Query 041518
Match_columns 765
No_of_seqs 697 out of 4708
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 13:23:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041518.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041518hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n6r_A Propionyl-COA carboxyla 100.0 2E-109 6E-114 979.2 48.9 645 36-718 1-681 (681)
2 3u9t_A MCC alpha, methylcroton 100.0 9E-110 3E-114 981.0 44.7 633 34-720 25-673 (675)
3 3jrx_A Acetyl-COA carboxylase 100.0 7.1E-84 2.4E-88 744.7 43.0 438 32-476 51-565 (587)
4 3hbl_A Pyruvate carboxylase; T 100.0 2.1E-82 7.2E-87 781.7 53.0 435 35-474 2-460 (1150)
5 3glk_A Acetyl-COA carboxylase 100.0 4.3E-82 1.5E-86 727.7 38.1 427 33-466 36-539 (540)
6 3ouz_A Biotin carboxylase; str 100.0 4.3E-78 1.5E-82 683.8 48.7 429 33-466 2-446 (446)
7 3va7_A KLLA0E08119P; carboxyla 100.0 1.2E-73 4E-78 705.0 36.4 437 26-467 19-472 (1236)
8 2qf7_A Pyruvate carboxylase pr 100.0 2E-70 6.9E-75 676.8 38.0 431 34-467 11-472 (1165)
9 2vpq_A Acetyl-COA carboxylase; 100.0 1.5E-67 5E-72 598.2 46.6 430 37-469 1-447 (451)
10 1ulz_A Pyruvate carboxylase N- 100.0 2.1E-67 7.3E-72 596.9 43.5 429 36-468 1-445 (451)
11 1w96_A ACC, acetyl-coenzyme A 100.0 1.9E-67 6.6E-72 611.5 43.2 427 34-466 44-553 (554)
12 2dzd_A Pyruvate carboxylase; b 100.0 9.4E-67 3.2E-71 593.3 47.5 433 34-471 3-459 (461)
13 2w70_A Biotin carboxylase; lig 100.0 3.1E-66 1.1E-70 587.0 45.3 428 36-468 1-445 (449)
14 4dim_A Phosphoribosylglycinami 100.0 9.9E-49 3.4E-53 437.1 39.1 367 36-431 6-381 (403)
15 3vot_A L-amino acid ligase, BL 100.0 6.7E-45 2.3E-49 409.2 34.8 371 36-431 4-394 (425)
16 1a9x_A Carbamoyl phosphate syn 100.0 6.7E-44 2.3E-48 441.3 34.5 386 34-452 4-432 (1073)
17 1kjq_A GART 2, phosphoribosylg 100.0 1.5E-42 5.3E-47 385.3 41.7 359 36-431 10-370 (391)
18 4ffl_A PYLC; amino acid, biosy 100.0 2.6E-43 9.1E-48 388.0 31.1 337 37-431 1-338 (363)
19 2dwc_A PH0318, 433AA long hypo 100.0 3.5E-42 1.2E-46 388.0 37.2 371 30-431 12-394 (433)
20 4e4t_A Phosphoribosylaminoimid 100.0 7.9E-41 2.7E-45 375.0 38.1 308 36-378 34-349 (419)
21 3aw8_A PURK, phosphoribosylami 100.0 1.1E-40 3.8E-45 367.9 37.6 342 39-431 1-343 (369)
22 3k5i_A Phosphoribosyl-aminoimi 100.0 1.1E-40 3.7E-45 372.4 36.2 314 37-379 24-340 (403)
23 3vmm_A Alanine-anticapsin liga 100.0 2.5E-40 8.6E-45 376.1 30.7 374 61-452 52-465 (474)
24 3ax6_A Phosphoribosylaminoimid 100.0 3E-39 1E-43 357.8 38.1 347 37-431 1-351 (380)
25 3q2o_A Phosphoribosylaminoimid 100.0 1.5E-38 5.3E-43 353.4 40.2 296 36-359 13-309 (389)
26 3orq_A N5-carboxyaminoimidazol 100.0 3.5E-38 1.2E-42 349.2 36.5 311 35-378 10-321 (377)
27 3eth_A Phosphoribosylaminoimid 100.0 3E-38 1E-42 345.7 32.9 286 37-379 1-289 (355)
28 2yw2_A Phosphoribosylamine--gl 100.0 5.2E-38 1.8E-42 352.9 35.2 354 39-431 2-386 (424)
29 2qk4_A Trifunctional purine bi 100.0 4.3E-38 1.5E-42 356.6 32.8 362 32-431 19-415 (452)
30 2ip4_A PURD, phosphoribosylami 100.0 5.6E-37 1.9E-41 343.9 37.5 347 39-431 2-379 (417)
31 2z04_A Phosphoribosylaminoimid 100.0 1.3E-37 4.3E-42 342.8 28.3 337 37-431 1-338 (365)
32 1a9x_A Carbamoyl phosphate syn 100.0 2.6E-36 9.1E-41 373.4 37.5 341 36-395 558-921 (1073)
33 2yrx_A Phosphoribosylglycinami 100.0 1.4E-35 4.6E-40 336.0 36.7 294 37-358 21-339 (451)
34 1vkz_A Phosphoribosylamine--gl 100.0 2.1E-36 7.3E-41 338.7 29.5 352 36-431 14-382 (412)
35 3lp8_A Phosphoribosylamine-gly 100.0 1.9E-35 6.5E-40 333.7 35.5 305 31-358 15-339 (442)
36 2xcl_A Phosphoribosylamine--gl 100.0 1.6E-35 5.4E-40 332.5 33.9 291 39-357 2-317 (422)
37 3mjf_A Phosphoribosylamine--gl 100.0 5.9E-35 2E-39 328.7 35.5 319 37-382 3-350 (431)
38 4fu0_A D-alanine--D-alanine li 100.0 1.4E-36 4.7E-41 333.9 16.4 304 37-351 3-343 (357)
39 2pn1_A Carbamoylphosphate synt 100.0 1.3E-34 4.3E-39 314.2 30.4 294 35-359 2-301 (331)
40 4eg0_A D-alanine--D-alanine li 100.0 7.8E-34 2.7E-38 306.8 27.0 285 29-352 5-311 (317)
41 1ehi_A LMDDL2, D-alanine:D-lac 100.0 9.1E-33 3.1E-37 305.7 29.1 302 38-355 4-354 (377)
42 3e5n_A D-alanine-D-alanine lig 100.0 1.6E-33 5.6E-38 312.2 20.9 304 34-351 19-365 (386)
43 3i12_A D-alanine-D-alanine lig 100.0 4.2E-32 1.4E-36 298.9 30.0 289 49-351 24-346 (364)
44 2i87_A D-alanine-D-alanine lig 100.0 5.8E-33 2E-37 305.8 21.5 299 37-351 3-337 (364)
45 1iow_A DD-ligase, DDLB, D-ALA\ 100.0 1.1E-31 3.7E-36 287.4 27.8 273 36-352 1-302 (306)
46 3k3p_A D-alanine--D-alanine li 100.0 7.3E-32 2.5E-36 298.3 26.9 300 38-351 38-367 (383)
47 3lwb_A D-alanine--D-alanine li 100.0 3.2E-32 1.1E-36 300.7 22.4 237 108-354 108-367 (373)
48 3tqt_A D-alanine--D-alanine li 100.0 1.3E-31 4.6E-36 295.2 23.7 290 49-351 25-347 (372)
49 3r5x_A D-alanine--D-alanine li 100.0 5.8E-31 2E-35 282.5 24.0 270 39-352 5-295 (307)
50 1e4e_A Vancomycin/teicoplanin 100.0 4.5E-32 1.6E-36 296.2 15.3 297 37-352 3-337 (343)
51 3se7_A VANA; alpha-beta struct 100.0 5.3E-31 1.8E-35 288.2 21.5 289 48-351 23-336 (346)
52 2fb9_A D-alanine:D-alanine lig 100.0 8.2E-31 2.8E-35 283.9 22.6 288 38-352 4-317 (322)
53 2pvp_A D-alanine-D-alanine lig 100.0 2.8E-29 9.6E-34 276.4 24.0 233 109-358 107-350 (367)
54 1uc8_A LYSX, lysine biosynthes 100.0 6.6E-29 2.3E-33 261.9 21.8 272 40-355 2-278 (280)
55 2r85_A PURP protein PF1517; AT 100.0 5.6E-27 1.9E-31 253.9 27.5 264 38-333 3-292 (334)
56 2r7k_A 5-formaminoimidazole-4- 99.9 6.7E-26 2.3E-30 247.9 25.3 271 38-335 19-321 (361)
57 2pbz_A Hypothetical protein; N 99.9 1.9E-25 6.4E-30 240.1 10.5 263 39-347 4-293 (320)
58 3df7_A Putative ATP-grAsp supe 99.9 4.2E-24 1.4E-28 229.5 18.1 209 99-351 61-271 (305)
59 1gsa_A Glutathione synthetase; 99.9 9.5E-21 3.2E-25 202.8 21.5 284 38-354 2-311 (316)
60 1z2n_X Inositol 1,3,4-trisphos 99.8 2.1E-20 7.1E-25 201.8 16.6 238 38-330 12-300 (324)
61 3ln7_A Glutathione biosynthesi 99.8 3.7E-21 1.3E-25 227.5 11.3 241 96-354 433-754 (757)
62 1wr2_A Hypothetical protein PH 99.8 8.7E-19 3E-23 181.3 11.9 177 148-330 19-218 (238)
63 3ln6_A Glutathione biosynthesi 99.8 3.8E-19 1.3E-23 210.9 10.4 244 96-353 428-747 (750)
64 1i7n_A Synapsin II; synapse, p 99.7 1.5E-16 5.3E-21 169.5 22.6 219 109-352 68-303 (309)
65 2p0a_A Synapsin-3, synapsin II 99.7 2.4E-16 8.2E-21 170.0 20.9 221 109-354 85-322 (344)
66 1pk8_A RAT synapsin I; ATP bin 99.7 3.8E-16 1.3E-20 171.2 22.0 219 109-352 180-415 (422)
67 2q7d_A Inositol-tetrakisphosph 99.7 1.2E-15 4E-20 166.1 21.4 231 47-330 33-312 (346)
68 2cqy_A Propionyl-COA carboxyla 99.6 3.5E-17 1.2E-21 147.3 3.2 104 146-249 4-107 (108)
69 2kcc_A Acetyl-COA carboxylase 99.6 2.2E-15 7.6E-20 129.8 8.0 73 648-721 4-76 (84)
70 2dn8_A Acetyl-COA carboxylase 99.5 1.9E-14 6.4E-19 128.2 9.5 74 647-721 15-88 (100)
71 1z6h_A Biotin/lipoyl attachmen 99.5 2.8E-14 9.5E-19 119.0 8.5 70 651-720 1-70 (72)
72 3crk_C Dihydrolipoyllysine-res 99.5 3.9E-14 1.3E-18 122.9 9.0 68 654-721 16-84 (87)
73 1bdo_A Acetyl-COA carboxylase; 99.5 2.2E-14 7.6E-19 122.3 7.3 69 650-718 5-80 (80)
74 1k8m_A E2 component of branche 99.5 3.9E-14 1.3E-18 124.4 7.3 70 655-724 16-85 (93)
75 1dcz_A Transcarboxylase 1.3S s 99.5 1.5E-13 5E-18 116.2 9.9 73 646-718 5-77 (77)
76 1ghj_A E2, E2, the dihydrolipo 99.5 5.1E-14 1.8E-18 119.8 7.1 68 653-720 11-78 (79)
77 3bg3_A Pyruvate carboxylase, m 99.5 7.1E-14 2.4E-18 163.8 9.9 72 646-717 646-717 (718)
78 2dnc_A Pyruvate dehydrogenase 99.5 9.8E-14 3.4E-18 123.0 8.0 68 655-722 19-87 (98)
79 2d5d_A Methylmalonyl-COA decar 99.4 2.6E-13 8.9E-18 113.6 9.2 70 649-718 5-74 (74)
80 2jku_A Propionyl-COA carboxyla 99.4 4E-14 1.4E-18 124.6 3.7 73 646-718 22-94 (94)
81 2l5t_A Lipoamide acyltransfera 99.4 1.2E-13 4.2E-18 116.8 6.4 66 653-718 11-76 (77)
82 2dne_A Dihydrolipoyllysine-res 99.4 1.8E-13 6.2E-18 123.3 7.4 67 655-721 19-86 (108)
83 1y8o_B Dihydrolipoyllysine-res 99.4 3.4E-13 1.2E-17 124.7 8.9 66 656-721 40-106 (128)
84 2ejm_A Methylcrotonoyl-COA car 99.4 3.6E-13 1.2E-17 119.7 8.6 76 647-722 12-87 (99)
85 2fp4_B Succinyl-COA ligase [GD 99.4 2.8E-13 9.5E-18 149.4 9.1 169 150-330 4-210 (395)
86 2qf7_A Pyruvate carboxylase pr 99.4 8.1E-13 2.8E-17 163.8 12.8 105 610-718 1060-1164(1165)
87 2nu8_B SCS-beta, succinyl-COA 99.4 3.6E-13 1.2E-17 148.4 8.6 169 150-330 4-203 (388)
88 1gjx_A Pyruvate dehydrogenase; 99.4 1.2E-13 4.3E-18 117.9 3.4 70 652-721 10-79 (81)
89 2k7v_A Dihydrolipoyllysine-res 99.4 8.6E-14 2.9E-18 120.2 1.9 71 651-721 4-74 (85)
90 1qjo_A Dihydrolipoamide acetyl 99.4 6.5E-13 2.2E-17 113.1 6.7 65 657-721 14-78 (80)
91 3t7a_A Inositol pyrophosphate 99.4 2.7E-13 9.4E-18 141.0 4.5 202 110-332 58-293 (330)
92 1iyu_A E2P, dihydrolipoamide a 99.3 1.8E-12 6E-17 110.2 8.0 64 657-721 13-76 (79)
93 3va7_A KLLA0E08119P; carboxyla 99.3 1.2E-12 4.1E-17 162.4 9.9 70 648-717 1166-1235(1236)
94 1pmr_A Dihydrolipoyl succinylt 99.3 6.1E-14 2.1E-18 119.6 -3.3 65 655-719 14-78 (80)
95 1zko_A Glycine cleavage system 99.1 3.5E-11 1.2E-15 112.1 5.7 72 651-722 38-117 (136)
96 3ufx_B Succinyl-COA synthetase 99.1 1E-09 3.4E-14 121.2 15.2 103 150-254 4-110 (397)
97 3dva_I Dihydrolipoyllysine-res 99.0 3.5E-11 1.2E-15 133.9 0.0 65 657-721 16-80 (428)
98 2k32_A A; NMR {Campylobacter j 99.0 2.7E-10 9.2E-15 104.0 5.1 71 651-721 3-103 (116)
99 1zy8_K Pyruvate dehydrogenase 99.0 5.7E-11 1.9E-15 121.0 0.0 65 656-720 16-81 (229)
100 1hpc_A H protein of the glycin 98.8 2.9E-09 1E-13 98.7 5.1 70 652-721 30-107 (131)
101 1onl_A Glycine cleavage system 98.7 2.5E-08 8.6E-13 92.1 7.8 71 652-722 30-108 (128)
102 3a7l_A H-protein, glycine clea 98.6 2.8E-08 9.7E-13 91.7 5.9 71 652-722 31-109 (128)
103 3ne5_B Cation efflux system pr 98.2 2.4E-06 8.1E-11 95.1 8.2 71 650-720 122-241 (413)
104 3lnn_A Membrane fusion protein 98.1 2.2E-06 7.7E-11 93.2 6.6 73 649-721 57-206 (359)
105 2f1m_A Acriflavine resistance 98.1 7.1E-07 2.4E-11 93.6 2.2 72 650-721 23-167 (277)
106 3fpp_A Macrolide-specific effl 98.1 2.6E-06 8.9E-11 92.0 5.8 72 649-720 31-190 (341)
107 3klr_A Glycine cleavage system 98.0 7.5E-06 2.6E-10 74.8 6.9 67 655-721 29-103 (125)
108 1vf7_A Multidrug resistance pr 97.9 3.7E-06 1.3E-10 92.0 2.4 72 650-721 44-174 (369)
109 3mxu_A Glycine cleavage system 97.8 3E-05 1E-09 72.1 6.7 66 656-721 52-125 (143)
110 3tzu_A GCVH, glycine cleavage 97.8 2.5E-05 8.5E-10 72.4 6.0 49 655-703 46-95 (137)
111 1ax3_A Iiaglc, glucose permeas 97.7 2.9E-05 1E-09 74.3 4.6 70 646-719 9-117 (162)
112 4dk0_A Putative MACA; alpha-ha 97.6 3.2E-06 1.1E-10 92.3 -2.9 72 648-719 31-190 (369)
113 3tig_A TTL protein; ATP-grAsp, 97.6 0.00045 1.5E-08 75.1 13.7 155 187-358 147-363 (380)
114 1f3z_A EIIA-GLC, glucose-speci 97.5 7.2E-05 2.5E-09 71.4 4.4 66 650-719 13-117 (161)
115 2gpr_A Glucose-permease IIA co 97.4 6.9E-05 2.4E-09 71.1 3.8 66 650-719 8-112 (154)
116 3cdx_A Succinylglutamatedesucc 97.4 0.00033 1.1E-08 76.0 9.1 68 650-720 268-339 (354)
117 3hgb_A Glycine cleavage system 97.4 0.00026 9E-09 66.6 6.7 66 656-721 57-130 (155)
118 3na6_A Succinylglutamate desuc 97.2 0.00078 2.7E-08 72.4 9.7 71 647-720 255-329 (331)
119 3mwd_A ATP-citrate synthase; A 96.9 0.0011 3.7E-08 73.4 6.4 110 151-260 8-135 (425)
120 3fmc_A Putative succinylglutam 96.7 0.0029 9.9E-08 68.9 8.7 69 649-720 290-364 (368)
121 2dn8_A Acetyl-COA carboxylase 96.7 0.00076 2.6E-08 59.3 3.1 48 674-721 5-52 (100)
122 3pff_A ATP-citrate synthase; p 96.5 0.0024 8.2E-08 75.9 6.7 110 151-260 8-135 (829)
123 1z6h_A Biotin/lipoyl attachmen 95.9 0.0097 3.3E-07 48.4 5.3 38 688-725 1-38 (72)
124 2l5t_A Lipoamide acyltransfera 95.9 0.0066 2.3E-07 50.3 4.2 33 650-682 45-77 (77)
125 1bdo_A Acetyl-COA carboxylase; 95.8 0.0057 1.9E-07 51.1 3.5 32 650-681 49-80 (80)
126 2d5d_A Methylmalonyl-COA decar 95.7 0.015 5.3E-07 47.4 5.9 38 687-724 6-43 (74)
127 3ic5_A Putative saccharopine d 95.6 0.033 1.1E-06 49.0 8.1 94 36-139 4-98 (118)
128 2kcc_A Acetyl-COA carboxylase 95.6 0.0065 2.2E-07 51.4 3.0 35 688-722 7-41 (84)
129 1dcz_A Transcarboxylase 1.3S s 95.4 0.022 7.4E-07 47.0 5.8 37 687-723 9-45 (77)
130 1iyu_A E2P, dihydrolipoamide a 95.4 0.011 3.7E-07 49.2 3.9 33 650-682 42-74 (79)
131 1qjo_A Dihydrolipoamide acetyl 95.4 0.0068 2.3E-07 50.6 2.6 34 649-682 43-76 (80)
132 3i6i_A Putative leucoanthocyan 95.4 0.14 4.9E-06 54.4 13.6 95 37-138 10-115 (346)
133 2qj8_A MLR6093 protein; struct 95.3 0.036 1.2E-06 59.4 8.7 67 651-720 259-329 (332)
134 1ghj_A E2, E2, the dihydrolipo 95.1 0.014 4.6E-07 48.6 3.4 33 650-682 45-77 (79)
135 2k32_A A; NMR {Campylobacter j 95.0 0.019 6.4E-07 51.5 4.5 34 687-720 2-35 (116)
136 2k7v_A Dihydrolipoyllysine-res 94.9 0.011 3.6E-07 50.1 2.4 35 649-683 39-73 (85)
137 3fwz_A Inner membrane protein 94.8 0.05 1.7E-06 50.3 7.0 78 34-119 4-81 (140)
138 1k8m_A E2 component of branche 94.8 0.022 7.6E-07 49.1 4.2 33 650-682 48-80 (93)
139 3llv_A Exopolyphosphatase-rela 94.7 0.023 8E-07 52.3 4.4 91 36-134 5-95 (141)
140 2gpr_A Glucose-permease IIA co 94.6 0.027 9.2E-07 53.3 4.6 65 650-717 45-153 (154)
141 3our_B EIIA, phosphotransferas 94.3 0.039 1.3E-06 53.2 4.9 67 649-719 34-139 (183)
142 3crk_C Dihydrolipoyllysine-res 94.3 0.028 9.5E-07 47.8 3.5 33 650-682 49-82 (87)
143 3r6d_A NAD-dependent epimerase 94.1 0.41 1.4E-05 47.2 12.4 92 35-135 3-100 (221)
144 3qvo_A NMRA family protein; st 94.1 0.2 6.7E-06 50.3 10.1 77 32-117 18-96 (236)
145 1ax3_A Iiaglc, glucose permeas 93.8 0.028 9.4E-07 53.6 2.9 18 664-681 99-116 (162)
146 1f3z_A EIIA-GLC, glucose-speci 93.8 0.074 2.5E-06 50.6 5.8 32 650-681 50-116 (161)
147 3n6r_A Propionyl-COA carboxyla 93.8 0.11 3.7E-06 61.1 8.4 32 650-681 650-681 (681)
148 2ejm_A Methylcrotonoyl-COA car 93.7 0.05 1.7E-06 47.4 4.0 37 686-722 14-50 (99)
149 1hdo_A Biliverdin IX beta redu 93.7 0.72 2.4E-05 44.4 13.0 72 38-118 4-76 (206)
150 2g1u_A Hypothetical protein TM 93.7 0.31 1.1E-05 45.5 9.9 36 36-71 18-53 (155)
151 3nkl_A UDP-D-quinovosamine 4-d 93.5 0.36 1.2E-05 44.2 9.9 95 37-143 4-102 (141)
152 2jku_A Propionyl-COA carboxyla 93.5 0.032 1.1E-06 48.2 2.5 35 687-721 26-60 (94)
153 1pmr_A Dihydrolipoyl succinylt 93.5 0.016 5.5E-07 48.4 0.5 34 649-682 45-78 (80)
154 2duw_A Putative COA-binding pr 93.5 0.42 1.4E-05 44.5 10.3 99 38-144 14-127 (145)
155 2dne_A Dihydrolipoyllysine-res 93.3 0.08 2.7E-06 47.0 4.8 42 682-723 3-50 (108)
156 2r6j_A Eugenol synthase 1; phe 93.3 0.39 1.3E-05 50.2 11.0 121 36-165 10-150 (318)
157 2hmt_A YUAA protein; RCK, KTN, 93.3 0.12 4E-06 47.0 6.1 34 36-69 5-38 (144)
158 2dnc_A Pyruvate dehydrogenase 93.1 0.044 1.5E-06 47.7 2.7 34 650-683 51-85 (98)
159 1gjx_A Pyruvate dehydrogenase; 93.0 0.019 6.5E-07 48.0 0.1 33 650-682 45-77 (81)
160 1y8o_B Dihydrolipoyllysine-res 92.9 0.17 5.8E-06 46.3 6.4 31 693-723 40-70 (128)
161 3m2p_A UDP-N-acetylglucosamine 92.7 0.71 2.4E-05 48.0 12.0 88 36-136 1-102 (311)
162 1y81_A Conserved hypothetical 92.7 0.61 2.1E-05 43.0 10.1 99 38-144 15-126 (138)
163 3fpp_A Macrolide-specific effl 92.7 0.075 2.6E-06 56.7 4.4 59 662-721 8-66 (341)
164 2xha_A NUSG, transcription ant 92.6 0.096 3.3E-06 51.0 4.5 48 662-715 22-98 (193)
165 2f1m_A Acriflavine resistance 92.5 0.088 3E-06 54.4 4.5 47 674-721 11-57 (277)
166 2d59_A Hypothetical protein PH 92.4 0.86 3E-05 42.3 10.8 101 37-145 22-135 (144)
167 3d4r_A Domain of unknown funct 91.6 0.22 7.5E-06 46.9 5.5 52 652-703 103-155 (169)
168 3our_B EIIA, phosphotransferas 91.5 0.25 8.6E-06 47.6 6.0 26 656-681 113-138 (183)
169 3u9t_A MCC alpha, methylcroton 91.4 0.14 4.7E-06 60.2 5.0 34 649-682 639-672 (675)
170 3ff4_A Uncharacterized protein 91.0 0.91 3.1E-05 41.0 9.0 98 37-142 4-113 (122)
171 3slg_A PBGP3 protein; structur 90.9 0.71 2.4E-05 49.3 9.7 73 35-116 22-98 (372)
172 3lnn_A Membrane fusion protein 90.9 0.11 3.6E-06 56.0 3.1 62 660-721 30-92 (359)
173 1iuk_A Hypothetical protein TT 90.9 0.72 2.4E-05 42.6 8.4 101 37-145 13-128 (140)
174 2io8_A Bifunctional glutathion 90.8 0.73 2.5E-05 53.2 10.1 99 125-241 474-574 (619)
175 3dhn_A NAD-dependent epimerase 90.5 0.64 2.2E-05 45.7 8.3 71 37-117 4-75 (227)
176 3o9z_A Lipopolysaccaride biosy 90.5 1.6 5.6E-05 45.8 11.9 92 37-138 3-100 (312)
177 3s2u_A UDP-N-acetylglucosamine 90.4 0.97 3.3E-05 48.5 10.2 101 36-138 1-119 (365)
178 1qyd_A Pinoresinol-lariciresin 90.2 1.1 3.9E-05 46.2 10.3 122 37-165 4-152 (313)
179 2c20_A UDP-glucose 4-epimerase 90.1 0.99 3.4E-05 47.1 9.8 73 37-118 1-76 (330)
180 1qyc_A Phenylcoumaran benzylic 90.1 1.2 4E-05 46.0 10.2 93 37-136 4-107 (308)
181 3orf_A Dihydropteridine reduct 89.8 1.1 3.6E-05 45.3 9.4 78 28-118 13-96 (251)
182 3sc6_A DTDP-4-dehydrorhamnose 89.7 0.82 2.8E-05 46.8 8.6 60 37-118 4-65 (287)
183 1n7h_A GDP-D-mannose-4,6-dehyd 89.6 1.5 5E-05 47.0 10.9 77 35-118 26-115 (381)
184 3c1o_A Eugenol synthase; pheny 89.5 1.8 6.2E-05 45.0 11.3 121 36-165 3-148 (321)
185 2gas_A Isoflavone reductase; N 89.2 1.4 4.9E-05 45.3 10.1 119 37-165 2-147 (307)
186 4egb_A DTDP-glucose 4,6-dehydr 88.9 3.2 0.00011 43.5 12.8 73 37-117 24-106 (346)
187 2xhc_A Transcription antitermi 88.8 0.34 1.2E-05 52.0 4.8 48 662-715 62-138 (352)
188 3n6x_A Putative glutathionylsp 88.6 0.84 2.9E-05 50.9 8.0 70 162-240 340-411 (474)
189 1id1_A Putative potassium chan 88.6 0.66 2.3E-05 43.1 6.3 89 37-132 3-94 (153)
190 4ea9_A Perosamine N-acetyltran 88.6 1.3 4.5E-05 43.8 8.8 34 36-69 11-44 (220)
191 2c5a_A GDP-mannose-3', 5'-epim 88.5 2.4 8.2E-05 45.4 11.6 74 36-118 28-102 (379)
192 1vf7_A Multidrug resistance pr 88.4 0.22 7.4E-06 53.9 3.1 58 663-721 21-78 (369)
193 2q1w_A Putative nucleotide sug 88.3 1.7 5.6E-05 45.7 9.9 76 36-118 20-98 (333)
194 4ina_A Saccharopine dehydrogen 88.2 1 3.5E-05 49.3 8.5 122 37-169 1-140 (405)
195 1t2a_A GDP-mannose 4,6 dehydra 88.2 2.3 7.9E-05 45.3 11.1 79 35-118 22-111 (375)
196 3ne5_B Cation efflux system pr 87.8 0.44 1.5E-05 52.4 5.2 59 663-721 97-157 (413)
197 3f8d_A Thioredoxin reductase ( 87.6 0.74 2.5E-05 47.5 6.6 35 35-69 13-47 (323)
198 2x4g_A Nucleoside-diphosphate- 87.6 1.8 6.1E-05 45.3 9.7 67 39-117 15-85 (342)
199 1rpn_A GDP-mannose 4,6-dehydra 87.5 1.9 6.4E-05 45.1 9.7 79 33-118 10-95 (335)
200 2xha_A NUSG, transcription ant 87.3 0.11 3.6E-06 50.7 -0.2 47 664-716 84-158 (193)
201 2yy7_A L-threonine dehydrogena 87.0 1.1 3.7E-05 46.4 7.4 74 36-118 1-77 (312)
202 2pzm_A Putative nucleotide sug 86.9 2.2 7.6E-05 44.6 9.9 74 38-118 21-97 (330)
203 3enk_A UDP-glucose 4-epimerase 86.8 2.2 7.5E-05 44.6 9.8 76 37-117 5-86 (341)
204 3l9w_A Glutathione-regulated p 86.8 0.3 1E-05 53.8 3.0 35 38-72 5-39 (413)
205 2wm3_A NMRA-like family domain 86.7 1.6 5.4E-05 45.0 8.4 73 37-118 5-81 (299)
206 3l4b_C TRKA K+ channel protien 86.7 0.66 2.3E-05 45.8 5.3 87 39-132 2-88 (218)
207 3oa2_A WBPB; oxidoreductase, s 86.2 4.5 0.00016 42.4 11.8 92 37-138 3-101 (318)
208 3rft_A Uronate dehydrogenase; 86.2 1.3 4.3E-05 45.1 7.3 71 36-118 2-73 (267)
209 4id9_A Short-chain dehydrogena 86.0 1.3 4.4E-05 46.6 7.5 66 36-116 18-84 (347)
210 1p9l_A Dihydrodipicolinate red 85.9 3.8 0.00013 41.6 10.5 92 39-136 2-98 (245)
211 3hbl_A Pyruvate carboxylase; T 85.6 1.1 3.8E-05 55.6 7.5 131 585-720 1014-1148(1150)
212 1ek6_A UDP-galactose 4-epimera 85.6 1.9 6.5E-05 45.3 8.6 76 36-118 1-90 (348)
213 3c85_A Putative glutathione-re 85.4 0.71 2.4E-05 44.1 4.7 34 37-70 39-73 (183)
214 2pk3_A GDP-6-deoxy-D-LYXO-4-he 85.4 3.6 0.00012 42.5 10.5 72 36-118 11-83 (321)
215 2ydy_A Methionine adenosyltran 85.1 1.2 4E-05 46.2 6.6 67 36-117 1-68 (315)
216 4dk0_A Putative MACA; alpha-ha 85.0 0.12 4.2E-06 55.6 -1.2 56 665-721 12-67 (369)
217 3dfz_A SIRC, precorrin-2 dehyd 84.9 0.79 2.7E-05 46.0 4.8 33 37-69 31-63 (223)
218 3ruf_A WBGU; rossmann fold, UD 84.7 1.9 6.5E-05 45.4 8.1 74 36-118 24-109 (351)
219 1lss_A TRK system potassium up 84.7 1.2 4.1E-05 39.9 5.6 32 38-69 5-36 (140)
220 3ay3_A NAD-dependent epimerase 84.6 0.87 3E-05 46.2 5.1 71 36-118 1-72 (267)
221 3ius_A Uncharacterized conserv 84.6 0.73 2.5E-05 47.1 4.5 35 36-70 4-38 (286)
222 1e6u_A GDP-fucose synthetase; 84.4 1.7 5.9E-05 45.0 7.4 61 37-118 3-64 (321)
223 3pdi_B Nitrogenase MOFE cofact 84.1 4 0.00014 45.4 10.6 85 37-138 313-397 (458)
224 2dkn_A 3-alpha-hydroxysteroid 83.8 1.6 5.5E-05 43.4 6.7 68 37-118 1-71 (255)
225 1uay_A Type II 3-hydroxyacyl-C 83.8 4.4 0.00015 39.9 9.9 69 36-117 1-74 (242)
226 2jl1_A Triphenylmethane reduct 83.7 1.8 6.2E-05 44.0 7.1 88 38-135 1-99 (287)
227 3dqp_A Oxidoreductase YLBE; al 83.4 4.6 0.00016 39.3 9.8 69 39-119 2-73 (219)
228 1rkx_A CDP-glucose-4,6-dehydra 83.4 3.4 0.00012 43.6 9.4 75 37-118 9-89 (357)
229 3uuw_A Putative oxidoreductase 83.3 2.1 7.1E-05 44.6 7.5 87 37-138 6-94 (308)
230 1orr_A CDP-tyvelose-2-epimeras 83.2 3.5 0.00012 43.0 9.4 75 37-118 1-82 (347)
231 2we8_A Xanthine dehydrogenase; 83.2 6.2 0.00021 42.8 11.3 35 37-71 204-238 (386)
232 3abi_A Putative uncharacterize 82.9 2 6.8E-05 46.1 7.3 114 39-168 18-131 (365)
233 1db3_A GDP-mannose 4,6-dehydra 82.3 4.4 0.00015 42.9 9.8 76 37-117 1-86 (372)
234 3sxp_A ADP-L-glycero-D-mannohe 82.2 5.4 0.00018 42.2 10.4 74 37-118 10-99 (362)
235 2auk_A DNA-directed RNA polyme 81.8 1.2 4.1E-05 43.4 4.6 45 663-709 64-108 (190)
236 2q1s_A Putative nucleotide sug 81.7 2.9 9.9E-05 44.7 8.1 75 37-118 32-108 (377)
237 3lu0_D DNA-directed RNA polyme 81.7 1.6 5.3E-05 53.9 6.3 35 662-698 1002-1036(1407)
238 2z1m_A GDP-D-mannose dehydrata 81.6 5.4 0.00018 41.5 10.0 76 38-118 4-84 (345)
239 3ec7_A Putative dehydrogenase; 81.3 2.1 7.3E-05 45.7 6.8 144 34-194 20-174 (357)
240 3dii_A Short-chain dehydrogena 81.2 2 6.9E-05 43.1 6.2 76 36-118 1-84 (247)
241 1yde_A Retinal dehydrogenase/r 80.8 2.2 7.7E-05 43.5 6.5 75 37-118 9-91 (270)
242 3eag_A UDP-N-acetylmuramate:L- 80.8 5 0.00017 42.3 9.4 90 37-139 4-95 (326)
243 3db2_A Putative NADPH-dependen 80.6 2.5 8.7E-05 45.0 7.1 88 38-138 6-94 (354)
244 3m2t_A Probable dehydrogenase; 80.5 4.6 0.00016 43.1 9.1 89 38-138 6-96 (359)
245 2bco_A Succinylglutamate desuc 80.3 1.4 4.7E-05 47.3 4.8 75 651-732 265-342 (350)
246 3keo_A Redox-sensing transcrip 80.0 0.96 3.3E-05 45.0 3.2 89 37-138 84-176 (212)
247 2ywr_A Phosphoribosylglycinami 79.9 5 0.00017 39.8 8.4 77 37-118 1-90 (216)
248 3e48_A Putative nucleoside-dip 79.8 9.9 0.00034 38.5 11.1 71 39-118 2-74 (289)
249 3rih_A Short chain dehydrogena 79.3 3.6 0.00012 42.6 7.5 34 37-70 41-75 (293)
250 3gpi_A NAD-dependent epimerase 79.2 1.9 6.4E-05 44.1 5.3 35 37-71 3-37 (286)
251 3p19_A BFPVVD8, putative blue 79.0 3.3 0.00011 42.2 7.0 76 36-118 15-96 (266)
252 1vl0_A DTDP-4-dehydrorhamnose 78.9 3.4 0.00012 42.1 7.2 60 37-118 12-72 (292)
253 4hkt_A Inositol 2-dehydrogenas 78.8 4.6 0.00016 42.4 8.3 89 36-138 2-91 (331)
254 2axq_A Saccharopine dehydrogen 78.7 3 0.0001 46.5 7.1 90 36-138 22-116 (467)
255 4hv4_A UDP-N-acetylmuramate--L 78.6 5.6 0.00019 44.6 9.4 88 37-139 22-110 (494)
256 1sb8_A WBPP; epimerase, 4-epim 78.6 5.6 0.00019 41.8 9.0 73 37-118 27-111 (352)
257 2nm0_A Probable 3-oxacyl-(acyl 78.2 12 0.00039 37.7 10.8 70 37-118 21-96 (253)
258 3dva_I Dihydrolipoyllysine-res 77.9 0.45 1.5E-05 52.6 0.0 34 650-683 46-79 (428)
259 3qy9_A DHPR, dihydrodipicolina 77.6 7.5 0.00026 39.3 9.1 32 37-68 3-34 (243)
260 1xq6_A Unknown protein; struct 77.6 3.1 0.00011 41.1 6.3 73 36-118 3-78 (253)
261 2p5y_A UDP-glucose 4-epimerase 77.4 7.4 0.00025 40.0 9.3 72 39-117 2-74 (311)
262 3e18_A Oxidoreductase; dehydro 77.2 5.1 0.00017 42.8 8.2 87 38-138 6-93 (359)
263 4b8w_A GDP-L-fucose synthase; 77.2 4.7 0.00016 41.1 7.7 64 36-117 5-69 (319)
264 1yo6_A Putative carbonyl reduc 76.9 7.5 0.00026 38.2 8.9 75 37-118 3-90 (250)
265 1jw9_B Molybdopterin biosynthe 76.8 5.6 0.00019 40.2 8.0 32 37-68 31-63 (249)
266 3bg3_A Pyruvate carboxylase, m 76.8 2.1 7E-05 50.3 5.2 36 687-722 650-685 (718)
267 3upl_A Oxidoreductase; rossman 76.8 4.2 0.00014 45.0 7.4 148 38-192 24-188 (446)
268 2dc1_A L-aspartate dehydrogena 76.8 7.3 0.00025 38.8 8.7 103 39-164 2-104 (236)
269 3e82_A Putative oxidoreductase 76.7 7.8 0.00027 41.4 9.5 86 38-138 8-95 (364)
270 2rh8_A Anthocyanidin reductase 76.4 2.9 9.9E-05 43.7 5.9 38 33-70 5-43 (338)
271 3rjz_A N-type ATP pyrophosphat 76.3 15 0.0005 37.0 10.7 145 37-199 5-151 (237)
272 3kkj_A Amine oxidase, flavin-c 76.2 2.5 8.5E-05 41.1 5.0 33 37-69 2-34 (336)
273 2ehd_A Oxidoreductase, oxidore 76.2 2.9 9.9E-05 41.3 5.5 76 36-118 4-87 (234)
274 3tpc_A Short chain alcohol deh 76.0 15 0.0005 36.8 10.9 75 37-118 7-90 (257)
275 2aef_A Calcium-gated potassium 75.9 1.2 4E-05 44.5 2.4 88 37-134 9-96 (234)
276 3fbs_A Oxidoreductase; structu 75.8 2.7 9.2E-05 42.7 5.3 33 36-68 1-33 (297)
277 3auf_A Glycinamide ribonucleot 75.7 11 0.00038 37.7 9.6 78 37-119 22-112 (229)
278 1ff9_A Saccharopine reductase; 75.7 3.9 0.00013 45.4 6.8 89 37-138 3-96 (450)
279 2d1y_A Hypothetical protein TT 75.7 8.1 0.00028 38.7 8.8 74 37-118 6-86 (256)
280 2cfc_A 2-(R)-hydroxypropyl-COM 75.7 5.2 0.00018 39.7 7.3 34 36-69 1-35 (250)
281 4b79_A PA4098, probable short- 75.4 17 0.0006 36.5 11.1 72 38-116 12-85 (242)
282 2fwm_X 2,3-dihydro-2,3-dihydro 75.4 18 0.00063 35.9 11.4 71 37-118 7-83 (250)
283 1uzm_A 3-oxoacyl-[acyl-carrier 75.3 13 0.00045 37.0 10.2 70 37-118 15-90 (247)
284 4ew6_A D-galactose-1-dehydroge 75.2 18 0.00062 37.9 11.8 81 38-138 26-109 (330)
285 1zy8_K Pyruvate dehydrogenase 75.0 0.6 2E-05 47.1 0.0 33 650-682 47-80 (229)
286 3q2i_A Dehydrogenase; rossmann 75.0 9.3 0.00032 40.5 9.5 89 37-138 13-103 (354)
287 3l6e_A Oxidoreductase, short-c 75.0 4.8 0.00016 40.0 6.8 33 37-69 3-36 (235)
288 3lk7_A UDP-N-acetylmuramoylala 74.9 8.2 0.00028 42.6 9.3 93 37-144 9-105 (451)
289 3ohs_X Trans-1,2-dihydrobenzen 74.9 3.7 0.00013 43.3 6.2 91 36-138 1-94 (334)
290 3k31_A Enoyl-(acyl-carrier-pro 74.8 6.4 0.00022 40.6 7.9 33 37-69 30-65 (296)
291 3on5_A BH1974 protein; structu 74.4 4.5 0.00015 43.4 6.6 105 37-159 199-305 (362)
292 3kux_A Putative oxidoreductase 74.2 13 0.00044 39.4 10.3 86 38-138 8-95 (352)
293 3vtz_A Glucose 1-dehydrogenase 74.2 17 0.00057 36.8 10.8 71 37-118 14-90 (269)
294 3e9m_A Oxidoreductase, GFO/IDH 74.2 6 0.0002 41.6 7.6 90 37-138 5-95 (330)
295 3q0i_A Methionyl-tRNA formyltr 74.1 4.6 0.00016 42.6 6.6 36 38-73 8-43 (318)
296 3un1_A Probable oxidoreductase 74.1 16 0.00055 36.7 10.6 72 37-118 28-105 (260)
297 3evn_A Oxidoreductase, GFO/IDH 74.0 7.5 0.00026 40.8 8.3 90 37-138 5-95 (329)
298 4had_A Probable oxidoreductase 74.0 6.2 0.00021 41.7 7.8 90 37-138 23-114 (350)
299 1fjh_A 3alpha-hydroxysteroid d 73.9 3.7 0.00013 41.0 5.7 68 37-118 1-71 (257)
300 2dtx_A Glucose 1-dehydrogenase 73.9 16 0.00054 36.9 10.5 70 37-118 8-83 (264)
301 3i4f_A 3-oxoacyl-[acyl-carrier 73.8 3.8 0.00013 41.2 5.8 76 36-118 6-94 (264)
302 3u7q_A Nitrogenase molybdenum- 73.7 5.6 0.00019 44.6 7.6 88 37-138 348-439 (492)
303 3itj_A Thioredoxin reductase 1 73.6 2.3 7.7E-05 44.2 4.1 38 32-69 17-54 (338)
304 3rc1_A Sugar 3-ketoreductase; 73.5 4.6 0.00016 43.0 6.6 89 37-138 27-117 (350)
305 3iup_A Putative NADPH:quinone 73.4 8 0.00027 41.5 8.5 76 37-118 171-249 (379)
306 1yb1_A 17-beta-hydroxysteroid 73.3 7.1 0.00024 39.6 7.7 33 37-69 31-64 (272)
307 3ezy_A Dehydrogenase; structur 73.2 3.5 0.00012 43.7 5.5 91 36-138 1-92 (344)
308 3ihm_A Styrene monooxygenase A 73.2 3.3 0.00011 45.4 5.4 34 36-69 21-54 (430)
309 3fhl_A Putative oxidoreductase 73.2 10 0.00034 40.4 9.2 86 38-138 6-93 (362)
310 3ehe_A UDP-glucose 4-epimerase 72.9 2.9 9.8E-05 43.2 4.7 30 37-67 1-31 (313)
311 3v5n_A Oxidoreductase; structu 72.8 12 0.00042 40.7 9.9 93 39-138 39-138 (417)
312 2o23_A HADH2 protein; HSD17B10 72.6 14 0.00048 36.8 9.7 75 37-118 12-95 (265)
313 3m1a_A Putative dehydrogenase; 72.6 8.9 0.0003 38.9 8.3 75 36-117 4-87 (281)
314 2bw0_A 10-FTHFDH, 10-formyltet 72.5 2.9 9.8E-05 44.4 4.6 35 38-72 23-57 (329)
315 3mtj_A Homoserine dehydrogenas 72.5 9.5 0.00033 42.1 8.9 111 39-165 12-132 (444)
316 3ak4_A NADH-dependent quinucli 72.4 9.2 0.00032 38.4 8.3 75 37-118 12-95 (263)
317 3rfo_A Methionyl-tRNA formyltr 72.1 6.3 0.00022 41.5 7.1 36 37-72 4-39 (317)
318 3awd_A GOX2181, putative polyo 71.8 7 0.00024 39.0 7.2 33 37-69 13-46 (260)
319 3ged_A Short-chain dehydrogena 71.7 5.3 0.00018 40.5 6.2 34 36-69 1-35 (247)
320 3ef6_A Toluene 1,2-dioxygenase 71.6 3.9 0.00013 44.4 5.5 35 36-70 1-37 (410)
321 1ooe_A Dihydropteridine reduct 71.4 14 0.00048 36.3 9.2 36 37-72 3-39 (236)
322 1mio_A Nitrogenase molybdenum 71.4 9.6 0.00033 43.1 8.8 32 37-68 335-366 (533)
323 3dfu_A Uncharacterized protein 71.3 4.7 0.00016 40.5 5.6 87 38-139 7-95 (232)
324 3c1a_A Putative oxidoreductase 71.3 3.4 0.00012 43.1 4.8 95 29-138 2-97 (315)
325 2z2v_A Hypothetical protein PH 71.3 4.5 0.00015 43.5 5.8 115 37-169 16-132 (365)
326 2rhc_B Actinorhodin polyketide 71.2 9 0.00031 39.0 8.0 33 37-69 22-55 (277)
327 3it5_A Protease LASA; metallop 71.1 6.1 0.00021 38.1 6.1 56 650-719 49-104 (182)
328 3i23_A Oxidoreductase, GFO/IDH 71.0 9.1 0.00031 40.5 8.2 92 36-139 1-94 (349)
329 2xdq_B Light-independent proto 70.9 14 0.00047 41.5 10.0 86 37-138 303-394 (511)
330 4gx0_A TRKA domain protein; me 70.8 7.3 0.00025 44.3 7.8 85 38-134 349-433 (565)
331 2bka_A CC3, TAT-interacting pr 70.6 5.3 0.00018 39.3 5.9 35 37-71 18-55 (242)
332 3ip3_A Oxidoreductase, putativ 70.6 3.5 0.00012 43.5 4.8 96 36-139 1-96 (337)
333 2xhc_A Transcription antitermi 70.5 0.69 2.4E-05 49.6 -0.8 47 664-716 124-198 (352)
334 1z45_A GAL10 bifunctional prot 70.3 11 0.00037 44.0 9.3 75 37-118 11-93 (699)
335 1n2s_A DTDP-4-, DTDP-glucose o 70.3 10 0.00035 38.6 8.1 61 39-118 2-63 (299)
336 1oc2_A DTDP-glucose 4,6-dehydr 70.3 19 0.00064 37.4 10.4 75 37-118 4-84 (348)
337 1pjq_A CYSG, siroheme synthase 70.1 6.4 0.00022 43.7 6.9 33 37-69 12-44 (457)
338 2ekp_A 2-deoxy-D-gluconate 3-d 70.0 17 0.00058 35.9 9.5 75 37-118 2-79 (239)
339 2zat_A Dehydrogenase/reductase 70.0 6 0.00021 39.7 6.2 33 37-69 14-47 (260)
340 1zud_1 Adenylyltransferase THI 69.8 17 0.0006 36.6 9.6 113 37-167 28-148 (251)
341 3d7l_A LIN1944 protein; APC893 69.6 13 0.00044 35.4 8.3 61 39-118 5-67 (202)
342 1geg_A Acetoin reductase; SDR 69.6 8.2 0.00028 38.7 7.1 34 36-69 1-35 (256)
343 3vps_A TUNA, NAD-dependent epi 69.6 4.6 0.00016 41.5 5.4 35 36-70 6-41 (321)
344 2x5o_A UDP-N-acetylmuramoylala 69.5 37 0.0013 37.1 12.9 87 38-139 6-93 (439)
345 4ezb_A Uncharacterized conserv 69.3 14 0.00047 38.7 9.0 35 36-70 23-58 (317)
346 1dhr_A Dihydropteridine reduct 69.2 20 0.00068 35.4 9.8 71 37-118 7-85 (241)
347 3tqq_A Methionyl-tRNA formyltr 69.1 6.4 0.00022 41.4 6.3 36 38-73 3-38 (314)
348 1gy8_A UDP-galactose 4-epimera 69.0 17 0.00059 38.6 10.0 73 39-118 4-102 (397)
349 2p91_A Enoyl-[acyl-carrier-pro 69.0 8.1 0.00028 39.4 7.0 32 38-69 22-56 (285)
350 3pdi_A Nitrogenase MOFE cofact 69.0 4.7 0.00016 45.1 5.5 88 37-138 332-423 (483)
351 3da8_A Probable 5'-phosphoribo 68.9 3.2 0.00011 41.3 3.7 78 36-119 11-100 (215)
352 1udb_A Epimerase, UDP-galactos 68.9 21 0.00073 36.9 10.4 73 39-118 2-82 (338)
353 4fb5_A Probable oxidoreductase 68.6 7.6 0.00026 41.4 7.0 89 39-139 27-123 (393)
354 3ajr_A NDP-sugar epimerase; L- 68.4 8.9 0.0003 39.4 7.3 68 39-118 1-71 (317)
355 3uf0_A Short-chain dehydrogena 68.3 14 0.00048 37.5 8.7 31 37-67 31-62 (273)
356 3afn_B Carbonyl reductase; alp 68.2 10 0.00036 37.5 7.5 77 37-118 7-94 (258)
357 2wsb_A Galactitol dehydrogenas 68.2 13 0.00044 36.8 8.2 75 37-118 11-94 (254)
358 1qsg_A Enoyl-[acyl-carrier-pro 68.0 5.6 0.00019 40.2 5.5 33 38-70 10-45 (265)
359 3gvx_A Glycerate dehydrogenase 67.9 24 0.00081 36.6 10.3 34 37-70 122-155 (290)
360 1mio_B Nitrogenase molybdenum 67.9 11 0.00038 41.7 8.2 86 37-138 312-407 (458)
361 2dt5_A AT-rich DNA-binding pro 67.8 3.1 0.00011 41.2 3.4 85 37-136 80-166 (211)
362 3d3w_A L-xylulose reductase; u 67.8 8.6 0.0003 37.9 6.8 75 37-118 7-85 (244)
363 1fmt_A Methionyl-tRNA FMet for 67.7 12 0.0004 39.4 8.0 35 38-72 4-38 (314)
364 2ywl_A Thioredoxin reductase r 67.7 5.8 0.0002 37.2 5.2 33 38-70 2-34 (180)
365 3doj_A AT3G25530, dehydrogenas 67.6 5.4 0.00018 41.6 5.4 40 29-68 13-52 (310)
366 3mz0_A Inositol 2-dehydrogenas 67.6 7.3 0.00025 41.1 6.5 147 36-194 1-153 (344)
367 2nu8_A Succinyl-COA ligase [AD 67.5 44 0.0015 34.3 12.3 105 37-164 7-117 (288)
368 1w6u_A 2,4-dienoyl-COA reducta 67.5 11 0.00038 38.5 7.7 33 37-69 26-59 (302)
369 3gem_A Short chain dehydrogena 67.5 8.6 0.00029 38.8 6.8 74 38-118 28-108 (260)
370 2bln_A Protein YFBG; transfera 67.4 9.5 0.00032 39.9 7.2 77 39-118 2-85 (305)
371 3op4_A 3-oxoacyl-[acyl-carrier 67.4 8.8 0.0003 38.4 6.8 75 37-118 9-92 (248)
372 1iy8_A Levodione reductase; ox 67.2 7.3 0.00025 39.3 6.2 33 37-69 13-46 (267)
373 1zko_A Glycine cleavage system 67.2 2.1 7.2E-05 39.4 1.8 33 650-682 75-114 (136)
374 2p2s_A Putative oxidoreductase 66.9 24 0.00081 36.9 10.3 89 38-138 5-94 (336)
375 3r1i_A Short-chain type dehydr 66.8 19 0.00066 36.5 9.3 75 37-118 32-118 (276)
376 2v6g_A Progesterone 5-beta-red 66.7 9.7 0.00033 39.9 7.3 73 38-118 2-81 (364)
377 1yxm_A Pecra, peroxisomal tran 66.6 13 0.00044 38.1 8.0 33 37-69 18-51 (303)
378 2ae2_A Protein (tropinone redu 66.5 14 0.00047 37.1 8.1 33 37-69 9-42 (260)
379 1yvv_A Amine oxidase, flavin-c 66.5 5.1 0.00018 41.5 5.0 34 36-69 1-34 (336)
380 1sny_A Sniffer CG10964-PA; alp 66.5 13 0.00044 37.2 7.8 36 36-71 20-59 (267)
381 4e6p_A Probable sorbitol dehyd 66.3 11 0.00036 37.9 7.2 75 37-118 8-91 (259)
382 2a87_A TRXR, TR, thioredoxin r 66.3 4.2 0.00015 42.4 4.3 32 36-67 13-44 (335)
383 3rd5_A Mypaa.01249.C; ssgcid, 66.2 8.5 0.00029 39.4 6.5 77 37-118 16-95 (291)
384 2hrz_A AGR_C_4963P, nucleoside 66.2 20 0.00067 37.2 9.5 74 37-118 14-95 (342)
385 2dq4_A L-threonine 3-dehydroge 66.1 5.8 0.0002 41.9 5.3 74 37-118 165-240 (343)
386 3o38_A Short chain dehydrogena 66.0 8.2 0.00028 38.8 6.3 33 37-69 22-56 (266)
387 4f3y_A DHPR, dihydrodipicolina 65.9 6.2 0.00021 40.6 5.3 92 37-138 7-101 (272)
388 3lxd_A FAD-dependent pyridine 65.7 5.4 0.00018 43.2 5.1 35 36-70 8-44 (415)
389 2bc0_A NADH oxidase; flavoprot 65.3 6.6 0.00022 43.7 5.8 34 36-69 34-70 (490)
390 2ag5_A DHRS6, dehydrogenase/re 65.2 11 0.00039 37.3 7.1 75 37-118 6-83 (246)
391 1oi7_A Succinyl-COA synthetase 65.1 16 0.00056 37.7 8.4 105 37-164 7-117 (288)
392 1e3j_A NADP(H)-dependent ketos 65.0 9.6 0.00033 40.3 6.8 77 37-118 169-249 (352)
393 4g65_A TRK system potassium up 65.0 3.6 0.00012 45.8 3.5 72 39-117 5-76 (461)
394 3rui_A Ubiquitin-like modifier 65.0 8.8 0.0003 40.8 6.4 31 37-67 34-64 (340)
395 3aek_B Light-independent proto 64.8 15 0.00053 41.4 8.8 86 37-138 280-371 (525)
396 3kvo_A Hydroxysteroid dehydrog 64.8 43 0.0015 35.3 11.9 35 37-71 45-80 (346)
397 3hyw_A Sulfide-quinone reducta 64.6 5.5 0.00019 43.5 4.9 33 36-68 1-35 (430)
398 3ijp_A DHPR, dihydrodipicolina 64.6 7.6 0.00026 40.3 5.7 92 37-138 21-116 (288)
399 1fmc_A 7 alpha-hydroxysteroid 64.6 8.5 0.00029 38.2 6.0 33 37-69 11-44 (255)
400 4g65_A TRK system potassium up 64.4 5.6 0.00019 44.2 5.0 36 35-71 233-268 (461)
401 3av3_A Phosphoribosylglycinami 64.3 15 0.0005 36.3 7.5 77 38-119 4-93 (212)
402 1nff_A Putative oxidoreductase 64.2 11 0.00037 38.0 6.7 75 37-118 7-90 (260)
403 2bgk_A Rhizome secoisolaricire 64.2 13 0.00044 37.4 7.4 33 37-69 16-49 (278)
404 3bfp_A Acetyltransferase; LEFT 64.1 4.9 0.00017 38.9 3.9 32 36-67 2-33 (194)
405 2ggs_A 273AA long hypothetical 63.6 17 0.00059 36.1 8.2 64 39-118 2-66 (273)
406 2q2v_A Beta-D-hydroxybutyrate 63.5 15 0.0005 36.7 7.6 34 37-70 4-38 (255)
407 3uog_A Alcohol dehydrogenase; 63.5 5.6 0.00019 42.4 4.6 77 36-118 189-266 (363)
408 1xg5_A ARPG836; short chain de 63.4 15 0.00051 37.2 7.7 33 37-69 32-65 (279)
409 2xdo_A TETX2 protein; tetracyc 63.4 8.2 0.00028 41.4 6.0 34 37-70 26-59 (398)
410 1zmt_A Haloalcohol dehalogenas 63.2 5.7 0.0002 39.8 4.4 75 37-118 1-81 (254)
411 2hsi_A Putative peptidase M23; 63.1 5 0.00017 41.6 3.9 64 649-721 190-253 (282)
412 3nks_A Protoporphyrinogen oxid 63.0 14 0.00046 40.5 7.8 76 36-111 1-81 (477)
413 3l77_A Short-chain alcohol deh 62.7 6.5 0.00022 38.7 4.6 33 37-69 2-35 (235)
414 2hun_A 336AA long hypothetical 62.6 30 0.001 35.6 10.1 72 38-118 4-84 (336)
415 2ho3_A Oxidoreductase, GFO/IDH 62.6 6.8 0.00023 41.0 5.0 88 38-138 2-90 (325)
416 3e03_A Short chain dehydrogena 62.6 41 0.0014 33.8 10.9 35 37-71 6-41 (274)
417 2b4q_A Rhamnolipids biosynthes 62.4 14 0.00049 37.5 7.3 33 37-69 29-62 (276)
418 3h28_A Sulfide-quinone reducta 62.4 7.5 0.00026 42.3 5.5 34 36-69 1-36 (430)
419 2raf_A Putative dinucleotide-b 62.4 25 0.00086 34.1 8.9 46 36-85 18-63 (209)
420 1i24_A Sulfolipid biosynthesis 62.4 14 0.00049 39.3 7.7 32 37-68 11-43 (404)
421 3u3x_A Oxidoreductase; structu 62.4 6.7 0.00023 41.9 5.0 89 38-138 27-116 (361)
422 4ggi_A UDP-2,3-diacylglucosami 62.3 3.2 0.00011 43.1 2.3 72 36-116 3-76 (283)
423 3v2h_A D-beta-hydroxybutyrate 62.2 19 0.00064 36.7 8.2 33 36-68 24-57 (281)
424 4dgk_A Phytoene dehydrogenase; 62.2 5.4 0.00019 44.2 4.4 34 37-70 1-34 (501)
425 2ph5_A Homospermidine synthase 62.1 23 0.0008 39.2 9.3 98 33-138 9-111 (480)
426 1lnq_A MTHK channels, potassiu 62.0 3 0.0001 44.0 2.1 111 38-164 116-226 (336)
427 3tfo_A Putative 3-oxoacyl-(acy 61.9 12 0.00042 37.9 6.7 33 37-69 4-37 (264)
428 1f0k_A MURG, UDP-N-acetylgluco 61.9 51 0.0017 34.0 11.8 99 38-138 7-123 (364)
429 3c24_A Putative oxidoreductase 61.7 9.2 0.00031 39.1 5.7 32 36-67 10-42 (286)
430 3pxx_A Carveol dehydrogenase; 61.7 71 0.0024 32.0 12.6 33 37-69 10-43 (287)
431 1vl8_A Gluconate 5-dehydrogena 61.7 17 0.00057 36.7 7.7 33 37-69 21-54 (267)
432 4eye_A Probable oxidoreductase 61.7 6.3 0.00022 41.6 4.6 76 36-118 159-236 (342)
433 4hb9_A Similarities with proba 61.7 9.1 0.00031 40.7 5.9 32 39-70 3-34 (412)
434 1cyd_A Carbonyl reductase; sho 61.5 6.6 0.00023 38.7 4.5 75 37-118 7-85 (244)
435 1y1p_A ARII, aldehyde reductas 61.5 12 0.00043 38.5 6.8 34 36-69 10-44 (342)
436 3tzq_B Short-chain type dehydr 61.4 24 0.00082 35.6 8.8 75 37-118 11-94 (271)
437 2a4k_A 3-oxoacyl-[acyl carrier 61.2 13 0.00044 37.5 6.7 33 37-69 6-39 (263)
438 3ip1_A Alcohol dehydrogenase, 61.2 6.1 0.00021 42.8 4.5 77 36-118 213-291 (404)
439 3tl3_A Short-chain type dehydr 61.2 12 0.0004 37.5 6.3 32 37-68 9-41 (257)
440 3ics_A Coenzyme A-disulfide re 61.1 7.3 0.00025 44.4 5.3 38 34-71 33-72 (588)
441 3moi_A Probable dehydrogenase; 61.1 13 0.00045 39.9 7.1 144 37-194 2-150 (387)
442 1kew_A RMLB;, DTDP-D-glucose 4 61.1 30 0.001 36.1 9.8 73 39-118 2-82 (361)
443 2pd4_A Enoyl-[acyl-carrier-pro 61.0 15 0.00052 37.1 7.2 34 37-70 6-42 (275)
444 3ko8_A NAD-dependent epimerase 60.9 5.7 0.0002 40.8 4.0 33 38-70 1-34 (312)
445 3sju_A Keto reductase; short-c 60.9 16 0.00053 37.2 7.3 33 37-69 24-57 (279)
446 2cf5_A Atccad5, CAD, cinnamyl 60.9 6.7 0.00023 41.7 4.6 71 37-118 181-253 (357)
447 2yq5_A D-isomer specific 2-hyd 60.8 25 0.00085 37.4 9.0 34 37-70 148-181 (343)
448 1zh8_A Oxidoreductase; TM0312, 60.8 10 0.00035 40.0 6.0 91 36-138 17-110 (340)
449 3nzo_A UDP-N-acetylglucosamine 60.8 24 0.00083 37.9 9.2 75 37-116 35-119 (399)
450 1dxy_A D-2-hydroxyisocaproate 60.7 15 0.00051 38.8 7.3 34 37-70 145-178 (333)
451 1pfk_A Phosphofructokinase; tr 60.6 17 0.00057 38.3 7.5 104 36-141 1-124 (320)
452 3m6i_A L-arabinitol 4-dehydrog 60.6 8.2 0.00028 41.0 5.3 77 37-118 180-261 (363)
453 1yqd_A Sinapyl alcohol dehydro 60.5 8.3 0.00028 41.2 5.3 72 37-119 188-261 (366)
454 1r0k_A 1-deoxy-D-xylulose 5-ph 60.5 34 0.0012 36.9 10.1 126 37-167 4-148 (388)
455 4e12_A Diketoreductase; oxidor 60.5 9.9 0.00034 39.0 5.7 31 37-67 4-34 (283)
456 3h8l_A NADH oxidase; membrane 60.5 7.6 0.00026 41.8 5.1 33 37-69 1-36 (409)
457 3lzw_A Ferredoxin--NADP reduct 60.4 5.6 0.00019 41.0 3.8 33 37-69 7-39 (332)
458 3uxy_A Short-chain dehydrogena 60.3 30 0.001 34.8 9.3 70 37-118 28-103 (266)
459 3ai3_A NADPH-sorbose reductase 60.3 14 0.00047 37.1 6.7 33 37-69 7-40 (263)
460 3qiv_A Short-chain dehydrogena 60.2 16 0.00054 36.3 7.1 33 37-69 9-42 (253)
461 4b4o_A Epimerase family protei 60.1 11 0.00038 38.4 6.1 32 39-70 2-34 (298)
462 3evt_A Phosphoglycerate dehydr 60.0 50 0.0017 34.6 11.1 34 37-70 137-170 (324)
463 4huj_A Uncharacterized protein 60.0 6.7 0.00023 38.7 4.1 32 36-67 22-53 (220)
464 3i1j_A Oxidoreductase, short c 59.9 23 0.0008 34.8 8.3 33 37-69 14-47 (247)
465 3dty_A Oxidoreductase, GFO/IDH 59.6 16 0.00055 39.4 7.5 96 38-139 13-114 (398)
466 1lc0_A Biliverdin reductase A; 59.6 27 0.00093 35.9 9.0 82 38-138 8-93 (294)
467 3bio_A Oxidoreductase, GFO/IDH 59.6 7.4 0.00025 40.6 4.6 83 38-138 10-93 (304)
468 2zcu_A Uncharacterized oxidore 59.5 11 0.00038 37.9 5.9 70 39-117 1-73 (286)
469 3f9i_A 3-oxoacyl-[acyl-carrier 59.5 7.7 0.00026 38.5 4.5 78 36-118 13-93 (249)
470 2yv2_A Succinyl-COA synthetase 59.5 52 0.0018 34.0 11.1 104 38-164 14-124 (297)
471 1hdc_A 3-alpha, 20 beta-hydrox 59.2 18 0.00063 36.0 7.4 33 37-69 5-38 (254)
472 1xdw_A NAD+-dependent (R)-2-hy 59.2 21 0.00073 37.6 8.1 33 37-69 146-178 (331)
473 3h7a_A Short chain dehydrogena 59.2 21 0.0007 35.7 7.7 34 37-70 7-41 (252)
474 1spx_A Short-chain reductase f 59.2 14 0.00048 37.3 6.6 33 37-69 6-39 (278)
475 3rkr_A Short chain oxidoreduct 59.1 13 0.00046 37.2 6.3 33 37-69 29-62 (262)
476 4dyv_A Short-chain dehydrogena 59.0 14 0.00048 37.5 6.5 75 37-118 28-111 (272)
477 3l6d_A Putative oxidoreductase 59.0 9.3 0.00032 39.7 5.2 32 36-67 8-39 (306)
478 1h2b_A Alcohol dehydrogenase; 58.9 4.7 0.00016 42.9 3.0 75 37-118 187-263 (359)
479 3sc4_A Short chain dehydrogena 58.8 43 0.0015 33.9 10.3 35 37-71 9-44 (285)
480 3svt_A Short-chain type dehydr 58.7 16 0.00056 37.0 7.0 33 37-69 11-44 (281)
481 3two_A Mannitol dehydrogenase; 58.7 20 0.00069 37.7 7.9 37 36-72 176-212 (348)
482 3s55_A Putative short-chain de 58.7 71 0.0024 32.0 11.9 33 37-69 10-43 (281)
483 2gk4_A Conserved hypothetical 58.7 38 0.0013 33.8 9.4 69 38-116 4-91 (232)
484 2pnf_A 3-oxoacyl-[acyl-carrier 58.6 14 0.00047 36.4 6.3 33 37-69 7-40 (248)
485 3ab1_A Ferredoxin--NADP reduct 58.6 9.4 0.00032 40.1 5.3 33 37-69 14-46 (360)
486 4dry_A 3-oxoacyl-[acyl-carrier 58.5 12 0.00041 38.2 6.0 33 37-69 33-66 (281)
487 4fc7_A Peroxisomal 2,4-dienoyl 58.5 25 0.00085 35.6 8.3 33 37-69 27-60 (277)
488 3ggo_A Prephenate dehydrogenas 58.4 12 0.0004 39.2 5.9 33 35-67 31-65 (314)
489 4e4y_A Short chain dehydrogena 58.3 32 0.0011 33.8 9.0 71 37-118 4-79 (244)
490 1wwk_A Phosphoglycerate dehydr 58.3 25 0.00085 36.6 8.4 33 37-69 142-174 (307)
491 1e3i_A Alcohol dehydrogenase, 58.3 12 0.0004 40.0 6.0 76 37-118 196-274 (376)
492 2gag_B Heterotetrameric sarcos 58.2 11 0.00038 40.1 5.9 33 37-69 21-55 (405)
493 3euw_A MYO-inositol dehydrogen 58.2 15 0.00051 38.6 6.8 89 37-138 4-93 (344)
494 3oh8_A Nucleoside-diphosphate 58.2 34 0.0012 38.2 10.1 35 37-71 147-182 (516)
495 2wyu_A Enoyl-[acyl carrier pro 58.1 11 0.00036 38.0 5.3 33 37-69 8-43 (261)
496 3uko_A Alcohol dehydrogenase c 58.0 9.4 0.00032 40.8 5.2 76 37-118 194-272 (378)
497 4e3z_A Putative oxidoreductase 58.0 19 0.00065 36.2 7.3 32 37-68 26-58 (272)
498 2ew2_A 2-dehydropantoate 2-red 57.8 10 0.00035 38.9 5.3 32 36-67 2-33 (316)
499 1zk4_A R-specific alcohol dehy 57.8 17 0.00058 35.8 6.8 33 37-69 6-39 (251)
500 4gsl_A Ubiquitin-like modifier 57.5 13 0.00045 42.6 6.4 31 37-67 326-356 (615)
No 1
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=100.00 E-value=1.8e-109 Score=979.20 Aligned_cols=645 Identities=40% Similarity=0.625 Sum_probs=501.4
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
|||||||+|+|++|++++++|+++|+++++++++++..+++.++||+++.+++.+..++|+|.+.|++++++.++|+|||
T Consensus 1 m~~kiLIanrGeia~riiraar~lGi~~vav~sd~d~~a~~~~~aD~~~~i~p~~~~~syld~~~i~~~a~~~~~daI~p 80 (681)
T 3n6r_A 1 MFNKILIANRGEIACRVIKTARKMGISTVAIYSDADKQALHVQMADEAVHIGPPPANQSYIVIDKVMAAIRATGAQAVHP 80 (681)
T ss_dssp -CCCBCBSCCHHHHHHHHHHHGGGSCCBCCEECSTTSSCHHHHHSSCCEECSSSSGGGTTSCHHHHHHHHHHTCCSCCBC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEEcCCCCCChhHHhCCEEEEcCCCCcccCccCHHHHHHHHHHhCcCEEEE
Confidence 78999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeec
Q 041518 116 GYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPT 195 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~ 195 (765)
+|||++|++.+++.|++.|++|+||++++++.++||..+|++|+++|||+||++.....+.+++.++++++|||+||||.
