~~~~lL~pGGvIi~dD~~~-~~~~~GV~~Av 301 (327)
.|. +..+...|.... ...+++|+|++ +.-|--+. -......++..|++++++|--+... +..-+|+.+..
T Consensus 149 ~g~-----~~~~~v~D~~~~--~~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y 221 (253)
T 3frh_A 149 KDW-----DFTFALQDVLCA--PPAEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANY 221 (253)
T ss_dssp TTC-----EEEEEECCTTTS--CCCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEECC-----------CH
T ss_pred cCC-----CceEEEeecccC--CCCCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHH
Confidence 221 255656654442 23579999965 33221100 0012237777899999999877332 23334544333
No 269
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.98 E-value=7.5e-06 Score=75.33 Aligned_cols=87 Identities=11% Similarity=0.071 Sum_probs=59.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|||||||+|..|..+++. ..+|++||.++.+.+.+++. +.. .++ +
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~------~~~V~avEid~~~~~~~~~~-------------------~~~---~~~---v 77 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTE------CDNLALVEIDRDLVAFLQKK-------------------YNQ---QKN---I 77 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTT------SSEEEEEECCHHHHHHHHHH-------------------HTT---CTT---E
T ss_pred CcCEEEEEcccccHHHHHHHHh------CCEEEEEECCHHHHHHHHHH-------------------Hhh---CCC---c
Confidence 4578999999999999999974 47999999999998877653 211 112 7
Q ss_pred Eeeecchhhh-hhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHc
Q 041517 235 PFSSGSALTK-LCEW--GVVGDLIEIDAGHDFNSAWADINRAWR 275 (327)
Q Consensus 235 ~~~~gda~~~-L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~ 275 (327)
.+..+|+.+. ++.+ +.+||+| ++.+|+-....+..++.
T Consensus 78 ~~i~~D~~~~~~~~~~~~~~~~vv---~NlPY~is~~il~~ll~ 118 (255)
T 3tqs_A 78 TIYQNDALQFDFSSVKTDKPLRVV---GNLPYNISTPLLFHLFS 118 (255)
T ss_dssp EEEESCTTTCCGGGSCCSSCEEEE---EECCHHHHHHHHHHHHH
T ss_pred EEEEcchHhCCHHHhccCCCeEEE---ecCCcccCHHHHHHHHh
Confidence 8888888774 3443 3578843 33455443344444444
No 270
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.94 E-value=1.8e-05 Score=76.90 Aligned_cols=111 Identities=13% Similarity=0.040 Sum_probs=78.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhc-cCCcccc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQN-AIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g-~~~~v~~ 233 (327)
.|++||-||-|.|..+..+.+ .+ ..+|+.||+++...+.++++.... ..-.... ..++
T Consensus 205 ~pkrVLIIGgGdG~~~revlk----h~-~~~V~~VEIDp~VVe~ar~yfp~~-------------~~~~~d~pr~~r--- 263 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVK----LK-PKMVTMVEIDQMVIDGCKKYMRKT-------------CGDVLDNLKGDC--- 263 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHT----TC-CSEEEEEESCHHHHHHHHHHCCC-----------------CCSSSEETT---
T ss_pred CCCeEEEECCCcHHHHHHHHh----cC-CceeEEEccCHHHHHHHHhhchhh-------------hhhhhccccccc---
Confidence 479999999999999888776 34 479999999999999998864200 0000000 1122
Q ss_pred eEeeecchhhhhhh---cCCcEeEEEEcCCCCC-------Cc----HHHHHHHHHccCCCCeEEEEE
Q 041517 234 VPFSSGSALTKLCE---WGVVGDLIEIDAGHDF-------NS----AWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 234 V~~~~gda~~~L~~---l~~~fDLIfIDa~h~~-------~~----v~~dl~~~~~lL~pGGvIi~d 286 (327)
+++..+|+.+.+.. -+.+||+|++|..-.. .. ....++.+.+.|+|||+++..
T Consensus 264 v~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 264 YQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp EEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 78889999988754 2568999999963211 01 234578889999999999975
No 271
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.91 E-value=0.00012 Score=69.21 Aligned_cols=141 Identities=16% Similarity=0.080 Sum_probs=83.2
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEE--EEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQI--LCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V--~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
.-+|+|+|-|+|++++...+.+....+..++ +++|-.+- . .+..... ....+.+.+.+++... ..++ +.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl--~---~~~~~~~--~~~~l~~~l~~~~p~~-~~~~-v~ 167 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELL--K---EFPILPE--PYREIHEFLLERVPEY-EGER-LS 167 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCC--S---CCCCCCT--TSHHHHHHHHHHCSEE-ECSS-EE
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHH--H---hhHhchH--hHHHHHHHHHHhCccc-cCCc-EE
Confidence 4589999999999976654443334555554 66665331 0 0000000 0011111222222211 1122 33
Q ss_pred eEeeecchhhhhhhcC-CcEeEEEEcCCCC--CCcHH--HHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHc
Q 041517 234 VPFSSGSALTKLCEWG-VVGDLIEIDAGHD--FNSAW--ADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKIN 308 (327)
Q Consensus 234 V~~~~gda~~~L~~l~-~~fDLIfIDa~h~--~~~v~--~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~ 308 (327)
+.+..||+.+.|+.+. ..+|+||.||--+ ++.+| ..++.+.++++|||+++. |.. ..+|+.-+..-
T Consensus 168 L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT--Yta-------ag~VRR~L~~a 238 (308)
T 3vyw_A 168 LKVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS--YSS-------SLSVRKSLLTL 238 (308)
T ss_dssp EEEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SCC-------CHHHHHHHHHT
T ss_pred EEEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE--EeC-------cHHHHHHHHHC
Confidence 6778899999999875 4899999998532 33443 468999999999999986 443 23444445566
Q ss_pred CCeEEE
Q 041517 309 GLKVQI 314 (327)
Q Consensus 309 gl~v~~ 314 (327)
|++|..
T Consensus 239 GF~V~k 244 (308)
T 3vyw_A 239 GFKVGS 244 (308)
T ss_dssp TCEEEE
T ss_pred CCEEEe
Confidence 888763
No 272
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.91 E-value=1.6e-05 Score=77.18 Aligned_cols=82 Identities=13% Similarity=0.023 Sum_probs=62.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCC----------------------------------CcEEEEEeCCCCChhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGL----------------------------------DSQILCIDDFRGWPGFRD 200 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~----------------------------------~~~V~~ID~~~~~~~~A~ 200 (327)
+...|||.|||+|..++.+|.......| ..+|+++|+++.+.+.|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 3568999999999999999886543322 268999999999999887
Q ss_pred hhcccCccccchHHHHHHHHHHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC
Q 041517 201 KFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG 260 (327)
Q Consensus 201 ~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~ 260 (327)
+ |+...|..+. |.+..+|..+... +.+||+|+.|-.
T Consensus 275 ~-------------------Na~~~gl~~~---i~~~~~D~~~l~~--~~~~D~Iv~NPP 310 (385)
T 3ldu_A 275 E-------------------NAEIAGVDEY---IEFNVGDATQFKS--EDEFGFIITNPP 310 (385)
T ss_dssp H-------------------HHHHHTCGGG---EEEEECCGGGCCC--SCBSCEEEECCC
T ss_pred H-------------------HHHHcCCCCc---eEEEECChhhcCc--CCCCcEEEECCC
Confidence 6 5555555444 8899998877432 368999999854
No 273
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.85 E-value=3e-05 Score=75.61 Aligned_cols=82 Identities=10% Similarity=-0.037 Sum_probs=62.9
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCC----------------------------------CcEEEEEeCCCCChhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGL----------------------------------DSQILCIDDFRGWPGFRD 200 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~----------------------------------~~~V~~ID~~~~~~~~A~ 200 (327)
+...|||.|||+|..++.+|.......| ..+|+++|+++.+.+.|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 4568999999999999998886544332 267999999999998887
Q ss_pred hhcccCccccchHHHHHHHHHHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCC
Q 041517 201 KFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG 260 (327)
Q Consensus 201 ~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~ 260 (327)
+ |+...|+.+. |.+..+|+.+... ..+||+|+.|-.
T Consensus 281 ~-------------------Na~~~gl~~~---I~~~~~D~~~~~~--~~~fD~Iv~NPP 316 (393)
T 3k0b_A 281 Q-------------------NAVEAGLGDL---ITFRQLQVADFQT--EDEYGVVVANPP 316 (393)
T ss_dssp H-------------------HHHHTTCTTC---SEEEECCGGGCCC--CCCSCEEEECCC
T ss_pred H-------------------HHHHcCCCCc---eEEEECChHhCCC--CCCCCEEEECCC
Confidence 6 5666666555 8888898877422 358999999843
No 274
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.78 E-value=3.7e-05 Score=71.36 Aligned_cols=95 Identities=16% Similarity=0.124 Sum_probs=61.5
Q ss_pred HHHHHHhhc--CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHh
Q 041517 146 VFGNLIDKV--RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVI 223 (327)
Q Consensus 146 lL~~L~~~~--~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~ 223 (327)
++..+++.. .+++|||||||+|..|..+++. +.+|++||.++.+.+.+++. +.
T Consensus 35 i~~~Iv~~~~~~~~~VLEIG~G~G~lt~~L~~~------~~~V~avEid~~~~~~l~~~-------------------~~ 89 (271)
T 3fut_A 35 HLRRIVEAARPFTGPVFEVGPGLGALTRALLEA------GAEVTAIEKDLRLRPVLEET-------------------LS 89 (271)
T ss_dssp HHHHHHHHHCCCCSCEEEECCTTSHHHHHHHHT------TCCEEEEESCGGGHHHHHHH-------------------TT
T ss_pred HHHHHHHhcCCCCCeEEEEeCchHHHHHHHHHc------CCEEEEEECCHHHHHHHHHh-------------------cC
Confidence 444444432 2239999999999999999984 47899999999999877652 21
Q ss_pred hhccCCcccceEeeecchhhh-hhhcCCcEeEEEEcCCCCCCcHHHHHHHHHc
Q 041517 224 YQNAIDSVLPVPFSSGSALTK-LCEWGVVGDLIEIDAGHDFNSAWADINRAWR 275 (327)
Q Consensus 224 ~~g~~~~v~~V~~~~gda~~~-L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~ 275 (327)
. ++ +.+..+|+.+. ++.. ..+|.|+-. .+|+-....+..++.
T Consensus 90 ~----~~---v~vi~~D~l~~~~~~~-~~~~~iv~N--lPy~iss~il~~ll~ 132 (271)
T 3fut_A 90 G----LP---VRLVFQDALLYPWEEV-PQGSLLVAN--LPYHIATPLVTRLLK 132 (271)
T ss_dssp T----SS---EEEEESCGGGSCGGGS-CTTEEEEEE--ECSSCCHHHHHHHHH
T ss_pred C----CC---EEEEECChhhCChhhc-cCccEEEec--CcccccHHHHHHHhc
Confidence 1 12 78888988763 2221 246776654 334333344444443
No 275
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.78 E-value=6.9e-05 Score=72.85 Aligned_cols=81 Identities=10% Similarity=-0.020 Sum_probs=62.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCC----------------------------------CcEEEEEeCCCCChhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGL----------------------------------DSQILCIDDFRGWPGFRD 200 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~----------------------------------~~~V~~ID~~~~~~~~A~ 200 (327)
+...++|.+||+|...+..|.......| ..+|+++|.++.+.+.|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 3568999999999999998876544322 257999999999998887
Q ss_pred hhcccCccccchHHHHHHHHHHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcC
Q 041517 201 KFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDA 259 (327)
Q Consensus 201 ~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa 259 (327)
+ |+...|+.+. +.+..+|+.+... ...||+|+.|-
T Consensus 274 ~-------------------Na~~~gl~~~---I~~~~~D~~~l~~--~~~fD~Iv~NP 308 (384)
T 3ldg_A 274 K-------------------NAREVGLEDV---VKLKQMRLQDFKT--NKINGVLISNP 308 (384)
T ss_dssp H-------------------HHHHTTCTTT---EEEEECCGGGCCC--CCCSCEEEECC
T ss_pred H-------------------HHHHcCCCCc---eEEEECChHHCCc--cCCcCEEEECC
Confidence 6 6666676655 8899998877422 35899999983
No 276
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.71 E-value=4.8e-05 Score=77.14 Aligned_cols=111 Identities=10% Similarity=0.038 Sum_probs=73.1
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCC--------------CcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHH
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGL--------------DSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQN 221 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~--------------~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~n 221 (327)
..+|+|.|||+|...+.+++.++.... ...++++|+++.+..+|+. |
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~-------------------n 230 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALM-------------------N 230 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHH-------------------H
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHH-------------------H
Confidence 468999999999999999887653321 2479999999998888765 3
Q ss_pred HhhhccCCc-ccceEeeecchhhhhhhcCCcEeEEEEcCCCC---------------CCcHHHHHHHHHccCCCCeEEEE
Q 041517 222 VIYQNAIDS-VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHD---------------FNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 222 v~~~g~~~~-v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~---------------~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
+...|.... -..+.+..+|++........+||+|+.+--.. ...-...++.++++|+|||.+++
T Consensus 231 l~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~ 310 (541)
T 2ar0_A 231 CLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAV 310 (541)
T ss_dssp HHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEE
Confidence 332232210 00145667777654322246899999863211 11123568899999999996654
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.69 E-value=4.9e-05 Score=79.10 Aligned_cols=110 Identities=12% Similarity=0.014 Sum_probs=71.4
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCC---------CCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhc
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLG---------LDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQN 226 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~---------~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g 226 (327)
...||+||||+|-.....+++.+..+ ...+|++||-++......+ .....+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~--------------------~~~~Ng 469 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLK--------------------YMNVRT 469 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHH--------------------HHHHHT
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHH--------------------HHHhcC
Confidence 45899999999999755444432222 2459999999874332111 111245
Q ss_pred cCCcccceEeeecchhhh-hh---hcCCcEeEEEEcCC---CCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 227 AIDSVLPVPFSSGSALTK-LC---EWGVVGDLIEIDAG---HDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 227 ~~~~v~~V~~~~gda~~~-L~---~l~~~fDLIfIDa~---h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+.++ |.+++++..+. ++ ...++.|+|+..-. ..++-..+.|..+.+.|+|||+++=+-+
T Consensus 470 ~~d~---VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP~~~ 535 (745)
T 3ua3_A 470 WKRR---VTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIPQKY 535 (745)
T ss_dssp TTTC---SEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEESCEE
T ss_pred CCCe---EEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEECCcc
Confidence 6666 88899998885 21 11478999997633 2234344567777889999999874444
No 278
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.62 E-value=3e-05 Score=65.62 Aligned_cols=110 Identities=15% Similarity=0.087 Sum_probs=70.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
...+||+||||. +++|+++.|.+.+++... .. +
T Consensus 12 ~g~~vL~~~~g~--------------------v~vD~s~~ml~~a~~~~~------------------------~~---~ 44 (176)
T 2ld4_A 12 AGQFVAVVWDKS--------------------SPVEALKGLVDKLQALTG------------------------NE---G 44 (176)
T ss_dssp TTSEEEEEECTT--------------------SCHHHHHHHHHHHHHHTT------------------------TT---S
T ss_pred CCCEEEEecCCc--------------------eeeeCCHHHHHHHHHhcc------------------------cC---c
Confidence 357999999974 127887777776655211 11 5
Q ss_pred Eeeecchhhhhhh---cCCcEeEEEE-cCCCCC-CcHHHHHHHHHccCCCCeEEEEEcCCCCC----CchhHHHHHHHHH
Q 041517 235 PFSSGSALTKLCE---WGVVGDLIEI-DAGHDF-NSAWADINRAWRILRPGGVIFGHDYFTAA----DNRGVRRAVNLFA 305 (327)
Q Consensus 235 ~~~~gda~~~L~~---l~~~fDLIfI-Da~h~~-~~v~~dl~~~~~lL~pGGvIi~dD~~~~~----~~~GV~~Av~~f~ 305 (327)
.+..++..+. +. .+++||+|+. .+-|.. ......++++.+.|+|||++++.+..... .+.--...+...+
T Consensus 45 ~~~~~d~~~~-~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l 123 (176)
T 2ld4_A 45 RVSVENIKQL-LQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSAL 123 (176)
T ss_dssp EEEEEEGGGG-GGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHH
T ss_pred EEEEechhcC-ccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHH
Confidence 6667776553 33 3578999998 444544 45578899999999999999985432210 1111134455666
Q ss_pred HHcCCeEE
Q 041517 306 KINGLKVQ 313 (327)
Q Consensus 306 ~~~gl~v~ 313 (327)
...|+ +.
T Consensus 124 ~~aGf-i~ 130 (176)
T 2ld4_A 124 TLSGL-VE 130 (176)
T ss_dssp HHTTC-EE
T ss_pred HHCCC-cE
Confidence 77787 54
No 279
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.49 E-value=0.00026 Score=73.85 Aligned_cols=109 Identities=9% Similarity=-0.107 Sum_probs=75.5
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCC--------------------------------------CcEEEEEeCCCCCh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGL--------------------------------------DSQILCIDDFRGWP 196 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~--------------------------------------~~~V~~ID~~~~~~ 196 (327)
+...|||.+||+|...+..|.....+.| ..+|+++|+++.+.
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 3568999999999999998876433322 25899999999999
Q ss_pred hhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEeeecchhhhhhhc-CCcEeEEEEcCCC----CC----CcHH
Q 041517 197 GFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPFSSGSALTKLCEW-GVVGDLIEIDAGH----DF----NSAW 267 (327)
Q Consensus 197 ~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h----~~----~~v~ 267 (327)
+.|++ |+...|+.+. |.+..+|+.+..... .+.||+|+.+--. .. ....
T Consensus 270 ~~A~~-------------------N~~~agv~~~---i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly 327 (703)
T 3v97_A 270 QRART-------------------NARLAGIGEL---ITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALH 327 (703)
T ss_dssp HHHHH-------------------HHHHTTCGGG---EEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHH
T ss_pred HHHHH-------------------HHHHcCCCCc---eEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHH
Confidence 88876 6666676655 889999987742221 2379999998321 11 1123
Q ss_pred HHHHHHHccCCCCeEEEE
Q 041517 268 ADINRAWRILRPGGVIFG 285 (327)
Q Consensus 268 ~dl~~~~~lL~pGGvIi~ 285 (327)
..+...++.+.|||.+.+
T Consensus 328 ~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 328 SLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHhhCCCCeEEE
Confidence 345556666778986555
No 280
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.43 E-value=0.00022 Score=65.12 Aligned_cols=96 Identities=14% Similarity=0.089 Sum_probs=61.7
Q ss_pred HHHHHHhhc---CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHH
Q 041517 146 VFGNLIDKV---RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNV 222 (327)
Q Consensus 146 lL~~L~~~~---~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv 222 (327)
++..+++.. +..+|||||||+|..|..+++. + ..+|++||+++.+.+.+++. .
T Consensus 19 i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~----~-~~~v~avEid~~~~~~~~~~-~------------------ 74 (249)
T 3ftd_A 19 VLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH----P-LKKLYVIELDREMVENLKSI-G------------------ 74 (249)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS----C-CSEEEEECCCHHHHHHHTTS-C------------------
T ss_pred HHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc----C-CCeEEEEECCHHHHHHHHhc-c------------------
Confidence 444444443 4579999999999999999873 2 48999999999988776552 1
Q ss_pred hhhccCCcccceEeeecchhhh-hhhcCCcEeEEEEcCCCCCCcHHHHHHHHHcc
Q 041517 223 IYQNAIDSVLPVPFSSGSALTK-LCEWGVVGDLIEIDAGHDFNSAWADINRAWRI 276 (327)
Q Consensus 223 ~~~g~~~~v~~V~~~~gda~~~-L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~l 276 (327)
..+ +.+..+|+.+. ++....++ .|+ ++.+|+-....+..++..
T Consensus 75 -----~~~---v~~i~~D~~~~~~~~~~~~~-~vv--~NlPy~i~~~il~~ll~~ 118 (249)
T 3ftd_A 75 -----DER---LEVINEDASKFPFCSLGKEL-KVV--GNLPYNVASLIIENTVYN 118 (249)
T ss_dssp -----CTT---EEEECSCTTTCCGGGSCSSE-EEE--EECCTTTHHHHHHHHHHT
T ss_pred -----CCC---eEEEEcchhhCChhHccCCc-EEE--EECchhccHHHHHHHHhc
Confidence 112 77888887763 33322233 333 344555544555555553
No 281
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.40 E-value=0.00084 Score=69.42 Aligned_cols=149 Identities=15% Similarity=0.017 Sum_probs=91.1
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccC---CC-----CcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhh-
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQL---GL-----DSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQ- 225 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l---~~-----~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~- 225 (327)
++-+|+|+|.|+|++.+.+.++.+.. .| .-++++||.++-..+..++-...-. ....+.+++++.....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~--~~~~~~~~l~~~~~~~~ 135 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWP--ELASFAEQLRAQWPLPL 135 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCG--GGHHHHHHHHHTCCCCC
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCc--chhHHHHHHHHhCcccC
Confidence 34689999999999999988765321 11 2579999999865554333111000 0011222333322110
Q ss_pred -c-----cCCcccceEeeecchhhhhhhc----CCcEeEEEEcCCCCC--CcH--HHHHHHHHccCCCCeEEEEEcCCCC
Q 041517 226 -N-----AIDSVLPVPFSSGSALTKLCEW----GVVGDLIEIDAGHDF--NSA--WADINRAWRILRPGGVIFGHDYFTA 291 (327)
Q Consensus 226 -g-----~~~~v~~V~~~~gda~~~L~~l----~~~fDLIfIDa~h~~--~~v--~~dl~~~~~lL~pGGvIi~dD~~~~ 291 (327)
| +.+.-+.+.+..||+.+.|+.+ ...+|.+|+|+-.+. +.+ ...+..+.++++|||.+...-..
T Consensus 136 ~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~-- 213 (689)
T 3pvc_A 136 AGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA-- 213 (689)
T ss_dssp SEEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC--
T ss_pred CCceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc--
Confidence 1 1111123778899999999987 478999999986432 222 35678899999999998864332
Q ss_pred CCchhHHHHHHHHHHHcCCeEEE
Q 041517 292 ADNRGVRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 292 ~~~~GV~~Av~~f~~~~gl~v~~ 314 (327)
..|++++ ...|+.+..
T Consensus 214 ---~~vr~~l----~~aGf~~~~ 229 (689)
T 3pvc_A 214 ---GFVRRGL----QQAGFNVTK 229 (689)
T ss_dssp ---HHHHHHH----HHTTCEEEE
T ss_pred ---HHHHHHH----HhCCeEEEe
Confidence 2355544 456776654
No 282
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.38 E-value=9.7e-05 Score=67.67 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=33.2
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKF 202 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~ 202 (327)
+..+|||||||+|..|. +++ +...+|++||+++.+.+.+++.
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-----~~~~~v~avEid~~~~~~a~~~ 62 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-----ERLDQLTVIELDRDLAARLQTH 62 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-----TTCSCEEEECCCHHHHHHHHTC
T ss_pred CcCEEEEECCCCcHHHH-hhh-----CCCCeEEEEECCHHHHHHHHHH
Confidence 35689999999999999 654 1123499999999999887663
No 283
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.35 E-value=0.00018 Score=73.01 Aligned_cols=118 Identities=7% Similarity=-0.011 Sum_probs=74.3
Q ss_pred HHHHHHhhcC--CCEEEEEcCcchHHHHHHHHHhccCCC-----------CcEEEEEeCCCCChhhhhhhcccCccccch
Q 041517 146 VFGNLIDKVR--PRVIIEVGSFLGASALHMANLTRQLGL-----------DSQILCIDDFRGWPGFRDKFKEIPMVNGNV 212 (327)
Q Consensus 146 lL~~L~~~~~--p~~VLEIGt~~G~Sal~lA~a~r~l~~-----------~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~ 212 (327)
+...+++.+. +++|+|.+||+|...+.+++.++.... ...++++|+++.+..+|+.
T Consensus 233 Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~----------- 301 (544)
T 3khk_A 233 IVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM----------- 301 (544)
T ss_dssp HHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH-----------
T ss_pred HHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH-----------
Confidence 4444444443 358999999999998888765432211 4689999999988887765
Q ss_pred HHHHHHHHHHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCC------------------------------
Q 041517 213 LLYFQFLQNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHD------------------------------ 262 (327)
Q Consensus 213 ~~~~~Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~------------------------------ 262 (327)
|+...|.... +.+..+|++..-.....+||+|+.+--..
T Consensus 302 --------Nl~l~gi~~~---i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~ 370 (544)
T 3khk_A 302 --------NMVIRGIDFN---FGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPT 370 (544)
T ss_dssp --------HHHHTTCCCB---CCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCT
T ss_pred --------HHHHhCCCcc---cceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCC
Confidence 4444444322 33456665543112246899999752110
Q ss_pred CCcHHHHHHHHHccCCCCeEEEE
Q 041517 263 FNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 263 ~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
...-+..++.++++|+|||.+++
T Consensus 371 ~~~~~~Fl~~~l~~Lk~gGr~ai 393 (544)
T 3khk_A 371 GNANFAWMLHMLYHLAPTGSMAL 393 (544)
T ss_dssp TCTHHHHHHHHHHTEEEEEEEEE
T ss_pred cchhHHHHHHHHHHhccCceEEE
Confidence 01123568899999999997543
No 284
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.32 E-value=0.0002 Score=66.60 Aligned_cols=44 Identities=20% Similarity=0.195 Sum_probs=36.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCC-CcEEEEEeCCCCChhhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGL-DSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~-~~~V~~ID~~~~~~~~A~~ 201 (327)
...+|||||||+|..|..+++.. .. +++|++||+++.+.+.+++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~---~~~~~~V~avDid~~~l~~a~~ 86 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARL---ATPGSPLHAVELDRDLIGRLEQ 86 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHH---CBTTBCEEEEECCHHHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHhC---CCcCCeEEEEECCHHHHHHHHH
Confidence 46799999999999999999852 22 3569999999999887765
No 285
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.13 E-value=0.0014 Score=66.51 Aligned_cols=109 Identities=12% Similarity=0.022 Sum_probs=72.0
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
...+|+|.+||+|...+.+++.++. .....++|+|+++.+..+|+. |+...|... -.+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~-~~~~~i~G~Eid~~~~~lA~~-------------------Nl~l~gi~~--~~~ 278 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQ-PQTVVYFGQELNTSTYNLARM-------------------NMILHGVPI--ENQ 278 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSC-TTTCEEEEEESCHHHHHHHHH-------------------HHHHTTCCG--GGE
T ss_pred CCCEEeecccchhHHHHHHHHHHHh-ccCceEEEEECcHHHHHHHHH-------------------HHHHcCCCc--Ccc
Confidence 3469999999999999988886542 236799999999988887765 333333321 015
Q ss_pred Eeeecchhhh-hh-hcCCcEeEEEEcCC----C----------CC----------CcHHHHHHHHHccCC-CCeEEEE
Q 041517 235 PFSSGSALTK-LC-EWGVVGDLIEIDAG----H----------DF----------NSAWADINRAWRILR-PGGVIFG 285 (327)
Q Consensus 235 ~~~~gda~~~-L~-~l~~~fDLIfIDa~----h----------~~----------~~v~~dl~~~~~lL~-pGGvIi~ 285 (327)
.+..+|+... .+ ....+||+|+.+-- . .+ ..-+..++.++.+|+ +||++++
T Consensus 279 ~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~ 356 (542)
T 3lkd_A 279 FLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAI 356 (542)
T ss_dssp EEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEE
T ss_pred ceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEE
Confidence 6777877653 11 12468999996511 0 00 012346889999999 9997643
No 286
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=97.01 E-value=0.0054 Score=52.46 Aligned_cols=115 Identities=16% Similarity=0.144 Sum_probs=79.7
Q ss_pred hHHHHHHHHHhhcC--CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHH
Q 041517 142 SYGAVFGNLIDKVR--PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFL 219 (327)
Q Consensus 142 ~~g~lL~~L~~~~~--p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl 219 (327)
.|...|.+.+.... ++-|+|+|-|+|.+--+|.+. -++.+|+.+|-.-.... +
T Consensus 25 aQR~~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~----~P~R~I~vfDR~~~~hp------~--------------- 79 (174)
T 3iht_A 25 SQRACLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQH----VQGREIYVFERAVASHP------D--------------- 79 (174)
T ss_dssp HHHHHHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHH----CCSSCEEEEESSCCCCG------G---------------
T ss_pred HHHHHHHHHHHHhcCCCCceEEecCCCChhHHHHHHh----CCCCcEEEEEeeeccCC------C---------------
Confidence 45567777776654 689999999999999999985 45999999998543211 0
Q ss_pred HHHhhhccCCcccceEeeecchhhhhhh----cCCcEeEEEEcCCCCCCcHHHHHH-----HHHccCCCCeEEEEEcCCC
Q 041517 220 QNVIYQNAIDSVLPVPFSSGSALTKLCE----WGVVGDLIEIDAGHDFNSAWADIN-----RAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 220 ~nv~~~g~~~~v~~V~~~~gda~~~L~~----l~~~fDLIfIDa~h~~~~v~~dl~-----~~~~lL~pGGvIi~dD~~~ 290 (327)
-... . -.+..|+..++|+. ++.+.-|++.|-+-.+...-.... .+.++|.|||+++-.+-..
T Consensus 80 -~~P~-----~---e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl~ 150 (174)
T 3iht_A 80 -STPP-----E---AQLILGDIRETLPATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRMY 150 (174)
T ss_dssp -GCCC-----G---GGEEESCHHHHHHHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCCC
T ss_pred -CCCc-----h---HheecccHHHHHHHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCccC
Confidence 0000 0 23567888888765 478999999996544433212222 3357999999999887663
No 287
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=96.95 E-value=0.0085 Score=57.98 Aligned_cols=119 Identities=8% Similarity=-0.025 Sum_probs=75.2
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||+|+..|.-|..+++. +++|++||.-+-... +...+ . |.
T Consensus 212 G~~vlDLGAaPGGWT~~l~~r------g~~V~aVD~~~l~~~------------------------l~~~~---~---V~ 255 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLVKR------NMWVYSVDNGPMAQS------------------------LMDTG---Q---VT 255 (375)
T ss_dssp TCEEEEETCTTCHHHHHHHHT------TCEEEEECSSCCCHH------------------------HHTTT---C---EE
T ss_pred CCEEEEeCcCCCHHHHHHHHC------CCEEEEEEhhhcChh------------------------hccCC---C---eE
Confidence 568999999999999998873 789999998542111 11111 2 77
Q ss_pred eeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHH---HHHHHcCCe
Q 041517 236 FSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVN---LFAKINGLK 311 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~---~f~~~~gl~ 311 (327)
+..+|+.+..+. ..++|+|+.|..-....+..-+..|+.....++.|+.--......+..+++... ...+..|+.
T Consensus 256 ~~~~d~~~~~~~-~~~~D~vvsDm~~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 256 WLREDGFKFRPT-RSNISWMVCDMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGIN 333 (375)
T ss_dssp EECSCTTTCCCC-SSCEEEEEECCSSCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEeCccccccCC-CCCcCEEEEcCCCChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcc
Confidence 778887664332 368999999987644445555666666666667665433322233344544433 444555654
No 288
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.90 E-value=0.0019 Score=54.81 Aligned_cols=49 Identities=12% Similarity=-0.027 Sum_probs=38.1
Q ss_pred HHHHHHHHhhcC-CCEEEEEcCcch-HHHHHHHHHhccCCCCcEEEEEeCCCCChh
Q 041517 144 GAVFGNLIDKVR-PRVIIEVGSFLG-ASALHMANLTRQLGLDSQILCIDDFRGWPG 197 (327)
Q Consensus 144 g~lL~~L~~~~~-p~~VLEIGt~~G-~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~ 197 (327)
..+...+.+... +.+|||||||.| ..|..|++- .+-.|+++|+++...+
T Consensus 23 e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~-----~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 23 NDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKH-----SKVDLVLTDIKPSHGG 73 (153)
T ss_dssp HHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHH-----SCCEEEEECSSCSSTT
T ss_pred HHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHh-----CCCeEEEEECCccccc
Confidence 345556666555 679999999999 599999972 1678999999987664
No 289
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.85 E-value=0.011 Score=62.70 Aligned_cols=43 Identities=14% Similarity=-0.006 Sum_probs=35.1
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhh
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFR 199 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A 199 (327)
..+|+|.|||+|...+.+++.+... ...+++++|+++.+...|
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei-~~~~IyGvEIDp~Al~LA 364 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNV-MPRQIWANDIETLFLELL 364 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTC-CGGGEEEECSCGGGHHHH
T ss_pred CCEEEECCCCccHHHHHHHHHhccc-CCCeEEEEECCHHHHHHH
Confidence 5699999999999999988853211 246899999999988887
No 290
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.68 E-value=0.0067 Score=56.40 Aligned_cols=122 Identities=13% Similarity=0.030 Sum_probs=69.4
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||+||+.|..+-.+++. ..-..++++|+...+........ .. +. .+ +.
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~----~~~~~v~g~dVGvDl~~~pi~~~-----------------~~---g~--~i--i~ 126 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQ----KEVSGVKGFTLGRDGHEKPMNVQ-----------------SL---GW--NI--IT 126 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTS----TTEEEEEEECCCCTTCCCCCCCC-----------------BT---TG--GG--EE
T ss_pred CCEEEEecCCCCHHHHHHHHh----cCCCcceeEEEeccCcccccccC-----------------cC---CC--Ce--EE
Confidence 468999999999999987762 22457788888654321110000 00 00 00 22
Q ss_pred eeecchhhhhhhcCCcEeEEEEcCCCC----CCcH---HHHHHHHHccCCCC-eEEEEEcCCCCCCchhHHHHHHHHHHH
Q 041517 236 FSSGSALTKLCEWGVVGDLIEIDAGHD----FNSA---WADINRAWRILRPG-GVIFGHDYFTAADNRGVRRAVNLFAKI 307 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfIDa~h~----~~~v---~~dl~~~~~lL~pG-GvIi~dD~~~~~~~~GV~~Av~~f~~~ 307 (327)
+ .++. +.....+++||+|..|.... +.+. ..-++.+.+.|+|| |.+|+ .++. |--+++.+.+..+-..