T Consensus 81 g~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~dK~~~k~~l~~~GVPvpp~~~~~~~s~~e~~~~a~~igyPvVvKp~ 160 (681)
T 3n6r_A 81 GYGFLSENSKFAEALEAEGVIFVGPPKGAIEAMGDKITSKKIAQEANVSTVPGYMGLIEDADEAVKISNQIGYPVMIKAS 160 (681)
T ss_dssp CSSSSTTCHHHHHHHHTTTCCCSSSCHHHHHHTTSHHHHHHHHHTTTCCCCCC---------------------------
T ss_pred CCCccccCHHHHHHHHHcCCceECCCHHHHHHhCCHHHHHHHHHHcCcCcCCccccCcCCHHHHHHHHHhcCCcEEEEEC
Confidence 99999999999999999999999999999999999999999999999999998754456889999999999999999999
Q ss_pred CCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeeee
Q 041518 196 HGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKIIE 275 (765)
Q Consensus 196 ~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~e 275 (765)
.|+||+||+++++.+|+.++++.+.+++.+.|+++.+|||+||+|++|+++++++|++|+++++++|+|+++++|++.++
T Consensus 161 ~ggggkGv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEe~I~g~rei~V~v~~d~~G~vv~l~~rd~s~qr~~~k~~e 240 (681)
T 3n6r_A 161 AGGGGKGMRIAWNDQEAREGFQSSKNEAANSFGDDRIFIEKFVTQPRHIEIQVLCDSHGNGIYLGERECSIQRRNQKVVE 240 (681)
T ss_dssp ------------------------------------------CCSCEEEEEEEECCSSSCCEEEEEEECCCEETTEECEE
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCcEEEEEEEEeCCCCEEEEeeeecceeccCccEEE
Confidence 99999999999999999999999999888889889999999999889999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcCC
Q 041518 276 EAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANGE 355 (765)
Q Consensus 276 ~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G~ 355 (765)
.+|++.++++.+++|.+.+.++++++||+|++++||++++ +|++||||||||+|++|+++++++|+|++++++++++|+
T Consensus 241 ~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~d~-dg~~~~lEiNpR~~~~~~~te~~tGvdl~~~~l~~a~G~ 319 (681)
T 3n6r_A 241 EAPSPFLDEATRRAMGEQAVALAKAVGYASAGTVEFIVDG-QKNFYFLEMNTRLQVEHPVTELITGVDLVEQMIRVAAGE 319 (681)
T ss_dssp EESCSSCCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECT-TSCCCCCEEECSCCTTHHHHHHHHTCCHHHHHHHHHTSC
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEeC-CCCEEEEecccccCCCcHHhHHHhCCCHHHHHHHHHCCC
Confidence 9999889999999999999999999999999999999997 788999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCC-------------------CCcEEEEecccCCCee
Q 041518 356 PLPLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVS-------------------SKAVRVETGVEQGDTV 416 (765)
Q Consensus 356 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~-------------------~~~vrv~~~v~~G~~v 416 (765)
++++.+.++...||++++|+|||||.++|.|++|+|..++.|..+ ++ ||+|+++.+|+.|
T Consensus 320 ~l~~~~~~~~~~g~ai~~ri~aedp~~~f~p~~G~i~~~~~p~~~~~~~~~~~~~w~~d~~~~~~~-vr~d~~~~~g~~v 398 (681)
T 3n6r_A 320 PLSITQGDVKLTGWAIENRLYAEDPYRGFLPSIGRLTRYRPPAETAAGPLLVNGKWQGDAPSGEAA-VRNDTGVYEGGEI 398 (681)
T ss_dssp CCSSCTTTCCCCSEEEEEEEESEEGGGTTEECCEECSCEECCCC--------------------CC-EEEEESCCTTCEE
T ss_pred CCCCCccccceeEEEEEEEEecCCcccccCCCCcEEEEEECCCCCcccccccccccccccccCCCc-EEEEccccCCCcc
Confidence 999988889999999999999999999999999999999999733 37 9999999999999
Q ss_pred CCccCCcceEEEEEe---------------e-EEeccccCHHHHHHHhcCcCcccCccccccccccccccccCCCCchhh
Q 041518 417 SMHYDPMIANLWYGA---------------K-TVAGVPTNINFLQKLAKHRAFESGDVETHFIEQHKDELFVKPSQSVSA 480 (765)
Q Consensus 417 ~~~~d~~~~~~i~~g---------------~-~i~g~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~ 480 (765)
+++|||||||||+|| + .|.|++||++||++|++||+|++|+++|+||++++++++.....++.
T Consensus 399 ~~~yd~~iak~i~~g~~r~~a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~~~~~- 477 (681)
T 3n6r_A 399 SMYYDPMIAKLCTWAPTRAAAIEAMRIALDSFEVEGIGHNLPFLSAVMDHPKFISGDMTTAFIAEEYPEGFEGVNLPET- 477 (681)
T ss_dssp CTTSCCEEEEEEEEESSHHHHHHHHHHHHHHCEECSSCCSHHHHHHHHHCHHHHHCCCCSSHHHHHCTTSCCCCCCCHH-
T ss_pred CCCCCCceeEEEEEcCCHHHHHHHHHHHHhcCEEECccCCHHHHHHHhCCHhhccCCcccchhhhccccccCCCCCChh-
Confidence 999999999999999 6 99999999999999999999999999999999999888766544320
Q ss_pred hhhhhhhHHHHHHHHHHHHhhhccccCCCCCCCcccCccccCCCceeccCceeEEEEEECCcccCCCceeEEEEEEEecC
Q 041518 481 EMNSAARLSATLVAACIFEKEKSTLKESPPGNHCLLSIWYTDPPFRVHHHARRIMEFEWENEHDDSGSKLLTLTVTYQAD 560 (765)
Q Consensus 481 ~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~ 560 (765)
....++++|+++..... .+. ..++...+|||.+....+.+.+ ++. .+.++++.. +
T Consensus 478 -----~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~-~ 532 (681)
T 3n6r_A 478 -----DLRRVAAAAAAMHRVAE---IRR-------TRVSGRMDNHERRVGTEWVVTL--QGA-------DFPVTIAAD-H 532 (681)
T ss_dssp -----HHHHHHHHHHHHHHHHH---HHH-------TTCTTCCTTCCCCCCSEEEEEC--SSC-------EEEEEEEEC-S
T ss_pred -----HHHHHHHHHHHHHHHhh---hcc-------cccccCCCccccCCCcCEEEEE--CCE-------EEEEEEEEc-C
Confidence 01122222222222211 010 1122335789987766655554 666 788988874 4
Q ss_pred ccEEEEE-CCCceEEEEEEEEEeCCceEEEEECCEEEEEEEEEeecccceEEEEEeCCeeEEEEEecCCCCCCccccccc
Q 041518 561 GNYLIEM-GEDGSYISEVKATYLGEHKFRVEFDVVSMDVHLAVYNKGRIKHIHAWHGLHHHHFKQKLGLELPDEDETQHK 639 (765)
Q Consensus 561 ~~~~v~~-~~~~~~~v~~~~~~~~~~~l~~~~~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~ 639 (765)
+.|.+.+ ++ ..+.+.. .+..++..+.+++||+++.+++...+ +.++++.+|..+.+...++... .....+
T Consensus 533 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~dG~~~~~~~~~~~----~~~~l~~~g~~~~v~~~~~~~~---~~~~~~ 603 (681)
T 3n6r_A 533 DGSTVSFDDG-SSMRVTS-DWTPGDQLANLMVDGAPLVLKVGKIS----GGFRIRTRGADLKVHVRTPRQA---ELARLM 603 (681)
T ss_dssp SCEEEEETTS-CEEEEEE-CCCTTCSEEEEEETTEEEEEEEEEET----TEEEEECSSCCEEEEEECHHHH---HHHTTS
T ss_pred CeEEEEEeCC-cEEEEEE-EecCCCeEEEEEECCEEEEEEEEEeC----CEEEEEECCeEEEEEecCchhh---hhcccc
Confidence 4599998 55 5555542 01123345889999999999998877 8999999999999987765321 000111
Q ss_pred cccccCCCCCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEE
Q 041518 640 TSFETATGPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQ 718 (765)
Q Consensus 640 ~~~~~~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 718 (765)
......++...|+|||||+|++|+|++||.|++||+|++||+|||+++|+||.+|+|+++++++||+|..|++|++|+
T Consensus 604 -~~~~~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamKm~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~ 681 (681)
T 3n6r_A 604 -PEKLPPDTSKMLLCPMPGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEKKGVVAKINASAGNSLAVDDVIMEFE 681 (681)
T ss_dssp -CCCCCCCCCSEEECCSCEEEEEECCCTTCEECTTCEEEEEECSSCEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred -ccccCCCCCCeEECCCcEEEEEEEeCCCCEEcCCCEEEEEEecCceeEEECCCCeEEEEEEeCCcCEeCCCCEEEEEC
Confidence 122344567889999999999999999999999999999999999999999999999999999999999999999884
No 2
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=100.00 E-value=8.7e-110 Score=980.96 Aligned_cols=633 Identities=44% Similarity=0.722 Sum_probs=485.1
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 34 QQRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 34 ~~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
.+|||||||+|+|++|++++++|+++|+++++++++++..+.+.++||+++.+++....++|+|.+.|++++++.++|+|
T Consensus 25 ~~m~~kILI~g~Geia~~iiraar~lGi~~vav~s~~d~~a~~~~~AD~~~~i~~~~~~~syld~~~i~~~a~~~~~daI 104 (675)
T 3u9t_A 25 YRSIQRLLVANRGEIACRVMRSARALGIGSVAVHSDIDRHARHVAEADIAVDLGGAKPADSYLRGDRIIAAALASGAQAI 104 (675)
T ss_dssp CCCCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHTCSEEEECCCSSGGGTTTCHHHHHHHHHHTTCSEE
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCchhHhhCCEEEEcCCCccccCccCHHHHHHHHHHhCcCEE
Confidence 35799999999999999999999999999999999999999999999999999988888899999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEe
Q 041518 114 HPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIK 193 (765)
Q Consensus 114 ~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVK 193 (765)
||||||++|+..+++.|++.|++|+||++++++.++||..+|++|+++|||+||++.....+.+++.++++++|||+|||
T Consensus 105 ~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GVpvpp~~~~~~~s~~e~~~~a~~igyPvvvK 184 (675)
T 3u9t_A 105 HPGYGFLSENADFARACEEAGLLFLGPPAAAIDAMGSKSAAKALMEEAGVPLVPGYHGEAQDLETFRREAGRIGYPVLLK 184 (675)
T ss_dssp ECCSSTTTTCHHHHHHHHTTTCEESSCCHHHHHHHTSHHHHHHHHHHTTCCBCCCCCSCCCCTTHHHHHHHHSCSSBCCB
T ss_pred EeCCcccccCHHHHHHHHHcCCceeCCCHHHHHHhchHHHHHHHHHHcCcCcCCccccCCCCHHHHHHHHHhCCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999988755668999999999999999999
Q ss_pred ecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceee
Q 041518 194 PTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKI 273 (765)
Q Consensus 194 P~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~ 273 (765)
|..|+||+||++|++.+|+.++++.+.+++...|+++.+|+|+||+|++|+++++++|++|+++++++|+|+++++|++.
T Consensus 185 p~~G~Gg~Gv~iv~~~~el~~a~~~~~~ea~~~fg~~~vlvEeyI~g~reiev~v~~d~~G~vv~l~~rd~s~qr~~qk~ 264 (675)
T 3u9t_A 185 AAAGGGGKGMKVVEREAELAEALSSAQREAKAAFGDARMLVEKYLLKPRHVEIQVFADRHGHCLYLNERDCSIQRRHQKV 264 (675)
T ss_dssp CCC------CCCBCCTTTHHHHHSCCCC--------CCCBCCBCCSSCBCEEEEEEECSSSCEEEEEEEECCCBSSSSBC
T ss_pred ECCCCCCccEEEECCHHHHHHHHHHHHHHHHHhcCCCcEEEEeecCCCcEEEEEEEEcCCCCEEEEeccccceeeccceE
Confidence 99999999999999999999999988888888888899999999998899999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHc
Q 041518 274 IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVAN 353 (765)
Q Consensus 274 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~ 353 (765)
++++|++.++++.+++|.+.+.++++++||+|++++||++++ +|++||||||||+|++|+++|+++|+|++++++++++
T Consensus 265 ie~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~vEf~~~~-dG~~~~iEiNpR~~~~~~~te~~tGvdl~~~~l~~a~ 343 (675)
T 3u9t_A 265 VEEAPAPGLGAELRRAMGEAAVRAAQAIGYVGAGTVEFLLDE-RGQFFFMEMNTRLQVEHPVTEAITGLDLVAWQIRVAR 343 (675)
T ss_dssp EEEESCSSCCHHHHHHHHHHHHHHHHHTTCCSEEEEECCBCT-TSCBCBCEEESSCCTTHHHHHHTTTCCHHHHHHHHHT
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEEEcC-CCCEEEEeccccccCCchhhhhhcCCCHHHHHHHHHC
Confidence 999999889999999999999999999999999999999997 7889999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe--
Q 041518 354 GEPLPLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA-- 431 (765)
Q Consensus 354 G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g-- 431 (765)
|+++++.+.+++.+||++++|+|+|||.++|.|++|+|..++.|..++| ||+++++++|+.|+++||||+||+|+||
T Consensus 344 G~~l~~~~~~~~~~g~ai~~ri~aedp~~~f~P~~G~l~~~~~p~~~~g-vr~d~~~~~G~~v~~~~ds~la~vi~~g~~ 422 (675)
T 3u9t_A 344 GEALPLTQEQVPLNGHAIEVRLYAEDPEGDFLPASGRLMLYREAAAGPG-RRVDSGVREGDEVSPFYDPMLAKLIAWGET 422 (675)
T ss_dssp TCCCSCCTTTCCCCSEEEEEEEESCCTTTTSCCCCCBCSEEECCCCCTT-EEEEESCCTTCBCCTTSCCEEEEEEEEESS
T ss_pred CCCCCCCccccccCcceeEEEEEeccCcccccCCCCEEEEEECCCCCCC-EEEEecccCCCEeCCCCCCceEEEEEEeCC
Confidence 9999988888899999999999999999999999999999999944788 9999999999999999999999999999
Q ss_pred -------------e-EEeccccCHHHHHHHhcCcCcccCccccccccccccccccCCCCchhhhhhhhhhHHHHHHHHHH
Q 041518 432 -------------K-TVAGVPTNINFLQKLAKHRAFESGDVETHFIEQHKDELFVKPSQSVSAEMNSAARLSATLVAACI 497 (765)
Q Consensus 432 -------------~-~i~g~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~ 497 (765)
+ .|.|++||++||++|++||+|++|+++|+||++++++++.+...++ ...+++||+++
T Consensus 423 r~~a~~~~~~al~~~~i~g~~tn~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 494 (675)
T 3u9t_A 423 REEARQRLLAMLAETSVGGLRTNLAFLRRILGHPAFAAAELDTGFIARHQDDLLPAPQALP--------EHFWQAAAEAW 494 (675)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCTHHHHHHHHTCHHHHTTCCCTTHHHHTHHHHSCCCCCCC--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcEEEECccCCHHHHHHHhCCHHHhCCCcccchhhhcchhhcCCCCCCh--------HHHHHHHHHHH
Confidence 6 9999999999999999999999999999999999999877644332 23344443333
Q ss_pred HHhhhccccCCCCCCCcccCccccCCCceeccCceeEEEEEECCcccCCCceeEEEEEEEecCccEEEEECCCceEEEEE
Q 041518 498 FEKEKSTLKESPPGNHCLLSIWYTDPPFRVHHHARRIMEFEWENEHDDSGSKLLTLTVTYQADGNYLIEMGEDGSYISEV 577 (765)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~v~~~~~~~~~v~~ 577 (765)
....... .. ..+..+||...+|||++....+.+.|.+++. .+.+.++..++ +. +
T Consensus 495 ~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~--~~----------~-- 548 (675)
T 3u9t_A 495 LQSEPGH-RR----DDDPHSPWSRNDGWRSALARESDLMLRCRDE-------RRCVRLRHASP--SQ----------Y-- 548 (675)
T ss_dssp HHHCCCC-CB----TTBTTCGGGCCSCCCSSSCEEEECCEEETTE-------EECCEEEESSS--CS----------E--
T ss_pred HHHhhhh-hc----cccccCcccccccccccCCccEEEEEEECCE-------EEEEEEEEcCC--eE----------E--
Confidence 3221100 00 0011468988899999988888888888887 77788776532 21 1
Q ss_pred EEEEeCCceEEEEECCEEEEEEEEEeecccceEEEEEeCCeeEEEEEecCCCCCCccccccccccccCCCCCCcccCCCc
Q 041518 578 KATYLGEHKFRVEFDVVSMDVHLAVYNKGRIKHIHAWHGLHHHHFKQKLGLELPDEDETQHKTSFETATGPPGSVLSPMA 657 (765)
Q Consensus 578 ~~~~~~~~~l~~~~~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ap~~ 657 (765)
...++.+.+++||+++.+++...+ +.++|+.+|..+.++..++... .....+....|+||||
T Consensus 549 ---~~~~~~~~~~~~G~~~~~~~~~~~----~~~~l~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~v~ap~~ 610 (675)
T 3u9t_A 549 ---RLDGDDLVSRVDGVTRRSAALRRG----RQLFLEWEGELLAIEAVDPIAE-----------AEAAHAHQGGLSAPMN 610 (675)
T ss_dssp ---EEETTEEEEEETTEEEEEEEEEET----TEEEEECSSSEEEEEECCHHHH-----------HC--------------
T ss_pred ---EecCCeEEEEECCEEEEEEEEEeC----CEEEEEECCeEEEEEEcCcccc-----------cccccCCCCeEECCCC
Confidence 234567889999999999998887 8999999999999987655321 1233445678999999
Q ss_pred ceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeC
Q 041518 658 GLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAV 720 (765)
Q Consensus 658 G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~ 720 (765)
|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|+++++++||+|..|++|++|+++
T Consensus 611 G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~~~ 673 (675)
T 3u9t_A 611 GSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDEN 673 (675)
T ss_dssp ---------------------------------------------------------------
T ss_pred EEEEEEEeCCCCEEcCCCEEEEEEecceeEEEECCCCeEEEEEEeCCcCCcCCCCEEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999865
No 3
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=100.00 E-value=7.1e-84 Score=744.68 Aligned_cols=438 Identities=36% Similarity=0.554 Sum_probs=381.6
Q ss_pred CCcCCCCEEEEEcCcHHHHHHHHHHHHC---------CCeEEEEecCCC--CCCcccccccEEEEcCCCCcCcCCCCHHH
Q 041518 32 DKQQRIEKILIANRGEIAYRIMRTAKRL---------GIRTVAVYSDAD--RDSLHVKSADEAIRIGPPPARLSYLNGSS 100 (765)
Q Consensus 32 ~~~~~~kkILI~g~G~~a~~iiraar~~---------Gi~vvav~s~~d--~~~~~~~~aD~~~~i~~~~~~~syld~~~ 100 (765)
+..+|||||||+|||++|++++++||++ |+++|++|++.| +++++.++||+++.+++.+..++|+|.++
T Consensus 51 ~g~~~~~kvLIanrGeiA~riira~r~lG~e~f~~e~Gi~tVav~s~~D~~~~a~~~~~ADe~v~i~~~~~~~syld~~~ 130 (587)
T 3jrx_A 51 GGDRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVEL 130 (587)
T ss_dssp TCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHH
T ss_pred CCCcccCEEEEECChHHHHHHHHHHHHhhhccccccCCceEEEEecccccCcCChhhHhCCEEEEeCCCCccccccCHHH
Confidence 3456899999999999999999999987 899999998655 88999999999999999888899999999
Q ss_pred HHHHHHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccc----------
Q 041518 101 IVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYH---------- 170 (765)
Q Consensus 101 Il~~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~---------- 170 (765)
|+++|++.++|+|||||||++|++.++++|++.|++|+||+++++++++||..+|++|+++|||+||+..
T Consensus 131 Il~~a~~~~vdaV~pG~GflsEn~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~ak~ll~~aGVPvpp~~~~~l~~~~~~~ 210 (587)
T 3jrx_A 131 IVDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTED 210 (587)
T ss_dssp HHHHHHHTTCSEEECCSSTTTTCTHHHHHHHTTTCEESSCCHHHHHHHCSHHHHHHHHHHTTCCBCCBTTTTCCCCC---
T ss_pred HHHHHHHhCCCEEEeCCCccccCHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCeeccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -----------------cCCCCHHHHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEE
Q 041518 171 -----------------GNEQDIDLMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTIL 233 (765)
Q Consensus 171 -----------------~~~~s~~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vl 233 (765)
....+.+++.++++++|||+||||..|+||+||++|++.+|+.++++.+.+++. ++.+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~v~s~eea~~~a~~iGyPvVVKp~~GgGGkGv~iV~s~eEL~~a~~~a~~~~~----~~~vl 286 (587)
T 3jrx_A 211 DLQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIP----GSPIF 286 (587)
T ss_dssp ---CCCCCCCCHHHHHTTSCCSHHHHHHHHHHHCSSEEEEETTCCSSSSEEEECSTTTHHHHHHHHHHHST----TCCEE
T ss_pred ccccccccccchhhccccccCCHHHHHHHHHhcCCeEEEEeCCCCCCCCeEEeCCHHHHHHHHHHHHhhcc----CCCEE
Confidence 114688999999999999999999999999999999999999999998876533 57999
Q ss_pred EecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEE
Q 041518 234 LEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIV 313 (765)
Q Consensus 234 VEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~ 313 (765)
||+||+|++|++|++++|++|+++++++|+|+++++++|.++++|++.++++.+++|.+.+.++++++||+|++++||++
T Consensus 287 VEeyI~g~rei~V~vl~D~~G~vv~l~~rd~siqrr~qk~ie~aPa~~l~~~~~~~i~~~A~~~a~alGy~G~~~VEfl~ 366 (587)
T 3jrx_A 287 LMKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYLY 366 (587)
T ss_dssp EEECCCSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred EEEecCCCcEEEEEEEEcCCCCEEEEeeeeccccccccceeEecCCCCCCHHHHHHHHHHHHHHHHHcCCcceeEEEEEE
Confidence 99999988999999999999999999999999999999999999998789999999999999999999999999999999
Q ss_pred ECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcCCCCC--------------------CCCCC--cccceEEE
Q 041518 314 DTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANGEPLP--------------------LSQSE--VPLLGHAF 371 (765)
Q Consensus 314 ~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G~~l~--------------------~~~~~--~~~~g~ai 371 (765)
++ +|++||||||||+|++|+++++++|+|++++++++++|++++ +.|.+ +.++||||
T Consensus 367 d~-dG~~yflEINpRl~~e~~vte~~tGvdlv~~~lria~G~pL~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~ghai 445 (587)
T 3jrx_A 367 SQ-DGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVI 445 (587)
T ss_dssp CS-SSCEEEEEEESSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCSSSCSSCCCCCSEEE
T ss_pred eC-CCCEEEEEEeCCCCCccceeccccCCCHHHHHHHHHCCCCcccchhcccccccccccccccccccccccCCCCceEE
Confidence 97 788999999999999999999999999999999999999986 22222 56899999
Q ss_pred EEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe---------------e-EEe
Q 041518 372 EARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA---------------K-TVA 435 (765)
Q Consensus 372 ~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g---------------~-~i~ 435 (765)
+||||||||.++|+|++|+|+.+.+|. +++ ||.+.++..+..|++||||||||||+|| + .|.
T Consensus 446 e~Ri~aedp~~~f~p~~G~i~~~~~~~-~~~-v~~~~~~~~~~~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~ 523 (587)
T 3jrx_A 446 AARITSENPDEGFKPSSGTVQELNFRS-SKN-VWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIR 523 (587)
T ss_dssp EEEEEC----------CCCCEEEECSS-CTT-EEEEECCC----------CCEEEEEEEESSHHHHHHHHHHHHHHHHHS
T ss_pred EEeecccCccccCCCCCcEEEEEEeCC-CCc-eEEeccccccCCcCcccCcccceEEEEcCCHHHHHHHHHHHHhccEEe
Confidence 999999999999999999999999998 788 9987777666679999999999999999 6 999
Q ss_pred c-cccCHHHHHHHhcCcCcccCccccccccccccccccCCCC
Q 041518 436 G-VPTNINFLQKLAKHRAFESGDVETHFIEQHKDELFVKPSQ 476 (765)
Q Consensus 436 g-~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 476 (765)
| ++||++||++||+||+|++|+++|+||++++++++.+..+
T Consensus 524 g~~~tn~~~~~~~~~~~~f~~g~~~t~~~~~~~~~~~~~~~~ 565 (587)
T 3jrx_A 524 GDFRTTVEYLINLLETESFQNNDIDTGWLDYLIAEKVQAEKP 565 (587)
T ss_dssp STTSSTTHHHHHHHTSHHHHTTCSCCGGGGC-----------
T ss_pred CCCCCcHHHHHHHhCChhhccCCcchhHHhHhhhhhcccCCC
Confidence 9 8999999999999999999999999999999888765443
No 4
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=2.1e-82 Score=781.67 Aligned_cols=435 Identities=44% Similarity=0.736 Sum_probs=398.4
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCC-CcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 35 QRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPP-PARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 35 ~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~-~~~~syld~~~Il~~a~~~~~DaV 113 (765)
+|||||||+|+|+++++++++|+++|+++++++++++..+.+.++||+.+.+++. ...++|+|.+.|+++++++++|+|
T Consensus 2 ~~~kkVLIagrGeia~riiraa~elGi~vVav~s~~d~~s~~~~~ADe~~~ig~~~~~~~syld~~~Ii~~a~~~~~DaI 81 (1150)
T 3hbl_A 2 KQIKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHRYKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAI 81 (1150)
T ss_dssp -CCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCGGGGTSSEEEECCTTSCTTGGGTCHHHHHHHHHHTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCcccchhhhhcceeeecCCCCCccccccCHHHHHHHHHHhCCCEE
Confidence 4689999999999999999999999999999999999999999999999999765 345789999999999999999999
Q ss_pred EeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEe
Q 041518 114 HPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIK 193 (765)
Q Consensus 114 ~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVK 193 (765)
||+|||++|+..++++|++.|++|+||+++++++++||..+|++|+++|||+||++.....+.+++.++++++|||+|||
T Consensus 82 ~pg~gflsE~~~~a~~le~~Gi~~iGp~~eai~~~~DK~~~r~ll~~aGIPvpp~~~~~v~s~eea~~~a~~iGyPvVVK 161 (1150)
T 3hbl_A 82 HPGYGFLSENEQFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMIK 161 (1150)
T ss_dssp ECTTTTSTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSCBCSSSTTTTTGGGTCSSEEEE
T ss_pred EECCCcccccHHHHHHHHHCCCCeeCCCHHHHHHhCCHHHHHHHHHHcCcCCCCccccCCCCHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999998444558888888899999999999
Q ss_pred ecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceee
Q 041518 194 PTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKI 273 (765)
Q Consensus 194 P~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~ 273 (765)
|..|+||+||++|++.+|+.++++.+.+++...|+++.+|+|+||+|++|+++++++|++|+++++++|+|+.+++|++.
T Consensus 162 P~~GgGg~Gv~vv~s~eeL~~a~~~a~~~a~~~fg~~~vlVEeyI~G~reieV~vl~d~~G~vv~l~er~~s~qr~~~k~ 241 (1150)
T 3hbl_A 162 ATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKV 241 (1150)
T ss_dssp CCC-------CEECCSSSCTHHHHSSSSSCC------CBEEECCCSSCEEEEEEEEECSSSCEEEEEEEEEEEESSSCEE
T ss_pred eCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEccCCCcEEEEEEEEeCCCCEEEEEeeccceeccCcee
Confidence 99999999999999999999999988776666787889999999998899999999999999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHc
Q 041518 274 IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVAN 353 (765)
Q Consensus 274 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~ 353 (765)
++.+|++.++++.+++|.+.+.++++++||+|++++||++++ + ++||||||||+|++|++++.++|+|++++++++++
T Consensus 242 ~e~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~vEflvd~-d-~~y~iEINpR~~g~~~vte~~tGvDlv~~~i~ia~ 319 (1150)
T 3hbl_A 242 VEVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGTVEFLVSG-D-EFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAA 319 (1150)
T ss_dssp EEESSCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEET-T-EEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHT
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEC-C-eEEEEEEeCCCCCCcceeehhcCCCHHHHHHHHHC
Confidence 999999889999999999999999999999999999999996 4 89999999999999999999999999999999999
Q ss_pred CCCCCC------CCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEec-ccCCCeeCCccCCcceE
Q 041518 354 GEPLPL------SQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETG-VEQGDTVSMHYDPMIAN 426 (765)
Q Consensus 354 G~~l~~------~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~-v~~G~~v~~~~d~~~~~ 426 (765)
|++++. .|.++..+||++++|+|+|||.++|.|++|+|+.++.|. ++| ||+|++ +.+|++|+++||||+||
T Consensus 320 G~~L~~~~~~~~~q~~i~~~G~ai~~Ri~aedp~~~f~P~~G~i~~~~~p~-~~g-vr~d~~~~~~G~~v~~~yds~lak 397 (1150)
T 3hbl_A 320 GADLFGEEINMPQQKDITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSG-GFG-VRLDAGDGFQGAEISPYYDSLLVK 397 (1150)
T ss_dssp TCCTTSTTTCCCCGGGCCCCSEEEEEEECSEEGGGTSEECCCCCCEEECCC-CTT-EEEEESSCSSSCCCCTTSCCCSEE
T ss_pred CCCCCccccccccccccccceEEEEEEEeccCCccccCCCCceEEEEEcCC-CCc-eeccccccccCCEeCCcCCCceeE
Confidence 999885 466788899999999999999999999999999999998 789 999997 78999999999999999
Q ss_pred EEEEe---------------e-EEeccccCHHHHHHHhcCcCcccCccccccccccccccccCC
Q 041518 427 LWYGA---------------K-TVAGVPTNINFLQKLAKHRAFESGDVETHFIEQHKDELFVKP 474 (765)
Q Consensus 427 ~i~~g---------------~-~i~g~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~ 474 (765)
+|+|| + .|+|++||++||++++.||+|++|+++|+||++| ++||.-.
T Consensus 398 vi~~g~~~~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~-~~~~~~~ 460 (1150)
T 3hbl_A 398 LSTHAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTTKFIEET-PELFDIQ 460 (1150)
T ss_dssp EEEEESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHHCHHHHHSCCCTTHHHHC-GGGGCCC
T ss_pred EEEEeCCHHHHHHHHHHHHhceEEeCccCCHHHHHHHhCCHHHcCCCcccchhhCC-HhhccCC
Confidence 99999 6 9999999999999999999999999999999987 5665543
No 5
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=100.00 E-value=4.3e-82 Score=727.70 Aligned_cols=427 Identities=36% Similarity=0.570 Sum_probs=356.1
Q ss_pred CcCCCCEEEEEcCcHHHHHHHHHHHHC---------CCeEEEEecCCC--CCCcccccccEEEEcCCCCcCcCCCCHHHH
Q 041518 33 KQQRIEKILIANRGEIAYRIMRTAKRL---------GIRTVAVYSDAD--RDSLHVKSADEAIRIGPPPARLSYLNGSSI 101 (765)
Q Consensus 33 ~~~~~kkILI~g~G~~a~~iiraar~~---------Gi~vvav~s~~d--~~~~~~~~aD~~~~i~~~~~~~syld~~~I 101 (765)
..+|||||||+|||++|++++++||++ |+++|++|++.| +++++.++||+++.+++.+..++|+|.++|
T Consensus 36 ~~~~~~kvLianrGeia~riira~r~lg~e~~~~e~gi~~Vav~s~~D~~~~a~~~~~ADe~~~i~~~~~~~sy~d~~~i 115 (540)
T 3glk_A 36 GDRVIEKVLIANNGIAAVKCMRSIRRWAYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELI 115 (540)
T ss_dssp CSCCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHH
T ss_pred CcccccEEEEECChHHHHHHHHHHHHhccccccccCCcEEEEEEcCcccCcCChhHHhCCEEEEeCCCCcccccccHHHH
Confidence 356899999999999999999999986 899999998655 889999999999999988888999999999
Q ss_pred HHHHHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccc-----------
Q 041518 102 VDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYH----------- 170 (765)
Q Consensus 102 l~~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~----------- 170 (765)
+++|++.++|+|||||||++|++.++++|++.|++|+||+++++++++||..+|++|+++|||+||+..
T Consensus 116 i~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~ll~~~GVPvp~~~~~~l~~~~~~~~ 195 (540)
T 3glk_A 116 VDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMWALGDKIASTVVAQTLQVPTLPWSGSGLTVEWTEDD 195 (540)
T ss_dssp HHHHHHTTCSEEECCSSGGGGCTHHHHHHHHTTCEESSCCHHHHC---CHHHHHHHHHHTTCCBCCBTTTTCCCCCCCTT
T ss_pred HHHHHHhCCCEEEeCCCccccCHHHHHHHHHcCCceeCCCHHHHHHhCCHHHHHHHHHHcCCCCCCcccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred ----------------cCCCCHHHHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEE
Q 041518 171 ----------------GNEQDIDLMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILL 234 (765)
Q Consensus 171 ----------------~~~~s~~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlV 234 (765)
....+.+++.++++++|||+||||..|+||+||++|++.+||.++++.+..++. ++.+||
T Consensus 196 ~~~~~~~~~~~~~~~~~~v~s~~ea~~~a~~igyPvVVKp~~ggGG~Gv~iv~~~~eL~~a~~~~~~~~~----~~~vlV 271 (540)
T 3glk_A 196 LQQGKRISVPEDVYDKGCVKDVDEGLEAAERIGFPLMIKASEGGGGKGIRKAESAEDFPILFRQVQSEIP----GSPIFL 271 (540)
T ss_dssp C----CCCCCHHHHHHTSCCSHHHHHHHHHHHCSSEEEEETTCC----EEEECSTTTHHHHHHHHHHHST----TCCEEE
T ss_pred cccccccccccccccccCcCCHHHHHHHHHhcCCcEEEEECCCCCCCCEEEECCHHHHHHHHHHHHhhcc----CCCEEE
Confidence 114588999999999999999999999999999999999999999998876532 578999
Q ss_pred ecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEE
Q 041518 235 EKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVD 314 (765)
Q Consensus 235 EeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~ 314 (765)
|+||+|++|++|++++|++|+++++++++|+++++++|.++.+|++.++++.+++|.+.+.++++++||+|++++||+++
T Consensus 272 Ee~I~g~rei~V~vl~d~~G~vv~l~~rd~s~qr~~~k~ie~~Pa~~l~~~~~~~l~~~a~~~~~alG~~G~~~VEf~~d 351 (540)
T 3glk_A 272 MKLAQHARHLEVQILADQYGNAVSLFGRDCSIQRRHQKIVEEAPATIAPLAIFEFMEQCAIRLAKTVGYVSAGTVEYLYS 351 (540)
T ss_dssp EECCSSEEEEEEEEEECTTSCEEEEEEEEEEEC---CCSEEEESCTTSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE
T ss_pred EEecCCCcEEEEEEEEcCCCCEEEEeceeeeeeecccceEEecCCCCCCHHHHHHHHHHHHHHHHHcCCccceEEEEEEc
Confidence 99999779999999999999999999999999999999999999987899999999999999999999999999999999
Q ss_pred CCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcCCCCC--------------------CCCC--CcccceEEEE
Q 041518 315 TVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANGEPLP--------------------LSQS--EVPLLGHAFE 372 (765)
Q Consensus 315 ~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G~~l~--------------------~~~~--~~~~~g~ai~ 372 (765)
+ +|++||||||||+|++|+++++++|+|++++++++++|++++ +.+. ++.++||||+
T Consensus 352 ~-dg~~~~lEiNpR~~~~~~vte~~tGvdl~~~~lr~a~G~pL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~aie 430 (540)
T 3glk_A 352 Q-DGSFHFLELNPRLQVEHPCTEMIADVNLPAAQLQIAMGVPLHRLKDIRLLYGESPWGVTPISFETPSNPPLARGHVIA 430 (540)
T ss_dssp T-TSCEEEEEEECSCCTTHHHHHHHHTCCHHHHHHHHHTTCCGGGCHHHHHHTTCCSSCCSCCCSCCC----CCCSEEEE
T ss_pred C-CCCEEEEEEECCCCCcchhhHhHhCCCHHHHHHHHHCCCCcccccccccccccccccccccccccccccCCCceeEEE
Confidence 7 788999999999999999999999999999999999999986 2222 2567999999
Q ss_pred EEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe---------------e-EEec
Q 041518 373 ARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA---------------K-TVAG 436 (765)
Q Consensus 373 ~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g---------------~-~i~g 436 (765)
+|||||||.++|.|++|+|+.+++|. +++ ||.+.++..+..|++||||||||||+|| + .|.|
T Consensus 431 ~ri~aedp~~~f~p~~G~i~~~~~~~-~~~-v~~~~~~~~~~~~~~~yd~~~~k~i~~g~~r~~a~~~~~~al~~~~i~g 508 (540)
T 3glk_A 431 ARITSENPDEGFKPSSGTVQELNFRS-SKN-VWGYFSVAATGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRG 508 (540)
T ss_dssp EEEC------------CCEEECCCSS-CCS-EEEEEEC------------CEEEEEEEESSHHHHHHHHHHHHHHHTCC-
T ss_pred EEEeccCCcccccCCceEEEEEEcCC-CCc-EEEEeccccCCCCCCccCcccceEEEEcCCHHHHHHHHHHHHhccEEec
Confidence 99999999999999999999999998 788 9987777666679999999999999999 6 9999
Q ss_pred -cccCHHHHHHHhcCcCcccCcccccccccc
Q 041518 437 -VPTNINFLQKLAKHRAFESGDVETHFIEQH 466 (765)
Q Consensus 437 -~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~ 466 (765)
++||++||++||+||+|++|+++|+||+++
T Consensus 509 ~~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~ 539 (540)
T 3glk_A 509 DFRTTVEYLINLLETESFQNNDIDTGWLDYL 539 (540)
T ss_dssp ---HHHHHHHHHHHSHHHHHTCC--------
T ss_pred ccCCcHHHHHHHhCChhhcCCCccchhhhhc
Confidence 899999999999999999999999999975
No 6
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=100.00 E-value=4.3e-78 Score=683.81 Aligned_cols=429 Identities=45% Similarity=0.763 Sum_probs=410.7
Q ss_pred CcCCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 33 KQQRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 33 ~~~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
+.||||||||+|+|+++++++++|+++|+++++++++++..+++.++||+.+.+++.+..++|+|.+.|++++++.++|+
T Consensus 2 n~m~~~kiLI~g~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~ 81 (446)
T 3ouz_A 2 NAMEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAEADA 81 (446)
T ss_dssp CTTCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSE
T ss_pred CccccceEEEECCCHHHHHHHHHHHHcCCEEEEEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCE
Confidence 46789999999999999999999999999999999999999999999999999988888889999999999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEE
Q 041518 113 IHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILI 192 (765)
Q Consensus 113 V~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVV 192 (765)
|+|++|+++|+..+++.+++.|++++||++++++.++||..+|++|+++|||+||++.....+.+++.++++++|||+||
T Consensus 82 i~p~~g~~~e~~~~~~~~~~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~~~~~~e~~~~~~~~g~Pvvv 161 (446)
T 3ouz_A 82 IFPGYGFLSENQNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVIL 161 (446)
T ss_dssp EECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSSCCSHHHHHHHHHHHCSSEEE
T ss_pred EEECCcccccCHHHHHHHHHCCCceECcCHHHHHHhCCHHHHHHHHHHcCCCcCCCcccCCCCHHHHHHHHHHhCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999998733345999999999999999999
Q ss_pred eecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeecccccccee
Q 041518 193 KPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQK 272 (765)
Q Consensus 193 KP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k 272 (765)
||..|+||+||+++++.+|+.++++.+..++...|+++.+++|+||+|++|+++++++|++|+++++++++|+.++++++
T Consensus 162 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~d~~g~~~~~~~~~~~~~~~~~~ 241 (446)
T 3ouz_A 162 KAAAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDSFGNVIHVGERDCSMQRRHQK 241 (446)
T ss_dssp EETTCCTTCSEEEECSGGGHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEE
T ss_pred EECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCCcEEEEEEEEcCCCCEEEEeeceeeeeecCce
Confidence 99999999999999999999999999998888888889999999999889999999999999999999999999999999
Q ss_pred eeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHH
Q 041518 273 IIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVA 352 (765)
Q Consensus 273 ~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a 352 (765)
.++.+|++.++++..++|.+.+.++++++||+|++++||++++ +|++||||||||+++++++++.++|+|+++++++++
T Consensus 242 ~~~~~p~~~l~~~~~~~l~~~a~~~~~~lg~~G~~~ve~~~~~-~g~~~~iEiNpR~~g~~~~~~~~~G~dl~~~~~~~~ 320 (446)
T 3ouz_A 242 LIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFEFLVDK-NLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVA 320 (446)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT-TCCEEEEEEESSCCTTHHHHHHHHCCCHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEEEeC-CCCEEEEEeECCCCCcceeeeeeeCCCHHHHHHHHH
Confidence 9999999889999999999999999999999999999999997 678999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe-
Q 041518 353 NGEPLPLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA- 431 (765)
Q Consensus 353 ~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g- 431 (765)
+|++++ .+.++...||++++|+|+|+| .+|.|++|+|+.+++|. +++ ||+++++.+|+.|+++||||+||+|++|
T Consensus 321 ~G~~l~-~~~~~~~~g~ai~~ri~ae~~-~~~~p~~G~i~~~~~p~-~~~-vr~~~~~~~G~~v~~~~d~~~~~vi~~g~ 396 (446)
T 3ouz_A 321 EGYALP-SQESIKLNGHSIECRITAEDS-KTFLPSPGKITKYIPPA-GRN-VRMESHCYQDYSVPAYYDSMIGKLVVWAE 396 (446)
T ss_dssp TTCCCC-CGGGCCCCSEEEEEEEESBCT-TTCCBCCEECSEEECCC-STT-EEEEECCCTTCEECTTTCCEEEEEEEEES
T ss_pred CCCCCC-cCCCCCcceEEEEEEeeccCC-CccCCCCcEEeEEecCC-CCC-EEEEcccccCCEeCCccCCcceEEEEEcC
Confidence 999998 666788899999999999999 89999999999999998 788 9999999999999999999999999999
Q ss_pred --------------e-EEeccccCHHHHHHHhcCcCcccCcccccccccc
Q 041518 432 --------------K-TVAGVPTNINFLQKLAKHRAFESGDVETHFIEQH 466 (765)
Q Consensus 432 --------------~-~i~g~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~ 466 (765)
+ .|.|++||++||+++|+||+|++|+++|+||++|
T Consensus 397 ~~~~a~~~~~~al~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (446)
T 3ouz_A 397 DRNKAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH 446 (446)
T ss_dssp SHHHHHHHHHHHHHHCEEESSCCTHHHHHHHHTCHHHHTTCCCTTHHHHC
T ss_pred CHHHHHHHHHHHHhhCEEeCccCCHHHHHHHhCChhhccCCccccccccC
Confidence 6 9999999999999999999999999999999875
No 7
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=100.00 E-value=1.2e-73 Score=704.98 Aligned_cols=437 Identities=43% Similarity=0.720 Sum_probs=345.2
Q ss_pred CCCCCC-CCcCCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHH
Q 041518 26 SGCKSD-DKQQRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDA 104 (765)
Q Consensus 26 ~~~~~~-~~~~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~ 104 (765)
++.|+. ++.+|||||||+|+|+++++++++|+++|+++++++++++..+++.++||+.+.+++.+..++|+|.++|+++
T Consensus 19 ~~~~~~~~~~~m~kkILI~grGeia~~iiraar~lGi~vVaV~s~~d~~a~~~~~ADe~~~i~p~~~~~syld~~~Il~~ 98 (1236)
T 3va7_A 19 SHMASEAQKKKPFETVLIANRGEIAVRIMKTLKRMGIKSVAVYSDPDKYSQHVTDADFSVALHGRTAAETYLDIDKIINA 98 (1236)
T ss_dssp ---------CCSCSEEEECCCHHHHHHHHHHHHHHTCEEEEEECSGGGGCHHHHHSSEEEECCCSSTTTTTTCHHHHHHH
T ss_pred cccccCCCccCCCCEEEEEcCCHHHHHHHHHHHHCCCEEEEEEcCCCcCchhhhhCCEEEEeCCCcccccccCHHHHHHH
Confidence 343443 4566899999999999999999999999999999999999999999999999999888888899999999999
Q ss_pred HHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHH
Q 041518 105 AIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAA 184 (765)
Q Consensus 105 a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~ 184 (765)
++++++|+|+|+||+++|+..+++.|++.|++++||+++++++++||..+|++|+++|||+||++. ...+.+++.++++
T Consensus 99 a~~~~iDaI~pg~g~lsEn~~~a~~le~~Gi~~iGps~eai~~~~DK~~ak~ll~~aGIPvpp~~~-~v~s~eea~~~a~ 177 (1236)
T 3va7_A 99 AKKTGAQAIIPGYGFLSENADFSDRCSQENIVFVGPSGDAIRKLGLKHSAREIAERAKVPLVPGSG-LIKDAKEAKEVAK 177 (1236)
T ss_dssp HHHTTCSEEECCSSGGGGCHHHHHHHHTTTCEESSCCHHHHHHHHSTTHHHHHHHHTTCCCCC-----------------
T ss_pred HHHhCCCEEEECCccccccHHHHHHHHHCCCCeeCCCHHHHHHhcCHHHHHHHHHHcCCCCCCeeE-ecCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999752 3458889999999
Q ss_pred HhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeec
Q 041518 185 KIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDC 264 (765)
Q Consensus 185 ~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~ 264 (765)
++|||+||||..|+||+||++|+|.+|+.++++.+.+++...|+++.+||||||+|++|+++++++|++|+++++++++|
T Consensus 178 ~iGyPvVVKP~~GgGGkGV~iv~s~eEL~~a~~~~~~~a~~~~~~~~vlVEeyI~G~rEisV~vl~Dg~g~vv~l~~rd~ 257 (1236)
T 3va7_A 178 KLEYPVMVKSTAGGGGIGLQKVDSEDDIERVFETVQHQGKSYFGDAGVFMERFVNNARHVEIQMMGDGFGKAIAIGERDC 257 (1236)
T ss_dssp -------------------------------------------------------CCEEEEEEEEEESSSCEEEEEEEEE
T ss_pred HcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhccCCCcEEEeeccCCCeEEEEEEEecCCceEEEEeeeee
Confidence 99999999999999999999999999999999999888777788889999999998899999999999999999999999
Q ss_pred cccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCH
Q 041518 265 SVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDL 344 (765)
Q Consensus 265 s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl 344 (765)
+.+++|++.++.+|++.++++.+++|.+.+.++++++||+|++++||+++++++++||||||||+|++|++++.++|+|+
T Consensus 258 s~qr~~~k~~e~~Pa~~l~~~~~~~l~~~a~~~~~alg~~G~~~VEfivd~d~g~~y~iEINpRl~g~~~~te~vtGvDl 337 (1236)
T 3va7_A 258 SLQRRNQKVIEETPAPNLPEATRAKMRAASERLGSLLKYKCAGTVEFIYDEQRDEFYFLEVNARLQVEHPITEMVTGLDL 337 (1236)
T ss_dssp EEEETTEEEEEEESCSSCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEEEEEEEECSCCTTHHHHHHHHCCCH
T ss_pred eeeecCcceEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECCCCcEEEEEEECCCCCccHHHHHHHCCCH
Confidence 99999999999999988999999999999999999999999999999999744889999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcc
Q 041518 345 VEWQIRVANGEPLPLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMI 424 (765)
Q Consensus 345 ~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~ 424 (765)
+++++++++|+++++.+.++..+||++++|+|||+|.++|.|++|+|..+.+|. + +|+++++++|++|+++||||+
T Consensus 338 v~~~l~~a~G~~l~~~~~~~~~~g~Ai~~riyaedp~~~f~p~~G~i~~~~~p~---g-vrvd~~v~~G~~V~~~yds~l 413 (1236)
T 3va7_A 338 VEWMLRIAANDSPDFDNTKIEVSGASIEARLYAENPVKDFRPSPGQLTSVSFPS---W-ARVDTWVKKGTNVSAEYDPTL 413 (1236)
T ss_dssp HHHHHHHHTTCCCCGGGCCCCCCSEEEEEEEESEETTTTTEECCEECCEEECCT---T-SEEEECCCTTCEECSSSCCEE
T ss_pred HHHHHHHHCCCCCCCccccccccceEEEEEEecCCcccccCCCCceEEEEEcCC---c-cEecccccCCCEeCCCCCCce
Confidence 999999999999987777777899999999999999999999999999999986 4 899999999999999999999
Q ss_pred eEEEEEe---------------e-EEeccccCHHHHHHHhcCcCcccCccccccccccc
Q 041518 425 ANLWYGA---------------K-TVAGVPTNINFLQKLAKHRAFESGDVETHFIEQHK 467 (765)
Q Consensus 425 ~~~i~~g---------------~-~i~g~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~~ 467 (765)
||+|++| + .|.|++||++||++++.||+|++|+++|+||+++.
T Consensus 414 a~vi~~g~~r~eA~~~~~~al~~~~i~G~~tn~~~~~~~~~~~~f~~~~~~t~~~~~~~ 472 (1236)
T 3va7_A 414 AKIIVHGKDRNDAIMKLNQALNETAVYGCITNIDYLRSIASSKMFKEAKVATKVLDSFD 472 (1236)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTCEEESSCCSHHHHHHHHHCHHHHHTCCCTTGGGGCC
T ss_pred EEEEEEeCCHHHHHHHHHHHhhCEEEeCcccCHHHHHHHhCCHHHhCCCCcchhhhhcC
Confidence 9999999 6 99999999999999999999999999999999863
No 8
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=2e-70 Score=676.82 Aligned_cols=431 Identities=40% Similarity=0.715 Sum_probs=341.9
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCC-------CcCcCCCCHHHHHHHHH
Q 041518 34 QQRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPP-------PARLSYLNGSSIVDAAI 106 (765)
Q Consensus 34 ~~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~-------~~~~syld~~~Il~~a~ 106 (765)
..|++||||+|||++|++++++|+++|+++++++++++..+.+.++||+++.+++. ...++|+|.+.|+++|+
T Consensus 11 ~~~~~~~lianrGeia~riiraa~elGi~vvav~s~~d~~a~~~~~ADe~~~i~~~~~~~~~~~~~~~yld~~~I~~~a~ 90 (1165)
T 2qf7_A 11 GGPISKILVANRSEIAIRVFRAANELGIKTVAIWAEEDKLALHRFKADESYQVGRGPHLARDLGPIESYLSIDEVIRVAK 90 (1165)
T ss_dssp -CCCCEEEECCCHHHHHHHHHHHHHTTCEEEEEECGGGTTCHHHHSSSSEEECSCSTTSSSCCCTTHHHHCHHHHHHHHH
T ss_pred CCcceEEEEcCCcHHHHHHHHHHHHcCCEEEEEECCCcccchhHHhCCEEEEcCCcccccccCCccccccCHHHHHHHHH
Confidence 34899999999999999999999999999999999999888999999999999774 44568999999999999
Q ss_pred HhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHh
Q 041518 107 RTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKI 186 (765)
Q Consensus 107 ~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~i 186 (765)
+.++|+|||+|||++|++.+++.|++.|++++||+++++++++||..+|++|+++|||+||++.....+.+++.++++++
T Consensus 91 ~~~iD~V~pg~g~lsE~~~~a~~le~~Gi~~iGp~~~ai~~~~DK~~~k~~l~~~GIPvp~~~~~~v~s~eea~~~a~~i 170 (1165)
T 2qf7_A 91 LSGADAIHPGYGLLSESPEFVDACNKAGIIFIGPKADTMRQLGNKVAARNLAISVGVPVVPATEPLPDDMAEVAKMAAAI 170 (1165)
T ss_dssp HHTCSEEECCSSTTTTCHHHHHHHHHTTCEESSCCHHHHHHHHSHHHHHHHHHHTTCCBC--------------------
T ss_pred HhCCCEEEECCCchhcCHHHHHHHHHcCCceECCCHHHHHHHCCHHHHHHHHHHcCCCCCCeeCcCCCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999998732334888899999999
Q ss_pred CCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccc
Q 041518 187 GYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSV 266 (765)
Q Consensus 187 g~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~ 266 (765)
|||+||||..|+||+||+++++.+|+.++++.+.+++...|+++.++||+||++++|+++++++|++|+++++++|+|+.
T Consensus 171 gyPvVVKp~~g~GG~Gv~iv~s~eEL~~a~~~~~~~a~~~fg~~~vlVEefI~gg~EisV~vl~D~~G~vv~l~~r~~s~ 250 (1165)
T 2qf7_A 171 GYPVMLKASWGGGGRGMRVIRSEADLAKEVTEAKREAMAAFGKDEVYLEKLVERARHVESQILGDTHGNVVHLFERDCSV 250 (1165)
T ss_dssp -------------------------------------------------CCCSSEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred CCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHHHHHhhcCCCcEEEEEeccCCcEEEEEEEEcCCCcEEEEEeecccc
Confidence 99999999999999999999999999999999988877778888999999999889999999999999999999999999
Q ss_pred cccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEE-CCCCcEEEEEecccCCccccccceecCCCHH
Q 041518 267 QRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVD-TVSDQFYFMEMNTRLQVEHPVTEMIVDQDLV 345 (765)
Q Consensus 267 ~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~-~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~ 345 (765)
++++++.++.+|++.++++.+++|.+.+.++++++||+|++++||+++ + +|++||||||||+|+++++++.++|+|++
T Consensus 251 ~r~~~~~~e~~Pa~~l~~~~~~~i~~~a~~i~~alg~~G~~~vEf~vd~~-dg~~~~iEiNpR~~~~~~vte~~tGiDl~ 329 (1165)
T 2qf7_A 251 QRRNQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYIGAGTVEYLMDAD-TGKFYFIEVNPRIQVEHTVTEVVTGIDIV 329 (1165)
T ss_dssp EETTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETT-TTEEEEEEEECSCCTTHHHHHHHHCCCHH
T ss_pred eecccceEEecccccCCHHHHHHHHHHHHHHHHHcCCCcceeEEEEEECC-CCCEEEEEEEcCCCCCchhhhhhhCCCHH
Confidence 999999999999988999999999999999999999999999999999 5 78999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCC------CCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecc-cCCCeeCC
Q 041518 346 EWQIRVANGEPLPL------SQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGV-EQGDTVSM 418 (765)
Q Consensus 346 ~~~i~~a~G~~l~~------~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v-~~G~~v~~ 418 (765)
++++++++|.+++. .|.++..+|||+++|+++|+|.++|.|++|+|+.++.|. +++ +|++.++ .+|+.|++
T Consensus 330 ~~~i~~a~G~~l~~~~~g~p~q~~~~~~g~Ai~~ri~ae~P~~~f~p~~G~I~~~~~~~-~~g-vrvd~g~~~~G~~v~~ 407 (1165)
T 2qf7_A 330 KAQIHILDGAAIGTPQSGVPNQEDIRLNGHALQCRVTTEDPEHNFIPDYGRITAYRSAS-GFG-IRLDGGTSYSGAIITR 407 (1165)
T ss_dssp HHHHHHHTTCCTTSGGGTCCCGGGCCCCSEEEEEEEESEETTTTTEECCEECCEEECCC-CTT-EEEECCSCCTTCEECS
T ss_pred HHHHHHHcCCCccccccccccccccccCcEEEEEEEEecCCccCcCCCCcEEEEEecCC-CCc-eEeeeccCCCCCEeCC
Confidence 99999999998862 234466789999999999999999999999999999887 688 9999887 68999999
Q ss_pred ccCCcceEEEEEe---------------e-EEeccccCHHHHHHHhcCcCcccCccccccccccc
Q 041518 419 HYDPMIANLWYGA---------------K-TVAGVPTNINFLQKLAKHRAFESGDVETHFIEQHK 467 (765)
Q Consensus 419 ~~d~~~~~~i~~g---------------~-~i~g~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~~ 467 (765)
+|||++||+|+|| + .|.|+.|||+||++++.||+|.+|+++|+||+++.
T Consensus 408 ~~d~~l~~vi~~g~t~~eA~~~~~~al~~i~i~G~~tni~~~~~~~~~~~f~~~~~~t~~~~~~~ 472 (1165)
T 2qf7_A 408 YYDPLLVKVTAWAPNPLEAISRMDRALREFRIRGVATNLTFLEAIIGHPKFRDNSYTTRFIDTTP 472 (1165)
T ss_dssp SSCCEEEEEEEEESSHHHHHHHHHHHHHHCEEESSCCSHHHHHHHHTSHHHHTTCCCTTTTTTCG
T ss_pred CCCCceEEEEEEeCCHHHHHHHHHHHhhcEEEecccCCHHHHHHHhcCHHhhcCCccchhhhcCh
Confidence 9999999999999 5 99999999999999999999999999999999873
No 9
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=100.00 E-value=1.5e-67 Score=598.20 Aligned_cols=430 Identities=49% Similarity=0.793 Sum_probs=400.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
||||||+|+|+++++++++|+++|+++++++++++..+++.+++|+.+.+++.....+|.|.+.|++++++.++|+|+|+
T Consensus 1 ~k~ilI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~v~~~ 80 (451)
T 2vpq_A 1 MKKVLIANRGEIAVRIIRACRDLGIQTVAIYSEGDKDALHTQIADEAYCVGPTLSKDSYLNIPNILSIATSTGCDGVHPG 80 (451)
T ss_dssp -CEEEECCCHHHHHHHHHHHHHTTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHTTCSEEECC
T ss_pred CceEEEeCCCHHHHHHHHHHHHcCCEEEEEecccccccchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEEC
Confidence 58999999999999999999999999999998888888899999999988876667799999999999999999999999
Q ss_pred CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecC
Q 041518 117 YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTH 196 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~ 196 (765)
+|+++|++.+++.+++.|++++||+++++++++||..+|++|+++|||+||++.....+.+++.++++++|||+||||..
T Consensus 81 ~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~~ 160 (451)
T 2vpq_A 81 YGFLAENADFAELCEACQLKFIGPSYQSIQKMGIKDVAKAEMIKANVPVVPGSDGLMKDVSEAKKIAKKIGYPVIIKATA 160 (451)
T ss_dssp SSTTTTCHHHHHHHHTTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCSBCSSCBSCHHHHHHHHHHHCSSEEEEETT
T ss_pred CCccccCHHHHHHHHHcCCeEECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccCcCCHHHHHHHHHhcCCcEEEEECC
Confidence 99999999899999999999999999999999999999999999999999976222348999999999999999999999
Q ss_pred CCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeeeee
Q 041518 197 GGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKIIEE 276 (765)
Q Consensus 197 g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~e~ 276 (765)
|+||+||+++++.+|+.++++.+..++...|++..++||+||+|++|++++++++++|+++.+++++|+.+++|++..+.
T Consensus 161 g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 240 (451)
T 2vpq_A 161 GGGGKGIRVARDEKELETGFRMTEQEAQTAFGNGGLYMEKFIENFRHIEIQIVGDSYGNVIHLGERDCTIQRRMQKLVEE 240 (451)
T ss_dssp CCTTCSEEEESSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCCSEEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEecCCCeEEEEEEEEcCCCCEEEEeccccchhccccceEEE
Confidence 99999999999999999999998877666677789999999997789999999998899999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEE-CCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcCC
Q 041518 277 APAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVD-TVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANGE 355 (765)
Q Consensus 277 ~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~-~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G~ 355 (765)
.|++.++++..+++.+.+.++++++||+|++++||+++ + +|++||||+|||+++++++++.++|+|++++++++++|.
T Consensus 241 ~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~~-~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~ 319 (451)
T 2vpq_A 241 APSPILDDETRREMGNAAVRAAKAVNYENAGTIEFIYDLN-DNKFYFMEMNTRIQVEHPVTEMVTGIDLVKLQLQVAMGD 319 (451)
T ss_dssp ESCTTCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETT-TTEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECC-CCCEEEEEeeCCCCCceehhhHHhCCCHHHHHHHHHCCC
Confidence 99977999999999999999999999999999999999 6 788999999999999899999999999999999999999
Q ss_pred CCCCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe----
Q 041518 356 PLPLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA---- 431 (765)
Q Consensus 356 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g---- 431 (765)
+++..+.++.+.++++.+|+|+++|..+|.|.+|++..+..|. +++ |+++.++.+|+.++++|++++|+++++|
T Consensus 320 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~-~~~-v~~~~~~~~g~~~~~~~~~~~g~v~~~g~~~~ 397 (451)
T 2vpq_A 320 VLPYKQEDIKLTGHAIEFRINAENPYKNFMPSPGKIEQYLAPG-GYG-VRIESACYTNYTIPPYYDSMVAKLIIHEPTRD 397 (451)
T ss_dssp CCSCCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCSEEECCC-STT-EEEECCCCTTCBCCTTTCCEEEEEEEEESSHH
T ss_pred CCCCcccccCcCceEeeeEeeeeccccccCCCCCEEeEEECCC-CCC-cccccccccCCccCcccccccEEEEEEeCCHH
Confidence 9886555677789999999999999888999999999999886 678 9999999999999999999999999999
Q ss_pred -----------e-EEeccccCHHHHHHHhcCcCcccCccccccccccccc
Q 041518 432 -----------K-TVAGVPTNINFLQKLAKHRAFESGDVETHFIEQHKDE 469 (765)
Q Consensus 432 -----------~-~i~g~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~~~~ 469 (765)
+ .+.|+.||++||++++.||+|++|+++|+||++++..
T Consensus 398 ea~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (451)
T 2vpq_A 398 EAIMAGIRALSEFVVLGIDTTIPFHIKLLNNDIFRSGKFNTNFLEQNSIM 447 (451)
T ss_dssp HHHHHHHHHHHTCEEESSCCSHHHHHHHHTCHHHHHTCCCTTTTTTSCTT
T ss_pred HHHHHHHHHHhccEEeCcCCCHHHHHHHhCCHhhhcCCCccHHHhhhhhh
Confidence 5 9999999999999999999999999999999988544
No 10
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=2.1e-67 Score=596.91 Aligned_cols=429 Identities=47% Similarity=0.800 Sum_probs=399.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
|||||||+|+|+++++++++|+++|+++++++++++..+++.+++|+.+.++|. ..++|.|.+.|++++++.++|+|+|
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~-~~~~~~d~~~l~~~~~~~~~d~v~~ 79 (451)
T 1ulz_A 1 MVNKVLVANRGEIAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIGTD-PLDTYLNKQRIINLALEVGADAIHP 79 (451)
T ss_dssp CCSSEEECCCHHHHHHHHHHHHHHTCCEEEEECGGGTTCHHHHHSSEEEECCSS-TTHHHHCHHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCcHHHHHHHHHHHHcCCeEEEEechhhcccchhhhCcEEEEcCCC-cccccCCHHHHHHHHHHcCCCEEEE
Confidence 689999999999999999999999999999998888888899999999988765 5568999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeec
Q 041518 116 GYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPT 195 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~ 195 (765)
++|+++|++.+++.+++.|++++||+++++.+++||..+|++|+++|||+|+++.....+.+++.++++++|||+||||.
T Consensus 80 ~~g~~~e~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~g~PvvvKp~ 159 (451)
T 1ulz_A 80 GYGFLAENAEFAKMCEEAGITFIGPHWKVIELMGDKARSKEVMKKAGVPVVPGSDGVLKSLEEAKALAREIGYPVLLKAT 159 (451)
T ss_dssp CSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHTTCCBCCBCSSSCCCHHHHHHHHHHHCSSEEEEEC
T ss_pred CCCccccCHHHHHHHHHCCCeEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHcCCCEEEEEC
Confidence 99999999988999999999999999999999999999999999999999998622234889999999999999999999
Q ss_pred CCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeeee
Q 041518 196 HGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKIIE 275 (765)
Q Consensus 196 ~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~e 275 (765)
.|+||+||+++++.+|+.++++.+..++...|++..+++|+||+|++|++++++++.+|+++.+++++|+.+++|++..+
T Consensus 160 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~~~~ 239 (451)
T 1ulz_A 160 AGGGGRGIRICRNEEELVKNYEQASREAEKAFGRGDLLLEKFIENPKHIEYQVLGDKHGNVIHLGERDCSIQRRNQKLVE 239 (451)
T ss_dssp SSSSCCSCEEESSHHHHHHHHHHHHHHHHHTTSCCCEEEEECCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEE
T ss_pred CCCCCccEEEeCCHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccCCeEEEEEEEEcCCCCEEEEeeeeccccccccccee
Confidence 99999999999999999999999888777778788999999999889999999999889999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcCC
Q 041518 276 EAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANGE 355 (765)
Q Consensus 276 ~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G~ 355 (765)
.+|++.++++..+++.+.+.++++++||+|++++||++++ +|++||||+|||+++++++++.++|+|++++++++++|.
T Consensus 240 ~~P~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~-~g~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G~ 318 (451)
T 1ulz_A 240 IAPSLILTPEKREYYGNIVTKAAKEIGYYNAGTMEFIADQ-EGNLYFIEMNTRIQVEHPVSEMVTGIDIVKWQIKIAAGE 318 (451)
T ss_dssp EESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT-TCCEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHTTC
T ss_pred ECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEeC-CCCEEEEEeeCCCCccchHHHHHhCCCHHHHHHHHHcCC
Confidence 9999779999999999999999999999999999999997 788999999999999899999999999999999999999
Q ss_pred CCCCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe----
Q 041518 356 PLPLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA---- 431 (765)
Q Consensus 356 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g---- 431 (765)
++++.+.++.+.++++++|+|+++|..+|.|.+|+|..+..|. .++ +|++.++.+|+.++++||+++|+++++|
T Consensus 319 ~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~p~~g~i~~~~~~~-~~~-v~~~~~~~~g~~~~~~~~~~~g~v~~~g~~~~ 396 (451)
T 1ulz_A 319 PLTIKQEDVKFNGYAIECRINAEDPKKNFAPSTRVIERYYVPG-GFG-IRVEHAAARGFEVTPYYDSMIAKLITWAPTWD 396 (451)
T ss_dssp CCCCCGGGCCCCSEEEEEEEESEEGGGTTEECCSBCCSEECCC-STT-EEEEECCCTTCBCCSSSCCEEEEEEEEESSHH
T ss_pred CCCCccccCCCceEEEEEeccccCcccCcCCCCceeceEECCC-CCC-cccccCccCCCEecccccchheEEEEECCCHH
Confidence 9886555567788999999999999888999999999999887 688 9999999999999999999999999999
Q ss_pred -----------e-EEeccccCHHHHHHHhcCcCcccCcccccccccccc
Q 041518 432 -----------K-TVAGVPTNINFLQKLAKHRAFESGDVETHFIEQHKD 468 (765)
Q Consensus 432 -----------~-~i~g~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~~~ 468 (765)
+ .+.|+.|||+||+++|.||+|++|+++|+||+++..
T Consensus 397 ea~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (451)
T 1ulz_A 397 EAVERMRAALETYEITGVKTTIPLLINIMKEKDFKAGKFTTKYLEEHPE 445 (451)
T ss_dssp HHHHHHHHHHHTCEECSSCCSHHHHHHHHHCHHHHHTCCCTTTTTTCGG
T ss_pred HHHHHHHHHHhhcEEeCccCCHHHHHHHhCCHHHhcCCCcchhhhhhHh
Confidence 4 889999999999999999999999999999999853
No 11
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=100.00 E-value=1.9e-67 Score=611.46 Aligned_cols=427 Identities=34% Similarity=0.525 Sum_probs=387.7
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHC---------CCeEEEEecC--CCCCCcccccccEEEEcCCCCcCcCCCCHHHHH
Q 041518 34 QQRIEKILIANRGEIAYRIMRTAKRL---------GIRTVAVYSD--ADRDSLHVKSADEAIRIGPPPARLSYLNGSSIV 102 (765)
Q Consensus 34 ~~~~kkILI~g~G~~a~~iiraar~~---------Gi~vvav~s~--~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il 102 (765)
.+|+|||||+|+|+++++++++|+++ |++++++++. .++.+++.++||+++.+++....++|+|.+.|+
T Consensus 44 ~~~~kkILI~g~g~~a~~iira~~~~G~~vi~~d~gi~~v~v~s~~D~~~~~~~~~~aD~~~~ip~~~~~~~y~d~~~l~ 123 (554)
T 1w96_A 44 HTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIV 123 (554)
T ss_dssp CBCCCEEEECCCHHHHHHHHHHHHHHHHHHHSCTTSSEEEEEECHHHHHTTCHHHHHSSEEEECCCSSGGGTTTCHHHHH
T ss_pred cccccEEEEECCCHHHHHHHHHHHHcCCcceecccCceEEEEecccccccCChhhhhCCEEEEcCCCCccccccCHHHHH
Confidence 35789999999999999999999998 5677888763 347778999999999998777778999999999
Q ss_pred HHHHHhCCCEEEeCCCcccccHHHHHHHHHCC--CcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCcccc---------
Q 041518 103 DAAIRTGAQAIHPGYGFLSESADFAQLCGDNG--LTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHG--------- 171 (765)
Q Consensus 103 ~~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~G--l~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~--------- 171 (765)
++|+++++|+|+|++|+++|++.++..+++.| ++++||+++++++++||..+|++|+++|||+|++...
T Consensus 124 ~~a~~~~id~Vi~g~G~~sE~~~~~~~l~~~g~~i~~~gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~ 203 (554)
T 1w96_A 124 DIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDE 203 (554)
T ss_dssp HHHHHTTCSEEECCSSTTTTCTHHHHHHHHSTTCCEESSCCHHHHHHSCSHHHHHHHHHHTTCCBCCBTTTTCCCCEECT
T ss_pred HHHHHhCCCEEEECCCccccCHHHHHHHHHcCCeEEEeCCCHHHHHHHhCHHHHHHHHHHCCCCcCCccccccccccccc
Confidence 99999999999999999999999999999999 9999999999999999999999999999999998653
Q ss_pred ---------------CCCCHHHHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEec
Q 041518 172 ---------------NEQDIDLMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEK 236 (765)
Q Consensus 172 ---------------~~~s~~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEe 236 (765)
...+.+++.++++++|||+||||..|+||+||+++++.+|+.++++.+..++. ...++||+
T Consensus 204 ~~~l~~ip~~~~~~~~~~~~~e~~~~~~~~g~PvVvKp~~g~gg~Gv~~v~~~~el~~a~~~~~~~~~----~~~vlvEe 279 (554)
T 1w96_A 204 KTGLVSVDDDIYQKGCCTSPEDGLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIP----GSPIFIMK 279 (554)
T ss_dssp TTCCEECCHHHHGGGSCSSHHHHHHHHHHHCSSEEEEETTCCTTTTEEEECSHHHHHHHHHHHHHHST----TCCEEEEE
T ss_pred cccccccccccccccCCCCHHHHHHHHHHcCCCEEEEECCCCCCceEEEECCHHHHHHHHHHHHhhcc----CCCEEEEE
Confidence 13588999999999999999999999999999999999999999998876532 47899999
Q ss_pred ccCCCeeEEEEEEEeccccEEEEEeeeccccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECC
Q 041518 237 YITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTV 316 (765)
Q Consensus 237 yI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~ 316 (765)
||+|++|+++++++|++|+++.+++++|+.++++++.++.+|++.++++..+++.+.+.++++++||+|++++||++++.
T Consensus 280 ~i~g~~e~sv~vl~d~~G~vv~l~~~~~~~~~~~~k~~~~~P~~~l~~~~~~~i~~~a~~~~~alg~~G~~~ve~~~~~~ 359 (554)
T 1w96_A 280 LAGRARHLEVQLLADQYGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHD 359 (554)
T ss_dssp CCCSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEESCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECTT
T ss_pred ecCCCcEEEEEEEEcCCCCEEEEeeeeeeeEeeccceeeeCCCcCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEECC
Confidence 99988999999999988899999999999999999999999997799999999999999999999999999999999832
Q ss_pred CCcEEEEEecccCCccccccceecCCCHHHHHHHHHcCCCCCCC-----------------------------CCCcccc
Q 041518 317 SDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANGEPLPLS-----------------------------QSEVPLL 367 (765)
Q Consensus 317 ~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G~~l~~~-----------------------------~~~~~~~ 367 (765)
+|++||||||||+|+++++++.++|+|++++++++++|.+++.. +.++...
T Consensus 360 dg~~~~iEiN~R~~g~~~~~~~~~G~dl~~~~~~~a~G~~l~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 439 (554)
T 1w96_A 360 DGKFYFLELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRRPIPK 439 (554)
T ss_dssp TCCEEEEEEECSCCTTTHHHHHHHCCCHHHHHHHHHTTCCGGGCHHHHHHTTCCTTCCCCCCTTCCSHHHHHHCCCCCCC
T ss_pred CCCEEEEEeeCCCCcceehhhhhcCCCHHHHHHHHHcCCCcccccchhhhccCCccccccccccccccccccccccCCCC
Confidence 78899999999999999999999999999999999999987521 1134578
Q ss_pred eEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe---------------e
Q 041518 368 GHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA---------------K 432 (765)
Q Consensus 368 g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g---------------~ 432 (765)
||++++|+|+++|.++|.|.+|+|..+.+|. .++ ||++.++++|+.|+++||+++|++|++| +
T Consensus 440 g~~i~~r~~~~~~~~~~~p~~G~i~~~~~~~-~~~-v~~~~~~~~g~~i~~~~~~~~~~vi~~g~~~~eA~~~~~~al~~ 517 (554)
T 1w96_A 440 GHCTACRITSEDPNDGFKPSGGTLHELNFRS-SSN-VWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQASRKHMVVALKE 517 (554)
T ss_dssp SEEEEEEEEEECCCCSSCCCSSSEEEECCSS-CSS-EEEEEEECCSCSSCSSCSEEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEccCCCCCcccCCeEEeEEecCC-CCC-EEEeeecccCCccCCCCCCceEEEEEEeCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999887 678 9999999999999999999999999999 5
Q ss_pred -EEec-cccCHHHHHHHhcCcCcccCcccccccccc
Q 041518 433 -TVAG-VPTNINFLQKLAKHRAFESGDVETHFIEQH 466 (765)
Q Consensus 433 -~i~g-~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~ 466 (765)
.|.| +.|||+||++||+||+|++|+++|+||++.
T Consensus 518 i~i~g~~~~~i~~~~~~~~~~~f~~~~~~t~~~~~~ 553 (554)
T 1w96_A 518 LSIRGDFRTTVEYLIKLLETEDFEDNTITTGWLDDL 553 (554)
T ss_dssp HTTCC----CCHHHHHHHTSHHHHTTCCCTTHHHHH
T ss_pred cEEEeeccCCHHHHHHHhcCHhhhcCCccchHhhhh
Confidence 8899 999999999999999999999999999864
No 12
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=100.00 E-value=9.4e-67 Score=593.27 Aligned_cols=433 Identities=43% Similarity=0.737 Sum_probs=397.1
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCC-CcCcCCCCHHHHHHHHHHhCCCE
Q 041518 34 QQRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPP-PARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 34 ~~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~-~~~~syld~~~Il~~a~~~~~Da 112 (765)
.+|||||||+|+|+++++++++|+++|+++++++++++..+++.+++|+.+.+++. ...++|.|.+.|++++++.++|+
T Consensus 3 ~~~~k~ILI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~y~d~~~l~~~~~~~~id~ 82 (461)
T 2dzd_A 3 TRRIRKVLVANRGEIAIRVFRACTELGIRTVAIYSKEDVGSYHRYKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDVDA 82 (461)
T ss_dssp CCCCSEEEECSCHHHHHHHHHHHHHHTCEEEEEECGGGTTCTHHHHSSSEEECSTTSCTTGGGTCHHHHHHHHHHTTCCE
T ss_pred CCcCcEEEEECCcHHHHHHHHHHHHcCCEEEEEECCcccccchhhhCCEEEEcCCCCCccccccCHHHHHHHHHHhCCCE
Confidence 35789999999999999999999999999999999888888899999999988753 33457899999999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEE
Q 041518 113 IHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILI 192 (765)
Q Consensus 113 V~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVV 192 (765)
|+|++|+++|++.+++.+++.|++++||+++++.+++||..+|++|+++|||+|+++.....+.+++.++++++|||+||
T Consensus 83 v~~~~g~~~E~~~~~~~~~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g~Pvvv 162 (461)
T 2dzd_A 83 IHPGYGFLSENIQFAKRCREEGIIFIGPNENHLDMFGDKVKARHAAVNAGIPVIPGSDGPVDGLEDVVAFAEAHGYPIII 162 (461)
T ss_dssp EECCSSSSTTCHHHHHHHHHTTCEESSCCHHHHHHTTSHHHHHHHHHHTTCCBCCBCSSCCSSHHHHHHHHHHHCSCEEE
T ss_pred EEECCCccccCHHHHHHHHHcCCEEECCCHHHHHHhhCHHHHHHHHHHcCCCCCCCcccCcCCHHHHHHHHHhcCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999998632234899999999999999999
Q ss_pred eecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeecccccccee
Q 041518 193 KPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQK 272 (765)
Q Consensus 193 KP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k 272 (765)
||..|+||+||+++++.+|+.++++.+..++...|++..++||+||+|++|++++++++++|+++.+++++|+.+++|++
T Consensus 163 Kp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~v~~~~~G~~~~~~~~~~~~~~~~~~ 242 (461)
T 2dzd_A 163 KAALGGGGRGMRIVRSKSEVKEAFERAKSEAKAAFGSDEVYVEKLIENPKHIEVQILGDYEGNIVHLYERDCSVQRRHQK 242 (461)
T ss_dssp EESTTCSSSSEEEECCGGGHHHHHHHHHHHHHHHTSCCCEEEEECCCSCEEEEEEEEECTTCCEEEEEEEEEEEEETTEE
T ss_pred EeCCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEECCCCCeEEEEEEEEcCCCCEEEEEeccccccccccc
Confidence 99999999999999999999999999888776778788999999999889999999999889999889999999999999
Q ss_pred eeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHH
Q 041518 273 IIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVA 352 (765)
Q Consensus 273 ~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a 352 (765)
..+.+|++.++++..+++.+.+.++++++||.|.+++||++++ |++||||+|||+++++++++.++|+|+++++++++
T Consensus 243 ~~~~~P~~~l~~~~~~~i~~~a~~~~~~lg~~g~~~ve~~~~~--~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~ 320 (461)
T 2dzd_A 243 VVEVAPSVSLSDELRQRICEAAVQLMRSVGYVNAGTVEFLVSG--DEFYFIEVNPRIQVEHTITEMITGIDIVQSQILIA 320 (461)
T ss_dssp EEEEESCTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEET--TEEEEEEEESSCCGGGHHHHHHHCCCHHHHHHHHH
T ss_pred eEEECCcccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEeC--CCEEEEEEECCCCCceeeEEeecCCCHHHHHHHHH
Confidence 9999999889999999999999999999999999999999995 78999999999999888999999999999999999
Q ss_pred cCCCCCCC------CCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecc-cCCCeeCCccCCcce
Q 041518 353 NGEPLPLS------QSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGV-EQGDTVSMHYDPMIA 425 (765)
Q Consensus 353 ~G~~l~~~------~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v-~~G~~v~~~~d~~~~ 425 (765)
+|++++.. +..+...|+++++|+++++|..+|.|.+|.+..++.|. +++ +|++..+ .+|++|+++||+++|
T Consensus 321 ~G~~l~~~~~~~~~~~~~~~~g~~~~~ri~~~~~~~~~~p~~g~i~~~~~~~-~~~-v~~~~~~~~~G~~i~~~~~~~~~ 398 (461)
T 2dzd_A 321 DGCSLHSHEVGIPKQEDIRINGYAIQSRVTTEDPLNNFMPDTGKIMAYRSGG-GFG-VRLDAGNGFQGAVITPYYDSLLV 398 (461)
T ss_dssp TTCCTTSTTTCCCCGGGCCCCSEEEEEEEESEEGGGTTEECCEECSEEECCC-CTT-EEEEESSCSTTCEECSSSCCEEE
T ss_pred cCCCccccccccccccccccceeEEEeeecccCCccCccCCCCeeeEEecCC-CCC-eEeecccccCCCCcCcccchhhh
Confidence 99988632 11245689999999999999888999999999999987 688 9998874 899999999999999
Q ss_pred EEEEEe---------------e-EEeccccCHHHHHHHhcCcCcccCccccccccccccccc
Q 041518 426 NLWYGA---------------K-TVAGVPTNINFLQKLAKHRAFESGDVETHFIEQHKDELF 471 (765)
Q Consensus 426 ~~i~~g---------------~-~i~g~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~~~~~~ 471 (765)
+++++| + .+.|+.|||+|+.+++.+|+|++|+++|+||+++ .+++
T Consensus 399 ~v~~~g~~~~~a~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 459 (461)
T 2dzd_A 399 KLSTWALTFEQAARKMLRNLREFRIRGIKTNIPFLENVVQHPKFLSGEYDTSFIDTT-PELF 459 (461)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTCEEESSCCSHHHHHHHHHSHHHHTSCCCTTHHHHC-GGGG
T ss_pred eeEEEcCCHHHHHHHHHHHHHhcEEeCCcCCHHHHHHHhCChhhhCCCccchhhhcc-hhhh
Confidence 999999 5 8999999999999999999999999999999987 3443
No 13
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=100.00 E-value=3.1e-66 Score=587.04 Aligned_cols=428 Identities=46% Similarity=0.768 Sum_probs=396.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
|||||||+|+|+++++++++|+++|+++++++++++..+++.+++|+.+.++|....++|.|.+.|+++++++++|+|+|
T Consensus 1 m~k~ilI~g~g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~~~~~~~~d~~~l~~~~~~~~~d~v~~ 80 (449)
T 2w70_A 1 MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHP 80 (449)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCCEEEC
T ss_pred CCceEEEeCCcHHHHHHHHHHHHcCCeEEEEeccccccCchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEE
Confidence 68999999999999999999999999999999888888889999999998766666678999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHH-HHHHHHhCCcEEEee
Q 041518 116 GYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLM-KSEAAKIGYPILIKP 194 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~-~~~~~~ig~PvVVKP 194 (765)
++|+++|++.+++.+++.|++++||+++++.+++||..+|++|+++|||+|+++.....+.+++ .++++++|||+||||
T Consensus 81 ~~g~~~e~~~~~~~~e~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~g~PvvvKp 160 (449)
T 2w70_A 81 GYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA 160 (449)
T ss_dssp CSSTTTTCHHHHHHHHHTTCEESSSCHHHHHHHHSHHHHHHHHHHHTCCBCSBCSSCCCSCHHHHHHHHHHHCSSEEEEE
T ss_pred CCCCcccCHHHHHHHHHcCCceECCCHHHHHHhcCHHHHHHHHHHcCCCcCCCcccccCCHHHHHHHHHHHhCCcEEEEE
Confidence 9999999998899999999999999999999999999999999999999999862223478888 888999999999999
Q ss_pred cCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeee
Q 041518 195 THGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKII 274 (765)
Q Consensus 195 ~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~ 274 (765)
..|+||+||++++|.+|+.++++.+..++...|++..++||+||+|++|++++++++.+|+++.++.++|+.+++|++..
T Consensus 161 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~~~~~~~~lvEe~i~g~~e~~v~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 240 (449)
T 2w70_A 161 SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKVV 240 (449)
T ss_dssp TTCCTTTTCEEECSHHHHHHHHHHHHHHHHHHHSCCCEEEEECCSSCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEE
T ss_pred CCCCCCCCEEEeCCHHHHHHHHHHHHHHHHhhcCCCcEEEEeccCCCeEEEEEEEEcCCCCEEEEeceecccccCCccee
Confidence 99999999999999999999999988776666777899999999987999999999988999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcC
Q 041518 275 EEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANG 354 (765)
Q Consensus 275 e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G 354 (765)
+.+|++.++++..+++.+.+.++++++||+|++++||++++ |++||||+|||+++++++++.++|+|++++++++++|
T Consensus 241 ~~~p~~~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~--~~~~viEiN~R~~~~~~~~~~~~g~dl~~~~~~~~~G 318 (449)
T 2w70_A 241 EEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFEN--GEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAG 318 (449)
T ss_dssp EEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET--TEEEEEEEECSCCTTHHHHHHHHCCCHHHHHHHHHHT
T ss_pred eeCCcccCCHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEC--CCEEEEEEECCCCccchHHHHHhCCCHHHHHHHHHCC
Confidence 99999779999999999999999999999999999999995 7899999999999888999999999999999999999
Q ss_pred CCCCCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe---
Q 041518 355 EPLPLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA--- 431 (765)
Q Consensus 355 ~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g--- 431 (765)
.++++.+.++.+.|+++++++|+++| .+|.|.+|++..+.+|. .++ +|++.++.+|+.+++++++++|+++++|
T Consensus 319 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~~~~~-~~~-v~~~~~~~~g~~~~~~~~~~~~~v~~~g~~~ 395 (449)
T 2w70_A 319 QPLSIKQEEVHVRGHAVECRINAEDP-NTFLPSPGKITRFHAPG-GFG-VRWESHIYAGYTVPPYYDSMIGKLICYGENR 395 (449)
T ss_dssp CCCSSCGGGCCCCSEEEEEEEECBCT-TTCCBCCEECCEEECCC-STT-EEEECCCCTTCEECSSSCSEEEEEEEEESSH
T ss_pred CCCCCchhccccceeEEEEeecccCc-cccCCCCCEeceEECCC-CCc-EEEEeccccCCEeccccCcceEEEEEEcCCH
Confidence 99876555567789999999999999 88999999999999886 678 9999999999999999999999999999
Q ss_pred ------------e-EEeccccCHHHHHHHhcCcCcccCcccccccccccc
Q 041518 432 ------------K-TVAGVPTNINFLQKLAKHRAFESGDVETHFIEQHKD 468 (765)
Q Consensus 432 ------------~-~i~g~~tn~~~l~~~~~~~~~~~~~~~t~~~~~~~~ 468 (765)
+ .+.|+.|||+||+++++||+|++|+++|+||++++.
T Consensus 396 ~~a~~~~~~~~~~i~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (449)
T 2w70_A 396 DVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLG 445 (449)
T ss_dssp HHHHHHHHHHHHHCEEESSCCSHHHHHHHHTCHHHHHCCCCTTHHHHHHT
T ss_pred HHHHHHHHHHHhhcEEeCcCCCHHHHHHHHcChhhccCCceehhhhhhhh
Confidence 4 899999999999999999999999999999998754
No 14
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=100.00 E-value=9.9e-49 Score=437.05 Aligned_cols=367 Identities=17% Similarity=0.199 Sum_probs=303.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
+++||||+|+|+++++++++|+++|+++++++. ++.++++.+++|+.+.++ |.|.+.++++++++++|+|+|
T Consensus 6 ~~~~ilI~g~g~~~~~~~~a~~~~G~~~v~v~~-~~~~~~~~~~ad~~~~~~-------~~d~~~l~~~~~~~~~d~v~~ 77 (403)
T 4dim_A 6 DNKRLLILGAGRGQLGLYKAAKELGIHTIAGTM-PNAHKPCLNLADEISYMD-------ISNPDEVEQKVKDLNLDGAAT 77 (403)
T ss_dssp CCCEEEEECCCGGGHHHHHHHHHHTCEEEEEEC-SSCCHHHHHHCSEEEECC-------TTCHHHHHHHTTTSCCSEEEC
T ss_pred CCCEEEEECCcHhHHHHHHHHHHCCCEEEEEcC-CCCCCcchhhCCeEEEec-------CCCHHHHHHHHHHcCCCEEEe
Confidence 368999999999999999999999999999954 455678899999998763 578999999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeec
Q 041518 116 GYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPT 195 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~ 195 (765)
+ ++..+...+++++++.|++ ||+++++..++||..+|++++++|||+|++.... +.+++.++++++|||+||||.
T Consensus 78 ~-~~~~~~~~~a~~~~~~gl~--g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~--~~~~~~~~~~~~g~P~vvKp~ 152 (403)
T 4dim_A 78 C-CLDTGIVSLARICDKENLV--GLNEEAAIMCGDKYKMKEAFKKYNVNTARHFVVR--NENELKNALENLKLPVIVKAT 152 (403)
T ss_dssp C-SCSTTHHHHHHHHHHHTCS--SCCHHHHHHHHCHHHHHHHHHHHTCCCCCEECCC--SHHHHHHHHHTSCSSEEEECS
T ss_pred C-CcchhHHHHHHHHHHcCcC--CCCHHHHHHHhCHHHHHHHHHHcCCCCCCEEEeC--CHHHHHHHHhcCCCCEEEEEC
Confidence 7 5666777889999999984 8999999999999999999999999999997654 899999999999999999999
Q ss_pred CCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeecc-cc-ccceee
Q 041518 196 HGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCS-VQ-RRHQKI 273 (765)
Q Consensus 196 ~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s-~~-~~~~k~ 273 (765)
.|+||+||+++++.+|+.++++.+...+ .++.+++|+||+ |.|+++.++.. +|++..+...+.. .. .+....
T Consensus 153 ~g~gg~Gv~~v~~~~el~~~~~~~~~~~----~~~~~lvEe~i~-g~e~sv~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 226 (403)
T 4dim_A 153 DLQGSKGIYIAKKEEEAIDGFNETMNLT----KRDYCIVEEFIE-GYEFGAQAFVY-KNDVLFVMPHGDETYMSHTAVPV 226 (403)
T ss_dssp CC-----CEEESSHHHHHHHHHHHHHHC----SSSCCEEEECCC-SEEEEEEEEEE-TTEEEEEEEEEEEEEESSSEEEE
T ss_pred CCCCCCCEEEECCHHHHHHHHHHHHhcC----cCCcEEEEEccC-CcEEEEEEEEE-CCEEEEEEEecceeccCCCCcce
Confidence 9999999999999999999999887652 247899999999 48999999974 4566554322111 11 111222
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCc-eeEEEEEEECCCCcEEEEEecccCCccc--cccceecCCCHHHHHHH
Q 041518 274 IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHN-AGTVEFIVDTVSDQFYFMEMNTRLQVEH--PVTEMIVDQDLVEWQIR 350 (765)
Q Consensus 274 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G-~~~vEf~~~~~~g~~~~iEiN~R~~~~~--~~~e~~tGvDl~~~~i~ 350 (765)
....|+ .++++..++|.+.+.++++++||+| ++|+||+++ +|++||||||||+++++ .+++..+|+|+++++++
T Consensus 227 ~~~~p~-~l~~~~~~~l~~~a~~~~~~lg~~gg~~~ve~~~~--~~~~~~iEiN~R~~~~~~~~~~~~~~G~d~~~~~~~ 303 (403)
T 4dim_A 227 GHYVPL-DVKDDIIEKTKTEVKKAIKALGLNNCAVNVDMILK--DNEVYIIELTGRVGANCLPELVEINYGIEYYKMIAS 303 (403)
T ss_dssp EEEESC-CSCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEE--TTEEEEEEEESSCCSTTHHHHHHHHHTSCHHHHHHH
T ss_pred eEEeCC-CCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEEEE--CCcEEEEEEcCCCCCCcHHHHHHHHhCcCHHHHHHH
Confidence 344687 5999999999999999999999996 999999998 68899999999999765 46788999999999999
Q ss_pred HHcCCCC-CCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCC-CCCcEEEEecccCCCeeCCccCC--cceE
Q 041518 351 VANGEPL-PLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPV-SSKAVRVETGVEQGDTVSMHYDP--MIAN 426 (765)
Q Consensus 351 ~a~G~~l-~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~-~~~~vrv~~~v~~G~~v~~~~d~--~~~~ 426 (765)
+++|+++ ++.+.+....++ +++|++. |.|.+|+|+.+..|.. .++..+++..+++|+.|+++||| ++|+
T Consensus 304 ~~~G~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~G~i~~~~~~~~~~~~v~~~~~~~~~G~~v~~~~d~~~~~g~ 376 (403)
T 4dim_A 304 MAISENPLVFWSQKSKENKA-GLARMII------ETEKSGILKEILNSNAKDDDIVEITFFKEENDEIKKFENSNDCIGQ 376 (403)
T ss_dssp HHTTCCTHHHHTTCCSSCCE-EEEEEEC------CSSCCEEEEEEEECCCCCTTEEEEEECCCTTCEECCSCSGGGCCEE
T ss_pred HHcCCCcccccccccccccc-ceEEEEE------ecCCCeEEEeeecccccCCCeEEEEEEcCCCCEeCCCCCCCceeEE
Confidence 9999998 444443333444 5688863 6788999999998862 23434578999999999999999 9999
Q ss_pred EEEEe
Q 041518 427 LWYGA 431 (765)
Q Consensus 427 ~i~~g 431 (765)
+|++|
T Consensus 377 vi~~~ 381 (403)
T 4dim_A 377 IIVKE 381 (403)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99998
No 15
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=100.00 E-value=6.7e-45 Score=409.19 Aligned_cols=371 Identities=14% Similarity=0.179 Sum_probs=293.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHH----HHHHHHHHhCCC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGS----SIVDAAIRTGAQ 111 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~----~Il~~a~~~~~D 111 (765)
..|+|+|+|+|.....++++|+++|+++++++++++..+.+...+|+.+.++. |.|.+ .+.+++++.++|
T Consensus 4 ~~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~~~~~~~~~~d~~~~~~~------~~d~~~~~~~~~~~~~~~~id 77 (425)
T 3vot_A 4 RNKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPLPL------FEDEEAAMDVVRQTFVEFPFD 77 (425)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETTSCCCCSCTTEEEEEEECT------TTCHHHHHHHHHHHHHHSCCS
T ss_pred CCcEEEEECCChhHHHHHHHHHHCCCEEEEEECCCcccccCHhhccEEEecCC------CCCHHHHHHHHHHhhhhcCCC
Confidence 36899999999888899999999999999999999888888899999988754 44544 455566778999
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEE
Q 041518 112 AIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPIL 191 (765)
Q Consensus 112 aV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvV 191 (765)
+|+++.++.. ...+.+++.+|++ ||+++++++++||..||++|+++|||+|++.... +.+++.+ .++|||+|
T Consensus 78 ~V~~~~e~~~--~~~a~l~e~lglp--g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~--~~~~~~~--~~~g~P~v 149 (425)
T 3vot_A 78 GVMTLFEPAL--PFTAKAAEALNLP--GLPFTTMENCRNKNKTRSILQQNGLNTPVFHEFH--TLADLEN--RKLSYPLV 149 (425)
T ss_dssp EEECCCGGGH--HHHHHHHHHTTCS--SCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEES--SGGGGTT--CCCCSSEE
T ss_pred EEEECCchhH--HHHHHHHHHcCCC--CCCHHHHHHhhCHHHHHHHHHHCCCCCCceeccC--cHHHHHH--hhcCCcEE
Confidence 9998764332 4456778889987 8999999999999999999999999999987655 7776643 47899999
Q ss_pred EeecCCCCCccEEEECChhHHHHHHHHHHHHHHh-----cCCCCcEEEecccCCCeeEEEEEEEec-cccEEEEEeeecc
Q 041518 192 IKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAA-----SFGINTILLEKYITQPRHIEVQIFGDK-YGKVLHLYERDCS 265 (765)
Q Consensus 192 VKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~-----~fg~~~vlVEeyI~ggrei~v~v~~d~-~g~vv~l~~r~~s 265 (765)
|||..|+||+||++|+|.+|+.++++.+...... ..++..+++|+||+ |+|++++++.++ +..++.+.++.+.
T Consensus 150 vKp~~g~gs~Gv~~v~~~~el~~a~~~~~~~~~~~~~~~~~~~~~~lvEe~i~-G~e~sv~~~~~~g~~~~~~~~~~~~~ 228 (425)
T 3vot_A 150 VKPVNGFSSQGVVRVDDRKELEEAVRKVEAVNQRDLNRFVHGKTGIVAEQFID-GPEFAIETLSIQGNVHVLSIGYKGNS 228 (425)
T ss_dssp EEESCC-----CEEECSHHHHHHHHHHHHHHTTSSHHHHHTTCCCEEEEECCC-SCEEEEEEEEETTEEEEEEEEEEECC
T ss_pred EEECCCCCCCCceEechHHHHHHHHHHHHhhhhhhhhhhccCCCcEEEEEEec-CcEEEEEEEEeCCcEEEEeEEEEecc
Confidence 9999999999999999999999999988654321 12457899999999 589999999753 2234445667777
Q ss_pred ccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCC-ceeEEEEEEECCCCcEEEEEecccCCcc---ccccceecC
Q 041518 266 VQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYH-NAGTVEFIVDTVSDQFYFMEMNTRLQVE---HPVTEMIVD 341 (765)
Q Consensus 266 ~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~-G~~~vEf~~~~~~g~~~~iEiN~R~~~~---~~~~e~~tG 341 (765)
....+.+.....|+ .++++..+++.+.+.++++++|+. |++|+||++++ +|++||||+|||+++. +.+++.++|
T Consensus 229 ~~~~~~~~~~~~Pa-~l~~~~~~~i~~~~~~~~~alg~~~G~~~ve~~~~~-dG~~~~iEiN~R~gG~~~~~~l~~~~~G 306 (425)
T 3vot_A 229 KGPFFEEGVYIAPA-QLKEETRLAIVKEVTGAVSALGIHQGPAHTELRLDK-DGTPYVIEVGARIGGSGVSHYIVKESTG 306 (425)
T ss_dssp CCSBCCCCEEEESC-CCCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEECT-TCCEEEEEEESSCGGGGHHHHHHHHHHC
T ss_pred CCCccccceEeecc-cCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEEEEe-CCcEEEEEEecCCCCCCchHHHHHHHHC
Confidence 77777777788899 699999999999999999999997 99999999997 8899999999999743 357888999
Q ss_pred CCHHHHHHHHHcCCCCCCCCC-CcccceEEEEEEecccCCCCCCCCCCcceeEEeeCC---CCCCcEEEEecccCCCeeC
Q 041518 342 QDLVEWQIRVANGEPLPLSQS-EVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVP---VSSKAVRVETGVEQGDTVS 417 (765)
Q Consensus 342 vDl~~~~i~~a~G~~l~~~~~-~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~---~~~~~vrv~~~v~~G~~v~ 417 (765)
+|+++++++.++|.+...... ......++....+. .|.+|++..+.... ..|++.++...+++|+.|.
T Consensus 307 ~d~~~~~i~~alg~~~~~~~~~~~~~~~~~~~~~~~--------~~~~G~~~~i~g~~~~~~~p~v~~~~~~~~~G~~v~ 378 (425)
T 3vot_A 307 INFMQLVLQNALKPLESSEFEGEIRPVRTAGNYIIP--------VQGSGTFEKIDGLEEVKQRQEVKRVFQFMRRGAKIL 378 (425)
T ss_dssp CCHHHHHHHHHHSCCCGGGSCSCCCCSSEEEEEECC--------CCSCEEEEEEETHHHHHTCTTEEEEEECCCTTCEEC
T ss_pred CCHHHHHHHHHCCCccccccccccccceEEEEEEEc--------CCCCeEEEecCCHHHHhcCCCeEEEEEEecCCCEeC
Confidence 999999999999976542211 22233444433332 24579998876432 1467348999999999998
Q ss_pred CccC--CcceEEEEEe
Q 041518 418 MHYD--PMIANLWYGA 431 (765)
Q Consensus 418 ~~~d--~~~~~~i~~g 431 (765)
++.| +++|+++++|
T Consensus 379 ~~~~~~~~~g~v~~~g 394 (425)
T 3vot_A 379 PYPHFSGYPGFILTSH 394 (425)
T ss_dssp CTTCCCCCSEEEEEEE
T ss_pred CCCCCCCeEEEEEEEE
Confidence 7654 4899999998
No 16
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=6.7e-44 Score=441.27 Aligned_cols=386 Identities=17% Similarity=0.253 Sum_probs=321.8
Q ss_pred cCCCCEEEEEcCcHH-----------HHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHH
Q 041518 34 QQRIEKILIANRGEI-----------AYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIV 102 (765)
Q Consensus 34 ~~~~kkILI~g~G~~-----------a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il 102 (765)
..++|||||+|+|++ +.+++++|+++|+++++++++++....+..++|+.+ +.+ .+.+.|.
T Consensus 4 ~~~~~kIlIig~G~i~ig~a~E~d~sg~~~~~al~~~G~~vv~v~~~~~~~~~~~~~ad~~~-i~p-------~~~e~i~ 75 (1073)
T 1a9x_A 4 RTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATY-IEP-------IHWEVVR 75 (1073)
T ss_dssp CSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEE-CSC-------CCHHHHH
T ss_pred CCCCCEEEEECCCcccccccccccchHHHHHHHHHHcCCEEEEEeCCcccccCChhhCcEEE-ECC-------CCHHHHH
Confidence 346899999999986 678999999999999999988887778889999977 554 5789999
Q ss_pred HHHHHhCCCEEEeCCCc-ccccH--HHHH--HHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHH
Q 041518 103 DAAIRTGAQAIHPGYGF-LSESA--DFAQ--LCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDID 177 (765)
Q Consensus 103 ~~a~~~~~DaV~pg~g~-lsE~~--~~a~--~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~ 177 (765)
++++++++|+|+|++++ ..++. .+++ .+++.|++++||+++++..+.||..+|++|+++|+|+|++.... +.+
T Consensus 76 ~i~~~~~~D~V~p~~g~~~~l~~~~~l~~~~~le~~gv~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~~~v~--~~~ 153 (1073)
T 1a9x_A 76 KIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAH--TME 153 (1073)
T ss_dssp HHHHHHCCSEEECSSSHHHHHHHHHHHHHTTHHHHHTCEECSSCHHHHHHHHSHHHHHHHHHHTTCCCCSEEEES--SHH
T ss_pred HHHHHhCCCEEEeccCCchHHHHHHHHHHhhHHHHcCCeeeCCCHHHHHHhhCHHHHHHHHHHCCcCCCCEEEEC--CHH
Confidence 99999999999999875 12221 2333 67899999999999999999999999999999999999998655 899
Q ss_pred HHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEE
Q 041518 178 LMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVL 257 (765)
Q Consensus 178 e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv 257 (765)
++.++++++|||+||||..|+||+|+++++|.+|+.++++.+...+ ..+.+|||+||+|.+|++++++.|.+|+++
T Consensus 154 ea~~~~~~ig~PvVvKp~~~~Gg~Gv~iv~~~eel~~~~~~~~~~~----~~~~vlvEe~I~G~~E~~v~v~~d~~g~~v 229 (1073)
T 1a9x_A 154 EALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLS----PTKELLIDESLIGWKEYEMEVVRDKNDNCI 229 (1073)
T ss_dssp HHHHHHHHHCSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHHC----TTSCEEEEECCTTSEEEEEEEEECTTCCEE
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCceEEeCCHHHHHHHHHHHHhhC----CCCcEEEEEccCCCeEEEEEEEEeCCCCEE
Confidence 9999999999999999999999999999999999999998876542 246899999999879999999999989988
Q ss_pred EEEeeec--cccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCC-ceeEEEEEEECCCCcEEEEEecccCCcccc
Q 041518 258 HLYERDC--SVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYH-NAGTVEFIVDTVSDQFYFMEMNTRLQVEHP 334 (765)
Q Consensus 258 ~l~~r~~--s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~-G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~ 334 (765)
.+...+. +..-..+..++.+|++.++++..++|.+.+.++++++||+ |.+++||++++++|++||||||||++++++
T Consensus 230 ~~~~~e~~dp~~v~~g~s~~~~Pa~~l~~~~~~~l~~~a~~i~~~lg~~~G~~~vdf~~~~~~g~~~viEiNpR~~~ss~ 309 (1073)
T 1a9x_A 230 IVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSA 309 (1073)
T ss_dssp EEEEEEESSCTTSCGGGSCEEESCCSCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEECTTTCCEEEEEEESSCCHHHH
T ss_pred EEEEEecccCCccccCcEEEEecCCCCCHHHHHHHHHHHHHHHHHcCcccCceEEEEEEECCCCCEEEEEecCCCCccHH
Confidence 7743221 0001224566778997799999999999999999999999 999999999975688999999999998899
Q ss_pred ccceecCCCHHHHHHHHHcCCCCCCCCCCcccceEEEEEEeccc-CCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCC
Q 041518 335 VTEMIVDQDLVEWQIRVANGEPLPLSQSEVPLLGHAFEARIYAE-NVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQG 413 (765)
Q Consensus 335 ~~e~~tGvDl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae-~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G 413 (765)
+++.++|+|+.++++++++|.+++..+. +++.+ +|. .|.|..|.+. +..|. ..++.....+
T Consensus 310 l~~~atG~~l~~~~~~~a~G~~l~~~~~-----------~i~~~~~~a-~f~p~~~~v~-~~ip~-----~~~~~~~~~~ 371 (1073)
T 1a9x_A 310 LASKATGFPIAKVAAKLAVGYTLDELMN-----------DITGGRTPA-SFEPSIDYVV-TKIPR-----FNFEKFAGAN 371 (1073)
T ss_dssp HHHHHHSCCHHHHHHHHHTTCCGGGSBC-----------TTTTTCSBS-CSCCBCSSEE-EEEEE-----CCGGGCTTSC
T ss_pred HHHHHhCCCHHHHHHHHHcCCChHHhhc-----------cccCccCHH-HcccCCCcEE-EEccc-----ccccccCCCC
Confidence 9999999999999999999999874332 23444 554 6889888773 45554 2344445567
Q ss_pred CeeCCccCCcceEEEEEe--------------e-EEeccccC--------HHHHHHHhcCcC
Q 041518 414 DTVSMHYDPMIANLWYGA--------------K-TVAGVPTN--------INFLQKLAKHRA 452 (765)
Q Consensus 414 ~~v~~~~d~~~~~~i~~g--------------~-~i~g~~tn--------~~~l~~~~~~~~ 452 (765)
.++...+++ +|+++++| + .+.|+.+| .++|.+.|.+|.
T Consensus 372 ~~~~~~~~~-~G~v~~~g~~~~ea~~ka~~~l~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 432 (1073)
T 1a9x_A 372 DRLTTQMKS-VGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAG 432 (1073)
T ss_dssp CBCCSSCCC-CEEEEEEESSHHHHHHHHHHHSSSSCSSSCCSSCTTCTTHHHHHHHHHHTCB
T ss_pred cccCCCccC-cEEEEEEcCCHHHHHHHHHHhhcccccCcCccccccccccHHHHHHHHhCCC
Confidence 788888887 89999999 5 78888744 688998999988
No 17
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=100.00 E-value=1.5e-42 Score=385.29 Aligned_cols=359 Identities=18% Similarity=0.195 Sum_probs=284.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
+++||||+|+|+.+.+++++++++|+++++++.+++. ++.+++|+.+.++ |.|.+.++++++++++|+|+|
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~~~--~~~~~~d~~~~~~-------~~d~~~l~~~~~~~~~d~v~~ 80 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADA--PAMHVAHRSHVIN-------MLDGDALRRVVELEKPHYIVP 80 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTC--GGGGGSSEEEECC-------TTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCCCC--chhhhccceEECC-------CCCHHHHHHHHHHcCCCEEEE
Confidence 5689999999999999999999999999999876554 6778899988653 578899999999999999999
Q ss_pred CCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHH-HHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEee
Q 041518 116 GYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIM-GAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKP 194 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l-~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP 194 (765)
++++.. ..+++.+++.|+ ++||+++++++++||..+|+++ +++|||+|++.... +.+++.++++++|||+||||
T Consensus 81 ~~e~~~--~~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~~~~l~~~~gip~p~~~~~~--~~~~~~~~~~~~g~P~vvKp 155 (391)
T 1kjq_A 81 EIEAIA--TDMLIQLEEEGL-NVVPCARATKLTMNREGIRRLAAEELQLPTSTYRFAD--SESLFREAVADIGYPCIVKP 155 (391)
T ss_dssp CSSCSC--HHHHHHHHHTTC-EESSCHHHHHHHHSHHHHHHHHHTTSCCCBCCEEEES--SHHHHHHHHHHHCSSEEEEE
T ss_pred CCCcCC--HHHHHHHHhCCC-CcCCCHHHHHHhhCHHHHHHHHHHhCCCCCCCeeeeC--CHHHHHHHHHhcCCCEEEEe
Confidence 987765 346677899999 6799999999999999999999 89999999987655 88999999999999999999
Q ss_pred cCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeee
Q 041518 195 THGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKII 274 (765)
Q Consensus 195 ~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~ 274 (765)
..|+||+|++++++.+|+.++++.+...+.. .+..+++|+||++++|+++.++.+++| ...+...+. ....+....
T Consensus 156 ~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~g-~~~~~~~~~-~~~~~~~~~ 231 (391)
T 1kjq_A 156 VMSSSGKGQTFIRSAEQLAQAWKYAQQGGRA--GAGRVIVEGVVKFDFEITLLTVSAVDG-VHFCAPVGH-RQEDGDYRE 231 (391)
T ss_dssp SCC---CCCEEECSGGGHHHHHHHHHHHSGG--GCCCEEEEECCCCSEEEEEEEEEETTE-EEECCCEEE-EEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEEecCCCeEEEEEEEEeCCC-eEEccCcce-EEECCEEEE
Confidence 9999999999999999999999888754321 257899999999779999999988665 222111010 001111112
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcC
Q 041518 275 EEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANG 354 (765)
Q Consensus 275 e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G 354 (765)
...|+ .++++..+++.+++.++++++||+|++++||++++ + ++||||+|||+++....+...+|+|++++++++++|
T Consensus 232 ~~~p~-~l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~-~-~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~G 308 (391)
T 1kjq_A 232 SWQPQ-QMSPLALERAQEIARKVVLALGGYGLFGVELFVCG-D-EVIFSEVSPRPHDTGMVTLISQDLSEFALHVRAFLG 308 (391)
T ss_dssp EEECC-CCCHHHHHHHHHHHHHHHHHHCSSEEEEEEEEEET-T-EEEEEEEESSCCGGGGGHHHHBSSCHHHHHHHHHTT
T ss_pred EEeCC-CCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeC-C-cEEEEEEECCCCCCcceeeeecCcCHHHHHHHHHcC
Confidence 23587 48999999999999999999999999999999996 4 899999999999665555555699999999999999
Q ss_pred CCCCCCCCCcccceEEEEEEecccCCCCCCCCC-CcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe
Q 041518 355 EPLPLSQSEVPLLGHAFEARIYAENVPKGFLPA-TGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA 431 (765)
Q Consensus 355 ~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~-~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g 431 (765)
.+++ ++.+.++++.+++++++|.. .|. .|....++ | | +++....+++ ..++.++|+++++|
T Consensus 309 ~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-p----g-~~v~~~~~~~----~~~~~~lg~v~~~g 370 (391)
T 1kjq_A 309 LPVG----GIRQYGPAASAVILPQLTSQ--NVTFDNVQNAVG-A----D-LQIRLFGKPE----IDGSRRLGVALATA 370 (391)
T ss_dssp CCCC----CCCBCSSEEEEEECCEEEES--SCEEECGGGSCB-T----T-EEEEECCCCC----EEEECCCEEEEEEC
T ss_pred CCCC----CccccCcEEEEEEEccCccc--ccccccHHHHhC-C----C-CEEEEeccCC----CCCCCeEEEEEEec
Confidence 9876 24467788899999987632 222 23333333 4 3 4444333333 45778999999987
No 18
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=100.00 E-value=2.6e-43 Score=387.98 Aligned_cols=337 Identities=15% Similarity=0.135 Sum_probs=260.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
||||+|+|+|..+..++++||++|++|++++.++ ++++.++||+.+.+++ +.+.+.+++++ .++|+|+|+
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~--~~~~~~~aD~~~~~~~------~~d~~~~~~~~--~~~D~v~~~ 70 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP--QALIRNYADEFYCFDV------IKEPEKLLELS--KRVDAVLPV 70 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT--TCTTTTTSSEEEECCT------TTCHHHHHHHH--TSSSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC--CChhHhhCCEEEECCC------CcCHHHHHHHh--cCCCEEEEC
Confidence 7999999999999999999999999999997654 5578889999998765 45677777665 579999999
Q ss_pred CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecC
Q 041518 117 YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTH 196 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~ 196 (765)
+++..++..++.++++.+++ +||+++++++++||..+|++|+++|+|+|++. .+|||+||||+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~-~g~~~~a~~~~~dK~~~k~~l~~~gip~~~~~---------------~ig~P~vvKp~~ 134 (363)
T 4ffl_A 71 NENLACIEFLNSIKEKFSCP-VLFDFEAYRISRDKKKSKDYFKSIGVPTPQDR---------------PSKPPYFVKPPC 134 (363)
T ss_dssp CCCHHHHHHHHHHGGGCSSC-BCCCHHHHHHHTSHHHHHHHHHHTTCCCCCBS---------------CSSSCEEEECSS
T ss_pred CCChhHHHHHHHHHHHCCCc-cCCCHHHHHHhhCHHHHHHHHHhcCCCCCCce---------------ecCCCEEEEECC
Confidence 98877666667777888875 68999999999999999999999999999864 368999999999
Q ss_pred CCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeeeee
Q 041518 197 GGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKIIEE 276 (765)
Q Consensus 197 g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~e~ 276 (765)
|+||+|+++++|.+++.. ....+++|+||+ ++|+++++++|+++.++....+++..+..+++.+..
T Consensus 135 g~g~~gv~~v~~~~~~~~-------------~~~~~~~ee~i~-g~e~sv~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p 200 (363)
T 4ffl_A 135 ESSSVGARIIYDDKDLEG-------------LEPDTLVEEYVE-GEVVSLEVVGDGSHFAVVKETLVHIDETYDCHMVTP 200 (363)
T ss_dssp CCTTTTCEEEC------C-------------CCTTCEEEECCC-SEEEEEEEEEESSCEEECCCEEEEECTTSCEEEEEE
T ss_pred CCCCcCeEEeccHHHhhh-------------hccchhhhhhcc-CcEEEEEEEEECCeEEEEEEEEeccCCcccceeecc
Confidence 999999999999988643 146899999999 689999999998877776677777777776666554
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCcccc-ccceecCCCHHHHHHHHHcCC
Q 041518 277 APAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHP-VTEMIVDQDLVEWQIRVANGE 355 (765)
Q Consensus 277 ~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~-~~e~~tGvDl~~~~i~~a~G~ 355 (765)
.|. . +++.+++.++++++||+|++++||++++ +++||||||||+++.++ +++.++|+|++++++++++|.
T Consensus 201 ~~~---~----~~~~~~a~~~~~~l~~~G~~~vef~~~~--~~~~viEiN~R~~g~~~~~~~~~~g~dl~~~~~~~~~g~ 271 (363)
T 4ffl_A 201 LPA---N----PLFRQISHDLAANLPLKGIMDVEAIFGP--KGLRVIEIDARFPSQTPTVVYYSSGINLIELLFRAFTDG 271 (363)
T ss_dssp CCC---C----HHHHHHHHHHHHTTTCEEEEEEEEEEET--TEEEEEEEECSCCSSHHHHHHHHHCCCHHHHHHHHTTTC
T ss_pred hhH---H----HHHHHHHHHHHHhCCccceeeeeeEEeC--CeEEEEEEeCCCCCChHHHHHHHHCcCHHHHHHHHHCCC
Confidence 444 2 5678899999999999999999999994 56999999999987775 889999999999999999999
Q ss_pred CCCCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe
Q 041518 356 PLPLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA 431 (765)
Q Consensus 356 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g 431 (765)
+++.. ..+..++++..+++++.. ..+.|..+.+.. .+ ++ +.........+...+.+|+++|++|+||
T Consensus 272 ~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~---~~-~~~~~~~~~~~~~~~~~~~~v~~vi~~G 338 (363)
T 4ffl_A 272 VEEIR--AIPENKYCIYEHLMFGEN-GVLIPVGEQVLS--MG---SD-YGKFYEEPGIEIFLCKGEYPVFTMVFWG 338 (363)
T ss_dssp CCCC------CCCEEEEEEEEECGG-GBEEECCHHHHT--TC---SE-EEEEEEETTEEEEEEESSSCEEEEEEEE
T ss_pred CCCcc--ccCCCceEEEEEEecCCC-CccCCCCceEEe--cC---CC-eeEEEecCCCCCEecCCCCceEEEEEEE
Confidence 98753 344456677677766542 224444433321 11 11 2211111111222467899999999999
No 19
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=100.00 E-value=3.5e-42 Score=387.95 Aligned_cols=371 Identities=18% Similarity=0.181 Sum_probs=281.6
Q ss_pred CCCCcCCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhC
Q 041518 30 SDDKQQRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTG 109 (765)
Q Consensus 30 ~~~~~~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~ 109 (765)
.+|...+++||||+|+|+.+.+++++++++|+++++++++++. +...++|+.+.++ |.|.+.+++++++.+
T Consensus 12 ~~~~~~~~~~ili~g~g~~g~~~~~a~~~~G~~v~~v~~~~~~--~~~~~ad~~~~~~-------~~d~~~l~~~~~~~~ 82 (433)
T 2dwc_A 12 GTATTDSAQKILLLGSGELGKEIAIEAQRLGVEVVAVDRYANA--PAMQVAHRSYVGN-------MMDKDFLWSVVEREK 82 (433)
T ss_dssp CCTTSTTCCEEEEESCSHHHHHHHHHHHHTTCEEEEEESSTTC--HHHHHSSEEEESC-------TTCHHHHHHHHHHHC
T ss_pred CCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC--hhhhhcceEEECC-------CCCHHHHHHHHHHcC
Confidence 3333345689999999999999999999999999999876554 6778899988653 578999999999999
Q ss_pred CCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHH-HHCCCCCCCccccCCCCHHHHHHHHHHhCC
Q 041518 110 AQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIM-GAAGVPLVPGYHGNEQDIDLMKSEAAKIGY 188 (765)
Q Consensus 110 ~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l-~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~ 188 (765)
+|+|++++++.. ..+++.+++.|+ ++||+++++.+++||..+|++| +++|||+|++.... +.+++.++++++||
T Consensus 83 ~d~V~~~~e~~~--~~~~~~l~~~gi-~~~~~~~~~~~~~dK~~~k~~l~~~~gip~p~~~~~~--~~~~~~~~~~~~g~ 157 (433)
T 2dwc_A 83 PDAIIPEIEAIN--LDALFEFEKDGY-FVVPNARATWIAMHRERLRETLVKEAKVPTSRYMYAT--TLDELYEACEKIGY 157 (433)
T ss_dssp CSEEEECSSCSC--HHHHHHHHHTTC-CBSSCHHHHHHHHCHHHHHHHHHHTSCCCCCCEEEES--SHHHHHHHHHHHCS
T ss_pred CCEEEECcccCC--HHHHHHHHhcCC-eeCCCHHHHHHhhCHHHHHHHHHHhcCCCCCCeeEeC--CHHHHHHHHHhcCC
Confidence 999999998765 456788899999 6799999999999999999999 89999999987655 88999999999999
Q ss_pred cEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEec--cccEEE-EEe-eec
Q 041518 189 PILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDK--YGKVLH-LYE-RDC 264 (765)
Q Consensus 189 PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~--~g~vv~-l~~-r~~ 264 (765)
|+||||..|+||+|+++++|.+|+.++++.+...+.. .+..+++|+||++++|+++.++.+. +|+.+. +.. .+.
T Consensus 158 P~vvKp~~g~gg~Gv~~v~~~~el~~~~~~~~~~~~~--~~~~~lvEe~i~~g~E~sv~~~~~~~~~G~~~~~~~~~~~~ 235 (433)
T 2dwc_A 158 PCHTKAIMSSSGKGSYFVKGPEDIPKAWEEAKTKARG--SAEKIIVEEHIDFDVEVTELAVRHFDENGEIVTTFPKPVGH 235 (433)
T ss_dssp SEEEEECCC------EEECSGGGHHHHHHC-----------CCEEEEECCCCSEEEEECCEEEECTTSCEEEEEECCEEE
T ss_pred CEEEEECCCcCCCCeEEECCHHHHHHHHHHHHhhccc--CCCCEEEEccCCCCeeEEEEEEecccCCCCEeEEEecccce
Confidence 9999999999999999999999999999877653221 2468999999997799999999875 677422 211 110
Q ss_pred cccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccc--cccceecCC
Q 041518 265 SVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEH--PVTEMIVDQ 342 (765)
Q Consensus 265 s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~--~~~e~~tGv 342 (765)
....+.......|+ .++++..+++.+++.++++++||+|++++||++++ + ++||||+|||+++.. ++....+|+
T Consensus 236 -~~~~~~~~~~~~p~-~l~~~~~~~i~~~a~~~~~~lg~~G~~~ve~~~~~-~-~~~viEiN~R~~~~~~~~~~~~~~g~ 311 (433)
T 2dwc_A 236 -YQIDGDYHASWQPA-EISEKAEREVYRIAKRITDVLGGLGIFGVEMFVKG-D-KVWANEVSPRPHDTGMVTLASHPPGF 311 (433)
T ss_dssp -EESSSSEEEEEESC-CCCHHHHHHHHHHHHHHHHHHCSSEECEEEEEEET-T-EEEEEEEESSCCGGGGGHHHHSCTTC
T ss_pred -EEEcCEEEEEEcCC-CCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeC-C-cEEEEEEeCCcCCCcceehhHhccCC
Confidence 11111222233588 48999999999999999999999999999999996 4 899999999999654 334557799
Q ss_pred CHHHHHHHHHcCCCCCC----CCCCcccceEEEEEEecccCCCCCCCCC-CcceeEEeeCCCCCCcEEEEecccCCCeeC
Q 041518 343 DLVEWQIRVANGEPLPL----SQSEVPLLGHAFEARIYAENVPKGFLPA-TGVLHHYHPVPVSSKAVRVETGVEQGDTVS 417 (765)
Q Consensus 343 Dl~~~~i~~a~G~~l~~----~~~~~~~~g~ai~~ri~ae~p~~~f~p~-~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~ 417 (765)
|++++++++++|.+++. .+.++.+.++++.+++++++|. ..|. .|....+.. |+ +.+....+++
T Consensus 312 ~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~a~~~~v~~~~~~--~~~~i~g~~~~~~~----pg-~~v~~~~~~~---- 380 (433)
T 2dwc_A 312 SEFALHLRAVLGLPIPGEWVDGYRLFPMLIPAATHVIKAKVSG--YSPRFRGLVKALSV----PN-ATVRLFGKPE---- 380 (433)
T ss_dssp SHHHHHHHHHHTCCCCCEEETTEEEECCSSCEEEEEEECSSCE--ESCEEECHHHHTTS----TT-EEEEECCCSE----
T ss_pred CHHHHHHHHHcCCCCCcccccccccccccccEEEEEEEcCCCC--cCcCcchHHHHhhC----CC-cEEEEecCCC----
Confidence 99999999999998762 0123566788989999998753 1222 232222223 34 4444433333
Q ss_pred CccCCcceEEEEEe
Q 041518 418 MHYDPMIANLWYGA 431 (765)
Q Consensus 418 ~~~d~~~~~~i~~g 431 (765)
..++..+|+++++|
T Consensus 381 ~~~~~~lg~v~~~g 394 (433)
T 2dwc_A 381 AYVGRRLGIALAWD 394 (433)
T ss_dssp ECTTCEEEEEEEEC
T ss_pred CCCCCeEEEEEEEe
Confidence 35778899999887
No 20
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=100.00 E-value=7.9e-41 Score=375.01 Aligned_cols=308 Identities=22% Similarity=0.231 Sum_probs=261.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
+.+||||+|+|+++++++++++++|+++++++ ++++++..++||+.+. .+|.|.+.+++++ .++|+|++
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d--~~~~~p~~~~ad~~~~-------~~~~d~~~l~~~a--~~~D~V~~ 102 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLD--PDPASPAGAVADRHLR-------AAYDDEAALAELA--GLCEAVST 102 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC--SCTTCHHHHHSSEEEC-------CCTTCHHHHHHHH--HHCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC--CCCcCchhhhCCEEEE-------CCcCCHHHHHHHH--hcCCEEEE
Confidence 35799999999999999999999999998874 4566789999999874 3578999999999 46999997
Q ss_pred CCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHH----hCCcEE
Q 041518 116 GYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAK----IGYPIL 191 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~----ig~PvV 191 (765)
++. ..+..+++.+++. .++||++++++++.||..+|++|+++|||+|++.... +.+++.+++++ + ||+|
T Consensus 103 ~~e--~~~~~~~~~l~~~--~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~v~--~~~e~~~~~~~~~~~~-~P~V 175 (419)
T 4e4t_A 103 EFE--NVPAASLDFLART--TFVAPAGRCVAVAQDRIAEKRFIEASGVPVAPHVVIE--SAAALAALDDAALDAV-LPGI 175 (419)
T ss_dssp CCT--TCCHHHHHHHHTT--SEESSCHHHHHHHTCHHHHHHHHHHTTCCBCCEEEEC--SHHHHHTSCHHHHHTT-CSEE
T ss_pred ccC--cCCHHHHHHHHcc--CCcCCCHHHHHHhcCHHHHHHHHHHcCcCCCCeEEEC--CHHHHHHHHHhhcccc-CCEE
Confidence 653 4446777888887 4789999999999999999999999999999998655 88999888888 9 9999
Q ss_pred Eeec-CCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccc
Q 041518 192 IKPT-HGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRH 270 (765)
Q Consensus 192 VKP~-~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~ 270 (765)
|||. .|++|+|+++++|.+|+.++++.+ ++..+|+|+||++++|+++.++.|.+|+++.+.. .++.+
T Consensus 176 vKp~~~g~~G~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~Eisv~v~~~~~G~~~~~~~----~e~~~ 243 (419)
T 4e4t_A 176 LKTARLGYDGKGQVRVSTAREARDAHAAL--------GGVPCVLEKRLPLKYEVSALIARGADGRSAAFPL----AQNVH 243 (419)
T ss_dssp EEESSSCCTTTTEEEECSHHHHHHHHHHT--------TTCCEEEEECCCEEEEEEEEEEECTTSCEEECCC----EEEEE
T ss_pred EEecCCCCCCCceEEECCHHHHHHHHHhc--------CCCcEEEeecCCCCeEEEEEEEEcCCCCEEEEeC----eEEEe
Confidence 9999 889999999999999999988654 3579999999998899999999998888776532 12222
Q ss_pred e-ee--eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHH
Q 041518 271 Q-KI--IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEW 347 (765)
Q Consensus 271 ~-k~--~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~ 347 (765)
+ .. ....|++.++++..+++.+++.++++++||+|++++||++++ +|++||+|||||++++++++...+|+|++++
T Consensus 244 ~~g~~~~~~~Pa~~l~~~~~~~~~~~a~~i~~~lg~~G~~~vE~~~~~-dG~~~v~EiNpR~~~sg~~t~~~~~~s~~~~ 322 (419)
T 4e4t_A 244 HNGILALTIVPAPAADTARVEEAQQAAVRIADTLGYVGVLCVEFFVLE-DGSFVANEMAPRPHNSGHYTVDACATSQFEQ 322 (419)
T ss_dssp ETTEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TCCEEEEEEESSCCGGGTTHHHHBSSCHHHH
T ss_pred eCCeEEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEeC-CCCEEEEEEeCCCCCCCCeEeeccCCCHHHH
Confidence 2 12 235688569999999999999999999999999999999997 7889999999999988899999999999999
Q ss_pred HHHHHcCCCCCCCCCCcccceEEEEEEeccc
Q 041518 348 QIRVANGEPLPLSQSEVPLLGHAFEARIYAE 378 (765)
Q Consensus 348 ~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae 378 (765)
+++.++|.|++. +.....++...++.+
T Consensus 323 ~~ra~~G~pl~~----~~~~~~~~m~n~lg~ 349 (419)
T 4e4t_A 323 QVRAMTRMPLGN----PRQHSPAAMLNILGD 349 (419)
T ss_dssp HHHHHTTCCCCC----CCBCSCEEEEEEEGG
T ss_pred HHHHHcCCCCCC----ccccCCeEEEEEecC
Confidence 999999999873 222334667777765
No 21
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-40 Score=367.87 Aligned_cols=342 Identities=17% Similarity=0.221 Sum_probs=275.1
Q ss_pred EEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCCC
Q 041518 39 KILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYG 118 (765)
Q Consensus 39 kILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~g 118 (765)
||||+|+|..+.+++++++++|+++++++.++ ..+...++|. +.. +|.|.+.+++++ .++|+|+|+++
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G~~v~~~~~~~--~~~~~~~a~~-~~~-------~~~d~~~l~~~~--~~~d~v~~~~e 68 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLGLSFRFLDPSP--EACAGQVGEL-VVG-------EFLDEGALLRFA--EGLALVTYEFE 68 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBTCCEEEEESCT--TCGGGGTSEE-EEC-------CTTCHHHHHHHH--TTCSEEEECCT
T ss_pred CEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC--CChHHHhhce-Eec-------CCCCHHHHHHHH--hCCCEEEECCC
Confidence 69999999999999999999999999887654 3456778888 533 568999999999 78999999987
Q ss_pred cccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecCCC
Q 041518 119 FLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTHGG 198 (765)
Q Consensus 119 ~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~g~ 198 (765)
+.. ..+++.+++.| ++||+++++.+++||..+|++|+++|||+|++.... +.+++.++++++|||+|+||..|+
T Consensus 69 ~~~--~~~~~~l~~~g--~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~--~~~~~~~~~~~~g~P~vvKp~~~~ 142 (369)
T 3aw8_A 69 NVP--VEAARRLEGRL--PLYPPAKALEVAQDRLREKTFFQGLGVPTPPFHPVD--GPEDLEEGLKRVGLPALLKTRRGG 142 (369)
T ss_dssp TCC--HHHHHHHHHHS--CBSSCHHHHHHHTCHHHHHHHHHHHTCCCCCEEEES--SHHHHHHHHTTTCSSEEEEECCC-
T ss_pred CcC--HHHHHHHHHcC--CcCCCHHHHHHhcCHHHHHHHHHHCCCCCCCceeeC--CHHHHHHHHHHcCCCEEEEEcCCC
Confidence 643 67778888888 689999999999999999999999999999987655 889999999999999999999999
Q ss_pred -CCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeeeeec
Q 041518 199 -GGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKIIEEA 277 (765)
Q Consensus 199 -Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~e~~ 277 (765)
||+||++++|.+|+.++++.+ ++..+++|+||++++|++++++.|++|+++.+. ..+..++.+.......