T Consensus 127 ~-~~~~-dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~-KVf~-pyg~~~~~l~~~lk~~ 202 (277)
T 3evf_A 127 F-KDKT-DIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCV-KVLA-PYMPDVLEKLELLQRR 202 (277)
T ss_dssp E-ECSC-CTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE-EESC-TTSHHHHHHHHHHHHH
T ss_pred E-eccc-eehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEE-EecC-CCCccHHHHHHHHHHh
Confidence 2 2221 21122257899999997543 1111 11247778999999 99999 5554 2225566666666544
Q ss_pred cC
Q 041517 308 NG 309 (327)
Q Consensus 308 ~g 309 (327)
.+
T Consensus 203 F~ 204 (277)
T 3evf_A 203 FG 204 (277)
T ss_dssp HC
T ss_pred cC
Confidence 33
No 291
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.50 E-value=0.015 Score=59.72 Aligned_cols=146 Identities=15% Similarity=0.003 Sum_probs=86.9
Q ss_pred CEEEEEcCcchHHHHHHHHHhccC---C-----CCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhh--hc
Q 041517 157 RVIIEVGSFLGASALHMANLTRQL---G-----LDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIY--QN 226 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l---~-----~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~--~g 226 (327)
-+|+|+|-|+|++++...+..+.. . ..-.++++|.+|-..+..++....-.. ...+.+++++.... .|
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~--~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPE--LAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGG--GHHHHHHHHHHCCCCCSE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChh--hHHHHHHHHHhCcccCCC
Confidence 489999999999998877765321 1 124689999988555433321110000 01122233322211 01
Q ss_pred c-----CCcccceEeeecchhhhhhhc----CCcEeEEEEcCCCC--CCcH--HHHHHHHHccCCCCeEEEEEcCCCCCC
Q 041517 227 A-----IDSVLPVPFSSGSALTKLCEW----GVVGDLIEIDAGHD--FNSA--WADINRAWRILRPGGVIFGHDYFTAAD 293 (327)
Q Consensus 227 ~-----~~~v~~V~~~~gda~~~L~~l----~~~fDLIfIDa~h~--~~~v--~~dl~~~~~lL~pGGvIi~dD~~~~~~ 293 (327)
+ .+.-+.+.+..||+.+.|+.+ ...||.||.|+--+ ++.+ ...+..+.++++|||.+...-..
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~---- 221 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA---- 221 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC----
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc----
Confidence 1 110123667789999999987 36899999998532 2333 24578999999999998864332
Q ss_pred chhHHHHHHHHHHHcCCeEE
Q 041517 294 NRGVRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 294 ~~GV~~Av~~f~~~~gl~v~ 313 (327)
..|++++. ..|+.+.
T Consensus 222 -~~vr~~L~----~aGf~v~ 236 (676)
T 3ps9_A 222 -GFVRRGLQ----DAGFTMQ 236 (676)
T ss_dssp -HHHHHHHH----HHTCEEE
T ss_pred -HHHHHHHH----hCCeEEE
Confidence 23555554 4566554
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.42 E-value=0.0058 Score=57.05 Aligned_cols=50 Identities=8% Similarity=-0.068 Sum_probs=39.5
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~ 201 (327)
+++..|. ....+.+||++||.|.-|..|++. +++|++||.++.+.+.+++
T Consensus 13 e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~------~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 13 EALDLLA-VRPGGVYVDATLGGAGHARGILER------GGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp HHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHH
T ss_pred HHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC------CCEEEEEeCCHHHHHHHHh
Confidence 3444442 224579999999999999999983 7899999999988877655
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=95.63 E-value=0.053 Score=50.95 Aligned_cols=118 Identities=16% Similarity=0.104 Sum_probs=76.4
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChh---hhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPG---FRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~---~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..+|||+||+.|..+-..+.. .+ -.+|+++|+-..-.+ ..+++ | .|+
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~---~g-v~~V~avdvG~~~he~P~~~~ql-------~---------w~l---------- 144 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQ---KR-VQEVRGYTKGGPGHEEPQLVQSY-------G---------WNI---------- 144 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTC---TT-EEEEEEECCCSTTSCCCCCCCBT-------T---------GGG----------
T ss_pred CCEEEEeCCCCCcHHHHHHhh---cC-CCEEEEEEcCCCCccCcchhhhc-------C---------Ccc----------
Confidence 468999999999999887762 22 448999999765221 11110 0 011
Q ss_pred ceEeeec-chhhhhhhcCCcEeEEEEcCCCCCCc-------HHHHHHHHHccCCCC-eEEEEEcCCCCCCchhHHHHHHH
Q 041517 233 PVPFSSG-SALTKLCEWGVVGDLIEIDAGHDFNS-------AWADINRAWRILRPG-GVIFGHDYFTAADNRGVRRAVNL 303 (327)
Q Consensus 233 ~V~~~~g-da~~~L~~l~~~fDLIfIDa~h~~~~-------v~~dl~~~~~lL~pG-GvIi~dD~~~~~~~~GV~~Av~~ 303 (327)
|.+.++ |... ++. .++|+|.+|-.-.... .+..|+.+.+.|++| |-.|+ -++. |.-++|.++++.
T Consensus 145 -V~~~~~~Dv~~-l~~--~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~-KVl~-pY~~~v~e~l~~ 218 (321)
T 3lkz_A 145 -VTMKSGVDVFY-RPS--ECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCV-KVLC-PYMPKVIEKMEL 218 (321)
T ss_dssp -EEEECSCCTTS-SCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEE-EESC-TTSHHHHHHHHH
T ss_pred -eEEEeccCHhh-CCC--CCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEE-EEcC-CCChHHHHHHHH
Confidence 666666 4322 222 6799999997744322 233566667788888 76665 4544 555789899998
Q ss_pred HHHHcC
Q 041517 304 FAKING 309 (327)
Q Consensus 304 f~~~~g 309 (327)
+-...|
T Consensus 219 lq~~fg 224 (321)
T 3lkz_A 219 LQRRYG 224 (321)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 887765
No 294
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.52 E-value=0.012 Score=55.00 Aligned_cols=122 Identities=9% Similarity=-0.043 Sum_probs=73.4
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
+...+..+|++=+|+|..++.+.+ ...+++.||.++.....-++ |+.. .++
T Consensus 88 ~~~n~~~~LDlfaGSGaLgiEaLS------~~d~~vfvE~~~~a~~~L~~-------------------Nl~~---~~~- 138 (283)
T 2oo3_A 88 KQINLNSTLSYYPGSPYFAINQLR------SQDRLYLCELHPTEYNFLLK-------------------LPHF---NKK- 138 (283)
T ss_dssp HHHSSSSSCCEEECHHHHHHHHSC------TTSEEEEECCSHHHHHHHTT-------------------SCCT---TSC-
T ss_pred HHhcCCCceeEeCCcHHHHHHHcC------CCCeEEEEeCCHHHHHHHHH-------------------HhCc---CCc-
Confidence 335678899998888888777554 35899999998765544443 3322 123
Q ss_pred cceEeeecchhhhhhhc---CCcEeEEEEcCCCCC-CcHHHHHHHHHc--cCCCCeEEEEEcCCCCCCchhHHHHHHHHH
Q 041517 232 LPVPFSSGSALTKLCEW---GVVGDLIEIDAGHDF-NSAWADINRAWR--ILRPGGVIFGHDYFTAADNRGVRRAVNLFA 305 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l---~~~fDLIfIDa~h~~-~~v~~dl~~~~~--lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~ 305 (327)
+++...|+...|..+ +.+||+||||-.-.. ......++.+.. .+.|+|++++ |..=.+-..+.+..+.+.
T Consensus 139 --~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~--WYPi~~~~~~~~~~~~l~ 214 (283)
T 2oo3_A 139 --VYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV--WYPVVNKAWTEQFLRKMR 214 (283)
T ss_dssp --EEEECSCHHHHHHHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE--EEEESSHHHHHHHHHHHH
T ss_pred --EEEEeCcHHHHHHHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE--EEeccchHHHHHHHHHHH
Confidence 788888988877654 247999999975432 222223333322 4667787776 322111223555555554
Q ss_pred H
Q 041517 306 K 306 (327)
Q Consensus 306 ~ 306 (327)
+
T Consensus 215 ~ 215 (283)
T 2oo3_A 215 E 215 (283)
T ss_dssp H
T ss_pred h
Confidence 3
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.30 E-value=0.013 Score=54.30 Aligned_cols=51 Identities=10% Similarity=0.133 Sum_probs=41.4
Q ss_pred HHHHHHHhhc--CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhh
Q 041517 145 AVFGNLIDKV--RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 145 ~lL~~L~~~~--~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~ 201 (327)
.++..+++.. ....|||++||+|..++.+++. +.++++||+++.+.+.+++
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~------g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARW------GRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc------CCeEEEEeCCHHHHHHHHH
Confidence 4666666543 4579999999999999987774 6899999999999888876
No 296
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.21 E-value=0.047 Score=50.34 Aligned_cols=120 Identities=13% Similarity=0.029 Sum_probs=72.0
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCC-CcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGL-DSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~-~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
..+|||+||+-|.=+...++.. ..+. .+.++++|. +. ..+.... . ++ + -+
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~-~vg~V~G~vig~D~-~~-~P~~~~~------~-----------Gv---~------~i 124 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMK-NVQEVRGYTKGGPG-HE-EPMLMQS------Y-----------GW---N------IV 124 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTST-TEEEEEEECCCSTT-SC-CCCCCCS------T-----------TG---G------GE
T ss_pred CCEEEEcCCCCCHHHHHHhhhc-CCCCceeEEEcccc-cc-CCCcccC------C-----------Cc---e------EE
Confidence 4689999999999888877631 1222 456667663 11 1000000 0 11 0 15
Q ss_pred Eeeec-chhhhhhhcCCcEeEEEEcCCCCCCc-------HHHHHHHHHccCCCCe-EEEEEcCCCCCCchhHHHHHHHHH
Q 041517 235 PFSSG-SALTKLCEWGVVGDLIEIDAGHDFNS-------AWADINRAWRILRPGG-VIFGHDYFTAADNRGVRRAVNLFA 305 (327)
Q Consensus 235 ~~~~g-da~~~L~~l~~~fDLIfIDa~h~~~~-------v~~dl~~~~~lL~pGG-vIi~dD~~~~~~~~GV~~Av~~f~ 305 (327)
.|.+| |..+ +. +.++|+|..|....... ....++.+.+.|+||| -+++- ++. +..+++.+.++.+-
T Consensus 125 ~~~~G~Df~~-~~--~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK-VFq-g~~~~~~~~l~~lk 199 (269)
T 2px2_A 125 TMKSGVDVFY-KP--SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK-ILC-PYMPKVIEKLESLQ 199 (269)
T ss_dssp EEECSCCGGG-SC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE-ESC-TTSHHHHHHHHHHH
T ss_pred EeeccCCccC-CC--CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE-ECC-CCchHHHHHHHHHH
Confidence 55556 6554 11 45899999997643111 2235777889999999 77774 333 56678888777776
Q ss_pred HHcC
Q 041517 306 KING 309 (327)
Q Consensus 306 ~~~g 309 (327)
+..+
T Consensus 200 ~~F~ 203 (269)
T 2px2_A 200 RRFG 203 (269)
T ss_dssp HHHC
T ss_pred HHcC
Confidence 6544
No 297
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=95.18 E-value=0.17 Score=46.26 Aligned_cols=120 Identities=13% Similarity=-0.017 Sum_probs=77.7
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||+||+.|..+-..+.. .+ -.+|+++|+-..-.+.-+ .+...|. ..|.
T Consensus 79 g~~VvDLGaapGGWSq~~a~~---~g-~~~V~avdvG~~ghe~P~--------------------~~~s~gw----n~v~ 130 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGL---KK-VTEVRGYTKGGPGHEEPV--------------------PMSTYGW----NIVK 130 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTS---TT-EEEEEEECCCSTTSCCCC--------------------CCCCTTT----TSEE
T ss_pred CCEEEEcCCCCCcHHHHHHHh---cC-CCEEEEEecCCCCccCcc--------------------hhhhcCc----CceE
Confidence 468999999999999987763 23 458999999764322100 0011121 1288
Q ss_pred eeec-chhhhhhhcCCcEeEEEEcCCCCCCc-------HHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHH
Q 041517 236 FSSG-SALTKLCEWGVVGDLIEIDAGHDFNS-------AWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKI 307 (327)
Q Consensus 236 ~~~g-da~~~L~~l~~~fDLIfIDa~h~~~~-------v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~ 307 (327)
|.++ |... ++ ..++|.|..|-.-+... .+..|+.+.+.|++| -.++ -++. |..|.|.++++.+-..
T Consensus 131 fk~gvDv~~-~~--~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~~-~fc~-KVl~-py~p~v~e~l~~lq~~ 204 (267)
T 3p8z_A 131 LMSGKDVFY-LP--PEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKNN-QFCI-KVLN-PYMPTVIEHLERLQRK 204 (267)
T ss_dssp EECSCCGGG-CC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSSC-EEEE-EESC-CCSHHHHHHHHHHHHH
T ss_pred EEeccceee-cC--CccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhcccC-CEEE-EEcc-CCChhHHHHHHHHHHH
Confidence 8888 5422 22 36899999997654322 234567778889984 4444 4554 6667898999988877
Q ss_pred cC
Q 041517 308 NG 309 (327)
Q Consensus 308 ~g 309 (327)
.|
T Consensus 205 fg 206 (267)
T 3p8z_A 205 HG 206 (267)
T ss_dssp HC
T ss_pred hC
Confidence 65
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=95.14 E-value=0.023 Score=54.32 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=37.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRD 200 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~ 200 (327)
+.+.+||+.+|.|.-|..|++. ++++++|++||.++.+.+.++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~---lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQ---LGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT---CCTTCEEEEEESCHHHHHHHT
T ss_pred CCCEEEEeCcCCCHHHHHHHHh---CCCCCEEEEEECCHHHHHHHH
Confidence 3579999999999999999984 788999999999998887764
No 299
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=94.89 E-value=0.1 Score=48.57 Aligned_cols=122 Identities=13% Similarity=0.052 Sum_probs=70.6
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||+||+.|..+-..++. . .-..++++|+...+...+..... .| .++ +.
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~---~-gv~sV~GvdvG~d~~~~pi~~~~----~g---------~~i-----------i~ 142 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASL---K-NVKKVMAFTLGVQGHEKPIMRTT----LG---------WNL-----------IR 142 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTS---T-TEEEEEEECCCCTTSCCCCCCCB----TT---------GGG-----------EE
T ss_pred CCEEEEeCCCCCHHHHHHHHh---c-CCCeeeeEEeccCcccccccccc----CC---------Cce-----------EE
Confidence 458999999999999887752 2 25578899997664332211000 00 011 22
Q ss_pred eeecchhhhhhhcCCcEeEEEEcCCCCC-----Cc--HHHHHHHHHccCCCC--eEEEEEcCCCCCCchhHHHHHHHHHH
Q 041517 236 FSSGSALTKLCEWGVVGDLIEIDAGHDF-----NS--AWADINRAWRILRPG--GVIFGHDYFTAADNRGVRRAVNLFAK 306 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfIDa~h~~-----~~--v~~dl~~~~~lL~pG--GvIi~dD~~~~~~~~GV~~Av~~f~~ 306 (327)
+..+- +.....+.++|+|..|..... +. ...-++.+...|+|| |.+|+-=+. +--+++.+.++.+-.
T Consensus 143 ~~~~~--dv~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~--pyg~~~~~l~~~lk~ 218 (282)
T 3gcz_A 143 FKDKT--DVFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC--PYTPLIMEELSRLQL 218 (282)
T ss_dssp EECSC--CGGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC--CCSHHHHHHHHHHHH
T ss_pred eeCCc--chhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec--CCCccHHHHHHHHHH
Confidence 32221 111122478999999977541 11 112366778899999 998885444 112456666666554
Q ss_pred HcC
Q 041517 307 ING 309 (327)
Q Consensus 307 ~~g 309 (327)
..+
T Consensus 219 ~F~ 221 (282)
T 3gcz_A 219 KHG 221 (282)
T ss_dssp HHC
T ss_pred hcC
Confidence 433
No 300
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=93.88 E-value=0.39 Score=44.98 Aligned_cols=122 Identities=12% Similarity=-0.048 Sum_probs=69.7
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|||+||+.|..+-.+++. . .-..|+++|+...+........ ..+. ++ +.
T Consensus 82 g~~vlDLGaaPGgWsqva~~~---~-gv~sV~Gvdlg~~~~~~P~~~~----~~~~---------~i-----------v~ 133 (300)
T 3eld_A 82 TGRVLDLGCGRGGWSYYAAAQ---K-EVMSVKGYTLGIEGHEKPIHMQ----TLGW---------NI-----------VK 133 (300)
T ss_dssp CEEEEEETCTTCHHHHHHHTS---T-TEEEEEEECCCCTTSCCCCCCC----BTTG---------GG-----------EE
T ss_pred CCEEEEcCCCCCHHHHHHHHh---c-CCceeeeEEecccccccccccc----ccCC---------ce-----------EE
Confidence 568999999999999998873 1 2446889998654322110000 0000 11 22
Q ss_pred eeecchhhhhhhcCCcEeEEEEcCCCCC-Cc------HHHHHHHHHccCCCC-eEEEEEcCCCCCCchhHHHHHHHHHHH
Q 041517 236 FSSGSALTKLCEWGVVGDLIEIDAGHDF-NS------AWADINRAWRILRPG-GVIFGHDYFTAADNRGVRRAVNLFAKI 307 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfIDa~h~~-~~------v~~dl~~~~~lL~pG-GvIi~dD~~~~~~~~GV~~Av~~f~~~ 307 (327)
+..+- +.....+.++|+|..|..... .. ...-++.+...|+|| |.+|+-=+. +--+++.+.+..+-..
T Consensus 134 ~~~~~--di~~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~--~yG~~~~~ll~~lk~~ 209 (300)
T 3eld_A 134 FKDKS--NVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA--PYHPDVIEKLERLQLR 209 (300)
T ss_dssp EECSC--CTTTSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS--TTSHHHHHHHHHHHHH
T ss_pred eecCc--eeeecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc--ccCccHHHHHHHHHHh
Confidence 22221 111112478999999976541 10 012267778999999 999986333 2124566666666544
Q ss_pred cC
Q 041517 308 NG 309 (327)
Q Consensus 308 ~g 309 (327)
.+
T Consensus 210 F~ 211 (300)
T 3eld_A 210 FG 211 (300)
T ss_dssp HC
T ss_pred CC
Confidence 43
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=93.59 E-value=0.28 Score=46.20 Aligned_cols=90 Identities=17% Similarity=-0.080 Sum_probs=57.6
Q ss_pred CCEEEEEcC------cchHHHHHHHHHhccCCC-CcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccC
Q 041517 156 PRVIIEVGS------FLGASALHMANLTRQLGL-DSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAI 228 (327)
Q Consensus 156 p~~VLEIGt------~~G~Sal~lA~a~r~l~~-~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~ 228 (327)
..+||++|+ .-|. ..+.+ +.+ ++.|+++|+.+-... +
T Consensus 110 gmrVLDLGA~s~kg~APGS--~VLr~----~~p~g~~VVavDL~~~~sd-a----------------------------- 153 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGT--AVLRQ----WLPTGTLLVDSDLNDFVSD-A----------------------------- 153 (344)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHH----HSCTTCEEEEEESSCCBCS-S-----------------------------
T ss_pred CCEEEeCCCCCCCCCCCcH--HHHHH----hCCCCcEEEEeeCcccccC-C-----------------------------
Confidence 479999995 6666 23333 344 469999999764211 0
Q ss_pred CcccceEeeecchhhhhhhcCCcEeEEEEcCC-----C-------CCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 229 DSVLPVPFSSGSALTKLCEWGVVGDLIEIDAG-----H-------DFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 229 ~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~-----h-------~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
++ +.+||..+. ..+.+||+|+.|.. + ...-+...++.+...|+|||-+++-=.
T Consensus 154 ----~~-~IqGD~~~~--~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 154 ----DS-TLIGDCATV--HTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp ----SE-EEESCGGGE--EESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ----Ce-EEEcccccc--ccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 02 256664331 12578999999832 1 112245678889999999999988643
No 302
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=93.52 E-value=0.42 Score=46.27 Aligned_cols=21 Identities=10% Similarity=0.056 Sum_probs=18.3
Q ss_pred CCEEEEEcCcchHHHHHHHHH
Q 041517 156 PRVIIEVGSFLGASALHMANL 176 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a 176 (327)
+-+|+|+||++|..|+.+...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ 73 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD 73 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHH
Confidence 468999999999999987764
No 303
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.23 E-value=0.18 Score=48.14 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=59.5
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||-+|+|. |..++.+|++ ++ -.+|+++|.++...+.+++. |. + +
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~---~G-a~~Vi~~~~~~~~~~~a~~l-----------------------Ga-~-~-- 233 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARL---LG-AACVIVGDQNPERLKLLSDA-----------------------GF-E-T-- 233 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---HT-CSEEEEEESCHHHHHHHHTT-----------------------TC-E-E--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cC-CCEEEEEcCCHHHHHHHHHc-----------------------CC-c-E--
Confidence 457999999865 6677777775 33 23899999876554444331 21 1 1
Q ss_pred eEeeecch-hhhhhhc--CCcEeEEEEcCCCCCC---------cHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSSGSA-LTKLCEW--GVVGDLIEIDAGHDFN---------SAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~gda-~~~L~~l--~~~fDLIfIDa~h~~~---------~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.....+. .+.+..+ +..+|+||--...... +....++.+++.|++||.+++--
T Consensus 234 i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 234 IDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred EcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 22222222 2333332 2369998754443210 01146888999999999887543
No 304
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.19 E-value=0.17 Score=43.07 Aligned_cols=96 Identities=17% Similarity=0.184 Sum_probs=55.0
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
+.++||.+|. +.|..++.+++. . +.+|+++|.+++..+.+++ .|. +.+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~---~--G~~V~~~~~~~~~~~~~~~-----------------------~g~-~~~- 87 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKM---I--GARIYTTAGSDAKREMLSR-----------------------LGV-EYV- 87 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH---H--TCEEEEEESSHHHHHHHHT-----------------------TCC-SEE-
T ss_pred CCCEEEEeeCCChHHHHHHHHHHH---c--CCEEEEEeCCHHHHHHHHH-----------------------cCC-CEE-
Confidence 4578999994 445555555543 3 5789999986543332222 111 010
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.....+..+.+... +..+|+++.-+. . ..++.+++.|++||.++.--
T Consensus 88 -~d~~~~~~~~~~~~~~~~~~~D~vi~~~g----~--~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 88 -GDSRSVDFADEILELTDGYGVDVVLNSLA----G--EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp -EETTCSTHHHHHHHHTTTCCEEEEEECCC----T--HHHHHHHHTEEEEEEEEECS
T ss_pred -eeCCcHHHHHHHHHHhCCCCCeEEEECCc----h--HHHHHHHHHhccCCEEEEEc
Confidence 222222222323221 246999986543 1 46789999999999888643
No 305
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.02 E-value=0.13 Score=47.84 Aligned_cols=98 Identities=14% Similarity=0.070 Sum_probs=60.4
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
+..+||-+|+|. |..++.+|+. . +.+|+++|.++.-.+.+++. |. +.+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~---~--Ga~Vi~~~~~~~~~~~~~~l-----------------------Ga-~~~-- 214 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARA---M--GLRVAAVDIDDAKLNLARRL-----------------------GA-EVA-- 214 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHH---T--TCEEEEEESCHHHHHHHHHT-----------------------TC-SEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---C--CCeEEEEeCCHHHHHHHHHc-----------------------CC-CEE--
Confidence 457888899864 6777777774 3 56999999977655444432 11 110
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+.....+..+.+....+.+|+|+..... . ..++.+++.|++||.++.-..
T Consensus 215 i~~~~~~~~~~~~~~~g~~d~vid~~g~---~--~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 215 VNARDTDPAAWLQKEIGGAHGVLVTAVS---P--KAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EETTTSCHHHHHHHHHSSEEEEEESSCC---H--HHHHHHHHHEEEEEEEEECSC
T ss_pred EeCCCcCHHHHHHHhCCCCCEEEEeCCC---H--HHHHHHHHHhccCCEEEEeCC
Confidence 2222223233332222479999776542 2 578899999999999887543
No 306
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=92.82 E-value=0.92 Score=45.49 Aligned_cols=57 Identities=7% Similarity=-0.088 Sum_probs=39.5
Q ss_pred HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCC---------CcEEEEEeCCCCChhhhhh
Q 041517 145 AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGL---------DSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 145 ~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~---------~~~V~~ID~~~~~~~~A~~ 201 (327)
.+|..++......+|+|-.||+|.+.+...+.++.... ...++|+|.++.+..+++-
T Consensus 207 ~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~m 272 (530)
T 3ufb_A 207 RFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQM 272 (530)
T ss_dssp HHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHH
T ss_pred HHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHH
Confidence 34444443333468999999999998888776654322 3469999998887766653
No 307
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=92.63 E-value=0.28 Score=47.54 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=35.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKF 202 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~ 202 (327)
+...|+|||++.|..++.+++. ..++.++|++||+.+...+..+++
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~--~~~~~~~V~afEP~p~~~~~L~~n 271 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGV--TKGKFERVWMIEPDRINLQTLQNV 271 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHH--HTSCCSEEEEECCCHHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHH--hcCCCCEEEEEcCCHHHHHHHHHH
Confidence 4579999999999999998832 134458999999999876655443
No 308
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.46 E-value=0.22 Score=46.91 Aligned_cols=98 Identities=17% Similarity=0.129 Sum_probs=58.1
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||-+|+|. |..++.+|++ ++ -.+|+++|.+++-.+.+++. |. +.+
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~---~G-a~~Vi~~~~~~~~~~~a~~l-----------------------Ga-~~v-- 239 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKV---CG-ASIIIAVDIVESRLELAKQL-----------------------GA-THV-- 239 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHH---HT-CSEEEEEESCHHHHHHHHHH-----------------------TC-SEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cC-CCeEEEECCCHHHHHHHHHc-----------------------CC-CEE--
Confidence 357899999865 6667777764 32 23799999876544444332 11 111
Q ss_pred eEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.....+..+.+.++ ++.+|+||--... . ..++.+++.|++||.++.-.
T Consensus 240 i~~~~~~~~~~~~~~~~gg~D~vid~~g~---~--~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 240 INSKTQDPVAAIKEITDGGVNFALESTGS---P--EILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EETTTSCHHHHHHHHTTSCEEEEEECSCC---H--HHHHHHHHTEEEEEEEEECC
T ss_pred ecCCccCHHHHHHHhcCCCCcEEEECCCC---H--HHHHHHHHHHhcCCEEEEeC
Confidence 221122222333332 2379998754332 1 46789999999999888643
No 309
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=91.55 E-value=0.49 Score=45.55 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=26.8
Q ss_pred CCEEEEEcCcchHHHHHHHHHh--------ccC---CCCcEEEEEeCCCC
Q 041517 156 PRVIIEVGSFLGASALHMANLT--------RQL---GLDSQILCIDDFRG 194 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~--------r~l---~~~~~V~~ID~~~~ 194 (327)
+-+|+|+||++|..|+.+...+ +.. ++.-+|+.-|.-..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~N 102 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSN 102 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCcc
Confidence 4679999999999999974321 111 24667777777543
No 310
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.54 E-value=0.43 Score=44.39 Aligned_cols=97 Identities=18% Similarity=0.180 Sum_probs=57.9
Q ss_pred CCCEEEEEcCc--chHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGSF--LGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt~--~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
+..+||-+|++ .|..++.+|+. . +.+|+++|.++.-.+.+++.. .. .+
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~---~--Ga~Vi~~~~~~~~~~~~~~lg-----------------------a~-~~- 193 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQI---L--NFRLIAVTRNNKHTEELLRLG-----------------------AA-YV- 193 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH---H--TCEEEEEESSSTTHHHHHHHT-----------------------CS-EE-
T ss_pred CCCEEEEeCCccHHHHHHHHHHHH---c--CCEEEEEeCCHHHHHHHHhCC-----------------------Cc-EE-
Confidence 35789999986 56666666664 3 569999999887666554421 10 00
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+.....+..+.+.++ +..+|+|+--+.. ......++.|++||.++.--.
T Consensus 194 -~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 194 -IDTSTAPLYETVMELTNGIGADAAIDSIGG------PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp -EETTTSCHHHHHHHHTTTSCEEEEEESSCH------HHHHHHHHTEEEEEEEEECCC
T ss_pred -EeCCcccHHHHHHHHhCCCCCcEEEECCCC------hhHHHHHHHhcCCCEEEEEee
Confidence 222222223333332 3479988764442 223445689999999887544
No 311
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.48 E-value=1 Score=42.53 Aligned_cols=93 Identities=13% Similarity=0.102 Sum_probs=54.2
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
+..+||-+|+|. |..++.+|++ . +.+|+++|.++.-.+.+++. |. +.+
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~---~--Ga~Vi~~~~~~~~~~~a~~l-----------------------Ga-~~v-- 242 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHA---M--GAHVVAFTTSEAKREAAKAL-----------------------GA-DEV-- 242 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---T--TCEEEEEESSGGGHHHHHHH-----------------------TC-SEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---C--CCEEEEEeCCHHHHHHHHHc-----------------------CC-cEE--
Confidence 457899999853 5556666654 3 56799999877655544331 11 110
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+..... +.+......+|+||--.... ..++.+++.|++||.++.-
T Consensus 243 i~~~~~---~~~~~~~~g~Dvvid~~g~~-----~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 243 VNSRNA---DEMAAHLKSFDFILNTVAAP-----HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EETTCH---HHHHTTTTCEEEEEECCSSC-----CCHHHHHTTEEEEEEEEEC
T ss_pred eccccH---HHHHHhhcCCCEEEECCCCH-----HHHHHHHHHhccCCEEEEe
Confidence 111111 11222225699987544431 2357888999999988764
No 312
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=91.02 E-value=0.21 Score=45.09 Aligned_cols=51 Identities=10% Similarity=0.094 Sum_probs=40.8
Q ss_pred HHHHHHHhhc--CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhh
Q 041517 145 AVFGNLIDKV--RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 145 ~lL~~L~~~~--~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~ 201 (327)
.++..+++.. +...|||..||+|.+++...+. +.+++++|.++...+.+++
T Consensus 200 ~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~------gr~~ig~e~~~~~~~~~~~ 252 (260)
T 1g60_A 200 DLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKL------GRNFIGCDMNAEYVNQANF 252 (260)
T ss_dssp HHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc------CCeEEEEeCCHHHHHHHHH
Confidence 4666666543 4578999999999998887764 6899999999988877765
No 313
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=90.96 E-value=0.23 Score=44.86 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=37.7
Q ss_pred eEeeecchhhhhhhcC-CcEeEEEEcCCCCCC---------------cHHHHHHHHHccCCCCeEEEEE
Q 041517 234 VPFSSGSALTKLCEWG-VVGDLIEIDAGHDFN---------------SAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 234 V~~~~gda~~~L~~l~-~~fDLIfIDa~h~~~---------------~v~~dl~~~~~lL~pGGvIi~d 286 (327)
.++..||+.+.|..+. ++||+||+|---... -....++++.++|+|||+|++.
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3466889888887764 689999999542111 1234467778999999988765
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=90.89 E-value=0.78 Score=42.91 Aligned_cols=97 Identities=18% Similarity=0.126 Sum_probs=55.9
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCc-EEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDS-QILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~-~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|+|. |..++.+|++ + +. +|+++|.++.-.+.+++. |.+ .+
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~---~--Ga~~Vi~~~~~~~~~~~a~~l-----------------------Ga~-~v- 220 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKA---M--GAAQVVVTDLSATRLSKAKEI-----------------------GAD-LV- 220 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---T--TCSEEEEEESCHHHHHHHHHT-----------------------TCS-EE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---c--CCCEEEEECCCHHHHHHHHHh-----------------------CCC-EE-
Confidence 457899999854 5566666664 3 44 899999876544444332 111 11
Q ss_pred ceEee---ecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 233 PVPFS---SGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 233 ~V~~~---~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+... ..+..+.+... +..+|+||--... . ..++.+++.|++||.++.-.
T Consensus 221 -i~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~---~--~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 221 -LQISKESPQEIARKVEGQLGCKPEVTIECTGA---E--ASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp -EECSSCCHHHHHHHHHHHHTSCCSEEEECSCC---H--HHHHHHHHHSCTTCEEEECS
T ss_pred -EcCcccccchHHHHHHHHhCCCCCEEEECCCC---h--HHHHHHHHHhcCCCEEEEEe
Confidence 2211 01111222221 2468998754432 1 45788899999999888643
No 315
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.28 E-value=0.33 Score=45.41 Aligned_cols=98 Identities=17% Similarity=0.275 Sum_probs=56.4
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
+..+||-+|+|. |..++.+|++ .+ -.+|+++|..+.-.+.+++. |.+ .+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~---~G-a~~Vi~~~~~~~~~~~~~~l-----------------------Ga~-~v-- 215 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANH---LG-AGRIFAVGSRKHCCDIALEY-----------------------GAT-DI-- 215 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHT---TT-CSSEEEECCCHHHHHHHHHH-----------------------TCC-EE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cC-CcEEEEECCCHHHHHHHHHh-----------------------CCc-eE--
Confidence 457899999753 4555555553 33 23799999876544444432 111 11
Q ss_pred eEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.....+..+.+.++ +..+|+||--... + ..++.+++.|++||.++.-.