T Consensus 143 ~~g~Gv~~v~~~~el~~~~~~~--------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~~-~~~~~~~~~~~~~~~~ 213 (369)
T 3aw8_A 143 YDGKGQALVRTEEEALEALKAL--------GGRGLILEGFVPFDREVSLLAVRGRTGEVAFYP-LVENRHWGGILRLSLA 213 (369)
T ss_dssp -----EEEECSHHHHHHHHTTT--------CSSSEEEEECCCCSEEEEEEEEECTTSCEEECC-CEEEEEETTEEEEEEE
T ss_pred CCcceEEEECCHHHHHHHHHhc--------CCCcEEEEEcCCCCEEEEEEEEECCCCCEEEEC-CeeeeeeCCEEEEEEC
Confidence 999999999999999888654 257999999999779999999999888876543 2223444455555678
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcCCCC
Q 041518 278 PAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANGEPL 357 (765)
Q Consensus 278 Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G~~l 357 (765)
|++.++++..+++.+++.++++++||+|++++||++++ |++||||+|||+++++..+...+|+|+++.+++.++|.++
T Consensus 214 p~~~l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~--~~~~viEiN~R~~~~~~~~~~~~g~~~~~~~~~~~~g~~l 291 (369)
T 3aw8_A 214 PAPGASEALQKKAEAYALRAMEALDYVGVLALEFFQVG--EELLFNEMAPRVHNSGHWTIEGAETSQFENHLRAVLGLPL 291 (369)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET--TEEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHTCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEEC--CcEEEEEEeCCcCCccceeeeeecCCHHHHHHHHHcCCCC
Confidence 98669999999999999999999999999999999995 7799999999999877777788999999999999999998
Q ss_pred CCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe
Q 041518 358 PLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA 431 (765)
Q Consensus 358 ~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g 431 (765)
+. +...++++.+++++++| + +..+. . .|+ +.+.. . |..+++ ...+|+++++|
T Consensus 292 ~~----~~~~~~~~~~~~~~~~~--------~-~~~~~--~-~p~-~~~~~--~-g~~~~~--~~~lg~v~~~g 343 (369)
T 3aw8_A 292 GS----TAPRGQSAMVNLIGEKP--------P-FAEVL--K-VEG-AHLHW--Y-GKAVRP--GRKVGHITLRR 343 (369)
T ss_dssp CC----CCBCSEEEEEEEESCCC--------C-HHHHH--T-STT-EEEEE--C-CCCCCT--TCEEEEEEEEE
T ss_pred CC----ccccccEEEEEEeCCCc--------h-HHHhc--c-CCC-cEEEE--e-cCCCCC--CCeEEEEEEEc
Confidence 73 22346788999998762 1 11111 1 234 43322 2 333322 36799999998
No 22
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=100.00 E-value=1.1e-40 Score=372.36 Aligned_cols=314 Identities=17% Similarity=0.194 Sum_probs=265.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc--EEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSAD--EAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD--~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
++||||+|+|+.+++++++|+++|+++++++ + .+++..+++| ..+. .+|.|.+.+.+++++ +|+|.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~--~~~p~~~~ad~~~~~~-------~~~~d~~~l~~~a~~--~d~i~ 91 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD-A--DNSPAKQISAHDGHVT-------GSFKEREAVRQLAKT--CDVVT 91 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-S--TTCTTGGGCCSSCCEE-------SCTTCHHHHHHHHTT--CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-C--CCCcHHHhccccceee-------cCCCCHHHHHHHHHh--CCEEE
Confidence 5799999999999999999999999999987 5 4456778888 4332 368999999999964 78898
Q ss_pred eCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEee
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKP 194 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP 194 (765)
+..... ...+.+.+++ |++ +||++++++++.||..+|++|+++|||+|++......+.+++.++++++|||+||||
T Consensus 92 ~e~e~~--~~~~l~~l~~-g~~-v~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~g~P~VvKp 167 (403)
T 3k5i_A 92 AEIEHV--DTYALEEVAS-EVK-IEPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENTPAELAKVGEQLGYPLMLKS 167 (403)
T ss_dssp ESSSCS--CHHHHHHHTT-TSE-ESSCHHHHHHHTSHHHHHHHHHTTTCCBCCEEEESSCCHHHHHHHHHHHCSSEEEEE
T ss_pred ECCCCC--CHHHHHHHHc-CCc-cCcCHHHHHHhcCHHHHHHHHHHCCcCCCCEEEEcCCCHHHHHHHHHHhCCCEEEEe
Confidence 875443 2667788888 998 899999999999999999999999999999876544488999999999999999999
Q ss_pred cCCC-CCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceee
Q 041518 195 THGG-GGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKI 273 (765)
Q Consensus 195 ~~g~-Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~ 273 (765)
..|+ +|+|++++++.+|+.++++.+ ++..+|+|+||++++|+++.++.+++| +..+...+..++.+...
T Consensus 168 ~~gg~~g~Gv~~v~~~~el~~a~~~~--------~~~~~lvEe~i~~~~E~sv~v~~~~~g--~~~~p~~~~~~~~g~~~ 237 (403)
T 3k5i_A 168 KTMAYDGRGNFRVNSQDDIPEALEAL--------KDRPLYAEKWAYFKMELAVIVVKTKDE--VLSYPTVETVQEDSICK 237 (403)
T ss_dssp SSSCCTTTTEEEECSTTSHHHHHHHT--------TTSCEEEEECCCEEEEEEEEEEECSSC--EEECCCEEEEEETTEEE
T ss_pred CCCCcCCCCEEEECCHHHHHHHHHhc--------CCCcEEEecCCCCCeEEEEEEEEcCCC--EEEeCCeeeEEeCCEEE
Confidence 9998 999999999999999988753 357999999999889999999999877 45555555666667667
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHc
Q 041518 274 IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVAN 353 (765)
Q Consensus 274 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~ 353 (765)
....|++.++++..+++.+++.+++++|||+|++++||++++ +|++||+|+|||+++....+...+|+|+++++++.++
T Consensus 238 ~~~~Pa~~l~~~~~~~~~~~a~~i~~~Lg~~G~~~ve~~~~~-dg~~~v~EiNpR~~~sg~~~~~~~~~s~~~~~~ra~~ 316 (403)
T 3k5i_A 238 LVYAPARNVSDAINQKAQELARKAVAAFDGKGVFGVEMFLLE-DDSIMLCEIASRIHNSGHYTIEGCALSQFDAHLRAIL 316 (403)
T ss_dssp EEEESCSSCCHHHHHHHHHHHHHHHHTSCCSEEEEEEEEEET-TSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHT
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeC-CCcEEEEEeecCCCCCCceeeeecCCCHHHHHHHHHc
Confidence 778899559999999999999999999999999999999997 7889999999999964444445679999999999999
Q ss_pred CCCCCCCCCCcccceEEEEEEecccC
Q 041518 354 GEPLPLSQSEVPLLGHAFEARIYAEN 379 (765)
Q Consensus 354 G~~l~~~~~~~~~~g~ai~~ri~ae~ 379 (765)
|.|++.. .....+.++...++.++
T Consensus 317 G~pl~~~--~~~~~~~a~m~nilg~~ 340 (403)
T 3k5i_A 317 DLPIPAQ--SLEIRQPSIMLNIIGGA 340 (403)
T ss_dssp TCCCCGG--GGSBSSCEEEEEEECCS
T ss_pred CCCCCcc--cccCCCcEEEEEEecCC
Confidence 9998732 23334567888888764
No 23
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.5e-40 Score=376.08 Aligned_cols=374 Identities=16% Similarity=0.198 Sum_probs=305.6
Q ss_pred CeEEEEecCCCCCC--cccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCCCccccc--HHHHHHHHHCCCc
Q 041518 61 IRTVAVYSDADRDS--LHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGFLSES--ADFAQLCGDNGLT 136 (765)
Q Consensus 61 i~vvav~s~~d~~~--~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~g~lsE~--~~~a~~~~~~Gl~ 136 (765)
+.+|+++++.|... ++.+.||+.+.+++.+..+++...+.|++++++.++|+|+|+ +|+ ..+++.+++.|++
T Consensus 52 ~~~Vav~~~~D~~~~~p~~~~Ad~~~~~~~~~~~~~~~~i~~I~~~a~~~~id~Vip~----sE~~l~~~a~~~e~~Gi~ 127 (474)
T 3vmm_A 52 KYSVAVIKDKDYFKSLADFEHPDSIYWAHEDHNKPEEEVVEQIVKVAEMFGADAITTN----NELFIAPMAKACERLGLR 127 (474)
T ss_dssp HHEEEEEECGGGCSSGGGGCCCSCCSSCCSCCCCCHHHHHHHHHHHHHHTTCSEEEES----CGGGHHHHHHHHHHTTCC
T ss_pred ceEEEEEeCCCcccCCcchhhcCeEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEC----CcccHHHHHHHHHHcCCC
Confidence 45678888777654 558999999988765555556778999999999999999994 577 7889999999998
Q ss_pred EECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHH
Q 041518 137 FIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSF 216 (765)
Q Consensus 137 ~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~ 216 (765)
||+++++..++||..+|++|+++|||+|++.... +.+++.++++++|||+||||..|+||+|++++++.+|+.+++
T Consensus 128 --g~~~~ai~~~~DK~~~k~~l~~~GIpvp~~~~v~--s~ee~~~~~~~lg~PvVVKP~~g~gg~Gv~iv~~~eel~~a~ 203 (474)
T 3vmm_A 128 --GAGVQAAENARDKNKMRDAFNKAGVKSIKNKRVT--TLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTETAEDEF 203 (474)
T ss_dssp --CSCHHHHHHTTCHHHHHHHHHHTTSCCCCEEEEC--SHHHHHHHHHHSCSSEEEEESSCCTTTTCEEECCTTSHHHHH
T ss_pred --CCCHHHHHHhhCHHHHHHHHHHcCCCCCCeEEEC--CHHHHHHHHHHcCCCEEEEECCCCcCceEEEECCHHHHHHHH
Confidence 9999999999999999999999999999997655 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-------cCCCCcEEEecccCCCee-----------EEEE-EEEeccccEEEEEeeeccccccceeeeeec
Q 041518 217 LGAQREAAA-------SFGINTILLEKYITQPRH-----------IEVQ-IFGDKYGKVLHLYERDCSVQRRHQKIIEEA 277 (765)
Q Consensus 217 ~~~~~ea~~-------~fg~~~vlVEeyI~ggre-----------i~v~-v~~d~~g~vv~l~~r~~s~~~~~~k~~e~~ 277 (765)
+.+.+++.. .+ ++.+|||+||+|.++ +++. ++.|+++..+.+.+++|+.+ +++..+.+
T Consensus 204 ~~~~~~~~~~~~~~a~~~-~~~vlVEe~I~G~e~~~~q~~~~~~e~sv~~v~~dg~~~~v~i~~~~~~~~--~~~~~~~~ 280 (474)
T 3vmm_A 204 NRVNDYLKSINVPKAVTF-EAPFIAEEFLQGEYGDWYQTEGYSDYISIEGIMADGEYFPIAIHDKTPQIG--FTETSHIT 280 (474)
T ss_dssp HHHHHHHTTSCCCTTCCC-SCSEEEEECCCBCHHHHCSSSSSCSEEEEEEEEETTEEEEEEEEEECCCBT--TBCCEEEE
T ss_pred HHHHHHHhhccccccccC-CCeEEEEeCCCCceeeeeecccccceeEEEEEEECCeEEEEEEEeeccCCC--ccceEEEE
Confidence 998876554 33 379999999997653 7886 45566666777788888776 77788899
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCCcee-EEEEEEECCCCcEEEEEecccCC--ccccccceecCCCHHHHHHHHHc-
Q 041518 278 PAPNVTHDFRALLGQAAVSAAKAVSYHNAG-TVEFIVDTVSDQFYFMEMNTRLQ--VEHPVTEMIVDQDLVEWQIRVAN- 353 (765)
Q Consensus 278 Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~-~vEf~~~~~~g~~~~iEiN~R~~--~~~~~~e~~tGvDl~~~~i~~a~- 353 (765)
|+ .++++.+++|.+.+.++++++||+|.+ |+||++++ +|++||||||||++ ..+++++.++|+|++++++++++
T Consensus 281 Pa-~l~~~~~~~l~~~a~~~~~alG~~g~~~~vef~~~~-dg~~~~iEvNpR~~G~~~~~~~~~~tG~dl~~~~i~~a~~ 358 (474)
T 3vmm_A 281 PS-ILDEEAKKKIVEAAKKANEGLGLQNCATHTEIKLMK-NREPGLIESAARFAGWNMIPNIKKVFGLDMAQLLLDVLCF 358 (474)
T ss_dssp SC-CCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEEEG-GGEEEEEEEESSCCSTTHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred CC-CCCHHHHHHHHHHHHHHHHHcCCCCccEEEEEEEcC-CCCEEEEEEeCCCCCCchHHHHHHHHCcCHHHHHHHHHcC
Confidence 99 699999999999999999999999877 69999997 78899999999999 56789999999999999999999
Q ss_pred CCCCCCCCCCcc-cceEEEEEEecccCCCCC-CCC-C--CcceeEEeeCCC---CCCcEEEEe-ccc----CCCeeCCcc
Q 041518 354 GEPLPLSQSEVP-LLGHAFEARIYAENVPKG-FLP-A--TGVLHHYHPVPV---SSKAVRVET-GVE----QGDTVSMHY 420 (765)
Q Consensus 354 G~~l~~~~~~~~-~~g~ai~~ri~ae~p~~~-f~p-~--~G~i~~~~~p~~---~~~~vrv~~-~v~----~G~~v~~~~ 420 (765)
|+++++.+..++ ..+++.+++++++.+... -.| . +-.|..+..|.. +.. +.+.. ... .-..+-.-|
T Consensus 359 G~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~p~~~~~~~i~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 437 (474)
T 3vmm_A 359 GKDADLPDGLLDQEPYYVADCHLYPQHFKQNGQIPETAEDLVIEAIDIPDGLLKGDT-EIVSFSAAAPGTSVDLTLFEAF 437 (474)
T ss_dssp GGGSCCCSSCCCCCSSEEEEEEECHHHHHHTTSSCTTCEEEEEEEEECCTTCCCTTC-EEEEEEECCTTEEECTTSCGGG
T ss_pred CCCCCCCcccccCCCceeEEEEEeccccccccccCCcccceeecceecccceecccc-eEeeccCCCCCceEEEEeehhc
Confidence 999998877765 467888999999886322 233 2 245778888863 233 55553 222 334556789
Q ss_pred CCcceEEEEEeeEEeccccCHHHHHHHhcCcC
Q 041518 421 DPMIANLWYGAKTVAGVPTNINFLQKLAKHRA 452 (765)
Q Consensus 421 d~~~~~~i~~g~~i~g~~tn~~~l~~~~~~~~ 452 (765)
||-++-++ +|+ --..+.+-|+.|+++-+
T Consensus 438 ~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~ 465 (474)
T 3vmm_A 438 NSIAAFEL-KGS---NSQDVAESIRQIQQHAK 465 (474)
T ss_dssp CCCEEEEE-EES---CHHHHHHHHHHHHHHCE
T ss_pred cCceeEEe-ccc---cHHHHHHHHHHHHHhhh
Confidence 99888777 663 11234567777777655
No 24
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=100.00 E-value=3e-39 Score=357.77 Aligned_cols=347 Identities=16% Similarity=0.208 Sum_probs=267.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
||||||+|+|..+..++++++++|+++++++.+++. +...++|..+.+ ++.|.+.+.+++ .++|+|+++
T Consensus 1 M~~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~~~~--~~~~~~~~~~~~-------~~~d~~~l~~~~--~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGGGQLGKMMTLEAKKMGFYVIVLDPTPRS--PAGQVADEQIVA-------GFFDSERIEDLV--KGSDVTTYD 69 (380)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTC--TTGGGSSEEEEC-------CTTCHHHHHHHH--HTCSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC--chhhhCceEEEC-------CCCCHHHHHHHH--hcCCEEEec
Confidence 589999999999999999999999999988765443 456788887754 357889999998 679999998
Q ss_pred CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecC
Q 041518 117 YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTH 196 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~ 196 (765)
++... ..+++.+++.|++ ++|+++++.+++||..+|++|+++|||+|++.... +.++ +++++|||+|+||..
T Consensus 70 ~e~~~--~~~~~~l~~~gi~-~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~--~~~~---~~~~~~~P~vvKp~~ 141 (380)
T 3ax6_A 70 LEHID--VQTLKKLYNEGYK-IHPSPYTLEIIQDKFVQKEFLKKNGIPVPEYKLVK--DLES---DVREFGFPVVQKARK 141 (380)
T ss_dssp CSCSC--HHHHHHHHHTTCE-ESSCHHHHHHHHSHHHHHHHHHHTTCCCCCEEECS--SHHH---HHHTTCSSEEEEESC
T ss_pred ccCCC--HHHHHHHHHCCCe-ECCCHHHHHHhcCHHHHHHHHHHcCCCCCCeEEeC--CHHH---HHHhcCCCEEEEecC
Confidence 76543 5667888999998 67999999999999999999999999999987654 6666 667899999999999
Q ss_pred CC-CCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccc--cccceee
Q 041518 197 GG-GGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSV--QRRHQKI 273 (765)
Q Consensus 197 g~-Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~--~~~~~k~ 273 (765)
|+ ||+|++++++.+|+.++++ ..+++|+||++++|+++.++.+++|++..+...+ .. ++.+...
T Consensus 142 ~~y~g~Gv~~v~~~~el~~~~~------------~~~lvEe~i~~g~e~sv~~~~~~~G~~~~~~~~~-~~~~~~~~~~~ 208 (380)
T 3ax6_A 142 GGYDGRGVFIIKNEKDLENAIK------------GETYLEEFVEIEKELAVMVARNEKGEIACYPVVE-MYFDEDANICD 208 (380)
T ss_dssp CC-----EEEECSGGGGGGCCC------------SSEEEEECCCEEEEEEEEEEECSSCCEEEEEEEE-EC--------C
T ss_pred CCCCCCCeEEECCHHHHHHHhc------------CCEEEEeccCCCeeEEEEEEECCCCCEEEECCee-eeecccCCeeE
Confidence 99 9999999999999876553 5899999999779999999998778776553221 12 2233233
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHc
Q 041518 274 IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVAN 353 (765)
Q Consensus 274 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~ 353 (765)
....|++ ++++..+++.+++.++++++||+|++++||++++ +|++||+|+|||+++.+..+...+|+|+++++++.++
T Consensus 209 ~~~~p~~-l~~~~~~~~~~~a~~~~~~lg~~G~~~vd~~~~~-~g~~~viEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (380)
T 3ax6_A 209 TVIAPAR-IEEKYSKIAREIATSVVEALEGVGIFGIEMFLTK-QGEILVNEIAPRPHNSGHYTIEACVTSQFEQHIRAIM 286 (380)
T ss_dssp EEEESCS-SCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET-TSCEEEEEEESSCCGGGTHHHHHBSSCHHHHHHHHHT
T ss_pred EEECCCC-CCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEEeC-CCcEEEEEecCCCCCCceeehhhccccHHHHHHHHHh
Confidence 4467884 8999999999999999999999999999999997 7889999999999977777778899999999999999
Q ss_pred CCCCCCCCCCcccceEEEEEEecccCCCCCCCC-CCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe
Q 041518 354 GEPLPLSQSEVPLLGHAFEARIYAENVPKGFLP-ATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA 431 (765)
Q Consensus 354 G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p-~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g 431 (765)
|.+++... . .+.++.+++++.+...+..+ ..| +..+. .|+ +++... |..+.. ....+|+++++|
T Consensus 287 g~~l~~~~--~--~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~----~p~-~~~~~~---g~~~~~-~~~~lg~v~~~g 351 (380)
T 3ax6_A 287 NLPLGSTE--L--LIPAVMVNLLGEEGYYGKPALIGL-EEALA----IEG-LSLHFY---GKKETR-PYRKMGHFTVVD 351 (380)
T ss_dssp TCCCCCCC--B--CSCEEEEEEEBCTTCCBSEEEESH-HHHHT----STT-EEEEEC---CCSCBC-BTCEEEEEEEEC
T ss_pred CCCCCCcc--c--cCceEEEEEecccccccccccchh-HHHhc----CCC-CEEEec---CCCCCC-CCCeeEEEEEEe
Confidence 99987422 1 23366788887654211111 233 33222 245 665553 322221 234689999887
No 25
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=100.00 E-value=1.5e-38 Score=353.40 Aligned_cols=296 Identities=18% Similarity=0.200 Sum_probs=253.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
+.|+|+|+|+|.++.+++++|+++|+++++++.++ +++...++|..+.. +|.|.+.+.+++++ +|+|.+
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~--~~~~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvI~~ 81 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK--NSPCAQVADIEIVA-------SYDDLKAIQHLAEI--SDVVTY 81 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST--TCTTTTTCSEEEEC-------CTTCHHHHHHHHHT--CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC--CCchHHhCCceEec-------CcCCHHHHHHHHHh--CCEeee
Confidence 35799999999999999999999999999986544 45678899988753 57899999999964 788866
Q ss_pred CCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeec
Q 041518 116 GYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPT 195 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~ 195 (765)
+++ .....+++.+++.|+ +||+++++..+.||..+|++|+++|||+|++.... +.+++.++++++|||+||||.
T Consensus 82 ~~e--~~~~~~~~~l~~~g~--~~~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~--~~~~~~~~~~~~g~P~vvKp~ 155 (389)
T 3q2o_A 82 EFE--NIDYRCLQWLEKHAY--LPQGSQLLSKTQNRFTEKNAIEKAGLPVATYRLVQ--NQEQLTEAIAELSYPSVLKTT 155 (389)
T ss_dssp SCC--CCCHHHHHHHHHHSC--CTTCSHHHHHTTSHHHHHHHHHHTTCCCCCEEEES--SHHHHHHHHHHHCSSEEEEES
T ss_pred ccc--cccHHHHHHHHhhCc--cCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEEC--CHHHHHHHHHhcCCCEEEEeC
Confidence 654 344677788888886 78999999999999999999999999999998665 899999999999999999999
Q ss_pred CCCC-CccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeee
Q 041518 196 HGGG-GKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKII 274 (765)
Q Consensus 196 ~g~G-g~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~ 274 (765)
.|++ |+|++++++.+|+.++++.+. +.++|+|+||+|++|+++.++.|.+|++..+...++ .++......
T Consensus 156 ~~~~~g~Gv~~v~~~~el~~~~~~~~--------~~~~lvEe~i~g~~E~~v~~~~~~~G~~~~~~~~e~-~~~~g~~~~ 226 (389)
T 3q2o_A 156 TGGYDGKGQVVLRSEADVDEARKLAN--------AAECILEKWVPFEKEVSVIVIRSVSGETKVFPVAEN-IHVNNILHE 226 (389)
T ss_dssp SCCSSSCCEEEESSGGGHHHHHHHHH--------HSCEEEEECCCCSEEEEEEEEECTTCCEEECCCEEE-EEETTEEEE
T ss_pred CCCCCCCCeEEECCHHHHHHHHHhcC--------CCCEEEEecccCceEEEEEEEEcCCCCEEEecCeee-EEcCCceEE
Confidence 9976 799999999999999987653 369999999997799999999998888766543322 222222233
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcC
Q 041518 275 EEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANG 354 (765)
Q Consensus 275 e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G 354 (765)
...|+ .++++..+++.+++.++++++|++|++++||++++ +|++||+|+|||++.+.+.+...+|+|+++++++.++|
T Consensus 227 ~~~p~-~l~~~~~~~~~~~a~~~~~~lg~~G~~~ve~~~~~-dg~~~viEiNpR~~~s~~~~~~~~g~~~~~~~~r~~lg 304 (389)
T 3q2o_A 227 SIVPA-RITEELSQKAIAYAKVLADELELVGTLAVEMFATA-DGEIYINELAPRPHNSGHYTQDACETSQFGQHIRAICN 304 (389)
T ss_dssp EEESC-SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT-TSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHHT
T ss_pred EECCC-CCCHHHHHHHHHHHHHHHHHcCCeeEEEEEEEEeC-CCCEEEEEeeCCCCCchhHHHHHcCCCHHHHHHHHHcC
Confidence 44687 69999999999999999999999999999999997 78899999999999888888889999999999999999
Q ss_pred CCCCC
Q 041518 355 EPLPL 359 (765)
Q Consensus 355 ~~l~~ 359 (765)
.|++.
T Consensus 305 ~~l~~ 309 (389)
T 3q2o_A 305 LPLGE 309 (389)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99873
No 26
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=100.00 E-value=3.5e-38 Score=349.16 Aligned_cols=311 Identities=19% Similarity=0.291 Sum_probs=253.5
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 35 QRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 35 ~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
.++++|+|+|+|..+.+++++++++|+++++++.++ +++..++||+.+.. +|.|.+.+.+++++ +|+|.
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~--~~p~~~~ad~~~~~-------~~~d~~~l~~~~~~--~dvi~ 78 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSE--DCPCRYVAHEFIQA-------KYDDEKALNQLGQK--CDVIT 78 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT--TCTTGGGSSEEEEC-------CTTCHHHHHHHHHH--CSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC--CChhhhhCCEEEEC-------CCCCHHHHHHHHHh--CCcce
Confidence 346899999999999999999999999999986544 45788899998863 47899999999976 78887
Q ss_pred eCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEee
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKP 194 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP 194 (765)
+++.... ......+++.+ .++|++++++++.||..+|++++++|||+|++.... +.+++.++++++|||+|+||
T Consensus 79 ~~~E~~~--~~~l~~l~~~~--~v~p~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~--~~~~~~~~~~~~g~P~vvKp 152 (377)
T 3orq_A 79 YEFENIS--AQQLKLLCEKY--NIPQGYQAIQLLQDRLTEKETLKSAGTKVVPFISVK--ESTDIDKAIETLGYPFIVKT 152 (377)
T ss_dssp ESSTTSC--HHHHHHHHHHS--CCTTTTHHHHHHHSHHHHHHHHHHTTCCBCCEEEEC--SSTHHHHHHHHTCSSEEEEE
T ss_pred ecccccC--HHHHHHHhhhc--CCCCCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEEC--CHHHHHHHHHHcCCCEEEEe
Confidence 7653221 33444454443 357999999999999999999999999999997655 88899999999999999999
Q ss_pred cCCC-CCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceee
Q 041518 195 THGG-GGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKI 273 (765)
Q Consensus 195 ~~g~-Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~ 273 (765)
..|+ ||+|++++++.+|+.++++.+. ...+++|+||+|.+|+++.++.+.+|++..+...+. ..+.....
T Consensus 153 ~~gg~~g~Gv~~v~~~~el~~a~~~~~--------~~~~ivEe~i~g~~E~sv~~~~~~~g~~~~~~~~e~-~~~~g~~~ 223 (377)
T 3orq_A 153 RFGGYDGKGQVLINNEKDLQEGFKLIE--------TSECVAEKYLNIKKEVSLTVTRGNNNQITFFPLQEN-EHRNQILF 223 (377)
T ss_dssp SSSCCTTTTEEEECSTTSHHHHHHHHT--------TSCEEEEECCCEEEEEEEEEEECGGGCEEECCCEEE-EEETTEEE
T ss_pred CCCCCCCCCeEEECCHHHHHHHHHhcC--------CCcEEEEccCCCCEEEEEEEEEeCCCCEEEECCEeE-EEECCEEE
Confidence 9998 8999999999999999987753 379999999997699999999887787766532222 22222223
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHc
Q 041518 274 IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVAN 353 (765)
Q Consensus 274 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~ 353 (765)
....|+ .+++ .+++.+++.++++++||+|++++||++++ +|++||+|||||++++..++...+++|+++++++.++
T Consensus 224 ~~~~Pa-~l~~--~~~~~~~a~~i~~~lg~~G~~~ve~~~~~-~g~~~v~EinpR~~~sg~~t~~~~~~s~f~~~~ra~~ 299 (377)
T 3orq_A 224 KTIVPA-RIDK--TAEAKEQVNKIIQSIHFIGTFTVEFFIDS-NNQLYVNEIAPRPHNSGHYSIEACDYSQFDTHILAVT 299 (377)
T ss_dssp EEEESC-SSCC--HHHHHHHHHHHHTTSCCCEEEEEEEEEET-TCCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHT
T ss_pred EEECCC-CCCH--HHHHHHHHHHHHHHCCCeEEEEEEEEEeC-CCcEEEEEeeCCcCCCCcEeehhcCCCHHHHHHHHHc
Confidence 345687 5666 78999999999999999999999999997 7889999999999977777777889999999999999
Q ss_pred CCCCCCCCCCcccceEEEEEEeccc
Q 041518 354 GEPLPLSQSEVPLLGHAFEARIYAE 378 (765)
Q Consensus 354 G~~l~~~~~~~~~~g~ai~~ri~ae 378 (765)
|.|++.. +.....++...++.+
T Consensus 300 G~pl~~~---~~~~~~~~m~n~lg~ 321 (377)
T 3orq_A 300 GQSLPNS---IELLKPAVMMNLLGK 321 (377)
T ss_dssp TCCCCSC---CCBSSCEEEEEEEHH
T ss_pred CCCCCcc---ccccccEEEEEEeCc
Confidence 9998720 233444667777754
No 27
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=100.00 E-value=3e-38 Score=345.69 Aligned_cols=286 Identities=12% Similarity=0.100 Sum_probs=237.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
||||+|+|+|+.+++++.+++++|+++ ++.++++ +. + + .+ .++|+|+|.
T Consensus 1 Mk~igilGgGqlg~m~~~aa~~lG~~v--~~~~~~a--~~-------~-~---------~~----------l~~d~it~e 49 (355)
T 3eth_A 1 MKQVCVLGNGQLGRMLRQAGEPLGIAV--WPVGLDA--EP-------A-A---------VP----------FQQSVITAE 49 (355)
T ss_dssp CCEEEEESCSHHHHHHHHHHGGGTCEE--EEECTTC--CG-------G-G---------CC----------CTTSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEE--ECCCCCC--Cc-------e-E---------Ec----------ccCCEEEEC
Confidence 689999999999999999999999998 3333332 22 0 0 11 189999999
Q ss_pred CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecC
Q 041518 117 YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTH 196 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~ 196 (765)
+++++. .+.+.+++.| +++|+++++.++.||..+|++++++|||+|++.... +.+++.++++++|||+||||+.
T Consensus 50 ~e~v~~--~~l~~l~~~~--~v~p~~~a~~~~~DK~~~k~~l~~~GIptp~~~~v~--~~~e~~~~~~~~G~P~VvKp~~ 123 (355)
T 3eth_A 50 IERWPE--TALTRQLARH--PAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLA--ERSEWPAVFDRLGELAIVKRRT 123 (355)
T ss_dssp CSCCCC--CHHHHHHHTC--TTBTTTTHHHHHHSHHHHHHHHHHTTCCBCCEEEEC--CGGGHHHHHHHHCSEEEEEESS
T ss_pred cCCcCH--HHHHHHHhcC--CcCCCHHHHHHhcCHHHHHHHHHHCccCCCCEEEEC--CHHHHHHHHHHcCCCEEEEecC
Confidence 988874 3567778877 578999999999999999999999999999997655 8899999999999999999998
Q ss_pred C-CCCccEEEECC--hhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceee
Q 041518 197 G-GGGKGMRIVQS--PNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKI 273 (765)
Q Consensus 197 g-~Gg~Gv~~v~s--~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~ 273 (765)
+ ++|+|++++++ .+|+.+++ ++ .+|+|+||++++|+++.++.+.+|++..+...+ ..++.+...
T Consensus 124 ~G~~GkGv~~v~~~~~~el~~a~----------~~--~vivEe~I~~~~Eisv~v~~~~~G~~~~~p~~e-~~~~~g~~~ 190 (355)
T 3eth_A 124 GGYDGRGQWRLRANETEQLPAEC----------YG--ECIVEQGINFSGEVSLVGARGFDGSTVFYPLTH-NLHQDGILR 190 (355)
T ss_dssp SCCTTTTEEEEETTCGGGSCGGG----------TT--TEEEEECCCCSEEEEEEEEECTTSCEEECCCEE-EEEETTEEE
T ss_pred CCCCCCeEEEEcCCCHHHHHHHh----------hC--CEEEEEccCCCcEEEEEEEEcCCCCEEEECCEE-EEeeCCeEE
Confidence 5 78899999999 99987743 33 799999999889999999999888876542211 233343323
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHc
Q 041518 274 IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVAN 353 (765)
Q Consensus 274 ~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~ 353 (765)
....|+ .++++..+++.+++.+++++|||+|+++|||++++ +++||+|+|||++++++++...+++|+++++++.++
T Consensus 191 ~~~~pa-~l~~~~~~~~~~~a~~i~~aLg~~G~~~vEf~~~~--~~~~v~EinpR~~~sg~~t~~~~~~s~fe~~~ra~~ 267 (355)
T 3eth_A 191 TSVAFP-QANAQQQARAEEMLSAIMQELGYVGVMAMECFVTP--QGLLINELAPRVHNSGHWTQNGASISQFELHLRAIT 267 (355)
T ss_dssp EEEECS-SCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEET--TEEEEEEEESSCCGGGTTHHHHSSSCHHHHHHHHHT
T ss_pred EEECCC-CCCHHHHHHHHHHHHHHHHHCCCeeEEEEEEEEEC--CcEEEEEeeCCCCCCccEEeeeecCCHHHHHHHHHc
Confidence 334566 79999999999999999999999999999999994 679999999999998899999999999999999999
Q ss_pred CCCCCCCCCCcccceEEEEEEecccC
Q 041518 354 GEPLPLSQSEVPLLGHAFEARIYAEN 379 (765)
Q Consensus 354 G~~l~~~~~~~~~~g~ai~~ri~ae~ 379 (765)
|.|++. +.....++...++.++
T Consensus 268 G~pl~~----~~~~~~~~m~nilg~~ 289 (355)
T 3eth_A 268 DLPLPQ----PVVNNPSVMINLIGSD 289 (355)
T ss_dssp TCCCCC----CCCCSCEEEEEEESCC
T ss_pred CCCCCC----ccccCceEEEEEecch
Confidence 999873 3334557788888654
No 28
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=100.00 E-value=5.2e-38 Score=352.90 Aligned_cols=354 Identities=17% Similarity=0.223 Sum_probs=264.6
Q ss_pred EEEEEcCcHHHHHHHHHH-HHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC
Q 041518 39 KILIANRGEIAYRIMRTA-KRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY 117 (765)
Q Consensus 39 kILI~g~G~~a~~iiraa-r~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~ 117 (765)
||||+|+|.....+++.+ +++|++++.++.. ++ .....+| .+. -+|.|.+.++++++++++|+|+|+.
T Consensus 2 ~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~~--~~~~~~~-~~~-------~~~~d~~~l~~~~~~~~~d~v~~~~ 70 (424)
T 2yw2_A 2 KVLVVGNGGREHAIAWKVAQSPLVKELYVAKG-NA--GIWEIAK-RVD-------ISPTDVEKLAEFAKNEGVDFTIVGP 70 (424)
T ss_dssp EEEEEESSHHHHHHHHHHTTCTTCSEEEEEEC-CT--TGGGTSE-EEC-------SCTTCHHHHHHHHHHHTCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHhhCCCCCEEEEECC-Cc--chhhhcc-ccc-------CCcCCHHHHHHHHHHcCCCEEEECC
Confidence 799999995444444443 5789998877643 32 2344555 332 2568999999999999999999974
Q ss_pred CcccccH---HHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEee
Q 041518 118 GFLSESA---DFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKP 194 (765)
Q Consensus 118 g~lsE~~---~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP 194 (765)
|+. .+++.+++.|++++||+++++++++||..+|++|+++|||+|++.... +.+++.++++++|||+||||
T Consensus 71 ----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~--~~~~~~~~~~~~~~PvvvKp 144 (424)
T 2yw2_A 71 ----EAPLVEGIVDEFEKRGLKIFGPNKEAAKLEGSKAFAKTFMKKYGIPTARYEVFT--DFEKAKEYVEKVGAPIVVKA 144 (424)
T ss_dssp ----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEEEES--CHHHHHHHHHHHCSSEEEEE
T ss_pred ----chHHHHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHcCCCCCCeEEEC--CHHHHHHHHHHcCCcEEEEe
Confidence 554 467888999999999999999999999999999999999999987655 89999999999999999999
Q ss_pred cCCCCCccEEEECChhHHHHHHHHHHHHHHhcCC--CCcEEEecccCCCeeEEEEEEEeccccEEEEEeeecccccccee
Q 041518 195 THGGGGKGMRIVQSPNDFVDSFLGAQREAAASFG--INTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQK 272 (765)
Q Consensus 195 ~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg--~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k 272 (765)
..|+||+||++++|.+|+.++++.+.. .+.|+ ...++||+||+ ++|+++.++.|+ +.+... ...+++++
T Consensus 145 ~~g~gg~Gv~~v~~~~el~~~~~~~~~--~~~~g~~~~~~lvEe~i~-g~E~sv~~~~~G--~~~~~~----~~~~~~~~ 215 (424)
T 2yw2_A 145 DGLAAGKGAVVCETVEKAIETLDRFLN--KKIFGKSSERVVIEEFLE-GEEASYIVMING--DRYVPL----PTSQDHKR 215 (424)
T ss_dssp SSCCTTCSEEEESSHHHHHHHHHHHHT--SCTTGGGGSSEEEEECCC-SEEEEEEEEEET--TEEEEC----CCBEECCE
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHh--hhhccCCCCeEEEEECCC-CcEEEEEEEEcC--CEEEee----cceeeccc
Confidence 999999999999999999999988764 12243 26899999999 689999999864 433332 22333333
Q ss_pred ee------------eecCCCCCCHHHHHHHH-HHHHHHHHHc-----CCCceeEEEEEEECCCCcEEEEEecccCCccc-
Q 041518 273 II------------EEAPAPNVTHDFRALLG-QAAVSAAKAV-----SYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEH- 333 (765)
Q Consensus 273 ~~------------e~~Pa~~l~~~~~~~l~-~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~- 333 (765)
.. ...|++.+++++.+++. +++.++++++ +|.|++++||++++ +| +||+|+|||++...
T Consensus 216 ~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~-~g-~~viEiN~R~g~~~~ 293 (424)
T 2yw2_A 216 LLDEDKGPNTGGMGAYSPTPVINEEVEKRIREEIVERVIKGLKEEGIYYRGFLYAGLMITK-EG-PKVLEFNVRLGDPEA 293 (424)
T ss_dssp EETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHHTCCCEEEEEEEEEEET-TE-EEEEEEESSCCTTTH
T ss_pred cccCCCCCCCCCCeeECCCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeC-CC-cEEEEEecCCCCcHH
Confidence 32 33688568999988884 6787777765 78899999999997 66 99999999997322
Q ss_pred cccceecCCCHHHHHHHHHcCCCCCCCCCCccc-ceEEEEEEecccCCCCCCCCCCcc-eeEEeeCCCCCCcEEEEeccc
Q 041518 334 PVTEMIVDQDLVEWQIRVANGEPLPLSQSEVPL-LGHAFEARIYAENVPKGFLPATGV-LHHYHPVPVSSKAVRVETGVE 411 (765)
Q Consensus 334 ~~~e~~tGvDl~~~~i~~a~G~~l~~~~~~~~~-~g~ai~~ri~ae~p~~~f~p~~G~-i~~~~~p~~~~~~vrv~~~v~ 411 (765)
..++..+|+|+.+++++++.|. ++ ++.+ .++++.++++++++.. .|..|. |..+..+...++ +++. .
T Consensus 294 ~~i~~~~g~d~~~~~~~~~~g~-l~----~~~~~~~~a~~~~~~~~g~~~--~~~~g~~i~~~~~~~~~~~-~~~~---~ 362 (424)
T 2yw2_A 294 QPILMRVKNDFLETLLNFYEGK-DV----HIKEDERYALDVVLASRGYPE--KPETGKIIHGLDYLKSMED-VVVF---H 362 (424)
T ss_dssp HHHHHTBCSCHHHHHHHHHTTC-CC----CCCBCSSEEEEEEEECTTTTS--SCCCCCBCBCHHHHHTSTT-EEEE---E
T ss_pred HHHHHHhCCCHHHHHHHHHcCC-CC----cccccCCcEEEEEEecCCCCC--CCCCCCcCcCcccccCCCC-eEEE---E
Confidence 2334468999999999999997 33 1223 3788899998875432 456665 554443321355 7653 2
Q ss_pred CCCeeC----CccCCcceEEEEEe
Q 041518 412 QGDTVS----MHYDPMIANLWYGA 431 (765)
Q Consensus 412 ~G~~v~----~~~d~~~~~~i~~g 431 (765)
.|..+. ......+|+++++|
T Consensus 363 ~g~~~~~~~~~~~~~r~~~v~~~g 386 (424)
T 2yw2_A 363 AGTKKEGNFTVTSGGRVLNVCAYG 386 (424)
T ss_dssp SSEEEETTEEEECSSEEEEEEEEE
T ss_pred cceEeeCCEEEecCCcEEEEEEEe
Confidence 565543 11123578999887
No 29
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=356.63 Aligned_cols=362 Identities=16% Similarity=0.178 Sum_probs=262.2
Q ss_pred CCcCCCCEEEEEcCcHHHHHHHHH-HHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 32 DKQQRIEKILIANRGEIAYRIMRT-AKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 32 ~~~~~~kkILI~g~G~~a~~iira-ar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
...+|++||||+|+|.....+++. ++++|++++++....+. +. ..++ ...+. -+|.|.+.+++++++.++
T Consensus 19 ~~~~m~~~IlIlG~g~r~~al~~~~a~~~g~~~v~~~~~~~~--~~-~~~~-~~~~~-----~~~~d~~~l~~~~~~~~~ 89 (452)
T 2qk4_A 19 YFQSMAARVLIIGSGGREHTLAWKLAQSHHVKQVLVAPGNAG--TA-CSEK-ISNTA-----ISISDHTALAQFCKEKKI 89 (452)
T ss_dssp ---CCSEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECCGG--GS-BSSS-EEECC-----CCSSCHHHHHHHHHHHTC
T ss_pred cccccCcEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCChh--hh-hhcc-ccccc-----cCCCCHHHHHHHHHHcCC
Confidence 334466899999999755555555 46789997777543222 22 3444 22232 257899999999999999
Q ss_pred CEEEeCCCcccccH---HHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhC
Q 041518 111 QAIHPGYGFLSESA---DFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIG 187 (765)
Q Consensus 111 DaV~pg~g~lsE~~---~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig 187 (765)
|+|+|+. |+. .+++.+++.|++++||+++++++++||..+|++|+++|||+|++.... +.+++.++++++|
T Consensus 90 d~V~~~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~--~~~~~~~~~~~~g 163 (452)
T 2qk4_A 90 EFVVVGP----EAPLAAGIVGNLRSAGVQCFGPTAEAAQLESSKRFAKEFMDRHGIPTAQWKAFT--KPEEACSFILSAD 163 (452)
T ss_dssp CEEEECS----SHHHHTTHHHHHHHTTCCEESCCTTTTHHHHBHHHHHHHHHHTTCCBCCEEEES--SHHHHHHHHHHCS
T ss_pred CEEEECC----cHHHHHHHHHHHHhcCCcEeCcCHHHHHHhcCHHHHHHHHHHCCCCCCCeEEEC--CHHHHHHHHHhCC
Confidence 9999974 554 467888999999999999999999999999999999999999987655 8899999999999
Q ss_pred Cc-EEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCC--CCcEEEecccCCCeeEEEEEEEeccccEEEEEeeec
Q 041518 188 YP-ILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFG--INTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDC 264 (765)
Q Consensus 188 ~P-vVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg--~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~ 264 (765)
|| +||||..|+||+|++++++.+|+.++++.+... +.|+ ...++||+||+ ++|+++.++.|++ .++.+..
T Consensus 164 ~P~vvvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-G~E~sv~~~~dG~-~~~~~~~--- 236 (452)
T 2qk4_A 164 FPALVVKASGLAAGKGVIVAKSKEEACKAVQEIMQE--KAFGAAGETIVIEELLD-GEEVSCLCFTDGK-TVAPMPP--- 236 (452)
T ss_dssp SCEEEEEESBC---CCEEECSSHHHHHHHHHHHTTC---------CCEEEEECCC-SEEEEEEEEECSS-CEEECCC---
T ss_pred CCeEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCC-CCeEEEEEEECCC-EEEEcce---
Confidence 99 999999999999999999999999999876531 1243 36899999999 6899999998543 3444421
Q ss_pred ccccccee------------eeeecCCCCCCHHHHHHHH-HHHHHHHHHc-----CCCceeEEEEEEECCCCcEEEEEec
Q 041518 265 SVQRRHQK------------IIEEAPAPNVTHDFRALLG-QAAVSAAKAV-----SYHNAGTVEFIVDTVSDQFYFMEMN 326 (765)
Q Consensus 265 s~~~~~~k------------~~e~~Pa~~l~~~~~~~l~-~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiN 326 (765)
.+++++ .....|++.+++++.+++. +++.++++++ +|.|++++||++++ +| +||+|+|
T Consensus 237 --~~~~~~~~~~~~~~~~g~~~~~~P~~~l~~~~~~~~~~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~-~g-~~viEiN 312 (452)
T 2qk4_A 237 --AQDHKRLLEGDGGPNTGGMGAYCPAPQVSNDLLLKIKDTVLQRTVDGMQQEGTPYTGILYAGIMLTK-NG-PKVLEFN 312 (452)
T ss_dssp --BEEEEEEETTTEEEEEEEEEEEESCTTCCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEEET-TE-EEEEEEE
T ss_pred --eeecccccCCCCCCCCCCceeeccCccCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeC-CC-cEEEEEe
Confidence 122221 2234688668999988886 6777777664 67899999999997 66 9999999
Q ss_pred ccCCcccc-ccceecCCCHHHHHHHHHcCCCCCCCCCCccc-ceE-EEEEEecccCCCCCCCCCCc-ceeEEeeCCCCCC
Q 041518 327 TRLQVEHP-VTEMIVDQDLVEWQIRVANGEPLPLSQSEVPL-LGH-AFEARIYAENVPKGFLPATG-VLHHYHPVPVSSK 402 (765)
Q Consensus 327 ~R~~~~~~-~~e~~tGvDl~~~~i~~a~G~~l~~~~~~~~~-~g~-ai~~ri~ae~p~~~f~p~~G-~i~~~~~p~~~~~ 402 (765)
||+++... .....+|+|+.+++++++.|.. + +.++.+ .++ ++.++++++++.. .|.+| .|..+..+. .++
T Consensus 313 ~R~~~~~~~~i~~~~g~d~~~~~~~~~~g~l-~--~~~~~~~~~~~a~~~~l~~~g~~~--~~~~g~~i~~l~~~~-~~~ 386 (452)
T 2qk4_A 313 CRFGDPECQVILPLLKSDLYEVIQSTLDGLL-C--TSLPVWLENHTALTVVMASKGYPG--DYTKGVEITGFPEAQ-ALG 386 (452)
T ss_dssp SSCCTTTHHHHGGGBCSCHHHHHHHHHTTCG-G--GGCCCBCTTCEEEEEEEECTTTTS--SCCCSCBCBCHHHHH-HTT
T ss_pred ccCCCcHHHHHHHHhCCCHHHHHHHHHcCCC-C--cccceecCCCcEEEEEEECCCCCC--CCCCCCcccCccccC-CCC
Confidence 99984332 2345679999999999999973 2 112232 255 8889998876432 46667 566554331 245
Q ss_pred cEEEEecccCCCeeCCccCC------cceEEEEEe
Q 041518 403 AVRVETGVEQGDTVSMHYDP------MIANLWYGA 431 (765)
Q Consensus 403 ~vrv~~~v~~G~~v~~~~d~------~~~~~i~~g 431 (765)
+++. ..|+.++ +++ .+|+++++|
T Consensus 387 -v~~~---~~G~~~~--~~~~~~~~~rv~~v~~~g 415 (452)
T 2qk4_A 387 -LEVF---HAGTALK--NGKVVTHGGRVLAVTAIR 415 (452)
T ss_dssp -CEEE---ESSEEEE--TTEEEECSSEEEEEEEEE
T ss_pred -cEEE---ECcEEee--CCeEEecCCeEEEEEEec
Confidence 6653 2666653 343 458888887
No 30
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=5.6e-37 Score=343.86 Aligned_cols=347 Identities=18% Similarity=0.214 Sum_probs=262.3
Q ss_pred EEEEEcCcHHHHHHHHHH-HHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC
Q 041518 39 KILIANRGEIAYRIMRTA-KRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY 117 (765)
Q Consensus 39 kILI~g~G~~a~~iiraa-r~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~ 117 (765)
||||+|+|.....+++++ +++|++++.+... ++ .....++ . + . +|.|.+.++++++++++|+|+|+.
T Consensus 2 kililG~g~r~~a~a~~l~~~~g~~~v~~~~~-~~--~~~~~~~-~--~-----~-~~~d~~~l~~~~~~~~~d~v~~~~ 69 (417)
T 2ip4_A 2 KVLVVGSGGREHALLWKAAQSPRVKRLYAAPG-NA--GMEALAE-L--V-----P-WNGDVEALADWALAEGIDLTLVGP 69 (417)
T ss_dssp EEEEEESSHHHHHHHHHHHTCSSCCEEEEEEC-CT--TGGGTSE-E--C-----C-CCSCHHHHHHHHHHHTCCEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEECC-Cc--chhhhcc-c--C-----C-CccCHHHHHHHHHHcCCCEEEECC
Confidence 799999996555566666 4589998777543 22 2233343 2 2 1 578999999999999999999984
Q ss_pred CcccccH---HHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEee
Q 041518 118 GFLSESA---DFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKP 194 (765)
Q Consensus 118 g~lsE~~---~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP 194 (765)
|+. .+++.+++.|++++||+++++++++||..+|++|+++|||+|++.... +.+++.+++++++||+||||
T Consensus 70 ----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~~--~~~~~~~~~~~~~~P~vvKp 143 (417)
T 2ip4_A 70 ----EAPLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARYRVFR--EPLEALAYLEEVGVPVVVKD 143 (417)
T ss_dssp ----SHHHHTTHHHHHHHHTCCEESCCHHHHHHHHCHHHHHHHHHHTCCCBCCEEEES--SHHHHHHHHHHHCSSEEEEC
T ss_pred ----chHHHHHHHHHHHHCCCCEECccHHHHHHHcCHHHHHHHHHHcCCCCCCeeeeC--CHHHHHHHHHHcCCCEEEEE
Confidence 554 467888999999999999999999999999999999999999987655 89999999999999999999
Q ss_pred cCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceee-
Q 041518 195 THGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKI- 273 (765)
Q Consensus 195 ~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~- 273 (765)
..|+||+||+++++.+|+.++++.+. ...|+ ..+++|+||+ ++|+++.++.|+ +.+..+ ...+++++.
T Consensus 144 ~~~~gg~Gv~~v~~~~el~~~~~~~~---~~~~~-~~~lvEe~i~-g~E~sv~~~~~G--~~~~~~----~~~~~~~~~~ 212 (417)
T 2ip4_A 144 SGLAAGKGVTVAFDLHQAKQAVANIL---NRAEG-GEVVVEEYLE-GEEATVLALTDG--ETILPL----LPSQDHKRLL 212 (417)
T ss_dssp TTSCSSTTCEEESCHHHHHHHHHHHT---TSSSC-CCEEEEECCC-SCEEEEEEEESS--SCEEEC----CCBEECCEEE
T ss_pred CCCCCCCCEEEeCCHHHHHHHHHHHH---hhccC-CeEEEEECcc-CcEEEEEEEEeC--CEEEEc----chheechhhc
Confidence 99999999999999999999988764 12243 7899999999 689999999854 333332 122223222
Q ss_pred -----------eeecCCCCCCHHHHHHH-HHHHHHHHHHc-----CCCceeEEEEEEECCCCcEEEEEecccCCccc-cc
Q 041518 274 -----------IEEAPAPNVTHDFRALL-GQAAVSAAKAV-----SYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEH-PV 335 (765)
Q Consensus 274 -----------~e~~Pa~~l~~~~~~~l-~~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~-~~ 335 (765)
....|++ ++++..+++ .+++.++++++ +|.|++++||++++ +| +||+|+|||+++.. ..
T Consensus 213 ~~~~~~~~g~~~~~~p~~-l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~-~g-~~viEiN~R~g~~~~~~ 289 (417)
T 2ip4_A 213 DGDQGPMTGGMGAVAPYP-MDEATLRRVEEEILGPLVRGLRAEGVVYRGVVYAGLMLTR-EG-PKVLEFNARFGDPEAQA 289 (417)
T ss_dssp TTTEEEECSCSEEEESCC-CCHHHHHHHHHHTHHHHHHHHHHTTCCCCEEEEEEEEECS-SC-EEEEEEESSCCTTHHHH
T ss_pred cCCCCCcCCCCeeeeCCC-CCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEEeC-CC-eEEEEEecCCCCcHHHH
Confidence 2347885 899998888 66677777765 78899999999997 77 99999999997432 22
Q ss_pred cceecCCCHHHHHHHHHcCCCCCCCCCCccc-ceEEEEEEecccCCCCCCCCCCcc-eeEEeeCCCCCCcEEEEecccCC
Q 041518 336 TEMIVDQDLVEWQIRVANGEPLPLSQSEVPL-LGHAFEARIYAENVPKGFLPATGV-LHHYHPVPVSSKAVRVETGVEQG 413 (765)
Q Consensus 336 ~e~~tGvDl~~~~i~~a~G~~l~~~~~~~~~-~g~ai~~ri~ae~p~~~f~p~~G~-i~~~~~p~~~~~~vrv~~~v~~G 413 (765)
....+|+|+.+++++++.|.... .++.+ .++++..++.++++.. .|..|. |..+..+ ++ +++.. .|
T Consensus 290 i~~~~g~d~~~~~~~~~~g~l~~---~~~~~~~~~~~~~~l~~~~~~~--~~~~g~~i~~~~~~---~~-v~~~~---~g 357 (417)
T 2ip4_A 290 LLPLLENDLVELALRVAEGRLAG---TRLSWKEGAAACVVLAAPGYPE--SPRKGIPLHVPEPP---EG-VLVFH---AG 357 (417)
T ss_dssp HTTTBCSCHHHHHHHHHHTCGGG---CCCCBCSSEEEEEEEECTTTTT--SCCCCCBCBCCCCC---TT-EEEEE---SS
T ss_pred HHHHhCCCHHHHHHHHHcCCCCc---CCccccCCcEEEEEEeCCCCCC--CCCCCCcccccCCC---CC-eEEEE---Cc
Confidence 34468999999999999997422 12332 3688888888775432 466776 6655433 45 76543 56
Q ss_pred CeeCCccCC------cceEEEEEe
Q 041518 414 DTVSMHYDP------MIANLWYGA 431 (765)
Q Consensus 414 ~~v~~~~d~------~~~~~i~~g 431 (765)
..++ +++ .+|+++++|
T Consensus 358 ~~~~--~~~~~~~~~rv~~v~~~g 379 (417)
T 2ip4_A 358 TRRE--GGRLVSAGGRVLNVVGLG 379 (417)
T ss_dssp EEES--SSSEEECSSEEEEEEEEE
T ss_pred eEee--CCeEEecCCcEEEEEEEc
Confidence 6653 233 469999888
No 31
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=100.00 E-value=1.3e-37 Score=342.80 Aligned_cols=337 Identities=14% Similarity=0.129 Sum_probs=224.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
||||||+|+|..+..++++++++|+++++++.+++ .+..+++|+.+..+ .+.+++ .++|+|+++
T Consensus 1 M~~Ililg~g~~~~~~~~a~~~~G~~v~~~~~~~~--~~~~~~~~~~~~~~------------~l~~~~--~~~d~v~~~ 64 (365)
T 2z04_A 1 MLTVGILGGGQLGWMTILEGRKLGFKFHVLEDKEN--APACRVADRCFRTG------------QISEFV--DSCDIITYE 64 (365)
T ss_dssp -CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSSS--CHHHHHSSEEECGG------------GHHHHH--HHCSEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC--CchhhhccceeeHH------------HHHHHh--hcCCEEEEC
Confidence 58999999999999999999999999998875543 35677888876421 577777 679999998
Q ss_pred CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecC
Q 041518 117 YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTH 196 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~ 196 (765)
++... ..+++.++. ++||+++++.+++||..+|++|+++|||+|++... . .+++.++++++|||+|+||..
T Consensus 65 ~e~~~--~~~~~~l~~----~~g~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~~--~-~~~~~~~~~~~~~P~vvKp~~ 135 (365)
T 2z04_A 65 FEHIK--DEVLEKCES----KLIPNPQALYVKKSRIREKLFLKKHGFPVPEFLVI--K-RDEIIDALKSFKLPVVIKAEK 135 (365)
T ss_dssp SSCCC--HHHHHHHTT----TBSSCTHHHHHHTCHHHHHHHHHTTTCCCCCEEEC-----------------CEEEECC-
T ss_pred CCCCc--HHHHHHHhh----hcCCCHHHHHHhhCHHHHHHHHHHcCCCCCCEEEE--c-HHHHHHHHHhcCCCEEEEEcC
Confidence 74332 234455543 67999999999999999999999999999998743 3 667778888899999999999
Q ss_pred CC-CCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccceeeee
Q 041518 197 GG-GGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQKIIE 275 (765)
Q Consensus 197 g~-Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k~~e 275 (765)
|+ ||+|++++++.+|+.++++.+. ++..+++|+||++++|+++.++.|++|+++.+...++ .++.+.....
T Consensus 136 ~~~~g~Gv~~v~~~~el~~~~~~~~-------~~~~~lvEe~i~~g~e~sv~~~~d~~G~~~~~~~~~~-~~~~~~~~~~ 207 (365)
T 2z04_A 136 LGYDGKGQYRIKKLEDANQVVKNHD-------KEESFIIEEFVKFEAEISCIGVRDREGKTYFYPQPFN-KHEEGILIYN 207 (365)
T ss_dssp ------------------------------------CEEEECCCCSEEEEEEEEECTTCCEEECCEEEE-EEETTEEEEE
T ss_pred CCcCCCCeEEECCHHHHHHHHHHhc-------cCCCEEEEccCCCCEEEEEEEEECCCCCEEEECCEEE-EEeCCEeEEE
Confidence 99 9999999999999999887654 2468999999997799999999988888776643332 2222333334
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcCC
Q 041518 276 EAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANGE 355 (765)
Q Consensus 276 ~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G~ 355 (765)
..|++ + .+++.+++.++++++||+|.+++||++++ +|++||+|+|||+++....+...+|+|+++.+++.++|.
T Consensus 208 ~~p~~-~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~~-~g~~~~iEiN~R~~~~~~~~~~~~~~~~~~~~~~~~~g~ 281 (365)
T 2z04_A 208 YVPYA-K----LKEAEEITKRLMELLDIVGVFTVEFFLLK-DGRVLINEFAPRVHNTGHWTLDGAYTSQFENLLRAITEM 281 (365)
T ss_dssp EEEEE-C----CHHHHHHHHHHHHHTTCCEEEEEEEEECT-TSCEEEEEEESSCCGGGTTHHHHBSSCHHHHHHHHHTTC
T ss_pred ECCHh-H----HHHHHHHHHHHHHHcCCEEEEEEEEEEeC-CCcEEEEEeccCcCCCceEEeeccccCHHHHHHHHHhCC
Confidence 56763 3 57889999999999999999999999997 788999999999985333366788999999999999999
Q ss_pred CCCCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEecccCCCeeCCccCCcceEEEEEe
Q 041518 356 PLPLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVEQGDTVSMHYDPMIANLWYGA 431 (765)
Q Consensus 356 ~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~~G~~v~~~~d~~~~~~i~~g 431 (765)
+++..+ . .+.++.++++++++. | +.+..+ .. .++ +++... |..+ ..+..+|+++++|
T Consensus 282 ~l~~~~--~--~~~~~~~~~~~~~~~----~--~~~~~~--~~-~~~-~~~~~~---g~~~--~~~~~lg~v~~~g 338 (365)
T 2z04_A 282 PLGSTE--L--KLPSGMVNILGKSYE----E--IPLKEI--LS-VEG-AKLYWY---GKEK--KPRRKVGHVNVVG 338 (365)
T ss_dssp CCCCCC--B--SSCEEEEEEESCCGG----G--SCHHHH--TT-STT-EEEEEC---CCCC--CTTCEEEEEEEEC
T ss_pred CCCCcc--c--cCCEEEEEEECCccc----c--chHHHH--hc-CCC-CEEEec---CCCC--CCCCeEEEEEEec
Confidence 987432 1 233668888887531 2 334332 12 345 655432 5532 3367899999998
No 32
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=100.00 E-value=2.6e-36 Score=373.45 Aligned_cols=341 Identities=18% Similarity=0.232 Sum_probs=268.5
Q ss_pred CCCEEEEEcCcHH-----------HHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHH
Q 041518 36 RIEKILIANRGEI-----------AYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDA 104 (765)
Q Consensus 36 ~~kkILI~g~G~~-----------a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~ 104 (765)
+.+||||+|+|.. +++++++|+++|+++++++++++..+.+...+|..+ +.+ .+.+.++++
T Consensus 558 ~~~kVlVlG~G~~riG~~~Efd~~~~~~~~al~~~G~~vi~v~~np~~~s~~~~~ad~~~-~~p-------~~~e~v~~i 629 (1073)
T 1a9x_A 558 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLY-FEP-------VTLEDVLEI 629 (1073)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEE-CCC-------CSHHHHHHH
T ss_pred cCcEEEEecCCccccccccccchhHHHHHHHHHhcCCEEEEEecCCcccccccccccEEE-ecc-------chhhhhhhh
Confidence 5679999999974 467899999999999999988887777777889877 333 678999999
Q ss_pred HHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHH
Q 041518 105 AIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAA 184 (765)
Q Consensus 105 a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~ 184 (765)
++.+++|+|++.++... ...++..+++.|++++|++++++.++.||..++++|+++|||+|++.... +.+++.++++
T Consensus 630 ~~~e~~d~Vi~~~g~~~-~~~la~~Le~~Gi~i~G~~~~ai~~~~DK~~~~~ll~~~GIp~P~~~~~~--s~eea~~~~~ 706 (1073)
T 1a9x_A 630 VRIEKPKGVIVQYGGQT-PLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVT--AIEMAVEKAK 706 (1073)
T ss_dssp HHHHCCSEEECSSSTHH-HHTTHHHHHHTTCCBCSSCHHHHHHHHSHHHHHHHHHHHTCCCCCEEECC--SHHHHHHHHH
T ss_pred hhhcCcceEEeecCCch-HHHHHHHHHHCCCCeeCCCHHHHHHhhCHHHHHHHHHHcCcCCCCceEEC--CHHHHHHHHH
Confidence 99999999999876421 13567888999999999999999999999999999999999999998655 9999999999
Q ss_pred HhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEe-ee
Q 041518 185 KIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYE-RD 263 (765)
Q Consensus 185 ~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~-r~ 263 (765)
++|||+||||..|+||+||++|+|.+|+.++++.+... +++.++|||+||+|.+|++++++.|+.+ ++...- ..