T Consensus 216 i~~~~~~~~~~v~~~t~g~g~D~v~d~~g~---~--~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 216 INYKNGDIVEQILKATDGKGVDKVVIAGGD---V--HTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp ECGGGSCHHHHHHHHTTTCCEEEEEECSSC---T--THHHHHHHHEEEEEEEEECC
T ss_pred EcCCCcCHHHHHHHHcCCCCCCEEEECCCC---h--HHHHHHHHHHhcCCEEEEec
Confidence 222223333333332 3469998743332 1 35788999999999888543
No 316
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.27 E-value=0.37 Score=45.06 Aligned_cols=79 Identities=11% Similarity=0.026 Sum_probs=49.7
Q ss_pred eEeeecchhhhhhhc-CCcEeEEEEcCCCC------CC---------cHHHHHHHHHccCCCCeEEEE-EcCCCCCC---
Q 041517 234 VPFSSGSALTKLCEW-GVVGDLIEIDAGHD------FN---------SAWADINRAWRILRPGGVIFG-HDYFTAAD--- 293 (327)
Q Consensus 234 V~~~~gda~~~L~~l-~~~fDLIfIDa~h~------~~---------~v~~dl~~~~~lL~pGGvIi~-dD~~~~~~--- 293 (327)
..+..||+.+.|..+ +++||+||+|---. |. .....++++.++|+|||.|++ .+..+...
T Consensus 15 ~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~ 94 (323)
T 1boo_A 15 GSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPA 94 (323)
T ss_dssp EEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEE
T ss_pred ceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcc
Confidence 677899999888766 47999999994321 11 234567888999999997765 33332110
Q ss_pred --chhHHHHHHHHHHHcCCeEE
Q 041517 294 --NRGVRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 294 --~~GV~~Av~~f~~~~gl~v~ 313 (327)
.... +.+.++++..|+.+.
T Consensus 95 ~~~~~~-~~i~~~~~~~Gf~~~ 115 (323)
T 1boo_A 95 RSIYNF-RVLIRMIDEVGFFLA 115 (323)
T ss_dssp ECCHHH-HHHHHHHHTTCCEEE
T ss_pred cccchH-HHHHHHHHhCCCEEE
Confidence 1112 233345667787654
No 317
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=90.06 E-value=0.29 Score=46.84 Aligned_cols=39 Identities=10% Similarity=0.014 Sum_probs=31.9
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhh
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFR 199 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A 199 (327)
..|||||.|.|..|..|++.. ...+|++||.++.+...-
T Consensus 60 ~~VlEIGPG~G~LT~~Ll~~~----~~~~vvavE~D~~l~~~L 98 (353)
T 1i4w_A 60 LKVLDLYPGVGIQSAIFYNKY----CPRQYSLLEKRSSLYKFL 98 (353)
T ss_dssp CEEEEESCTTCHHHHHHHHHH----CCSEEEEECCCHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHhhC----CCCEEEEEecCHHHHHHH
Confidence 689999999999999999842 146899999998765533
No 318
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=90.01 E-value=0.34 Score=45.49 Aligned_cols=53 Identities=23% Similarity=0.080 Sum_probs=38.7
Q ss_pred eEee-ecchhhhhhhcC-CcEeEEEEcCCCCCC------------cHHHHHHHHHccCCCCeEEEEE
Q 041517 234 VPFS-SGSALTKLCEWG-VVGDLIEIDAGHDFN------------SAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 234 V~~~-~gda~~~L~~l~-~~fDLIfIDa~h~~~------------~v~~dl~~~~~lL~pGGvIi~d 286 (327)
..+. .||+.+.|..+. ++||+||+|---... .....+.++.++|+|||+|++.
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 5667 899999887764 689999999542111 2345567889999999977754
No 319
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=89.82 E-value=0.24 Score=47.47 Aligned_cols=39 Identities=21% Similarity=0.142 Sum_probs=26.5
Q ss_pred CCEEEEEcCcchHHHHHHHHH----hcc--------CCCCcEEEEEeCCCC
Q 041517 156 PRVIIEVGSFLGASALHMANL----TRQ--------LGLDSQILCIDDFRG 194 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a----~r~--------l~~~~~V~~ID~~~~ 194 (327)
+-+|+|+||.+|.+|+.+... ++. -.+.-.|+.-|.-..
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~N 102 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGN 102 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCch
Confidence 357999999999999875543 110 134567777777554
No 320
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.45 E-value=1.4 Score=40.95 Aligned_cols=97 Identities=13% Similarity=0.133 Sum_probs=55.2
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
+..+||-+|+|. |..++.+|++ + +.+|+++|.+++..+.+++. |.+ .+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~---~--Ga~Vi~~~~~~~~~~~~~~l-----------------------Ga~-~~-- 216 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKA---Y--GAFVVCTARSPRRLEVAKNC-----------------------GAD-VT-- 216 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---T--TCEEEEEESCHHHHHHHHHT-----------------------TCS-EE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---c--CCEEEEEcCCHHHHHHHHHh-----------------------CCC-EE--
Confidence 457899999743 4555555553 3 45699999876544443321 211 11
Q ss_pred eEeee-cchhhhhhhc-----CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSS-GSALTKLCEW-----GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~-gda~~~L~~l-----~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.... .+..+.+.+. +..+|+||--... . ..++.+++.|++||.++.--
T Consensus 217 ~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g~---~--~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 217 LVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGN---E--KCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp EECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCC---H--HHHHHHHHHSCTTCEEEECS
T ss_pred EcCcccccHHHHHHHHhccccCCCCCEEEECCCC---H--HHHHHHHHHHhcCCEEEEEe
Confidence 22211 2222222221 3568998754432 1 45788899999999888643
No 321
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=89.42 E-value=1.5 Score=40.59 Aligned_cols=99 Identities=12% Similarity=0.034 Sum_probs=60.0
Q ss_pred CCCEEEEEcCcchH-HHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFLGA-SALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~G~-Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||=+|+|.+. .++.+|+. ++ +.+|+++|.+++-.+.+++. |.+ .+
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~---~~-g~~Vi~~~~~~~r~~~~~~~-----------------------Ga~-~~-- 212 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKN---VF-GAKVIAVDINQDKLNLAKKI-----------------------GAD-VT-- 212 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---TS-CCEEEEEESCHHHHHHHHHT-----------------------TCS-EE--
T ss_pred CCCEEEEEcCCCccHHHHHHHHH---hC-CCEEEEEECcHHHhhhhhhc-----------------------CCe-EE--
Confidence 35688989986543 33344442 33 68999999976544444332 111 11
Q ss_pred eEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 234 VPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 234 V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+.....+..+.+.++ +..+|.++.+... . ..++..+..|++||.++.--.
T Consensus 213 i~~~~~~~~~~v~~~t~g~g~d~~~~~~~~---~--~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 213 INSGDVNPVDEIKKITGGLGVQSAIVCAVA---R--IAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EEC-CCCHHHHHHHHTTSSCEEEEEECCSC---H--HHHHHHHHTEEEEEEEEECCC
T ss_pred EeCCCCCHHHHhhhhcCCCCceEEEEeccC---c--chhheeheeecCCceEEEEec
Confidence 333344444444443 3468888887654 2 568899999999998887544
No 322
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.40 E-value=0.61 Score=43.10 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=56.8
Q ss_pred cCCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhh-hhhcccCccccchHHHHHHHHHHhhhccCCc
Q 041517 154 VRPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFR-DKFKEIPMVNGNVLLYFQFLQNVIYQNAIDS 230 (327)
Q Consensus 154 ~~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A-~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~ 230 (327)
.+.++||-+|+ +.|..++.+|+. . +.+|+++|.+++-.+.+ ++. |. +.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~---~--Ga~Vi~~~~~~~~~~~~~~~~-----------------------g~-~~ 198 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARL---K--GCRVVGIAGGAEKCRFLVEEL-----------------------GF-DG 198 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH---T--TCEEEEEESSHHHHHHHHHTT-----------------------CC-SE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH---C--CCEEEEEeCCHHHHHHHHHHc-----------------------CC-CE
Confidence 34678999998 445556666653 3 56999999876544333 221 11 01
Q ss_pred ccceEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 231 VLPVPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+ +.....+..+.+.+. ++.+|+|+.-+.. ..++.+++.|++||.++.-
T Consensus 199 ~--~~~~~~~~~~~~~~~~~~~~d~vi~~~g~------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 199 A--IDYKNEDLAAGLKRECPKGIDVFFDNVGG------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp E--EETTTSCHHHHHHHHCTTCEEEEEESSCH------HHHHHHHTTEEEEEEEEEC
T ss_pred E--EECCCHHHHHHHHHhcCCCceEEEECCCc------chHHHHHHHHhhCCEEEEE
Confidence 0 222222222333222 3579988765442 4688999999999988863
No 323
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=89.39 E-value=1.6 Score=40.73 Aligned_cols=95 Identities=18% Similarity=0.046 Sum_probs=54.1
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||-+|+|. |..++.+|++ + +.+|+++|.++.-.+.+++. |. +.+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~---~--Ga~Vi~~~~~~~~~~~~~~l-----------------------Ga-~~v-- 227 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKA---M--GAETYVISRSSRKREDAMKM-----------------------GA-DHY-- 227 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---H--TCEEEEEESSSTTHHHHHHH-----------------------TC-SEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---C--CCEEEEEcCCHHHHHHHHHc-----------------------CC-CEE--
Confidence 457999999832 4455555553 3 46899999988766655432 11 110
Q ss_pred eEeeec-chhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 234 VPFSSG-SALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 234 V~~~~g-da~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+..... +..+.+ .+.+|+|+.-...... ..++.+++.|++||.++.-
T Consensus 228 ~~~~~~~~~~~~~---~~~~D~vid~~g~~~~---~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 228 IATLEEGDWGEKY---FDTFDLIVVCASSLTD---IDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEGGGTSCHHHHS---CSCEEEEEECCSCSTT---CCTTTGGGGEEEEEEEEEC
T ss_pred EcCcCchHHHHHh---hcCCCEEEECCCCCcH---HHHHHHHHHhcCCCEEEEe
Confidence 111111 212222 2469998754433001 2346778899999988753
No 324
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.25 E-value=0.69 Score=43.71 Aligned_cols=100 Identities=15% Similarity=0.191 Sum_probs=58.4
Q ss_pred cCCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 154 VRPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
....+||=+|+|. |..++.+|++ ++ -.+|+++|.+++-.+.+++. |.+ .+
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~---~G-a~~Vi~~~~~~~~~~~a~~l-----------------------Ga~-~v- 231 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARL---AG-ATTVILSTRQATKRRLAEEV-----------------------GAT-AT- 231 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH---TT-CSEEEEECSCHHHHHHHHHH-----------------------TCS-EE-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH---cC-CCEEEEECCCHHHHHHHHHc-----------------------CCC-EE-
Confidence 3457888899853 4555555654 33 23899999976655444432 111 10
Q ss_pred ceEeeecchhhhhhh---c-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 233 PVPFSSGSALTKLCE---W-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 233 ~V~~~~gda~~~L~~---l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+.....+..+.+.+ + ++.+|+||--... . ..++.+++.|++||.++.-..
T Consensus 232 -i~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~---~--~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 232 -VDPSAGDVVEAIAGPVGLVPGGVDVVIECAGV---A--ETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp -ECTTSSCHHHHHHSTTSSSTTCEEEEEECSCC---H--HHHHHHHHHEEEEEEEEECSC
T ss_pred -ECCCCcCHHHHHHhhhhccCCCCCEEEECCCC---H--HHHHHHHHHhccCCEEEEEec
Confidence 22222333333333 2 3479998753332 2 568899999999999887543
No 325
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=89.12 E-value=2.1 Score=39.77 Aligned_cols=89 Identities=10% Similarity=-0.013 Sum_probs=55.3
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
+..+||-+|+|. |..++.+|++ . +.+|+++|.++...+.+++. |. +.
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~---~--Ga~Vi~~~~~~~~~~~~~~l-----------------------Ga-~~--- 223 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVA---M--GAEVSVFARNEHKKQDALSM-----------------------GV-KH--- 223 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHH---T--TCEEEEECSSSTTHHHHHHT-----------------------TC-SE---
T ss_pred CCCEEEEECCcHHHHHHHHHHHH---C--CCeEEEEeCCHHHHHHHHhc-----------------------CC-Ce---
Confidence 457899899854 5555566654 4 46899999988766655442 21 11
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+ + .+ .+.+ ...+|+||--.... ..++.+++.|++||.++.-.
T Consensus 224 v-~--~~-~~~~---~~~~D~vid~~g~~-----~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 224 F-Y--TD-PKQC---KEELDFIISTIPTH-----YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp E-E--SS-GGGC---CSCEEEEEECCCSC-----CCHHHHHTTEEEEEEEEECC
T ss_pred e-c--CC-HHHH---hcCCCEEEECCCcH-----HHHHHHHHHHhcCCEEEEEC
Confidence 1 1 11 1222 22699987544332 24688899999999888753
No 326
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.65 E-value=1 Score=41.83 Aligned_cols=97 Identities=13% Similarity=0.108 Sum_probs=58.6
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
+..+||=+|+|. |..++.+|++ ++ +.+|+++|.+++-.+.+++. |.+ .+
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~---~g-~~~Vi~~~~~~~~~~~~~~l-----------------------Ga~-~~-- 220 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRA---VS-AARVIAVDLDDDRLALAREV-----------------------GAD-AA-- 220 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---HC-CCEEEEEESCHHHHHHHHHT-----------------------TCS-EE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cC-CCEEEEEcCCHHHHHHHHHc-----------------------CCC-EE--
Confidence 457899999854 5566666664 33 57999999987655544432 211 11
Q ss_pred eEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.. ..+..+.+.++ +..+|+||--... + ..++.+++.|++||.++.-.
T Consensus 221 i~~-~~~~~~~v~~~t~g~g~d~v~d~~G~---~--~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 221 VKS-GAGAADAIRELTGGQGATAVFDFVGA---Q--STIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEC-STTHHHHHHHHHGGGCEEEEEESSCC---H--HHHHHHHHHEEEEEEEEECS
T ss_pred EcC-CCcHHHHHHHHhCCCCCeEEEECCCC---H--HHHHHHHHHHhcCCEEEEEC
Confidence 211 11222323222 2479988754432 1 46889999999999888754
No 327
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.38 E-value=1.3 Score=41.82 Aligned_cols=99 Identities=16% Similarity=-0.000 Sum_probs=58.4
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||=+|+|. |..++.+|++ ++ -.+|+++|.+++-.+.+++.. .+ .+
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~---~G-a~~Vi~~~~~~~~~~~a~~lG-----------------------a~-~v-- 242 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKT---AG-ASRIIGIDIDSKKYETAKKFG-----------------------VN-EF-- 242 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH---HT-CSCEEEECSCTTHHHHHHTTT-----------------------CC-EE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cC-CCeEEEEcCCHHHHHHHHHcC-----------------------Cc-EE--
Confidence 356888899842 5555666654 33 238999999887666665432 10 00
Q ss_pred eEee--ecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCC-eEEEEEcC
Q 041517 234 VPFS--SGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPG-GVIFGHDY 288 (327)
Q Consensus 234 V~~~--~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pG-GvIi~dD~ 288 (327)
+... ..+..+.+.++ ++.+|+||--... + ..++.+++.|++| |.++.--.
T Consensus 243 i~~~~~~~~~~~~i~~~~~gg~D~vid~~g~---~--~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 243 VNPKDHDKPIQEVIVDLTDGGVDYSFECIGN---V--SVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp ECGGGCSSCHHHHHHHHTTSCBSEEEECSCC---H--HHHHHHHHTBCTTTCEEEECSC
T ss_pred EccccCchhHHHHHHHhcCCCCCEEEECCCC---H--HHHHHHHHHhhccCCEEEEEcc
Confidence 1111 11222333332 3479998754332 2 4678999999996 98887543
No 328
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=88.22 E-value=0.61 Score=43.02 Aligned_cols=97 Identities=12% Similarity=0.141 Sum_probs=57.0
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
+..+||=+|. +.|..++.+|+. . +.+|+++|.+++-.+.+++. |. +.+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~---~--Ga~Vi~~~~~~~~~~~~~~~-----------------------Ga-~~~- 189 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKA---L--GAKLIGTVSSPEKAAHAKAL-----------------------GA-WET- 189 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH---H--TCEEEEEESSHHHHHHHHHH-----------------------TC-SEE-
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH---C--CCEEEEEeCCHHHHHHHHHc-----------------------CC-CEE-
Confidence 3578999883 456666666664 3 56899999866544333321 11 110
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+.....+..+.+.+. +..+|+|+--... ..++.+++.|++||.++.--.
T Consensus 190 -~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 190 -IDYSHEDVAKRVLELTDGKKCPVVYDGVGQ------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp -EETTTSCHHHHHHHHTTTCCEEEEEESSCG------GGHHHHHTTEEEEEEEEECCC
T ss_pred -EeCCCccHHHHHHHHhCCCCceEEEECCCh------HHHHHHHHHhcCCCEEEEEec
Confidence 222222333333332 3579988765442 356888999999998887543
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=88.18 E-value=2.1 Score=40.16 Aligned_cols=98 Identities=17% Similarity=0.045 Sum_probs=56.1
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||-+|+|. |..++.+|++ ++ -.+|+++|.++.-.+.+++.. . +.+
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~---~G-a~~Vi~~~~~~~~~~~a~~lG-----------------------a-~~v-- 240 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKA---AG-ASRIIGVGTHKDKFPKAIELG-----------------------A-TEC-- 240 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---HT-CSEEEEECSCGGGHHHHHHTT-----------------------C-SEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cC-CCeEEEECCCHHHHHHHHHcC-----------------------C-cEE--
Confidence 357899999743 5555566654 33 238999998876655554421 1 110
Q ss_pred eEeee--cchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCC-eEEEEEc
Q 041517 234 VPFSS--GSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPG-GVIFGHD 287 (327)
Q Consensus 234 V~~~~--gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pG-GvIi~dD 287 (327)
+.... .+..+.+.+. ++.+|+||--... . ..++.+++.|++| |.++.--
T Consensus 241 i~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~---~--~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 241 LNPKDYDKPIYEVICEKTNGGVDYAVECAGR---I--ETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp ECGGGCSSCHHHHHHHHTTSCBSEEEECSCC---H--HHHHHHHHTBCTTTCEEEECC
T ss_pred EecccccchHHHHHHHHhCCCCCEEEECCCC---H--HHHHHHHHHHhcCCCEEEEEc
Confidence 11111 1122223222 2378988743332 1 4678999999999 9887643
No 330
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=88.08 E-value=0.84 Score=42.08 Aligned_cols=95 Identities=12% Similarity=0.038 Sum_probs=54.6
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..++||-+|+ +.|..++.+++. . +.+|+++|.+++..+.+++. |. +.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~---~--G~~V~~~~~~~~~~~~~~~~-----------------------g~-~~~- 194 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKL---K--GCKVVGAAGSDEKIAYLKQI-----------------------GF-DAA- 194 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHH---T--TCEEEEEESSHHHHHHHHHT-----------------------TC-SEE-
T ss_pred CCCEEEEecCCCcHHHHHHHHHHH---C--CCEEEEEeCCHHHHHHHHhc-----------------------CC-cEE-
Confidence 4578999997 444445555543 3 56999999865433332211 11 010
Q ss_pred ceEeee-cchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSS-GSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~-gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.... .+..+.+... ++.+|+++.-+.. ..++.+++.|++||.+++-
T Consensus 195 -~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 195 -FNYKTVNSLEEALKKASPDGYDCYFDNVGG------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp -EETTSCSCHHHHHHHHCTTCEEEEEESSCH------HHHHHHHTTEEEEEEEEEC
T ss_pred -EecCCHHHHHHHHHHHhCCCCeEEEECCCh------HHHHHHHHHHhcCCEEEEE
Confidence 22111 2222223222 2479998876552 3578899999999988764
No 331
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.06 E-value=2.1 Score=40.13 Aligned_cols=97 Identities=15% Similarity=0.002 Sum_probs=55.6
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCc-EEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDS-QILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~-~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|+|. |..++.+|++ + +. +|+++|.++.-.+.+++.. . +.+
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~---~--Ga~~Vi~~~~~~~~~~~~~~lG-----------------------a-~~v- 241 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHS---A--GAKRIIAVDLNPDKFEKAKVFG-----------------------A-TDF- 241 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---T--TCSEEEEECSCGGGHHHHHHTT-----------------------C-CEE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---c--CCCEEEEEcCCHHHHHHHHHhC-----------------------C-ceE-
Confidence 357899999743 4455555554 3 44 8999998877665554421 1 010
Q ss_pred ceEeee--cchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCC-eEEEEEc
Q 041517 233 PVPFSS--GSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPG-GVIFGHD 287 (327)
Q Consensus 233 ~V~~~~--gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pG-GvIi~dD 287 (327)
+.... .+..+.+.+. ++.+|+||--... . ..++.+++.|++| |.++.-.
T Consensus 242 -i~~~~~~~~~~~~~~~~~~~g~D~vid~~g~---~--~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 242 -VNPNDHSEPISQVLSKMTNGGVDFSLECVGN---V--GVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp -ECGGGCSSCHHHHHHHHHTSCBSEEEECSCC---H--HHHHHHHHTBCTTTCEEEECS
T ss_pred -EeccccchhHHHHHHHHhCCCCCEEEECCCC---H--HHHHHHHHHhhcCCcEEEEEc
Confidence 11111 1122222222 2478988743332 1 4678999999999 9887643
No 332
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=87.93 E-value=2.1 Score=40.22 Aligned_cols=97 Identities=18% Similarity=0.011 Sum_probs=55.1
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||-+|+|. |..++.+|++ ++ -.+|+++|.+++-.+.+++. |. +.+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~---~G-a~~Vi~~~~~~~~~~~a~~l-----------------------Ga-~~v-- 244 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKI---AG-ASRIIAIDINGEKFPKAKAL-----------------------GA-TDC-- 244 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---TT-CSEEEEECSCGGGHHHHHHT-----------------------TC-SEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cC-CCeEEEEcCCHHHHHHHHHh-----------------------CC-cEE--
Confidence 357899999742 4455555553 43 23899999987665555432 11 010
Q ss_pred eEeee--cchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCC-eEEEEE
Q 041517 234 VPFSS--GSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPG-GVIFGH 286 (327)
Q Consensus 234 V~~~~--gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pG-GvIi~d 286 (327)
+.... .+..+.+.+. ++.+|+||--... . ..++.+++.|++| |.++.-
T Consensus 245 i~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~---~--~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 245 LNPRELDKPVQDVITELTAGGVDYSLDCAGT---A--QTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp ECGGGCSSCHHHHHHHHHTSCBSEEEESSCC---H--HHHHHHHHTBCTTTCEEEEC
T ss_pred EccccccchHHHHHHHHhCCCccEEEECCCC---H--HHHHHHHHHhhcCCCEEEEE
Confidence 11111 1122222222 2378988643332 1 4678999999999 988764
No 333
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=87.87 E-value=1.6 Score=41.44 Aligned_cols=102 Identities=15% Similarity=0.038 Sum_probs=57.9
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||-+|+|. |..++.+|++ ++ -.+|+++|.+++-.+.+++. |.. .
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~---~G-a~~Vi~~~~~~~~~~~a~~l-----------------------Ga~-~--- 233 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARL---LG-AAVVIVGDLNPARLAHAKAQ-----------------------GFE-I--- 233 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---TT-CSEEEEEESCHHHHHHHHHT-----------------------TCE-E---
T ss_pred CCCEEEEECCcHHHHHHHHHHHH---CC-CCeEEEEcCCHHHHHHHHHc-----------------------CCc-E---
Confidence 457899999754 5566666664 33 23799999976555444332 210 0
Q ss_pred eEeeecc-hhhhhhhc--CCcEeEEEEcCCCCC----------CcHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSSGS-ALTKLCEW--GVVGDLIEIDAGHDF----------NSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~gd-a~~~L~~l--~~~fDLIfIDa~h~~----------~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.....+ ..+.+.++ +..+|+||--..... ......++.+++.|++||.+++--
T Consensus 234 i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 234 ADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred EccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 2222222 12233332 246999875433321 001146889999999999888643
No 334
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=87.77 E-value=0.55 Score=44.17 Aligned_cols=97 Identities=14% Similarity=0.072 Sum_probs=55.5
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||=+|+|. |..++.+|++ . +.+|+++|.++.-.+.+++. |. +.+
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~---~--Ga~Vi~~~~~~~~~~~~~~l-----------------------Ga-~~v-- 237 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKA---T--GAEVIVTSSSREKLDRAFAL-----------------------GA-DHG-- 237 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHH---T--TCEEEEEESCHHHHHHHHHH-----------------------TC-SEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---c--CCEEEEEecCchhHHHHHHc-----------------------CC-CEE--
Confidence 357899999653 4555555553 4 56999999876544433321 21 111
Q ss_pred eEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 234 VPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 234 V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+.....+..+.+.+. +..+|+|+--... ..++.+++.|++||.++.-..
T Consensus 238 i~~~~~~~~~~v~~~~~g~g~D~vid~~g~------~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 238 INRLEEDWVERVYALTGDRGADHILEIAGG------AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp EETTTSCHHHHHHHHHTTCCEEEEEEETTS------SCHHHHHHHEEEEEEEEEECC
T ss_pred EcCCcccHHHHHHHHhCCCCceEEEECCCh------HHHHHHHHHhhcCCEEEEEec
Confidence 221112222333222 3479988755442 246788899999998886543
No 335
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=87.66 E-value=1.9 Score=39.77 Aligned_cols=101 Identities=21% Similarity=0.136 Sum_probs=57.3
Q ss_pred cCCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 154 VRPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 154 ~~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
.+..+||=+|+|. |..++.+|++ ++ ...++++|.++.-.+.+++.. .+..
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~---~G-~~~vi~~~~~~~k~~~a~~lG-----------------------a~~~-- 209 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVA---LG-AKSVTAIDISSEKLALAKSFG-----------------------AMQT-- 209 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHH---TT-CSEEEEEESCHHHHHHHHHTT-----------------------CSEE--
T ss_pred CCCCEEEEECCCCcchHHHHHHHH---cC-CcEEEEEechHHHHHHHHHcC-----------------------CeEE--
Confidence 3467899999853 3334444543 44 457889999876555555432 1100
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+.....+..+....+ +..+|+|+-.... + ..++.+++.|++||.+++--..
T Consensus 210 -i~~~~~~~~~~~~~~~~~~g~d~v~d~~G~---~--~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 210 -FNSSEMSAPQMQSVLRELRFNQLILETAGV---P--QTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp -EETTTSCHHHHHHHHGGGCSSEEEEECSCS---H--HHHHHHHHHCCTTCEEEECCCC
T ss_pred -EeCCCCCHHHHHHhhcccCCcccccccccc---c--chhhhhhheecCCeEEEEEecc
Confidence 222222222322222 2457776654432 2 5678899999999988875543
No 336
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=87.59 E-value=1.9 Score=39.07 Aligned_cols=90 Identities=13% Similarity=0.195 Sum_probs=54.5
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|+ +.|..++.+|+. . +.+|+++|.+++..+.+++. |. +.+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~---~--Ga~Vi~~~~~~~~~~~~~~~-----------------------ga-~~~- 174 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARA---M--GLRVLAAASRPEKLALPLAL-----------------------GA-EEA- 174 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH---T--TCEEEEEESSGGGSHHHHHT-----------------------TC-SEE-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH---C--CCEEEEEeCCHHHHHHHHhc-----------------------CC-CEE-
Confidence 4578999997 446666666664 3 56999999876654444321 11 110
Q ss_pred ceEeee-cchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSS-GSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~-gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.... .+..+ .. ..+|+|+- ... ..++.+++.|++||.++.-
T Consensus 175 -~~~~~~~~~~~---~~-~~~d~vid-~g~------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 175 -ATYAEVPERAK---AW-GGLDLVLE-VRG------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -EEGGGHHHHHH---HT-TSEEEEEE-CSC------TTHHHHHTTEEEEEEEEEC
T ss_pred -EECCcchhHHH---Hh-cCceEEEE-CCH------HHHHHHHHhhccCCEEEEE
Confidence 11111 11112 22 46999987 654 2468889999999988753
No 337
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=87.51 E-value=0.5 Score=43.70 Aligned_cols=95 Identities=11% Similarity=0.148 Sum_probs=55.7
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
+..+||-+|+ +.|..++.+|+. . +.+|+++|.++.-.+.+++. |. +.+
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~---~--Ga~Vi~~~~~~~~~~~~~~~-----------------------ga-~~~- 197 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKM---K--GAHTIAVASTDEKLKIAKEY-----------------------GA-EYL- 197 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH---T--TCEEEEEESSHHHHHHHHHT-----------------------TC-SEE-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH---C--CCEEEEEeCCHHHHHHHHHc-----------------------CC-cEE-
Confidence 4578999994 445555555553 3 56899999865544333321 11 110
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.....+..+.+.+. +..+|+|+.-... ..++.+++.|++||.++.-
T Consensus 198 -~~~~~~~~~~~~~~~~~~~g~D~vid~~g~------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 198 -INASKEDILRQVLKFTNGKGVDASFDSVGK------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp -EETTTSCHHHHHHHHTTTSCEEEEEECCGG------GGHHHHHHHEEEEEEEEEC
T ss_pred -EeCCCchHHHHHHHHhCCCCceEEEECCCh------HHHHHHHHHhccCCEEEEE
Confidence 222222333333332 3579998765442 3578888999999988874
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=87.22 E-value=2.5 Score=39.49 Aligned_cols=98 Identities=17% Similarity=0.055 Sum_probs=55.4
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||-+|+|. |..++.+|++ ++ -.+|+++|.++.-.+.+++. |. +.+
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~---~G-a~~Vi~~~~~~~~~~~~~~l-----------------------Ga-~~v-- 239 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKV---AG-ASRIIGVDINKDKFARAKEF-----------------------GA-TEC-- 239 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---HT-CSEEEEECSCGGGHHHHHHH-----------------------TC-SEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cC-CCeEEEEcCCHHHHHHHHHc-----------------------CC-ceE--
Confidence 357899999743 4445555554 33 23899999887665555432 11 110
Q ss_pred eEeee--cchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCC-eEEEEEc
Q 041517 234 VPFSS--GSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPG-GVIFGHD 287 (327)
Q Consensus 234 V~~~~--gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pG-GvIi~dD 287 (327)
+.... .+..+.+.+. ++.+|+||--... . ..++.+++.|++| |.++.--
T Consensus 240 i~~~~~~~~~~~~v~~~~~~g~D~vid~~g~---~--~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 240 INPQDFSKPIQEVLIEMTDGGVDYSFECIGN---V--KVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp ECGGGCSSCHHHHHHHHTTSCBSEEEECSCC---H--HHHHHHHHTBCTTTCEEEECS
T ss_pred eccccccccHHHHHHHHhCCCCCEEEECCCc---H--HHHHHHHHhhccCCcEEEEEe
Confidence 11111 1122223222 2478988643332 1 4678999999999 9887643
No 339
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=87.04 E-value=2.4 Score=39.77 Aligned_cols=97 Identities=14% Similarity=-0.024 Sum_probs=55.4
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCc-EEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDS-QILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~-~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|+|. |..++.+|++ + +. +|+++|.+++-.+.+++.. . +.+
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~---~--Ga~~Vi~~~~~~~~~~~~~~lG-----------------------a-~~v- 240 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKA---A--GAARIIGVDINKDKFAKAKEVG-----------------------A-TEC- 240 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---T--TCSEEEEECSCGGGHHHHHHTT-----------------------C-SEE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---c--CCCeEEEEcCCHHHHHHHHHhC-----------------------C-ceE-
Confidence 357899999743 4455555553 3 44 8999998876665554321 1 010
Q ss_pred ceEeee--cchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCC-eEEEEEc
Q 041517 233 PVPFSS--GSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPG-GVIFGHD 287 (327)
Q Consensus 233 ~V~~~~--gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pG-GvIi~dD 287 (327)
+.... .+..+.+.+. ++.+|+||--... . ..++.+++.|++| |.++.--
T Consensus 241 -i~~~~~~~~~~~~~~~~~~~g~D~vid~~g~---~--~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 241 -VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGR---L--DTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp -ECGGGCSSCHHHHHHHHTTSCBSEEEECSCC---H--HHHHHHHHHBCTTTCEEEECS
T ss_pred -ecccccchhHHHHHHHHhCCCCcEEEECCCC---H--HHHHHHHHHhhcCCcEEEEec
Confidence 11111 1122223222 2478988643332 1 4678899999999 9887643
No 340
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=86.87 E-value=1.2 Score=41.34 Aligned_cols=94 Identities=18% Similarity=0.269 Sum_probs=56.6
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|+ +.|..++.+|+. . +.+|++++.+++-.+.+++. |. +.+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~---~--Ga~Vi~~~~~~~~~~~~~~~-----------------------ga-~~v- 208 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKG---M--GAKVIAVVNRTAATEFVKSV-----------------------GA-DIV- 208 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH---T--TCEEEEEESSGGGHHHHHHH-----------------------TC-SEE-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH---c--CCEEEEEeCCHHHHHHHHhc-----------------------CC-cEE-
Confidence 3578999996 456666666664 3 56999999877655444331 11 111
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+... .+..+.+.+. +..+|+||--... ..++.+++.|++||.++.-
T Consensus 209 -~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 209 -LPLE-EGWAKAVREATGGAGVDMVVDPIGG------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp -EESS-TTHHHHHHHHTTTSCEEEEEESCC--------CHHHHHHTEEEEEEEEEC
T ss_pred -ecCc-hhHHHHHHHHhCCCCceEEEECCch------hHHHHHHHhhcCCCEEEEE
Confidence 2221 2223333332 2479998765553 2467889999999988864
No 341
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=86.75 E-value=0.87 Score=42.32 Aligned_cols=98 Identities=18% Similarity=0.161 Sum_probs=55.4
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||-+|+|. |..++.+|++ +.++.+|+++|.++.-.+.+++. |. +.+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~---~~~Ga~Vi~~~~~~~~~~~~~~l-----------------------Ga-~~v-- 220 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKA---LMKNITIVGISRSKKHRDFALEL-----------------------GA-DYV-- 220 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHH---HCTTCEEEEECSCHHHHHHHHHH-----------------------TC-SEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---hcCCCEEEEEeCCHHHHHHHHHh-----------------------CC-CEE--
Confidence 568999999842 4445555553 42256899999876544444331 11 111
Q ss_pred eEeee-cchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSS-GSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~-gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.... .+..+.+.. +..+|+||--... . ..++.+++.|++||.++.--
T Consensus 221 i~~~~~~~~~~~~~~-g~g~D~vid~~g~---~--~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 221 SEMKDAESLINKLTD-GLGASIAIDLVGT---E--ETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp ECHHHHHHHHHHHHT-TCCEEEEEESSCC---H--HHHHHHHHHEEEEEEEEECC
T ss_pred eccccchHHHHHhhc-CCCccEEEECCCC---h--HHHHHHHHHhhcCCEEEEeC
Confidence 11111 111111221 3479998754432 1 46788999999999888643
No 342
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=86.45 E-value=2.6 Score=39.32 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=56.1
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCcE-EEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDSQ-ILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~-V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
+..+||=+|+|. |..++.+|++ + +.+ |+++|.+++-.+.+++..+ .+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~---~--Ga~~Vi~~~~~~~~~~~a~~l~~-------------------------~~- 227 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKA---A--GACPLVITDIDEGRLKFAKEICP-------------------------EV- 227 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH---T--TCCSEEEEESCHHHHHHHHHHCT-------------------------TC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---c--CCCEEEEECCCHHHHHHHHHhch-------------------------hc-
Confidence 457888899844 5555556654 3 444 9999997765554443210 10
Q ss_pred ceEee-----ecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 233 PVPFS-----SGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 233 ~V~~~-----~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+... ..+..+.+.++ +..+|+||--... + ..++.+++.|++||.++.--.
T Consensus 228 -~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~---~--~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 228 -VTHKVERLSAEESAKKIVESFGGIEPAVALECTGV---E--SSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp -EEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCC---H--HHHHHHHHHSCTTCEEEECCC
T ss_pred -ccccccccchHHHHHHHHHHhCCCCCCEEEECCCC---h--HHHHHHHHHhcCCCEEEEEcc
Confidence 1111 11222222222 3579998754432 1 467889999999999887543
No 343
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=86.43 E-value=1.5 Score=41.10 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=57.0
Q ss_pred cCCCEEEEEc--CcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 154 VRPRVIIEVG--SFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 154 ~~p~~VLEIG--t~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
....+||-+| .+.|..++.+|+. . +.+|+++|.+++-.+.+++. |. +.+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~---~--Ga~Vi~~~~~~~~~~~~~~~-----------------------Ga-~~~ 212 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKK---A--KCHVIGTCSSDEKSAFLKSL-----------------------GC-DRP 212 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHH---T--TCEEEEEESSHHHHHHHHHT-----------------------TC-SEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHh---C--CCEEEEEECCHHHHHHHHHc-----------------------CC-cEE
Confidence 3457899999 4556667777764 3 56899999865433333221 11 110
Q ss_pred cceEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 232 LPVPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.....+..+.+... +..+|+|+--... ..++.+++.|++||.++.--
T Consensus 213 --~~~~~~~~~~~~~~~~~~g~D~vid~~g~------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 213 --INYKTEPVGTVLKQEYPEGVDVVYESVGG------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp --EETTTSCHHHHHHHHCTTCEEEEEECSCT------HHHHHHHHHEEEEEEEEECC
T ss_pred --EecCChhHHHHHHHhcCCCCCEEEECCCH------HHHHHHHHHHhcCCEEEEEe
Confidence 111112222333222 3469998754442 46788999999999888643
No 344
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=85.74 E-value=1.4 Score=42.04 Aligned_cols=42 Identities=12% Similarity=0.157 Sum_probs=26.1
Q ss_pred CCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhh
Q 041517 156 PRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 156 p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~ 201 (327)
..+||=+|+|. |..++.+|++ ++ -.+|+++|.++.-.+.+++
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~---~G-a~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKH---AG-ASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---TT-CSEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH---cC-CCEEEEECCCHHHHHHHHH
Confidence 46888899743 4444455553 43 2389999987765554443
No 345
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=85.18 E-value=0.59 Score=55.26 Aligned_cols=107 Identities=14% Similarity=0.014 Sum_probs=48.5
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCC-CCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLG-LDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~-~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
..+|||||.|+|..+..+...+...+ ...+++-.|+++++.+.+++.++ .+. +
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~----------------~~d----------i 1294 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLE----------------QLH----------V 1294 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHH----------------HHT----------E
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhh----------------hcc----------c
Confidence 35899999999998877777542111 02467788999888776655321 110 2
Q ss_pred EeeecchhhhhhhcCCcEeEEEEc-CCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEID-AGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfID-a~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
....-+..+.-......||+|+.. .-|.-......+..+.++|+|||.+++...
T Consensus 1295 ~~~~~d~~~~~~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1295 TQGQWDPANPAPGSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp EEECCCSSCCCC-----CCEEEEECC--------------------CCEEEEEEC
T ss_pred ccccccccccccCCCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 210000000000012358999854 334333445678899999999999998764
No 346
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=84.95 E-value=1.2 Score=41.14 Aligned_cols=95 Identities=14% Similarity=0.147 Sum_probs=55.2
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..++||-+|+ +.|..++.+++. . +.+|+++|.+++..+.+++. |. +.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~---~--G~~Vi~~~~~~~~~~~~~~~-----------------------g~-~~~- 194 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARH---L--GATVIGTVSTEEKAETARKL-----------------------GC-HHT- 194 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHH---T--TCEEEEEESSHHHHHHHHHH-----------------------TC-SEE-
T ss_pred CCCEEEEECCccHHHHHHHHHHHH---C--CCEEEEEeCCHHHHHHHHHc-----------------------CC-CEE-
Confidence 3578999995 556666666653 3 56999999875433322221 11 110
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.....+..+.+.+. +..+|+++.-+.. ..++.+++.|++||.++.-
T Consensus 195 -~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 195 -INYSTQDFAEVVREITGGKGVDVVYDSIGK------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp -EETTTSCHHHHHHHHHTTCCEEEEEECSCT------TTHHHHHHTEEEEEEEEEC
T ss_pred -EECCCHHHHHHHHHHhCCCCCeEEEECCcH------HHHHHHHHhhccCCEEEEE
Confidence 222122222323222 3469998865553 3468889999999988764
No 347
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=84.89 E-value=1.6 Score=40.39 Aligned_cols=97 Identities=18% Similarity=0.072 Sum_probs=54.9
Q ss_pred CCCEEEEEcCc-chHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSF-LGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~-~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||-+|+| .|..++.+|+. . +.+|+++|.++.-.+.+++. |. +.+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~---~--Ga~Vi~~~~~~~~~~~~~~l-----------------------Ga-~~~-- 212 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKA---M--GLNVVAVDIGDEKLELAKEL-----------------------GA-DLV-- 212 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHH---T--TCEEEEECSCHHHHHHHHHT-----------------------TC-SEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---c--CCEEEEEeCCHHHHHHHHHC-----------------------CC-CEE--
Confidence 45789999984 24555555553 4 46999999876544433321 11 110
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.....+..+.+....+.+|+|+.-... . ..++.+++.|++||.++.-.
T Consensus 213 ~d~~~~~~~~~~~~~~~~~d~vid~~g~---~--~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 213 VNPLKEDAAKFMKEKVGGVHAAVVTAVS---K--PAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp ECTTTSCHHHHHHHHHSSEEEEEESSCC---H--HHHHHHHHHEEEEEEEEECC
T ss_pred ecCCCccHHHHHHHHhCCCCEEEECCCC---H--HHHHHHHHHhhcCCEEEEec
Confidence 1111122222222211469998765442 1 46788899999999887643
No 348
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=84.71 E-value=1.2 Score=40.99 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=54.5
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..++||-+|. +.|..++.+++. . +.+|+++|.+++..+.+++. |.. .+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~---~--G~~V~~~~~~~~~~~~~~~~-----------------------g~~-~~- 189 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKA---L--GAKLIGTVGTAQKAQSALKA-----------------------GAW-QV- 189 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH---H--TCEEEEEESSHHHHHHHHHH-----------------------TCS-EE-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH---c--CCEEEEEeCCHHHHHHHHHc-----------------------CCC-EE-
Confidence 3578999994 445555555553 3 56899999865433322221 110 10
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.....+..+.+.+. +..+|+++.-+. . ..++.+++.|++||.++.--
T Consensus 190 -~~~~~~~~~~~~~~~~~~~~~D~vi~~~g---~---~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 190 -INYREEDLVERLKEITGGKKVRVVYDSVG---R---DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp -EETTTSCHHHHHHHHTTTCCEEEEEECSC---G---GGHHHHHHTEEEEEEEEECC
T ss_pred -EECCCccHHHHHHHHhCCCCceEEEECCc---h---HHHHHHHHHhcCCCEEEEEe
Confidence 211122222222222 246999886655 1 45788899999999887643
No 349
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=83.98 E-value=5 Score=37.37 Aligned_cols=96 Identities=11% Similarity=-0.012 Sum_probs=52.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+||-+|+ |..+...++.++.. +.+|+++|.+++-.+.+++ ..|. +.+ +
T Consensus 180 ~g~~VlV~Ga--G~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~----------------------~lGa-~~v--i 230 (357)
T 2cf5_A 180 PGLRGGILGL--GGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQ----------------------DLGA-DDY--V 230 (357)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHT----------------------TSCC-SCE--E
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHH----------------------HcCC-cee--e
Confidence 4578999996 33444434433334 4689999998765444331 0111 111 1
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
.. .+ .+.+.+....+|+||--.... ..++.+++.|++||.++.--
T Consensus 231 ~~--~~-~~~~~~~~~g~D~vid~~g~~-----~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 231 IG--SD-QAKMSELADSLDYVIDTVPVH-----HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp ET--TC-HHHHHHSTTTEEEEEECCCSC-----CCSHHHHTTEEEEEEEEECS
T ss_pred cc--cc-HHHHHHhcCCCCEEEECCCCh-----HHHHHHHHHhccCCEEEEeC
Confidence 11 11 122333334699886544332 13467889999999888643
No 350
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=83.69 E-value=2.4 Score=41.57 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=38.8
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCC-CcEEEEEeCCCCChhhhhh
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGL-DSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~-~~~V~~ID~~~~~~~~A~~ 201 (327)
.++-.|+|+|.|+|..+.-+.+.++..++ ..+++.||+++.+.+..++
T Consensus 136 ~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~ 184 (432)
T 4f3n_A 136 SGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRE 184 (432)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHH
T ss_pred cCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHH
Confidence 34679999999999999999998876543 4589999999998765443
No 351
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=83.46 E-value=2.2 Score=38.95 Aligned_cols=86 Identities=12% Similarity=-0.041 Sum_probs=50.1
Q ss_pred CCCEEEEEcCc-chHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 155 RPRVIIEVGSF-LGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 155 ~p~~VLEIGt~-~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
...+||=+|+| .|..++.+|++ . +.+|++++ +++-.+.+++. |. +.+
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~---~--Ga~Vi~~~-~~~~~~~~~~l-----------------------Ga-~~v-- 189 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNN---A--GYVVDLVS-ASLSQALAAKR-----------------------GV-RHL-- 189 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH---H--TCEEEEEC-SSCCHHHHHHH-----------------------TE-EEE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---c--CCEEEEEE-ChhhHHHHHHc-----------------------CC-CEE--
Confidence 35789999993 25556666664 3 45999999 77665554432 21 111
Q ss_pred eEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 234 VPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 234 V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+ . + .+ .++..+|+||--... ..++.+++.|++||.++.-
T Consensus 190 ~---~-d-~~---~v~~g~Dvv~d~~g~------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 190 Y---R-E-PS---QVTQKYFAIFDAVNS------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp E---S-S-GG---GCCSCEEEEECC-------------TTGGGEEEEEEEEEE
T ss_pred E---c-C-HH---HhCCCccEEEECCCc------hhHHHHHHHhcCCCEEEEE
Confidence 1 1 2 22 226789987633222 1236678999999987764
No 352
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=83.45 E-value=4 Score=37.77 Aligned_cols=97 Identities=15% Similarity=0.106 Sum_probs=56.5
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..++||-+|+ +.|..++.+++. . +.+|+++|.++...+.+++. |. +.+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~---~--Ga~V~~~~~~~~~~~~~~~~-----------------------g~-~~~- 218 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKA---M--GYRVLGIDGGEGKEELFRSI-----------------------GG-EVF- 218 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH---T--TCEEEEEECSTTHHHHHHHT-----------------------TC-CEE-
T ss_pred CCCEEEEECCCchHHHHHHHHHHH---C--CCcEEEEcCCHHHHHHHHHc-----------------------CC-ceE-
Confidence 3578999998 445555555553 3 56999999877644443321 11 010
Q ss_pred ceEee-ecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 233 PVPFS-SGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 233 ~V~~~-~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+... ..+..+.+... ++.+|+|+.-... ...++.+++.|++||.|+.-.
T Consensus 219 -~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~-----~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 219 -IDFTKEKDIVGAVLKATDGGAHGVINVSVS-----EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp -EETTTCSCHHHHHHHHHTSCEEEEEECSSC-----HHHHHHHTTSEEEEEEEEECC
T ss_pred -EecCccHhHHHHHHHHhCCCCCEEEECCCc-----HHHHHHHHHHHhcCCEEEEEe
Confidence 1111 11222222221 2269998765542 146789999999999888643
No 353
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.28 E-value=2.5 Score=40.22 Aligned_cols=137 Identities=13% Similarity=0.169 Sum_probs=83.7
Q ss_pred hccCCchHH-HHHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHH
Q 041517 136 RIKGWGSYG-AVFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLL 214 (327)
Q Consensus 136 ~~~gw~~~g-~lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~ 214 (327)
..+.|-..- .+|..+......++||-||-..|..+++++.. .++.+.. .+.. ++
T Consensus 18 ~l~a~da~d~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~--------~~~~~~d--s~~~--~~------------- 72 (375)
T 4dcm_A 18 PLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEH--------KPYSIGD--SYIS--EL------------- 72 (375)
T ss_dssp SCCSCCHHHHHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGG--------CCEEEES--CHHH--HH-------------
T ss_pred CCCccchHHHHHHHhhhhccCCCCEEEECCCCCHHHHhhccC--------CceEEEh--HHHH--HH-------------
Confidence 567883333 34555443324468999999999999988742 2345521 1211 11
Q ss_pred HHHHHHHHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCc
Q 041517 215 YFQFLQNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADN 294 (327)
Q Consensus 215 ~~~Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~ 294 (327)
...+|+...++.... |.+.. .+......+|+|.+--.+.......-|..+...|++|+.|++..-..
T Consensus 73 --~~~~n~~~~~~~~~~--~~~~~-----~~~~~~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g~~~---- 139 (375)
T 4dcm_A 73 --ATRENLRLNGIDESS--VKFLD-----STADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKAR---- 139 (375)
T ss_dssp --HHHHHHHHTTCCGGG--SEEEE-----TTSCCCSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEEEEGG----
T ss_pred --HHHHHHHHcCCCccc--eEecc-----cccccccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEEeccc----
Confidence 123466655553221 33321 12233567999999888776667777899999999999887654333
Q ss_pred hhHHHHHHHHHHHcCC
Q 041517 295 RGVRRAVNLFAKINGL 310 (327)
Q Consensus 295 ~GV~~Av~~f~~~~gl 310 (327)
.|++...+.|.+..+.
T Consensus 140 ~~~~~~~~~l~~~~~~ 155 (375)
T 4dcm_A 140 DIHTSTLELFEKVLGP 155 (375)
T ss_dssp GCCHHHHHHHHHHTCC
T ss_pred chHHHHHHHHHhhcCc
Confidence 4567777777666554
No 354
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=82.58 E-value=2 Score=39.84 Aligned_cols=97 Identities=16% Similarity=0.108 Sum_probs=54.9
Q ss_pred CCCEEEEEcCc--chHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGSF--LGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt~--~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..++||-+|++ .|..++.+++. .+ +.+|+++|.+++..+.+++. |. +.+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~---~~-Ga~Vi~~~~~~~~~~~~~~~-----------------------g~-~~~- 220 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKA---VS-GATIIGVDVREEAVEAAKRA-----------------------GA-DYV- 220 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH---HT-CCEEEEEESSHHHHHHHHHH-----------------------TC-SEE-
T ss_pred CCCEEEEECCCccHHHHHHHHHHH---cC-CCeEEEEcCCHHHHHHHHHh-----------------------CC-CEE-
Confidence 45789999986 34444455543 31 46899999876443333221 11 110
Q ss_pred ceEeeecchhhhhhhc-C-CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW-G-VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l-~-~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.....+..+.+..+ + +.+|+|+.-+.. . ..++.+++.|++||.++.-
T Consensus 221 -~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~---~--~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 221 -INASMQDPLAEIRRITESKGVDAVIDLNNS---E--KTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp -EETTTSCHHHHHHHHTTTSCEEEEEESCCC---H--HHHTTGGGGEEEEEEEEEC
T ss_pred -ecCCCccHHHHHHHHhcCCCceEEEECCCC---H--HHHHHHHHHHhcCCEEEEE
Confidence 111112222222222 2 479998865553 1 4678889999999988764
No 355
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=82.37 E-value=1.4 Score=40.81 Aligned_cols=96 Identities=8% Similarity=0.014 Sum_probs=54.7
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..++||-+|+ +.|..++.+|+. . +.+|+++|.+++..+.+++ . .|. +.+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~---~--G~~V~~~~~~~~~~~~~~~-------------------~---~g~-~~~- 205 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKM---M--GCYVVGSAGSKEKVDLLKT-------------------K---FGF-DDA- 205 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH---T--TCEEEEEESSHHHHHHHHH-------------------T---SCC-SEE-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH---C--CCEEEEEeCCHHHHHHHHH-------------------H---cCC-ceE-
Confidence 4578999997 455555555553 3 5689999987544333321 0 111 010
Q ss_pred ceEeeec-chhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSG-SALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~g-da~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+..... +..+.+... +..+|+|+.-... ..++.+++.|++||.++.-
T Consensus 206 -~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 206 -FNYKEESDLTAALKRCFPNGIDIYFENVGG------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp -EETTSCSCSHHHHHHHCTTCEEEEEESSCH------HHHHHHHTTEEEEEEEEEC
T ss_pred -EecCCHHHHHHHHHHHhCCCCcEEEECCCH------HHHHHHHHHHhcCCEEEEE
Confidence 111111 122222222 2469998765442 4688999999999988763
No 356
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=82.37 E-value=5 Score=37.31 Aligned_cols=95 Identities=16% Similarity=0.113 Sum_probs=54.3
Q ss_pred CEEEEEcCcchHHHHHH-HHHh-ccCCCCcE-EEEEeCCCC---ChhhhhhhcccCccccchHHHHHHHHHHhhhccCCc
Q 041517 157 RVIIEVGSFLGASALHM-ANLT-RQLGLDSQ-ILCIDDFRG---WPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDS 230 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~l-A~a~-r~l~~~~~-V~~ID~~~~---~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~ 230 (327)
.+||=+|+ |..++.. ++.+ +.+ +.+ |+++|.+++ -.+.+++. |. +.
T Consensus 174 ~~VlV~Ga--G~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~l-----------------------Ga-~~ 225 (357)
T 2b5w_A 174 SSAFVLGN--GSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEEL-----------------------DA-TY 225 (357)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHHT-----------------------TC-EE
T ss_pred CEEEEECC--CHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHHc-----------------------CC-cc
Confidence 79999997 4444444 4444 444 444 999999876 45544432 11 00
Q ss_pred ccceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcC
Q 041517 231 VLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 231 v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~ 288 (327)
+.....+..+ +.++++.+|+||--... . ..++.+++.|++||.++.--.
T Consensus 226 ---v~~~~~~~~~-i~~~~gg~Dvvid~~g~---~--~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 226 ---VDSRQTPVED-VPDVYEQMDFIYEATGF---P--KHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp ---EETTTSCGGG-HHHHSCCEEEEEECSCC---H--HHHHHHHHHEEEEEEEEECCC
T ss_pred ---cCCCccCHHH-HHHhCCCCCEEEECCCC---h--HHHHHHHHHHhcCCEEEEEeC
Confidence 1111112222 22223379998643332 1 467889999999998886443
No 357
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=82.19 E-value=1.9 Score=40.77 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=53.2
Q ss_pred CCEEEEEcCcc-hHHHHHHHHHhccCCCC-cEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 156 PRVIIEVGSFL-GASALHMANLTRQLGLD-SQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 156 p~~VLEIGt~~-G~Sal~lA~a~r~l~~~-~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
..+||-+|+|. |..++.+|++ + + .+|+++|.+++-.+.+++. |. +.+
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~---~--Ga~~Vi~~~~~~~~~~~~~~l-----------------------Ga-~~v-- 244 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARS---L--GAENVIVIAGSPNRLKLAEEI-----------------------GA-DLT-- 244 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH---T--TBSEEEEEESCHHHHHHHHHT-----------------------TC-SEE--
T ss_pred CCEEEEECcCHHHHHHHHHHHH---c--CCceEEEEcCCHHHHHHHHHc-----------------------CC-cEE--
Confidence 47899999532 4445555553 3 5 5999999876544444332 11 111
Q ss_pred eEee---ecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 234 VPFS---SGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 234 V~~~---~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+... ..+..+.+.+. +..+|+||--... . ..++.+++.|++||.++.-
T Consensus 245 i~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~--~---~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 245 LNRRETSVEERRKAIMDITHGRGADFILEATGD--S---RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp EETTTSCHHHHHHHHHHHTTTSCEEEEEECSSC--T---THHHHHHHHEEEEEEEEEC
T ss_pred EeccccCcchHHHHHHHHhCCCCCcEEEECCCC--H---HHHHHHHHHHhcCCEEEEE
Confidence 1111 11112223222 2369998754432 1 3578889999999988864
No 358
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=82.14 E-value=1.8 Score=39.67 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=48.8
Q ss_pred eEeeecchhhhhhhc-CCcEeEEEEcCCC----CCCc-----------------HHHHHHHHHccCCCCeEEEEE--cCC
Q 041517 234 VPFSSGSALTKLCEW-GVVGDLIEIDAGH----DFNS-----------------AWADINRAWRILRPGGVIFGH--DYF 289 (327)
Q Consensus 234 V~~~~gda~~~L~~l-~~~fDLIfIDa~h----~~~~-----------------v~~dl~~~~~lL~pGGvIi~d--D~~ 289 (327)
+.+..||+.+.++.+ +++||+|+.|--- .+.. ...-++++.++|+|||.|++. |..
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~ 101 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVA 101 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEE
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCc
Confidence 788999999988766 4799999998432 1100 112356788999999977543 221
Q ss_pred CCCCchh------HHHHHHHHHHHcCCeEE
Q 041517 290 TAADNRG------VRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 290 ~~~~~~G------V~~Av~~f~~~~gl~v~ 313 (327)
......| ....+..++++.|+.+.
T Consensus 102 ~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~ 131 (297)
T 2zig_A 102 VARRRFGRHLVFPLHADIQVRCRKLGFDNL 131 (297)
T ss_dssp EECC----EEEECHHHHHHHHHHHTTCEEE
T ss_pred cccccCCcccccccHHHHHHHHHHcCCeee
Confidence 1000001 33456667777787654
No 359
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=81.93 E-value=1.4 Score=41.15 Aligned_cols=96 Identities=16% Similarity=0.131 Sum_probs=55.1
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|. +.|..++.+|+. . +.+|+++|.+++-.+.+++. |.. .+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~---~--Ga~Vi~~~~~~~~~~~~~~l-----------------------Ga~-~~- 216 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARA---F--GAEVYATAGSTGKCEACERL-----------------------GAK-RG- 216 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH---T--TCEEEEEESSHHHHHHHHHH-----------------------TCS-EE-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH---c--CCEEEEEeCCHHHHHHHHhc-----------------------CCC-EE-
Confidence 3578998853 345556666653 3 56899999876544433321 111 10
Q ss_pred ceEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 233 PVPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.....+..+.+... +..+|+|+.-... ..++.+++.|++||.++.--
T Consensus 217 -~~~~~~~~~~~~~~~~~~g~Dvvid~~g~------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 217 -INYRSEDFAAVIKAETGQGVDIILDMIGA------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp -EETTTSCHHHHHHHHHSSCEEEEEESCCG------GGHHHHHHTEEEEEEEEECC
T ss_pred -EeCCchHHHHHHHHHhCCCceEEEECCCH------HHHHHHHHHhccCCEEEEEE
Confidence 222222222322221 4679988765543 25678899999999887643
No 360
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=81.64 E-value=1.4 Score=41.30 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=53.9
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..++||-+|+ +.|..++.+++. . +.+|+++|.+++..+.+++. |. +.+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~---~--Ga~Vi~~~~~~~~~~~~~~~-----------------------ga-~~~- 219 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARA---Y--GLKILGTAGTEEGQKIVLQN-----------------------GA-HEV- 219 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHH---T--TCEEEEEESSHHHHHHHHHT-----------------------TC-SEE-
T ss_pred CcCEEEEECCCChHHHHHHHHHHH---C--CCEEEEEeCChhHHHHHHHc-----------------------CC-CEE-
Confidence 3578999997 445555555553 3 56899999876433333221 11 010
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.....+..+.+.+. +..+|+|+.-+.. ..++.+++.|++||.++.-
T Consensus 220 -~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~------~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 220 -FNHREVNYIDKIKKYVGEKGIDIIIEMLAN------VNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp -EETTSTTHHHHHHHHHCTTCEEEEEESCHH------HHHHHHHHHEEEEEEEEEC
T ss_pred -EeCCCchHHHHHHHHcCCCCcEEEEECCCh------HHHHHHHHhccCCCEEEEE
Confidence 111122222222221 2479998765442 3577889999999988764
No 361
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=81.59 E-value=1.9 Score=39.87 Aligned_cols=95 Identities=19% Similarity=0.139 Sum_probs=53.0
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCc-EEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDS-QILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~-~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|+|. |..++.+|+. . +. +|+++|.+++..+.+++. . +.+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~---~--Ga~~Vi~~~~~~~~~~~~~~l-a------------------------~~v- 212 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRA---S--GAGPILVSDPNPYRLAFARPY-A------------------------DRL- 212 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHH---T--TCCSEEEECSCHHHHGGGTTT-C------------------------SEE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---c--CCCEEEEECCCHHHHHHHHHh-H------------------------Hhc-
Confidence 567899999832 4445555553 3 45 899999876544433321 0 010
Q ss_pred ceEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.....+..+.+.+. +..+|+|+--... . ..++.+++.|++||.++.-
T Consensus 213 -~~~~~~~~~~~~~~~~~~g~D~vid~~g~---~--~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 213 -VNPLEEDLLEVVRRVTGSGVEVLLEFSGN---E--AAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp -ECTTTSCHHHHHHHHHSSCEEEEEECSCC---H--HHHHHHHHHEEEEEEEEEC
T ss_pred -cCcCccCHHHHHHHhcCCCCCEEEECCCC---H--HHHHHHHHHHhcCCEEEEE
Confidence 111111112222221 4569998754332 1 4678889999999988764
No 362
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=81.38 E-value=2.1 Score=39.67 Aligned_cols=95 Identities=13% Similarity=0.131 Sum_probs=56.3
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|+ +.|..++.+++. . +.+|+++|.+++..+.+++. |. +.+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~---~--G~~Vi~~~~~~~~~~~~~~~-----------------------ga-~~~- 215 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKL---F--GARVIATAGSEDKLRRAKAL-----------------------GA-DET- 215 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHH---T--TCEEEEEESSHHHHHHHHHH-----------------------TC-SEE-
T ss_pred CCCEEEEECCCchHHHHHHHHHHH---C--CCEEEEEeCCHHHHHHHHhc-----------------------CC-CEE-
Confidence 3578999998 566677777764 3 56899999875443333221 11 111
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.....+..+.+.+. +..+|+|+.-+. . ..++.+++.|++||.++.-
T Consensus 216 -~d~~~~~~~~~~~~~~~~~~~d~vi~~~g-~-----~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 216 -VNYTHPDWPKEVRRLTGGKGADKVVDHTG-A-----LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp -EETTSTTHHHHHHHHTTTTCEEEEEESSC-S-----SSHHHHHHHEEEEEEEEES
T ss_pred -EcCCcccHHHHHHHHhCCCCceEEEECCC-H-----HHHHHHHHhhccCCEEEEE
Confidence 222122222223222 247999886655 2 2467888999999988764
No 363
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=81.37 E-value=4.4 Score=38.04 Aligned_cols=42 Identities=14% Similarity=0.038 Sum_probs=31.9
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCC-cEEEEEeCCCCChhhhhh
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLD-SQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~-~~V~~ID~~~~~~~~A~~ 201 (327)
+.+|+|+.||.|..++.+.++ +-. ..++++|.++...+..+.
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~----G~~~~~v~~~E~d~~a~~~~~~ 44 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRES----CIPAQVVAAIDVNTVANEVYKY 44 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHH----TCSEEEEEEECCCHHHHHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHC----CCCceEEEEEeCCHHHHHHHHH
Confidence 458999999999999998885 211 369999998766554444
No 364
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=80.66 E-value=3 Score=38.21 Aligned_cols=92 Identities=11% Similarity=0.040 Sum_probs=52.8
Q ss_pred EEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 158 VIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 158 ~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
+||-+|+ +.|..++.+|+. . +.+|++++.+++-.+.+++. |. +.+ +.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~---~--Ga~vi~~~~~~~~~~~~~~l-----------------------Ga-~~~--i~ 200 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAK---R--GYTVEASTGKAAEHDYLRVL-----------------------GA-KEV--LA 200 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHH---T--TCCEEEEESCTTCHHHHHHT-----------------------TC-SEE--EE
T ss_pred eEEEecCCCHHHHHHHHHHHH---C--CCEEEEEECCHHHHHHHHHc-----------------------CC-cEE--Ee
Confidence 7999997 556666667764 3 46799999987766555432 11 111 11
Q ss_pred eeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 236 FSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 236 ~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
....+ .+.+... +..+|+||--... ..++.+++.|++||.++.--
T Consensus 201 ~~~~~-~~~~~~~~~~~~d~vid~~g~------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 201 REDVM-AERIRPLDKQRWAAAVDPVGG------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CC----------CCSCCEEEEEECSTT------TTHHHHHHTEEEEEEEEECS
T ss_pred cCCcH-HHHHHHhcCCcccEEEECCcH------HHHHHHHHhhccCCEEEEEe
Confidence 11111 1111222 2469988654432 24678899999999888643
No 365
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=80.51 E-value=2.8 Score=39.33 Aligned_cols=95 Identities=13% Similarity=0.102 Sum_probs=55.6
Q ss_pred CCEEEEEc-C-cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 156 PRVIIEVG-S-FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 156 p~~VLEIG-t-~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
..+||=+| + +.|..++.+|+++ + +.+|+++|..++-.+.+++. |. +.+
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~---~-g~~Vi~~~~~~~~~~~~~~l-----------------------Ga-d~v-- 221 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQR---T-DLTVIATASRPETQEWVKSL-----------------------GA-HHV-- 221 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHH---C-CSEEEEECSSHHHHHHHHHT-----------------------TC-SEE--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHh---c-CCEEEEEeCCHHHHHHHHHc-----------------------CC-CEE--
Confidence 35788888 4 3466677777642 2 67999999876544443331 21 111
Q ss_pred eEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 234 VPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 234 V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.. ..+..+.+.++ ++.+|+|+--.. ....++.+++.|++||.++.-
T Consensus 222 i~~-~~~~~~~v~~~~~~g~Dvvid~~g-----~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 222 IDH-SKPLAAEVAALGLGAPAFVFSTTH-----TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ECT-TSCHHHHHHTTCSCCEEEEEECSC-----HHHHHHHHHHHSCTTCEEEEC
T ss_pred EeC-CCCHHHHHHHhcCCCceEEEECCC-----chhhHHHHHHHhcCCCEEEEE
Confidence 111 11222333333 357998765333 124678999999999988864
No 366
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=79.50 E-value=7.8 Score=36.20 Aligned_cols=96 Identities=15% Similarity=0.021 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
...+||=+|+ |..+..+++.++.. +.+|+++|.++.-.+.+++ ..|. +.+ +
T Consensus 187 ~g~~VlV~Ga--G~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----------------------~lGa-~~v--~ 237 (366)
T 1yqd_A 187 PGKHIGIVGL--GGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALK----------------------NFGA-DSF--L 237 (366)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHH----------------------TSCC-SEE--E
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----------------------hcCC-ceE--E
Confidence 4578888996 44444444444444 4689999987654443321 0111 111 1
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
.. .+ .+.+.+..+.+|+|+.-..... .++.+++.|++||.|+.-.