T Consensus 707 ~ig~PvvVKP~~~~gG~Gv~iv~~~~el~~~~~~a~~~----~~~~~vlvEefI~g~~E~~V~~l~d~~~-v~~~~i~e~ 781 (1073)
T 1a9x_A 707 EIGYPLVVRASYVLGGRAMEIVYDEADLRRYFQTAVSV----SNDAPVLLDHFLDDAVEVDVDAICDGEM-VLIGGIMEH 781 (1073)
T ss_dssp HHCSSEEEEC-------CEEEECSHHHHHHHHHHCC------------EEEBCCTTCEEEEEEEEECSSC-EEEEEEEEE
T ss_pred HcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHhh----CCCCcEEEEEccCCCcEEEEEEEEECCe-EEEEeeEEE
Confidence 99999999999999999999999999999998876432 2346899999999767999999998754 333221 11
Q ss_pred ccccccc-eeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCC
Q 041518 264 CSVQRRH-QKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQ 342 (765)
Q Consensus 264 ~s~~~~~-~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGv 342 (765)
......| .......|++.++++..+++.+++.++++++|++|++++||+++ +|++||||+|||+++++++++.++|+
T Consensus 782 ~~~~g~~~gd~~~~~P~~~l~~~~~~~i~~~a~~i~~aLg~~G~~~vdf~v~--~~~~~viEvNpR~~~~~~~~~~~tGi 859 (1073)
T 1a9x_A 782 IEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVK--NNEVYLIEVNPRAARTVPFVSKATGV 859 (1073)
T ss_dssp SSCTTSCGGGCCEEESCSSCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEC--SSCEEEEEEECSCCTTHHHHHHHHSC
T ss_pred EeccCCccCCceEEecCCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEEEEE--CCeEEEEEEECCCccHHHHHHHHHCc
Confidence 1100111 22334467768999999999999999999999999999999997 67899999999999888999999999
Q ss_pred CHHHHHHHHHcCCCCC---CCCCCcccceEEEEEEecc------cCCCCC-CCCCCcceeEEe
Q 041518 343 DLVEWQIRVANGEPLP---LSQSEVPLLGHAFEARIYA------ENVPKG-FLPATGVLHHYH 395 (765)
Q Consensus 343 Dl~~~~i~~a~G~~l~---~~~~~~~~~g~ai~~ri~a------e~p~~~-f~p~~G~i~~~~ 395 (765)
|++++++++++|.+++ +.+. ..+.++++.+++++ .||..+ +++++|.+..+.
T Consensus 860 ~l~~~~~~~~~G~~l~~~~~~~~-~~~~~~~vk~~~~~f~~~~~~d~~lg~~~~stGev~g~~ 921 (1073)
T 1a9x_A 860 PLAKVAARVMAGKSLAEQGVTKE-VIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVG 921 (1073)
T ss_dssp CHHHHHHHHHTTCCHHHHTCCSC-CCCSSEEEEEEECGGGGCTTSCCCCCSSCCCCEEEEEEE
T ss_pred CHHHHHHHHHcCCCchhcccCcC-cCCCeEEEEeccCCcccCCCCcCCCCCcccccCceEEec
Confidence 9999999999999874 2222 22378899998863 445444 677778666554
No 33
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=100.00 E-value=1.4e-35 Score=336.03 Aligned_cols=294 Identities=19% Similarity=0.254 Sum_probs=226.2
Q ss_pred CCEEEEEcCcHHHHHHHHHH-HHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIANRGEIAYRIMRTA-KRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraa-r~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
.+||||+|+|.....+++++ +++|++++++... ++ .....++ .+. -++.|.+.+++++++.++|+|++
T Consensus 21 ~~~iliiG~g~r~~a~a~~~~~~~g~~~v~~~~~-~~--~~~~~~~-~~~-------~~~~d~~~l~~~~~~~~~d~vi~ 89 (451)
T 2yrx_A 21 HMNVLVIGRGGREHAIAWKAAQSPLVGKLYVAPG-NP--GIADVAE-LVH-------IDELDIEALVQFAKQQAIDLTIV 89 (451)
T ss_dssp SEEEEEEECSHHHHHHHHHHHTCTTEEEEEEEEC-CT--TGGGTSE-ECC-------CCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECC-Ch--hhhhhCc-eec-------cCCCCHHHHHHHHHHcCCCEEEE
Confidence 36999999996555555544 5689998777543 32 2334444 221 24688999999999999999999
Q ss_pred CCCcccccH---HHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEE
Q 041518 116 GYGFLSESA---DFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILI 192 (765)
Q Consensus 116 g~g~lsE~~---~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVV 192 (765)
+. |+. .+++.+++.|++++||+++++++++||..+|++|+++|||+|++.... +.+++.+++++++||+||
T Consensus 90 ~~----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~--~~~~~~~~~~~~~~PvVv 163 (451)
T 2yrx_A 90 GP----EAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFT--SYEEAKAYIEQKGAPIVI 163 (451)
T ss_dssp CS----HHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEEES--CHHHHHHHHHHHCSSEEE
T ss_pred CC----chHHHHHHHHHHHHCCCCEeCccHHHHHHhhCHHHHHHHHHHcCCCCCCeEEEC--CHHHHHHHHHhcCCcEEE
Confidence 74 443 457778899999999999999999999999999999999999987655 899999999999999999
Q ss_pred eecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCC--CCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccc
Q 041518 193 KPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFG--INTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRH 270 (765)
Q Consensus 193 KP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg--~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~ 270 (765)
||..|+||+||++++|.+|+.++++.+... ..|+ ...++||+||+ ++|+++.++.|+ +.+... ...+++
T Consensus 164 Kp~~~~gg~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-G~E~sv~~~~dG--~~~~~~----~~~~~~ 234 (451)
T 2yrx_A 164 KADGLAAGKGVTVAQTVEEALAAAKAALVD--GQFGTAGSQVVIEEYLE-GEEFSFMAFVNG--EKVYPL----AIAQDH 234 (451)
T ss_dssp EECC----CCEEEESSHHHHHHHHHHHHHH--SCCBTTBCCEEEEECCC-SEEEEEEEEEET--TEEEEC----CCBEEC
T ss_pred EeCCCCCCCcEEEECCHHHHHHHHHHHHhc--cccCCCCCeEEEEECCc-CcEEEEEEEEcC--CEEEEe----eeEEec
Confidence 999999999999999999999999887652 2344 36899999999 689999999864 433332 111222
Q ss_pred eee------------eeecCCCCCCHHHHHHH-HHHHHHHHHHc-----CCCceeEEEEEEECCCCcEEEEEecccCCcc
Q 041518 271 QKI------------IEEAPAPNVTHDFRALL-GQAAVSAAKAV-----SYHNAGTVEFIVDTVSDQFYFMEMNTRLQVE 332 (765)
Q Consensus 271 ~k~------------~e~~Pa~~l~~~~~~~l-~~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~ 332 (765)
++. ....|++.+++++.+++ .+++.++++++ +|.|++++||++++ +| +||||+|||+++.
T Consensus 235 ~~~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~ve~~~~~-~g-~~viEiN~R~g~~ 312 (451)
T 2yrx_A 235 KRAYDGDEGPNTGGMGAYSPVPQISDEMMDAALEAILRPAAKALAAEGRPFLGVLYAGLMATA-NG-PKVIEFNARFGDP 312 (451)
T ss_dssp CEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEET-TE-EEEEEEESSCCTT
T ss_pred cccccCCCCCCCCCCeEEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeC-CC-cEEEEEecCCCCc
Confidence 221 23468756899988888 66777777665 67799999999997 66 9999999999743
Q ss_pred c-cccceecCCCHHHHHHHHHcCCCCC
Q 041518 333 H-PVTEMIVDQDLVEWQIRVANGEPLP 358 (765)
Q Consensus 333 ~-~~~e~~tGvDl~~~~i~~a~G~~l~ 358 (765)
. ......+|+|+.+++++++.|...+
T Consensus 313 ~~~~i~~~~g~d~~~~~~~~~~g~~~~ 339 (451)
T 2yrx_A 313 EAQVVLPRLKTDLVEAVLAVMDGKELE 339 (451)
T ss_dssp HHHHHGGGBCSCHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHcCCCHHHHHHHHhcCCCCC
Confidence 3 2345568999999999999997653
No 34
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=100.00 E-value=2.1e-36 Score=338.73 Aligned_cols=352 Identities=15% Similarity=0.107 Sum_probs=254.4
Q ss_pred CCCEEEEEcCcHHHHHHHHH-HHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIANRGEIAYRIMRT-AKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iira-ar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+.+||||+|+|.....++.+ ++++| +++++.. .+....+|+. + |.+.|++++++.++|+|+
T Consensus 14 ~~~~vlviG~Ggr~~a~a~~~a~~~g-~v~~~~~-----np~~~~~d~~--i----------d~~~l~~~~~~~~~d~V~ 75 (412)
T 1vkz_A 14 KAVRVHILGSGGREHAIGWAFAKQGY-EVHFYPG-----NAGTKRDGTN--H----------PYEGEKTLKAIPEEDIVI 75 (412)
T ss_dssp --CEEEEEECSHHHHHHHHHHHHTTC-EEEEEEC-----CTTGGGTSEE--C----------CCCTHHHHHTSCSSCEEC
T ss_pred ccCEEEEECCCHHHHHHHHHHHhCCC-CEEEECC-----Chhhhccccc--C----------CHHHHHHHHHHcCCCEEE
Confidence 34599999998554444444 57899 8887732 2455677764 2 347799999999999999
Q ss_pred eCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEee
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKP 194 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP 194 (765)
++ +|++.++.+++.++. ++||+++++.+++||..+|++|+++|||+|++.... +.+++.++++++|||+||||
T Consensus 76 ~~----~E~~~~a~~~~~l~~-~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~--~~~e~~~~~~~~g~PvvvKp 148 (412)
T 1vkz_A 76 PG----SEEFLVEGVSNWRSN-VFGPVKEVARLEGSKVYAKRFMKKYGIRTARFEVAE--TPEELREKIKKFSPPYVIKA 148 (412)
T ss_dssp CS----SGGGTCC-----CTT-BSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEES--SHHHHHHHHTTSCSSEEEEE
T ss_pred EC----CcHHHHHHHHHHhhh-hhCCCHHHHHHhcCHHHHHHHHHHcCCCCCCEEEEC--CHHHHHHHHHhcCCCEEEEe
Confidence 86 366656677888887 789999999999999999999999999999987655 89999999999999999999
Q ss_pred cCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCC-CcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccc---
Q 041518 195 THGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGI-NTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRH--- 270 (765)
Q Consensus 195 ~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~-~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~--- 270 (765)
..|+||+||++++|.+|+.++++.+...+. .|++ +.++||+||+ ++|++++++.|++ .++.+. ..+..++.+
T Consensus 149 ~~~~gg~Gv~~v~~~~el~~a~~~~~~~~~-~~g~~~~vlvEe~i~-G~E~sv~~~~dg~-~~~~~~-~~~~~~~~~~~~ 224 (412)
T 1vkz_A 149 DGLARGKGVLILDSKEETIEKGSKLIIGEL-IKGVKGPVVIDEFLA-GNELSAMAVVNGR-NFVILP-FVRDYKRLMDGD 224 (412)
T ss_dssp SSCCSSCCEEEESSHHHHHHHHHHHHHTSS-STTCCSCEEEEECCC-SEEEEEEEEEETT-EEEECC-CCEECCEEETTT
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHhhcc-ccCCCCeEEEEECCc-CcEEEEEEEECCC-EEEEee-eeEeeeeccCCC
Confidence 999999999999999999999988764310 3443 5899999999 6999999998754 333332 111122111
Q ss_pred -----eeeeeecCCCCCCHHHHHHHHHHHHHHHHHc-----CCCceeEEEEEEECCCCcEEEEEecccCCc-ccccccee
Q 041518 271 -----QKIIEEAPAPNVTHDFRALLGQAAVSAAKAV-----SYHNAGTVEFIVDTVSDQFYFMEMNTRLQV-EHPVTEMI 339 (765)
Q Consensus 271 -----~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiN~R~~~-~~~~~e~~ 339 (765)
.......|++ +++++.+++.+++.+++++| +|.|++++||++++ +| +||||+|||+++ +++.++..
T Consensus 225 ~~~~~g~~~~~~P~~-l~~~~~~~i~~~a~~~~~~l~~~g~~~~G~~~ve~~~~~-~g-~~viEiN~R~g~~~~~~~~~~ 301 (412)
T 1vkz_A 225 RGPNTGGMGSWGPVE-IPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLGLMLHD-GD-PYILEYNVRLGDPETEVIVTL 301 (412)
T ss_dssp EEEECSCSEEEECCC-CCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEET-TE-EEEEEEESSCCTTHHHHHHHH
T ss_pred CCCCCCCceEEECCC-CCHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEEEC-CC-cEEEEEecCCCCCcceeehhh
Confidence 1123567986 99999999999999999999 88899999999997 66 999999999984 44456666
Q ss_pred cCCCHHHHHHHHHcCCCCCCCCCCcccceEEEEEEecccCCCCCCCCCCcceeEEeeCCCCCCcEEEEeccc-CCCeeCC
Q 041518 340 VDQDLVEWQIRVANGEPLPLSQSEVPLLGHAFEARIYAENVPKGFLPATGVLHHYHPVPVSSKAVRVETGVE-QGDTVSM 418 (765)
Q Consensus 340 tGvDl~~~~i~~a~G~~l~~~~~~~~~~g~ai~~ri~ae~p~~~f~p~~G~i~~~~~p~~~~~~vrv~~~v~-~G~~v~~ 418 (765)
+|+|+.+++++++.|...+. ... .++++ +++++.++. .+.|.+|.+..+..| + . ++. .+.. .|..+..
T Consensus 302 ~g~d~~~~~~~~~~g~l~~~---~~~-~~~a~-~~~l~~~~~-~~~~~~g~~i~l~~~--~-~-v~~-~g~~~~~~~~~~ 370 (412)
T 1vkz_A 302 NPEGFVNAVLEGYRGGKMEP---VEP-RGFAV-DVVLAARGY-PDAPEKGKEITLPEE--G-L-IFF-AGVAEKDGKLVT 370 (412)
T ss_dssp CHHHHHHHHHHHHHTSCCCC---CCC-CSEEE-EEEEECTTT-TTSCCCCCBCBCCSS--C-C-EEE-SSEEEETTEEEE
T ss_pred cCCCHHHHHHHHhcCCCccc---ccc-CCeEE-EEEEecCCC-CCCCCCCCEeeeCCC--C-c-EEE-CcccccCCeEEe
Confidence 89999999999998864321 111 24554 566665422 234667764433333 2 2 432 2221 1222222
Q ss_pred ccCCcceEEEEEe
Q 041518 419 HYDPMIANLWYGA 431 (765)
Q Consensus 419 ~~d~~~~~~i~~g 431 (765)
...++|+++++|
T Consensus 371 -~~~~vg~v~~~g 382 (412)
T 1vkz_A 371 -NGGRVLHCMGTG 382 (412)
T ss_dssp -CSSEEEEEEEEE
T ss_pred -CCCcEEEEEEeC
Confidence 246799999998
No 35
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=100.00 E-value=1.9e-35 Score=333.68 Aligned_cols=305 Identities=14% Similarity=0.164 Sum_probs=239.7
Q ss_pred CCCcCCCCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhC
Q 041518 31 DDKQQRIEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTG 109 (765)
Q Consensus 31 ~~~~~~~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~ 109 (765)
.+..+|..||||+|+|.-...+++++++. ++..+.+.. ..+....+++.+.+ ++.|.+.|++++++++
T Consensus 15 ~~~~p~~m~ilvlG~ggre~ala~~l~~s~~v~~v~~~p----gn~g~~~~~~~~~i-------~~~d~~~l~~~a~~~~ 83 (442)
T 3lp8_A 15 QTQGPGSMNVLVIGSGGREHSMLHHIRKSTLLNKLFIAP----GREGMSGLADIIDI-------DINSTIEVIQVCKKEK 83 (442)
T ss_dssp -----CCEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEE----CCGGGTTTSEECCC-------CTTCHHHHHHHHHHTT
T ss_pred ccCCCCCCEEEEECCChHHHHHHHHHHhCCCCCEEEEEC----CChHHhhccceeec-------CcCCHHHHHHHHHHhC
Confidence 34445567999999997777788888877 455554432 12344455554433 4689999999999999
Q ss_pred CCEEEeCCCcccccH---HHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHh
Q 041518 110 AQAIHPGYGFLSESA---DFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKI 186 (765)
Q Consensus 110 ~DaV~pg~g~lsE~~---~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~i 186 (765)
+|+|+++. |++ .+++.+++.|++++||+++++++++||..+|++|+++|||+|++.... +.+++.++++++
T Consensus 84 id~vv~g~----E~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIp~p~~~~~~--~~~ea~~~~~~~ 157 (442)
T 3lp8_A 84 IELVVIGP----ETPLMNGLSDALTEEGILVFGPSKAAARLESSKGFTKELCMRYGIPTAKYGYFV--DTNSAYKFIDKH 157 (442)
T ss_dssp CCEEEECS----HHHHHTTHHHHHHHTTCEEESCCHHHHHHHHCHHHHHHHHHHHTCCBCCEEEES--SHHHHHHHHHHS
T ss_pred CCEEEECC----cHHHHHHHHHHHHhcCCcEecCCHHHHHHhhCHHHHHHHHHHCCCCCCCEEEEC--CHHHHHHHHHHc
Confidence 99999974 554 367889999999999999999999999999999999999999987665 899999999999
Q ss_pred CCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCC--CCcEEEecccCCCeeEEEEEEEeccccEEEEEe-ee
Q 041518 187 GYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFG--INTILLEKYITQPRHIEVQIFGDKYGKVLHLYE-RD 263 (765)
Q Consensus 187 g~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg--~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~-r~ 263 (765)
|||+||||..++||+||++++|.+|+.++++.+.. ...|+ ...++|||||+ |+|+++.++.|++ +++.+.. ++
T Consensus 158 g~PvVvKp~~~~gg~GV~iv~~~eel~~a~~~~~~--~~~~g~~~~~vlvEe~i~-G~E~sv~~~~dg~-~~~~~~~~~~ 233 (442)
T 3lp8_A 158 KLPLVVKADGLAQGKGTVICHTHEEAYNAVDAMLV--HHKFGEAGCAIIIEEFLE-GKEISFFTLVDGS-NPVILGVAQD 233 (442)
T ss_dssp CSSEEEEESSCCTTTSEEEESSHHHHHHHHHHHHT--SCTTGGGGSSEEEEECCC-SEEEEEEEEEESS-CEEEEEEEEE
T ss_pred CCcEEEeECCCCCCCeEEEeCCHHHHHHHHHHHHh--hcccCCCCCeEEEEEeec-CcEEEEEEEECCC-eEEEeEEeEe
Confidence 99999999999999999999999999999988763 11243 36899999999 6999999998865 4544432 11
Q ss_pred cc-ccccc-----eeeeeecCCCCCCHHHHHHHHHH----HHHHHHHcCC--CceeEEEEEEECCCCcEEEEEecccCC-
Q 041518 264 CS-VQRRH-----QKIIEEAPAPNVTHDFRALLGQA----AVSAAKAVSY--HNAGTVEFIVDTVSDQFYFMEMNTRLQ- 330 (765)
Q Consensus 264 ~s-~~~~~-----~k~~e~~Pa~~l~~~~~~~l~~~----a~~i~~alg~--~G~~~vEf~~~~~~g~~~~iEiN~R~~- 330 (765)
.. ..... .......|++.++++..+++.+. +.++++++|+ +|++++||++++ +| +||||+|+|++
T Consensus 234 ~~~~~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~a~~~~~a~g~~~~G~~~ve~~~~~-~g-~~viEiN~R~g~ 311 (442)
T 3lp8_A 234 YKTIGDNNKGPNTGGMGSYSKPNIITQEMEHIIIQKIIYPTIKAMFNMNIQFRGLLFAGIIIKK-NE-PKLLEYNVRFGD 311 (442)
T ss_dssp CCEEEGGGEEEECSCSEEEECTTSSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEET-TE-EEEEEEESSCCT
T ss_pred eeecccCCCCCCCCCcEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEEeC-CC-eEEEEEecCCCC
Confidence 11 10000 11234568877999999999987 8888899888 699999999996 55 99999999998
Q ss_pred ccccccceecCCCHHHHHHHHHcCCCCC
Q 041518 331 VEHPVTEMIVDQDLVEWQIRVANGEPLP 358 (765)
Q Consensus 331 ~~~~~~e~~tGvDl~~~~i~~a~G~~l~ 358 (765)
.++..+...+|.||++++++++.|+..+
T Consensus 312 ~~~~~~~~~~~~dl~~~~~~~~~G~l~~ 339 (442)
T 3lp8_A 312 PETQSILPRLNSDFLKLLSLTAKGKLGN 339 (442)
T ss_dssp THHHHHGGGBCSCHHHHHHHHHHTCCSS
T ss_pred CchhhhHHHhCCCHHHHHHHHHcCCCCC
Confidence 4456666678999999999999997543
No 36
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=100.00 E-value=1.6e-35 Score=332.52 Aligned_cols=291 Identities=18% Similarity=0.238 Sum_probs=228.9
Q ss_pred EEEEEcCcHHHHHHHHHH-HHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC
Q 041518 39 KILIANRGEIAYRIMRTA-KRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY 117 (765)
Q Consensus 39 kILI~g~G~~a~~iiraa-r~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~ 117 (765)
||||+|+|.....+++++ +++|+++++++.. ++ ....++| . +. -++.|.+.++++++++++|+|+++.
T Consensus 2 ~ililG~g~r~~~~a~~~~~~~g~~~v~~~~~-~~--~~~~~~~-~--~~-----~~~~d~~~l~~~~~~~~~d~v~~~~ 70 (422)
T 2xcl_A 2 NVLIIGKGGREHTLAWKAAQSSLVENVFAAPG-ND--GMAASAQ-L--VN-----IEESDHAGLVSFAKQNQVGLTIVGP 70 (422)
T ss_dssp EEEEEECSHHHHHHHHHHTTCTTCSEEEEEEC-CG--GGTTTCE-E--CC-----CCTTCHHHHHHHHHHTTEEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEeCC-Ch--hhhhhcc-c--cc-----cCcCCHHHHHHHHHHcCCCEEEECC
Confidence 799999996656666655 4589998887643 22 2344555 2 21 2568999999999999999999874
Q ss_pred CcccccH---HHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEee
Q 041518 118 GFLSESA---DFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKP 194 (765)
Q Consensus 118 g~lsE~~---~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP 194 (765)
|+. .+++.+++.|++++||+++++++++||..+|++|+++|||+|++.... +.+++.+++++++||+||||
T Consensus 71 ----E~~~~~~~~~~l~~~gi~~~g~~~~~~~~~~dK~~~k~~l~~~gip~p~~~~~~--~~~~~~~~~~~~~~P~vvKp 144 (422)
T 2xcl_A 71 ----EVPLIEGLVDEFEKAGLHVFGPSKAAAIIEGSKQFAKDLMKKYDIPTAEYETFT--SFDEAKAYVQEKGAPIVIKA 144 (422)
T ss_dssp ----HHHHHTTHHHHHHHTTCCEESCCTTTTHHHHCHHHHHHHHHHTTCCBCCEEEES--CHHHHHHHHHHHCSSEEEEE
T ss_pred ----cHHHHHHHHHHHHHCCCCEECcCHHHHHHhcCHHHHHHHHHHcCCCCCCeEEEC--CHHHHHHHHHhcCCCEEEEe
Confidence 544 456778899999999999999999999999999999999999987655 89999999999999999999
Q ss_pred cCCCCCccEEEECChhHHHHHHHHHHHHHHhcCC--CCcEEEecccCCCeeEEEEEEEeccccEEEEEeeecccccccee
Q 041518 195 THGGGGKGMRIVQSPNDFVDSFLGAQREAAASFG--INTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRHQK 272 (765)
Q Consensus 195 ~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg--~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~~k 272 (765)
..|+||+|++++++.+|+.++++.+... ..|+ ...++||+||+ ++|+++.++.|++ .+... ...+++++
T Consensus 145 ~~~~~g~Gv~~v~~~~el~~~~~~~~~~--~~~g~~~~~~lvEe~i~-g~E~sv~~~~dG~--~~~~~----~~~~~~~~ 215 (422)
T 2xcl_A 145 DGLAAGKGVTVAMTEEEAIACLHDFLED--EKFGDASASVVIEEYLS-GEEFSLMAFVKGE--KVYPM----VIAQDHKR 215 (422)
T ss_dssp SSCGGGTCEEEESSHHHHHHHHHHHHTS--CTTGGGGSSEEEEECCC-SEEEEEEEEEETT--EEEEC----CCBEEEEE
T ss_pred CCCCCCCcEEEECCHHHHHHHHHHHHhh--hhccCCCCeEEEEECCc-CcEEEEEEEEcCC--EEEec----ceeeeeeh
Confidence 9999999999999999999999877541 1233 36899999999 6899999998643 33321 11111211
Q ss_pred ------------eeeecCCCCCCHHHHHHHH-HHHHHHHHHc-----CCCceeEEEEEEECCCCcEEEEEecccCCccc-
Q 041518 273 ------------IIEEAPAPNVTHDFRALLG-QAAVSAAKAV-----SYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEH- 333 (765)
Q Consensus 273 ------------~~e~~Pa~~l~~~~~~~l~-~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~- 333 (765)
.....|++.++++..+++. +++.++++++ +|.|++++||++++ +| +||+|+|||+++..
T Consensus 216 ~~~~~~~~~~g~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~G~~~vd~~~~~-~g-~~viEiN~R~g~~~~ 293 (422)
T 2xcl_A 216 AFDGDKGPNTGGMGAYSPVPQISEETVRHAVETIVKPAAKAMVQEGRSFTGVLYAGLMLTE-NG-SKVIEFNARFGDPET 293 (422)
T ss_dssp EEGGGEEEEEEEEEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEEET-TE-EEEEEEESSCCTTTH
T ss_pred hcCCCCCCCCCCCeeEccCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeeEEEeC-CC-cEEEEEecCCCCcHH
Confidence 1234688558999888885 4777777665 67799999999997 66 99999999998433
Q ss_pred cccceecCCCHHHHHHHHHcCCCC
Q 041518 334 PVTEMIVDQDLVEWQIRVANGEPL 357 (765)
Q Consensus 334 ~~~e~~tGvDl~~~~i~~a~G~~l 357 (765)
......+|+|+.+++++++.|...
T Consensus 294 ~~i~~~~g~d~~~~~~~~~~g~l~ 317 (422)
T 2xcl_A 294 QVVLPRMESDLVQVLLDLLDDKEV 317 (422)
T ss_dssp HHHGGGBCSCHHHHHHHHHTTCCC
T ss_pred HHHHHhcCCCHHHHHHHHHcCCcC
Confidence 234557899999999999999754
No 37
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=100.00 E-value=5.9e-35 Score=328.67 Aligned_cols=319 Identities=19% Similarity=0.231 Sum_probs=243.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCC-eEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGI-RTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi-~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
|.||||+|+|.-...+++++++.+. ..+.+. ..++ .....++ ...+. -++.|.+.|+++++++++|+|++
T Consensus 3 ~mkvlviG~ggre~ala~~l~~s~~v~~v~~~-pgn~--g~~~~~~-~~~~~-----~~~~d~~~l~~~a~~~~id~vv~ 73 (431)
T 3mjf_A 3 AMNILIIGNGGREHALGWKAAQSPLADKIYVA-PGNA--GTALEPT-LENVD-----IAATDIAGLLAFAQSHDIGLTIV 73 (431)
T ss_dssp CEEEEEEECSHHHHHHHHHHTTCTTEEEEEEE-ECCH--HHHHCTT-CEECC-----CCTTCHHHHHHHHHHTTEEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCCEEEEE-CCCH--HHhhhcc-cceec-----CCcCCHHHHHHHHHHhCcCEEEE
Confidence 3589999999776678888888763 333332 2222 1222232 11121 24589999999999999999999
Q ss_pred CCCcccccH---HHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEE
Q 041518 116 GYGFLSESA---DFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILI 192 (765)
Q Consensus 116 g~g~lsE~~---~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVV 192 (765)
++ |.+ .+++.+++.|++++||+++++++++||..+|++|+++|||+|++.... +.+++.++++++|||+||
T Consensus 74 g~----e~~l~~~~~~~l~~~Gi~~~Gp~~~a~~~~~dK~~~k~~l~~~GIptp~~~~~~--~~~ea~~~~~~~g~PvVv 147 (431)
T 3mjf_A 74 GP----EAPLVIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQNFT--DVEAALAYVRQKGAPIVI 147 (431)
T ss_dssp CS----HHHHHTTHHHHHHHTTCCEESCCHHHHHHHHCHHHHHHHHHHTTCSBCCEEEES--CHHHHHHHHHHHCSSEEE
T ss_pred CC----chHHHHHHHHHHHhcCCCeeCCCHHHHHHhhCHHHHHHHHHHcCCCCCCeEeeC--CHHHHHHHHHHcCCeEEE
Confidence 85 433 468899999999999999999999999999999999999999987665 899999999999999999
Q ss_pred eecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCC--CCcEEEecccCCCeeEEEEEEEeccccEEEEEeeeccccccc
Q 041518 193 KPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFG--INTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQRRH 270 (765)
Q Consensus 193 KP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg--~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~~~~ 270 (765)
||..++||+||++++|.+|+.++++.+... ..|+ ...++|||||+ |+|+++.++.|++ +++.+.. .++|
T Consensus 148 Kp~~~~gg~GV~iv~~~~el~~a~~~~~~~--~~~g~~~~~vlvEe~i~-G~E~sv~~~~dg~-~~~~~~~-----~~~~ 218 (431)
T 3mjf_A 148 KADGLAAGKGVIVAMTQEEAETAVNDMLAG--NAFGDAGHRIVVEEFLD-GEEASFIVMVDGE-NVLPMAT-----SQDH 218 (431)
T ss_dssp EESSSCTTCSEEEECSHHHHHHHHHHHHTT--HHHHCCCCCEEEEECCC-SEEEEEEEEEESS-CEEECCC-----BEEC
T ss_pred EECCCCCCCcEEEeCCHHHHHHHHHHHHhh--ccccCCCCeEEEEEeeC-CcEEEEEEEEcCC-EEEEEEe-----eEec
Confidence 999999999999999999999999887632 1233 35899999999 5999999998875 6665532 2223
Q ss_pred eee------------eeecCCCCCCHHHHHHHHHH----HHHHHHHcCC--CceeEEEEEEECCCCcEEEEEecccCCcc
Q 041518 271 QKI------------IEEAPAPNVTHDFRALLGQA----AVSAAKAVSY--HNAGTVEFIVDTVSDQFYFMEMNTRLQVE 332 (765)
Q Consensus 271 ~k~------------~e~~Pa~~l~~~~~~~l~~~----a~~i~~alg~--~G~~~vEf~~~~~~g~~~~iEiN~R~~~~ 332 (765)
++. ....|++.++++..+++.+. +.++++++|+ +|++++||++++ +|++||||+|+|++
T Consensus 219 ~~~~~~~~g~~~gg~g~~~P~~~l~~~~~~~i~~~i~~~~~~~~~~~g~~~~G~~~ve~~~~~-~g~~~viEiN~R~G-- 295 (431)
T 3mjf_A 219 KRVGDGDTGPNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMISA-DGQPKVIEFNCRFG-- 295 (431)
T ss_dssp CEEETTTEEEECSCSEEEESCTTSCHHHHHHHHHHTHHHHHHHHHHTTCCCEEEEEEEEEECT-TSCEEEEEECGGGS--
T ss_pred eecccCCCCCCCCCceEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEEEeC-CCCeEEEEEecCCC--
Confidence 322 23568877999999998876 6777777666 799999999997 77899999999995
Q ss_pred ccccc---eecCCCHHHHHHHHHcCCCCCC--CCCCcccceEEEEEEecccCCCC
Q 041518 333 HPVTE---MIVDQDLVEWQIRVANGEPLPL--SQSEVPLLGHAFEARIYAENVPK 382 (765)
Q Consensus 333 ~~~~e---~~tGvDl~~~~i~~a~G~~l~~--~~~~~~~~g~ai~~ri~ae~p~~ 382 (765)
+|.++ ..+|+||++++++++.|+..+. ...+-...+..+++..||+++..
T Consensus 296 ~~~~~~i~~~~g~dl~~~~~~~~~G~l~~~~~~~~~~~a~~vv~a~~gyp~~~~~ 350 (431)
T 3mjf_A 296 DPETQPIMLRMRSDLVELCLAGTQGKLNEKTSDWDERPSLGVVLAAGGYPADYRQ 350 (431)
T ss_dssp TTTHHHHHHHBCSCHHHHHHHHHTTCGGGCCCCBCSSCEEEEEEEETTTTSCCCC
T ss_pred CcHHHHHHHHHCCCHHHHHHHHHcCCCCCCCccccCCcEEEEEecCCCcCccCCC
Confidence 67666 5789999999999999985332 11111112223345556665543
No 38
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=100.00 E-value=1.4e-36 Score=333.92 Aligned_cols=304 Identities=16% Similarity=0.174 Sum_probs=227.1
Q ss_pred CCEEEEEcCc-----HH----HHHHHHHHHHCCCeEEEEecCCCCCCcccccccEE---------------EEcCCCCcC
Q 041518 37 IEKILIANRG-----EI----AYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEA---------------IRIGPPPAR 92 (765)
Q Consensus 37 ~kkILI~g~G-----~~----a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~---------------~~i~~~~~~ 92 (765)
.|||.|+-+| ++ |..+++++++.||+++.|+.+.+..+.+....++. ..+......
T Consensus 3 kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (357)
T 4fu0_A 3 NKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGITRSGEWYHYTGEKEKILNNTWFEDSKNLCPVVVSQNRSV 82 (357)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTCCEEEECSCTHHHHTTCGGGCGGGEEEEEECCCTTT
T ss_pred CCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEEeCCCceeecCCCHHHhhcCcchhhhhccccccccccccc
Confidence 3688777444 22 56689999999999999988776543322111111 111111100
Q ss_pred cCCCCHHHHHHHHHHhCCCEEEeC-CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCcccc
Q 041518 93 LSYLNGSSIVDAAIRTGAQAIHPG-YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHG 171 (765)
Q Consensus 93 ~syld~~~Il~~a~~~~~DaV~pg-~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~ 171 (765)
..+ .+...+..+..++|+|+|. +|+++|+..++.+|+.+|+||+|+++.++.++.||..+|++++++|||+|++...
T Consensus 83 ~~~--~~~~~~~~~~~~~D~vf~~l~G~~gEdg~~q~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~ 160 (357)
T 4fu0_A 83 KGF--LEIASDKYRIIKVDLVFPVLHGKNGEDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKSVTF 160 (357)
T ss_dssp CEE--EEC----CEEEECSEEEECCCSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCBCCCEEEE
T ss_pred cch--hhhhhhhHhhcCCCEEEECCcCccccCHHHHHHHHHCCCcEECcCHHHHHHHhCHHHHHHHHHHCCCCCCCEEee
Confidence 000 1223334455679999998 7999999999999999999999999999999999999999999999999998765
Q ss_pred CCCC-HHHHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEE
Q 041518 172 NEQD-IDLMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFG 250 (765)
Q Consensus 172 ~~~s-~~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~ 250 (765)
...+ ..++.++++.+|||+||||+.|+||+||++|++.+||.++++.+.. .+..+++|+||+ |+|+++++++
T Consensus 161 ~~~~~~~~~~~~~~~lg~PvvVKP~~gg~s~Gv~~v~~~~el~~~~~~a~~------~~~~vlvE~~i~-G~e~~v~vl~ 233 (357)
T 4fu0_A 161 KRFNEEAAMKEIEANLTYPLFIKPVRAGSSFGITKVIEKQELDAAIELAFE------HDTEVIVEETIN-GFEVGCAVLG 233 (357)
T ss_dssp EGGGHHHHHHHHHHHCCSSEEEEETTCSSSTTCEEESSHHHHHHHHHHHTT------TCSEEEEEECCC-SEEEEEEEEE
T ss_pred cCCChHHHHHHHHHhcCCCEEEEECCCCCCCceEEeccHHhHHHHHHHHhc------cCCeEEEEEecC-CEEEEEEEEe
Confidence 4222 3345567789999999999999999999999999999999887653 267999999999 6999999998
Q ss_pred eccccEEEEEe--eeccccccceee-----eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEE
Q 041518 251 DKYGKVLHLYE--RDCSVQRRHQKI-----IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFM 323 (765)
Q Consensus 251 d~~g~vv~l~~--r~~s~~~~~~k~-----~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~i 323 (765)
++.+.+..+.+ ..+.++++.+|. ....|+ .++++..+++.++|.+++++||++|+++|||++++ +|++||+
T Consensus 234 ~~~~~~~~v~~~~~~~~~~d~~~k~~~~~~~~~~pa-~l~~~~~~~i~~~A~~~~~aLg~~G~~~VDf~~~~-dg~~~vl 311 (357)
T 4fu0_A 234 IDELIVGRVDEIELSSGFFDYTEKYTLKSSKIYMPA-RIDAEAEKRIQEAAVTIYKALGCSGFSRVDMFYTP-SGEIVFN 311 (357)
T ss_dssp SSSEEECCCEEEEECHHHHTSCSBCSSCCEEEESSC-SCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT-TCCEEEE
T ss_pred cCCceEEEEEEEEcccccccccccccCCCceEecCC-CCCHHHHHHHHHHHHHHHHHhCCcceEEEEEEEeC-CCCEEEE
Confidence 87654433332 334444444433 233577 79999999999999999999999999999999997 8899999
Q ss_pred EecccCCcc-c---cccceecCCCHHHHHHHH
Q 041518 324 EMNTRLQVE-H---PVTEMIVDQDLVEWQIRV 351 (765)
Q Consensus 324 EiN~R~~~~-~---~~~e~~tGvDl~~~~i~~ 351 (765)
|||||++.. + |..-..+|+|+.++.-++
T Consensus 312 EvNt~PG~t~~S~~p~~~~~~G~~~~~li~~l 343 (357)
T 4fu0_A 312 EVNTIPGFTSHSRYPNMMKGIGLSFSQMLDKL 343 (357)
T ss_dssp EEESSCCCSTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred EEeCCCCCCcccHHHHHHHHhCcCHHHHHHHH
Confidence 999999832 2 333346799877654443
No 39
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=100.00 E-value=1.3e-34 Score=314.21 Aligned_cols=294 Identities=13% Similarity=0.120 Sum_probs=212.0
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHC-C-CeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 35 QRIEKILIANRGEIAYRIMRTAKRL-G-IRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 35 ~~~kkILI~g~G~~a~~iiraar~~-G-i~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
||.+||||+|+|.. ..+++++++. | +++++++.+++ ++...++|+.+.++.. ++..+.+.++++++++++|+
T Consensus 2 m~~~~Ili~g~g~~-~~l~~~l~~~~~~~~v~~~d~~~~--~~~~~~~d~~~~~~~~---~~~~~~~~l~~~~~~~~~d~ 75 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-AKLVEYFVKEFKTGRVSTADCSPL--ASALYMADQHYIVPKI---DEVEYIDHLLTLCQDEGVTA 75 (331)
T ss_dssp TTCCEEEEESCTTC-HHHHHHHHHHCCSSEEEEEESCTT--CGGGGGSSSEEECCCT---TSTTHHHHHHHHHHHHTCCE
T ss_pred CccceEEEecCCch-HHHHHHHHHhcCCCEEEEEeCCCc--chhHHhhhceecCCCC---CChhHHHHHHHHHHHcCCCE
Confidence 34569999998865 4578888875 7 89988876544 4566789998876531 12234789999999999999
Q ss_pred EEeCCCcccc-cHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHH--HHhCCc
Q 041518 113 IHPGYGFLSE-SADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEA--AKIGYP 189 (765)
Q Consensus 113 V~pg~g~lsE-~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~--~~ig~P 189 (765)
|+|+.+.... .+.+++.++..|++++||+++++..++||..++++++++|||+|+++. +.+++.+++ +.++||
T Consensus 76 vi~~~~~~~~~~a~~~~~l~~~g~~~~~~~~~~~~~~~dK~~~~~~l~~~gip~p~~~~----~~~~~~~~~~~~~~~~P 151 (331)
T 2pn1_A 76 LLTLIDPELGLLAQATERFQAIGVTVIVSPYAACELCFDKYTMYEYCLRQGIAHARTYA----TMASFEEALAAGEVQLP 151 (331)
T ss_dssp EEESSHHHHHHHHHTHHHHHTTTCEECCCCHHHHHHHHBHHHHHHHHHHHTCCCCCEES----SHHHHHHHHHTTSSCSC
T ss_pred EEeCCchhHHHHHHHHHHHHhCCcEEecCCHHHHHHhhCHHHHHHHHHHcCCCCCcEEe----cHHHhhhhhhcccCCCC
Confidence 9998653111 123456777889999999999999999999999999999999999764 456666666 478999
Q ss_pred EEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEe-ccccEEEEEeeeccccc
Q 041518 190 ILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGD-KYGKVLHLYERDCSVQR 268 (765)
Q Consensus 190 vVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d-~~g~vv~l~~r~~s~~~ 268 (765)
+|+||..|+||+|++++++.+|+.++++. ..++++|+||+| +|+++.++.| .+|+++.++.+++...+
T Consensus 152 ~vvKp~~g~g~~gv~~v~~~~el~~~~~~----------~~~~lvee~i~G-~e~~v~~~~d~~~G~~~~~~~~~~~~~~ 220 (331)
T 2pn1_A 152 VFVKPRNGSASIEVRRVETVEEVEQLFSK----------NTDLIVQELLVG-QELGVDAYVDLISGKVTSIFIKEKLTMR 220 (331)
T ss_dssp EEEEESBC---------------------------------CEEEEECCCS-EEEEEEEEECTTTCCEEEEEEEEEEEEE
T ss_pred EEEEeCCCCCCCCeEEeCCHHHHHHHHHh----------CCCeEEEecCCC-cEEEEEEEEecCCCeEEEEEEEEEEEec
Confidence 99999999999999999999999887653 258999999995 9999999998 67888766554432222
Q ss_pred cceeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHH
Q 041518 269 RHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQ 348 (765)
Q Consensus 269 ~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~ 348 (765)
... . ...+. .. .+++.+.+.++++++|+.|++++||+.+ +|++||+|+|||+++..+ ....+|+|+++++
T Consensus 221 ~g~-~-~~~~~-~~----~~~~~~~~~~~~~~lg~~G~~~vd~~~~--~g~~~~iEiN~R~~g~~~-~~~~~G~~~~~~~ 290 (331)
T 2pn1_A 221 AGE-T-DKSRS-VL----RDDVFELVEHVLDGSGLVGPLDFDLFDV--AGTLYLSEINPRFGGGYP-HAYECGVNFPAQL 290 (331)
T ss_dssp TTE-E-EEEEE-EC----CHHHHHHHHHHHTTTCCCEEEEEEEEEE--TTEEEEEEEESSCCTTHH-HHHHTTCCHHHHH
T ss_pred CCc-e-eEeEE-ec----cHHHHHHHHHHHHHhCCcceEEEEEEEc--CCCEEEEEEeCCCCCchH-HHHHcCCCHHHHH
Confidence 111 1 11111 11 2678889999999999999999999975 788999999999987665 4678899999999
Q ss_pred HHHHcCCCCCC
Q 041518 349 IRVANGEPLPL 359 (765)
Q Consensus 349 i~~a~G~~l~~ 359 (765)
+++++|.+++.
T Consensus 291 ~~~~~g~~~~~ 301 (331)
T 2pn1_A 291 YRNLMHEINVP 301 (331)
T ss_dssp HHHHTTCCCCC
T ss_pred HHHHcCCCCCc
Confidence 99999998763
No 40
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=100.00 E-value=7.8e-34 Score=306.79 Aligned_cols=285 Identities=20% Similarity=0.228 Sum_probs=219.0
Q ss_pred CCCCCcCCCCEEEEEcCcH---------HHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHH
Q 041518 29 KSDDKQQRIEKILIANRGE---------IAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGS 99 (765)
Q Consensus 29 ~~~~~~~~~kkILI~g~G~---------~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~ 99 (765)
|+.....|++||+|+-+|. .+..+++++++.|++++.++.+... . .
T Consensus 5 ~~~~~~~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~~-----------------------~--~ 59 (317)
T 4eg0_A 5 MSGIDPKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAERP-----------------------L--S 59 (317)
T ss_dssp ---CCGGGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSC-----------------------T--T
T ss_pred cCccchhhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCch-----------------------H--H
Confidence 5555556778999998762 4789999999999999998732110 1 0
Q ss_pred HHHHHHHHhCCCEEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHH
Q 041518 100 SIVDAAIRTGAQAIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDL 178 (765)
Q Consensus 100 ~Il~~a~~~~~DaV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e 178 (765)
..++.++|.|+|.. |...|+..++.+++.+|++++|++++++.++.||..+|++++++|||+|++.... +.++
T Consensus 60 ----~l~~~~~D~v~~~~hg~~ge~~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~--~~~~ 133 (317)
T 4eg0_A 60 ----ALKDEGFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPPFETVM--RGDD 133 (317)
T ss_dssp ----HHHHTTCCEEEECCCSGGGTSSHHHHHHHHHTCEESSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEEE--TTSC
T ss_pred ----HhhhcCCCEEEEcCCCCCCchHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEEEEE--Cchh
Confidence 12457899999874 5567888999999999999999999999999999999999999999999998665 5555
Q ss_pred HHHHH----HHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccc
Q 041518 179 MKSEA----AKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYG 254 (765)
Q Consensus 179 ~~~~~----~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g 254 (765)
+.+++ +.+|||+||||..|+||+|++++++.+|+.++++.+.. .+..+|||+||+.|+|+++.+++|..+
T Consensus 134 ~~~~~~~~~~~~g~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~i~~G~E~~v~vl~~~~~ 207 (317)
T 4eg0_A 134 YAARATDIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAAT------HDKIVIVEKSIEGGGEYTACIAGDLDL 207 (317)
T ss_dssp HHHHHHHHHHHHCSCEEEEECC-----CCEEECSGGGHHHHHHHHTT------TCSEEEEEECCCSSEEEEEEEETTCCC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------CCCeEEEEcCCCCCcEEEEEEECCccc
Confidence 66666 78999999999999999999999999999999987542 257899999999569999999987666
Q ss_pred cEEEEEeeec--cccccc--eeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCC
Q 041518 255 KVLHLYERDC--SVQRRH--QKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQ 330 (765)
Q Consensus 255 ~vv~l~~r~~--s~~~~~--~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~ 330 (765)
.++.+...+. .+...+ .......|+ .++++..+++.+.+.++++++|++|++++||++++ +|++||+|+|||++
T Consensus 208 ~~~~i~~~~~~~~~~~k~~~g~~~~~~P~-~l~~~~~~~l~~~a~~~~~~lg~~G~~~vD~~~~~-~g~~~vlEiN~~pg 285 (317)
T 4eg0_A 208 PLIKIVPAGEFYDYHAKYVANDTQYLIPC-GLPAEQETELKRIARRAFDVLGCTDWGRADFMLDA-AGNAYFLEVNTAPG 285 (317)
T ss_dssp CCEEEEC---------------CEEESSC-SSCHHHHHHHHHHHHHHHHTTTCCSEEEEEEEECT-TCCEEEEEEESSCC
T ss_pred ceEEEeeCCceechhhcccCCCeeEEcCC-CCCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEeC-CCCEEEEEeeCCCC
Confidence 6555532211 111111 123355788 69999999999999999999999999999999997 78899999999998
Q ss_pred cc-c---cccceecCCCHHHHHHHHH
Q 041518 331 VE-H---PVTEMIVDQDLVEWQIRVA 352 (765)
Q Consensus 331 ~~-~---~~~e~~tGvDl~~~~i~~a 352 (765)
.. + |......|+|+.+++.++.
T Consensus 286 ~t~~s~~p~~~~~~G~~~~~l~~~li 311 (317)
T 4eg0_A 286 MTDHSLPPKAARSIGIGYSELVVKVL 311 (317)
T ss_dssp CSTTSHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCcccHHHHHHHHcCCCHHHHHHHHH
Confidence 32 2 2233468999998887764
No 41
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=100.00 E-value=9.1e-33 Score=305.66 Aligned_cols=302 Identities=14% Similarity=0.162 Sum_probs=227.7
Q ss_pred CEEEEEcCc---H------HHHHHHHHH-HHCCCeEEEEecCCCCCCccc-------------ccc-cEEEEcCCCCcCc
Q 041518 38 EKILIANRG---E------IAYRIMRTA-KRLGIRTVAVYSDADRDSLHV-------------KSA-DEAIRIGPPPARL 93 (765)
Q Consensus 38 kkILI~g~G---~------~a~~iiraa-r~~Gi~vvav~s~~d~~~~~~-------------~~a-D~~~~i~~~~~~~ 93 (765)
+||+|+.+| | .+..+++++ ++.||+++.++.+++...... .+. +.. +. ....
T Consensus 4 ~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~ 79 (377)
T 1ehi_A 4 KRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQNGFFLDTESSKKILALEDEQPIVDAFM---KT-VDAS 79 (377)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEECTTSCBCCHHHHHHHHTTCCHHHHHHHHH---TS-CCTT
T ss_pred cEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEcCCCCEEecccccccccccchhhhccccc---cc-cccc
Confidence 478888876 2 278899999 999999999987765432210 011 000 00 0000
Q ss_pred CCCCHHHHHHHHHHhCCCEEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccC
Q 041518 94 SYLNGSSIVDAAIRTGAQAIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGN 172 (765)
Q Consensus 94 syld~~~Il~~a~~~~~DaV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~ 172 (765)
.+.+...++. +..++|+|+|.. |..+|+..++.+++..|++++|++++++.++.||..+|++++++|||+|++....
T Consensus 80 ~~~~~~~~~~--~~~~~D~v~~~~~g~~gedg~~~~lle~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~ 157 (377)
T 1ehi_A 80 DPLARIHALK--SAGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKYIVVD 157 (377)
T ss_dssp CTTCTTGGGG--TTCCCSEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHTTTCCCCCEEEEC
T ss_pred cccCcchhhc--cccCCCEEEEecCCCCCcCHHHHHHHHHcCCCEeCcCHHHHHHHcCHHHHHHHHHHcCCCCCCEEEEe
Confidence 0111111111 135799999996 7778888889999999999999999999999999999999999999999987655
Q ss_pred CCCHHH----HHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEE
Q 041518 173 EQDIDL----MKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQI 248 (765)
Q Consensus 173 ~~s~~e----~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v 248 (765)
+.++ +.++++.+|||+||||..|+||+||.+|+|.+||..+++.+.. + +..+|||+||+|.+|+++.+
T Consensus 158 --~~~~~~~~~~~~~~~~g~PvvVKP~~~~~s~Gv~~v~~~~el~~a~~~~~~-----~-~~~vlvEe~I~G~~E~~v~v 229 (377)
T 1ehi_A 158 --PESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQ-----Y-DYKVLIEEAVNGARELEVGV 229 (377)
T ss_dssp --TTGGGGCCHHHHHHHHCSCEEEEESSCCTTTTEEEECSHHHHHHHHHHHTT-----T-CSCEEEEECCCCSCEEEEEE
T ss_pred --ccccchHHHHHHHHhcCCCEEEEeCCCCCCcCEEEeCCHHHHHHHHHHHHh-----c-CCcEEEEcCCCCCceEEEEE
Confidence 4333 6666778999999999999999999999999999999887642 1 57999999999549999999
Q ss_pred EEeccccEEEEEeeecc-------ccccce------eeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEC
Q 041518 249 FGDKYGKVLHLYERDCS-------VQRRHQ------KIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDT 315 (765)
Q Consensus 249 ~~d~~g~vv~l~~r~~s-------~~~~~~------k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~ 315 (765)
++++++.++..++..+. +.+... ......|+ .++++..+++.+++.++++++|++|++++||++++
T Consensus 230 l~~~~~~~~~~~ei~~~~~~~~~~~~d~~~k~~~g~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~ 308 (377)
T 1ehi_A 230 IGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFQIPA-QLSPEVTKEVKQMALDAYKVLNLRGEARMDFLLDE 308 (377)
T ss_dssp EESSSCEEEEEEEEECTTSSSSSCCCCHHHHTTCCTTCEEESSC-CCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT
T ss_pred EcCCCcEEEeeEEEEecCCCCcCceeCHHhcccCCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEeC
Confidence 98876566666665441 111111 12345688 59999999999999999999999999999999997
Q ss_pred CCCcEEEEEecccCCccc----cccceecCCCHH---HHHHHHHcCC
Q 041518 316 VSDQFYFMEMNTRLQVEH----PVTEMIVDQDLV---EWQIRVANGE 355 (765)
Q Consensus 316 ~~g~~~~iEiN~R~~~~~----~~~e~~tGvDl~---~~~i~~a~G~ 355 (765)
+|++||+|||||++... |....++|+|+. ..+++.++++
T Consensus 309 -~g~~~vlEiN~rpg~t~~s~~p~~~~a~G~~~~~l~~~li~~al~r 354 (377)
T 1ehi_A 309 -NNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLIDYGFED 354 (377)
T ss_dssp -TCCEEEEEEESSCCCSTTCGGGTGGGGGTCCHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEEeCCCCCCcccHHHHHHHHhCCCHHHHHHHHHHHHHhh
Confidence 78899999999998432 333457899994 4456666543
No 42
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=100.00 E-value=1.6e-33 Score=312.21 Aligned_cols=304 Identities=18% Similarity=0.179 Sum_probs=224.9
Q ss_pred cCCCCEEEEEcCc-----H----HHHHHHHHHHHCCCeEEEEecCCCCCCcccccccE-----------------EEEcC
Q 041518 34 QQRIEKILIANRG-----E----IAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADE-----------------AIRIG 87 (765)
Q Consensus 34 ~~~~kkILI~g~G-----~----~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~-----------------~~~i~ 87 (765)
.|+++||.|+-+| + .|..+++++++.||+++.++.+.+..+......+. .+.+.
T Consensus 19 ~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (386)
T 3e5n_A 19 HMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQGQWHVNDPDSFLLHADDPARIALHRSGRGVALL 98 (386)
T ss_dssp --CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEECGGGSEESTTCTTTCEECCCCCCEEEC
T ss_pred hcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECCCCCEEecccchhhccccccccccccccccceeec
Confidence 3334577666544 2 26788999999999999998776542221111000 11111
Q ss_pred CCCcCcCCCCHHHHHHHHHHhCCCEEEeC-CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCC
Q 041518 88 PPPARLSYLNGSSIVDAAIRTGAQAIHPG-YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLV 166 (765)
Q Consensus 88 ~~~~~~syld~~~Il~~a~~~~~DaV~pg-~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp 166 (765)
+......+.... ...+..++|+|+|. +|...|+..++.+++.+|+|++|+++.++.++.||..+|++++++|||+|
T Consensus 99 ~~~~~~~~~~~~---~~~~~~~~D~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p 175 (386)
T 3e5n_A 99 PGAQQQQLRPIQ---PEQALAQIDVVFPIVHGTLGEDGSLQGLLRMANLPFVGSGVLGSAVAMDKDMAKRVLRDARLAVA 175 (386)
T ss_dssp TTCSSSCEEECC-----CCCCCCSEEEEEECSHHHHSSHHHHHHHHTTCCBSSCCHHHHHHHHBHHHHHHHHHHTTCCBC
T ss_pred cCccccceeccc---cccccCCCCEEEEcCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCCC
Confidence 111100111000 00123579999999 78899999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCHH----HHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCe
Q 041518 167 PGYHGNEQDID----LMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPR 242 (765)
Q Consensus 167 ~~~~~~~~s~~----e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggr 242 (765)
++.... +.+ ++.++++.+|||+||||..|+||+|+++|++.+||.++++.+.. .+..+|||+||+ |+
T Consensus 176 ~~~~~~--~~~~~~~~~~~~~~~lg~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~------~~~~vlVEe~I~-G~ 246 (386)
T 3e5n_A 176 PFVCFD--RHTAAHADVDTLIAQLGLPLFVKPANQGSSVGVSQVRTADAFAAALALALA------YDHKVLVEAAVA-GR 246 (386)
T ss_dssp CEEEEE--HHHHTTCCHHHHHHHHCSSEEEEESBSCSSTTCEEECSGGGHHHHHHHHTT------TCSEEEEEECCC-SE
T ss_pred CEEEEe--CcccchhhHHHHHHhcCCCEEEEECCCCcCCCEEEECCHHHHHHHHHHHHh------CCCcEEEEcCCC-Ce
Confidence 997655 555 67778889999999999999999999999999999999987643 257899999999 49
Q ss_pred eEEEEEEEeccccEEEEEeeecc--ccccceee------eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEE
Q 041518 243 HIEVQIFGDKYGKVLHLYERDCS--VQRRHQKI------IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVD 314 (765)
Q Consensus 243 ei~v~v~~d~~g~vv~l~~r~~s--~~~~~~k~------~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~ 314 (765)
|+++.++.++...++..++..+. +.....+. ....|+ .++++..+++.+.+.++++++|++|++++||+++
T Consensus 247 E~~v~vl~~~~~~~~~~gei~~~~~~~d~~~ky~~~~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~ 325 (386)
T 3e5n_A 247 EIECAVLGNAVPHASVCGEVVVHDAFYSYATKYISEHGAEIVIPA-DIDAQTQQRIQQIAVQAYQALGCAGMARVDVFLC 325 (386)
T ss_dssp EEEEEEECSSSCEEEEEEEECC-----------------CEESSC-SSCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEEC
T ss_pred EEEEEEEeCCCceEEEeEEEEeCCcccchhcccCCCCCeEEEECC-CCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEE
Confidence 99999998876566655555433 22222222 234588 6999999999999999999999999999999999
Q ss_pred CCCCcEEEEEecccCCc-cc---cccceecCCCHHHHHHHH
Q 041518 315 TVSDQFYFMEMNTRLQV-EH---PVTEMIVDQDLVEWQIRV 351 (765)
Q Consensus 315 ~~~g~~~~iEiN~R~~~-~~---~~~e~~tGvDl~~~~i~~ 351 (765)
+ +|++||+|||||++. .+ |.....+|+|+.+++.++
T Consensus 326 ~-dg~~~vlEiN~~PG~t~~S~~p~~~~~~Gi~~~~li~~l 365 (386)
T 3e5n_A 326 A-DGRIVINEVNTLPGFTRISVYPKLWQASGLDYRGLITRL 365 (386)
T ss_dssp T-TCCEEEEEEESSCCCSTTCHHHHHHHTTTCCHHHHHHHH
T ss_pred C-CCcEEEEEeECCCCCCccCHHHHHHHHhCCCHHHHHHHH
Confidence 7 788999999999983 22 333346799987766554
No 43
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=100.00 E-value=4.2e-32 Score=298.93 Aligned_cols=289 Identities=17% Similarity=0.212 Sum_probs=218.7
Q ss_pred HHHHHHHHHHCCCeEEEEecCCCCCCcccccccE-----------------EEEcCCCCcCcCCCCHHHHHHHHHHhCCC
Q 041518 49 AYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADE-----------------AIRIGPPPARLSYLNGSSIVDAAIRTGAQ 111 (765)
Q Consensus 49 a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~-----------------~~~i~~~~~~~syld~~~Il~~a~~~~~D 111 (765)
|..+++++++.||+++.++.+.+.........+. .+.+.+.......... .......++|
T Consensus 24 ~~~v~~al~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D 100 (364)
T 3i12_A 24 AKNIVDAIDKTRFDVVLLGIDKAGQWHVNDAENYLQNADDPAHIALRPSAISLAQVPGKHQHQLINA---QNGQPLPTVD 100 (364)
T ss_dssp HHHHHHHSCTTTEEEEEEEECTTSCEEEECSSSSBSSTTCTTTCCBCCCSCBEEECTTCSSSCEEET---TTCCBCCCCS
T ss_pred HHHHHHHHhhcCCeEEEEEECCCCCEEecccchhhhccccccccccccccccceecccccccceecc---ccccccCCCC
Confidence 6788999999999999998765532211100000 0111111000000000 0000135799
Q ss_pred EEEeC-CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHH----HHHHHHHHh
Q 041518 112 AIHPG-YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDID----LMKSEAAKI 186 (765)
Q Consensus 112 aV~pg-~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~----e~~~~~~~i 186 (765)
+|+|. +|...|+..++.+++.+|++++|+++.++.++.||..+|++++++|||+|++.... +.+ ++.++++.+
T Consensus 101 ~vf~~lhG~~gEdg~iq~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~--~~~~~~~~~~~~~~~l 178 (364)
T 3i12_A 101 VIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFITLT--RTNRHAFSFAEVESRL 178 (364)
T ss_dssp EEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEEEE--TTTGGGCCHHHHHHHH
T ss_pred EEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEE--ccccchhhHHHHHHhc
Confidence 99999 79999999999999999999999999999999999999999999999999998765 444 677788899
Q ss_pred CCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeee--c
Q 041518 187 GYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERD--C 264 (765)
Q Consensus 187 g~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~--~ 264 (765)
|||+||||..|++|+|++++++.+|+.++++.+... +..+|||+||+| +|+++.++.++...+...++.. .
T Consensus 179 g~PvvVKP~~ggss~Gv~~v~~~~el~~a~~~a~~~------~~~vlVEe~I~G-~E~~v~vl~~~~~~~~~~~ei~~~~ 251 (364)
T 3i12_A 179 GLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEF------DHKVVVEQGIKG-REIECAVLGNDNPQASTCGEIVLNS 251 (364)
T ss_dssp CSSEEEEETTCCTTTTCEEESSHHHHHHHHHHHHHH------CSEEEEEECCCS-EEEEEEEEESSSCEEEEEEEEECCT
T ss_pred CCCEEEEECCCCCCcCeEEeCCHHHHHHHHHHHHhc------CCcEEEEcCcCC-eEEEEEEEeCCCceEeeeEEEecCC
Confidence 999999999999999999999999999999887643 579999999995 9999999988765455554421 1
Q ss_pred ccccccee------eeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCcc-c---c
Q 041518 265 SVQRRHQK------IIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVE-H---P 334 (765)
Q Consensus 265 s~~~~~~k------~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~-~---~ 334 (765)
.+.....+ .....|+ .++++..+++.+.+.++++++|++|++++||++++ +|++||+|+|+|++.. + |
T Consensus 252 ~~~~~~~ky~~~~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~-~g~~~vlEiN~~Pg~t~~s~~p 329 (364)
T 3i12_A 252 EFYAYDTKYIDDNGAQVVVPA-QIPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLTA-DNEVVINEINTLPGFTNISMYP 329 (364)
T ss_dssp TCC--TTTTSGGGGCEEESSC-SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT-TCCEEEEEEESSCCCSTTCHHH
T ss_pred CccCHHHcccCCCceEEEeCC-CCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEec-CCCEEEEEeeCCCCCCCCCHHH
Confidence 12211111 3445688 59999999999999999999999999999999997 7889999999999732 2 3
Q ss_pred ccceecCCCHHHHHHHH
Q 041518 335 VTEMIVDQDLVEWQIRV 351 (765)
Q Consensus 335 ~~e~~tGvDl~~~~i~~ 351 (765)
.....+|+|+.++..++
T Consensus 330 ~~~~a~G~~~~~l~~~l 346 (364)
T 3i12_A 330 KLWQASGLGYTDLISRL 346 (364)
T ss_dssp HHHHTTTCCHHHHHHHH
T ss_pred HHHHHhCcCHHHHHHHH
Confidence 33456799988866554
No 44
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=100.00 E-value=5.8e-33 Score=305.82 Aligned_cols=299 Identities=19% Similarity=0.246 Sum_probs=220.6
Q ss_pred CCEEEEEcCc---------HHHHHHHHHHHHCCCeEEEEecCCCCCCcccc----ccc--EEEEc-CCCCcCcCCCCHHH
Q 041518 37 IEKILIANRG---------EIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK----SAD--EAIRI-GPPPARLSYLNGSS 100 (765)
Q Consensus 37 ~kkILI~g~G---------~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~----~aD--~~~~i-~~~~~~~syld~~~ 100 (765)
.+||+|+.+| ..+..+++++++.||+++.++.+++....... .++ ..+.+ ++ ....+ +.
T Consensus 3 ~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~ 77 (364)
T 2i87_A 3 KENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIKSTDELHLENG--EALEI---SQ 77 (364)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEECTTCCEEEECCCCSCCCSGGGSCGGGS--EEECS---SG
T ss_pred CcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEcCCCCEEeccccccccccchhhccccc--ccccc---cc
Confidence 3578888766 23688899999999999999877654321100 000 00000 01 00011 11
Q ss_pred HHHH-HHHhCCCEEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHH-
Q 041518 101 IVDA-AIRTGAQAIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDID- 177 (765)
Q Consensus 101 Il~~-a~~~~~DaV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~- 177 (765)
++.. .+..++|+|+|.. |...|+..++.+++..|++++|++++++.++.||..++++++++|||+|++.... +.+
T Consensus 78 ~~~~~~~~~~~D~v~~~~~g~~~ed~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~--~~~~ 155 (364)
T 2i87_A 78 LLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFL--RSEY 155 (364)
T ss_dssp GGGBCTTSSBCSEEEEECCCSSSCTTHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHHTCCCCCEEEEE--HHHH
T ss_pred cccccccccCCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCEEEEe--chhh
Confidence 2111 0346799999986 7778888889999999999999999999999999999999999999999987654 443
Q ss_pred ------HHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEe
Q 041518 178 ------LMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGD 251 (765)
Q Consensus 178 ------e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d 251 (765)
++.++++.+|||+||||..|+||+||++|++.+||..+++.+.. .+..+|||+||+ |+|+++.++++
T Consensus 156 ~~~~~~~~~~~~~~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~I~-G~E~~v~vl~~ 228 (364)
T 2i87_A 156 EKYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQ------FDRKLVIEQGVN-AREIEVAVLGN 228 (364)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEEESSCSSCTTCEEESSHHHHHHHHHHHHT------TCSEEEEEECCC-CEEEEEEEEES
T ss_pred cccchhHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEEeCcc-CeEEEEEEEcC
Confidence 46667788999999999999999999999999999999887653 257999999999 59999999987
Q ss_pred ccccEEEEEeeec--cccccceee-----eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEE
Q 041518 252 KYGKVLHLYERDC--SVQRRHQKI-----IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFME 324 (765)
Q Consensus 252 ~~g~vv~l~~r~~--s~~~~~~k~-----~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iE 324 (765)
+++.++..++..+ .+.+...++ ....|+ .++++..+++.+++.++++++|++|++++||++++ +|++||+|
T Consensus 229 ~~~~~~~~~e~~~~~~~~~~~~k~~~g~~~~~~pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~-~g~~~viE 306 (364)
T 2i87_A 229 DYPEATWPGEVVKDVAFYDYKSKYKDGKVQLQIPA-DLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTE-DNQIYINE 306 (364)
T ss_dssp SSCEECCCEEECCSCCC-----------CCEESSC-SSCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT-TCCEEEEE
T ss_pred CCcEEeeeEEEecCCCcCCHHHcccCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHcCCCcEEEEEEEEec-CCCEEEEE
Confidence 6544443343321 122222222 234688 59999999999999999999999999999999997 78899999
Q ss_pred ecccCCccc----cccceecCCCHHHHHHHH
Q 041518 325 MNTRLQVEH----PVTEMIVDQDLVEWQIRV 351 (765)
Q Consensus 325 iN~R~~~~~----~~~e~~tGvDl~~~~i~~ 351 (765)
||||++... |.....+|+|+.++..++
T Consensus 307 iN~rpg~t~~s~~p~~~~~~G~~~~~l~~~l 337 (364)
T 2i87_A 307 TNAMPGFTAFSMYPKLWENMGLSYPELITKL 337 (364)
T ss_dssp EESSCCCSTTSHHHHHHHHTTCCHHHHHHHH
T ss_pred EeCCCCCCchhHHHHHHHHhCCCHHHHHHHH
Confidence 999998432 223346799986664443
No 45
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=100.00 E-value=1.1e-31 Score=287.40 Aligned_cols=273 Identities=21% Similarity=0.301 Sum_probs=215.4
Q ss_pred CCCEEEEEcCcH---------HHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHH
Q 041518 36 RIEKILIANRGE---------IAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAI 106 (765)
Q Consensus 36 ~~kkILI~g~G~---------~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~ 106 (765)
|++||+|+++|. .+..++++++++|++++.++.+ +.. ... +.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~-~~~--~~~--------------------------~~ 51 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK-EVD--VTQ--------------------------LK 51 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT-TSC--GGG--------------------------TT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC-chH--HHH--------------------------hh
Confidence 457999999885 5788999999999999988755 211 100 01
Q ss_pred HhCCCEEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHH----
Q 041518 107 RTGAQAIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKS---- 181 (765)
Q Consensus 107 ~~~~DaV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~---- 181 (765)
+.++|+|++.. +...|+..++..++..|++++|++++++..+.||..++++++++|||+|++.... +. ++.+
T Consensus 52 ~~~~d~v~~~~~~~~~e~~~~~~~~e~~g~~~~g~~~~~~~~~~dK~~~~~~l~~~gi~~p~~~~~~--~~-~~~~~~~~ 128 (306)
T 1iow_A 52 SMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALT--RA-EFEKGLSD 128 (306)
T ss_dssp TTTEEEEEECCCSTTTSSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCBCCEEEEE--HH-HHHHCCCT
T ss_pred ccCCCEEEEcCCCCCCcchHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCCCCCCeEEEc--hh-hhhccchh
Confidence 25678888874 3345777778889999999999999999999999999999999999999987654 45 6655
Q ss_pred ----HHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEE
Q 041518 182 ----EAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVL 257 (765)
Q Consensus 182 ----~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv 257 (765)
++++++||+|+||..|+||+|++++++.+|+.++++.+.. + +..+++|+||+ |+|+++.++. |+++
T Consensus 129 ~~~~~~~~~~~p~vvKP~~g~~~~gv~~v~~~~el~~~~~~~~~-----~-~~~~lvee~i~-g~e~~v~~~~---g~~~ 198 (306)
T 1iow_A 129 KQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQ-----H-DEEVLIEKWLS-GPEFTVAILG---EEIL 198 (306)
T ss_dssp HHHHHHHTTCSSEEEEETTCCTTTTCEEESSGGGHHHHHHHHTT-----T-CSEEEEEECCC-CCEEEEEEET---TEEC
T ss_pred hhhhHHhccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh-----h-CCCEEEEeCcC-CEEEEEEEEC---CCcc
Confidence 6788999999999999999999999999999998876642 2 47999999999 6899999982 3443
Q ss_pred EEEeeec-----cccccc--eeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCC
Q 041518 258 HLYERDC-----SVQRRH--QKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQ 330 (765)
Q Consensus 258 ~l~~r~~-----s~~~~~--~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~ 330 (765)
.+.+... .....+ .......|+ .++++..+++.+.+.++++++|+.|++++||++++ +|++||+|+|+|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~g~~~~~~p~-~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~-~g~~~~iEiN~rpg 276 (306)
T 1iow_A 199 PSIRIQPSGTFYDYEAKFLSDETQYFCPA-GLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDS-DGQFYLLEANTSPG 276 (306)
T ss_dssp CCEEEECSSSSSCHHHHHTCSCCEEESSC-CCCHHHHHHHHHHHHHHHHHHTCCSEEEEEEEECT-TSCEEEEEEESSCC
T ss_pred ceEEEEeCCCeEchhheecCCCeeEEcCC-CCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEcC-CCCEEEEEecCCCC
Confidence 3333211 110011 123345687 58999999999999999999999999999999997 78899999999998
Q ss_pred ccc----cccceecCCCHHHHHHHHH
Q 041518 331 VEH----PVTEMIVDQDLVEWQIRVA 352 (765)
Q Consensus 331 ~~~----~~~e~~tGvDl~~~~i~~a 352 (765)
... |.....+|+|+.++++++.
T Consensus 277 ~~~~s~~p~~~~~~G~~~~~~~~~~~ 302 (306)
T 1iow_A 277 MTSHSLVPMAARQAGMSFSQLVVRIL 302 (306)
T ss_dssp CSTTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHcCCCHHHHHHHHH
Confidence 432 2335568999999998875
No 46
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=100.00 E-value=7.3e-32 Score=298.34 Aligned_cols=300 Identities=17% Similarity=0.211 Sum_probs=213.7
Q ss_pred CEEEEEcCc---------HHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-cccEEE---EcCCCCcC--cCCCCHHHHH
Q 041518 38 EKILIANRG---------EIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-SADEAI---RIGPPPAR--LSYLNGSSIV 102 (765)
Q Consensus 38 kkILI~g~G---------~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~aD~~~---~i~~~~~~--~syld~~~Il 102 (765)
+||+|+-+| ..|..+++++++.||+++.++.+.+....... ..+... .+...... .-..+...++
T Consensus 38 ~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (383)
T 3k3p_A 38 ETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQAGDFIKTQEFDSQPSETDKLMTNDTIIASQKIKPSDIY 117 (383)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEEEEESSCCC--CCCCCTTSCCGGGEECGGGGC
T ss_pred CeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEecCCCCEEecccccccccccccccccccccccccccccccc
Confidence 367777654 23788999999999999999877553221100 000000 00000000 0000000111
Q ss_pred HHHHHhCCCEEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCC-CCCCCccccCCC-CH-HH
Q 041518 103 DAAIRTGAQAIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAG-VPLVPGYHGNEQ-DI-DL 178 (765)
Q Consensus 103 ~~a~~~~~DaV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~G-vpvp~~~~~~~~-s~-~e 178 (765)
.++|.|+|.. |...|+..++.+++.+|+|++|+++.++.++.||..+|++++++| ||+|++...... +. ++
T Consensus 118 -----~~~D~vf~~lhG~~GEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~G~Ipvp~~~~~~~~~~~~~~ 192 (383)
T 3k3p_A 118 -----EEEAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGTNILSSSVAMDKITTNQVLESATTIPQVAYVALIEGEPLESK 192 (383)
T ss_dssp -----CTTCEEEEECCSTTTSSSHHHHHHHHTTCCBSSCCHHHHHHHHCHHHHHHHHHHHCCCCBCCEEEEETTSCHHHH
T ss_pred -----cCCCEEEEcCCCCCcchHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHhCCCcCCCCEEEEeCccchhHH
Confidence 3789999974 667799999999999999999999999999999999999999999 999999866521 22 56
Q ss_pred HHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEE
Q 041518 179 MKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLH 258 (765)
Q Consensus 179 ~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~ 258 (765)
+.++.+.+|||+||||..|+||+|++++++.+||.++++.+... +..+|||+||+ |+|+++.++.|+...+..
T Consensus 193 ~~~~~~~lg~PvvVKP~~ggss~GV~~v~~~~el~~al~~a~~~------~~~vlVEe~I~-G~E~~v~vl~d~~~~~~~ 265 (383)
T 3k3p_A 193 LAEVEEKLIYPVFVKPANMGSSVGISKAENRTDLKQAIALALKY------DSRVLIEQGVD-AREIEVGILGNTDVKTTL 265 (383)
T ss_dssp HHHHHHHCCSSEEEEECC------CEEESSHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEEEESSSCEECC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHhC------CCeEEEEcCCC-CeEEEEEEEeCCCeeEEe
Confidence 77788899999999999999999999999999999999887643 57999999999 699999999875543333
Q ss_pred EEee--ecccccccee-----eeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCc
Q 041518 259 LYER--DCSVQRRHQK-----IIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQV 331 (765)
Q Consensus 259 l~~r--~~s~~~~~~k-----~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~ 331 (765)
+.+. ++.+.....| .....|+ .++++..+++.+.+.++++++|++|++++||++++ +|++||+|||||++.
T Consensus 266 ~~ei~~~~~~~d~~~ky~~g~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~-~g~~~vlEINtrPG~ 343 (383)
T 3k3p_A 266 PGEIVKDVAFYDYEAKYIDNKITMAIPA-EIDPVIVEKMRDYAATAFRTLGCCGLSRCDFFLTE-DGKVYLNELNTMPGF 343 (383)
T ss_dssp CEEEC-----------------CEESSC-CCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT-TCCEEEEEEESSCCC
T ss_pred eEEEecCCCccchhhcccCCCeeEEecC-CCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEEC-CCCEEEEEeeCCCCC
Confidence 3332 1222222222 3455788 59999999999999999999999999999999997 788999999999983
Q ss_pred c-c---cccceecCCCHHHHHHHH
Q 041518 332 E-H---PVTEMIVDQDLVEWQIRV 351 (765)
Q Consensus 332 ~-~---~~~e~~tGvDl~~~~i~~ 351 (765)
. + |.....+|+|+.++..++
T Consensus 344 t~~S~~p~~~~a~Gi~~~~li~~l 367 (383)
T 3k3p_A 344 TQWSMYPLLWENMGLSYSVLIEEL 367 (383)
T ss_dssp C--CHHHHHHHHTTCCHHHHHHHH
T ss_pred CcccHHHHHHHHhCCCHHHHHHHH
Confidence 2 2 333446799987766554
No 47
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.2e-32 Score=300.67 Aligned_cols=237 Identities=21% Similarity=0.271 Sum_probs=191.2
Q ss_pred hCCCEEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHh
Q 041518 108 TGAQAIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKI 186 (765)
Q Consensus 108 ~~~DaV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~i 186 (765)
.++|+|+|.. |...|+..++.+++.+|++++|+++.++.++.||..+|++++++|||+|++......+.....+..+.+
T Consensus 108 ~~~D~vfp~lhG~~gEdg~iq~lle~~gip~vG~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~~~l 187 (373)
T 3lwb_A 108 ESVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLHRQECERL 187 (373)
T ss_dssp HTCSEEEECCEETTEECCHHHHHHHHHTCCBSSSCHHHHHHHHBHHHHHHHHHHTTCCBCCEEEECTTCCCCCHHHHHHH
T ss_pred CCccEEEECCCCCCCccHHHHHHHHHcCCCccCCcHHHHHHHcCHHHHHHHHHHcCcCCCCEEEEECcccchhHHHHHhc
Confidence 3799999996 888899999999999999999999999999999999999999999999999866522211112346789
Q ss_pred CCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccc--cEEEEEeeec
Q 041518 187 GYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYG--KVLHLYERDC 264 (765)
Q Consensus 187 g~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g--~vv~l~~r~~ 264 (765)
|||+||||..|+||+||++|++.+||.++++.+... +..+|||+||+ |+|+++.++.++.+ .+..+.+..+
T Consensus 188 g~PvvVKP~~ggss~GV~~v~~~~eL~~a~~~a~~~------~~~vlVEe~I~-G~E~~v~vl~~~~~~~~~~~~~ei~~ 260 (373)
T 3lwb_A 188 GLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRH------DPKVIVEAAIS-GRELECGVLEMPDGTLEASTLGEIRV 260 (373)
T ss_dssp CSCEEEEESBCSTTTTCEEECSGGGHHHHHHHHHTT------CSSEEEEECCE-EEEEEEEEEECTTSCEEECCCEEEEC
T ss_pred CCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEeCCCC-CeEEEEEEEECCCCceEEeeeeEEEc
Confidence 999999999999999999999999999999887642 57999999999 69999999998766 3333444433
Q ss_pred c--------cccccee-----eeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCc
Q 041518 265 S--------VQRRHQK-----IIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQV 331 (765)
Q Consensus 265 s--------~~~~~~k-----~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~ 331 (765)
. +.+...| .....|+ .++++..+++.+.+.+++++||++|++++||++++ +|. ||+|||||++.
T Consensus 261 ~~~~~~~~~~~d~~~ky~~~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~~-dg~-~vlEIN~~PG~ 337 (373)
T 3lwb_A 261 AGVRGREDSFYDFATKYLDDAAELDVPA-KVDDQVAEAIRQLAIRAFAAIDCRGLARVDFFLTD-DGP-VINEINTMPGF 337 (373)
T ss_dssp CSTTCSEESSSCHHHHHTCTTCEEESSC-CCCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEET-TEE-EEEEEESSCCC
T ss_pred cCCCCccccccchhhcccCCCceEEeCC-CCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEEC-CCC-EEEEecCCCCC
Confidence 2 2222222 2334688 69999999999999999999999999999999997 787 99999999973
Q ss_pred c-c---cccceecCCCHHHHH---HHHHcC
Q 041518 332 E-H---PVTEMIVDQDLVEWQ---IRVANG 354 (765)
Q Consensus 332 ~-~---~~~e~~tGvDl~~~~---i~~a~G 354 (765)
. + |.....+|+|+.+++ ++.|+.
T Consensus 338 t~~S~~p~~~~a~Gi~~~~li~~li~~a~~ 367 (373)
T 3lwb_A 338 TTISMYPRMWAASGVDYPTLLATMIETTLA 367 (373)
T ss_dssp STTSHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 2 2 223357899976654 555543
No 48
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=99.98 E-value=1.3e-31 Score=295.22 Aligned_cols=290 Identities=17% Similarity=0.182 Sum_probs=208.7
Q ss_pred HHHHHHHHHHCCCeEEEEecCCCCCCcccccc----------------cEEEEcCCCCcCcCCCCHHHHHHHHH-HhCCC
Q 041518 49 AYRIMRTAKRLGIRTVAVYSDADRDSLHVKSA----------------DEAIRIGPPPARLSYLNGSSIVDAAI-RTGAQ 111 (765)
Q Consensus 49 a~~iiraar~~Gi~vvav~s~~d~~~~~~~~a----------------D~~~~i~~~~~~~syld~~~Il~~a~-~~~~D 111 (765)
|..+++++++.||+++.++.+.+......... +..+.+.+.......... .... ..++|
T Consensus 25 a~~v~~~l~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~D 100 (372)
T 3tqt_A 25 AKNIVNTLDAAKYLISVIFIDHVGRWYLIDQPEMFLAHSPDHLVKEGSARPITIAFGDAAKPWQSL----NGDGRRYSAD 100 (372)
T ss_dssp HHHHHHHSCTTTEEEEEEEECTTSCEEEECCHHHHHHSCHHHHHHHTCSEEEEECTTCSSCCEEEC--------CEECCS
T ss_pred HHHHHHHHhhcCceEEEEEECCCCCEEeccchhhhhccccccccccccccceeecccccccceeec----cccccccCCC
Confidence 78888999999999999987765432210000 111112110000000000 0001 15799
Q ss_pred EEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCC--HHHHHHHHHHhCC
Q 041518 112 AIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQD--IDLMKSEAAKIGY 188 (765)
Q Consensus 112 aV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s--~~e~~~~~~~ig~ 188 (765)
+|+|.. |...|+..++.+++.+|+|++|+++.++.++.||..+|++++++|||+|++......+ ...+.++.+.+||
T Consensus 101 ~vf~~lhG~~gEdg~iq~lle~~gipy~G~~~~a~~~~~DK~~~k~~l~~~GIp~p~~~~~~~~~~~~~~~~~~~~~lg~ 180 (372)
T 3tqt_A 101 CVFPMVHGTQGEDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDWHTLSPRDATEGVYQRLLDRWGT 180 (372)
T ss_dssp EEEECCCSTTTTSSHHHHHHHHTTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCCBCCCEEECTTSCCTTHHHHHHHHC--
T ss_pred EEEEcCCCCCCcCHHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHCCcCCCCEEEEechhhhhhHHHHHHHhcCC
Confidence 999984 7788999999999999999999999999999999999999999999999997665222 1125567788999
Q ss_pred c-EEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeee----
Q 041518 189 P-ILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERD---- 263 (765)
Q Consensus 189 P-vVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~---- 263 (765)
| +||||..|+||+||++|++.+||.++++.+.. + +..+|||+||+ |+|+++.+++++...+..+.+..
T Consensus 181 P~vvVKP~~ggss~Gv~~v~~~~eL~~a~~~a~~-----~-~~~vlVEe~I~-G~E~~v~vl~~~~~~~~~~~ei~~~~~ 253 (372)
T 3tqt_A 181 SELFVKAVSLGSSVATLPVKTETEFTKAVKEVFR-----Y-DDRLMVEPRIR-GREIECAVLGNGAPKASLPGEIIPHHD 253 (372)
T ss_dssp -CEEEEESSCCSGGGEEEECSHHHHHHHHHHHTT-----T-CSCEEEEECCC-SEEEEEEEEESSSCEECCCEEEECC--
T ss_pred CeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHh-----c-CCCEEEECCCC-CEEEEEEEEeCCCceEeeeEEEecCCC
Confidence 9 99999999999999999999999999887643 2 57899999999 69999999987642222222211
Q ss_pred -ccccccce--e-eeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCcc-c---cc
Q 041518 264 -CSVQRRHQ--K-IIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVE-H---PV 335 (765)
Q Consensus 264 -~s~~~~~~--k-~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~-~---~~ 335 (765)
+.+...+. . .....|+ .++++..+++.+++.+++++||++|+++|||++++ +|++||+|||||++.. + |.
T Consensus 254 ~~d~~~ky~~g~~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~rvDf~~~~-dg~~~vlEINt~PG~t~~S~~p~ 331 (372)
T 3tqt_A 254 YYSYDAKYLDPNGATTTTSV-DLSESVTKQIQQIAIDAFKMVHCSGMARVDFFVTP-NNKVLVNEINTIPGFTNISMYPK 331 (372)
T ss_dssp -------------CEEESCC-CCCHHHHHHHHHHHHHHHHHTTCCEEEEEEEEECT-TCCEEEEEEESSCCCSTTCHHHH
T ss_pred ccchhhcccCCCceEEEeCC-CCCHHHHHHHHHHHHHHHHHhCCccEEEEEEEEeC-CCcEEEEEEECCCCcCccCHHHH
Confidence 12222222 1 3456788 69999999999999999999999999999999997 7889999999999832 2 33
Q ss_pred cceecCCCHHHHHHHH
Q 041518 336 TEMIVDQDLVEWQIRV 351 (765)
Q Consensus 336 ~e~~tGvDl~~~~i~~ 351 (765)
....+|+|+.++..++
T Consensus 332 ~~~~~G~~~~~li~~l 347 (372)
T 3tqt_A 332 MWEASGLPCPNLLDQL 347 (372)
T ss_dssp HHHHTTCCHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHH
Confidence 4456899987766544
No 49
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=99.97 E-value=5.8e-31 Score=282.52 Aligned_cols=270 Identities=17% Similarity=0.247 Sum_probs=205.6
Q ss_pred EEEEEcCc---------HHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhC
Q 041518 39 KILIANRG---------EIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTG 109 (765)
Q Consensus 39 kILI~g~G---------~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~ 109 (765)
||+|+.+| ..+..+++++++.|++++.++.+.... + +.+..+
T Consensus 5 ~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~---------------------------~--~~~~~~ 55 (307)
T 3r5x_A 5 RIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMD---------------------------L--IEKAKD 55 (307)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGG---------------------------H--HHHTTT
T ss_pred EEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchh---------------------------H--HHhccC
Confidence 77777665 237889999999999998887532110 0 112258
Q ss_pred CCEEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHH-HHHHhC
Q 041518 110 AQAIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKS-EAAKIG 187 (765)
Q Consensus 110 ~DaV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~-~~~~ig 187 (765)
+|.|++.. +...|+..++..++..|++++|++++++.++.||..++++++++|||+|++.... +.+++.. +++.++
T Consensus 56 ~D~v~~~~~~~~ge~~~~~~~le~~gi~~~g~~~~~~~~~~dK~~~~~~l~~~Gip~p~~~~~~--~~~~~~~~~~~~~~ 133 (307)
T 3r5x_A 56 IDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELT--KMEDLNFDELDKLG 133 (307)
T ss_dssp CSEEEECCCSHHHHSSHHHHHHHHHTCCBSSSCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEEE--SSSCCCHHHHHHHC
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEEEEe--ChhhhhHHHHHhcC
Confidence 99999985 3344777888899999999999999999999999999999999999999988655 4444433 677899
Q ss_pred CcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEeeecccc
Q 041518 188 YPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYERDCSVQ 267 (765)
Q Consensus 188 ~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r~~s~~ 267 (765)
||+||||..|+||+|++++++.+|+.++++.+... +..++||+||+ |+|+++.++.+ +++.+........
T Consensus 134 ~P~vvKP~~~~~s~Gv~~v~~~~el~~~~~~~~~~------~~~~lvee~i~-G~e~~v~v~~g---~~~~~~~~~~~~~ 203 (307)
T 3r5x_A 134 FPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEW------DSEVVIEKYIK-GEEITCSIFDG---KQLPIISIRHAAE 203 (307)
T ss_dssp SSEEEEECC----CCCEEECSHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEEETT---EECCCEEEEEEEE
T ss_pred CCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHhc------CCCEEEECCcC-CEEEEEEEECC---EEeeEEEEEcCCc
Confidence 99999999999999999999999999999887643 57999999999 59999998632 3322222211111
Q ss_pred --ccceee----eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCcc-c---cccc
Q 041518 268 --RRHQKI----IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVE-H---PVTE 337 (765)
Q Consensus 268 --~~~~k~----~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~-~---~~~e 337 (765)
....+. ....|+ .++++..+++.+.+.++++++|++|.+++||+++ +|++||||+|+|++.. + |...
T Consensus 204 ~~~~~~~~~~~g~~~~p~-~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~--~g~~~vlEiN~rpg~~~~s~~~~~~ 280 (307)
T 3r5x_A 204 FFDYNAKYDDASTIEEVI-ELPAELKERVNKASLACYKALKCSVYARVDMMVK--DGIPYVMEVNTLPGMTQASLLPKSA 280 (307)
T ss_dssp EETTEEEEEEEEEEEEEC-CCCHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEE--TTEEEEEEEESSCCCSTTSHHHHHH
T ss_pred ccChhhcCCCCCCeEecC-CCCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEE--CCeEEEEEEcCCCCCCccCHHHHHH
Confidence 222222 222377 6899999999999999999999999999999999 5889999999999832 2 2334
Q ss_pred eecCCCHHHHHHHHH
Q 041518 338 MIVDQDLVEWQIRVA 352 (765)
Q Consensus 338 ~~tGvDl~~~~i~~a 352 (765)
..+|+|+.+++.++.
T Consensus 281 ~~~G~~~~~li~~ll 295 (307)
T 3r5x_A 281 DAAGIHYSKLLDMII 295 (307)
T ss_dssp HHTTCCHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHH
Confidence 578999988766653
No 50
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=99.97 E-value=4.5e-32 Score=296.25 Aligned_cols=297 Identities=16% Similarity=0.168 Sum_probs=219.2
Q ss_pred CCEEEEEcCcH---------HHHHHHHHHHHCCCeEEEEecCCCCCCccc-----ccc----cEEEEcCCCCcCcCCCCH
Q 041518 37 IEKILIANRGE---------IAYRIMRTAKRLGIRTVAVYSDADRDSLHV-----KSA----DEAIRIGPPPARLSYLNG 98 (765)
Q Consensus 37 ~kkILI~g~G~---------~a~~iiraar~~Gi~vvav~s~~d~~~~~~-----~~a----D~~~~i~~~~~~~syld~ 98 (765)
.+||+|+.+|. .+..+++++++.||+++.++.+++...... .+. |.. .+.+......
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---- 77 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVWKMCEKPCAEWENENCYSA-VLSPDKKMHG---- 77 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCEEEESCCCTTCCCTTCEEE-EECSCTTTCE----
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEcCCCCEEecccchhhcccccccce-eccccccccc----
Confidence 35888887762 378899999999999999987665432110 011 122 2222111000
Q ss_pred HHH-HHH--HHHhCCCEEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCC
Q 041518 99 SSI-VDA--AIRTGAQAIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQ 174 (765)
Q Consensus 99 ~~I-l~~--a~~~~~DaV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~ 174 (765)
.+ ++. .+..++|+|+|.. |...|+..++.+++..|++++|++++++.++.||..+|++++++|||+|++....
T Consensus 78 -~~~~~~~~~~~~~~D~v~~~~~g~~ged~~~~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~-- 154 (343)
T 1e4e_A 78 -LLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFWVIN-- 154 (343)
T ss_dssp -EEEEETTEEEEEECSEEEECCCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEEEEC--
T ss_pred -ceeecccccccccCCEEEEeCCCCCCcCHHHHHHHHHcCCCccCCCHHHHHHHhCHHHHHHHHHHCCCCcCCEEEEe--
Confidence 01 000 1235799999984 5567888889999999999999999999999999999999999999999987654
Q ss_pred CHHHHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccc
Q 041518 175 DIDLMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYG 254 (765)
Q Consensus 175 s~~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g 254 (765)
+.+++.. +.+|||+||||..|+||+||+++++.+||..+++.+.. .+..+|||+||+ |+|+++.++.++.+
T Consensus 155 ~~~~~~~--~~~~~PvvvKP~~~~~s~Gv~~v~~~~el~~a~~~~~~------~~~~~lvEe~I~-G~E~~v~vl~~~~~ 225 (343)
T 1e4e_A 155 KDDRPVA--ATFTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQ------YDSKILIEQAVS-GCEVGCAVLGNSAA 225 (343)
T ss_dssp TTCCCCG--GGSCSCEEEEESSCCTTTTCEEECSGGGHHHHHHHHTT------TCSSEEEEECCC-SEEEEEEEEEETTC
T ss_pred chhhhhh--hccCCCEEEEeCCCCCCCCEEEeCCHHHHHHHHHHHHh------cCCcEEEEeCcC-CeEEEEEEEeCCCC
Confidence 3333321 57899999999999999999999999999999887642 157999999999 69999999988654
Q ss_pred cE-EEEEeeecc--ccc---cc------eeeeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEE
Q 041518 255 KV-LHLYERDCS--VQR---RH------QKIIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYF 322 (765)
Q Consensus 255 ~v-v~l~~r~~s--~~~---~~------~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~ 322 (765)
.. ..+.+..+. +.. .+ .......|+ .++++..+++.+++.++++++|++|.+++||++++ +|++||
T Consensus 226 ~~~~~~~ei~~~~~~~~~~~k~~~~~~~g~~~~~~p~-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~~-~g~~~v 303 (343)
T 1e4e_A 226 LVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVPA-DLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQD-NGRIVL 303 (343)
T ss_dssp CEECCCEEEEESSSCCCGGGSSSGGGCCSSEEECSSC-SSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECT-TCCEEE
T ss_pred eEEeeeEEEeeCCCccCHhhcccccCCCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHcCCceEEEEEEEEeC-CCCEEE
Confidence 21 112232211 111 11 112345788 59999999999999999999999999999999987 788999
Q ss_pred EEecccCCccc----cccceecCCCHHHHHHHHH
Q 041518 323 MEMNTRLQVEH----PVTEMIVDQDLVEWQIRVA 352 (765)
Q Consensus 323 iEiN~R~~~~~----~~~e~~tGvDl~~~~i~~a 352 (765)
+|+|+|++... |.....+|+|+.++..++.
T Consensus 304 iEiN~rpg~t~~s~~p~~~~~~G~~~~~l~~~li 337 (343)
T 1e4e_A 304 NEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLI 337 (343)
T ss_dssp EEEESSCCCSTTCHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEeeCCCCCCcccHHHHHHHHhCCCHHHHHHHHH
Confidence 99999998532 3334567999988877654
No 51
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=99.97 E-value=5.3e-31 Score=288.22 Aligned_cols=289 Identities=15% Similarity=0.159 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEE--------EEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC-C
Q 041518 48 IAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEA--------IRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY-G 118 (765)
Q Consensus 48 ~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~--------~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~-g 118 (765)
.|..+++++++.||+++.++.+.+.......-.+.. -.+.+.....+...... ...++.++|.|+|.. |
T Consensus 23 sa~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~v~~~lhG 100 (346)
T 3se7_A 23 SAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWEDGNCRPAVLSPDRSVHGLLVLEQ--GKYETIRLDLVLPVLHG 100 (346)
T ss_dssp HHHHHHHHSCTTTEEEEEEEECTTSCEEEESCSSSSSSSSCCEEEEECCCTTTCEEEEEET--TEEEEEECSEEEECCCS
T ss_pred HHHHHHHHhcccCCEEEEEEECCCCCEEeccchhhhhcccccccceeccCccCccceeccc--ccccccCCCEEEEccCC
Confidence 378899999999999999987755421110000000 00111000000000000 001245789999985 8
Q ss_pred cccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecCCC
Q 041518 119 FLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTHGG 198 (765)
Q Consensus 119 ~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~g~ 198 (765)
...|+..++.+++.+|++++|+++.++.++.||..+|++++++|||+|++.... +.+ ..+...+|||+||||..|+
T Consensus 101 ~~gedg~iq~~le~~gip~~g~~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~--~~~--~~~~~~lg~PvvvKP~~~~ 176 (346)
T 3se7_A 101 KLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFWTVT--ADE--KIPTDQLTYPVFVKPARSG 176 (346)
T ss_dssp TTTTSSHHHHHHHHHCCCBSSCCHHHHHHHHSHHHHHHHHHHTTCBCCCEEEEE--TTS--CCCTTTCCSSEEEEESSCC
T ss_pred CCCCChHHHHHHHHcCCCeeCcCHHHHHHHhCHHHHHHHHHHcCcCcCCEEEEc--CcH--HHHHHhcCCCEEEEeCCCC
Confidence 888999999999999999999999999999999999999999999999998665 322 2345678999999999999
Q ss_pred CCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEecccc-EEEEEeeecc------ccccce
Q 041518 199 GGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGK-VLHLYERDCS------VQRRHQ 271 (765)
Q Consensus 199 Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~-vv~l~~r~~s------~~~~~~ 271 (765)
||+|++++++.+|+.++++.+.. .+..+|||+||+ |+|+++.++.++.+. +..+.+..+. .+++..
T Consensus 177 ~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I~-G~E~~v~vl~~~~~~~~~~~~e~~~~~~~~d~~q~~~~ 249 (346)
T 3se7_A 177 SSFGVSKVAREEDLQGAVEAARE------YDSKVLIEEAVI-GTEIGCAVMGNGPELITGEVDQITLSHGFFKIHQESTP 249 (346)
T ss_dssp TTTTCEEECSHHHHHHHHHHHTT------TCSEEEEEECCC-SEEEEEEEEEETTEEEECCCEEECCC------------
T ss_pred CCcCEEEECCHHHHHHHHHHHHh------CCCcEEEEeCcC-CEEEEEEEEecCCCeEEEeeEEEecCCCCcCcccchhc
Confidence 99999999999999999987643 157999999999 699999999886542 2222232221 111122
Q ss_pred e-----eeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCcc-c---cccceecCC
Q 041518 272 K-----IIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVE-H---PVTEMIVDQ 342 (765)
Q Consensus 272 k-----~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~-~---~~~e~~tGv 342 (765)
+ .....|+ .++++..+++.+.+.++++++|++|++++||++++ +|++||+|+|+|++.. + |.....+|+
T Consensus 250 ky~~~~~~~~~pa-~l~~~~~~~i~~~a~~~~~~lg~~G~~~vD~~~~~-~g~~~vlEiN~rPG~t~~s~~p~~~~~~G~ 327 (346)
T 3se7_A 250 ESGSDNSAVTVPA-DISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLTE-DGKVVLNEVNTFPGMTSYSRYPRMMTAAGL 327 (346)
T ss_dssp --CGGGSCEESSC-CCCHHHHHHHHHHHHHHHHHHTCCEEEEEEEEECT-TSCEEEEEEESSCCCSTTCHHHHHHHHTTC
T ss_pred cccCCCeeEEeCC-CCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEeC-CCCEEEEEEeCCCCCCcccHHHHHHHHhCC
Confidence 2 2344688 69999999999999999999999999999999997 7889999999999832 2 223356899
Q ss_pred CHHHHHHHH
Q 041518 343 DLVEWQIRV 351 (765)
Q Consensus 343 Dl~~~~i~~ 351 (765)
|+.++..++
T Consensus 328 ~~~~l~~~l 336 (346)
T 3se7_A 328 SRADVIDRL 336 (346)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 988866554
No 52
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A*
Probab=99.97 E-value=8.2e-31 Score=283.90 Aligned_cols=288 Identities=21% Similarity=0.243 Sum_probs=213.6
Q ss_pred CEEEEEcCc---H--H----HHHHHHHHHHCCCeEEEEecCCCCCCcc-----cccccEEEEcCCCCcCcCCCCHHHHHH
Q 041518 38 EKILIANRG---E--I----AYRIMRTAKRLGIRTVAVYSDADRDSLH-----VKSADEAIRIGPPPARLSYLNGSSIVD 103 (765)
Q Consensus 38 kkILI~g~G---~--~----a~~iiraar~~Gi~vvav~s~~d~~~~~-----~~~aD~~~~i~~~~~~~syld~~~Il~ 103 (765)
+||+|+.+| | + +..+++++++ +++.++.+.+..... ..+++....+........ +
T Consensus 4 ~~v~vl~gg~s~E~~vSl~s~~~v~~al~~---~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-- 72 (322)
T 2fb9_A 4 MRVLLIAGGVSPEHEVSLLSAEGVLRHIPF---PTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHPFPPP------L-- 72 (322)
T ss_dssp CCEEEEEECSSTTHHHHHHHHHHHHHHCSS---CEEEEEECTTSCEECHHHHHHHTTSSCCCCCCBCSSCC------C--
T ss_pred cEEEEEeCCCchhHHHHHHHHHHHHHHhcc---CeEEEEEcCCCCEEecccchhhhccccccceecccccc------c--
Confidence 478888755 2 2 5778888877 777776554432211 022221100100000000 1
Q ss_pred HHHHhCCCEEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHH
Q 041518 104 AAIRTGAQAIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSE 182 (765)
Q Consensus 104 ~a~~~~~DaV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~ 182 (765)
+..++|+|+|.. |..+|+..++.+++..|++++|++++++.++.||..+|++++++|||+|++.... +.++ +.
T Consensus 73 --~~~~~D~v~~~~hg~~gedg~i~~~le~~gip~~g~~~~~~~~~~dK~~~k~~l~~~Gip~p~~~~~~--~~~~--~~ 146 (322)
T 2fb9_A 73 --SWERYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVAVR--KGEP--PV 146 (322)
T ss_dssp --CCTTCSEEEEECCSTTTTSSHHHHHHHHHTCCBSSCCHHHHHHHHCHHHHHHHHHHTTCCCCCEEEEE--TTSC--CC
T ss_pred --cccCCCEEEEeCCCCCCccHHHHHHHHHcCCCeeCcCHHHHHHHcCHHHHHHHHHHCCCCCCCEEEEE--Cchh--hh
Confidence 246799999996 7788998899999999999999999999999999999999999999999987654 3222 11
Q ss_pred HHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEEEEEee
Q 041518 183 AAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVLHLYER 262 (765)
Q Consensus 183 ~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv~l~~r 262 (765)
. .+|||+||||..|+||+|+.++++.+||..+++.+.. .+..+|||+||+|.+|+++.++++++++++..++.
T Consensus 147 ~-~~g~PvvvKP~~g~~s~Gv~~v~~~~el~~a~~~~~~------~~~~vlvEe~I~G~~E~~v~vl~~~~~~~~~~~ei 219 (322)
T 2fb9_A 147 V-PFDPPFFVKPANTGSSVGISRVERFQDLEAALALAFR------YDEKAVVEKALSPVRELEVGVLGNVFGEASPVGEV 219 (322)
T ss_dssp C-CSCSCEEEEETTCCTTTTCEEESSHHHHHHHHHHHTT------TCSEEEEEECCSSCEEEEEEEESSSSCEEEEEEEE
T ss_pred h-ccCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHHh------cCCeEEEEeCCCCCeeEEEEEEeCCCceEeeeEEE
Confidence 2 7899999999999999999999999999999887643 15799999999954999999998765555555544
Q ss_pred e--ccccccceee-----eeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccc--
Q 041518 263 D--CSVQRRHQKI-----IEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEH-- 333 (765)
Q Consensus 263 ~--~s~~~~~~k~-----~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~-- 333 (765)
. +.+.+...++ ....|+ .++++..+++.+.+.++++++|++|.+++||+++ +|++||+|+|+|++...
T Consensus 220 ~~~~~~~~~~~k~~~g~~~~~~Pa-~l~~~~~~~i~~~a~~~~~alg~~G~~~vD~~~~--~g~~~vlEiN~rpg~t~~s 296 (322)
T 2fb9_A 220 RYEAPFYDYETKYTPGRAELLIPA-PLDPGTQETVQELALKAYKVLGVRGMARVDFFLA--EGELYLNELNTIPGFTPTS 296 (322)
T ss_dssp EEECCEEETTTEEECCEEEEESSC-CCCTTHHHHHHHHHHHHHHHHTCCSEEEEEEEEE--TTEEEEEEEESSCCCSSSC
T ss_pred eeCCCccCHHHcccCCCeEEEeCC-CCCHHHHHHHHHHHHHHHHHhCCceEEEEEEEEE--CCcEEEEEEECCCCCCccc
Confidence 3 1222222222 234688 6899999999999999999999999999999999 78899999999998432
Q ss_pred --cccceecCCCHHHHHHHHH
Q 041518 334 --PVTEMIVDQDLVEWQIRVA 352 (765)
Q Consensus 334 --~~~e~~tGvDl~~~~i~~a 352 (765)
|.....+|+|+.+++.++.
T Consensus 297 ~~p~~~~~~G~~~~~l~~~li 317 (322)
T 2fb9_A 297 MYPRLFEAGGVAYPELLRRLV 317 (322)
T ss_dssp HHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHH
Confidence 2223467999888766553
No 53
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=99.97 E-value=2.8e-29 Score=276.40 Aligned_cols=233 Identities=16% Similarity=0.171 Sum_probs=182.9
Q ss_pred CCCEEEeC-CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhC
Q 041518 109 GAQAIHPG-YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIG 187 (765)
Q Consensus 109 ~~DaV~pg-~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig 187 (765)
++|+|+|. .|...|+..++.+++..|++++|++++++.++.||..+|++|+++|||+|++......+.+++.+ ++.+|
T Consensus 107 ~~D~v~~~lhg~~gedg~i~~~le~~gip~~G~~~~a~~~~~DK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~-~~~lg 185 (367)
T 2pvp_A 107 ELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEASVLSYNKYLTKLYAKDLGIKTLDYVLLNEKNRANALD-LMNFN 185 (367)
T ss_dssp ECCSEEECCCSTTTTSSHHHHHHHHTTCCEESCCHHHHHHHHSHHHHHHHHHHHTCBCCCCEEECTTTGGGHHH-HCCSC
T ss_pred CCCEEEEcCCCCCccHHHHHHHHHHcCCCccCCCHHHHHHHcCHHHHHHHHHHCCcCCCCEEEEeCCchHHHHH-HhccC
Confidence 68999998 46678888899999999999999999999999999999999999999999987655222225555 67899
Q ss_pred CcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEE-EEEEEeccccEEEEEeeecc-
Q 041518 188 YPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIE-VQIFGDKYGKVLHLYERDCS- 265 (765)
Q Consensus 188 ~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~-v~v~~d~~g~vv~l~~r~~s- 265 (765)
||+||||..|+||.|+.++++.+||.++++.+.. + +..+|||+||+|.+|++ +.+.. +|+++....+-..
T Consensus 186 ~PvvVKP~~g~ss~Gv~~v~~~~el~~a~~~~~~-----~-~~~vlVEe~I~G~~E~svi~v~v--~g~~~~~~~ei~~~ 257 (367)
T 2pvp_A 186 FPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFE-----Y-SKEVLIEPFIQGVKEYNLAGCKI--KKDFCFSYIEEPNK 257 (367)
T ss_dssp SCEEEEESSCCTTTTCEEESSTTSHHHHHHHHTT-----T-CSCEEEEECCTTCEEEEEEEEEE--TTEEEEEEEEETTT
T ss_pred CCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHh-----c-CCcEEEEeCCCCCceeeEEEEEE--CCEEEEEEEEEecC
Confidence 9999999999999999999999999999887643 2 57999999999548955 44444 3443333221111
Q ss_pred --ccccceeee-----eecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCcc-ccccc
Q 041518 266 --VQRRHQKII-----EEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVE-HPVTE 337 (765)
Q Consensus 266 --~~~~~~k~~-----e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~-~~~~e 337 (765)
+.....++. ...|+ .++++..+++.+++.++++++|+.|++++||+++ +|++||+|+|||++.. +.+..
T Consensus 258 ~~~~d~~~ky~~g~~~~~~Pa-~l~~~~~~~i~~~a~~~~~aLg~~G~~~vDf~~~--~g~~~vlEiN~rpg~t~~s~~p 334 (367)
T 2pvp_A 258 QEFLDFKQKYLDFSRNKAPKA-SLSNALEEQLKENFKKLYSDLFDGAIIRCDFFVI--ENEVYLNEINPIPGSLANYLFD 334 (367)
T ss_dssp TEEECCCCSSCCSCCCSCCCC-CCCHHHHHHHHHHHHHHHTTTSTTCCEEEEEEEE--TTEEEEEEEESSCGGGGGGGSS
T ss_pred CceEcccccccCCCeeEEecC-CCCHHHHHHHHHHHHHHHHHcCCCCEEEEEEEEE--CCeEEEEEEeCCCCCCcccccC
Confidence 111112221 34688 6999999999999999999999999999999999 7889999999999742 22222
Q ss_pred eecCCCHHHHHHHHHcCCCCC
Q 041518 338 MIVDQDLVEWQIRVANGEPLP 358 (765)
Q Consensus 338 ~~tGvDl~~~~i~~a~G~~l~ 358 (765)
|+.++..++..+.++.
T Consensus 335 -----~~~~l~~~li~~~~~~ 350 (367)
T 2pvp_A 335 -----DFKTTLENLAQSLPKT 350 (367)
T ss_dssp -----SHHHHHHHHHHHCC--
T ss_pred -----CHHHHHHHHHhCcccc
Confidence 8899988888876553
No 54
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Probab=99.96 E-value=6.6e-29 Score=261.91 Aligned_cols=272 Identities=17% Similarity=0.201 Sum_probs=198.2
Q ss_pred EEEEcC--cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCC-EEEeC
Q 041518 40 ILIANR--GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQ-AIHPG 116 (765)
Q Consensus 40 ILI~g~--G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~D-aV~pg 116 (765)
|+|++. +..+..++++++++|++++.++.+++. ..++|. + ....++| ++++.
T Consensus 2 I~il~~~~~~~~~~~~~a~~~~G~~v~~~~~~~~~----~~~~~~------------~---------~~~~~~d~~~~~~ 56 (280)
T 1uc8_A 2 LAILYDRIRPDERMLFERAEALGLPYKKVYVPALP----MVLGER------------P---------KELEGVTVALERC 56 (280)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCEEEEEGGGCC----EETTBC------------C---------GGGTTCCEEEECC
T ss_pred EEEEecCCCHHHHHHHHHHHHcCCcEEEEehhhce----eeccCC------------C---------cccCCCCEEEECC
Confidence 788874 567889999999999999998765443 112221 1 1124689 78877
Q ss_pred CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecC
Q 041518 117 YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTH 196 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~ 196 (765)
++.. ++..++..++..|+++++ +++++..+.||..++++++++|+|+|++.... +.+++.+++++++||+|+||..
T Consensus 57 ~~~~-~~~~~~~~l~~~g~~~~~-~~~~~~~~~dK~~~~~~l~~~gi~~p~~~~~~--~~~~~~~~~~~~~~p~vvKp~~ 132 (280)
T 1uc8_A 57 VSQS-RGLAAARYLTALGIPVVN-RPEVIEACGDKWATSVALAKAGLPQPKTALAT--DREEALRLMEAFGYPVVLKPVI 132 (280)
T ss_dssp SSHH-HHHHHHHHHHHTTCCEES-CHHHHHHHHBHHHHHHHHHHTTCCCCCEEEES--SHHHHHHHHHHHCSSEEEECSB
T ss_pred ccch-hhHHHHHHHHHCCCceeC-CHHHHHHhCCHHHHHHHHHHcCcCCCCeEeeC--CHHHHHHHHHHhCCCEEEEECC
Confidence 6532 556788889999999984 69999999999999999999999999987655 8889999999999999999999
Q ss_pred CCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCC-CeeEEEEEEEeccccEEEEEeeecc-ccccceeee
Q 041518 197 GGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQ-PRHIEVQIFGDKYGKVLHLYERDCS-VQRRHQKII 274 (765)
Q Consensus 197 g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~g-grei~v~v~~d~~g~vv~l~~r~~s-~~~~~~k~~ 274 (765)
|+||+|++++++.+|+..+++.+.. ...+...++++|+||+| +.|+++.++. |+++....+... +........
T Consensus 133 g~~~~gv~~v~~~~el~~~~~~~~~--~~~~~~~~~lvqe~i~~~~~e~~v~v~~---~~~~~~~~~~~~~~~~~~~~g~ 207 (280)
T 1uc8_A 133 GSWGRLLAXXXXXXXXXXXXXXKEV--LGGFQHQLFYIQEYVEKPGRDIRVFVVG---ERAIAAIYRRSAHWITNTARGG 207 (280)
T ss_dssp CCBCSHHHHHHHHHC--------------CTTTTCEEEEECCCCSSCCEEEEEET---TEEEEEEEC-------------
T ss_pred CCCcccceecccccccchhhhhHhh--hcccCCCcEEEEeccCCCCceEEEEEEC---CEEEEEEEEecCCccccccCCc
Confidence 9999999999999999988876511 11122579999999997 6778777763 344443332100 100000111
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcC
Q 041518 275 EEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANG 354 (765)
Q Consensus 275 e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G 354 (765)
...|. .+++ ++.+.+.++++++|+ |.+++||++++ +| +||+|+|||++... ++..+|+|+.+++++.++|
T Consensus 208 ~~~p~-~l~~----~~~~~~~~~~~~lg~-g~~~vD~~~~~-~g-~~~iEiN~r~g~~~--~~~~~G~~~~~~~~~~~~~ 277 (280)
T 1uc8_A 208 QAENC-PLTE----EVARLSVKAAEAVGG-GVVAVDLFESE-RG-LLVNEVNHTMEFKN--SVHTTGVDIPGEILKYAWS 277 (280)
T ss_dssp -CEEC-CCCH----HHHHHHHHHHHHTTC-SEEEEEEEEET-TE-EEEEEEETTCCCTT--HHHHHCCCHHHHHHHHHHH
T ss_pred cccCC-CCCH----HHHHHHHHHHHHhCC-CeEEEEEEEeC-CC-eEEEEEeCCCCccc--hheeeccCHHHHHHHHHHh
Confidence 12355 3443 789999999999999 99999999996 54 99999999997443 5778999999999999887
Q ss_pred C
Q 041518 355 E 355 (765)
Q Consensus 355 ~ 355 (765)
+
T Consensus 278 ~ 278 (280)
T 1uc8_A 278 L 278 (280)
T ss_dssp T
T ss_pred h
Confidence 5
No 55
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=99.95 E-value=5.6e-27 Score=253.91 Aligned_cols=264 Identities=17% Similarity=0.190 Sum_probs=185.7
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCC-CcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRD-SLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~-~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
.||||+|+| .+..++++++++|+++++++.+.+.. .....++|+.+.++. |.+ +.+ + ..+|+|+|.
T Consensus 3 m~Ililg~g-~~~~l~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d-~~l---~--~~~d~i~~~ 69 (334)
T 2r85_A 3 VRIATYASH-SALQILKGAKDEGFETIAFGSSKVKPLYTKYFPVADYFIEEK------YPE-EEL---L--NLNAVVVPT 69 (334)
T ss_dssp SEEEEESST-THHHHHHHHHHTTCCEEEESCGGGHHHHHTTSCCCSEEECSS------CCH-HHH---H--HTTEEECCC
T ss_pred eEEEEECCh-hHHHHHHHHHhCCCEEEEEECCCCCcccccccccCceEecCC------cCh-HHh---c--ccCCEEEEC
Confidence 489999999 89999999999999999887654321 113456777665431 332 222 2 235888876
Q ss_pred CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecC
Q 041518 117 YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTH 196 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~ 196 (765)
..+.. ......++..|++++ ++++++..+.||..++++++++|||+|++ . .+.++ ++||+||||..
T Consensus 70 ~e~~~--~~~~~~le~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gip~p~~--~--~~~~~-------l~~P~vvKP~~ 135 (334)
T 2r85_A 70 GSFVA--HLGIELVENMKVPYF-GNKRVLRWESDRNLERKWLKKAGIRVPEV--Y--EDPDD-------IEKPVIVKPHG 135 (334)
T ss_dssp TTHHH--HHCHHHHHTCCSCBB-SCTTHHHHHHSHHHHHHHHHHTTCCCCCB--C--SCGGG-------CCSCEEEEECC
T ss_pred cchhh--hhHHHHHHHcCCCcc-CCHHHHHHHHhHHHHHHHHHHcCCCCCCc--c--CChHH-------cCCCEEEEeCC
Confidence 43221 122345688999976 56799999999999999999999999997 2 25443 57999999999
Q ss_pred CCCCccEEEECChhHHHHHHHHHHHHHHhcCC-CCcEEEecccCCCeeEEEEEEEecccc-EEEEE-eeecccc-----c
Q 041518 197 GGGGKGMRIVQSPNDFVDSFLGAQREAAASFG-INTILLEKYITQPRHIEVQIFGDKYGK-VLHLY-ERDCSVQ-----R 268 (765)
Q Consensus 197 g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg-~~~vlVEeyI~ggrei~v~v~~d~~g~-vv~l~-~r~~s~~-----~ 268 (765)
|+||+|++++++.+|+..+++.+.... .|. ...+|||+||+ |.++++.++.+..++ +-.+. +..+..+ +
T Consensus 136 g~~s~Gv~~v~~~~el~~~~~~~~~~~--~~~~~~~~lvee~i~-G~e~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~~ 212 (334)
T 2r85_A 136 AKGGKGYFLAKDPEDFWRKAEKFLGIK--RKEDLKNIQIQEYVL-GVPVYPHYFYSKVREELELMSIDRRYESNVDAIGR 212 (334)
T ss_dssp ----TTCEEESSHHHHHHHHHHHHCCC--SGGGCCSEEEEECCC-CEEEEEEEEEETTTTEEEEEEEEEEEEEEGGGGGG
T ss_pred CCCCCCEEEECCHHHHHHHHHHHHhhc--ccCCCCcEEEEeccC-CceeEEEEeecCcCceeeeeeeccEEEeccCcccc
Confidence 999999999999999999887764310 111 36899999999 578887776653222 22111 1111110 0
Q ss_pred -----cc----eeeeeec---CCCCCCHHHHHHHHHHHHHHHHHc-----CCCceeEEEEEEECCCCcEEEEEecccCCc
Q 041518 269 -----RH----QKIIEEA---PAPNVTHDFRALLGQAAVSAAKAV-----SYHNAGTVEFIVDTVSDQFYFMEMNTRLQV 331 (765)
Q Consensus 269 -----~~----~k~~e~~---Pa~~l~~~~~~~l~~~a~~i~~al-----g~~G~~~vEf~~~~~~g~~~~iEiN~R~~~ 331 (765)
.. ....... |+ .++++..+++.+++.++++++ ++.|++++||++++ +|++||+|+|||+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~g~~p~-~l~~~~~~~i~~~a~~~~~~l~~~~~~~~G~~~vd~~~~~-~g~~~viEiN~R~g~ 290 (334)
T 2r85_A 213 IPAKDQLEFDMDITYTVIGNIPI-VLRESLLMDVIEAGERVVKAAEELMGGLWGPFCLEGVFTP-DLEFVVFEISARIVA 290 (334)
T ss_dssp SCHHHHTTSCCCCCEEEEEEEEC-CCCGGGHHHHHHHHHHHHHHHHHHSSCCCEEEEEEEEECT-TSCEEEEEEECSCCG
T ss_pred cccccccccccCCceeeeCCCCc-ccCHHHHHHHHHHHHHHHHHHHhhcccccccEEEEEEECC-CCCEEEEEEeCCcCC
Confidence 00 0011122 77 588888999999999999999 88999999999997 788999999999997
Q ss_pred cc
Q 041518 332 EH 333 (765)
Q Consensus 332 ~~ 333 (765)
+.
T Consensus 291 ~~ 292 (334)
T 2r85_A 291 GT 292 (334)
T ss_dssp GG
T ss_pred Cc
Confidence 43
No 56
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=99.94 E-value=6.7e-26 Score=247.94 Aligned_cols=271 Identities=13% Similarity=0.158 Sum_probs=191.7
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCC-CcccccccEEEEcCCCCcCcCCCCH--HHHHHHHHHhCCCEEE
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRD-SLHVKSADEAIRIGPPPARLSYLNG--SSIVDAAIRTGAQAIH 114 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~-~~~~~~aD~~~~i~~~~~~~syld~--~~Il~~a~~~~~DaV~ 114 (765)
.+|+|+|+| .++.++++|+++|++|++++.+++.. .....+||+.+.++ .|.|. +++++.+++.+ +.|.
T Consensus 19 ~~I~ilGs~-l~~~l~~aAk~lG~~vi~vd~~~~~p~~~~~~~ad~~~~~d------~~~d~~~~~~l~~l~~~~-~vV~ 90 (361)
T 2r7k_A 19 ITIATLGSH-TSLHILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVD------NFSDIKNEEIQEKLRELN-SIVV 90 (361)
T ss_dssp CEEEEESST-THHHHHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECS------SGGGGGSHHHHHHHHHTT-EEEC
T ss_pred CEEEEECcH-HHHHHHHHHHHCCCEEEEEECCCCCCcccccccCceEEECC------CcccccHHHHHHHHHHcC-CEEE
Confidence 369999999 89999999999999999987665421 12667899988753 24442 56666666654 5544
Q ss_pred eCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEee
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKP 194 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP 194 (765)
|-.. +.....+..+.++.|++++| +..++....||..+|++|+++|||+|+++ . +.+++ +||+||||
T Consensus 91 pe~~-~v~~~gl~~l~~~~g~~v~g-~~~a~~~e~~k~~~k~~l~~~GIptp~~~--~--~~~e~-------~~PvVVK~ 157 (361)
T 2r7k_A 91 PHGS-FIAYCGLDNVENSFLVPMFG-NRRILRWESERSLEGKLLREAGLRVPKKY--E--SPEDI-------DGTVIVKF 157 (361)
T ss_dssp CBHH-HHHHHCHHHHHHTCCSCBBS-CGGGGGTTTCHHHHHHHHHHTTCCCCCEE--S--SGGGC-------CSCEEEEC
T ss_pred eCch-hhhHHHHHHHHHHcCCCcCC-CHHHHHHhhhHHHHHHHHHHcCcCCCCEe--C--CHHHc-------CCCEEEee
Confidence 3210 11001222334489999887 88899999999999999999999999863 2 55543 69999999
Q ss_pred cCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCC---CcEEEecccCCCeeEEEEEEEec-ccc--EEEEEeee-----
Q 041518 195 THGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGI---NTILLEKYITQPRHIEVQIFGDK-YGK--VLHLYERD----- 263 (765)
Q Consensus 195 ~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~---~~vlVEeyI~ggrei~v~v~~d~-~g~--vv~l~~r~----- 263 (765)
..++||+|+++++|.+|+.++++.+... ..|+. ..++|||||+| .++++..+..- +++ ++.+-.|-
T Consensus 158 ~~~a~GkGv~v~~s~ee~~~a~~~~~~~--~~~~~~~~~~viIEEfl~G-~e~s~~~f~~~~~~~~e~~~id~r~~~~~d 234 (361)
T 2r7k_A 158 PGARGGRGYFIASSTEEFYKKAEDLKKR--GILTDEDIANAHIEEYVVG-TNFCIHYFYSPLKDEVELLGMDKRYESNID 234 (361)
T ss_dssp SCCCC---EEEESSHHHHHHHHHHHHHT--TSCCHHHHHHCEEEECCCS-EEEEEEEEEETTTTEEEEEEEEEEEEEEHH
T ss_pred CCCCCCCCEEEECCHHHHHHHHHHHHhc--cccccCCCCeEEEEeccce-EEeeEEEEecccCCeeEEEEecceEEeecc
Confidence 9999999999999999999999877532 11211 47999999995 66676665542 222 22222221
Q ss_pred --cccc----------ccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHc------CCCceeEEEEEEECCCCcEEEEEe
Q 041518 264 --CSVQ----------RRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAV------SYHNAGTVEFIVDTVSDQFYFMEM 325 (765)
Q Consensus 264 --~s~~----------~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~al------g~~G~~~vEf~~~~~~g~~~~iEi 325 (765)
|.+. ..+....+ .|+ .+++++.+++.+++.++++++ |+.|++++||++++ +|+++++|+
T Consensus 235 gi~~~~~~~~~~~~~~p~~v~~G~-~Pa-~l~~~~~~~a~~~a~~v~~al~~~~~~~~~G~~~vE~fvt~-dg~i~V~EI 311 (361)
T 2r7k_A 235 GLVRIPAKDQLEMNINPSYVITGN-IPV-VIRESLLPQVFEMGDKLVAKAKELVPPGMIGPFCLQSLCNE-NLELVVFEM 311 (361)
T ss_dssp HHTTSCHHHHHTCCCCCCEEEEEE-EEC-CCCGGGHHHHHHHHHHHHHHHHHHSTTCCCEEEEEEEEECT-TSCEEEEEE
T ss_pred cceecchhhhhcccCCCceEEecC-cCC-cCCHHHHHHHHHHHHHHHHHHHhhccCCccceEEEEEEEcC-CCCEEEEEE
Confidence 1010 00111111 288 688999999999999999999 89999999999997 788999999
Q ss_pred cccCCccccc
Q 041518 326 NTRLQVEHPV 335 (765)
Q Consensus 326 N~R~~~~~~~ 335 (765)
|||++++.++
T Consensus 312 apR~gGg~~~ 321 (361)
T 2r7k_A 312 SARVDGGTNS 321 (361)
T ss_dssp ESSBCGGGGG
T ss_pred cCCCCCCccc
Confidence 9999977444
No 57
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=99.92 E-value=1.9e-25 Score=240.06 Aligned_cols=263 Identities=12% Similarity=0.102 Sum_probs=178.0
Q ss_pred EEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCC-CCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC
Q 041518 39 KILIANRGEIAYRIMRTAKRLGIRTVAVYSDADR-DSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY 117 (765)
Q Consensus 39 kILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~-~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~ 117 (765)
+|.++|+| .++.++++|+++|++|++++.+++. ..+...+||+.+.++. |.| ++ ...|.|.|-.
T Consensus 4 ~I~~lGsg-l~~~~~~aAk~lG~~viv~d~~~~~p~~~a~~~ad~~~~~~~------~~d------l~--~~~dvitpe~ 68 (320)
T 2pbz_A 4 IVSTIASH-SSLQILLGAKKEGFKTRLYVSPKRRPFYSSLPIVDDLVVAEE------MTS------IL--NDDGIVVPHG 68 (320)
T ss_dssp CEEEESST-THHHHHHHHHHTTCCEEEEECTTTHHHHHTCTTCSEEEECSC------SCC------TT--CCSSBCCCBT
T ss_pred EEEEEcCH-hHHHHHHHHHHCCCEEEEEECCCCCccchhhhcCCeEEECCc------HHH------HH--hcCCEEEecc
Confidence 59999999 9999999999999999998765443 1126778999887642 444 22 2347776543
Q ss_pred CcccccHHH--HHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeec
Q 041518 118 GFLSESADF--AQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPT 195 (765)
Q Consensus 118 g~lsE~~~~--a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~ 195 (765)
|+... .+.+++.|++++ |+++++....||...|++|+++|||+|+++. . +++ +++||+||||.
T Consensus 69 ----e~v~~~~l~~le~~~~p~~-p~~~~l~~~~dr~~~~~~l~~~Gip~P~~~~-~----ee~-----~i~~PviVKp~ 133 (320)
T 2pbz_A 69 ----SFVAYLGIEAIEKAKARFF-GNRRFLKWETTFELQDKALEGAGIPRVEVVE-P----EDA-----KPDELYFVRIE 133 (320)
T ss_dssp ----THHHHSCHHHHHTCCSCCB-SCSSGGGGGSCHHHHHHHHHHHTCCBCCBCC-S----CCC-----CSSCCEEEECC
T ss_pred ----cchhHHHHHHHHHcCCCcC-CCHHHHHHHHhHHHHHHHHHHCCcCCCCeeC-H----hHc-----CcCCcEEEEEC
Confidence 32222 234678999977 6788999999999999999999999999873 2 222 58999999999
Q ss_pred CCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEe-ccccEEEEEeee-cccccccee-
Q 041518 196 HGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGD-KYGKVLHLYERD-CSVQRRHQK- 272 (765)
Q Consensus 196 ~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d-~~g~vv~l~~r~-~s~~~~~~k- 272 (765)
+|+||+|+++++| +|+..+++.+ . .+++|||||+|. ++++.++.+ -.|++..++.++ +.. .....
T Consensus 134 ~g~ggkG~~~v~~-eel~~~~~~~--------~-~~~IiEEfI~g~-~~~~~~f~~~~~g~~e~~~~~~r~e~-~~g~~~ 201 (320)
T 2pbz_A 134 GPRGGSGHFIVEG-SELEERLSTL--------E-EPYRVERFIPGV-YLYVHFFYSPILERLELLGVDERVLI-ADGNAR 201 (320)
T ss_dssp ------------C-EECSCCCC-------------CCEEEECCCSC-EEEEEEEEETTTTEEEEEEEEEEEET-TCSSSS
T ss_pred CCCCCCCEEEECh-HHHHHHHHhc--------C-CCEEEEeeeceE-ecceeEEeccccCceeEEEecceEEE-ECCeee
Confidence 9999999999999 9998766443 1 489999999964 456666665 345555543322 111 11100
Q ss_pred --------eee-ecCCCCCCHHHHHHHHHHHHHHHHHc------CCCceeEEEEEEECCCCcEEEEEecccCCcc----c
Q 041518 273 --------IIE-EAPAPNVTHDFRALLGQAAVSAAKAV------SYHNAGTVEFIVDTVSDQFYFMEMNTRLQVE----H 333 (765)
Q Consensus 273 --------~~e-~~Pa~~l~~~~~~~l~~~a~~i~~al------g~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~----~ 333 (765)
... ..|+ .+++++.+++.+++.++++++ |+.|++++| +++ +|++|++|||||++++ +
T Consensus 202 ~p~~~~~~~~~G~~P~-~~~~~~~~~a~~~a~~i~~~L~~l~~~g~~G~~~vE--~~~-dg~~~v~EIapR~~GGt~~~~ 277 (320)
T 2pbz_A 202 WPVKPLPYTIVGNRAI-ALRESLLPQLYDYGLAFVRTMRELEPPGVIGPFALH--FAY-DGSFKAIGIASRIDGGSNADH 277 (320)
T ss_dssp SCCSCCCCCEEEEEEC-EECGGGHHHHHHHHHHHHHHHHHHSTTCCCSEEEEE--EEC-SSSCEEEEEESSBCSGGGSCC
T ss_pred cccCCCceeeecCCCC-ccCHHHHHHHHHHHHHHHHHHHhhccCCceeeEEEE--EcC-CCcEEEEEecCCCCCCCCccC
Confidence 111 1277 578888899999999999999 999999999 565 7889999999999976 4
Q ss_pred ccccee--cCCCHHHH
Q 041518 334 PVTEMI--VDQDLVEW 347 (765)
Q Consensus 334 ~~~e~~--tGvDl~~~ 347 (765)
|.+-.. -+++.-+.