T Consensus 238 ~~--~~-~~~~~~~~~~~D~vid~~g~~~-----~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 238 VS--RD-QEQMQAAAGTLDGIIDTVSAVH-----PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp ET--TC-HHHHHHTTTCEEEEEECCSSCC-----CSHHHHHHEEEEEEEEECC
T ss_pred ec--cC-HHHHHHhhCCCCEEEECCCcHH-----HHHHHHHHHhcCCEEEEEc
Confidence 11 11 1223333346999875544321 2467778899999887643
No 367
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=78.76 E-value=1.8 Score=40.41 Aligned_cols=96 Identities=11% Similarity=0.055 Sum_probs=54.2
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|. +.|..++.+++. . +.+|+++|.+++..+.+++. |. +.+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~---~--Ga~Vi~~~~~~~~~~~~~~~-----------------------g~-~~~- 211 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRM---A--GAIPLVTAGSQKKLQMAEKL-----------------------GA-AAG- 211 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH---T--TCEEEEEESCHHHHHHHHHH-----------------------TC-SEE-
T ss_pred CCCEEEEECCccHHHHHHHHHHHH---c--CCEEEEEeCCHHHHHHHHHc-----------------------CC-cEE-
Confidence 3578999984 445555555553 3 56899999875433333221 11 110
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+.....+..+.+... +..+|+++.-+.. ..++.+++.|++||.++.--
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 212 -FNYKKEDFSEATLKFTKGAGVNLILDCIGG------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp -EETTTSCHHHHHHHHTTTSCEEEEEESSCG------GGHHHHHHHEEEEEEEEECC
T ss_pred -EecCChHHHHHHHHHhcCCCceEEEECCCc------hHHHHHHHhccCCCEEEEEe
Confidence 221122222323222 2469998766553 24677889999999888743
No 368
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=78.73 E-value=2.8 Score=38.96 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=52.9
Q ss_pred CEEEEEcC--cchHHHHHHHHHhccCCCCc-EEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccc
Q 041517 157 RVIIEVGS--FLGASALHMANLTRQLGLDS-QILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLP 233 (327)
Q Consensus 157 ~~VLEIGt--~~G~Sal~lA~a~r~l~~~~-~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~ 233 (327)
++||=+|+ +.|..++.+++. . +. +|+++|.+++..+.+++ . .|. +.+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~---~--Ga~~Vi~~~~~~~~~~~~~~-------------------~---~g~-~~~-- 211 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHF---L--GCSRVVGICGTHEKCILLTS-------------------E---LGF-DAA-- 211 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH---T--TCSEEEEEESCHHHHHHHHH-------------------T---SCC-SEE--
T ss_pred cEEEEECCCcHHHHHHHHHHHH---C--CCCeEEEEeCCHHHHHHHHH-------------------H---cCC-ceE--
Confidence 78999997 344444444443 3 45 89999986543322221 0 111 110
Q ss_pred eEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 234 VPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 234 V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.....+..+.+... ++.+|+++.-+.. ..++.+++.|++||.++.-
T Consensus 212 ~d~~~~~~~~~~~~~~~~~~d~vi~~~G~------~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 212 INYKKDNVAEQLRESCPAGVDVYFDNVGG------NISDTVISQMNENSHIILC 259 (357)
T ss_dssp EETTTSCHHHHHHHHCTTCEEEEEESCCH------HHHHHHHHTEEEEEEEEEC
T ss_pred EecCchHHHHHHHHhcCCCCCEEEECCCH------HHHHHHHHHhccCcEEEEE
Confidence 221122222223222 2369998866552 5688999999999988864
No 369
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=77.79 E-value=3.2 Score=38.43 Aligned_cols=96 Identities=13% Similarity=0.130 Sum_probs=53.8
Q ss_pred CCCEEEEEcCcc-hHHHHHHHHHhccCCCCc-EEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGSFL-GASALHMANLTRQLGLDS-QILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~-~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|+|. |..++.+|+. . +. +|+++|.++.-.+.+++. |. +.+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~---~--Ga~~Vi~~~~~~~~~~~~~~~-----------------------Ga-~~~- 216 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKA---S--GAYPVIVSEPSDFRRELAKKV-----------------------GA-DYV- 216 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH---T--TCCSEEEECSCHHHHHHHHHH-----------------------TC-SEE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---c--CCCEEEEECCCHHHHHHHHHh-----------------------CC-CEE-
Confidence 457899999832 4444555543 4 45 899999875544333321 11 111
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.....+..+.+.++ +..+|+|+.-... . ..++.+++.|++||.++.-
T Consensus 217 -~~~~~~~~~~~v~~~~~g~g~D~vid~~g~---~--~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 217 -INPFEEDVVKEVMDITDGNGVDVFLEFSGA---P--KALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp -ECTTTSCHHHHHHHHTTTSCEEEEEECSCC---H--HHHHHHHHHEEEEEEEEEC
T ss_pred -ECCCCcCHHHHHHHHcCCCCCCEEEECCCC---H--HHHHHHHHHHhcCCEEEEE
Confidence 111112222333332 2469998754432 1 4678889999999988764
No 370
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=77.43 E-value=55 Score=31.80 Aligned_cols=131 Identities=15% Similarity=0.118 Sum_probs=71.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+.-+|.=||+ |+.+..||..+.. .+.+|+++|.+++-.+...+- .... -++.+.+-+.+++. .+ + +
T Consensus 7 ~~~~~~vIGl--G~vG~~~A~~La~--~G~~V~~~D~~~~kv~~l~~g-~~~~--~epgl~~~~~~~~~-~g---~---l 72 (446)
T 4a7p_A 7 GSVRIAMIGT--GYVGLVSGACFSD--FGHEVVCVDKDARKIELLHQN-VMPI--YEPGLDALVASNVK-AG---R---L 72 (446)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHH--TTCEEEEECSCSTTHHHHTTT-CCSS--CCTTHHHHHHHHHH-TT---C---E
T ss_pred CceEEEEEcC--CHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHhcC-CCCc--cCCCHHHHHHhhcc-cC---C---E
Confidence 4557888888 7777777765432 268999999999866533321 1111 11111111112221 12 1 4
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCC---------cHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHH
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFN---------SAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFA 305 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~---------~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~ 305 (327)
.+.. +..+.+. ..|+||+--.-+.. .+...++.+.+.|++|.+||..--. .||..+.+.+..
T Consensus 73 ~~tt-d~~ea~~----~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv----~pgtt~~l~~~l 143 (446)
T 4a7p_A 73 SFTT-DLAEGVK----DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTV----PVGTGDEVERII 143 (446)
T ss_dssp EEES-CHHHHHT----TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCC----CTTHHHHHHHHH
T ss_pred EEEC-CHHHHHh----cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCC----CchHHHHHHHHH
Confidence 4433 2223332 36888875322211 3667778888999999888774432 367666665555
Q ss_pred HHc
Q 041517 306 KIN 308 (327)
Q Consensus 306 ~~~ 308 (327)
.+.
T Consensus 144 ~e~ 146 (446)
T 4a7p_A 144 AEV 146 (446)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 371
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=77.28 E-value=5.2 Score=36.42 Aligned_cols=91 Identities=11% Similarity=0.124 Sum_probs=54.4
Q ss_pred CEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 157 RVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 157 ~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
++||=+|+ +.|..++.+|++ . +.+|+++|.+++-.+.+++. |. +.+ +
T Consensus 148 g~VlV~Ga~G~vG~~aiqla~~---~--Ga~Vi~~~~~~~~~~~~~~l-----------------------Ga-~~v--i 196 (324)
T 3nx4_A 148 GEVVVTGASGGVGSTAVALLHK---L--GYQVAAVSGRESTHGYLKSL-----------------------GA-NRI--L 196 (324)
T ss_dssp CCEEESSTTSHHHHHHHHHHHH---T--TCCEEEEESCGGGHHHHHHH-----------------------TC-SEE--E
T ss_pred CeEEEECCCcHHHHHHHHHHHH---c--CCEEEEEeCCHHHHHHHHhc-----------------------CC-CEE--E
Confidence 35999996 556677777775 3 56899999887655554432 11 110 1
Q ss_pred Eeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 235 PFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 235 ~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
.....+ . +..+ +..+|+|| |+.- . ..++.+++.|++||.++.--
T Consensus 197 ~~~~~~--~-~~~~~~~~~d~v~-d~~g---~--~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 197 SRDEFA--E-SRPLEKQLWAGAI-DTVG---D--KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EGGGSS--C-CCSSCCCCEEEEE-ESSC---H--HHHHHHHHTEEEEEEEEECC
T ss_pred ecCCHH--H-HHhhcCCCccEEE-ECCC---c--HHHHHHHHHHhcCCEEEEEe
Confidence 111100 0 1111 35799865 4431 1 37889999999999888753
No 372
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=76.66 E-value=7.6 Score=35.84 Aligned_cols=39 Identities=21% Similarity=0.138 Sum_probs=28.4
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCCh
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWP 196 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~ 196 (327)
..+|.=||+ |..+..+|+.++..+...+|+++|.+++..
T Consensus 33 ~~kI~IIG~--G~mG~slA~~l~~~G~~~~V~~~dr~~~~~ 71 (314)
T 3ggo_A 33 MQNVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPESI 71 (314)
T ss_dssp CSEEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred CCEEEEEee--CHHHHHHHHHHHhCCCCCEEEEEECCHHHH
Confidence 368999997 777777777766555444899999976543
No 373
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=76.42 E-value=6.5 Score=36.76 Aligned_cols=95 Identities=17% Similarity=0.189 Sum_probs=52.7
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
+..+||=+|. +.|..++.+|+. . +.+|++++ .+.-.+.+++. |. +.+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~---~--Ga~Vi~~~-~~~~~~~~~~l-----------------------Ga-~~v- 231 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKA---W--DAHVTAVC-SQDASELVRKL-----------------------GA-DDV- 231 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH---T--TCEEEEEE-CGGGHHHHHHT-----------------------TC-SEE-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHh---C--CCEEEEEe-ChHHHHHHHHc-----------------------CC-CEE-
Confidence 3578999993 345556666664 3 46899888 44333332221 21 111
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.....+..+.+... ..+|+|+--.... ...++..++.|++||.++.-
T Consensus 232 -~~~~~~~~~~~~~~~-~g~D~vid~~g~~----~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 232 -IDYKSGSVEEQLKSL-KPFDFILDNVGGS----TETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp -EETTSSCHHHHHHTS-CCBSEEEESSCTT----HHHHGGGGBCSSSCCEEEES
T ss_pred -EECCchHHHHHHhhc-CCCCEEEECCCCh----hhhhHHHHHhhcCCcEEEEe
Confidence 222222223333332 4689987544432 13467888999999988863
No 374
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=75.64 E-value=5 Score=36.72 Aligned_cols=91 Identities=13% Similarity=0.072 Sum_probs=53.2
Q ss_pred EEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 158 VIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 158 ~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
+||=+|+ +.|..++.+|+. . +.++++++.+++-.+.+++.. . +.+ +.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~---~--Ga~vi~~~~~~~~~~~~~~lG-----------------------a-~~v--~~ 201 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNK---R--GYDVVASTGNREAADYLKQLG-----------------------A-SEV--IS 201 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHH---H--TCCEEEEESSSSTHHHHHHHT-----------------------C-SEE--EE
T ss_pred eEEEECCCCHHHHHHHHHHHH---C--CCEEEEEeCCHHHHHHHHHcC-----------------------C-cEE--EE
Confidence 8999997 456666666664 3 467999999876655554321 1 010 11
Q ss_pred eeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 236 FSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 236 ~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
....+ .+.+... +..+|+||--... ..++.+++.|++||.++.-
T Consensus 202 ~~~~~-~~~~~~~~~~~~d~vid~~g~------~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 202 REDVY-DGTLKALSKQQWQGAVDPVGG------KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp HHHHC-SSCCCSSCCCCEEEEEESCCT------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCch-HHHHHHhhcCCccEEEECCcH------HHHHHHHHhhcCCCEEEEE
Confidence 00000 0111111 2468987644432 3678999999999988864
No 375
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=74.99 E-value=4.6 Score=32.26 Aligned_cols=93 Identities=14% Similarity=0.078 Sum_probs=54.4
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|+=||+ |..+..+|+.++.. +.+|+.+|.+++..+..++ .| +..
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~-----------------------~g-------~~~ 53 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRE-----------------------RG-------VRA 53 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH-----------------------TT-------CEE
T ss_pred CCEEEECc--CHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH-----------------------cC-------CCE
Confidence 57888998 88888888876543 6789999998654332211 12 333
Q ss_pred eecchh--hhhhhcC-CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEE
Q 041517 237 SSGSAL--TKLCEWG-VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 237 ~~gda~--~~L~~l~-~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
..||+. +.|...+ ..+|+|++-...+.. -..+-...+.+.|+..|+.
T Consensus 54 i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~--n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 54 VLGNAANEEIMQLAHLECAKWLILTIPNGYE--AGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp EESCTTSHHHHHHTTGGGCSEEEECCSCHHH--HHHHHHHHHHHCSSSEEEE
T ss_pred EECCCCCHHHHHhcCcccCCEEEEECCChHH--HHHHHHHHHHHCCCCeEEE
Confidence 444433 2343332 468888875443211 1223345566777776665
No 376
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=74.87 E-value=4.6 Score=37.35 Aligned_cols=57 Identities=23% Similarity=0.339 Sum_probs=40.2
Q ss_pred CcEeEEEEcCCCCC--CcHHHHH----------HHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHc
Q 041517 250 VVGDLIEIDAGHDF--NSAWADI----------NRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKIN 308 (327)
Q Consensus 250 ~~fDLIfIDa~h~~--~~v~~dl----------~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~ 308 (327)
++||+|||+..-+| +...+.- ..++.+|+|||.+++--|..+ .+--...|..+++..
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyA--DR~SE~vV~alARkF 278 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYA--DRTSERVICVLGRKF 278 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCC--SHHHHHHHHHHHTTE
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccc--ccchHHHHHHHHhhh
Confidence 78999999987554 2222222 245779999999999999873 355666777776643
No 377
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=72.81 E-value=8.9 Score=35.68 Aligned_cols=95 Identities=19% Similarity=0.168 Sum_probs=53.9
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC---CChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR---GWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~---~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
.++||-+|+ |..+..+++.++.. +.+|+++|.++ +-.+.+++ + |. +.
T Consensus 181 g~~VlV~Ga--G~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~--------------------~---ga-~~-- 230 (366)
T 2cdc_A 181 CRKVLVVGT--GPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE--------------------T---KT-NY-- 230 (366)
T ss_dssp TCEEEEESC--HHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH--------------------H---TC-EE--
T ss_pred CCEEEEECC--CHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH--------------------h---CC-ce--
Confidence 679999998 44445444444444 45999999876 32222221 1 21 11
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHH-HHHHccCCCCeEEEEEcC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADI-NRAWRILRPGGVIFGHDY 288 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl-~~~~~lL~pGGvIi~dD~ 288 (327)
+. .. +..+.+.+.+..+|+|+.-.... ..+ +.+++.|++||.|+.-..
T Consensus 231 -v~-~~-~~~~~~~~~~~~~d~vid~~g~~-----~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 231 -YN-SS-NGYDKLKDSVGKFDVIIDATGAD-----VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp -EE-CT-TCSHHHHHHHCCEEEEEECCCCC-----THHHHHHGGGEEEEEEEEECSC
T ss_pred -ec-hH-HHHHHHHHhCCCCCEEEECCCCh-----HHHHHHHHHHHhcCCEEEEEec
Confidence 21 11 11122211125699987655431 245 888999999998887544
No 378
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=72.77 E-value=12 Score=34.96 Aligned_cols=95 Identities=9% Similarity=0.048 Sum_probs=55.1
Q ss_pred CCCEEEEEcCc--chHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGSF--LGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt~--~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||=+|.+ .|..++.+|++ . +.+|+++. ++.-.+.+++. |. +.+
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~---~--Ga~Vi~~~-~~~~~~~~~~l-----------------------Ga-~~v- 212 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRL---S--GYIPIATC-SPHNFDLAKSR-----------------------GA-EEV- 212 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHH---T--TCEEEEEE-CGGGHHHHHHT-----------------------TC-SEE-
T ss_pred CCcEEEEECCCcHHHHHHHHHHHH---C--CCEEEEEe-CHHHHHHHHHc-----------------------CC-cEE-
Confidence 45789999983 67777777775 3 56788874 54433333331 21 111
Q ss_pred ceEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccC-CCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRIL-RPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL-~pGGvIi~d 286 (327)
+.....+..+.+.++ ++.+|+||--... + ..++.+++.| ++||.++.-
T Consensus 213 -i~~~~~~~~~~v~~~t~g~~d~v~d~~g~---~--~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 213 -FDYRAPNLAQTIRTYTKNNLRYALDCITN---V--ESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp -EETTSTTHHHHHHHHTTTCCCEEEESSCS---H--HHHHHHHHHSCTTCEEEEES
T ss_pred -EECCCchHHHHHHHHccCCccEEEECCCc---h--HHHHHHHHHhhcCCCEEEEE
Confidence 222233333334333 3459998743332 1 4678888889 699988764
No 379
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=72.62 E-value=6.6 Score=36.29 Aligned_cols=94 Identities=14% Similarity=0.133 Sum_probs=53.0
Q ss_pred CCCEEEEEc-C-cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVG-S-FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIG-t-~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
+..+||=+| + +.|..++.+|++ . +.+|+++|.++.-.+.+++. |. +.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~---~--Ga~Vi~~~~~~~~~~~~~~l-----------------------Ga-~~v- 199 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA---Y--GLRVITTASRNETIEWTKKM-----------------------GA-DIV- 199 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH---T--TCEEEEECCSHHHHHHHHHH-----------------------TC-SEE-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH---c--CCEEEEEeCCHHHHHHHHhc-----------------------CC-cEE-
Confidence 457899884 3 235555555553 3 46999999866544333321 21 111
Q ss_pred ceEeeecchhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEE
Q 041517 233 PVPFSSGSALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
+.. ..+..+.+... +..+|+|+--... ...++.+++.|++||.++.
T Consensus 200 -i~~-~~~~~~~~~~~~~~g~Dvv~d~~g~-----~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 200 -LNH-KESLLNQFKTQGIELVDYVFCTFNT-----DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp -ECT-TSCHHHHHHHHTCCCEEEEEESSCH-----HHHHHHHHHHEEEEEEEEE
T ss_pred -EEC-CccHHHHHHHhCCCCccEEEECCCc-----hHHHHHHHHHhccCCEEEE
Confidence 111 11222333332 3579988753331 2457889999999998875
No 380
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=72.57 E-value=24 Score=34.45 Aligned_cols=129 Identities=11% Similarity=0.006 Sum_probs=66.0
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|.=||+ |+.+..+|..+...+.+.+|+++|.+++..+..++.. ... -+..+ ..++... .... +.+
T Consensus 10 mkI~VIG~--G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~-~~i--~e~gl-~~~~~~~----~~~~---l~~ 76 (481)
T 2o3j_A 10 SKVVCVGA--GYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDK-LPI--YEPGL-DEIVFAA----RGRN---LFF 76 (481)
T ss_dssp CEEEEECC--STTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS-CSS--CCTTH-HHHHHHH----BTTT---EEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCC-CCc--CCCCH-HHHHHHh----hcCC---EEE
Confidence 47888988 5665555555444444679999999876443222110 000 00000 0111110 0111 343
Q ss_pred eecchhhhhhhcCCcEeEEEEcCCCCC----------C---cHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHH
Q 041517 237 SSGSALTKLCEWGVVGDLIEIDAGHDF----------N---SAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNL 303 (327)
Q Consensus 237 ~~gda~~~L~~l~~~fDLIfIDa~h~~----------~---~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~ 303 (327)
.. +..+.+. ..|+||+-..-+. . .+...++.+.+.|++|.+|+..--. .+|..+.+..
T Consensus 77 t~-~~~~~~~----~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv----~~gt~~~l~~ 147 (481)
T 2o3j_A 77 SS-DIPKAIA----EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTV----PVKAAESIGC 147 (481)
T ss_dssp ES-CHHHHHH----HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCC----CTTHHHHHHH
T ss_pred EC-CHHHHhh----cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCC----CCCHHHHHHH
Confidence 32 2223232 3689988632211 1 2566677888899998877643222 3566665666
Q ss_pred HHHH
Q 041517 304 FAKI 307 (327)
Q Consensus 304 f~~~ 307 (327)
...+
T Consensus 148 ~l~~ 151 (481)
T 2o3j_A 148 ILRE 151 (481)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5555
No 381
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=71.50 E-value=46 Score=30.36 Aligned_cols=116 Identities=11% Similarity=-0.033 Sum_probs=66.7
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCC-cEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLD-SQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~-~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
.+|.=||+ |..+..||..+... + .+|+++|.+++..+.+++. .+.+...| +
T Consensus 25 m~IgvIG~--G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~----------------~~~~~~~g-------~- 76 (317)
T 4ezb_A 25 TTIAFIGF--GEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGAL----------------RARAAELG-------V- 76 (317)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHH----------------HHHHHHTT-------C-
T ss_pred CeEEEECc--cHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHH----------------HHHHHHCC-------C-
Confidence 57888997 77777777765432 4 6999999987433322221 11121112 1
Q ss_pred eeec-chhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 236 FSSG-SALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 236 ~~~g-da~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
. . +..+.+ ...|+|++=..- ......++.+.+.+++|.+||-..- ..++..+.+.+...+.|+..
T Consensus 77 ~--~~s~~e~~----~~aDvVi~avp~--~~~~~~~~~i~~~l~~~~ivv~~st----~~p~~~~~~~~~l~~~g~~~ 142 (317)
T 4ezb_A 77 E--PLDDVAGI----ACADVVLSLVVG--AATKAVAASAAPHLSDEAVFIDLNS----VGPDTKALAAGAIATGKGSF 142 (317)
T ss_dssp E--EESSGGGG----GGCSEEEECCCG--GGHHHHHHHHGGGCCTTCEEEECCS----CCHHHHHHHHHHHHTSSCEE
T ss_pred C--CCCHHHHH----hcCCEEEEecCC--HHHHHHHHHHHhhcCCCCEEEECCC----CCHHHHHHHHHHHHHcCCeE
Confidence 1 1 111222 236888875432 3344566888888998887664332 23676677776666666544
No 382
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=71.40 E-value=4.8 Score=37.27 Aligned_cols=92 Identities=13% Similarity=0.123 Sum_probs=53.0
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
...+||-+|+ +.|..++.+|+. . +.+|+++ .+++-.+.+++ .|.. .
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~---~--Ga~Vi~~-~~~~~~~~~~~-----------------------lGa~-~-- 197 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALA---R--GARVFAT-ARGSDLEYVRD-----------------------LGAT-P-- 197 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH---T--TCEEEEE-ECHHHHHHHHH-----------------------HTSE-E--
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH---C--CCEEEEE-eCHHHHHHHHH-----------------------cCCC-E--
Confidence 3578999994 446666666664 3 5689988 54433322222 1211 0
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+. ...+..+.+... +..+|+||--... ..++.+++.|++||.++.-
T Consensus 198 -i~-~~~~~~~~~~~~~~~~g~D~vid~~g~------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 198 -ID-ASREPEDYAAEHTAGQGFDLVYDTLGG------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp -EE-TTSCHHHHHHHHHTTSCEEEEEESSCT------HHHHHHHHHEEEEEEEEES
T ss_pred -ec-cCCCHHHHHHHHhcCCCceEEEECCCc------HHHHHHHHHHhcCCeEEEE
Confidence 22 222222333222 3579988754432 4678889999999988864
No 383
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=70.78 E-value=8.4 Score=36.52 Aligned_cols=37 Identities=19% Similarity=0.436 Sum_probs=29.1
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
+.+++|+=+|+ |..+..+++.++.++ .+|+++|.++.
T Consensus 166 l~g~~V~ViG~--G~iG~~~a~~a~~~G--a~V~~~d~~~~ 202 (377)
T 2vhw_A 166 VEPADVVVIGA--GTAGYNAARIANGMG--ATVTVLDINID 202 (377)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHHTT--CEEEEEESCHH
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHhCC--CEEEEEeCCHH
Confidence 46789999998 777777777766654 58999999764
No 384
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=70.46 E-value=15 Score=34.87 Aligned_cols=37 Identities=16% Similarity=0.022 Sum_probs=28.6
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhh
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGF 198 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~ 198 (327)
-+++|+-||.|..++-+.++ + -..+.++|.++...+.
T Consensus 3 ~~vidLFsG~GGlslG~~~a----G-~~~v~avE~d~~a~~t 39 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA----G-FDVKMAVEIDQHAINT 39 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH----T-CEEEEEECSCHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHC----C-CcEEEEEeCCHHHHHH
Confidence 47999999999999998875 2 2346799998765443
No 385
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=70.06 E-value=7.6 Score=35.85 Aligned_cols=32 Identities=0% Similarity=-0.219 Sum_probs=22.9
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
..+|+|+--... ..++.+++.|++||.++.--
T Consensus 232 ~g~D~vid~~g~------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 232 EQPRIFLDAVTG------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp HCCCEEEESSCH------HHHHHHHHHSCTTCEEEECC
T ss_pred CCCcEEEECCCC------hhHHHHHhhhcCCCEEEEEe
Confidence 368988654332 34578899999999888754
No 386
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=69.75 E-value=7.1 Score=37.47 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=24.4
Q ss_pred CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 249 GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 249 ~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+..+|+||--... ..++.+++.|++||.++.--
T Consensus 304 g~g~Dvvid~~G~------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 304 GREPDIVFEHTGR------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp SSCCSEEEECSCH------HHHHHHHHHSCTTCEEEESC
T ss_pred CCCceEEEECCCc------hHHHHHHHHHhcCCEEEEEe
Confidence 4578988754442 36788899999999888743
No 387
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=69.56 E-value=18 Score=35.32 Aligned_cols=128 Identities=14% Similarity=0.128 Sum_probs=67.8
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
+...-.+|.=||+ |+.+..+|..+.. +.+|+++|.+++..+...+.. ... -++. ++.+...+ ..+
T Consensus 32 r~~~~mkIaVIGl--G~mG~~lA~~La~---G~~V~~~D~~~~~v~~l~~g~-~~i--~e~~-----l~~ll~~~-~~~- 96 (432)
T 3pid_A 32 RGSEFMKITISGT--GYVGLSNGVLIAQ---NHEVVALDIVQAKVDMLNQKI-SPI--VDKE-----IQEYLAEK-PLN- 96 (432)
T ss_dssp ---CCCEEEEECC--SHHHHHHHHHHHT---TSEEEEECSCHHHHHHHHTTC-CSS--CCHH-----HHHHHHHS-CCC-
T ss_pred cccCCCEEEEECc--CHHHHHHHHHHHc---CCeEEEEecCHHHhhHHhccC-Ccc--cccc-----HHHHHhhc-cCC-
Confidence 3444568888887 7777777776542 689999999876554332211 000 0111 11111111 111
Q ss_pred cceEeeecchhhhhhhcCCcEeEEEEcCCCCC---------CcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHH
Q 041517 232 LPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF---------NSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVN 302 (327)
Q Consensus 232 ~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~---------~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~ 302 (327)
+.+.. +..+.+. ..|+|++-..-.. ..+...++.+.+ |+||.+||..--. .+|..+.+.
T Consensus 97 --l~~tt-d~~ea~~----~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv----~pgtt~~l~ 164 (432)
T 3pid_A 97 --FRATT-DKHDAYR----NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTI----PVGFTRDIK 164 (432)
T ss_dssp --EEEES-CHHHHHT----TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCC----CTTHHHHHH
T ss_pred --eEEEc-CHHHHHh----CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCC----ChHHHHHHH
Confidence 44432 2223332 3688887432211 135666778888 9999888753332 467666665
Q ss_pred HHHH
Q 041517 303 LFAK 306 (327)
Q Consensus 303 ~f~~ 306 (327)
+.+.
T Consensus 165 ~~l~ 168 (432)
T 3pid_A 165 ERLG 168 (432)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 5544
No 388
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=67.98 E-value=33 Score=32.27 Aligned_cols=117 Identities=9% Similarity=-0.061 Sum_probs=66.7
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|.=||+ |..+..||..+... +.+|+++|.+++..+ + +...|.
T Consensus 21 ~~mkIgiIGl--G~mG~~~A~~L~~~--G~~V~v~dr~~~~~~---~--------------------l~~~g~------- 66 (358)
T 4e21_A 21 QSMQIGMIGL--GRMGADMVRRLRKG--GHECVVYDLNVNAVQ---A--------------------LEREGI------- 66 (358)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSCHHHHH---H--------------------HHTTTC-------
T ss_pred cCCEEEEECc--hHHHHHHHHHHHhC--CCEEEEEeCCHHHHH---H--------------------HHHCCC-------
Confidence 3468889997 77777777766543 578999998754322 1 111121
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeEE
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v~ 313 (327)
.. ..+..+.+.. -...|+|++=.... .+...++.+.+.|++|.+||- ... ..++..+.+.+.+...|+.+.
T Consensus 67 ~~-~~s~~e~~~~-a~~~DvVi~~vp~~--~v~~vl~~l~~~l~~g~iiId--~st--~~~~~~~~~~~~l~~~g~~~v 137 (358)
T 4e21_A 67 AG-ARSIEEFCAK-LVKPRVVWLMVPAA--VVDSMLQRMTPLLAANDIVID--GGN--SHYQDDIRRADQMRAQGITYV 137 (358)
T ss_dssp BC-CSSHHHHHHH-SCSSCEEEECSCGG--GHHHHHHHHGGGCCTTCEEEE--CSS--CCHHHHHHHHHHHHTTTCEEE
T ss_pred EE-eCCHHHHHhc-CCCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEe--CCC--CChHHHHHHHHHHHHCCCEEE
Confidence 11 1122222222 12358888854332 566777888899999877653 322 235555555555566666543
No 389
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=67.96 E-value=17 Score=32.93 Aligned_cols=57 Identities=21% Similarity=0.249 Sum_probs=33.2
Q ss_pred CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCe
Q 041517 249 GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLK 311 (327)
Q Consensus 249 ~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~ 311 (327)
...||+|+||....... .+...+.+ .-+++|++-.... .....+.++++.+.+ .+.+
T Consensus 199 ~~~yD~VIIDtpp~~~~--~da~~l~~--~aD~vllVv~~~~-~~~~~~~~~~~~l~~-~g~~ 255 (286)
T 3la6_A 199 SKNYDLVLIDTPPILAV--TDAAIVGR--HVGTTLMVARYAV-NTLKEVETSLSRFEQ-NGIP 255 (286)
T ss_dssp HHHCSEEEEECCCTTTC--THHHHHTT--TCSEEEEEEETTT-SBHHHHHHHHHHHHH-TTCC
T ss_pred HhCCCEEEEcCCCCcch--HHHHHHHH--HCCeEEEEEeCCC-CcHHHHHHHHHHHHh-CCCC
Confidence 46899999998653322 12222222 2466777766665 344567777777644 4433
No 390
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=67.65 E-value=48 Score=27.19 Aligned_cols=54 Identities=13% Similarity=-0.061 Sum_probs=28.5
Q ss_pred hhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHH
Q 041517 245 LCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFA 305 (327)
Q Consensus 245 L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~ 305 (327)
+..+...||+|+||....... ....++.. -..+|+.-+... .. .++.+.++.+.
T Consensus 69 l~~l~~~yD~viiD~~~~~~~---~~~~~l~~--ad~viiv~~~~~-~~-~~~~~~~~~l~ 122 (206)
T 4dzz_A 69 IRKDLADYDFAIVDGAGSLSV---ITSAAVMV--SDLVIIPVTPSP-LD-FSAAGSVVTVL 122 (206)
T ss_dssp HHHHTTTSSEEEEECCSSSSH---HHHHHHHH--CSEEEEEECSCT-TT-HHHHHHHHHHH
T ss_pred HHHhcCCCCEEEEECCCCCCH---HHHHHHHH--CCEEEEEecCCH-HH-HHHHHHHHHHH
Confidence 334456799999997654432 22222221 345666655544 33 55655555553
No 391
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=67.63 E-value=68 Score=31.04 Aligned_cols=127 Identities=20% Similarity=0.117 Sum_probs=66.6
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|.=||+ |+.+..+|..+... +.+|+++|.+++..+...+.. ... ..+...+.+.+++.. + + +.+
T Consensus 3 mkI~VIG~--G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~-~~i--~e~gl~~~l~~~~~~-~---~---l~~ 68 (450)
T 3gg2_A 3 LDIAVVGI--GYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGT-IPI--YEPGLEKMIARNVKA-G---R---LRF 68 (450)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTC-SCC--CSTTHHHHHHHHHHT-T---S---EEE
T ss_pred CEEEEECc--CHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCC-Ccc--cCCCHHHHHHhhccc-C---c---EEE
Confidence 36777887 77777777765433 579999999876444222210 000 011111111112111 1 1 444
Q ss_pred eecchhhhhhhcCCcEeEEEEcCCCCCC--------cHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHH
Q 041517 237 SSGSALTKLCEWGVVGDLIEIDAGHDFN--------SAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAK 306 (327)
Q Consensus 237 ~~gda~~~L~~l~~~fDLIfIDa~h~~~--------~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~ 306 (327)
.. +..+.+. ..|+|++-...+.. .+...++.+.+.|++|.+|+..--. .+|..+.+.+...
T Consensus 69 t~-d~~ea~~----~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv----~pgt~~~l~~~l~ 137 (450)
T 3gg2_A 69 GT-EIEQAVP----EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTV----PVGSYRLIRKAIQ 137 (450)
T ss_dssp ES-CHHHHGG----GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC----CTTHHHHHHHHHH
T ss_pred EC-CHHHHHh----cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeC----CCcchHHHHHHHH
Confidence 32 2223232 36889886533211 4666778888889998877654432 3565554444443
No 392
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=67.46 E-value=56 Score=31.90 Aligned_cols=129 Identities=17% Similarity=0.172 Sum_probs=66.2
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccce
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPV 234 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V 234 (327)
+..+|.=||+ |+.+..+|..+... +.+|+++|.+++..+..++.. ... -.+.....+.+++. .+ + +
T Consensus 7 ~~~~I~VIG~--G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~-~~i--~e~gl~~~l~~~~~-~~---~---l 72 (478)
T 2y0c_A 7 GSMNLTIIGS--GSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGG-VPI--HEPGLKEVIARNRS-AG---R---L 72 (478)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTC-CSS--CCTTHHHHHHHHHH-TT---C---E
T ss_pred CCceEEEECc--CHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCC-CCc--CCCCHHHHHHHhcc-cC---C---E
Confidence 4568888998 66655555554322 578999999876544332211 000 00111111111211 11 1 4
Q ss_pred EeeecchhhhhhhcCCcEeEEEEcCCC--------CCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHH
Q 041517 235 PFSSGSALTKLCEWGVVGDLIEIDAGH--------DFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAK 306 (327)
Q Consensus 235 ~~~~gda~~~L~~l~~~fDLIfIDa~h--------~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~ 306 (327)
.+... ..+.+. ..|+||+--.- +...+...++.+.+.|++|.+|+.--.. .+|..+.+.+...