T Consensus 278 ~y~~~~~~~~~~~g~r 293 (320)
T 2pbz_A 278 WYSELYWGERLSMGRR 293 (320)
T ss_dssp CCHHHHSSSCCCHHHH
T ss_pred CceeeeecCCCCHHHH
Confidence 543332 25554443
No 58
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus}
Probab=99.91 E-value=4.2e-24 Score=229.46 Aligned_cols=209 Identities=15% Similarity=0.129 Sum_probs=160.7
Q ss_pred HHHHHHHHHhCCCEEEeC-CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHH
Q 041518 99 SSIVDAAIRTGAQAIHPG-YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDID 177 (765)
Q Consensus 99 ~~Il~~a~~~~~DaV~pg-~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~ 177 (765)
+.+.+.+ .++|.+++. ++.......+.+.++..| +++|+++++++.+.||..+++++++ |||+|+++.
T Consensus 61 ~~l~~~~--~~~D~~~~i~~~ed~~l~~~~~~l~~~g-~~~g~~~~~~~~~~dK~~~~~~l~~-Gip~p~~~~------- 129 (305)
T 3df7_A 61 DSMEKYL--EKSDAFLIIAPEDDFLLYTLTKKAEKYC-ENLGSSSRAIAVTSDKWELYKKLRG-EVQVPQTSL------- 129 (305)
T ss_dssp GGHHHHH--TTCSEEEEECCCGGGHHHHHHHHHHTTS-EESSCCHHHHHHHTSHHHHHHHHTT-TSCCCCEES-------
T ss_pred HHHHHHH--HhcCEEEEEccCCcHHHHHHHHHHHhcC-CccCCCHHHHHHhcCHHHHHHHHHh-CCCCCCEec-------
Confidence 4566666 467776654 221111134556666667 7999999999999999999999999 999999863
Q ss_pred HHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccEE
Q 041518 178 LMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKVL 257 (765)
Q Consensus 178 e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~vv 257 (765)
..++||+|+||..|+||+|++++++ .+..+++|+||+ |+|+++.++.++ .+.
T Consensus 130 ------~~~~~P~vvKP~~g~gs~Gv~~v~~-------------------~~~~~lvEe~I~-G~e~sv~v~~g~--~~~ 181 (305)
T 3df7_A 130 ------RPLDCKFIIKPRTACAGEGIGFSDE-------------------VPDGHIAQEFIE-GINLSVSLAVGE--DVK 181 (305)
T ss_dssp ------SCCSSSEEEEESSCC----CBCCSS-------------------CCTTEEEEECCC-SEEEEEEEEESS--SEE
T ss_pred ------ccCCCCEEEEeCCCCCCCCEEEEec-------------------CCCCEEEEeccC-CcEEEEEEEeCC--eEE
Confidence 1578999999999999999999998 157999999999 699999999742 444
Q ss_pred EEEeeeccccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHc-CCCceeEEEEEEECCCCcEEEEEecccCCcccccc
Q 041518 258 HLYERDCSVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAV-SYHNAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVT 336 (765)
Q Consensus 258 ~l~~r~~s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~al-g~~G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~ 336 (765)
.+.... .....+.......|+ .++++..+++.+++.++++++ |++|++++||+++ |++||+|||||++++....
T Consensus 182 ~~~~~~-~~~~~~~~~g~~~p~-~l~~~~~~~i~~~a~~~~~~l~g~~G~~~vD~~~~---~~~~viEiNpR~~~~~~~~ 256 (305)
T 3df7_A 182 CLSVNE-QIINNFRYAGAVVPA-RISDEVKREVVEEAVRAVECVEGLNGYVGVDIVYS---DQPYVIEINARLTTPVVAF 256 (305)
T ss_dssp EEEEEE-EEEETTEEEEEEESC-CCCHHHHHHHHHHHHHHHTTSTTCCEEEEEEEEES---SSEEEEEEESSCCGGGGGH
T ss_pred EEEEee-EeccCceeccccccC-CCCHHHHHHHHHHHHHHHHHcCCCcCceEEEEEEC---CCEEEEEEcCCCCCCHHHH
Confidence 443211 111112223345687 689999999999999999999 9999999999995 5699999999999777777
Q ss_pred ceecCCCHHHHHHHH
Q 041518 337 EMIVDQDLVEWQIRV 351 (765)
Q Consensus 337 e~~tGvDl~~~~i~~ 351 (765)
+.++|+|+.++++++
T Consensus 257 ~~~~G~~~~~~~~~~ 271 (305)
T 3df7_A 257 SRAYGASVADLLAGG 271 (305)
T ss_dssp HHHHSCCHHHHHTTC
T ss_pred HHHHCCCHHHHHHhc
Confidence 888999999999998
No 59
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=99.86 E-value=9.5e-21 Score=202.77 Aligned_cols=284 Identities=12% Similarity=0.044 Sum_probs=183.3
Q ss_pred CEEEEEcCc--------HHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccE-EEEcCCCCcCcCCCC--HHHHHHHHH
Q 041518 38 EKILIANRG--------EIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADE-AIRIGPPPARLSYLN--GSSIVDAAI 106 (765)
Q Consensus 38 kkILI~g~G--------~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~-~~~i~~~~~~~syld--~~~Il~~a~ 106 (765)
.||+|+..+ ..+..++++++++|++++.++.+..........++. .+.+... .+.+.. .+.++.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--- 76 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLINGEARAHTRTLNVKQN--YEEWFSFVGEQDLP--- 76 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGGEEEETTEEEEEEEEEEECSC--SSCCEEEEEEEEEE---
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhHeEEECCeEEEEEeeeEeccC--cccceeccCccccc---
Confidence 367777766 346889999999999999887542221111111221 1112110 111111 000111
Q ss_pred HhCCCEEEeCCCccc-c-c---HHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHH
Q 041518 107 RTGAQAIHPGYGFLS-E-S---ADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKS 181 (765)
Q Consensus 107 ~~~~DaV~pg~g~ls-E-~---~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~ 181 (765)
..++|+|++....-. + . ..+.+.++..|++++ ++++++..+.||..++++++ |+|++.... +.+++.+
T Consensus 77 ~~~~d~v~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~dK~~~~~~l~----~~P~t~~~~--~~~~~~~ 149 (316)
T 1gsa_A 77 LADLDVILMRKDPPFDTEFIYATYILERAEEKGTLIV-NKPQSLRDCNEKLFTAWFSD----LTPETLVTR--NKAQLKA 149 (316)
T ss_dssp GGGSSEEEECCCCCCCHHHHHHHHHHHHHHHTTCEEE-SCHHHHHHCCTTGGGGGGTT----TSCCEEEES--CHHHHHH
T ss_pred cccCCEEEEecCCCCchhhHHHHHHHHHHHHcCCeEe-cCHHHHHhhhhHHHHHhhhh----cCCCeEEeC--CHHHHHH
Confidence 146899998753221 1 1 245566778999877 78999999999999999987 999987654 8889999
Q ss_pred HHHHhCCcEEEeecCCCCCccEEEEC-ChhHHHHHHHHHHHHHHhcCCCCcEEEecccCC--CeeEEEEEEEeccccEEE
Q 041518 182 EAAKIGYPILIKPTHGGGGKGMRIVQ-SPNDFVDSFLGAQREAAASFGINTILLEKYITQ--PRHIEVQIFGDKYGKVLH 258 (765)
Q Consensus 182 ~~~~ig~PvVVKP~~g~Gg~Gv~~v~-s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~g--grei~v~v~~d~~g~vv~ 258 (765)
+++++| |+|+||..|+||+|+++++ +.+++..+++.+.. .+..++++|+||++ +.++++.++ +|+++.
T Consensus 150 ~~~~~~-p~vvKP~~g~~g~Gv~~v~~~~~~l~~~~~~~~~-----~~~~~~lvqe~i~~~~~~~~~v~~~---~g~~~~ 220 (316)
T 1gsa_A 150 FWEKHS-DIILKPLDGMGGASIFRVKEGDPNLGVIAETLTE-----HGTRYCMAQNYLPAIKDGDKRVLVV---DGEPVP 220 (316)
T ss_dssp HHHHHS-SEEEECSSCCTTTTCEEECTTCTTHHHHHHHHTT-----TTTSCEEEEECCGGGGGCEEEEEEE---TTEECS
T ss_pred HHHHcC-CEEEEECCCCCcccEEEecCChHHHHHHHHHHHh-----cCCceEEEecccCCCCCCCEEEEEE---CCEEee
Confidence 888899 9999999999999999998 89999887765421 22468999999997 345555443 244444
Q ss_pred -EEeeecc---ccccceeeeeecCCCCCCHHHHHHHHHHHHHHH---HHcCCCceeEEEEEEECCCCcEEEEEecccCCc
Q 041518 259 -LYERDCS---VQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAA---KAVSYHNAGTVEFIVDTVSDQFYFMEMNTRLQV 331 (765)
Q Consensus 259 -l~~r~~s---~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~---~alg~~G~~~vEf~~~~~~g~~~~iEiN~R~~~ 331 (765)
...|... +...+.......|. .++++ +.+.+.+++ +++|+ +.+.+||+ | +||||+|+|.+.
T Consensus 221 ~~~~r~~~~~~~~~~~~~gg~~~~~-~~~~~----~~~~a~~~~~~l~~~g~-~~~~vD~~-----g-~~~iEvN~r~~~ 288 (316)
T 1gsa_A 221 YCLARIPQGGETRGNLAAGGRGEPR-PLTES----DWKIARQIGPTLKEKGL-IFVGLDII-----G-DRLTEINVTSPT 288 (316)
T ss_dssp EEEEEECCSSCSCCCGGGTCEEEEE-ECCHH----HHHHHHHHHHHHHHTTC-CEEEEEEE-----T-TEEEEEECSSCC
T ss_pred eEEEEeCCCCCceeEEccCCccccC-CCCHH----HHHHHHHHHHHHHhCCC-cEEEEEec-----C-CEEEEEcCCCCc
Confidence 3333211 11110001112344 34543 344555555 45687 67889998 3 389999999643
Q ss_pred cccccceecCCCHHHHHHHHHcC
Q 041518 332 EHPVTEMIVDQDLVEWQIRVANG 354 (765)
Q Consensus 332 ~~~~~e~~tGvDl~~~~i~~a~G 354 (765)
+...++..+|+|+.+++++...+
T Consensus 289 ~~~~~~~~~g~~~~~~~~~~~~~ 311 (316)
T 1gsa_A 289 CIREIEAEFPVSITGMLMDAIEA 311 (316)
T ss_dssp CHHHHHHHSSCCHHHHHHHHHHH
T ss_pred chHHHHHhhCcCHHHHHHHHHHH
Confidence 55556678999999999988754
No 60
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=99.84 E-value=2.1e-20 Score=201.82 Aligned_cols=238 Identities=14% Similarity=0.150 Sum_probs=165.5
Q ss_pred CEEEEEcCc-HHHHHHHHHHHHCCCeE--EEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 38 EKILIANRG-EIAYRIMRTAKRLGIRT--VAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 38 kkILI~g~G-~~a~~iiraar~~Gi~v--vav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
++|+|+... .....++++++++|+++ +.++.+.. +.. .. ..+|+|+
T Consensus 12 m~i~il~~~~~~s~~l~~al~~~G~~v~~~~~d~~~~--------------~~~-------~~----------~~~d~v~ 60 (324)
T 1z2n_X 12 VSLFIWLPESKQKTLFISTKNHTQFELNNIIFDVTLS--------------TEL-------PD----------KEPNAII 60 (324)
T ss_dssp EEEEEECCHHHHHHHBSSCCSEEEEEETTEEEEEEEE--------------SSC-------CS----------SCCSEEE
T ss_pred EEEEEEEchhhhhhhHHHHHHhcCcEEEEEEecCCCC--------------ccc-------cC----------CCceEEE
Confidence 378888753 22337788899999998 87764210 000 00 1578888
Q ss_pred eCCCcccccHHHHHHHHH-----CCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHh--C
Q 041518 115 PGYGFLSESADFAQLCGD-----NGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKI--G 187 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~-----~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~i--g 187 (765)
+.... +...+...++. .|++++ ++++++..+.||..++++++++|||+|++.... +.+++.++++.. +
T Consensus 61 ~~~~~--~~~~~~~~l~~~~~~~~g~~~~-~~~~~~~~~~dK~~~~~~l~~~gi~~P~~~~~~--~~~~~~~~~~~~~~~ 135 (324)
T 1z2n_X 61 TKRTH--PVGKMADEMRKYEKDHPKVLFL-ESSAIHDMMSSREEINALLIKNNIPIPNSFSVK--SKEEVIQLLQSKQLI 135 (324)
T ss_dssp ECCSC--SSSHHHHHHHHHHHHCTTSEEE-TCHHHHHHHTBHHHHHHHHHHTTCCCSCEEEES--SHHHHHHHHHTTCSC
T ss_pred Eeccc--hHHHHHHHHHHHHHhCCCCeEe-CCHHHHHHHhCHHHHHHHHHHCCCCCCCEEEeC--CHHHHHHHHHHcCCC
Confidence 76432 22223333333 788865 899999999999999999999999999987655 888888888775 4
Q ss_pred CcEEEeecCCCCC---ccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCC-CeeEEEEEEEeccccEEEEEeee
Q 041518 188 YPILIKPTHGGGG---KGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQ-PRHIEVQIFGDKYGKVLHLYERD 263 (765)
Q Consensus 188 ~PvVVKP~~g~Gg---~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~g-grei~v~v~~d~~g~vv~l~~r~ 263 (765)
||+|+||..|.|| +|+.++++.+++.. + +.++++|+||++ ++++++.+++ |.++....+.
T Consensus 136 ~P~vvKP~~g~g~~~s~gv~~v~~~~~l~~------------~-~~~~lvqe~i~~~g~~~~v~v~g---~~~~~~~~~~ 199 (324)
T 1z2n_X 136 LPFIVKPENAQGTFNAHQMKIVLEQEGIDD------------I-HFPCLCQHYINHNNKIVKVFCIG---NTLKWQTRTS 199 (324)
T ss_dssp SSEEEEESBCSSSSGGGEEEEECSGGGGTT------------C-CSSEEEEECCCCTTCEEEEEEET---TEEEEEEECC
T ss_pred CCEEEeeCCCCCCccceeeEEEeCHHHHhh------------c-CCCEEEEEccCCCCcEEEEEEEC---CEEEEEEecC
Confidence 9999999999999 99999999988652 1 478999999985 5778877663 2444432221
Q ss_pred cc-ccc-----------------------------------cceeeeeecCCCCCCHHHH-HHHHHHHHHHHHHcCCCce
Q 041518 264 CS-VQR-----------------------------------RHQKIIEEAPAPNVTHDFR-ALLGQAAVSAAKAVSYHNA 306 (765)
Q Consensus 264 ~s-~~~-----------------------------------~~~k~~e~~Pa~~l~~~~~-~~l~~~a~~i~~alg~~G~ 306 (765)
.. +.. .+.......+. .+.... +++.+.+.++++++|+. .
T Consensus 200 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~a~~~~~~lg~~-~ 276 (324)
T 1z2n_X 200 LPNVHRCGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILEDPI--LLNLTSEAEMRDLAYKVRCALGVQ-L 276 (324)
T ss_dssp CCCCCCSSCCEEEEETTBGGGGGGSCTTSSCHHHHHHHHTTTTCCCBCSCTT--TTTSCCHHHHHHHHHHHHHHHTCS-E
T ss_pred cccccCCCccceeeccccchhhhccccccccccccccccccchhhccccCCc--cccCCCHHHHHHHHHHHHHHhCCc-E
Confidence 10 000 00000000111 122222 68999999999999996 8
Q ss_pred eEEEEEEECCCCcEEEEEecccCC
Q 041518 307 GTVEFIVDTVSDQFYFMEMNTRLQ 330 (765)
Q Consensus 307 ~~vEf~~~~~~g~~~~iEiN~R~~ 330 (765)
++|||++++++|++||||||+|++
T Consensus 277 ~~vD~~~~~~~g~~~vlEvN~~Pg 300 (324)
T 1z2n_X 277 CGIDFIKENEQGNPLVVDVNVFPS 300 (324)
T ss_dssp EEEEEECGGGCSSCEEEEEEESCC
T ss_pred EeeEEEEEcCCCCEEEEEEcCCCC
Confidence 899999984368899999999997
No 61
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.84 E-value=3.7e-21 Score=227.50 Aligned_cols=241 Identities=17% Similarity=0.178 Sum_probs=180.6
Q ss_pred CCHHHHHHHHHHhCCCEEEeCCCcccccHHHHHHHHHCCCc-------EECCcHHHHHHhcCHHHHHHHHHHCCCCCCCc
Q 041518 96 LNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLT-------FIGPPVSAIRDMGDKSASKRIMGAAGVPLVPG 168 (765)
Q Consensus 96 ld~~~Il~~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~-------~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~ 168 (765)
.+.+.|+++|++.++|+++.+. +..|..++...++. ..|++..++.+++||..+|++|+++|||+|++
T Consensus 433 ~st~~Iv~~A~~~gid~~vlg~-----e~~l~~lg~~~~~~~ig~~~~t~~~s~~aa~~~~DK~~tk~lL~~~GIPvP~~ 507 (757)
T 3ln7_A 433 LSTQALLFDVIQKGIHTEILDE-----NDQFLCLKYGDHIEYVKNGNMTSHDSYISPLIMENKVVTKKVLQKAGFNVPQS 507 (757)
T ss_dssp HHHHHHHHHHHHHTCEEEEEET-----TTTEEEEEETTEEEEEETTTBCSSSBSHHHHHHHHSHHHHHHHHHHTCCCCCE
T ss_pred CCHHHHHHHHHHhCCCEEEECC-----CHHHHHhcccccceeeccCccCCCCHHHHHHHhcCHHHHHHHHHHCCcCCCCE
Confidence 5678999999999999998663 33333333333333 34567799999999999999999999999999
Q ss_pred cccCCCCHHHHHHHH-HHhCCcEEEeecCCCCCccEEEE----CChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCee
Q 041518 169 YHGNEQDIDLMKSEA-AKIGYPILIKPTHGGGGKGMRIV----QSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRH 243 (765)
Q Consensus 169 ~~~~~~s~~e~~~~~-~~ig~PvVVKP~~g~Gg~Gv~~v----~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggre 243 (765)
.... +.+++.+++ +.+|||+||||..|++|+||+++ ++.+++.++++.+... +..++||+||+ |+|
T Consensus 508 ~~~~--~~~ea~~~~~~~~g~PvVVKP~~g~~G~GV~iv~~~v~~~eel~~al~~a~~~------~~~vlVEefI~-G~E 578 (757)
T 3ln7_A 508 VEFT--SLEKAVASYALFENRAVVIKPKSTNYGLGITIFQQGVQNREDFAKALEIAFRE------DKEVMVEDYLV-GTE 578 (757)
T ss_dssp EEES--CHHHHHHGGGGSSSSCEEEEESSCSTTTTCEECSSCCCCHHHHHHHHHHHHHH------CSSEEEEECCC-SEE
T ss_pred EEEC--CHHHHHHHHHHhcCCCEEEEeCCCCCCCCeEEecCCCCCHHHHHHHHHHHHhc------CCcEEEEEcCC-CcE
Confidence 8655 888887766 77999999999999999999999 8999999999877643 57899999999 599
Q ss_pred EEEEEEEeccccEEEEEeeeccc-------------------ccc---cee-----------------------------
Q 041518 244 IEVQIFGDKYGKVLHLYERDCSV-------------------QRR---HQK----------------------------- 272 (765)
Q Consensus 244 i~v~v~~d~~g~vv~l~~r~~s~-------------------~~~---~~k----------------------------- 272 (765)
++|.+++ |+++....|.-.. .++ |..
T Consensus 579 i~v~Vlg---gkvvaai~R~p~~VvGDG~~ti~eLi~~~n~~p~rg~~~~~~l~~I~ld~~~~~~L~~~g~~~d~Vp~~G 655 (757)
T 3ln7_A 579 YRFFVLG---DETLAVLLRVPANVVGDSVHSVAELVAMKNDHPLRGDGSRTPLKKIALGEIEQLQLKEQGLTIDSIPAKD 655 (757)
T ss_dssp EEEEEET---TEEEEEEEECCSEEEGGGCCCHHHHHHHHHTSTTEECSSSSSEECCCCCHHHHHHHHHHTCCSSSCCCSS
T ss_pred EEEEEEC---CEEEEEEEEecccccCCCcccHHHHHHhhcccccccccccCccccccccHHHHHHHHHcCCCccccCCCC
Confidence 9999984 4677766653210 000 000
Q ss_pred ----------eeeecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEC-------CCCcEEEEEecccCCc-ccc
Q 041518 273 ----------IIEEAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDT-------VSDQFYFMEMNTRLQV-EHP 334 (765)
Q Consensus 273 ----------~~e~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~-------~~g~~~~iEiN~R~~~-~~~ 334 (765)
.-.++.+...++.+.+++.+.|.++++++|+ .++.||++.+. ..+++.+||+|++++. .|-
T Consensus 656 e~v~L~~~~Nls~GG~~~dvtd~i~p~~~~~a~~aa~~lGl-~~~GvDli~~di~~p~~~~~~~~~iiEvN~~P~~~~h~ 734 (757)
T 3ln7_A 656 QLVQLRANSNISTGGDSIDMTDEMHESYKQLAVGITKAMGA-AVCGVDLIIPDLKQPATPNLTSWGVIEANFNPMMMMHI 734 (757)
T ss_dssp CEEECCSSCCGGGTCCEEECTTTSCHHHHHHHHHHHHHHTC-SEEEEEEEESCSSSCCCSSTTTCEEEEEESSCCHHHHH
T ss_pred CEEEeecccccccCccceeccccCCHHHHHHHHHHHHHhCC-CEEEEEEEecCccccccccCCCeEEEEEcCCcchhhhh
Confidence 0000111134456678899999999999999 58899999872 1357899999999983 332
Q ss_pred ccceecCCCHHHHHHHHHcC
Q 041518 335 VTEMIVDQDLVEWQIRVANG 354 (765)
Q Consensus 335 ~~e~~tGvDl~~~~i~~a~G 354 (765)
..-..+|.|+...+++....
T Consensus 735 ~p~~g~~~~v~~~ii~~lfp 754 (757)
T 3ln7_A 735 FPYAGKSRRLTQNVIKMLFP 754 (757)
T ss_dssp SCSSSCCCCCHHHHHHHHCT
T ss_pred ccccCCCCchHHHHHHHhcC
Confidence 22346799999999988753
No 62
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii}
Probab=99.77 E-value=8.7e-19 Score=181.28 Aligned_cols=177 Identities=15% Similarity=0.197 Sum_probs=137.5
Q ss_pred hcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecCC-----CCCccEEE-ECChhHHHHHHHHHHH
Q 041518 148 MGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTHG-----GGGKGMRI-VQSPNDFVDSFLGAQR 221 (765)
Q Consensus 148 ~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~g-----~Gg~Gv~~-v~s~~el~~a~~~~~~ 221 (765)
..||..+|++|+++|||+|++.... +.+++.++++++|||+|+||..+ ++|.|+.+ ++|.+|+.++++.+..
T Consensus 19 ~l~k~~~k~ll~~~GIp~p~~~~~~--~~~ea~~~a~~lg~PvvvKp~~~~~~~r~~~gGv~~~v~~~~el~~a~~~~~~ 96 (238)
T 1wr2_A 19 AMVEYEAKQVLKAYGLPVPEEKLAK--TLDEALEYAKEIGYPVVLKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHE 96 (238)
T ss_dssp EECHHHHHHHHHTTTCCCCCCEEES--SHHHHHHHHHHHCSSEEEEEECTTCCCHHHHTCEEEEECSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCcCCCCeEEeC--CHHHHHHHHHHhCCCEEEEEccCCCCcCCccCCEEEeCCCHHHHHHHHHHHHH
Confidence 3599999999999999999998655 88999999999999999999999 77889998 7999999999999887
Q ss_pred HHHhcCC---CCcEEEecccCCCeeEEEEEEEec-cccEEEEEeeeccccccceeeeeecCCCCCCHHHHHHHHHHHHHH
Q 041518 222 EAAASFG---INTILLEKYITQPRHIEVQIFGDK-YGKVLHLYERDCSVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSA 297 (765)
Q Consensus 222 ea~~~fg---~~~vlVEeyI~ggrei~v~v~~d~-~g~vv~l~~r~~s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i 297 (765)
.....++ ...++||+||++++|+++.++.|. .|.++.++.-...+...........| ++++..++|.+.++++
T Consensus 97 ~~~~~~~~~~~~~vlVEe~i~~g~E~~v~v~~d~~~g~v~~~~~Gg~~iE~~~d~~~~~~P---l~~~~~~~~~~~~~~~ 173 (238)
T 1wr2_A 97 NAKKYRPDAEILGVLVAPMLKPGREVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVP---ITEKDARKMIQEIKAY 173 (238)
T ss_dssp HHHHHCTTCCCCEEEEEECCCCCEEEEEEEEEETTTEEEEEEEECSTTHHHHCCCEEEESS---CCHHHHHHHHHTSTTH
T ss_pred hhhhhCCCCccceEEEEECCCCCeEEEEEEEeCCCCCcEEEEecCCceeeeecceeeecCC---CCHHHHHHHHHHHHHH
Confidence 6554443 368999999998899999999997 67777665311111111111222233 8999999999999999
Q ss_pred HHHcCCCceeEEEE------------EEECCCCc-EEEEEecccCC
Q 041518 298 AKAVSYHNAGTVEF------------IVDTVSDQ-FYFMEMNTRLQ 330 (765)
Q Consensus 298 ~~alg~~G~~~vEf------------~~~~~~g~-~~~iEiN~R~~ 330 (765)
...+||+|...+++ ++.+ .++ +++|||||++-
T Consensus 174 ~~~~g~~G~~~~d~~~l~~~l~~l~~~~~~-~~~~~~~lEINPl~~ 218 (238)
T 1wr2_A 174 PILAGARGEEPADIDAIVDMLLKVSKLVDD-LKDYIKEMDLNPVFV 218 (238)
T ss_dssp HHHHCC--CCCBCHHHHHHHHHHHHHHHHH-TTTTEEEEEEEEEEE
T ss_pred HHhcCCCCCChhhHHHHHHHHHHHHHHHHc-CCCCeEEEeccCeEE
Confidence 99999999766553 1222 344 99999999984
No 63
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.77 E-value=3.8e-19 Score=210.92 Aligned_cols=244 Identities=18% Similarity=0.162 Sum_probs=173.3
Q ss_pred CCHHHHHHHHHHhCCCEEEeCC--CcccccHHHHHHHHHCCCcEECCc-HHHHHHhcCHHHHHHHHHHCCCCCCCccccC
Q 041518 96 LNGSSIVDAAIRTGAQAIHPGY--GFLSESADFAQLCGDNGLTFIGPP-VSAIRDMGDKSASKRIMGAAGVPLVPGYHGN 172 (765)
Q Consensus 96 ld~~~Il~~a~~~~~DaV~pg~--g~lsE~~~~a~~~~~~Gl~~~Gp~-~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~ 172 (765)
.+.+.|+++|++.++++++.+. .++.........+...|. ..|++ ..++..++||..+|++|+++|||+|++....
T Consensus 428 ~S~~~l~~aA~~~Gi~v~vidp~~~l~~l~~~~~~~~~~~g~-itg~~~~~a~~~~~DK~~tk~lL~~~GIPvP~~~~~~ 506 (750)
T 3ln6_A 428 LSTQLLLFDVIQKGVNFEVLDEQDQFLKLWHNSHIEYVKNGN-MTSKDNYIVPLAMANKVVTKKILDEKHFPTPFGDEFT 506 (750)
T ss_dssp HHHHHHHHHHHHHTCEEEESCSSSCEEEEEETTEEEEEETTT-BCTTSCTHHHHHTTTSHHHHHHHHHTTCCCCCCCCEE
T ss_pred ccHHHHHHHHHhCCCCEEEECCCchHhhhccCCCcEEEecCC-eeCCCHHHHHHHHhCHHHHHHHHHHCCcCCCCEEEEC
Confidence 4668999999999999977654 333221110000000121 13444 4567777899999999999999999998665
Q ss_pred CCCHHHHHHHH-HHhCCcEEEeecCCCCCccEEEEC---ChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEE
Q 041518 173 EQDIDLMKSEA-AKIGYPILIKPTHGGGGKGMRIVQ---SPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQI 248 (765)
Q Consensus 173 ~~s~~e~~~~~-~~ig~PvVVKP~~g~Gg~Gv~~v~---s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v 248 (765)
+.+++.+++ +.+|||+||||..|++|+||.+++ +.+++.++++.+... +..+|||+||+ |+|+++.+
T Consensus 507 --~~~ea~~~~~~~~g~PvVVKP~~G~~G~GV~iv~~~~s~eel~~a~~~~~~~------~~~vlVEefI~-G~E~~v~V 577 (750)
T 3ln6_A 507 --DRKEALNYFSQIQDKPIVVKPKSTNFGLGISIFKTSANLASYEKAIDIAFTE------DSAILVEEYIE-GTEYRFFV 577 (750)
T ss_dssp --TTTTHHHHHHHSSSSCEEEEETTCCSSSSCEEESSCCCHHHHHHHHHHHHHH------CSEEEEEECCC-SEEEEEEE
T ss_pred --CHHHHHHHHHHhcCCcEEEEeCCCCCCCCEEEEeCCCCHHHHHHHHHHHHhh------CCcEEEEeccC-CCEEEEEE
Confidence 777777777 678999999999999999999998 899999999887643 57999999999 59999999
Q ss_pred EEeccccEEEEEeeeccc------------------c--c--cceeeee-------------------------------
Q 041518 249 FGDKYGKVLHLYERDCSV------------------Q--R--RHQKIIE------------------------------- 275 (765)
Q Consensus 249 ~~d~~g~vv~l~~r~~s~------------------~--~--~~~k~~e------------------------------- 275 (765)
++ |+++....|.-.. . + .|.+..+
T Consensus 578 vg---g~vvaa~~r~p~~v~GdG~~tI~eLI~~~n~dp~rg~~~~~~l~~i~~d~~~~~~l~~~g~~~~~V~~~Ge~v~L 654 (750)
T 3ln6_A 578 LE---GDCIAVLLRVAANVVGDGIHTISQLVKLKNQNPLRGYDHRSPLEVIELGEVEQLMLEQQGYTVNSIPPEGTKIEL 654 (750)
T ss_dssp ET---TEEEEEEEEECCEEECCTTCCHHHHHHHHTTCTTEESSSCCSEECCCCCHHHHHHHHHTTCCSSCCCCTTCEEES
T ss_pred EC---CEEEEEEEEecceEecCCccCHHHHHHhhccCccccccccCccccccccHHHHHHHHHcCCCccccCCCCCEEEE
Confidence 84 3566665543211 0 0 0100000
Q ss_pred --------ecCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEC-------CCCcEEEEEecccCCc-ccccccee
Q 041518 276 --------EAPAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDT-------VSDQFYFMEMNTRLQV-EHPVTEMI 339 (765)
Q Consensus 276 --------~~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~-------~~g~~~~iEiN~R~~~-~~~~~e~~ 339 (765)
++.+...++.+.+++.+.|.++++++|+. ++.||++.+. +.+++++||+|++++. .|-.-...
T Consensus 655 ~~~~Nls~Gg~~~d~td~i~p~~~~~a~~aa~~igl~-~~GvDli~~di~~~~~~~~~~~~iiEvN~~pg~~~h~~p~~g 733 (750)
T 3ln6_A 655 RRNSNISTGGDSIDVTNTMDPTYKQLAAEMAEAMGAW-VCGVDLIIPNATQAYSKDKKNATCIELNFNPLMYMHTYCQEG 733 (750)
T ss_dssp CSSCCTTTTCEEEECTTTSCHHHHHHHHHHHHHHTCS-SCEEEEEESCSSSCCCTTTTCCEEEEEESSCCCHHHHSCSBS
T ss_pred eecccccCCCceeeccccCCHHHHHHHHHHHHHhCCC-eEEEEEEecCccccccccCCCeEEEEEcCCcchhhhcCcccC
Confidence 00011234556688999999999999995 8899999973 2356899999999983 33333456
Q ss_pred cCCCHHHHHHHHHc
Q 041518 340 VDQDLVEWQIRVAN 353 (765)
Q Consensus 340 tGvDl~~~~i~~a~ 353 (765)
+|.|+.+.+++...
T Consensus 734 ~~~~v~~~ii~~lf 747 (750)
T 3ln6_A 734 PGQSITPRILAKLF 747 (750)
T ss_dssp CCCCCHHHHHHHHC
T ss_pred CCCcHHHHHHHHhC
Confidence 79999999888753
No 64
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A*
Probab=99.73 E-value=1.5e-16 Score=169.54 Aligned_cols=219 Identities=14% Similarity=0.096 Sum_probs=157.1
Q ss_pred CCCEEEeCCCccc--cc---HHHHHHHHHCCCcEECCcHHHHHHhcCH----HHHHHHHHHCCC---CCCCccccCCCCH
Q 041518 109 GAQAIHPGYGFLS--ES---ADFAQLCGDNGLTFIGPPVSAIRDMGDK----SASKRIMGAAGV---PLVPGYHGNEQDI 176 (765)
Q Consensus 109 ~~DaV~pg~g~ls--E~---~~~a~~~~~~Gl~~~Gp~~eai~~~~DK----~~~r~~l~~~Gv---pvp~~~~~~~~s~ 176 (765)
.+|++++..+... ++ ..+...++..|++++ ++++++..++|| ..+-+++.++|+ |.+|..... +.
T Consensus 68 ~~D~vi~R~~~~~~~~~~~~r~vl~~le~~Gvpvi-N~~~sI~~~~DK~~~~~~~~~~l~~~gi~~~P~~~~~~~~--~~ 144 (309)
T 1i7n_A 68 RPDFVLIRQHAFGMAENEDFRHLVIGMQYAGLPSI-NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYP--NH 144 (309)
T ss_dssp CCSEEEECSCCCCSSTTCCCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEES--SG
T ss_pred cCCEEEEecccccccccchHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCCEEeeC--Ch
Confidence 5799998754332 22 445667899999998 899999999999 667788889998 865644333 43
Q ss_pred HHHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccE
Q 041518 177 DLMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKV 256 (765)
Q Consensus 177 ~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~v 256 (765)
.+ ..+..|||+|+||..|+.|+||.++++.+++++.++..... ...+++||||+.++++.+.++++ ++
T Consensus 145 ~~---~~~~~g~PvVvK~~~Gs~G~GV~lv~~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VvGg---~v 212 (309)
T 1i7n_A 145 RE---MLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALT------QTYATAEPFIDAKYDIRVQKIGN---NY 212 (309)
T ss_dssp GG---GSSCCCSSEEEEESSCSTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeecCCCceEEEEEECC---EE
Confidence 33 34568999999999999999999999999999888755432 36788999999878888888853 45
Q ss_pred EEEEeee--ccccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHc-CCCceeEEEEEEECCCCcEEEEEecc--cCCc
Q 041518 257 LHLYERD--CSVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAV-SYHNAGTVEFIVDTVSDQFYFMEMNT--RLQV 331 (765)
Q Consensus 257 v~l~~r~--~s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~al-g~~G~~~vEf~~~~~~g~~~~iEiN~--R~~~ 331 (765)
+....+. -.+..+. ......+. .++ +++.+.|.++++++ |+ +++.||++.+. +|.+|++|+|. -++.
T Consensus 213 ~a~~Rr~~~g~wrtN~-~~~~~e~~-~l~----~e~~~la~~A~~a~gGl-di~GVDll~~~-~g~~~V~EVN~~~~P~~ 284 (309)
T 1i7n_A 213 KAYMRTSISGNWKTNT-GSAMLEQI-AMS----DRYKLWVDACSEMFGGL-DICAVKAVHGK-DGKDYIFEVMDCSMPLI 284 (309)
T ss_dssp EEEEEESSCTTTSCSC-CCSSEEEE-CCC----HHHHHHHHHHTTGGGCC-SEEEEEEEEET-TSCEEEEEEECTTCCCC
T ss_pred EEEEEEcCCCCCeecC-Ccceeeec-CCC----HHHHHHHHHHHHHhCCC-CEEEEEEEEcC-CCCEEEEEECCCCCCCc
Confidence 5443331 1111111 00100122 234 45778899999999 67 89999999997 78899999999 7753
Q ss_pred cccccceecCCCHHHHHHHHH
Q 041518 332 EHPVTEMIVDQDLVEWQIRVA 352 (765)
Q Consensus 332 ~~~~~e~~tGvDl~~~~i~~a 352 (765)
+ -++..++.++.+.+++..
T Consensus 285 ~--~~~~~~~~~ia~~ii~~~ 303 (309)
T 1i7n_A 285 G--EHQVEDRQLITDLVISKM 303 (309)
T ss_dssp S--SCHHHHHHHHHHHHHHHH
T ss_pred c--chhhhhHHHHHHHHHHHH
Confidence 2 344456778887777643
No 65
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens}
Probab=99.71 E-value=2.4e-16 Score=170.01 Aligned_cols=221 Identities=14% Similarity=0.070 Sum_probs=160.3
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHCCCcEECCcHHHHHHhcCH----HHHHHHHHHCCC---CCCCccccCCCCH
Q 041518 109 GAQAIHPGYGFLS--E---SADFAQLCGDNGLTFIGPPVSAIRDMGDK----SASKRIMGAAGV---PLVPGYHGNEQDI 176 (765)
Q Consensus 109 ~~DaV~pg~g~ls--E---~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK----~~~r~~l~~~Gv---pvp~~~~~~~~s~ 176 (765)
..|++++..+... + ...+...++..|++++ ++++++..++|| ..+.+++.++|+ |.+|..... +.
T Consensus 85 ~~D~vi~R~~~~~~~~~~~yr~vl~~le~~Gvpvi-N~~~sI~~~~DK~~v~~~~l~~l~~~gi~~~P~~~~t~~~--~~ 161 (344)
T 2p0a_A 85 KPDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAV-NSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFP--NH 161 (344)
T ss_dssp CCSEEEECSCSEEGGGTEECHHHHHHHHHTTCCEE-SCHHHHHHTTCHHHHHHHHHHHHHHHCTTTSCBCCCEEES--SS
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCceec-CCHHHHHhhCCchHHHHHHHHHHHHCCCCCCCCCCEEecC--ch
Confidence 6899998865422 2 1345667899999998 999999999999 677788899998 865543332 33
Q ss_pred HHHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccE
Q 041518 177 DLMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKV 256 (765)
Q Consensus 177 ~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~v 256 (765)
.+ ..+.+|||+|+||..|+.|+||.+++|.++++..++..... ...+++||||+.++++.+.++++ ++
T Consensus 162 ~~---~~~~~g~PvVvK~~~Gs~G~GV~lve~~~~~~~~~~~~~~~------~~~~~vQefI~~g~DiRv~VVGg---~v 229 (344)
T 2p0a_A 162 KP---MVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMA------KTYATTEAFIDSKYDIRIQKIGS---NY 229 (344)
T ss_dssp TT---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TCCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEECCHHHHHHHHHHHhcc------CCeEEEEeccCCCccEEEEEECC---EE
Confidence 22 34468999999999999999999999999999887654422 36788999999778888888853 45
Q ss_pred EEEEeee--ccccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHc-CCCceeEEEEEEECCCCcEEEEEecc--cCCc
Q 041518 257 LHLYERD--CSVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAV-SYHNAGTVEFIVDTVSDQFYFMEMNT--RLQV 331 (765)
Q Consensus 257 v~l~~r~--~s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~al-g~~G~~~vEf~~~~~~g~~~~iEiN~--R~~~ 331 (765)
+....+. -.+..+.. .....+. .++ +++.+.+.++++++ |+ +++.||++.+. +|.+|++|+|. .++
T Consensus 230 va~~R~~~~g~wrtN~~-~~~~e~~-~l~----~e~~~la~~Aa~a~gGl-di~GVDll~~~-~G~~~VlEVN~~~~P~- 300 (344)
T 2p0a_A 230 KAYMRTSISGNWKANTG-SAMLEQV-AMT----ERYRLWVDSCSEMFGGL-DICAVKAVHSK-DGRDYIIEVMDSSMPL- 300 (344)
T ss_dssp EEEEEEESSSCSSTTSS-SEEEEEE-CCC----HHHHHHHHHHTTGGGCC-SEEEEEEEEET-TSCEEEEEEECTTCCC-
T ss_pred EEEEEecCCCCCeecCC-ceEEEee-CCC----HHHHHHHHHHHHHhCCC-CEEEEEEEEcC-CCCEEEEEEcCCCCCc-
Confidence 5543321 11111111 1111122 234 45788899999999 67 89999999997 78899999999 664
Q ss_pred cccccceecCCCHHHHHHHHHcC
Q 041518 332 EHPVTEMIVDQDLVEWQIRVANG 354 (765)
Q Consensus 332 ~~~~~e~~tGvDl~~~~i~~a~G 354 (765)
..-++..++.|+.+.+++...-
T Consensus 301 -~~~~~~~~~~~Ia~~ii~~i~~ 322 (344)
T 2p0a_A 301 -IGEHVEEDRQLMADLVVSKMSQ 322 (344)
T ss_dssp -CGGGHHHHHHHHHHHHHHHHHT
T ss_pred -ccchhhhHHHHHHHHHHHHHHH
Confidence 3345566789999999987744
No 66
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A*
Probab=99.71 E-value=3.8e-16 Score=171.22 Aligned_cols=219 Identities=13% Similarity=0.090 Sum_probs=158.2
Q ss_pred CCCEEEeCCCccc--c---cHHHHHHHHHCCCcEECCcHHHHHHhcCH----HHHHHHHHHCCC---CCCCccccCCCCH
Q 041518 109 GAQAIHPGYGFLS--E---SADFAQLCGDNGLTFIGPPVSAIRDMGDK----SASKRIMGAAGV---PLVPGYHGNEQDI 176 (765)
Q Consensus 109 ~~DaV~pg~g~ls--E---~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK----~~~r~~l~~~Gv---pvp~~~~~~~~s~ 176 (765)
..|+|++..+... + ...+...++..|++++ ++++++..|+|| ..+-+++.++|+ |.++..... +.
T Consensus 180 ~~DaviiR~~~~~~~~~~~yr~vlr~lE~~Gvpvi-Ns~~sI~~~~DK~~vf~~~l~ll~~~gi~~iP~t~~t~~~--~~ 256 (422)
T 1pk8_A 180 KPDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSV-NSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTFYP--NH 256 (422)
T ss_dssp CCSEEEECSCSBCSSTTCBCHHHHHHHHHTTCCEE-SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEES--SG
T ss_pred CCCEEEEeccccccccchhHHHHHHHHHHCCcccc-CCHHHHHHhCCccHHHHHHHHHHHhCCCCCCCCCceEecC--ch
Confidence 5799998754322 2 1345677899999998 899999999999 567778889998 755544332 33
Q ss_pred HHHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCCeeEEEEEEEeccccE
Q 041518 177 DLMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQPRHIEVQIFGDKYGKV 256 (765)
Q Consensus 177 ~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ggrei~v~v~~d~~g~v 256 (765)
.+ .++..|||+|+||..|+.|+||.++++.++++..++..... ...+++||||+.++++.+.++++ ++
T Consensus 257 ~~---~i~~~g~PvVvKp~~GS~G~GV~lve~~~~l~~ii~~~~~~------~~~~~vQEfI~~g~DIRv~VVGg---~v 324 (422)
T 1pk8_A 257 KE---MLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALT------KTYATAEPFIDAKYDVRVQKIGQ---NY 324 (422)
T ss_dssp GG---CCCCSSSSEEEEESSCCTTTTEEEECSHHHHHHHHHHHHHH------TSCEEEEECCCEEEEEEEEEETT---EE
T ss_pred hh---hhhccCCCEEEEeCCCCceeCeEEeCCHHHHHHHHHHHhcc------CceEEEEeecCCCceEEEEEECC---EE
Confidence 33 33468999999999999999999999999999888765432 36789999999878888888853 45
Q ss_pred EEEEeee--ccccccceeeeeecCCCCCCHHHHHHHHHHHHHHHHHc-CCCceeEEEEEEECCCCcEEEEEecc--cCCc
Q 041518 257 LHLYERD--CSVQRRHQKIIEEAPAPNVTHDFRALLGQAAVSAAKAV-SYHNAGTVEFIVDTVSDQFYFMEMNT--RLQV 331 (765)
Q Consensus 257 v~l~~r~--~s~~~~~~k~~e~~Pa~~l~~~~~~~l~~~a~~i~~al-g~~G~~~vEf~~~~~~g~~~~iEiN~--R~~~ 331 (765)
+....+- -.+..+.. .....+. .++ +++.+.+.++++++ |+ +++.||++.+. +|++|++|+|. .++.
T Consensus 325 va~~Rr~~~g~WrtNvg-~g~~e~i-~lt----~e~~elA~kAaka~gGl-diaGVDlL~s~-dG~~~VlEVN~s~~P~~ 396 (422)
T 1pk8_A 325 KAYMRTSVSGNWKTNTG-SAMLEQI-AMS----DRYKLWVDTCSEIFGGL-DICAVEALHGK-DGRDHIIEVVGSSMPLI 396 (422)
T ss_dssp EEEEEEESSSCSSTTSS-CEEEEEE-CCC----HHHHHHHHHHTTGGGCC-SEEEEEEEEET-TSCEEEEEEECTTCCCC
T ss_pred EEEEEEcCCCCceeccC-ceeeeee-CCC----HHHHHHHHHHHHHhCCC-CEEEEEEEEcC-CCCEEEEEECCCCCCCc
Confidence 5443321 11111111 1111122 234 45788899999999 67 89999999997 78899999999 7642
Q ss_pred cccccceecCCCHHHHHHHHH
Q 041518 332 EHPVTEMIVDQDLVEWQIRVA 352 (765)
Q Consensus 332 ~~~~~e~~tGvDl~~~~i~~a 352 (765)
.-++..++.|+.+.+++..
T Consensus 397 --~g~~~~~~~~IA~~ii~~i 415 (422)
T 1pk8_A 397 --GDHQDEDKQLIVELVVNKM 415 (422)
T ss_dssp --TTCHHHHHHHHHHHHHHHH
T ss_pred --cchhhhHHHHHHHHHHHHH
Confidence 2445567888888888765
No 67
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X
Probab=99.68 E-value=1.2e-15 Score=166.14 Aligned_cols=231 Identities=12% Similarity=0.100 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCCCc-ccc---
Q 041518 47 EIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYGF-LSE--- 122 (765)
Q Consensus 47 ~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~g~-lsE--- 122 (765)
.+..++++++++.|++++.++.+... .. ....|+|++..+. ..|
T Consensus 33 ~~~~~l~~al~~~G~~~~~iD~~~~~-----------------------~~---------~~~~Dvvi~~l~~~~~ea~~ 80 (346)
T 2q7d_A 33 LNFQAFAELCRKRGMEVVQLNLSRPI-----------------------EE---------QGPLDVIIHKLTDVILEADQ 80 (346)
T ss_dssp HTHHHHHHHHHTTTCEEEECCTTSCS-----------------------GG---------GCCCSEEEECCHHHHHHHHT
T ss_pred hhHHHHHHHHHhCCcEEEEcccccch-----------------------hh---------cCCCCEEEeCCccccccccc
Confidence 34678999999999998776532100 00 0356788877422 111
Q ss_pred -----cHHHH---HHHH-HCCCcEECCcHHHHHHhcCHHHHHHHHHHC-------CCCCCCccccCCCCHHHHHHHHH--
Q 041518 123 -----SADFA---QLCG-DNGLTFIGPPVSAIRDMGDKSASKRIMGAA-------GVPLVPGYHGNEQDIDLMKSEAA-- 184 (765)
Q Consensus 123 -----~~~~a---~~~~-~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~-------Gvpvp~~~~~~~~s~~e~~~~~~-- 184 (765)
..... +... ..|++++ +++.++..+.||..|.+++.++ |||+|++......+.+++.+..+
T Consensus 81 ~d~~~~~~~~~l~~~~~~~~gv~vi-np~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t~~~~~~~~~~~~~~~~~~ 159 (346)
T 2q7d_A 81 NDSQSLELVHRFQEYIDAHPETIVL-DPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPFMELTSLCGDDTMRLLEKN 159 (346)
T ss_dssp TCHHHHHHHHHHHHHHHHCTTSEEE-SCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCEEEECSCCCTTHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHHCCCeEEc-CCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCCEEEEeCCCHHHHHHHHHhc
Confidence 11121 2221 3478777 8999999999999999999997 99999988765222344544443
Q ss_pred HhCCcEEEeecCCCC--CccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccC-CCeeEEEEEEEeccccEEEEEe
Q 041518 185 KIGYPILIKPTHGGG--GKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYIT-QPRHIEVQIFGDKYGKVLHLYE 261 (765)
Q Consensus 185 ~ig~PvVVKP~~g~G--g~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~-ggrei~v~v~~d~~g~vv~l~~ 261 (765)
.+|||+|+||..|.| |.||.++.+.++|... +.+++|||||+ +++++.|-++++ .++....
T Consensus 160 ~lg~P~VvKP~~g~Gs~s~~v~~v~~~~~l~~~-------------~~~~lvQefI~~~G~dirv~VvG~---~v~~~~r 223 (346)
T 2q7d_A 160 GLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAI-------------QPPCVVQNFINHNAVLYKVFVVGE---SYTVVQR 223 (346)
T ss_dssp TCCSSEEEECSBCSSTTCCEEEEECSGGGTTC---------------CCEEEEECCCCTTEEEEEEEETT---EEEEEEE
T ss_pred CCCCCEEEEecCCCcceeeeeEEecCHHHHHhc-------------CCCEEEEEeeCCCCeEEEEEEECC---EEEEEEE
Confidence 578999999997643 6799999999988752 36899999998 468888888743 4444322
Q ss_pred eecc---cc---c----cc-eee---e---eecC-------CCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCC
Q 041518 262 RDCS---VQ---R----RH-QKI---I---EEAP-------APNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDTVS 317 (765)
Q Consensus 262 r~~s---~~---~----~~-~k~---~---e~~P-------a~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~~~ 317 (765)
+..+ .. . .. .++ . ...| + .+++ .+++.++|.++.++||++.+ .||++++..+
T Consensus 224 ~sl~~~~~~~~~~~~~~f~s~~~~~~g~~~~~~~~~~~~~~~-~~~~--~~el~~lA~~a~~alGl~~~-gvDii~~~~~ 299 (346)
T 2q7d_A 224 PSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDKIEGVF-ERPS--DEVIRELSRALRQALGVSLF-GIDIIINNQT 299 (346)
T ss_dssp ECCCCCC----CCCCEEEEGGGTSSTTCCCGGGCCSCCCSCC-CCCC--HHHHHHHHHHHHHHHCCCEE-EEEEEECTTT
T ss_pred ecCCCcCcCccccccccccceeeccCCccccccccccccccc-cCCC--hHHHHHHHHHHHHHhCCceE-eeEEEeecCC
Confidence 2111 00 0 00 000 0 0011 2 2232 57899999999999999865 5999998535
Q ss_pred CcEEEEEecccCC
Q 041518 318 DQFYFMEMNTRLQ 330 (765)
Q Consensus 318 g~~~~iEiN~R~~ 330 (765)
|++|+||||+=++
T Consensus 300 g~~~VlEVN~~PG 312 (346)
T 2q7d_A 300 GQHAVIDINAFPG 312 (346)
T ss_dssp CCEEEEEEEESCC
T ss_pred CCEEEEEEeCCcc
Confidence 7899999999665
No 68
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=3.5e-17 Score=147.27 Aligned_cols=104 Identities=41% Similarity=0.654 Sum_probs=90.1
Q ss_pred HHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHh
Q 041518 146 RDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAA 225 (765)
Q Consensus 146 ~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~ 225 (765)
.+++||..+|++|+++|||+|+++.....+.+++.++++.+|||+|+||..|+||+|+++++|.+|+..+++.+......
T Consensus 4 ~~~~dK~~~~~~l~~~gip~p~~~~~~~~~~~~~~~~~~~~~~P~vvKp~~~~~~~gv~~v~~~~el~~~~~~~~~~~~~ 83 (108)
T 2cqy_A 4 GSSGDKIESKLLAKKAEVNTIPGFDGVVKDAEEAVRIAREIGYPVMIKASAGGGGKGMRIAWDDEETRDGFRLSSQEAAS 83 (108)
T ss_dssp CCCCCCCCSTTCCCSSCCCCCSCCCSCBSSHHHHHHHHHHHCSSEEEEETTSCCTTTCEEESSHHHHHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHhcCCCEEEEECCCCCCccEEEeCCHHHHHHHHHHHHHHHHh
Confidence 46899999999999999999998722234889999999999999999999999999999999999999999988765544
Q ss_pred cCCCCcEEEecccCCCeeEEEEEE
Q 041518 226 SFGINTILLEKYITQPRHIEVQIF 249 (765)
Q Consensus 226 ~fg~~~vlVEeyI~ggrei~v~v~ 249 (765)
.+++..+|||+||+|.+|++++++
T Consensus 84 ~~~~~~~lvee~i~g~~E~~v~v~ 107 (108)
T 2cqy_A 84 SFGDDRLLIEKFIDNPRHISGPSS 107 (108)
T ss_dssp HTSSCCEEEEECCSSSSCCCSCCC
T ss_pred hcCCCcEEEeeccCCCcEEEEEec
Confidence 555679999999998779988764
No 69
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.58 E-value=2.2e-15 Score=129.85 Aligned_cols=73 Identities=29% Similarity=0.418 Sum_probs=69.4
Q ss_pred CCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 648 PPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 648 ~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
++..|+||++|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.+++ ++|+.|..|++|+.|.+.+
T Consensus 4 ~~~~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~-~~G~~V~~G~~l~~i~~~~ 76 (84)
T 2kcc_A 4 DPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIK-RPGAVLEAGCVVARLELDD 76 (84)
T ss_dssp CTTEECCSSSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEECS-CTTCCCCTTCCCEEEECSC
T ss_pred CCceEECCCCEEEEEEECCCCCEECCCCEEEEEEecceeEEEECCCCEEEEEEc-CCCCEECCCCEEEEEeCCC
Confidence 456799999999999999999999999999999999999999999999999999 9999999999999998654
No 70
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=1.9e-14 Score=128.25 Aligned_cols=74 Identities=28% Similarity=0.396 Sum_probs=69.9
Q ss_pred CCCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 647 GPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 647 ~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
.....|.|||+|+|.+|+|++||.|++||+|++||+|||+++|+||.+|+|. +++++|+.|..|++|++|.+.+
T Consensus 15 ~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k~~~~i~Ap~~G~V~-~~v~~G~~V~~G~~l~~i~~~~ 88 (100)
T 2dn8_A 15 NDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVK-YIKRPGAVLEAGCVVARLELDD 88 (100)
T ss_dssp CCTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEEE-ECSCTTCEECSSCEEEEECCSC
T ss_pred CCCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEEecceEEEEEcCCCEEEE-EEeCCCCEECCCCEEEEEEcCC
Confidence 4456799999999999999999999999999999999999999999999999 9999999999999999998654
No 71
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.51 E-value=2.8e-14 Score=119.02 Aligned_cols=70 Identities=36% Similarity=0.554 Sum_probs=67.1
Q ss_pred cccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeC
Q 041518 651 SVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAV 720 (765)
Q Consensus 651 ~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~ 720 (765)
.|+||++|+|.+|+|++||.|++||+|+.||+|||+.+|+||.+|+|.++++++|+.|..|++|+.|.+.
T Consensus 1 ~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 70 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGDFVNEGDVLLELSNS 70 (72)
T ss_dssp CEECCSSEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTTCEECTTCEEEEEGGG
T ss_pred CEECcccEEEEEEEcCCcCEECCCCEEEEEECCccEEEEECCCCcEEEEEecCCCCEECCCCEEEEEeCC
Confidence 3789999999999999999999999999999999999999999999999999999999999999998654
No 72
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.50 E-value=3.9e-14 Score=122.88 Aligned_cols=68 Identities=19% Similarity=0.210 Sum_probs=64.8
Q ss_pred CCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCC-ccCCCCeEEEEEeCc
Q 041518 654 SPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQ-QVSDGSVLFRLQAVH 721 (765)
Q Consensus 654 ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~-~v~~g~~l~~i~~~~ 721 (765)
++.+|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+ .|..|++|++|++..
T Consensus 16 ~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~~~ 84 (87)
T 3crk_C 16 TMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKE 84 (87)
T ss_dssp TCCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCCEETTCEEEEEESSS
T ss_pred CCCcEEEEEEEcCCCCEEcCCCEEEEEECCcccceeecCcCcEEEEEEECCCCeEECCCCEEEEEEccc
Confidence 45899999999999999999999999999999999999999999999999999 899999999998754
No 73
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.50 E-value=2.2e-14 Score=122.31 Aligned_cols=69 Identities=32% Similarity=0.472 Sum_probs=66.3
Q ss_pred CcccCCCcceEEEE-------EcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEE
Q 041518 650 GSVLSPMAGLVVKV-------LANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQ 718 (765)
Q Consensus 650 ~~v~ap~~G~v~~~-------~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 718 (765)
..|+||++|+|.++ +|++||.|++||+|+.||+|||+++|+||.+|+|.++++++|+.|..|++|+.|+
T Consensus 5 ~~v~a~~~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 5 HIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp EEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred eEEEcCCCeEEEEecccCcccccCCcCEECCCCEEEEEEeccEEEEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 46999999999997 9999999999999999999999999999999999999999999999999999873
No 74
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.48 E-value=3.9e-14 Score=124.36 Aligned_cols=70 Identities=14% Similarity=0.128 Sum_probs=66.1
Q ss_pred CCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCccee
Q 041518 655 PMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVHIQL 724 (765)
Q Consensus 655 p~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~~~~ 724 (765)
..+|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|++|++.+.+.
T Consensus 16 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K~~~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~~~~~~ 85 (93)
T 1k8m_A 16 IREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIETEALKD 85 (93)
T ss_dssp SCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSSCEECTTSEEEEEECSCCTT
T ss_pred CCCEEEEEEEcCCcCEECCCCEEEEEEcCCcEEEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEecCCCcc
Confidence 4799999999999999999999999999999999999999999999999999999999999999765543
No 75
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.47 E-value=1.5e-13 Score=116.24 Aligned_cols=73 Identities=40% Similarity=0.640 Sum_probs=69.1
Q ss_pred CCCCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEE
Q 041518 646 TGPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQ 718 (765)
Q Consensus 646 ~~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 718 (765)
+.+...|+||++|+|.+|+|++||.|++||+|+.||+|||+.+|+||.+|+|.++++++|+.|..|++|+.|+
T Consensus 5 ~~~~~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~~~i~Ap~~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 5 KAGEGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp CCCSSEEEBSSSCEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred cCCCeEEECCCCEEEEEEEcCCcCEEcCCCEEEEEEccceeEEEECCCCEEEEEEecCCcCEECCCCEEEEEC
Confidence 3456789999999999999999999999999999999999999999999999999999999999999999874
No 76
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.47 E-value=5.1e-14 Score=119.77 Aligned_cols=68 Identities=25% Similarity=0.260 Sum_probs=64.7
Q ss_pred cCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeC
Q 041518 653 LSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAV 720 (765)
Q Consensus 653 ~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~ 720 (765)
.++++|+|.+|+|++||.|++||+|+++|+|||+++|+||.+|+|.++++++|+.|..|++|++|.++
T Consensus 11 ~~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~~ 78 (79)
T 1ghj_A 11 ESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEGDTVLSGELLGKLTEG 78 (79)
T ss_dssp SSCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTTCEECTTCEEEEECCC
T ss_pred CCCCCEEEEEEEcCCCCEECCCCEEEEEEccceeEEEEcCCCEEEEEEEcCCcCEECCCCEEEEEecC
Confidence 35689999999999999999999999999999999999999999999999999999999999998753
No 77
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=99.46 E-value=7.1e-14 Score=163.77 Aligned_cols=72 Identities=35% Similarity=0.600 Sum_probs=68.5
Q ss_pred CCCCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEE
Q 041518 646 TGPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRL 717 (765)
Q Consensus 646 ~~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i 717 (765)
+.+...|.|||+|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++.+++|+.|..|++|++|
T Consensus 646 ~~~~~~v~ap~~G~V~~v~V~~Gd~V~~Gq~L~~iEamKme~~I~Ap~~G~V~~i~v~~G~~V~~G~~L~~i 717 (718)
T 3bg3_A 646 KDVKGQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLEGDDLILEI 717 (718)
T ss_dssp CCSSSCEECSSCEEEEEECSCTTCCBCTTCCCEEEESSSCEEEECCCCCBCBCCCCCCSEEEECSSCEEECB
T ss_pred CCCCceEeCCCCeEEEEEEeCCCCeeCCCCEEEEEecccceeEEecCCCeEEEEEecCCCCEeCCCCEEEEe
Confidence 345678999999999999999999999999999999999999999999999999999999999999999876
No 78
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=9.8e-14 Score=122.96 Aligned_cols=68 Identities=22% Similarity=0.273 Sum_probs=64.7
Q ss_pred CCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCcc-CCCCeEEEEEeCcc
Q 041518 655 PMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQV-SDGSVLFRLQAVHI 722 (765)
Q Consensus 655 p~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v-~~g~~l~~i~~~~~ 722 (765)
.++|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.| ..|++|++|.....
T Consensus 19 ~~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K~~~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~~~~~ 87 (98)
T 2dnc_A 19 MEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEGE 87 (98)
T ss_dssp CSEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTTCCCEESSCEEEEEECTTS
T ss_pred CccEEEEEEEcCCCCEeCCCCEEEEEEcccceeEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEecCCC
Confidence 479999999999999999999999999999999999999999999999999999 99999999987643
No 79
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.44 E-value=2.6e-13 Score=113.60 Aligned_cols=70 Identities=43% Similarity=0.661 Sum_probs=67.0
Q ss_pred CCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEE
Q 041518 649 PGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQ 718 (765)
Q Consensus 649 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 718 (765)
...|+||++|+|.+|++++||.|++||+|+.+|+|||..+|+||.+|+|.++++++|+.|..|++|+.|+
T Consensus 5 ~~~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 5 ENVVSAPMPGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp CCEEECSSCEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CeEEecCCCEEEEEEEcCCCCEeCCCCEEEEEecccceEEEeCCCCEEEEEEEcCCcCEECCCCEEEEEC
Confidence 3579999999999999999999999999999999999999999999999999999999999999999873
No 80
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=99.43 E-value=4e-14 Score=124.60 Aligned_cols=73 Identities=40% Similarity=0.609 Sum_probs=33.4
Q ss_pred CCCCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEE
Q 041518 646 TGPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQ 718 (765)
Q Consensus 646 ~~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 718 (765)
+.+...|+||++|+|.+|+|++||.|++||+|++||+|||+.+|+||.+|+|.++++++|+.|..|++|++|+
T Consensus 22 ~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~ie 94 (94)
T 2jku_A 22 SMTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDLLVELE 94 (94)
T ss_dssp --CCCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC------------------------------------
T ss_pred CCCceEEECCCCEEEEEEECCCCCEEcCCCEEEEEecccccEEEECCCCEEEEEEcCCCcCEECCCCEEEEEC
Confidence 3455679999999999999999999999999999999999999999999999999999999999999999874
No 81
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=99.43 E-value=1.2e-13 Score=116.79 Aligned_cols=66 Identities=23% Similarity=0.336 Sum_probs=63.9
Q ss_pred cCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEE
Q 041518 653 LSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQ 718 (765)
Q Consensus 653 ~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 718 (765)
.+|++|+|.+|+|++||.|++||+|+.||+|||+.+|+||.+|+|.++++++|+.|..|++|++|+
T Consensus 11 ~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 11 EGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp SSCCCEEEEECSCCTTCEECSCCCCCEEESSSCEEECCCCCCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred CCCccEEEEEEEeCCCCEECCCCEEEEEEccceEEEEECCCCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999999999999999999986
No 82
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.42 E-value=1.8e-13 Score=123.35 Aligned_cols=67 Identities=19% Similarity=0.231 Sum_probs=64.1
Q ss_pred CCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCC-ccCCCCeEEEEEeCc
Q 041518 655 PMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQ-QVSDGSVLFRLQAVH 721 (765)
Q Consensus 655 p~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~-~v~~g~~l~~i~~~~ 721 (765)
..+|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+ .|..|++|++|....
T Consensus 19 ~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i~~~~ 86 (108)
T 2dne_A 19 MQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITVGKP 86 (108)
T ss_dssp CCEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTTCCSEETTCEEEEEESCH
T ss_pred cccEEEEEEEcCCCCEecCCCEEEEEEcCcceeEEeCCCCEEEEEEEeCCCCeeecCCCEEEEEecCc
Confidence 4689999999999999999999999999999999999999999999999999 899999999998753
No 83
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.41 E-value=3.4e-13 Score=124.73 Aligned_cols=66 Identities=21% Similarity=0.241 Sum_probs=63.5
Q ss_pred CcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCC-ccCCCCeEEEEEeCc
Q 041518 656 MAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQ-QVSDGSVLFRLQAVH 721 (765)
Q Consensus 656 ~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~-~v~~g~~l~~i~~~~ 721 (765)
..|+|++|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+ .|..|++|++|++..
T Consensus 40 ~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~i~~~~ 106 (128)
T 1y8o_B 40 TMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKE 106 (128)
T ss_dssp SEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEEEESSG
T ss_pred ccEEEEEEecCCCCEecCCCEEEEEEcCcceeEEeCCCCeEEEEEEeCCCCeeecCCCEEEEEecCc
Confidence 579999999999999999999999999999999999999999999999998 899999999998754
No 84
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.41 E-value=3.6e-13 Score=119.66 Aligned_cols=76 Identities=33% Similarity=0.563 Sum_probs=71.5
Q ss_pred CCCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCcc
Q 041518 647 GPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVHI 722 (765)
Q Consensus 647 ~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~~ 722 (765)
.....|+||++|+|.+|+|++||.|++||+|+.||+|||+.+|+||.+|+|.++++++|+.|..|++|++|.+.+.