T Consensus 73 ~~ttd-~~~a~~----~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv----~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 73 RFSTD-IEAAVA----HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTV----PVGTAERVRAAVA 143 (478)
T ss_dssp EEECC-HHHHHH----HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC----CTTHHHHHHHHHH
T ss_pred EEECC-HHHHhh----cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCc----CCCchHHHHHHHH
Confidence 44332 222222 36888875432 1134566677788899998887653322 2565554544443
No 393
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=65.82 E-value=26 Score=32.20 Aligned_cols=33 Identities=18% Similarity=0.119 Sum_probs=22.1
Q ss_pred CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 249 GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 249 ~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+..+|+||--... .....+++.|++||.++.--
T Consensus 243 ~~g~Dvvid~~G~------~~~~~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 243 GGEAKLALNCVGG------KSSTGIARKLNNNGLMLTYG 275 (364)
T ss_dssp TCCEEEEEESSCH------HHHHHHHHTSCTTCEEEECC
T ss_pred CCCceEEEECCCc------hhHHHHHHHhccCCEEEEec
Confidence 3569998744332 22346789999999888643
No 394
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=65.82 E-value=13 Score=34.32 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=19.6
Q ss_pred CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEc
Q 041517 249 GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHD 287 (327)
Q Consensus 249 ~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD 287 (327)
+..+|+||--... ..++.+++.|++||.++.-.
T Consensus 206 ~~g~Dvv~d~~g~------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 206 AEGVDIVLDCLCG------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TTCEEEEEEECC-------------CTTEEEEEEEEEEC
T ss_pred CCCceEEEECCCc------hhHHHHHHHhhcCCEEEEEC
Confidence 3579988754332 12477899999999888643
No 395
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=65.65 E-value=31 Score=32.00 Aligned_cols=37 Identities=14% Similarity=-0.006 Sum_probs=29.1
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChh
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPG 197 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~ 197 (327)
..+++|+.||.|..++.+.++ + -..++++|.++...+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a----G-~~~v~~~e~d~~a~~ 47 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC----G-AECVYSNEWDKYAQE 47 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT----T-CEEEEEECCCHHHHH
T ss_pred CCcEEEECCCcCHHHHHHHHC----C-CeEEEEEeCCHHHHH
Confidence 468999999999999988874 3 345888999875444
No 396
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=65.56 E-value=6.1 Score=36.62 Aligned_cols=53 Identities=4% Similarity=-0.059 Sum_probs=41.4
Q ss_pred HHHHHHHhhc--CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhc
Q 041517 145 AVFGNLIDKV--RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFK 203 (327)
Q Consensus 145 ~lL~~L~~~~--~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~ 203 (327)
.+++.+++.. +...|||--||+|.+++...+. +.+.+++|+++.+.+.+++..
T Consensus 240 ~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~------gr~~ig~e~~~~~~~~~~~r~ 294 (323)
T 1boo_A 240 KLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERE------SRKWISFEMKPEYVAASAFRF 294 (323)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHGGG
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc------CCCEEEEeCCHHHHHHHHHHH
Confidence 4667776643 4578999999999988776653 789999999999888776643
No 397
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=64.84 E-value=19 Score=34.10 Aligned_cols=44 Identities=18% Similarity=0.306 Sum_probs=32.2
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhh
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~ 201 (327)
+.+.+|+=+|+ |..+..+++.++.++ .+|+.+|..+.-.+.+++
T Consensus 170 l~g~~V~ViGa--G~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 170 VPPARVLVFGV--GVAGLQAIATAKRLG--AVVMATDVRAATKEQVES 213 (384)
T ss_dssp ECCCEEEEECC--SHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHHH
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 35789999998 667777777666665 579999998875554443
No 398
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=64.47 E-value=6.1 Score=38.17 Aligned_cols=31 Identities=19% Similarity=0.187 Sum_probs=23.3
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
..+|+||--... ..++.+++.|++||.++.-
T Consensus 313 ~g~Dvvid~~G~------~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 313 EDIDIVFEHPGR------ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp CCEEEEEECSCH------HHHHHHHHHEEEEEEEEES
T ss_pred CCCcEEEEcCCc------hhHHHHHHHhhCCcEEEEE
Confidence 579987643321 4678899999999998874
No 399
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=64.22 E-value=6.6 Score=37.87 Aligned_cols=43 Identities=14% Similarity=0.016 Sum_probs=34.2
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCC---CCcEEEEEeCCCCChhhh
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLG---LDSQILCIDDFRGWPGFR 199 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~---~~~~V~~ID~~~~~~~~A 199 (327)
-.|+|+|.|+|..+.-+.+.++..+ ...+++.||+++...+..
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q 127 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQ 127 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHH
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHH
Confidence 4799999999999999988876432 356999999998766533
No 400
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=63.20 E-value=6.5 Score=37.05 Aligned_cols=37 Identities=19% Similarity=0.351 Sum_probs=28.6
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
+++++|+=+|+ |..+..+++.++.. +.+|+++|.++.
T Consensus 164 l~~~~V~ViGa--G~iG~~~a~~l~~~--Ga~V~~~d~~~~ 200 (369)
T 2eez_A 164 VAPASVVILGG--GTVGTNAAKIALGM--GAQVTILDVNHK 200 (369)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHHT--TCEEEEEESCHH
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHhC--CCEEEEEECCHH
Confidence 45789999998 67777777776655 469999998754
No 401
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=63.03 E-value=8.8 Score=35.80 Aligned_cols=56 Identities=18% Similarity=0.220 Sum_probs=38.0
Q ss_pred CcEeEEEEcCCCCCCcHH-H-----------HHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHH
Q 041517 250 VVGDLIEIDAGHDFNSAW-A-----------DINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKI 307 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~-~-----------dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~ 307 (327)
+++|+||+|..-.+-... + .++.+..+|+|||.+++--|.- ..+...+.+.++.+.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg--aDr~se~lv~~LaR~ 272 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY--ADRASESIIGAIARQ 272 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC--CSHHHHHHHHHHHTT
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC--CcccHHHHHHHHHHh
Confidence 679999999654332211 1 3577899999999999987765 234566666666553
No 402
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=62.98 E-value=20 Score=33.53 Aligned_cols=37 Identities=24% Similarity=0.382 Sum_probs=28.1
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
.++++|+=+|+ |..+..+++.++.++ .+|+.+|.++.
T Consensus 165 l~~~~VlViGa--GgvG~~aa~~a~~~G--a~V~v~dr~~~ 201 (361)
T 1pjc_A 165 VKPGKVVILGG--GVVGTEAAKMAVGLG--AQVQIFDINVE 201 (361)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHHTT--CEEEEEESCHH
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHhCC--CEEEEEeCCHH
Confidence 45789999998 666666666666565 48999999754
No 403
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=62.51 E-value=54 Score=29.41 Aligned_cols=111 Identities=14% Similarity=0.029 Sum_probs=66.1
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|.=||+ |..+..||..+... +.+|+++|.+++..+...+ .| +..
T Consensus 16 ~~I~vIG~--G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~-----------------------~g-------~~~ 61 (296)
T 3qha_A 16 LKLGYIGL--GNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAE-----------------------AG-------ATL 61 (296)
T ss_dssp CCEEEECC--STTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHH-----------------------TT-------CEE
T ss_pred CeEEEECc--CHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH-----------------------CC-------CEE
Confidence 57888887 77777777765433 5789999998865442211 11 111
Q ss_pred eecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 237 SSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 237 ~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
. .+..+ .-. .|+|++=... ...+...++.+.+.+++|.+|+-.-- ..++..+.+.+.+.+.|..+
T Consensus 62 ~-~~~~~----~~~-aDvvi~~vp~-~~~~~~v~~~l~~~l~~g~ivv~~st----~~~~~~~~~~~~~~~~g~~~ 126 (296)
T 3qha_A 62 A-DSVAD----VAA-ADLIHITVLD-DAQVREVVGELAGHAKPGTVIAIHST----ISDTTAVELARDLKARDIHI 126 (296)
T ss_dssp C-SSHHH----HTT-SSEEEECCSS-HHHHHHHHHHHHTTCCTTCEEEECSC----CCHHHHHHHHHHHGGGTCEE
T ss_pred c-CCHHH----HHh-CCEEEEECCC-hHHHHHHHHHHHHhcCCCCEEEEeCC----CCHHHHHHHHHHHHHcCCEE
Confidence 1 11122 123 6888875432 22344566788888999887654322 24666666666666666554
No 404
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=62.42 E-value=18 Score=32.90 Aligned_cols=31 Identities=16% Similarity=-0.004 Sum_probs=22.5
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
..+|+||--... ..++.+++.|++||.++.-
T Consensus 214 ~g~D~v~d~~g~------~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 214 TPVDAVIDLVGG------DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp SCEEEEEESSCH------HHHHHHGGGEEEEEEEEEC
T ss_pred cCCCEEEECCCc------HHHHHHHHhccCCCEEEEe
Confidence 468987653332 3448899999999988864
No 405
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=62.23 E-value=36 Score=30.85 Aligned_cols=58 Identities=14% Similarity=0.125 Sum_probs=34.2
Q ss_pred cCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCe
Q 041517 248 WGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLK 311 (327)
Q Consensus 248 l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~ 311 (327)
+...||+|+||+...... .+...+.+ .-+++|++-.... .....+.++++.+.+ .+.+
T Consensus 210 l~~~yD~VIIDtpp~~~~--~d~~~l~~--~ad~vilV~~~~~-~~~~~~~~~~~~l~~-~~~~ 267 (299)
T 3cio_A 210 ANDHYDLVIVDTPPMLAV--SDAAVVGR--SVGTSLLVARFGL-NTAKEVSLSMQRLEQ-AGVN 267 (299)
T ss_dssp HHHHCSEEEEECCCTTTC--THHHHHGG--GCSEEEEEEETTT-SCTTHHHHHHHHHHH-TTCC
T ss_pred HHhCCCEEEEcCCCCchh--HHHHHHHH--HCCEEEEEEcCCC-ChHHHHHHHHHHHHh-CCCC
Confidence 346899999998754322 12222222 2467777666554 345678888877754 4544
No 406
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=61.84 E-value=11 Score=36.27 Aligned_cols=43 Identities=16% Similarity=0.224 Sum_probs=31.2
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~ 201 (327)
++.+|+=||+ |..+..+++.+++++ .+|+.+|.++.-.+.+++
T Consensus 183 ~~~kV~ViG~--G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGV--GVAGLQALATAKRLG--AKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESC--SHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECc--hHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 5789999999 666666666665554 689999998765544433
No 407
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=61.37 E-value=57 Score=25.93 Aligned_cols=39 Identities=18% Similarity=0.217 Sum_probs=29.8
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCCh
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWP 196 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~ 196 (327)
....+|+=+|+ |..+..+++.++.. +.+|+.+|.++...
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~--g~~V~vid~~~~~~ 55 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSS--GHSVVVVDKNEYAF 55 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHT--TCEEEEEESCGGGG
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhC--CCeEEEEECCHHHH
Confidence 34678999997 88888888876554 46899999976544
No 408
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=61.00 E-value=22 Score=31.42 Aligned_cols=36 Identities=22% Similarity=0.182 Sum_probs=24.7
Q ss_pred EEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCC
Q 041517 158 VIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGW 195 (327)
Q Consensus 158 ~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~ 195 (327)
+|.=||+ |..+..+|..+...+...+|+++|.++..
T Consensus 3 ~I~iIG~--G~mG~~~a~~l~~~g~~~~V~~~d~~~~~ 38 (281)
T 2g5c_A 3 NVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPES 38 (281)
T ss_dssp EEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred EEEEEec--CHHHHHHHHHHHhcCCCcEEEEEeCCHHH
Confidence 5777887 77777777766544433389999987543
No 409
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=60.68 E-value=9.9 Score=36.17 Aligned_cols=126 Identities=16% Similarity=0.163 Sum_probs=76.6
Q ss_pred cCCchHHHHHHHHHhhcC--CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHH
Q 041517 138 KGWGSYGAVFGNLIDKVR--PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLY 215 (327)
Q Consensus 138 ~gw~~~g~lL~~L~~~~~--p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~ 215 (327)
.|+++ ..-+.|++.+. .++||-++-..|..+++++. ..+++++..+. +.+ +
T Consensus 28 ~~~~~--~~~~~l~~~~~~~~~~~l~~n~~~g~~~~~~~~-------~~~~~~~~~~~--~~~--~-------------- 80 (381)
T 3dmg_A 28 RGYRD--PVHDLLQKTVEPFGERALDLNPGVGWGSLPLEG-------RMAVERLETSR--AAF--R-------------- 80 (381)
T ss_dssp SSSSC--HHHHHHHTTCCCCSSEEEESSCTTSTTTGGGBT-------TBEEEEEECBH--HHH--H--------------
T ss_pred CCCCC--hHHHHHHHHHHHhCCcEEEecCCCCccccccCC-------CCceEEEeCcH--HHH--H--------------
Confidence 45544 23344555442 47899999999987777653 46778775432 110 0
Q ss_pred HHHHHHHhhhccCCcccceEeeecchhhhhhhcCCcEeEEEEcCCCCC--CcHHHHHHHHHccCCCCeEEEEEcCCCCCC
Q 041517 216 FQFLQNVIYQNAIDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHDF--NSAWADINRAWRILRPGGVIFGHDYFTAAD 293 (327)
Q Consensus 216 ~~Fl~nv~~~g~~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~--~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~ 293 (327)
.+...|+. ... ..+ +......||+|.+-.-+.. .....-|..+...|+|||.|++..-..
T Consensus 81 -----~l~~~~~~-----~~~--~~~---~~~~~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~--- 142 (381)
T 3dmg_A 81 -----CLTASGLQ-----ARL--ALP---WEAAAGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDKN--- 142 (381)
T ss_dssp -----HHHHTTCC-----CEE--CCG---GGSCTTCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEGG---
T ss_pred -----HHHHcCCC-----ccc--cCC---ccCCcCCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEccH---
Confidence 12233432 111 111 1223468999999887632 234456788889999999887755443
Q ss_pred chhHHHHHHHHHHHcC
Q 041517 294 NRGVRRAVNLFAKING 309 (327)
Q Consensus 294 ~~GV~~Av~~f~~~~g 309 (327)
.|++++...+....+
T Consensus 143 -~g~~~~~~~~~~~~~ 157 (381)
T 3dmg_A 143 -KGFERYFKEARALLG 157 (381)
T ss_dssp -GTHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHHhhhc
Confidence 589999888876543
No 410
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=59.04 E-value=11 Score=35.03 Aligned_cols=52 Identities=13% Similarity=0.128 Sum_probs=41.0
Q ss_pred HHHHHHHHhhc--CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC---CChhhhhh
Q 041517 144 GAVFGNLIDKV--RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR---GWPGFRDK 201 (327)
Q Consensus 144 g~lL~~L~~~~--~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~---~~~~~A~~ 201 (327)
..+++.+++.. +...|||-=||+|.+++...+. +.+.++||+++ ...+.+++
T Consensus 229 ~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~------~r~~ig~e~~~~~~~~~~~~~~ 285 (319)
T 1eg2_A 229 AAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQE------GRNSICTDAAPVFKEYYQKQLT 285 (319)
T ss_dssp HHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHH------TCEEEEEESSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHc------CCcEEEEECCccHHHHHHHHHH
Confidence 35677776543 4579999999999998887764 78999999999 87777655
No 411
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=58.52 E-value=27 Score=32.51 Aligned_cols=39 Identities=15% Similarity=0.058 Sum_probs=30.4
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCCh
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWP 196 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~ 196 (327)
+..++|.=||. |..+..+|+.+++. +.+|+++|.++...
T Consensus 143 l~g~tvGIIG~--G~IG~~vA~~l~~~--G~~V~~~d~~~~~~ 181 (330)
T 4e5n_A 143 LDNATVGFLGM--GAIGLAMADRLQGW--GATLQYHEAKALDT 181 (330)
T ss_dssp STTCEEEEECC--SHHHHHHHHHTTTS--CCEEEEECSSCCCH
T ss_pred cCCCEEEEEee--CHHHHHHHHHHHHC--CCEEEEECCCCCcH
Confidence 45678999998 88888889886644 67999999987433
No 412
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=58.36 E-value=17 Score=36.97 Aligned_cols=57 Identities=25% Similarity=0.295 Sum_probs=39.5
Q ss_pred CcEeEEEEcCCCCC--CcHHHHH----------HHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHc
Q 041517 250 VVGDLIEIDAGHDF--NSAWADI----------NRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKIN 308 (327)
Q Consensus 250 ~~fDLIfIDa~h~~--~~v~~dl----------~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~ 308 (327)
++||+||||..-+| ++..+.- ..++.+|+|||.+++--|... .+--...|..+++..
T Consensus 220 ~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyA--Dr~sE~vv~alaRkF 288 (670)
T 4gua_A 220 ARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYA--DRNSEDVVTALARKF 288 (670)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC--SHHHHHHHHHHHHTE
T ss_pred CcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeecc--ccchHHHHHHHHhhe
Confidence 58999999977553 2222222 346789999999999999873 355556666666643
No 413
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=57.72 E-value=26 Score=34.30 Aligned_cols=38 Identities=13% Similarity=-0.027 Sum_probs=27.2
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChh
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPG 197 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~ 197 (327)
-.+|-=||+ ||-++.+|.++.. .+.+|+|+|+++.-.+
T Consensus 21 m~~IaViGl--GYVGLp~A~~~A~--~G~~V~g~Did~~kV~ 58 (444)
T 3vtf_A 21 MASLSVLGL--GYVGVVHAVGFAL--LGHRVVGYDVNPSIVE 58 (444)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHH--HTCEEEEECSCHHHHH
T ss_pred CCEEEEEcc--CHHHHHHHHHHHh--CCCcEEEEECCHHHHH
Confidence 357888988 7777766665432 2689999999876544
No 414
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=57.47 E-value=24 Score=32.59 Aligned_cols=111 Identities=9% Similarity=-0.017 Sum_probs=57.4
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCc--cc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDS--VL 232 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~--v~ 232 (327)
.++.||.+|| |.-|...-. ..+.+.+++=|| .+...++.++. +.+... ...++ .+
T Consensus 102 g~~QvV~LGa--GlDTra~Rl---~~~~~~~v~evD-~P~vi~~k~~l----------------L~~~~~-~~~~~~~~v 158 (310)
T 2uyo_A 102 GIRQFVILAS--GLDSRAYRL---DWPTGTTVYEID-QPKVLAYKSTT----------------LAEHGV-TPTADRREV 158 (310)
T ss_dssp TCCEEEEETC--TTCCHHHHS---CCCTTCEEEEEE-CHHHHHHHHHH----------------HHHTTC-CCSSEEEEE
T ss_pred CCCeEEEeCC--CCCchhhhc---cCCCCcEEEEcC-CHHHHHHHHHH----------------HHhcCC-CCCCCeEEE
Confidence 4678999999 444443221 123357899999 46555544331 111100 01111 11
Q ss_pred ceEeeecchhhhhhh--c--CCcEeEEEEcCCCCC---CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 233 PVPFSSGSALTKLCE--W--GVVGDLIEIDAGHDF---NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 233 ~V~~~~gda~~~L~~--l--~~~fDLIfIDa~h~~---~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
++.+.. +-.+.+.. + +.+. ++..-|-..| +.+..-++.+...+.||+.|+++.+..
T Consensus 159 ~~Dl~d-~~~~~l~~~g~d~~~Pt-~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 159 PIDLRQ-DWPPALRSAGFDPSART-AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp ECCTTS-CHHHHHHHTTCCTTSCE-EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred ecchHh-hHHHHHHhccCCCCCCE-EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 222222 21222222 1 1333 5556665444 234455677777788999999998875
No 415
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=57.43 E-value=43 Score=30.08 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=28.8
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR 193 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~ 193 (327)
.+..++|+=||+ |..+..+|+.++..+ .+|+.+|.++
T Consensus 152 ~l~g~~v~IiG~--G~iG~~~a~~l~~~G--~~V~~~dr~~ 188 (293)
T 3d4o_A 152 TIHGANVAVLGL--GRVGMSVARKFAALG--AKVKVGARES 188 (293)
T ss_dssp CSTTCEEEEECC--SHHHHHHHHHHHHTT--CEEEEEESSH
T ss_pred CCCCCEEEEEee--CHHHHHHHHHHHhCC--CEEEEEECCH
Confidence 345789999997 778888888776554 5999999865
No 416
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=55.84 E-value=27 Score=32.49 Aligned_cols=49 Identities=16% Similarity=0.202 Sum_probs=39.1
Q ss_pred HHHHHHhh--cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 146 VFGNLIDK--VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 146 lL~~L~~~--~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
||..+.+. .++..|+=||||.|.....+++....++...+.++||+.+.
T Consensus 49 FLt~~~~~~~~~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 49 FLSKLQRHGILDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp HHHHHHHTTCSTTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred HHHHHHhcCCCCCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 44444432 23679999999999999999998877778899999999654
No 417
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=55.84 E-value=12 Score=35.84 Aligned_cols=42 Identities=19% Similarity=0.287 Sum_probs=31.0
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhh
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFR 199 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A 199 (327)
+.+.+|+=+|+ |..+..+++.++.++ .+|+.+|..+.-.+.+
T Consensus 170 l~g~~V~ViGa--G~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 170 VPPAKVMVIGA--GVAGLAAIGAANSLG--AIVRAFDTRPEVKEQV 211 (401)
T ss_dssp ECCCEEEEECC--SHHHHHHHHHHHHTT--CEEEEECSCGGGHHHH
T ss_pred cCCCEEEEECC--CHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHH
Confidence 45789999998 667777777666665 5899999987654433
No 418
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=55.37 E-value=24 Score=28.94 Aligned_cols=36 Identities=14% Similarity=0.005 Sum_probs=26.9
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
..+|+=||+ |..+..+++.++... +.+|+++|.+++
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~-g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARY-GKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHH-CSCEEEEESCHH
T ss_pred CCcEEEECC--CHHHHHHHHHHHhcc-CCeEEEEECCHH
Confidence 357888886 888888888765430 468999999764
No 419
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=55.24 E-value=31 Score=30.57 Aligned_cols=37 Identities=14% Similarity=0.045 Sum_probs=25.5
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
..+|.=||+ |..+..+|..+...+.+.+|+++|.+++
T Consensus 6 ~~~I~iIG~--G~mG~~~a~~l~~~g~~~~V~~~d~~~~ 42 (290)
T 3b1f_A 6 EKTIYIAGL--GLIGASLALGIKRDHPHYKIVGYNRSDR 42 (290)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHHCTTSEEEEECSSHH
T ss_pred cceEEEEee--CHHHHHHHHHHHhCCCCcEEEEEcCCHH
Confidence 357888997 6666666666544444578999998654
No 420
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=55.16 E-value=24 Score=34.07 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=31.9
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~ 201 (327)
.+.+|+=||+ |..+..+++.++.+ +.+|+.+|.++.-.+.+++
T Consensus 189 ~~~kV~ViG~--G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGA--GVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECC--cHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 5789999999 66667777666556 4689999999875554443
No 421
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=53.14 E-value=1.7e+02 Score=28.56 Aligned_cols=120 Identities=13% Similarity=0.130 Sum_probs=61.0
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCc-EEEEEeCCCC----ChhhhhhhcccCccccchHHHHHHHHHHhhhcc
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDS-QILCIDDFRG----WPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNA 227 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~-~V~~ID~~~~----~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~ 227 (327)
...-.+|.=||+ |+.+..||..+... ++. +|+++|.+++ -.+..++-. .......+.+. .+++.....+
T Consensus 15 ~~~~mkIaVIGl--G~mG~~lA~~la~~-~G~~~V~~~D~~~~~~~~kv~~l~~g~-~~i~~~e~gl~-~l~~~~~~~g- 88 (478)
T 3g79_A 15 RGPIKKIGVLGM--GYVGIPAAVLFADA-PCFEKVLGFQRNSKSSGYKIEMLNRGE-SPLKGEEPGLE-ELIGKVVKAG- 88 (478)
T ss_dssp HCSCCEEEEECC--STTHHHHHHHHHHS-TTCCEEEEECCCCTTTTTHHHHHTTTC-CCSSCCGGGHH-HHHHHHHHTT-
T ss_pred cCCCCEEEEECc--CHHHHHHHHHHHHh-CCCCeEEEEECChhHhHHHHHHHHhcC-CCccccCCCHH-HHHHhhcccC-
Confidence 344568888988 55555555544333 146 8999999987 433222110 00000011111 1111111112
Q ss_pred CCcccceEeeecchhhhhhhcCCcEeEEEEcCCCC----------CCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 228 IDSVLPVPFSSGSALTKLCEWGVVGDLIEIDAGHD----------FNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 228 ~~~v~~V~~~~gda~~~L~~l~~~fDLIfIDa~h~----------~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+ +.+... .+.+. ..|+|++-..-+ -..+....+.+.+.|++|.+||..-..
T Consensus 89 --~---l~~ttd--~ea~~----~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv 149 (478)
T 3g79_A 89 --K---FECTPD--FSRIS----ELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTI 149 (478)
T ss_dssp --C---EEEESC--GGGGG----GCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCC
T ss_pred --C---eEEeCc--HHHHh----cCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCC
Confidence 2 555443 23332 368888753221 123556678888999999987755433
No 422
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=53.08 E-value=98 Score=29.83 Aligned_cols=39 Identities=10% Similarity=0.124 Sum_probs=26.9
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChh
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPG 197 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~ 197 (327)
.+|.=||+ |+.+..+|..+...+++.+|+++|.+++..+
T Consensus 6 mkI~VIG~--G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~ 44 (467)
T 2q3e_A 6 KKICCIGA--GYVGGPTCSVIAHMCPEIRVTVVDVNESRIN 44 (467)
T ss_dssp CEEEEECC--STTHHHHHHHHHHHCTTSEEEEECSCHHHHH
T ss_pred cEEEEECC--CHHHHHHHHHHHhcCCCCEEEEEECCHHHHH
Confidence 47888887 6666666665544444678999999865443
No 423
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=52.89 E-value=38 Score=30.20 Aligned_cols=59 Identities=15% Similarity=0.157 Sum_probs=33.9
Q ss_pred cCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 248 WGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 248 l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
+...||+|+||+...... .+...+.+ .-+++|++-.... ....++.++++.+. ..+.++
T Consensus 188 l~~~yD~VIIDtpp~~~~--~d~~~l~~--~aD~vilVv~~~~-~~~~~~~~~~~~l~-~~~~~~ 246 (271)
T 3bfv_A 188 LLMNYNFVIIDTPPVNTV--TDAQLFSK--FTGNVVYVVNSEN-NNKDEVKKGKELIE-ATGAKL 246 (271)
T ss_dssp HHHHCSEEEEECCCTTTC--SHHHHHHH--HHCEEEEEEETTS-CCHHHHHHHHHHHH-TTTCEE
T ss_pred HHhCCCEEEEeCCCCchH--HHHHHHHH--HCCEEEEEEeCCC-CcHHHHHHHHHHHH-hCCCCE
Confidence 346799999998753322 12222222 1257777766665 34566777776664 345554
No 424
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=51.61 E-value=26 Score=34.73 Aligned_cols=38 Identities=11% Similarity=0.067 Sum_probs=29.8
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCC
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGW 195 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~ 195 (327)
...++|+=||+ |..+..+|+.++..+ .+|+++|.++.-
T Consensus 272 l~GktV~IiG~--G~IG~~~A~~lka~G--a~Viv~d~~~~~ 309 (494)
T 3ce6_A 272 IGGKKVLICGY--GDVGKGCAEAMKGQG--ARVSVTEIDPIN 309 (494)
T ss_dssp CTTCEEEEECC--SHHHHHHHHHHHHTT--CEEEEECSCHHH
T ss_pred CCcCEEEEEcc--CHHHHHHHHHHHHCC--CEEEEEeCCHHH
Confidence 45689999997 778888888777654 699999997643
No 425
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=51.52 E-value=51 Score=30.65 Aligned_cols=39 Identities=10% Similarity=-0.028 Sum_probs=28.3
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChh
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPG 197 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~ 197 (327)
.+...||.+|||....+..+... .++.+++-||. ++..+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~----~~~~~~~EvD~-P~vi~ 134 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQM----FPHLAYVDIDY-NESVE 134 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHH----CTTEEEEEEEC-HHHHH
T ss_pred CCCcEEEEeCCCCccHHHHhcCc----CCCCEEEECCC-HHHHH
Confidence 45678999999999888888763 23667777777 44443
No 426
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=51.34 E-value=57 Score=27.58 Aligned_cols=34 Identities=21% Similarity=0.093 Sum_probs=20.6
Q ss_pred cchHHH--HHHHHHhccCCCCcEEEEEeCCCCChhhh
Q 041517 165 FLGASA--LHMANLTRQLGLDSQILCIDDFRGWPGFR 199 (327)
Q Consensus 165 ~~G~Sa--l~lA~a~r~l~~~~~V~~ID~~~~~~~~A 199 (327)
|.|.|+ ..+|.++... .+.+|..||.++......
T Consensus 15 GvGKTt~a~~LA~~la~~-~g~~VlliD~D~~~~~l~ 50 (245)
T 3ea0_A 15 GDGGSCIAANFAFALSQE-PDIHVLAVDISLPFGDLD 50 (245)
T ss_dssp TSSHHHHHHHHHHHHTTS-TTCCEEEEECCTTTCCGG
T ss_pred CcchHHHHHHHHHHHHhC-cCCCEEEEECCCCCCCHH
Confidence 445554 4466654322 278999999998744433
No 427
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=48.97 E-value=15 Score=35.17 Aligned_cols=46 Identities=13% Similarity=0.097 Sum_probs=34.1
Q ss_pred HHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCCh
Q 041517 147 FGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWP 196 (327)
Q Consensus 147 L~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~ 196 (327)
+..+....++++|+=||. |+.++.+|..++.+ +.+|+.++..+...
T Consensus 138 l~~~~~~~~~~~vvViGg--G~ig~E~A~~l~~~--g~~Vtlv~~~~~ll 183 (437)
T 4eqs_A 138 IDQFIKANQVDKVLVVGA--GYVSLEVLENLYER--GLHPTLIHRSDKIN 183 (437)
T ss_dssp HHHHHHHHTCCEEEEECC--SHHHHHHHHHHHHH--TCEEEEEESSSCCS
T ss_pred HHHhhhccCCcEEEEECC--ccchhhhHHHHHhc--CCcceeeeeecccc
Confidence 344444556889998887 89999999887765 57899998876543
No 428
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=48.64 E-value=19 Score=34.62 Aligned_cols=93 Identities=13% Similarity=0.027 Sum_probs=54.6
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|+=||+ |..+..+++.++.. +..|+.||.+++..+.+++ .| +..
T Consensus 5 ~~viIiG~--Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~-----------------------~g-------~~v 50 (413)
T 3l9w_A 5 MRVIIAGF--GRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRK-----------------------FG-------MKV 50 (413)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHH-----------------------TT-------CCC
T ss_pred CeEEEECC--CHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHh-----------------------CC-------CeE
Confidence 46888887 88888888877643 6789999998765543322 11 223
Q ss_pred eecchh--hhhhhcC-CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEE
Q 041517 237 SSGSAL--TKLCEWG-VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 237 ~~gda~--~~L~~l~-~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
..||+. +.|...+ ...|+|++-.+. ...-..+-...+.+.|...|+.
T Consensus 51 i~GDat~~~~L~~agi~~A~~viv~~~~--~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 51 FYGDATRMDLLESAGAAKAEVLINAIDD--PQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp EESCTTCHHHHHHTTTTTCSEEEECCSS--HHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEcCCCCHHHHHhcCCCccCEEEECCCC--hHHHHHHHHHHHHhCCCCeEEE
Confidence 344433 2343332 467777775443 2222334455666777765554
No 429
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=48.30 E-value=49 Score=31.07 Aligned_cols=42 Identities=17% Similarity=0.263 Sum_probs=32.1
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhh
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGF 198 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~ 198 (327)
.+..++|.=||. |..+..+|+.++.. +.+|+++|..+...+.
T Consensus 161 ~l~gktvGIIG~--G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~ 202 (351)
T 3jtm_A 161 DLEGKTIGTVGA--GRIGKLLLQRLKPF--GCNLLYHDRLQMAPEL 202 (351)
T ss_dssp CSTTCEEEEECC--SHHHHHHHHHHGGG--CCEEEEECSSCCCHHH
T ss_pred cccCCEEeEEEe--CHHHHHHHHHHHHC--CCEEEEeCCCccCHHH
Confidence 345789999998 78888888887655 5789999987654443
No 430
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=48.19 E-value=31 Score=31.38 Aligned_cols=104 Identities=11% Similarity=-0.064 Sum_probs=53.2
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|.=||+ |..+..+|..+... +.+|+.+|.+++..+..++.... .+...+.... ..+..
T Consensus 5 mki~iiG~--G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~~~-~~~~~ 64 (359)
T 1bg6_A 5 KTYAVLGL--GNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAI---------------IAEGPGLAGT-AHPDL 64 (359)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSE---------------EEESSSCCEE-ECCSE
T ss_pred CeEEEECC--CHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCe---------------EEeccccccc-cccce
Confidence 57889998 56666666654432 56899999865433221110000 0000000000 00101
Q ss_pred eecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 237 SSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 237 ~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
...+..+.+ ..+|+|++=... ......++.+.+.+++|.+|+..
T Consensus 65 ~~~~~~~~~----~~~D~vi~~v~~--~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 65 LTSDIGLAV----KDADVILIVVPA--IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EESCHHHHH----TTCSEEEECSCG--GGHHHHHHHHGGGCCTTCEEEES
T ss_pred ecCCHHHHH----hcCCEEEEeCCc--hHHHHHHHHHHHhCCCCCEEEEc
Confidence 112222222 358999986543 23346678888889998876654
No 431
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=48.18 E-value=69 Score=29.34 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=22.3
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcE-EEEEeCCCC
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQ-ILCIDDFRG 194 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~-V~~ID~~~~ 194 (327)
...+||=+|. +.|..++.+|+. + +.+ +.+++..+.
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~---~--Ga~vi~~~~~~~~ 204 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAA---L--GLRTINVVRDRPD 204 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH---H--TCEEEEEECCCSC
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHH---c--CCEEEEEecCccc
Confidence 4578999996 566777777775 3 344 445555443
No 432
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=48.10 E-value=59 Score=24.65 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=25.7
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
.+|+=+|+ |..+..+++.+... +.+|+.+|.+++
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~--g~~v~~~d~~~~ 38 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEK--GHDIVLIDIDKD 38 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHT--TCEEEEEESCHH
T ss_pred CEEEEECC--CHHHHHHHHHHHhC--CCeEEEEECCHH
Confidence 46888887 88888888876543 578999998653
No 433
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=47.99 E-value=39 Score=31.14 Aligned_cols=43 Identities=12% Similarity=0.129 Sum_probs=26.2
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhh
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRD 200 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~ 200 (327)
...+||=+|+ |..++..++.++.++ +.+|+++|.++.-.+.++
T Consensus 186 ~g~~VlV~Ga--G~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~ 228 (359)
T 1h2b_A 186 PGAYVAIVGV--GGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAE 228 (359)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECC--CHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHH
Confidence 4578999998 334444444444441 458999998765444443
No 434
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=47.75 E-value=77 Score=28.43 Aligned_cols=37 Identities=11% Similarity=0.159 Sum_probs=28.9
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR 193 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~ 193 (327)
.+..++|+=||+ |..+..+|+.++.. +.+|+.+|.++
T Consensus 154 ~l~g~~v~IiG~--G~iG~~~a~~l~~~--G~~V~~~d~~~ 190 (300)
T 2rir_A 154 TIHGSQVAVLGL--GRTGMTIARTFAAL--GANVKVGARSS 190 (300)
T ss_dssp CSTTSEEEEECC--SHHHHHHHHHHHHT--TCEEEEEESSH
T ss_pred CCCCCEEEEEcc--cHHHHHHHHHHHHC--CCEEEEEECCH
Confidence 346789999998 77888888877655 46999999865
No 435
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=47.74 E-value=1.5e+02 Score=26.13 Aligned_cols=112 Identities=6% Similarity=-0.101 Sum_probs=61.1
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|.=||+ |..+..||+.+... +.+|+.+|.+++..+...+ .+ +..
T Consensus 2 ~~i~iIG~--G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~-----------------------~g-------~~~ 47 (287)
T 3pef_A 2 QKFGFIGL--GIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAA-----------------------LG-------AER 47 (287)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHH-----------------------TT-------CEE
T ss_pred CEEEEEee--cHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHH-----------------------CC-------Cee
Confidence 46777888 77777777766543 5789999997654432111 11 111
Q ss_pred eecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHH---HHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 237 SSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADI---NRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 237 ~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl---~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
..+..+.+. ..|+|++=... ...+...+ +.+.+.+++|.+|+-. . ...++..+.+.+...+.|..+
T Consensus 48 -~~~~~~~~~----~aDvvi~~vp~-~~~~~~v~~~~~~l~~~l~~~~~vi~~--s--t~~~~~~~~~~~~~~~~g~~~ 116 (287)
T 3pef_A 48 -AATPCEVVE----SCPVTFAMLAD-PAAAEEVCFGKHGVLEGIGEGRGYVDM--S--TVDPATSQRIGVAVVAKGGRF 116 (287)
T ss_dssp -CSSHHHHHH----HCSEEEECCSS-HHHHHHHHHSTTCHHHHCCTTCEEEEC--S--CCCHHHHHHHHHHHHHTTCEE
T ss_pred -cCCHHHHHh----cCCEEEEEcCC-HHHHHHHHcCcchHhhcCCCCCEEEeC--C--CCCHHHHHHHHHHHHHhCCEE
Confidence 112222222 25888874431 12233344 5556778888766532 2 123565566666666666554
No 436
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=46.69 E-value=82 Score=26.52 Aligned_cols=30 Identities=20% Similarity=0.157 Sum_probs=18.9
Q ss_pred cCcchHHHHHHHHHhccCCCCcEEEEEeCCCCC
Q 041517 163 GSFLGASALHMANLTRQLGLDSQILCIDDFRGW 195 (327)
Q Consensus 163 Gt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~ 195 (327)
|+|.=..+..+|.++.. .+ +|..||.++..
T Consensus 11 GvGKTT~a~~LA~~la~--~g-~VlliD~D~q~ 40 (209)
T 3cwq_A 11 GVGKTTTAVHLSAYLAL--QG-ETLLIDGDPNR 40 (209)
T ss_dssp TSSHHHHHHHHHHHHHT--TS-CEEEEEECTTC
T ss_pred CCcHHHHHHHHHHHHHh--cC-CEEEEECCCCC
Confidence 44444445566666543 25 99999998763
No 437
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=43.72 E-value=66 Score=30.76 Aligned_cols=41 Identities=15% Similarity=0.110 Sum_probs=31.4
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChh
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPG 197 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~ 197 (327)
.+..++|.=||+ |..+..+|+.++.. +.+|+++|.++...+
T Consensus 188 ~l~gktvGIIGl--G~IG~~vA~~l~a~--G~~V~~~d~~~~~~~ 228 (393)
T 2nac_A 188 DLEAMHVGTVAA--GRIGLAVLRRLAPF--DVHLHYTDRHRLPES 228 (393)
T ss_dssp CCTTCEEEEECC--SHHHHHHHHHHGGG--TCEEEEECSSCCCHH
T ss_pred cCCCCEEEEEeE--CHHHHHHHHHHHhC--CCEEEEEcCCccchh
Confidence 345678988988 88888888887654 589999999865443
No 438
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=43.41 E-value=56 Score=30.40 Aligned_cols=38 Identities=11% Similarity=0.154 Sum_probs=29.6
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
.+..++|.=||. |..+..+|+.++.. +.+|+++|.++.
T Consensus 162 ~l~g~tvgIIGl--G~IG~~vA~~l~~~--G~~V~~~d~~~~ 199 (335)
T 2g76_A 162 ELNGKTLGILGL--GRIGREVATRMQSF--GMKTIGYDPIIS 199 (335)
T ss_dssp CCTTCEEEEECC--SHHHHHHHHHHHTT--TCEEEEECSSSC
T ss_pred CCCcCEEEEEeE--CHHHHHHHHHHHHC--CCEEEEECCCcc
Confidence 345678999988 88888888877644 689999998754
No 439
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=43.37 E-value=1e+02 Score=28.33 Aligned_cols=40 Identities=18% Similarity=-0.072 Sum_probs=25.2
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhh
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFR 199 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A 199 (327)
-++|.=||+ |..+..||..+... +.+|+.+|.+++..+.+
T Consensus 6 ~~kI~vIGa--G~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~ 45 (319)
T 2dpo_A 6 AGDVLIVGS--GLVGRSWAMLFASG--GFRVKLYDIEPRQITGA 45 (319)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHT--TCCEEEECSCHHHHHHH
T ss_pred CceEEEEee--CHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 357888888 44444444443222 56899999988765544
No 440
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=43.34 E-value=1.8e+02 Score=25.99 Aligned_cols=37 Identities=8% Similarity=-0.156 Sum_probs=27.3
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCCh
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWP 196 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~ 196 (327)
..+|.=||+ |..+..||+.+... +.+|+++|.+++..
T Consensus 21 m~~I~iIG~--G~mG~~~A~~l~~~--G~~V~~~dr~~~~~ 57 (310)
T 3doj_A 21 MMEVGFLGL--GIMGKAMSMNLLKN--GFKVTVWNRTLSKC 57 (310)
T ss_dssp SCEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSSGGGG
T ss_pred CCEEEEECc--cHHHHHHHHHHHHC--CCeEEEEeCCHHHH
Confidence 468888988 77777777766543 56899999976543
No 441
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=43.05 E-value=40 Score=30.83 Aligned_cols=38 Identities=21% Similarity=0.354 Sum_probs=29.9
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
.+..++|.=||+ |..+..+|+.++.. +.+|+++|.++.
T Consensus 139 ~l~g~~vgIiG~--G~IG~~~A~~l~~~--G~~V~~~d~~~~ 176 (307)
T 1wwk_A 139 ELEGKTIGIIGF--GRIGYQVAKIANAL--GMNILLYDPYPN 176 (307)
T ss_dssp CCTTCEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSSCC
T ss_pred ccCCceEEEEcc--CHHHHHHHHHHHHC--CCEEEEECCCCC
Confidence 345678888987 88888888877654 579999999765
No 442
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=42.24 E-value=83 Score=28.12 Aligned_cols=34 Identities=15% Similarity=-0.055 Sum_probs=25.2
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
.+|.=||+ |..+..||..+... +.+|+.+|.+++
T Consensus 8 ~~I~iIG~--G~mG~~~a~~l~~~--G~~V~~~dr~~~ 41 (303)
T 3g0o_A 8 FHVGIVGL--GSMGMGAARSCLRA--GLSTWGADLNPQ 41 (303)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSCHH
T ss_pred CeEEEECC--CHHHHHHHHHHHHC--CCeEEEEECCHH
Confidence 57888988 77777777765433 568999998754
No 443
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=40.97 E-value=1.3e+02 Score=28.38 Aligned_cols=120 Identities=11% Similarity=0.065 Sum_probs=62.5
Q ss_pred EEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEee
Q 041517 158 VIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPFS 237 (327)
Q Consensus 158 ~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~~ 237 (327)
+|.=||+ |+.+..+|..+.. +.+|+++|.+++..+..++.. ....+... ..++.. . ..+ +.+.
T Consensus 2 kI~VIG~--G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~---~~i~e~~l-~~~~~~----~-~~~---l~~t 64 (402)
T 1dlj_A 2 KIAVAGS--GYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGL---SPIQDEYI-EYYLKS----K-QLS---IKAT 64 (402)
T ss_dssp EEEEECC--SHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTC---CSSCCHHH-HHHHHH----S-CCC---EEEE
T ss_pred EEEEECC--CHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCC---CCcCCCCH-HHHHHh----c-cCc---EEEe
Confidence 5667787 8888888887643 578999999865443222110 00001110 111111 0 111 3332
Q ss_pred ecchhhhhhhcCCcEeEEEEcCCCCC-------C--cHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHH
Q 041517 238 SGSALTKLCEWGVVGDLIEIDAGHDF-------N--SAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLF 304 (327)
Q Consensus 238 ~gda~~~L~~l~~~fDLIfIDa~h~~-------~--~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f 304 (327)
. +..+.+. ..|+|++-..... . .+...++.+.+ +++|.+|+..--. .+|..+.+.+.
T Consensus 65 ~-~~~~~~~----~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~----~~g~~~~l~~~ 130 (402)
T 1dlj_A 65 L-DSKAAYK----EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTI----PIGFITEMRQK 130 (402)
T ss_dssp S-CHHHHHH----HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCC----CTTHHHHHHHH
T ss_pred C-CHHHHhc----CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCC----CccHHHHHHHH
Confidence 2 2222222 3688888543321 0 36667778888 8998887753322 35665555443
No 444
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=40.95 E-value=1.3e+02 Score=26.67 Aligned_cols=112 Identities=13% Similarity=0.052 Sum_probs=58.8
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|.=||+ |..+..||..+... +.+|+.+|.+++..+. +...| +..
T Consensus 4 ~~I~iiG~--G~mG~~~a~~l~~~--G~~V~~~d~~~~~~~~-----------------------~~~~g-------~~~ 49 (302)
T 2h78_A 4 KQIAFIGL--GHMGAPMATNLLKA--GYLLNVFDLVQSAVDG-----------------------LVAAG-------ASA 49 (302)
T ss_dssp CEEEEECC--STTHHHHHHHHHHT--TCEEEEECSSHHHHHH-----------------------HHHTT-------CEE
T ss_pred CEEEEEee--cHHHHHHHHHHHhC--CCeEEEEcCCHHHHHH-----------------------HHHCC-------CeE
Confidence 47888888 66666666654433 5689999987543221 11112 111
Q ss_pred eecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHH---HHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 237 SSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADIN---RAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 237 ~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~---~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
..+..+.+ ...|+|++=... ...+...+. .+.+.+++|.+|+-.... .++..+.+.+.+.+.|..+
T Consensus 50 -~~~~~~~~----~~aDvvi~~vp~-~~~~~~v~~~~~~~~~~l~~~~~vi~~st~----~~~~~~~l~~~~~~~g~~~ 118 (302)
T 2h78_A 50 -ARSARDAV----QGADVVISMLPA-SQHVEGLYLDDDGLLAHIAPGTLVLECSTI----APTSARKIHAAARERGLAM 118 (302)
T ss_dssp -CSSHHHHH----TTCSEEEECCSC-HHHHHHHHHSSSCGGGSSCSSCEEEECSCC----CHHHHHHHHHHHHHTTCCE
T ss_pred -cCCHHHHH----hCCCeEEEECCC-HHHHHHHHcCchhHHhcCCCCcEEEECCCC----CHHHHHHHHHHHHHcCCEE
Confidence 11222222 236888885432 112233344 556678888766542222 2455555666566666554
No 445
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=40.81 E-value=1.1e+02 Score=22.80 Aligned_cols=36 Identities=11% Similarity=-0.025 Sum_probs=22.4
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCC-eEEEEE
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPG-GVIFGH 286 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pG-GvIi~d 286 (327)
..+|+|++|.......-...++.+.. ..++ -+|++.
T Consensus 59 ~~~dlvilD~~l~~~~g~~~~~~l~~-~~~~~~ii~ls 95 (138)
T 2b4a_A 59 STCDLLIVSDQLVDLSIFSLLDIVKE-QTKQPSVLILT 95 (138)
T ss_dssp GSCSEEEEETTCTTSCHHHHHHHHTT-SSSCCEEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHh-hCCCCCEEEEE
Confidence 46999999987755444445555555 3344 456665
No 446
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=40.45 E-value=1.1e+02 Score=23.51 Aligned_cols=50 Identities=12% Similarity=-0.080 Sum_probs=28.7
Q ss_pred chhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 240 SALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 240 da~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
+..+.+..+ ...+|+|++|.......-...++.+......--+|++.+..
T Consensus 35 ~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 35 SATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp CHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 344444333 35799999998765544445555555543333466665543
No 447
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=40.42 E-value=1.3e+02 Score=26.26 Aligned_cols=108 Identities=12% Similarity=0.013 Sum_probs=56.2
Q ss_pred EEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEee
Q 041517 158 VIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPFS 237 (327)
Q Consensus 158 ~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~~ 237 (327)
+|.=||+ |..+..++..+.. +.+|+.+|.+++..+.. ...|. ...
T Consensus 3 ~i~iiG~--G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~-----------------------~~~g~-------~~~ 47 (289)
T 2cvz_A 3 KVAFIGL--GAMGYPMAGHLAR---RFPTLVWNRTFEKALRH-----------------------QEEFG-------SEA 47 (289)
T ss_dssp CEEEECC--STTHHHHHHHHHT---TSCEEEECSSTHHHHHH-----------------------HHHHC-------CEE
T ss_pred eEEEEcc--cHHHHHHHHHHhC---CCeEEEEeCCHHHHHHH-----------------------HHCCC-------ccc
Confidence 4667787 6666667776543 46789998865432211 11121 111
Q ss_pred ecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCe
Q 041517 238 SGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLK 311 (327)
Q Consensus 238 ~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~ 311 (327)
. ..+.+ ...|+|++=... ...+...++.+.+.+++|.+|+.--.. .++..+.+.+.+...+..
T Consensus 48 ~--~~~~~----~~~D~vi~~v~~-~~~~~~v~~~l~~~l~~~~~vv~~s~~----~~~~~~~l~~~~~~~g~~ 110 (289)
T 2cvz_A 48 V--PLERV----AEARVIFTCLPT-TREVYEVAEALYPYLREGTYWVDATSG----EPEASRRLAERLREKGVT 110 (289)
T ss_dssp C--CGGGG----GGCSEEEECCSS-HHHHHHHHHHHTTTCCTTEEEEECSCC----CHHHHHHHHHHHHTTTEE
T ss_pred C--HHHHH----hCCCEEEEeCCC-hHHHHHHHHHHHhhCCCCCEEEECCCC----CHHHHHHHHHHHHHcCCE
Confidence 1 11222 247888875432 112334556667788888766632211 234445555555554543
No 448
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=40.13 E-value=1.3e+02 Score=26.43 Aligned_cols=111 Identities=11% Similarity=-0.084 Sum_probs=58.3
Q ss_pred EEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEee
Q 041517 158 VIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPFS 237 (327)
Q Consensus 158 ~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~~ 237 (327)
+|.=||+ |..+..||..+... +.+|+++|.+++..+...+ .| +..
T Consensus 3 ~I~iiG~--G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~-----------------------~g-------~~~- 47 (287)
T 3pdu_A 3 TYGFLGL--GIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVA-----------------------LG-------ARQ- 47 (287)
T ss_dssp CEEEECC--STTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHH-----------------------HT-------CEE-
T ss_pred eEEEEcc--CHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHH-----------------------CC-------Cee-
Confidence 5666787 66666666654433 5689999987654332111 12 111
Q ss_pred ecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHH---HHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 238 SGSALTKLCEWGVVGDLIEIDAGHDFNSAWADI---NRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 238 ~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl---~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
..+..+.+. ..|+|++=... ...+...+ +.+.+.+++|.+|+- ... ..++..+.+.+...+.|..+
T Consensus 48 ~~~~~~~~~----~advvi~~v~~-~~~~~~v~~~~~~l~~~l~~g~~vv~--~st--~~~~~~~~~~~~~~~~g~~~ 116 (287)
T 3pdu_A 48 ASSPAEVCA----ACDITIAMLAD-PAAAREVCFGANGVLEGIGGGRGYID--MST--VDDETSTAIGAAVTARGGRF 116 (287)
T ss_dssp CSCHHHHHH----HCSEEEECCSS-HHHHHHHHHSTTCGGGTCCTTCEEEE--CSC--CCHHHHHHHHHHHHHTTCEE
T ss_pred cCCHHHHHH----cCCEEEEEcCC-HHHHHHHHcCchhhhhcccCCCEEEE--CCC--CCHHHHHHHHHHHHHcCCEE
Confidence 112223222 25888874432 11223334 455677888877653 222 23666666666666666554
No 449
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=40.11 E-value=1.3e+02 Score=27.05 Aligned_cols=113 Identities=12% Similarity=0.046 Sum_probs=60.8
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceE
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVP 235 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~ 235 (327)
..+|.=||+ |..+..||+.+... +.+|+++|.+++..+ + +...| +.
T Consensus 31 ~~~I~iIG~--G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~---~--------------------l~~~g-------~~ 76 (320)
T 4dll_A 31 ARKITFLGT--GSMGLPMARRLCEA--GYALQVWNRTPARAA---S--------------------LAALG-------AT 76 (320)
T ss_dssp CSEEEEECC--TTTHHHHHHHHHHT--TCEEEEECSCHHHHH---H--------------------HHTTT-------CE
T ss_pred CCEEEEECc--cHHHHHHHHHHHhC--CCeEEEEcCCHHHHH---H--------------------HHHCC-------CE
Confidence 458999998 66666666655433 578999998754222 1 11112 22
Q ss_pred eeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHH--HHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 236 FSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADIN--RAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 236 ~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~--~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
.. .+..+.+ ...|+|++=... ...+...+. .+.+.+++|.+||-..-. .++..+.+.+.+.+.|..+
T Consensus 77 ~~-~~~~e~~----~~aDvVi~~vp~-~~~~~~v~~~~~~~~~l~~~~~vi~~st~----~~~~~~~~~~~~~~~g~~~ 145 (320)
T 4dll_A 77 IH-EQARAAA----RDADIVVSMLEN-GAVVQDVLFAQGVAAAMKPGSLFLDMASI----TPREARDHAARLGALGIAH 145 (320)
T ss_dssp EE-SSHHHHH----TTCSEEEECCSS-HHHHHHHHTTTCHHHHCCTTCEEEECSCC----CHHHHHHHHHHHHHTTCEE
T ss_pred ee-CCHHHHH----hcCCEEEEECCC-HHHHHHHHcchhHHhhCCCCCEEEecCCC----CHHHHHHHHHHHHHcCCEE
Confidence 11 1222222 236888875432 112223333 455678888776543322 3566666666666666554
No 450
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=40.11 E-value=1.1e+02 Score=22.85 Aligned_cols=41 Identities=15% Similarity=-0.121 Sum_probs=26.0
Q ss_pred CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 249 GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 249 ~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
...+|+|++|.......-...++.+...-..--+|++.+..
T Consensus 47 ~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 47 CNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp TTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 46899999998876555555566655543333466665544
No 451
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=39.91 E-value=32 Score=33.61 Aligned_cols=36 Identities=8% Similarity=0.084 Sum_probs=27.8
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR 193 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~ 193 (327)
+..++|+=+|+ |..+..+|+.+++. +.+|+.+|.++
T Consensus 218 L~GktV~ViG~--G~IGk~vA~~Lra~--Ga~Viv~D~dp 253 (435)
T 3gvp_A 218 FGGKQVVVCGY--GEVGKGCCAALKAM--GSIVYVTEIDP 253 (435)
T ss_dssp CTTCEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred ecCCEEEEEee--CHHHHHHHHHHHHC--CCEEEEEeCCh
Confidence 35789999999 66777777776655 56899999875
No 452
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=39.64 E-value=1e+02 Score=28.26 Aligned_cols=39 Identities=13% Similarity=0.132 Sum_probs=29.9
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCCh
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWP 196 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~ 196 (327)
+..++|.=||+ |..+..+|+.++.. +.+|+++|.++...
T Consensus 153 l~g~~vgIIG~--G~iG~~iA~~l~~~--G~~V~~~d~~~~~~ 191 (330)
T 2gcg_A 153 LTQSTVGIIGL--GRIGQAIARRLKPF--GVQRFLYTGRQPRP 191 (330)
T ss_dssp CTTCEEEEECC--SHHHHHHHHHHGGG--TCCEEEEESSSCCH
T ss_pred CCCCEEEEECc--CHHHHHHHHHHHHC--CCEEEEECCCCcch
Confidence 45678999998 88888888877644 56899999876543
No 453
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=39.29 E-value=1.2e+02 Score=26.25 Aligned_cols=58 Identities=19% Similarity=0.091 Sum_probs=32.5
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeE
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKV 312 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v 312 (327)
..||+|+||+........ + .....+.-..+|++-.... ....++.+.++.+ +..++++
T Consensus 127 ~~yD~ViID~pp~~~~~~--~-~~~~~~~aD~viiv~~~~~-~s~~~~~~~~~~l-~~~~~~~ 184 (262)
T 2ph1_A 127 GELDHLLIDLPPGTGDAP--L-TVMQDAKPTGVVVVSTPQE-LTAVIVEKAINMA-EETNTSV 184 (262)
T ss_dssp CSCSEEEEECCSSSSSHH--H-HHHHHHCCSEEEEEECSSS-CCHHHHHHHHHHH-HTTTCCE
T ss_pred cCCCEEEEECcCCCchHH--H-HHHhhccCCeEEEEecCcc-chHHHHHHHHHHH-HhCCCCE
Confidence 679999999876543311 1 1111223467777765544 3345666666654 4455553
No 454
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=39.28 E-value=1.1e+02 Score=23.02 Aligned_cols=40 Identities=18% Similarity=-0.115 Sum_probs=25.1
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHc--cCCCCeEEEEEcCC
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWR--ILRPGGVIFGHDYF 289 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~--lL~pGGvIi~dD~~ 289 (327)
..+|+|++|.......-...++.+.. ....--+|++.+..
T Consensus 51 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~ 92 (147)
T 2zay_A 51 THPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRA 92 (147)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCC
Confidence 46999999988765454555555555 23333567776554
No 455
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=39.28 E-value=81 Score=29.31 Aligned_cols=41 Identities=22% Similarity=0.159 Sum_probs=31.4
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhc-cCCCCcEEEEEeCCCCChh
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTR-QLGLDSQILCIDDFRGWPG 197 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r-~l~~~~~V~~ID~~~~~~~ 197 (327)
.+..++|.=||+ |..+..+|+.++ .. +.+|+++|.++...+
T Consensus 160 ~l~g~~vgIIG~--G~IG~~vA~~l~~~~--G~~V~~~d~~~~~~~ 201 (348)
T 2w2k_A 160 NPRGHVLGAVGL--GAIQKEIARKAVHGL--GMKLVYYDVAPADAE 201 (348)
T ss_dssp CSTTCEEEEECC--SHHHHHHHHHHHHTT--CCEEEEECSSCCCHH
T ss_pred CCCCCEEEEEEE--CHHHHHHHHHHHHhc--CCEEEEECCCCcchh
Confidence 455788999998 888888888765 44 579999999876544
No 456
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=39.21 E-value=88 Score=28.36 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=26.4
Q ss_pred CcEeEEEEcCCCCCC-----cHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 250 VVGDLIEIDAGHDFN-----SAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~-----~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
..||+|+||..-... .....+..+...+.+..++++-|...
T Consensus 179 ~~~D~ViIDTpg~~~~~~~~~l~~el~~i~~~~~~d~vllVvda~~ 224 (297)
T 1j8m_F 179 EKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASI 224 (297)
T ss_dssp TTCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGGG
T ss_pred CCCCEEEEeCCCCcccccHHHHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 579999999753332 12333444456678888888876653
No 457
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=39.05 E-value=93 Score=22.80 Aligned_cols=41 Identities=12% Similarity=-0.001 Sum_probs=26.5
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHcc--CCCCeEEEEEcCCC
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRI--LRPGGVIFGHDYFT 290 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~l--L~pGGvIi~dD~~~ 290 (327)
..+|+|++|.......-...++.+... ...--+|++.+...
T Consensus 46 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~ 88 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFAK 88 (127)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-C
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCcc
Confidence 569999999887665555566666554 33335666666554
No 458
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=38.81 E-value=65 Score=29.38 Aligned_cols=38 Identities=11% Similarity=0.169 Sum_probs=28.9
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
.+..++|.=||. |..+..+|+.++.. +.+|+++|.++.
T Consensus 119 ~l~g~tvGIIGl--G~IG~~vA~~l~~~--G~~V~~~dr~~~ 156 (290)
T 3gvx_A 119 LLYGKALGILGY--GGIGRRVAHLAKAF--GMRVIAYTRSSV 156 (290)
T ss_dssp CCTTCEEEEECC--SHHHHHHHHHHHHH--TCEEEEECSSCC
T ss_pred eeecchheeecc--CchhHHHHHHHHhh--CcEEEEEecccc
Confidence 355688999998 77777777776544 679999998764
No 459
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=38.79 E-value=2.7e+02 Score=26.72 Aligned_cols=127 Identities=12% Similarity=0.030 Sum_probs=65.0
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+.-=||+ |+-++.||..+.. .+.+|+++|.+++-.+...+-. .. ..++.+.+-+.+++. .+ + +.+
T Consensus 12 ~~~~ViGl--GyvGlp~A~~La~--~G~~V~~~D~~~~kv~~L~~g~-~p--i~epgl~~ll~~~~~-~g---~---l~~ 77 (431)
T 3ojo_A 12 SKLTVVGL--GYIGLPTSIMFAK--HGVDVLGVDINQQTIDKLQNGQ-IS--IEEPGLQEVYEEVLS-SG---K---LKV 77 (431)
T ss_dssp CEEEEECC--STTHHHHHHHHHH--TTCEEEEECSCHHHHHHHHTTC-CS--SCCTTHHHHHHHHHH-TT---C---EEE
T ss_pred CccEEEee--CHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHCCC-CC--cCCCCHHHHHHhhcc-cC---c---eEE
Confidence 34445665 5555555554322 2689999999876544222210 00 111111111122221 12 1 444
Q ss_pred eecchhhhhhhcCCcEeEEEEcCCCCC----------CcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHH-HH
Q 041517 237 SSGSALTKLCEWGVVGDLIEIDAGHDF----------NSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNL-FA 305 (327)
Q Consensus 237 ~~gda~~~L~~l~~~fDLIfIDa~h~~----------~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~-f~ 305 (327)
... + ...|+||+--.-+. ..+....+.+.+.|++|.+||..--. .||..+-+.+ +.
T Consensus 78 ttd-----~----~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV----~pgtt~~v~~~i~ 144 (431)
T 3ojo_A 78 STT-----P----EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTI----APKTMDDFVKPVI 144 (431)
T ss_dssp ESS-----C----CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCC----CTTHHHHTHHHHH
T ss_pred eCc-----h----hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCC----ChhHHHHHHHHHH
Confidence 432 1 13688887433222 23666778889999999877754433 4776665543 44
Q ss_pred HHcCC
Q 041517 306 KINGL 310 (327)
Q Consensus 306 ~~~gl 310 (327)
+..|+
T Consensus 145 e~~g~ 149 (431)
T 3ojo_A 145 ENLGF 149 (431)
T ss_dssp HTTTC
T ss_pred HHcCC
Confidence 44554
No 460
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=38.76 E-value=1.1e+02 Score=29.03 Aligned_cols=127 Identities=12% Similarity=-0.052 Sum_probs=61.8
Q ss_pred EEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEee
Q 041517 158 VIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPFS 237 (327)
Q Consensus 158 ~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~~ 237 (327)
+|.=||+ |+.+..+|..+... +.+|+++|.+++..+...+.. ... -.+.+...+.+++. .+ + +.+.
T Consensus 2 kI~VIG~--G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~-~~i--~e~~l~~~~~~~~~-~g---~---l~~t 67 (436)
T 1mv8_A 2 RISIFGL--GYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGK-SPI--VEPGLEALLQQGRQ-TG---R---LSGT 67 (436)
T ss_dssp EEEEECC--STTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTC-CSS--CCTTHHHHHHHHHH-TT---C---EEEE
T ss_pred EEEEECC--CHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCC-CCc--CCCCHHHHHHhhcc-cC---c---eEEe
Confidence 4666787 66666665554332 568999999875443222210 000 01111111111110 11 1 4433
Q ss_pred ecchhhhhhhcCCcEeEEEEcCCCCCC--------cHHHHHHHHHccCCC---CeEEEEEcCCCCCCchhH-HHHHHHHH
Q 041517 238 SGSALTKLCEWGVVGDLIEIDAGHDFN--------SAWADINRAWRILRP---GGVIFGHDYFTAADNRGV-RRAVNLFA 305 (327)
Q Consensus 238 ~gda~~~L~~l~~~fDLIfIDa~h~~~--------~v~~dl~~~~~lL~p---GGvIi~dD~~~~~~~~GV-~~Av~~f~ 305 (327)
. +..+.+. ..|+|++-...+.. .+...++.+.+.|++ |.+|+.--- ..+|. .+.+....
T Consensus 68 ~-~~~~~~~----~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~St----v~~g~t~~~l~~~l 138 (436)
T 1mv8_A 68 T-DFKKAVL----DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRST----VLPGTVNNVVIPLI 138 (436)
T ss_dssp S-CHHHHHH----TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSC----CCTTHHHHTHHHHH
T ss_pred C-CHHHHhc----cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCC----cCCCchHHHHHHHH
Confidence 2 2222232 36899986533221 055667778888888 666653211 23566 55555555
Q ss_pred HH
Q 041517 306 KI 307 (327)
Q Consensus 306 ~~ 307 (327)
..
T Consensus 139 ~~ 140 (436)
T 1mv8_A 139 ED 140 (436)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 461
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=38.63 E-value=45 Score=30.12 Aligned_cols=37 Identities=11% Similarity=0.172 Sum_probs=29.9
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR 193 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~ 193 (327)
+..|+ +++|+|.+..-++.+++.+.+..+|+++++..
T Consensus 167 ~d~vv-vpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~ 203 (304)
T 1ve1_A 167 IDAFV-YGSGTGGTITGVGRYLKERIPHVKVIAVEPAR 203 (304)
T ss_dssp CSEEE-EECSSSHHHHHHHHHHHTTCTTCEEEEEEEGG
T ss_pred CCEEE-EecCCchhHHHHHHHHHHhCCCCEEEEEecCC
Confidence 44444 88888988888888888788889999999854
No 462
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=38.63 E-value=1.2e+02 Score=26.19 Aligned_cols=37 Identities=11% Similarity=0.034 Sum_probs=25.3
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR 193 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~ 193 (327)
+..+++|=.|...|. +..+|+.+. ..+.+|+.++...
T Consensus 9 l~~k~vlVTGas~GI-G~aia~~la--~~G~~V~~~~r~~ 45 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNL-GALTAKTFA--LESVNLVLHYHQA 45 (262)
T ss_dssp CTTCEEEEETCSSHH-HHHHHHHHT--TSSCEEEEEESCG
T ss_pred CCCCEEEEECCCchH-HHHHHHHHH--HCCCEEEEEecCc
Confidence 356789999987664 455666542 3477899987653
No 463
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=38.36 E-value=63 Score=29.93 Aligned_cols=39 Identities=10% Similarity=0.171 Sum_probs=29.9
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCC
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGW 195 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~ 195 (327)
.+..++|.=||. |..+..+|+.+++. +.+|+++|.++..
T Consensus 134 ~l~gktvGIiGl--G~IG~~vA~~l~~~--G~~V~~~dr~~~~ 172 (324)
T 3evt_A 134 TLTGQQLLIYGT--GQIGQSLAAKASAL--GMHVIGVNTTGHP 172 (324)
T ss_dssp CSTTCEEEEECC--SHHHHHHHHHHHHT--TCEEEEEESSCCC
T ss_pred cccCCeEEEECc--CHHHHHHHHHHHhC--CCEEEEECCCcch
Confidence 345678999988 77888888876654 6799999987653
No 464
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=38.05 E-value=77 Score=29.96 Aligned_cols=36 Identities=17% Similarity=0.177 Sum_probs=28.8
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR 193 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~ 193 (327)
+..++|.=||. |..+..+|+.+++. +.+|+++|.+.
T Consensus 174 l~gktvGIIGl--G~IG~~vA~~l~~f--G~~V~~~d~~~ 209 (365)
T 4hy3_A 174 IAGSEIGIVGF--GDLGKALRRVLSGF--RARIRVFDPWL 209 (365)
T ss_dssp SSSSEEEEECC--SHHHHHHHHHHTTS--CCEEEEECSSS
T ss_pred cCCCEEEEecC--CcccHHHHHhhhhC--CCEEEEECCCC
Confidence 44678999988 88888888887644 68999999875
No 465
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=37.50 E-value=1.3e+02 Score=26.02 Aligned_cols=94 Identities=11% Similarity=-0.039 Sum_probs=50.3
Q ss_pred EEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEee
Q 041517 158 VIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPFS 237 (327)
Q Consensus 158 ~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~~ 237 (327)
+|.=||+ |..+..+|..+... +.+|+.+|.+++..+.... .+..+...+..+.
T Consensus 2 ~i~iiG~--G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~l~~-----------------------~~~~~~~~~~~~~ 54 (291)
T 1ks9_A 2 KITVLGC--GALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNL-----------------------VETDGSIFNESLT 54 (291)
T ss_dssp EEEEECC--SHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEE-----------------------ECTTSCEEEEEEE
T ss_pred eEEEECc--CHHHHHHHHHHHhC--CCCEEEEEcCccceeeEEE-----------------------EcCCCceeeeeee
Confidence 5777888 66666666654332 5689999988754321000 0000000012222
Q ss_pred ecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEE
Q 041517 238 SGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 238 ~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
..+ .+.+ ...|+|++=... ..+...++.+.+.+++|.+|+.
T Consensus 55 ~~~-~~~~----~~~d~vi~~v~~--~~~~~v~~~l~~~l~~~~~vv~ 95 (291)
T 1ks9_A 55 AND-PDFL----ATSDLLLVTLKA--WQVSDAVKSLASTLPVTTPILL 95 (291)
T ss_dssp ESC-HHHH----HTCSEEEECSCG--GGHHHHHHHHHTTSCTTSCEEE
T ss_pred ecC-cccc----CCCCEEEEEecH--HhHHHHHHHHHhhCCCCCEEEE
Confidence 222 2222 237888885433 2355667778888888886664
No 466
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=36.61 E-value=1.9e+02 Score=24.96 Aligned_cols=38 Identities=11% Similarity=-0.072 Sum_probs=26.9
Q ss_pred CCCEEEEEcCc-chHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 155 RPRVIIEVGSF-LGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 155 ~p~~VLEIGt~-~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
..++||=.|.. .|..+..+|+.+. ..+.+|+.++.++.
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~--~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCF--NQGATLAFTYLNES 43 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHH--TTTCEEEEEESSTT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHH--HCCCEEEEEeCCHH
Confidence 45789999986 2556666676653 33689999998765
No 467
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=36.57 E-value=1.2e+02 Score=22.57 Aligned_cols=38 Identities=11% Similarity=-0.052 Sum_probs=23.5
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHc--cCCCCeEEEEEc
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWR--ILRPGGVIFGHD 287 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~--lL~pGGvIi~dD 287 (327)
..+|+|++|.......-...++.+.. ....--+|++.+
T Consensus 49 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 88 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSA 88 (140)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEec
Confidence 57999999988765555555555554 222334555544
No 468
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=36.49 E-value=2.1e+02 Score=24.67 Aligned_cols=58 Identities=16% Similarity=0.096 Sum_probs=36.9
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchh---HHHHHHHHHHHcCCeEEE
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRG---VRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~G---V~~Av~~f~~~~gl~v~~ 314 (327)
-.+|+|++=+.-..-+ .. ++. .-++|+|=+|--.. |.|+| +..|+..=....|++++.
T Consensus 78 ~~~Dliv~agy~~il~--~~---~l~-~~~~~~iNiHpSlL-P~yrG~~pi~~ai~~G~~~tGvTvh~ 138 (212)
T 1jkx_A 78 YAPDVVVLAGFMRILS--PA---FVS-HYAGRLLNIHPSLL-PKYPGLHTHRQALENGDEEHGTSVHF 138 (212)
T ss_dssp GCCSEEEESSCCSCCC--HH---HHH-HTTTSEEEEESSCT-TSCCSSCHHHHHHHTTCSEEEEEEEE
T ss_pred cCCCEEEEeChhhhCC--HH---HHh-hccCCEEEEccCcc-cCCCCccHHHHHHHcCCCceEEEEEE
Confidence 3689999977643333 22 222 23479999999998 88999 555554433445666664
No 469
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=36.24 E-value=1e+02 Score=27.36 Aligned_cols=39 Identities=8% Similarity=-0.061 Sum_probs=25.2
Q ss_pred cCCCEEEEEcCcc-hHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 154 VRPRVIIEVGSFL-GASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 154 ~~p~~VLEIGt~~-G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
+..+++|=.|... ...+..+|+.+. ..+.+|+.+|.++.
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la--~~G~~V~~~~r~~~ 67 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVC--AQGAEVALTYLSET 67 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHH--HTTCEEEEEESSGG
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHH--HCCCEEEEEeCChH
Confidence 3568899999753 234444555432 23788999998754
No 470
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=36.10 E-value=88 Score=29.34 Aligned_cols=41 Identities=12% Similarity=0.168 Sum_probs=31.4
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcE-EEEEeCCCCChh
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQ-ILCIDDFRGWPG 197 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~-V~~ID~~~~~~~ 197 (327)
.+..++|.=||+ |..+..+|+.++.. +.+ |+++|..+...+
T Consensus 161 ~l~g~tvgIIG~--G~IG~~vA~~l~~~--G~~~V~~~d~~~~~~~ 202 (364)
T 2j6i_A 161 DIEGKTIATIGA--GRIGYRVLERLVPF--NPKELLYYDYQALPKD 202 (364)
T ss_dssp CSTTCEEEEECC--SHHHHHHHHHHGGG--CCSEEEEECSSCCCHH
T ss_pred cCCCCEEEEECc--CHHHHHHHHHHHhC--CCcEEEEECCCccchh
Confidence 456789999998 88888888887654 465 999998765443
No 471
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=35.96 E-value=65 Score=29.71 Aligned_cols=38 Identities=21% Similarity=0.209 Sum_probs=29.7
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCC
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGW 195 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~ 195 (327)
+..++|.=||+ |..+..+|+.++.. +.+|+++|.++..
T Consensus 148 l~g~~vgIIG~--G~iG~~iA~~l~~~--G~~V~~~d~~~~~ 185 (334)
T 2dbq_A 148 VYGKTIGIIGL--GRIGQAIAKRAKGF--NMRILYYSRTRKE 185 (334)
T ss_dssp CTTCEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSSCCH
T ss_pred CCCCEEEEEcc--CHHHHHHHHHHHhC--CCEEEEECCCcch
Confidence 45678999997 88888888876644 5799999997753
No 472
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=35.79 E-value=97 Score=27.00 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=22.5
Q ss_pred EEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 158 VIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 158 ~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
+|.=||+ |..+..++..+... +.+|+.+|.+++
T Consensus 2 ~i~iiG~--G~~G~~~a~~l~~~--g~~V~~~~~~~~ 34 (279)
T 2f1k_A 2 KIGVVGL--GLIGASLAGDLRRR--GHYLIGVSRQQS 34 (279)
T ss_dssp EEEEECC--SHHHHHHHHHHHHT--TCEEEEECSCHH
T ss_pred EEEEEcC--cHHHHHHHHHHHHC--CCEEEEEECCHH
Confidence 5667887 66666677665433 458999988654
No 473
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=35.69 E-value=1.4e+02 Score=22.33 Aligned_cols=52 Identities=12% Similarity=-0.184 Sum_probs=29.7
Q ss_pred cchhhhhhhc-CCcEeEEEEcCCCCC--CcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 239 GSALTKLCEW-GVVGDLIEIDAGHDF--NSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 239 gda~~~L~~l-~~~fDLIfIDa~h~~--~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
.+..+.+..+ ...+|+|++|..... ..-...++.+...-..--+|++.....
T Consensus 37 ~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 91 (136)
T 3kto_A 37 ASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSD 91 (136)
T ss_dssp SSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCC
T ss_pred CCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCC
Confidence 3444544443 367999999987654 444445555554432234666665543
No 474
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=35.55 E-value=2.5e+02 Score=25.31 Aligned_cols=44 Identities=11% Similarity=0.037 Sum_probs=23.3
Q ss_pred hhcCCCEEEEEcCcchHHHHHHHHHhccC------CCCcEEEEE-eCCCCChh
Q 041517 152 DKVRPRVIIEVGSFLGASALHMANLTRQL------GLDSQILCI-DDFRGWPG 197 (327)
Q Consensus 152 ~~~~p~~VLEIGt~~G~Sal~lA~a~r~l------~~~~~V~~I-D~~~~~~~ 197 (327)
...++-+|.=|||| ..+..-+++++.+ .++.+|++| |.+++..+
T Consensus 21 ~~MkkirvgiIG~G--~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~ 71 (393)
T 4fb5_A 21 QSMKPLGIGLIGTG--YMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAE 71 (393)
T ss_dssp ---CCCEEEEECCS--HHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHH
T ss_pred cCCCCccEEEEcCC--HHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHH
Confidence 34578899999995 4444334333322 245677764 88776543
No 475
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=35.50 E-value=1.4e+02 Score=22.28 Aligned_cols=39 Identities=13% Similarity=0.166 Sum_probs=24.0
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHcc-CCCC-eEEEEEcC
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRI-LRPG-GVIFGHDY 288 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~l-L~pG-GvIi~dD~ 288 (327)
..+|+|++|.......-...++.+... ..+. -+|++.+.
T Consensus 50 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 90 (142)
T 3cg4_A 50 GFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAK 90 (142)
T ss_dssp CCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECT
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECC
Confidence 569999999887654444555555541 3344 46666544
No 476
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=34.90 E-value=1.1e+02 Score=23.53 Aligned_cols=40 Identities=13% Similarity=-0.153 Sum_probs=24.5
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
..+|+|++|.......-...++.+...-..--+|++....
T Consensus 57 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 57 REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 5799999998876555455555555533223456655443
No 477
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=34.81 E-value=52 Score=30.40 Aligned_cols=37 Identities=16% Similarity=0.047 Sum_probs=28.3
Q ss_pred EEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 158 VIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 158 ~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
..+=++||+|.+..-++..++.+.+..+|++||+...
T Consensus 201 d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~ 237 (342)
T 4d9b_A 201 SSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRS 237 (342)
T ss_dssp CEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCc
Confidence 4555666677777777777777788999999999654
No 478
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=34.65 E-value=2.2e+02 Score=24.46 Aligned_cols=58 Identities=22% Similarity=0.207 Sum_probs=38.4
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchh---HHHHHHHHHHHcCCeEEE
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRG---VRRAVNLFAKINGLKVQI 314 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~G---V~~Av~~f~~~~gl~v~~ 314 (327)
..+|+|++=+...--+ ..++. .-++|+|=+|--.. |.|+| +..|+..=....|++++.
T Consensus 79 ~~~Dliv~a~y~~il~-----~~~l~-~~~~~~iNiHpSLL-P~yrG~~pi~~ai~~G~~~tGvTvh~ 139 (216)
T 2ywr_A 79 KGVELVVLAGFMRILS-----HNFLK-YFPNKVINIHPSLI-PAFQGLHAQKQAVEFGVKFSGCTVHI 139 (216)
T ss_dssp TTCCEEEESSCCSCCC-----HHHHT-TSTTCEEEEESSCT-TTTCSTTHHHHHHHHTCSEEEEEEEE
T ss_pred cCCCEEEEeCchhhCC-----HHHHh-hccCCeEEEcCCcC-cCCCCccHHHHHHHcCCCeEEEEEEE
Confidence 4689999877644433 33333 34589999999988 88999 555554444455777664
No 479
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=34.57 E-value=38 Score=35.42 Aligned_cols=93 Identities=13% Similarity=0.156 Sum_probs=52.2
Q ss_pred CCCEEEEEcC--cchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 155 RPRVIIEVGS--FLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 155 ~p~~VLEIGt--~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
+..+||=.|. +.|..++.+|++ + +.+|++++..+.. +... .| . +.+
T Consensus 345 ~G~~VLI~gaaGgvG~~aiqlAk~---~--Ga~V~~t~~~~k~-----~~l~----lg----------------a-~~v- 392 (795)
T 3slk_A 345 PGESLLVHSAAGGVGMAAIQLARH---L--GAEVYATASEDKW-----QAVE----LS----------------R-EHL- 392 (795)
T ss_dssp TTCCEEEESTTBHHHHHHHHHHHH---T--TCCEEEECCGGGG-----GGSC----SC----------------G-GGE-
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH---c--CCEEEEEeChHHh-----hhhh----cC----------------h-hhe-
Confidence 3568999984 567777888875 3 4689988754311 1110 01 0 000
Q ss_pred ceEeeecchhhhhhhc--CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEE
Q 041517 233 PVPFSSGSALTKLCEW--GVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGH 286 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l--~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~d 286 (327)
+.....+..+.+.+. +..+|+|+--... ..++..++.|+|||.++.-
T Consensus 393 -~~~~~~~~~~~i~~~t~g~GvDvVld~~gg------~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 393 -ASSRTCDFEQQFLGATGGRGVDVVLNSLAG------EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp -ECSSSSTHHHHHHHHSCSSCCSEEEECCCT------TTTHHHHTSCTTCEEEEEC
T ss_pred -eecCChhHHHHHHHHcCCCCeEEEEECCCc------HHHHHHHHHhcCCCEEEEe
Confidence 111122222323222 3568988753322 2458889999999988874
No 480
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=34.44 E-value=51 Score=30.57 Aligned_cols=46 Identities=11% Similarity=0.006 Sum_probs=33.0
Q ss_pred HHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC
Q 041517 148 GNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR 193 (327)
Q Consensus 148 ~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~ 193 (327)
..+.+..+.-..+=+++|+|.+..-++.+++.+.++.+|+++|+..
T Consensus 168 ~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 213 (346)
T 3l6b_A 168 LEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSN 213 (346)
T ss_dssp HHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred HHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 3444444433456677777888877888777778899999999865
No 481
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=34.40 E-value=2.5e+02 Score=25.08 Aligned_cols=112 Identities=17% Similarity=0.085 Sum_probs=63.6
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCc-EEEEEeCCC--CChhhhhhhcccCccccchHHHHHHHHHHhhhccCCccc
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDS-QILCIDDFR--GWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVL 232 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~-~V~~ID~~~--~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~ 232 (327)
..+|.=||+ |..+..||+.+... +. +|+++|.++ ...+ .+...|
T Consensus 24 ~~~I~iIG~--G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~-----------------------~~~~~g------ 70 (312)
T 3qsg_A 24 AMKLGFIGF--GEAASAIASGLRQA--GAIDMAAYDAASAESWRP-----------------------RAEELG------ 70 (312)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHH-----------------------HHHHTT------
T ss_pred CCEEEEECc--cHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHH-----------------------HHHHCC------
Confidence 357888998 77777777765443 34 899999864 2111 111112
Q ss_pred ceEeeecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHc--CC
Q 041517 233 PVPFSSGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKIN--GL 310 (327)
Q Consensus 233 ~V~~~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~--gl 310 (327)
+.. ..+..+.+. ..|+|++=..- ......++.+.+.+++|.+||-..- ..++..+.+.+..... |.
T Consensus 71 -~~~-~~~~~e~~~----~aDvVi~~vp~--~~~~~~~~~l~~~l~~~~ivvd~st----~~~~~~~~~~~~~~~~~~g~ 138 (312)
T 3qsg_A 71 -VSC-KASVAEVAG----ECDVIFSLVTA--QAALEVAQQAGPHLCEGALYADFTS----CSPAVKRAIGDVISRHRPSA 138 (312)
T ss_dssp -CEE-CSCHHHHHH----HCSEEEECSCT--TTHHHHHHHHGGGCCTTCEEEECCC----CCHHHHHHHHHHHHHHCTTC
T ss_pred -CEE-eCCHHHHHh----cCCEEEEecCc--hhHHHHHHhhHhhcCCCCEEEEcCC----CCHHHHHHHHHHHHhhcCCC
Confidence 111 112223332 36888885433 2233567888899999887663221 2367777776666655 55
Q ss_pred eE
Q 041517 311 KV 312 (327)
Q Consensus 311 ~v 312 (327)
.+
T Consensus 139 ~~ 140 (312)
T 3qsg_A 139 QY 140 (312)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 482
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=34.16 E-value=1.4e+02 Score=22.26 Aligned_cols=39 Identities=18% Similarity=0.092 Sum_probs=22.3
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
..+|+|++|. .....-...++.+......--+|++.+..
T Consensus 47 ~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 47 EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 5799999998 54333333444444433333466665543
No 483
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=34.13 E-value=89 Score=28.65 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=29.6
Q ss_pred hcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeC-CCC
Q 041517 153 KVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDD-FRG 194 (327)
Q Consensus 153 ~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~-~~~ 194 (327)
.+..++|.=||+ |..+..+|+.++.. +.+|+++|. ++.
T Consensus 143 ~l~g~~vgIIG~--G~IG~~~A~~l~~~--G~~V~~~d~~~~~ 181 (320)
T 1gdh_A 143 KLDNKTLGIYGF--GSIGQALAKRAQGF--DMDIDYFDTHRAS 181 (320)
T ss_dssp CCTTCEEEEECC--SHHHHHHHHHHHTT--TCEEEEECSSCCC
T ss_pred CCCCCEEEEECc--CHHHHHHHHHHHHC--CCEEEEECCCCcC
Confidence 345678988988 88888888877644 589999998 764
No 484
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=34.07 E-value=1e+02 Score=27.73 Aligned_cols=39 Identities=15% Similarity=-0.039 Sum_probs=29.7
Q ss_pred EEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhh
Q 041517 158 VIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDK 201 (327)
Q Consensus 158 ~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~ 201 (327)
+|||+=||.|..++-+-++ | -..+.++|+++...+.-+.
T Consensus 2 kvidLFsG~GG~~~G~~~a----G-~~~v~a~e~d~~a~~ty~~ 40 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA----G-FRIICANEYDKSIWKTYES 40 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT----T-CEEEEEEECCTTTHHHHHH
T ss_pred eEEEeCcCccHHHHHHHHC----C-CEEEEEEeCCHHHHHHHHH
Confidence 7999999999998887764 3 2457799999876654333
No 485
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=33.94 E-value=3.3e+02 Score=26.19 Aligned_cols=59 Identities=15% Similarity=0.233 Sum_probs=36.7
Q ss_pred CcEeEEEEcCCC-----CCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCe
Q 041517 250 VVGDLIEIDAGH-----DFNSAWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLK 311 (327)
Q Consensus 250 ~~fDLIfIDa~h-----~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~ 311 (327)
..+|+|+||..- ........+..+.+.++|..++++-|.... ..+..-.+.|.+..++.
T Consensus 178 ~~~DvvIIDTaGr~~~~~d~~lm~el~~i~~~~~pd~vlLVlDa~~g---q~a~~~a~~f~~~~~~~ 241 (433)
T 3kl4_A 178 NKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIG---QKAYDLASRFHQASPIG 241 (433)
T ss_dssp TTCSEEEEEECCCSSSCCTTHHHHHHHHHHHHHCCSEEEEEEEGGGG---GGGHHHHHHHHHHCSSE
T ss_pred cCCCEEEEECCCCccccCCHHHHHHHHHHHHhhCCcceEEEEeCccc---hHHHHHHHHHhcccCCc
Confidence 479999999432 233455667777888899998888777652 22333335555444443
No 486
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=33.93 E-value=39 Score=31.24 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=26.3
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
.++|+=||.|.|..+ .|..++..+++.+|+.||..+.
T Consensus 2 GKkVvIIG~G~AG~~--aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGAT--AAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHH--HHHHHHHHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHH--HHHHHHhcCcCCeEEEEeCCCC
Confidence 478999999765543 3433444567889999998764
No 487
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=33.92 E-value=1.3e+02 Score=26.52 Aligned_cols=40 Identities=13% Similarity=-0.039 Sum_probs=26.5
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhh
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFR 199 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A 199 (327)
-++|.=||+ |..+..+|..+... +.+|+.+|.+++..+.+
T Consensus 4 ~~kV~VIGa--G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~ 43 (283)
T 4e12_A 4 ITNVTVLGT--GVLGSQIAFQTAFH--GFAVTAYDINTDALDAA 43 (283)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHT--TCEEEEECSSHHHHHHH
T ss_pred CCEEEEECC--CHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHH
Confidence 357888888 55555555554332 67999999987655443
No 488
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=33.48 E-value=1.5e+02 Score=22.45 Aligned_cols=49 Identities=6% Similarity=-0.017 Sum_probs=29.1
Q ss_pred chhhhhhhc-CCcEeEEEEcCCCCCCcHHHHHHHHHccCCCC-eEEEEEcCC
Q 041517 240 SALTKLCEW-GVVGDLIEIDAGHDFNSAWADINRAWRILRPG-GVIFGHDYF 289 (327)
Q Consensus 240 da~~~L~~l-~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pG-GvIi~dD~~ 289 (327)
+..+.+..+ ...+|+|++|.......-...++.+... .|+ -+|++.+..
T Consensus 54 ~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~-~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 54 NGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSE-KLETKVVVVTTFK 104 (150)
T ss_dssp SHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHT-TCSCEEEEEESCC
T ss_pred CHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHh-CCCCeEEEEeCCC
Confidence 333443333 3679999999887655555556665554 344 466665554
No 489
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=33.40 E-value=90 Score=30.06 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=25.8
Q ss_pred CcEeEEEEcCCCCCC---cHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 250 VVGDLIEIDAGHDFN---SAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~---~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
..+|+|+||..-... .....+..+...+.|..++++-|...
T Consensus 179 ~~~D~vIIDT~G~~~~~~~l~~~l~~i~~~~~~d~vllVvda~~ 222 (432)
T 2v3c_C 179 KKADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTI 222 (432)
T ss_dssp SSCSEEEEECCCSCSSHHHHHHHHHHTTSSSCCSEEEEEEEGGG
T ss_pred hCCCEEEEcCCCCccccHHHHHHHHHHHHHhcCcceeEEeeccc
Confidence 678999999653222 13344445566667888777766543
No 490
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=33.24 E-value=1e+02 Score=28.74 Aligned_cols=38 Identities=18% Similarity=0.079 Sum_probs=29.6
Q ss_pred cCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCC
Q 041517 154 VRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGW 195 (327)
Q Consensus 154 ~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~ 195 (327)
+..++|.=||. |..+..+|+.+++. +.+|+++|..+..
T Consensus 171 l~gktvGIIGl--G~IG~~vA~~l~~~--G~~V~~~dr~~~~ 208 (345)
T 4g2n_A 171 LTGRRLGIFGM--GRIGRAIATRARGF--GLAIHYHNRTRLS 208 (345)
T ss_dssp CTTCEEEEESC--SHHHHHHHHHHHTT--TCEEEEECSSCCC
T ss_pred cCCCEEEEEEe--ChhHHHHHHHHHHC--CCEEEEECCCCcc
Confidence 44678888988 88888888887644 6799999997643
No 491
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=33.15 E-value=1.6e+02 Score=22.41 Aligned_cols=40 Identities=8% Similarity=-0.129 Sum_probs=23.7
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCC
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYF 289 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~ 289 (327)
..+|+|++|.......-...++.+...-..--+|++.+..
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 50 TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 5699999998765544444555554433223466665443
No 492
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=32.92 E-value=56 Score=30.15 Aligned_cols=49 Identities=6% Similarity=-0.056 Sum_probs=34.9
Q ss_pred HHHHHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 146 VFGNLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 146 lL~~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
+-..+.+..+.-..+=+++|+|.+..-++..++.+.+..+|+++|+...
T Consensus 178 ~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 226 (342)
T 2gn0_A 178 IGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENV 226 (342)
T ss_dssp HHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTB
T ss_pred HHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCCC
Confidence 3344444444345666788888888888887777788999999999653
No 493
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=32.50 E-value=68 Score=29.02 Aligned_cols=113 Identities=11% Similarity=-0.027 Sum_probs=56.2
Q ss_pred CEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCCChhhhhhhcccCccccchHHHHHHHHHHhhhccCCcccceEe
Q 041517 157 RVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRGWPGFRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSVLPVPF 236 (327)
Q Consensus 157 ~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~~~~~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v~~V~~ 236 (327)
.+|-=||. |..+..||+.+. ..+.+|+++|.+++-.+... ..|. ..
T Consensus 6 ~kIgfIGL--G~MG~~mA~~L~--~~G~~V~v~dr~~~~~~~l~-----------------------~~G~-------~~ 51 (297)
T 4gbj_A 6 EKIAFLGL--GNLGTPIAEILL--EAGYELVVWNRTASKAEPLT-----------------------KLGA-------TV 51 (297)
T ss_dssp CEEEEECC--STTHHHHHHHHH--HTTCEEEEC-------CTTT-----------------------TTTC-------EE
T ss_pred CcEEEEec--HHHHHHHHHHHH--HCCCeEEEEeCCHHHHHHHH-----------------------HcCC-------eE
Confidence 36777877 777777777653 23678999998775432111 1111 10
Q ss_pred eecchhhhhhhcCCcEeEEEEcCCCCCCcHHH-HHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeEE
Q 041517 237 SSGSALTKLCEWGVVGDLIEIDAGHDFNSAWA-DINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKVQ 313 (327)
Q Consensus 237 ~~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~-dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v~ 313 (327)
.... .+.-..-|+||+=-.. ...+.. ....+.+.+++|+++|-..-. .|...+.+.+.+...|+.+.
T Consensus 52 -~~s~----~e~~~~~dvvi~~l~~-~~~~~~v~~~~~~~~~~~~~iiid~sT~----~p~~~~~~~~~~~~~g~~~l 119 (297)
T 4gbj_A 52 -VENA----IDAITPGGIVFSVLAD-DAAVEELFSMELVEKLGKDGVHVSMSTI----SPETSRQLAQVHEWYGAHYV 119 (297)
T ss_dssp -CSSG----GGGCCTTCEEEECCSS-HHHHHHHSCHHHHHHHCTTCEEEECSCC----CHHHHHHHHHHHHHTTCEEE
T ss_pred -eCCH----HHHHhcCCceeeeccc-hhhHHHHHHHHHHhhcCCCeEEEECCCC----ChHHHHHHHHHHHhcCCcee
Confidence 0111 1122345777763321 111111 124567788888876643332 36766777777777776653
No 494
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=32.47 E-value=1e+02 Score=28.36 Aligned_cols=35 Identities=9% Similarity=-0.011 Sum_probs=23.9
Q ss_pred CCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 156 PRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 156 p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
..+|.=||+ |..+..+|..++.. +.+|+.+|.++.
T Consensus 16 ~~~I~IIG~--G~mG~alA~~L~~~--G~~V~~~~~~~~ 50 (338)
T 1np3_A 16 GKKVAIIGY--GSQGHAHACNLKDS--GVDVTVGLRSGS 50 (338)
T ss_dssp TSCEEEECC--SHHHHHHHHHHHHT--TCCEEEECCTTC
T ss_pred CCEEEEECc--hHHHHHHHHHHHHC--cCEEEEEECChH
Confidence 457888998 66666666665544 357888888764
No 495
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=32.29 E-value=1.3e+02 Score=25.61 Aligned_cols=40 Identities=10% Similarity=0.006 Sum_probs=26.4
Q ss_pred hcCCCEEEEEcCc-chHHHHHHHHHhccCCCCcEEEEEeCCCC
Q 041517 153 KVRPRVIIEVGSF-LGASALHMANLTRQLGLDSQILCIDDFRG 194 (327)
Q Consensus 153 ~~~p~~VLEIGt~-~G~Sal~lA~a~r~l~~~~~V~~ID~~~~ 194 (327)
..+.++||=.|.. +|..+..+|+.+.. .+.+|+.++..+.
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~--~G~~V~~~~r~~~ 51 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKR--EGAELAFTYVGDR 51 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHH--TTCEEEEEESSGG
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHH--cCCCEEEEecchh
Confidence 3467899999975 24445556655432 3679999988743
No 496
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=32.19 E-value=1.8e+02 Score=22.67 Aligned_cols=40 Identities=15% Similarity=0.123 Sum_probs=24.4
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCC
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFT 290 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~ 290 (327)
..+|+|++|.......-...++.+.. ..+--+|++.....
T Consensus 70 ~~~dlvilD~~l~~~~g~~l~~~lr~-~~~~~ii~~s~~~~ 109 (164)
T 3t8y_A 70 LKPDVITMDIEMPNLNGIEALKLIMK-KAPTRVIMVSSLTE 109 (164)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHH-HSCCEEEEEESSCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHh-cCCceEEEEecCCc
Confidence 46899999987655444444554443 34455666665543
No 497
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=32.17 E-value=56 Score=28.56 Aligned_cols=49 Identities=12% Similarity=0.132 Sum_probs=30.9
Q ss_pred HHHHHHHHHccCCCCeEEEEEcCCCCCCchhHHHHHHHHHHHcCCeEEEcc
Q 041517 266 AWADINRAWRILRPGGVIFGHDYFTAADNRGVRRAVNLFAKINGLKVQIDG 316 (327)
Q Consensus 266 v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~GV~~Av~~f~~~~gl~v~~~g 316 (327)
....++.+.+.++||+||++||... .......+.++. .++.|+++.+..
T Consensus 179 ~~~~~~~v~~~~~~g~Iil~Hd~~~-~t~~aL~~ii~~-l~~~Gy~fvtl~ 227 (240)
T 1ny1_A 179 KKYAYDHMIKQAHPGAIYLLHTVSR-DNAEALDDAITD-LKKQGYTFKSID 227 (240)
T ss_dssp HHHHHHHHHHTCCTTEEEEECSCST-THHHHHHHHHHH-HHHHTCEEECHH
T ss_pred HHHHHHHHHhCCCCCeEEEEcCCCh-hHHHHHHHHHHH-HHHCCCEEEEhH
Confidence 4456778888899999999999753 122223333333 355688776543
No 498
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=32.13 E-value=1.3e+02 Score=27.16 Aligned_cols=34 Identities=9% Similarity=-0.161 Sum_probs=22.7
Q ss_pred CcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEE
Q 041517 250 VVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFG 285 (327)
Q Consensus 250 ~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~ 285 (327)
..+|+|++=.-... ....++.+.+.+.++.+|+.
T Consensus 70 ~~~DlVilavK~~~--~~~~l~~l~~~l~~~t~Iv~ 103 (320)
T 3i83_A 70 TKPDCTLLCIKVVE--GADRVGLLRDAVAPDTGIVL 103 (320)
T ss_dssp SCCSEEEECCCCCT--TCCHHHHHTTSCCTTCEEEE
T ss_pred CCCCEEEEecCCCC--hHHHHHHHHhhcCCCCEEEE
Confidence 46899998543222 22567778889999886654
No 499
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=31.99 E-value=1.9e+02 Score=25.15 Aligned_cols=123 Identities=15% Similarity=0.031 Sum_probs=70.6
Q ss_pred CCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC-CChh--hhhhhcccCccccchHHHHHHHHHHhhhccCCcc
Q 041517 155 RPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR-GWPG--FRDKFKEIPMVNGNVLLYFQFLQNVIYQNAIDSV 231 (327)
Q Consensus 155 ~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~-~~~~--~A~~~~~~~~~~g~~~~~~~Fl~nv~~~g~~~~v 231 (327)
++.+|+=+-+|+|.....+..+++.-..+.+|.+|=.+. .... .|++ .|.
T Consensus 7 ~~~ri~vl~SG~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~-----------------------~gI---- 59 (215)
T 3kcq_A 7 KELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQS-----------------------YGI---- 59 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHH-----------------------TTC----
T ss_pred CCCEEEEEEECCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHH-----------------------cCC----
Confidence 356888899999999999998765322235676665543 2211 2221 121
Q ss_pred cceEee------ecchhhhhhhcCCcEeEEEEcCCCCCCcHHHHHHHHHccCCCCeEEEEEcCCCCCCchh---HHHHHH
Q 041517 232 LPVPFS------SGSALTKLCEWGVVGDLIEIDAGHDFNSAWADINRAWRILRPGGVIFGHDYFTAADNRG---VRRAVN 302 (327)
Q Consensus 232 ~~V~~~------~gda~~~L~~l~~~fDLIfIDa~h~~~~v~~dl~~~~~lL~pGGvIi~dD~~~~~~~~G---V~~Av~ 302 (327)
|+... .....+.|.. ..+|+|++-+.-..-+ ..+-.. -++|+|=+|--.. |.|+| +..|+.
T Consensus 60 -p~~~~~~~~~~~~~~~~~L~~--~~~Dlivlagy~~IL~--~~~l~~----~~~~~iNiHpSLL-P~yrG~~pi~~Ai~ 129 (215)
T 3kcq_A 60 -PTFVVKRKPLDIEHISTVLRE--HDVDLVCLAGFMSILP--EKFVTD----WHHKIINIHPSLL-PSFKGLNAQEQAYK 129 (215)
T ss_dssp -CEEECCBTTBCHHHHHHHHHH--TTCSEEEESSCCSCCC--HHHHHH----TTTSEEEEESSCT-TTTCSSCHHHHHHH
T ss_pred -CEEEeCcccCChHHHHHHHHH--hCCCEEEEeCCceEeC--HHHHhh----ccCCeEEECcccc-cCCCCccHHHHHHH
Confidence 11111 1112233333 4689999987654433 222222 3479999999988 88999 555555
Q ss_pred HHHHHcCCeEEE
Q 041517 303 LFAKINGLKVQI 314 (327)
Q Consensus 303 ~f~~~~gl~v~~ 314 (327)
.=.+..|++++.
T Consensus 130 ~G~~~tGvTvh~ 141 (215)
T 3kcq_A 130 AGVKIAGCTLHY 141 (215)
T ss_dssp HTCSEEEEEEEE
T ss_pred cCCCeEEEEEEE
Confidence 444555667664
No 500
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=31.95 E-value=46 Score=30.39 Aligned_cols=45 Identities=16% Similarity=0.091 Sum_probs=32.7
Q ss_pred HHHhhcCCCEEEEEcCcchHHHHHHHHHhccCCCCcEEEEEeCCC
Q 041517 149 NLIDKVRPRVIIEVGSFLGASALHMANLTRQLGLDSQILCIDDFR 193 (327)
Q Consensus 149 ~L~~~~~p~~VLEIGt~~G~Sal~lA~a~r~l~~~~~V~~ID~~~ 193 (327)
.+.+..+.-..+=+++|+|.+..-++..++.+.++.+|+++++..
T Consensus 167 Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~ 211 (323)
T 1v71_A 167 ELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEA 211 (323)
T ss_dssp HHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred HHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 333333323566678888888888888887778899999999964
Done!