T Consensus 12 ~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i~~~~~ 87 (99)
T 2ejm_A 12 ETQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEEEES 87 (99)
T ss_dssp SCCSSCBCSSSEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTTEEECTTCBCEEECCCCS
T ss_pred CCceEEecCCCEEEEEEECCCCCEECCCCEEEEEEccceeEEEECCCCeEEEEEEcCCCCEECCCCEEEEEECCCc
Confidence 4567899999999999999999999999999999999999999999999999999999999999999999986543
No 85
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=99.40 E-value=2.8e-13 Score=149.41 Aligned_cols=169 Identities=16% Similarity=0.205 Sum_probs=120.3
Q ss_pred CHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCC-cEEEeec--CCCCCcc---------EEEECChhHHHHHHH
Q 041518 150 DKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGY-PILIKPT--HGGGGKG---------MRIVQSPNDFVDSFL 217 (765)
Q Consensus 150 DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~-PvVVKP~--~g~Gg~G---------v~~v~s~~el~~a~~ 217 (765)
+++.+|++|+++|||+|++.... +.+++.++++++|| |+|+||. .|+.|+| |++++|.+|+.++++
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~~~~--s~~ea~~~a~~lg~~PvVvK~~i~~GGrGKg~~ks~~~GGV~l~~s~~e~~~a~~ 81 (395)
T 2fp4_B 4 QEYQSKKLMSDNGVKVQRFFVAD--TANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAK 81 (395)
T ss_dssp CHHHHHHHHHHTTCCCCCEEEES--SHHHHHHHHHHHTCSSEEEEECCSSSCGGGCEETTSCBCSEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHHCCcCCCCeEEEC--CHHHHHHHHHHcCCCcEEEEEeeccCCCccCccccCCcCCEEEECCHHHHHHHHH
Confidence 67899999999999999998665 99999999999999 8999995 5555554 999999999999988
Q ss_pred HHHHHHH--hcC---C--CCcEEEecccCCCeeEEEEEEEeccc--cEEEEE-eeecccccc----ceeeeee--cCCCC
Q 041518 218 GAQREAA--ASF---G--INTILLEKYITQPRHIEVQIFGDKYG--KVLHLY-ERDCSVQRR----HQKIIEE--APAPN 281 (765)
Q Consensus 218 ~~~~ea~--~~f---g--~~~vlVEeyI~ggrei~v~v~~d~~g--~vv~l~-~r~~s~~~~----~~k~~e~--~Pa~~ 281 (765)
++..... ..+ + ...++||+|++.++|+.+.++.|... .++.++ +..+.+..- ..++... .|...
T Consensus 82 ~~l~~~~~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~i~~D~~~~~pvi~~s~~GG~~iE~va~~~~d~i~~~~idp~~~ 161 (395)
T 2fp4_B 82 QMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEG 161 (395)
T ss_dssp TTTTSEEECTTSCTTCEECCCEEEEECCCCSEEEEEEEEEETTTTEEEEEEESSCSSCHHHHHHHCGGGCEEEECCTTTC
T ss_pred HHhhcchhhhccCCCCCccceEEEEEccCCceeEEEEEEEccccCceEEEEECCCCccceeccccCCceEEEEecCCCCC
Confidence 7754310 001 1 24799999999889999999999753 455554 323333311 2333333 34445
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCceeEEEE----------EEECCCCcEEEEEecccCC
Q 041518 282 VTHDFRALLGQAAVSAAKAVSYHNAGTVEF----------IVDTVSDQFYFMEMNTRLQ 330 (765)
Q Consensus 282 l~~~~~~~l~~~a~~i~~alg~~G~~~vEf----------~~~~~~g~~~~iEiN~R~~ 330 (765)
+++ ..++++++.+|+.+...-++ +.+ . +++++||||++-
T Consensus 162 l~~-------~~a~~l~~~lg~~~~~~~~~~~~l~~l~~l~~~--~-d~~~lEINPl~~ 210 (395)
T 2fp4_B 162 IKD-------SQAQRMAENLGFLGPLQNQAADQIKKLYNLFLK--I-DATQVEVNPFGE 210 (395)
T ss_dssp CCH-------HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH--T-TEEEEEEEEEEE
T ss_pred CCH-------HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhhh--C-CeEEEEeeeEEE
Confidence 665 44677778888875422111 223 3 599999999995
No 86
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=99.39 E-value=8.1e-13 Score=163.82 Aligned_cols=105 Identities=22% Similarity=0.306 Sum_probs=76.2
Q ss_pred EEEEEeCCeeEEEEEecCCCCCCccccccccccccCCCCCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEE
Q 041518 610 HIHAWHGLHHHHFKQKLGLELPDEDETQHKTSFETATGPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVV 689 (765)
Q Consensus 610 ~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i 689 (765)
.+.+..+|+.+.+.+.+...... ......++++.+...|.|||+|+|++|+|++||.|++||+|++||+|||+++|
T Consensus 1060 ~~~~evnG~~~~v~v~~~~~~~~----~~~~~~~a~~~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~iEamKme~~i 1135 (1165)
T 2qf7_A 1060 TVFFELNGQPRRIKVPDRAHGAT----GAAVRRKAEPGNAAHVGAPMPGVISRVFVSSGQAVNAGDVLVSIEAMKMETAI 1135 (1165)
T ss_dssp EEEEEETTEEEEEEEECGGGTCC----SCCCSCBCCTTCTTEEECSSCEEEEEECCSSCCCC---CEEEEEEC---CEEE
T ss_pred EEEEEECCEEEEEEecCcccccc----cccccccCCCCCCceeeCCCCeEEEEEEcCCcCEeCCCCEEEEEEcccceEEE
Confidence 45555666666666554432100 00011223344567899999999999999999999999999999999999999
Q ss_pred EcCCCeEEEEEEcCCCCccCCCCeEEEEE
Q 041518 690 KAPTTGVVHGLQVTAGQQVSDGSVLFRLQ 718 (765)
Q Consensus 690 ~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 718 (765)
+||.+|+|.++.+++|+.|..|++|++|+
T Consensus 1136 ~Ap~~G~V~~i~v~~G~~V~~g~~l~~i~ 1164 (1165)
T 2qf7_A 1136 HAEKDGTIAEVLVKAGDQIDAKDLLAVYG 1164 (1165)
T ss_dssp ECCSSCCCCEECCCSSCEECTTBEEEEC-
T ss_pred EcCCCEEEEEEEeCCCCEECCCCEEEEec
Confidence 99999999999999999999999999875
No 87
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=99.39 E-value=3.6e-13 Score=148.36 Aligned_cols=169 Identities=17% Similarity=0.188 Sum_probs=119.7
Q ss_pred CHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCc-EEEeecCCCCCc----cEEEECChhHHHHHHHHHHHHHH
Q 041518 150 DKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYP-ILIKPTHGGGGK----GMRIVQSPNDFVDSFLGAQREAA 224 (765)
Q Consensus 150 DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~P-vVVKP~~g~Gg~----Gv~~v~s~~el~~a~~~~~~ea~ 224 (765)
+|+.+|++|+++|||+|++.... +.+++.++++++||| +|+||..+.||| ||++++|.+|+.++++++.....
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~~~~--s~eea~~aa~~lG~P~vVvK~~~~~ggrg~~gGV~l~~s~eel~~a~~~~~~~~~ 81 (388)
T 2nu8_B 4 HEYQAKQLFARYGLPAPVGYACT--TPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRL 81 (388)
T ss_dssp CHHHHHHHHHHTTCCCCCEEEES--SHHHHHHHHHHHCSSCEEEEECCSSSCTTTTTCEEEECSHHHHHHHHHHHTTSEE
T ss_pred CHHHHHHHHHHCCcCCCCeeEEC--CHHHHHHHHHHhCCCeEEEEEecCCCCCCccCCEEEECCHHHHHHHHHHHhhhhh
Confidence 68999999999999999998665 999999999999999 999999876555 99999999999999988753211
Q ss_pred -------hcCCCCcEEEecccCCCeeEEEEEEEecc-c-cEEEEE-ee--eccc-cccc-eeeee--ecCCCCCCHHHHH
Q 041518 225 -------ASFGINTILLEKYITQPRHIEVQIFGDKY-G-KVLHLY-ER--DCSV-QRRH-QKIIE--EAPAPNVTHDFRA 288 (765)
Q Consensus 225 -------~~fg~~~vlVEeyI~ggrei~v~v~~d~~-g-~vv~l~-~r--~~s~-~~~~-~k~~e--~~Pa~~l~~~~~~ 288 (765)
.......+|||+|+++++|+.+.++.|.. | .++.+. +. ++.. ...+ .++.. ..|+..+++..
T Consensus 82 ~t~q~g~~g~~~~~vlVEe~v~~~~E~~v~v~~D~~~g~pvi~~~~~GGv~iE~v~~~~pd~i~~~~i~P~~gl~~~~-- 159 (388)
T 2nu8_B 82 VTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQ-- 159 (388)
T ss_dssp CCTTSCTTCEECCCEEEEECCCEEEEEEEEEEEETTTTEEEEEEESCTTSCHHHHHHHCGGGEEEEECBTTTBCCHHH--
T ss_pred hccccCCCCcccceEEEEEccccCCcEEEEEEEecccCCcEEEEeCCCCcchhhccccCCceEEEEecCCCCCCCHHH--
Confidence 00113579999999988999999999976 3 455554 11 2221 1111 23333 56765677765
Q ss_pred HHHHHHHHHHHHcCCCcee---------EE-EEEEECCCCcEEEEEecccCC
Q 041518 289 LLGQAAVSAAKAVSYHNAG---------TV-EFIVDTVSDQFYFMEMNTRLQ 330 (765)
Q Consensus 289 ~l~~~a~~i~~alg~~G~~---------~v-Ef~~~~~~g~~~~iEiN~R~~ 330 (765)
++++++.+|+.+.. .+ +++.+ . .++++||||++-
T Consensus 160 -----a~~~~~~lG~~~~~~~~~~~~l~~l~~~~~~--~-d~~~lEINPl~~ 203 (388)
T 2nu8_B 160 -----GRELAFKLGLEGKLVQQFTKIFMGLATIFLE--R-DLALIEINPLVI 203 (388)
T ss_dssp -----HHHHHHHTTCCTHHHHHHHHHHHHHHHHHHH--T-TEEEEEEEEEEE
T ss_pred -----HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHh--C-CEEEEEecceEE
Confidence 34445556776421 01 12223 3 599999999986
No 88
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.38 E-value=1.2e-13 Score=117.93 Aligned_cols=70 Identities=23% Similarity=0.328 Sum_probs=66.2
Q ss_pred ccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 652 VLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 652 v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
+.++++|+|.+|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|++|.+.+
T Consensus 10 ~g~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~~~ 79 (81)
T 1gjx_A 10 IGGHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEG 79 (81)
T ss_dssp CSSCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSSCEECSSSCCCEECCSC
T ss_pred CCCCCcEEEEEEEcCCCCEECCCCEEEEEEeCCcEEEEECCCCEEEEEEecCCCCEeCCCCEEEEEEecC
Confidence 4468999999999999999999999999999999999999999999999999999999999999997653
No 89
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.37 E-value=8.6e-14 Score=120.16 Aligned_cols=71 Identities=31% Similarity=0.419 Sum_probs=67.7
Q ss_pred cccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 651 SVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 651 ~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
.|++|..|+|.+|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|+.|...+
T Consensus 4 ~i~~p~~G~v~~~~v~~Gd~V~~G~~L~~ie~~k~~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~~~ 74 (85)
T 2k7v_A 4 EVNVPDIVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEG 74 (85)
T ss_dssp CCCCCSCCCCCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTTCCBCTTSEEEEEECCS
T ss_pred EEECCCeEEEEEEEcCCCCEEcCCCEEEEEEccccEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEEcCC
Confidence 47788889999999999999999999999999999999999999999999999999999999999998754
No 90
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.36 E-value=6.5e-13 Score=113.13 Aligned_cols=65 Identities=31% Similarity=0.441 Sum_probs=63.1
Q ss_pred cceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 657 AGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 657 ~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
+|+|.+|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|+.|.+.+
T Consensus 14 ~G~v~~~~v~~G~~V~~G~~l~~ie~~~~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~~ 78 (80)
T 1qjo_A 14 EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEG 78 (80)
T ss_dssp CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTTCEECTTCCCEEEESCC
T ss_pred CEEEEEEEcCCCCEECCCCEEEEEEcCCceEEEeCCCCEEEEEEecCCCCEECCCCEEEEEEccC
Confidence 99999999999999999999999999999999999999999999999999999999999998754
No 91
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=99.35 E-value=2.7e-13 Score=141.00 Aligned_cols=202 Identities=14% Similarity=0.107 Sum_probs=134.2
Q ss_pred CCEEEeCC--CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCH----------H
Q 041518 110 AQAIHPGY--GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDI----------D 177 (765)
Q Consensus 110 ~DaV~pg~--g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~----------~ 177 (765)
+|.+++-| ||-. ....+.++..+. +.-++..+...++||..+.++|+++|||+|++........ +
T Consensus 58 ~d~lisf~s~gfpl--~kai~y~~lr~p-~~INd~~~q~~~~DK~~~~~iL~~~gIPtP~t~~~~rd~~~~~~~~~~e~~ 134 (330)
T 3t7a_A 58 CDCLISFHSKGFPL--DKAVAYAKLRNP-FVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRDPNNPKECNLIEGE 134 (330)
T ss_dssp CSEEEECCCTTCCH--HHHHHHHHHHCC-EESBCSTHHHHHTBHHHHHHHHHHTTCCCCCEEEECCBTTBGGGSSEEECS
T ss_pred CCEEEEeccCCCcH--HHHHHHHHHhCC-ceeCCHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCccccceeccc
Confidence 57777665 3322 233455555554 4558999999999999999999999999999876542110 1
Q ss_pred HHHH-HHHHhCCcEEEeecCCC---------------CCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccC-C
Q 041518 178 LMKS-EAAKIGYPILIKPTHGG---------------GGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYIT-Q 240 (765)
Q Consensus 178 e~~~-~~~~ig~PvVVKP~~g~---------------Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~-g 240 (765)
+..+ ....+++|+|+||..|. +++-++++.|.+.....-... + .+..+|+||||+ .
T Consensus 135 d~i~~~g~~l~kPfVeKPv~Gsdhni~iyyp~s~GgG~~RLfrki~n~sS~~~~~~~v-r------~~~~~i~QEFI~~~ 207 (330)
T 3t7a_A 135 DHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNV-R------KTGSYIYEEFMPTD 207 (330)
T ss_dssp SEEEETTEEEESSEEEEESBTTCCCCEEECCGGGTCCEEEEEEEETTEEEEEESCCSC-C------SSSCEEEEECCCCS
T ss_pred hhhhhccccccCCeeEcccccccCcceeecccccCCchhhhhhhhCCcccccChhhhh-c------cCCcEEEEeccCCC
Confidence 1111 12456799999999995 224455676654421100000 1 157999999998 4
Q ss_pred CeeEEEEEEEeccccEEEEEeeeccc----cccceeeeee-cCCCCCCHHHHHHHHHHHHHHHHHcCCCceeEEEEEEEC
Q 041518 241 PRHIEVQIFGDKYGKVLHLYERDCSV----QRRHQKIIEE-APAPNVTHDFRALLGQAAVSAAKAVSYHNAGTVEFIVDT 315 (765)
Q Consensus 241 grei~v~v~~d~~g~vv~l~~r~~s~----~~~~~k~~e~-~Pa~~l~~~~~~~l~~~a~~i~~alg~~G~~~vEf~~~~ 315 (765)
|+.+.+-+++ +++++...|..+. .+++....+. .|. .+++ +..++|.++++++|. +++.||++.+
T Consensus 208 G~DIRv~vVG---~~vv~Am~R~sp~~~G~~r~N~~gG~~~~~v-~Lt~----eek~iA~kaa~a~G~-~v~GVDlLrs- 277 (330)
T 3t7a_A 208 GTDVKVYTVG---PDYAHAEARKSPALDGKVERDSEGKEVRYPV-ILNA----REKLIAWKVCLAFKQ-TVCGFDLLRA- 277 (330)
T ss_dssp SEEEEEEEES---TTCEEEEEEECTTSSCBCCBCTTSCBCCEEC-CCCH----HHHHHHHHHHHHTTB-SEEEEEEEEE-
T ss_pred CceEEEEEEC---CEEEEEEEEeCCCCCCcEEEcCCCCceeeee-cCCH----HHHHHHHHHHHHhCC-ceEEEEEEEE-
Confidence 6888887774 3667777775431 1222111221 344 4665 457899999999998 8889999999
Q ss_pred CCCcEEEEEecccCCcc
Q 041518 316 VSDQFYFMEMNTRLQVE 332 (765)
Q Consensus 316 ~~g~~~~iEiN~R~~~~ 332 (765)
++++|++|+|.+..+-
T Consensus 278 -~~~~~V~EVNg~~fvk 293 (330)
T 3t7a_A 278 -NGQSYVCDVNGFSFVK 293 (330)
T ss_dssp -TTEEEEEEEEESCCCS
T ss_pred -CCccEEEEeCCCcccc
Confidence 5779999999999743
No 92
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.34 E-value=1.8e-12 Score=110.22 Aligned_cols=64 Identities=28% Similarity=0.513 Sum_probs=61.8
Q ss_pred cceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 657 AGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 657 ~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
+ +|.+|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|+.|.+.+
T Consensus 13 ~-~i~~~~v~~Gd~V~~G~~l~~le~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~~~ 76 (79)
T 1iyu_A 13 G-EVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEPAA 76 (79)
T ss_dssp E-EEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTTCEEETTSEEEEEECCC
T ss_pred C-EEEEEecCCCCEEcCCCEEEEEEccceEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEecCC
Confidence 6 999999999999999999999999999999999999999999999999999999999998754
No 93
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=99.34 E-value=1.2e-12 Score=162.35 Aligned_cols=70 Identities=30% Similarity=0.405 Sum_probs=67.4
Q ss_pred CCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEE
Q 041518 648 PPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRL 717 (765)
Q Consensus 648 ~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i 717 (765)
+...|+|||+|+|++|+|++||.|++||+|++||||||+++|+||.+|+|.++++++||.|..|++|++|
T Consensus 1166 ~~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~v~ap~~G~v~~i~v~~G~~V~~G~~l~~i 1235 (1236)
T 3va7_A 1166 DAELLYSEYTGRFWKPVAAVGDHVEAGDGVIIIEAMKTEMVVGATKSGKVYKILHKNGDMVEAGDLVAVI 1235 (1236)
T ss_dssp TCEEEECSSCEEEEEESSCTTCEECSSCEEEEEEETTEEEEEECSSCEEEEEECCCTTCEECTTCEEEEE
T ss_pred CCcEEeCCCcEEEEEEEcCCCCEECCCCEEEEEEecCcceeEecCCCeEEEEEEeCCcCEeCCCCEEEEe
Confidence 3457999999999999999999999999999999999999999999999999999999999999999987
No 94
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.30 E-value=6.1e-14 Score=119.64 Aligned_cols=65 Identities=20% Similarity=0.255 Sum_probs=62.7
Q ss_pred CCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEe
Q 041518 655 PMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQA 719 (765)
Q Consensus 655 p~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~ 719 (765)
..+|+|.+|+|++||.|++||+|++||+|||+++|+||.+|+|.++++++|+.|..|++|++|++
T Consensus 14 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 14 VADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred CccEEEEEEECCCcCEECCCCEEEEEEccceEEEEECCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 57999999999999999999999999999999999999999999999999999999999998865
No 95
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=99.13 E-value=3.5e-11 Score=112.12 Aligned_cols=72 Identities=24% Similarity=0.314 Sum_probs=66.6
Q ss_pred cccCCCcceEEEEEc-CCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEE---EcCCCCccC---CCC-eEEEEEeCcc
Q 041518 651 SVLSPMAGLVVKVLA-NDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGL---QVTAGQQVS---DGS-VLFRLQAVHI 722 (765)
Q Consensus 651 ~v~ap~~G~v~~~~v-~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~---~~~~G~~v~---~g~-~l~~i~~~~~ 722 (765)
.+.+|++|.|+.+.+ ++||.|++||+|++||+|||+.+|.||.+|+|.++ +++.|+.|. .|+ .|++|++.+.
T Consensus 38 ~~a~~~lG~i~~V~lp~vGd~V~~Gd~l~~VEs~K~~~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~~i~~~~~ 117 (136)
T 1zko_A 38 NHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISDE 117 (136)
T ss_dssp HHHHHHHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEEEEESCG
T ss_pred hhhcccCCCcEEEEecCCCCEEeCCCEEEEEEEccEeEEEecCCCeEEEEEehhhccCccCcccCCCCCeEEEEEEECCH
Confidence 367899999999988 99999999999999999999999999999999999 678999999 888 9999998753
No 96
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=99.07 E-value=1e-09 Score=121.18 Aligned_cols=103 Identities=17% Similarity=0.311 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecCCCCCc----cEEEECChhHHHHHHHHHHHHHHh
Q 041518 150 DKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTHGGGGK----GMRIVQSPNDFVDSFLGAQREAAA 225 (765)
Q Consensus 150 DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~g~Gg~----Gv~~v~s~~el~~a~~~~~~ea~~ 225 (765)
+-+.+|++|+++|||+|++.... +.+++.++++++|||+|+||....||| ||++++|.+|+.++++++......
T Consensus 4 ~E~~aK~lL~~~GIpvp~~~~~~--s~eea~~aa~~lG~PvVvKa~~~~ggkg~~GGV~l~~s~ee~~~a~~~~~~~~~~ 81 (397)
T 3ufx_B 4 HEYQAKEILARYGVPVPPGKVAY--TPEEAKRIAEEFGKRVVIKAQVHVGGRGKAGGVKLADTPQEAYEKAQAILGMNIK 81 (397)
T ss_dssp CHHHHHHHHHHTTCCCCCEEEES--SHHHHHHHHHHHTSCEEEEECCSSSCTTTTTCEEEESSHHHHHHHHHHHTTCEET
T ss_pred CHHHHHHHHHHCCCCCCCeEEEC--CHHHHHHHHHHcCCCEEEEEccccCCCCccceEEEeCCHHHHHHHHHHhhhhhcc
Confidence 45788999999999999998765 999999999999999999999865555 999999999999999887532111
Q ss_pred cCCCCcEEEecccCCCeeEEEEEEEeccc
Q 041518 226 SFGINTILLEKYITQPRHIEVQIFGDKYG 254 (765)
Q Consensus 226 ~fg~~~vlVEeyI~ggrei~v~v~~d~~g 254 (765)
.+....++||+|++.++|+.+.++.|...
T Consensus 82 g~~~~~vlVEe~v~~g~El~vgv~~D~~~ 110 (397)
T 3ufx_B 82 GLTVKKVLVAEAVDIAKEYYAGLILDRAK 110 (397)
T ss_dssp TEECCCEEEEECCCEEEEEEEEEEEETTT
T ss_pred CCccceEEEEEeecCCeeEEEEEEecCCC
Confidence 11236899999999889999999999754
No 97
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=99.00 E-value=3.5e-11 Score=133.91 Aligned_cols=65 Identities=25% Similarity=0.337 Sum_probs=0.0
Q ss_pred cceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 657 AGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 657 ~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
.|+|++|+|++||.|++||+|++||+|||+++|.||.+|+|.++++++|+.|..|++|+.|+.++
T Consensus 16 eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~~~ 80 (428)
T 3dva_I 16 EGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLDAPG 80 (428)
T ss_dssp -----------------------------------------------------------------
T ss_pred cEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecCC
Confidence 59999999999999999999999999999999999999999999999999999999999998643
No 98
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=98.99 E-value=2.7e-10 Score=104.00 Aligned_cols=71 Identities=27% Similarity=0.472 Sum_probs=65.9
Q ss_pred cccCCCcceEEEEEcCCCCeecCCCeEEEEEecceE-----------------------------EEEEcCCCeEEEEEE
Q 041518 651 SVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKME-----------------------------HVVKAPTTGVVHGLQ 701 (765)
Q Consensus 651 ~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~-----------------------------~~i~ap~~G~v~~~~ 701 (765)
.|.||++|+|.+|+|++||.|++||+|+.|++.+.+ ..|+||.+|+|.++.
T Consensus 3 ~v~a~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~a~~~~~r~~~L~~~~~~s~~~~~~~~~~~~~~~i~AP~~G~V~~~~ 82 (116)
T 2k32_A 3 IIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDAL 82 (116)
T ss_dssp EECCSSCEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCS
T ss_pred EEeCcCCEEEEEEECCCcCEECCCCEEEEECHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHhhcCCEEEcCCCEEEEEEE
Confidence 489999999999999999999999999999987655 499999999999999
Q ss_pred cCCCCccCCC-CeEEEEEeCc
Q 041518 702 VTAGQQVSDG-SVLFRLQAVH 721 (765)
Q Consensus 702 ~~~G~~v~~g-~~l~~i~~~~ 721 (765)
+++|+.|..| ++|+.|.+.+
T Consensus 83 ~~~G~~v~~g~~~l~~i~~~~ 103 (116)
T 2k32_A 83 VNIGDYVSASTTELVRVTNLN 103 (116)
T ss_dssp CCTTCEECTTTSCCEEEECSC
T ss_pred CCCCCEEcCCCcEEEEEECCC
Confidence 9999999999 9999998764
No 99
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=98.97 E-value=5.7e-11 Score=120.99 Aligned_cols=65 Identities=23% Similarity=0.346 Sum_probs=0.0
Q ss_pred CcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCc-cCCCCeEEEEEeC
Q 041518 656 MAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQ-VSDGSVLFRLQAV 720 (765)
Q Consensus 656 ~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~-v~~g~~l~~i~~~ 720 (765)
..|+|++|+|++||.|++||+|++||+|||+++|.||.+|+|.++++++|+. |..|++|++|+.+
T Consensus 16 ~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~~~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~~~ 81 (229)
T 1zy8_K 16 EEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEE 81 (229)
T ss_dssp ------------------------------------------------------------------
T ss_pred CcEEEEEEecCCCCEeCCCCEEEEEecCCceeEEecCCCeEEEEEEecCCCeeecCCCEEEEEecc
Confidence 5799999999999999999999999999999999999999999999999997 9999999999743
No 100
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=98.80 E-value=2.9e-09 Score=98.65 Aligned_cols=70 Identities=19% Similarity=0.226 Sum_probs=61.4
Q ss_pred ccCCCcceEEEEEc-CCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCC---CccC---CCC-eEEEEEeCc
Q 041518 652 VLSPMAGLVVKVLA-NDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAG---QQVS---DGS-VLFRLQAVH 721 (765)
Q Consensus 652 v~ap~~G~v~~~~v-~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G---~~v~---~g~-~l~~i~~~~ 721 (765)
...|+.|.|+.+.+ ++||.|++||+|++||+|||..+|.||.+|+|.+++.+.+ +.|. .|+ -|++|...+
T Consensus 30 ~a~~~lG~i~~v~lp~~G~~V~~g~~l~~vEs~K~~~~I~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~~~~ 107 (131)
T 1hpc_A 30 HAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPTS 107 (131)
T ss_dssp HHHHHHCSEEEEECCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHHHCTTHHHHCTTTTTCCEEEEESS
T ss_pred hhcccCCCceEEEecCCCCEEeCCCEEEEEEecceeEEEecCCCeEEEEEhhhhhcChhhhccCCCCCceEEEEEECC
Confidence 56789999999988 9999999999999999999999999999999999986544 4564 455 899999875
No 101
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=98.70 E-value=2.5e-08 Score=92.07 Aligned_cols=71 Identities=27% Similarity=0.383 Sum_probs=62.0
Q ss_pred ccCCCcceEEEEEc-CCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcC---CCCcc---CCCC-eEEEEEeCcc
Q 041518 652 VLSPMAGLVVKVLA-NDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVT---AGQQV---SDGS-VLFRLQAVHI 722 (765)
Q Consensus 652 v~ap~~G~v~~~~v-~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~---~G~~v---~~g~-~l~~i~~~~~ 722 (765)
...|+.|.|+.+.+ ++|+.|++||++++||+|||..+|.||.+|+|.+++.+ ..+.| ..|+ -|++|...+.
T Consensus 30 ~a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~~~~~ 108 (128)
T 1onl_A 30 YAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLKPRDM 108 (128)
T ss_dssp HHHHHHCSEEEEECBCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTHHHHCTTHHHHCTTTTTCCEEEEESCG
T ss_pred HHhhcCCCceEEEecCCCCEEeCCCEEEEEEEcceeeEEecCCCeEEEEEhhhhccChhhhccCCCCCccEEEEEECCH
Confidence 56789999999987 99999999999999999999999999999999999864 55566 5676 8999997753
No 102
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=98.63 E-value=2.8e-08 Score=91.71 Aligned_cols=71 Identities=21% Similarity=0.266 Sum_probs=61.9
Q ss_pred ccCCCcceEEEEEc-CCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcC---CCCccC---CCC-eEEEEEeCcc
Q 041518 652 VLSPMAGLVVKVLA-NDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVT---AGQQVS---DGS-VLFRLQAVHI 722 (765)
Q Consensus 652 v~ap~~G~v~~~~v-~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~---~G~~v~---~g~-~l~~i~~~~~ 722 (765)
...|+.|.|+.+.+ ++|+.|++||++++||+|||..+|.||.+|+|.+++.+ ..+.|. .|+ -|+.|...+.
T Consensus 31 ~a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evN~~l~~~P~lvn~dpy~~gWl~~i~~~~~ 109 (128)
T 3a7l_A 31 HAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDE 109 (128)
T ss_dssp HHHHHHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGTCTTHHHHCTTTTTCCEEEEESCG
T ss_pred HHhccCCceEEEEecCCCCEEeCCCEEEEEEecceeeEEecCCCeEEEEEhhhhccChHHhccCCCCCccEEEEEECCH
Confidence 56789999999987 99999999999999999999999999999999999864 455566 666 8999987753
No 103
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=98.17 E-value=2.4e-06 Score=95.08 Aligned_cols=71 Identities=30% Similarity=0.548 Sum_probs=64.0
Q ss_pred CcccCCCcceEEEEEc-CCCCeecCCCeEEEEEe----------------------------------------------
Q 041518 650 GSVLSPMAGLVVKVLA-NDGTKVEEGQPILVLEA---------------------------------------------- 682 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v-~~Gd~V~~G~~l~~~ea---------------------------------------------- 682 (765)
..|.++.+|+|.+++| ++||.|++||+|+.|++
T Consensus 122 ~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~l~~aq~~~~~a~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~~ 201 (413)
T 3ne5_B 122 AIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIAT 201 (413)
T ss_dssp EEECCSSCEEEEEECSCCTTCEECTTCEEEEEECCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEEecccCEEEEEEEeCCCCCEEcCCCEEEEEcCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 4589999999999999 99999999999999993
Q ss_pred --cceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeC
Q 041518 683 --MKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAV 720 (765)
Q Consensus 683 --mKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~ 720 (765)
..-...|+||++|+|.++.+++|+.|.+|++|++|.+.
T Consensus 202 ~~~~~~~~I~AP~~G~V~~~~v~~G~~V~~G~~l~~I~~~ 241 (413)
T 3ne5_B 202 QKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGM 241 (413)
T ss_dssp TSCCCEEEEECSSSEEEEECCCCTTCEECTTSCSEEEEEE
T ss_pred ccccccEEEEcCCCeEEEEEEcCCCCEECCCCcEEEEeCC
Confidence 12357899999999999999999999999999999754
No 104
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=98.12 E-value=2.2e-06 Score=93.22 Aligned_cols=73 Identities=23% Similarity=0.415 Sum_probs=65.0
Q ss_pred CCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecce-------------------------------------------
Q 041518 649 PGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKM------------------------------------------- 685 (765)
Q Consensus 649 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm------------------------------------------- 685 (765)
...|.||.+|+|.+++|++||.|++||+|+.|+.-..
T Consensus 57 ~~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~~~a~~ 136 (359)
T 3lnn_A 57 LVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQS 136 (359)
T ss_dssp EEEECCSSCEEEEECCSCTTCEECTTCEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTHHHHHH
T ss_pred EEEEeccCCEEEEEEEcCCCCEEcCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 4569999999999999999999999999999985321
Q ss_pred ---------------------------------EEEEEcCCCeEEEEEEcCCCCccCC-CCeEEEEEeCc
Q 041518 686 ---------------------------------EHVVKAPTTGVVHGLQVTAGQQVSD-GSVLFRLQAVH 721 (765)
Q Consensus 686 ---------------------------------~~~i~ap~~G~v~~~~~~~G~~v~~-g~~l~~i~~~~ 721 (765)
...|+||++|+|.++.+.+|+.|.. |++|+.|.+.+
T Consensus 137 ~~~~a~a~l~~a~~~l~~~~~~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~~v~~~g~~l~~i~~~~ 206 (359)
T 3lnn_A 137 DYDQAASESQRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATGAYWNDTTASLMTVADLS 206 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGBCSSTTSEEEEECSSCEEEEECCCCBTCEECCSSCCSEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcchhhhhcccceEEEECCCCEEEEEeecCCCceeCCCCcceEEEecCC
Confidence 3689999999999999999999999 99999987653
No 105
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=98.11 E-value=7.1e-07 Score=93.63 Aligned_cols=72 Identities=22% Similarity=0.418 Sum_probs=63.4
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEEecc---------------------------------------------
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMK--------------------------------------------- 684 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamK--------------------------------------------- 684 (765)
..|.||.+|+|.+++|++||.|++||+|+.|+.-.
T Consensus 23 ~~v~a~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~ 102 (277)
T 2f1m_A 23 AEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQ 102 (277)
T ss_dssp EEECCSSCEEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHH
T ss_pred EEEEccccEEEEEEEcCCCCEecCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHH
Confidence 46899999999999999999999999999998521
Q ss_pred --------------------------eEEEEEcCCCeEEEEEEcCCCCccCCC--CeEEEEEeCc
Q 041518 685 --------------------------MEHVVKAPTTGVVHGLQVTAGQQVSDG--SVLFRLQAVH 721 (765)
Q Consensus 685 --------------------------m~~~i~ap~~G~v~~~~~~~G~~v~~g--~~l~~i~~~~ 721 (765)
-...|+||++|+|..+.+++|+.|.+| ++|+.|.+.+
T Consensus 103 a~~~~~~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~~~~G~~v~~g~~~~l~~i~~~~ 167 (277)
T 2f1m_A 103 ALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLD 167 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCCSSCBTCEECTTCSSCSEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeEEcCCCCEEcCCCCceeEEEecCC
Confidence 124899999999999999999999999 5899997654
No 106
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=98.07 E-value=2.6e-06 Score=92.01 Aligned_cols=72 Identities=21% Similarity=0.253 Sum_probs=62.8
Q ss_pred CCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecc--------------------------------------------
Q 041518 649 PGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMK-------------------------------------------- 684 (765)
Q Consensus 649 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamK-------------------------------------------- 684 (765)
...|.+|.+|+|.+++|++||.|++||+|+.|+.-.
T Consensus 31 ~~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~ 110 (341)
T 3fpp_A 31 KVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQA 110 (341)
T ss_dssp EEECCCSSCEEEEEECCCTTCEECTTCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSS
T ss_pred EEEEeccCCcEEEEEEeCCCCEECCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 356899999999999999999999999999998521
Q ss_pred -----------------------------------------eEEEEEcCCCeEEEEEEcCCCCccCCCCe---EEEEEeC
Q 041518 685 -----------------------------------------MEHVVKAPTTGVVHGLQVTAGQQVSDGSV---LFRLQAV 720 (765)
Q Consensus 685 -----------------------------------------m~~~i~ap~~G~v~~~~~~~G~~v~~g~~---l~~i~~~ 720 (765)
-...|+||++|+|.++.+.+|+.|..|++ |+.|.+.
T Consensus 111 ~s~~~~~~a~~~~~~~~a~l~~~~a~l~~a~a~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~~ 190 (341)
T 3fpp_A 111 VSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADM 190 (341)
T ss_dssp STTHHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHTTTTTTTTSSEEECSSSEEEEEESSCTTCEECCTTSCCCCEEEECC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCEEECCCCeEEEEEecCCCCEEecCCCCceEEEEecC
Confidence 11569999999999999999999999987 8888753
No 107
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=98.02 E-value=7.5e-06 Score=74.82 Aligned_cols=67 Identities=21% Similarity=0.251 Sum_probs=54.9
Q ss_pred CCcceEEEEEc-CCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCc---cC---CCC-eEEEEEeCc
Q 041518 655 PMAGLVVKVLA-NDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQ---VS---DGS-VLFRLQAVH 721 (765)
Q Consensus 655 p~~G~v~~~~v-~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~---v~---~g~-~l~~i~~~~ 721 (765)
.+.|.|+.+.+ ++|+.|++||++++||+||+..+|.||.+|+|.+++....+. |. .|+ =|+.|...+
T Consensus 29 ~~lGdiv~velp~vG~~v~~G~~~~~VES~K~~sdi~aPvsG~VvevN~~l~~~P~liN~dpy~~gWl~ki~~~~ 103 (125)
T 3klr_A 29 EALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALAENPGLVNKSCYEDGWLIKMTFSN 103 (125)
T ss_dssp HHHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGTTCTTHHHHCTTTTTCCEEEEESC
T ss_pred hhCCCeEEEEeCCCCCEEcCCCEEEEEEEcceeeeeecCCCEEEEEEhhhhhhChHhhcCCCCCCceEEEEEECC
Confidence 46788998877 799999999999999999999999999999999998654432 32 344 477787664
No 108
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=97.87 E-value=3.7e-06 Score=92.01 Aligned_cols=72 Identities=24% Similarity=0.430 Sum_probs=63.0
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEEecc---------------------------------------------
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMK--------------------------------------------- 684 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamK--------------------------------------------- 684 (765)
..|.++.+|+|.+++|++||.|++||+|+.|+.-.
T Consensus 44 ~~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~~~ 123 (369)
T 1vf7_A 44 AEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQ 123 (369)
T ss_dssp EEECCSSCEEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred EEEEeeCceEEEEEEcCCCCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHH
Confidence 45899999999999999999999999999997421
Q ss_pred ------------eEEEEEcCCCeEEEEEEcCCCCccCCC--CeEEEEEeCc
Q 041518 685 ------------MEHVVKAPTTGVVHGLQVTAGQQVSDG--SVLFRLQAVH 721 (765)
Q Consensus 685 ------------m~~~i~ap~~G~v~~~~~~~G~~v~~g--~~l~~i~~~~ 721 (765)
-...|+||++|+|.++.+++|+.|.+| ++|+.|...+
T Consensus 124 a~a~l~~a~~~l~~~~I~AP~~G~V~~~~v~~G~~V~~g~g~~l~~i~~~~ 174 (369)
T 1vf7_A 124 SKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLD 174 (369)
T ss_dssp HHHHHHHHHHHHHTTEEECSSSEEECCCSSCBTCEECTTCSSCSEEEECCS
T ss_pred HHHHHHHHHHhhcCCEEECCCCeEEEEEEcCCCCeEcCCCCceeEEEecCC
Confidence 125899999999999999999999995 8999997643
No 109
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.79 E-value=3e-05 Score=72.13 Aligned_cols=66 Identities=24% Similarity=0.364 Sum_probs=53.2
Q ss_pred CcceEEEEEc-CCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCc---c---CCCC-eEEEEEeCc
Q 041518 656 MAGLVVKVLA-NDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQ---V---SDGS-VLFRLQAVH 721 (765)
Q Consensus 656 ~~G~v~~~~v-~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~---v---~~g~-~l~~i~~~~ 721 (765)
.-|.|+-|.. ++|+.|++||++++||+||+..+|.||.+|+|.+++-+..+. | ..|+ =|+.|+..+
T Consensus 52 ~LGdIvfVelP~vG~~v~~Gd~~~~VES~Ka~sdi~sPvsG~VvevN~~L~d~PeliN~dPy~~GWl~ki~~~d 125 (143)
T 3mxu_A 52 QLGDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAALAESPELVNQKAETEGWLWKMTVQD 125 (143)
T ss_dssp HHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGTCTTHHHHSTTTTTCCEEEECSC
T ss_pred hcCCeEEEEcCCCCCEeeCCCEEEEEEecceeeeeecCcceEEEEEhhhhhhChHhhhCCCCCCCeEEEEEECC
Confidence 4678887766 899999999999999999999999999999999998655443 1 2332 577777654
No 110
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=97.78 E-value=2.5e-05 Score=72.38 Aligned_cols=49 Identities=22% Similarity=0.247 Sum_probs=44.3
Q ss_pred CCcceEEEEEc-CCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcC
Q 041518 655 PMAGLVVKVLA-NDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVT 703 (765)
Q Consensus 655 p~~G~v~~~~v-~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~ 703 (765)
.+-|.|+-+.. ++|+.|++||++++||+||+..+|.||.+|+|.+++-+
T Consensus 46 ~~lGdiv~VelP~vG~~v~~G~~~~~VES~K~~sdi~sPvsG~VvevN~~ 95 (137)
T 3tzu_A 46 EALGDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVNTA 95 (137)
T ss_dssp HHHCSEEEEECCCTTCEECTTSEEEEEEESSEEEEEECSEEEEEEEECHH
T ss_pred hhcCCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEehhh
Confidence 45788988876 89999999999999999999999999999999999743
No 111
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=97.66 E-value=2.9e-05 Score=74.29 Aligned_cols=70 Identities=21% Similarity=0.371 Sum_probs=61.4
Q ss_pred CCCCCcccCCCcceEEEEEcCCCCeecC----CCeEEEEEecceEEEEEcCCCeEEEEE---------------------
Q 041518 646 TGPPGSVLSPMAGLVVKVLANDGTKVEE----GQPILVLEAMKMEHVVKAPTTGVVHGL--------------------- 700 (765)
Q Consensus 646 ~~~~~~v~ap~~G~v~~~~v~~Gd~V~~----G~~l~~~eamKm~~~i~ap~~G~v~~~--------------------- 700 (765)
+.....|.||++|+|+.+ .++.|.|-. |+.++...+ +..++||++|+|..+
T Consensus 9 p~~~~~i~aP~~G~vv~l-~~v~D~vfs~~~~G~Giai~p~---~~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHI 84 (162)
T 1ax3_A 9 EIGEEVFVSPITGEIHPI-TDVPDQVFSGKMMGDGFAILPS---EGIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHF 84 (162)
T ss_dssp TTCCSSCCCCCSEEEEEG-GGSSSHHHHTCTTSEEEEEEEC---SSEEEESCCEEEEECCSSSSEEEEESSSSCEEEEEC
T ss_pred CCCCCEEEecCceEEEEe-EECCCccccccceeceEEEEeC---CCcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEE
Confidence 344567999999999998 788998888 899998887 678999999999988
Q ss_pred --------------EcCCCCccCCCCeEEEEEe
Q 041518 701 --------------QVTAGQQVSDGSVLFRLQA 719 (765)
Q Consensus 701 --------------~~~~G~~v~~g~~l~~i~~ 719 (765)
++++||.|..|++|+++..
T Consensus 85 GidTV~l~G~gF~~~V~~Gd~V~~G~~L~~~d~ 117 (162)
T 1ax3_A 85 GIDTVSLKGEGFTSFVSEGDRVEPGQKLLEVDL 117 (162)
T ss_dssp SSSTTTTTTTTEEESCCCCSEECSEEEEEEECH
T ss_pred CccchhcCCCccEEEEeCCCEEcCCCEEEEECH
Confidence 8899999999999999973
No 112
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=97.63 E-value=3.2e-06 Score=92.25 Aligned_cols=72 Identities=18% Similarity=0.328 Sum_probs=61.7
Q ss_pred CCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecc-------------------------------------------
Q 041518 648 PPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMK------------------------------------------- 684 (765)
Q Consensus 648 ~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamK------------------------------------------- 684 (765)
....|.+|.+|+|.+++|++||.|++||+|+.|+.-.
T Consensus 31 ~~~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~ 110 (369)
T 4dk0_A 31 NTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQK 110 (369)
T ss_dssp SCCCBCCCSCSBCCEECCCTTSCCCSSCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSS
T ss_pred eeEEEecCCCcEEEEEEECCCCEECCCCEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4467999999999999999999999999999998531
Q ss_pred ------------------------------------------eEEEEEcCCCeEEEEEEcCCCCccCCCCe---EEEEEe
Q 041518 685 ------------------------------------------MEHVVKAPTTGVVHGLQVTAGQQVSDGSV---LFRLQA 719 (765)
Q Consensus 685 ------------------------------------------m~~~i~ap~~G~v~~~~~~~G~~v~~g~~---l~~i~~ 719 (765)
-...|+||++|+|.++.+++|+.|.+|++ |+.|..
T Consensus 111 ~~s~~~~~~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~ 190 (369)
T 4dk0_A 111 ATSLDTLNTAKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVAD 190 (369)
T ss_dssp CSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCSCCSCCCBCCCCTTCBCCTTTSCCCCBBCCC
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEEeeCCCCCCccCCCCcceEEEEcC
Confidence 01359999999999999999999999998 665543
No 113
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A*
Probab=97.61 E-value=0.00045 Score=75.07 Aligned_cols=155 Identities=19% Similarity=0.323 Sum_probs=89.6
Q ss_pred CCcEEEeecCCCCCccEEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCC-------Ce--eEEEEEEEeccccEE
Q 041518 187 GYPILIKPTHGGGGKGMRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQ-------PR--HIEVQIFGDKYGKVL 257 (765)
Q Consensus 187 g~PvVVKP~~g~Gg~Gv~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~g-------gr--ei~v~v~~d~~g~vv 257 (765)
+.+.|+||..|+.|+|++++++.+++.+.++.. ...++||+||+. ++ ++.+-++....-. +
T Consensus 147 ~~~wI~KP~~~srG~GI~l~~~~~~i~~~~~~~---------~~~~VvQkYI~~PlLi~~~grKFDlR~Yvlvts~l~-v 216 (380)
T 3tig_A 147 GNVWIAKSSSGAKGEGILISSDATELLDFIDNQ---------GQVHVIQKYLESPLLLEPGHRKFDIRSWVLVDNQYN-I 216 (380)
T ss_dssp CCCEEEEESCC----CCBCCSCSHHHHHHHHHH---------TSCEEEEECCSSBCCBTTTTBCEEEEEEEEECTTCC-E
T ss_pred CCeEEEeCCccCCCCCEEEeCCHHHHHHHHhcc---------CCcEEEEecccCceeecCCCceeEEEEEEEEcCCCE-E
Confidence 579999999999999999999999988776531 368999999973 44 4444444432111 1
Q ss_pred EEE----eeec-------------------ccccccee-ee---ee---------------cCCCCCCHHHHHHHHHHHH
Q 041518 258 HLY----ERDC-------------------SVQRRHQK-II---EE---------------APAPNVTHDFRALLGQAAV 295 (765)
Q Consensus 258 ~l~----~r~~-------------------s~~~~~~k-~~---e~---------------~Pa~~l~~~~~~~l~~~a~ 295 (765)
+++ -|-| +++..+.. .. ++ ... .....+.++|.++..
T Consensus 217 y~y~~g~~Rfa~~~y~~~~~~~~~~HLTN~~iqk~~~~~y~~~~~g~~~~~~~f~~yL~~~~~~-~~~~~i~~~I~~ii~ 295 (380)
T 3tig_A 217 YLYREGVLRTSSEPYSDTNFQDMTSHLTNHCIQKEHSKNYGRYEEGNEMFFEEFNQYLVTSLNI-NLENSILCQIKEIIR 295 (380)
T ss_dssp EECSCCEEEECC----------------------------------CCBCHHHHHHHHSTTSSC-CHHHHTHHHHHHHHH
T ss_pred EEEcCCEEEecCCCcCccchhhhhhhccccccccccccccccccCCCcCcHHHHHHHHHHhcCc-cHHHHHHHHHHHHHH
Confidence 110 0111 11111100 00 00 010 112345566666666
Q ss_pred HHHHH----c-----CCC--ceeEEEEEEECCCCcEEEEEecccCCccccccceecCCCHHHHHHHHHcCCCCC
Q 041518 296 SAAKA----V-----SYH--NAGTVEFIVDTVSDQFYFMEMNTRLQVEHPVTEMIVDQDLVEWQIRVANGEPLP 358 (765)
Q Consensus 296 ~i~~a----l-----g~~--G~~~vEf~~~~~~g~~~~iEiN~R~~~~~~~~e~~tGvDl~~~~i~~a~G~~l~ 358 (765)
..+.+ + ++. ....+||++|. +.++++||||..++-...++ -+|++..++++..--.+
T Consensus 296 ~~l~a~~~~i~~~~~~~~~FEl~G~D~lid~-~l~~wllEVN~~P~~~q~~i-----~~l~~~~~~iavdp~f~ 363 (380)
T 3tig_A 296 VCLSCLEPAISTKYLPYHSFQLFGFDFMVDK-NLKVWLIEVNGAPACAQKLY-----AELCKGIVDLAISSVFP 363 (380)
T ss_dssp HHHHHHHHHHCCTTSSSEECEEEEEEEEEBT-TCCEEEEEEESSCCCCTTTH-----HHHHHHHHHHTTTTTSC
T ss_pred HHHHHHHHHhhhcccCCceEEEEeEEEEEcC-CCcEEEEEEeCCCCccHHhH-----HHHHHHHHHHhcccccC
Confidence 65543 2 122 58889999998 89999999999997433221 24788888888765444
No 114
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=97.47 E-value=7.2e-05 Score=71.45 Aligned_cols=66 Identities=20% Similarity=0.346 Sum_probs=59.0
Q ss_pred CcccCCCcceEEEEEcCCCCeecC----CCeEEEEEecceEEEEEcCCCeEEEEE-------------------------
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEE----GQPILVLEAMKMEHVVKAPTTGVVHGL------------------------- 700 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~----G~~l~~~eamKm~~~i~ap~~G~v~~~------------------------- 700 (765)
..|.||++|+|+.+. +..|.|-. |+.++...+. +.++||++|+|..+
T Consensus 13 ~~i~aP~~G~vv~l~-~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidT 88 (161)
T 1f3z_A 13 IEIIAPLSGEIVNIE-DVPDVVFAEKIVGDGIAIKPTG---NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDT 88 (161)
T ss_dssp EEEECSSCEEEEEGG-GSSSHHHHTTSSCEEEEEEECS---SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSG
T ss_pred cEEEecCCeEEEEeE-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccc
Confidence 459999999999986 88998888 8999988874 68999999999999
Q ss_pred ----------EcCCCCccCCCCeEEEEEe
Q 041518 701 ----------QVTAGQQVSDGSVLFRLQA 719 (765)
Q Consensus 701 ----------~~~~G~~v~~g~~l~~i~~ 719 (765)
++++||.|..|++|+++..
T Consensus 89 V~l~G~gF~~~V~~Gd~V~~G~~L~~~d~ 117 (161)
T 1f3z_A 89 VELKGEGFKRIAEEGQRVKVGDTVIEFDL 117 (161)
T ss_dssp GGGTTTTEEECSCTTCEECTTCEEEEECH
T ss_pred hhcCCCccEEEEeCcCEECCCCEEEEECH
Confidence 8999999999999999973
No 115
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=97.43 E-value=6.9e-05 Score=71.13 Aligned_cols=66 Identities=23% Similarity=0.289 Sum_probs=58.7
Q ss_pred CcccCCCcceEEEEEcCCCCeecC----CCeEEEEEecceEEEEEcCCCeEEEE--------------------------
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEE----GQPILVLEAMKMEHVVKAPTTGVVHG-------------------------- 699 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~----G~~l~~~eamKm~~~i~ap~~G~v~~-------------------------- 699 (765)
..|.||++|+|+.+. ++.|.|-+ |+.+++..+. +.++||++|+|..
T Consensus 8 ~~i~aP~~G~vv~l~-~v~D~vf~~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLiHiGidT 83 (154)
T 2gpr_A 8 LKVLAPCDGTIITLD-EVEDEVFKERMLGDGFAINPKS---NDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLDT 83 (154)
T ss_dssp EEEECSSSEEEECGG-GSSCHHHHTTSSCEEEEEEESS---SEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSSG
T ss_pred CEEEecCCeEEEEee-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECcch
Confidence 468999999999985 88999888 8999988874 6999999999998
Q ss_pred ---------EEcCCCCccCCCCeEEEEEe
Q 041518 700 ---------LQVTAGQQVSDGSVLFRLQA 719 (765)
Q Consensus 700 ---------~~~~~G~~v~~g~~l~~i~~ 719 (765)
+++++||.|..|++|+++..
T Consensus 84 v~l~G~gF~~~V~~Gd~V~~G~~L~~~d~ 112 (154)
T 2gpr_A 84 VSLDGNGFESFVTQDQEVNAGDKLVTVDL 112 (154)
T ss_dssp GGGTTCSEEECCCTTCEECTTCEEEEECH
T ss_pred hhcCCCceEEEEcCCCEEcCCCEEEEECH
Confidence 48999999999999999974
No 116
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=97.39 E-value=0.00033 Score=76.04 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=60.2
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEEec----ceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeC
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAM----KMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAV 720 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eam----Km~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~ 720 (765)
.-++||+.| +++..++.||.|++||+|+.++.| +++.+|+||.+|+|.... ....|..|+.|+.|...
T Consensus 268 ~~v~A~~~G-~~~~~~~~g~~V~~G~~La~i~d~~~~g~~~~~v~Ap~dG~v~~~~--~~~~V~~Gd~l~~ia~~ 339 (354)
T 3cdx_A 268 AYVMAPRTG-LFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFGA--GPGRVTRGDAVAVVMED 339 (354)
T ss_dssp GEEECSSCE-EEEESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEEE--CSSEECTTCEEEEEEEE
T ss_pred EEEECCCCE-EEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEcCCCeEEEEEe--CCCccCCCCEEEEEeee
Confidence 457899999 677789999999999999999986 899999999999998664 77789999999998754
No 117
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=97.37 E-value=0.00026 Score=66.59 Aligned_cols=66 Identities=27% Similarity=0.234 Sum_probs=51.0
Q ss_pred CcceEEEEEc-CCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCC---cc---CCC-CeEEEEEeCc
Q 041518 656 MAGLVVKVLA-NDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQ---QV---SDG-SVLFRLQAVH 721 (765)
Q Consensus 656 ~~G~v~~~~v-~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~---~v---~~g-~~l~~i~~~~ 721 (765)
.-|.|+-|.. ++|+.|++|+++++||++|...+|.||.+|+|.+++-+.-+ .| ..| -=|++|...+
T Consensus 57 ~LGdIvfVeLP~vG~~v~~Gd~~~~VESvKa~sdi~sPvsG~VvevN~~L~d~PeliN~dPyg~GWl~kik~~d 130 (155)
T 3hgb_A 57 ALGDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVNSDLDGTPQLVNSDPYGAGWLLDIQVDS 130 (155)
T ss_dssp HHCSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECTHHHHCTTHHHHCTTTTTCCEEEECCT
T ss_pred hcCCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEEhhhhhhChHhhccCCCCCcEEEEEEECC
Confidence 4577877765 79999999999999999999999999999999999743211 12 223 2677777665
No 118
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=97.24 E-value=0.00078 Score=72.39 Aligned_cols=71 Identities=17% Similarity=0.204 Sum_probs=59.7
Q ss_pred CCCCcccCCCcceEEEEEcCCCCeecCCCeEEEEEec----ceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeC
Q 041518 647 GPPGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAM----KMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAV 720 (765)
Q Consensus 647 ~~~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eam----Km~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~ 720 (765)
....-|+||..|. +...|+.||.|++||+|+.|..+ +...+|+||.+|+|.... ..-.|..|+.|+.|...
T Consensus 255 ~~~~~v~A~~~Gl-~~~~v~~Gd~V~~G~~la~I~dp~~~g~~~~~v~Ap~dGiVi~~~--~~~~V~~G~~l~~Ia~~ 329 (331)
T 3na6_A 255 DGDCYLFSEHDGL-FEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRH--FPGMIKSGDCAAVIGVV 329 (331)
T ss_dssp CSCCCEECSSCEE-EEESSCTTCEECTTCEEEEEECSSCSSCCCEEEECSSSEEEEEEE--CSSEECTTCEEEEEECB
T ss_pred CCcEEEeCCCCeE-EEEcCCCCCEEcCCCEEEEEEcCccCCCeeEEEEcCCCEEEEEEe--CCCccCCCCEEEEEecc
Confidence 3445689999994 45689999999999999999986 567999999999998765 44678999999999754
No 119
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=96.85 E-value=0.0011 Score=73.38 Aligned_cols=110 Identities=9% Similarity=0.060 Sum_probs=78.5
Q ss_pred HHHHHHHHHHCCC---C-CCC--ccccC-CCCHHHHHHHHHHhC-CcEEEeecCCCCC----ccEEEECChhHHHHHHHH
Q 041518 151 KSASKRIMGAAGV---P-LVP--GYHGN-EQDIDLMKSEAAKIG-YPILIKPTHGGGG----KGMRIVQSPNDFVDSFLG 218 (765)
Q Consensus 151 K~~~r~~l~~~Gv---p-vp~--~~~~~-~~s~~e~~~~~~~ig-~PvVVKP~~g~Gg----~Gv~~v~s~~el~~a~~~ 218 (765)
-+..|+++.++++ | +.+ +.... ..+.+++.+.++.+| ||+|+|+..-.|| -||++..|.+|+.+++.+
T Consensus 8 Ey~~K~ll~~~~~~~~~~~~~~~~~~~~~~~~~~eA~~~a~~lg~~pvVvKaqv~~ggRgk~GGV~l~~s~eev~~aa~~ 87 (425)
T 3mwd_A 8 EQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKP 87 (425)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCGGGGTSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHHTT
T ss_pred HHHHHHHHHHhccccCCccCCcceEEeCCCCCHHHHHHHHHHhCCCCEEEEeccccCCCCcCCeEEEECCHHHHHHHHHH
Confidence 3678899999999 4 222 32222 246789888899999 9999999764332 379999999999988877
Q ss_pred HHHHHHhcCC----CCcEEEecccCC--CeeEEEEEEEeccccEEEEE
Q 041518 219 AQREAAASFG----INTILLEKYITQ--PRHIEVQIFGDKYGKVLHLY 260 (765)
Q Consensus 219 ~~~ea~~~fg----~~~vlVEeyI~g--grei~v~v~~d~~g~vv~l~ 260 (765)
.......... -..++||++++. ++|+-+.+..|..|.++.++
T Consensus 88 ml~~~~~~~~~~~~v~~vlVe~~~~~~~~~E~ylgi~~Dr~gpvI~~s 135 (425)
T 3mwd_A 88 RLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (425)
T ss_dssp TTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHhhhhhccCCCceEEEEEEEecccCCCCceEEEEEEecCCCCEEEEE
Confidence 6532110000 146999999974 48999999999887766653
No 120
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=96.74 E-value=0.0029 Score=68.88 Aligned_cols=69 Identities=23% Similarity=0.310 Sum_probs=58.8
Q ss_pred CCcccCCCcceEEEEEcCCCCeecCCCeEEEEEe------cceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeC
Q 041518 649 PGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEA------MKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAV 720 (765)
Q Consensus 649 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~ea------mKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~ 720 (765)
..-|+||.+|.+. ..|+.||.|++||+|+.|.. -....+|+||.+|+|.... ..-.|..|+.|+.|...
T Consensus 290 ~~~v~A~~~Gl~~-~~v~lGd~V~kG~~la~I~d~~~~g~g~~~~~v~Ap~dGiVi~~~--~~p~V~~G~~l~~i~~~ 364 (368)
T 3fmc_A 290 YRKFHAPKAGMVE-YLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPILHF--ASASVHQGTELYKVMTK 364 (368)
T ss_dssp EEEEECSSCEEEE-ECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEEEEEC--SSSEECTTCEEEEEEES
T ss_pred cEEEecCCCEEEE-EeCCCCCEeCCCCEEEEEEcCCCCCCCCeeEEEEcCCCEEEEEEe--CCCccCCCCEEEEEeee
Confidence 3458999999665 88999999999999999998 4577999999999997654 55689999999998764
No 121
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.70 E-value=0.00076 Score=59.29 Aligned_cols=48 Identities=21% Similarity=0.351 Sum_probs=43.7
Q ss_pred CCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 674 GQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 674 G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
|..++.+|.|+....|.||.+|+|.++++++||.|++|++|++++...
T Consensus 5 ~g~~~~~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k 52 (100)
T 2dn8_A 5 SSGTCVFEKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMK 52 (100)
T ss_dssp CCCCCCCCCCCCTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEETT
T ss_pred CCEEEEEEcCCCCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEEecc
Confidence 455688899999999999999999999999999999999999999654
No 122
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=96.54 E-value=0.0024 Score=75.90 Aligned_cols=110 Identities=9% Similarity=0.076 Sum_probs=80.1
Q ss_pred HHHHHHHHHHCCCC------CCCccccC-CCCHHHHHHHHHHhC-CcEEEeecCCCCCc----cEEEECChhHHHHHHHH
Q 041518 151 KSASKRIMGAAGVP------LVPGYHGN-EQDIDLMKSEAAKIG-YPILIKPTHGGGGK----GMRIVQSPNDFVDSFLG 218 (765)
Q Consensus 151 K~~~r~~l~~~Gvp------vp~~~~~~-~~s~~e~~~~~~~ig-~PvVVKP~~g~Gg~----Gv~~v~s~~el~~a~~~ 218 (765)
-+..|+++.++++| .+++.... .++.+++.+.++++| +|+|+|+..-.||| ||++..|.+|+.+++.+
T Consensus 8 Ey~aK~ll~~~~~~~~~~~~~~~~~~v~~~~~~~eA~~aa~~lg~~pvVvKaQv~~GgRGKaGGVkL~~s~eEa~~aa~~ 87 (829)
T 3pff_A 8 EQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKP 87 (829)
T ss_dssp HHHHHHHHHHHCCCSSCBCSTTCCEEECTTCCHHHHHHHCTHHHHSCEEEEECSSCSCTTTTTCCEEEECHHHHHHHHTT
T ss_pred HHHHHHHHHHhCccccccccCCceEEeCCCCCHHHHHHHHHHhCCCCEEEEecccccCCCcCCeEEEECCHHHHHHHHHH
Confidence 46789999999998 33443332 235678888888888 99999997766554 79999999999998877
Q ss_pred HHHHHHhcCC----CCcEEEecccCC--CeeEEEEEEEeccccEEEEE
Q 041518 219 AQREAAASFG----INTILLEKYITQ--PRHIEVQIFGDKYGKVLHLY 260 (765)
Q Consensus 219 ~~~ea~~~fg----~~~vlVEeyI~g--grei~v~v~~d~~g~vv~l~ 260 (765)
.......... -..++||++++. ++|+-+.+..|..|.++.+.
T Consensus 88 iLg~~~~~~~p~~~V~gvLVE~m~~~~~~~ElYvgI~~Dr~gpvIm~s 135 (829)
T 3pff_A 88 RLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFH 135 (829)
T ss_dssp TTTCEEEETTEEEECCCEEEEECCCCCGGGEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhcCCCceEEEEEEEecccCCCccEEEEEEEecCCCCEEEEE
Confidence 6532211000 146999999974 48999999999887766654
No 123
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=95.90 E-value=0.0097 Score=48.38 Aligned_cols=38 Identities=21% Similarity=0.422 Sum_probs=33.3
Q ss_pred EEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCcceee
Q 041518 688 VVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVHIQLA 725 (765)
Q Consensus 688 ~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~~~~~ 725 (765)
+|+||.+|+|.++++++||.|.+|++|++|+.......
T Consensus 1 ~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~ 38 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESMKMEIP 38 (72)
T ss_dssp CEECCSSEEEEEECCCTTCEECTTCEEEEEEETTEEEE
T ss_pred CEECcccEEEEEEEcCCcCEECCCCEEEEEECCccEEE
Confidence 37899999999999999999999999999998654333
No 124
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=95.87 E-value=0.0066 Score=50.28 Aligned_cols=33 Identities=30% Similarity=0.553 Sum_probs=30.8
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEEe
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEA 682 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~ea 682 (765)
..|+||..|+|.++++++||.|..|++|+.|+.
T Consensus 45 ~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (77)
T 2l5t_A 45 VKIPSPVRGKIVKILYREGQVVPVGSTLLQIDT 77 (77)
T ss_dssp EECCCCCCEEEEEECCCTTCEECSCSEEEEEEC
T ss_pred EEEECCCCEEEEEEEeCCcCEECCCCEEEEEEC
Confidence 569999999999999999999999999999863
No 125
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=95.79 E-value=0.0057 Score=51.11 Aligned_cols=32 Identities=28% Similarity=0.512 Sum_probs=29.9
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEE
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLE 681 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~e 681 (765)
..|+||..|+|.++++++|+.|..||+|+.|+
T Consensus 49 ~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 49 NQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp EEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred EEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 45899999999999999999999999999885
No 126
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=95.74 E-value=0.015 Score=47.35 Aligned_cols=38 Identities=34% Similarity=0.482 Sum_probs=33.8
Q ss_pred EEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCccee
Q 041518 687 HVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVHIQL 724 (765)
Q Consensus 687 ~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~~~~ 724 (765)
..|.||.+|+|.++++++||.|.+|++|++++......
T Consensus 6 ~~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~ 43 (74)
T 2d5d_A 6 NVVSAPMPGKVLRVLVRVGDRVRVGQGLLVLEAMKMEN 43 (74)
T ss_dssp CEEECSSCEEEEEECCCTTCEECTTCEEEEEEETTEEE
T ss_pred eEEecCCCEEEEEEEcCCCCEeCCCCEEEEEecccceE
Confidence 46899999999999999999999999999999765433
No 127
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.62 E-value=0.033 Score=49.01 Aligned_cols=94 Identities=13% Similarity=0.112 Sum_probs=60.4
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCC-CeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLG-IRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~G-i~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
|+++|+|+|.|.++..+++.+.+.| ++++++..++.........--..+.. ++.+.+.+.+.+ .++|.|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-------d~~~~~~~~~~~--~~~d~vi 74 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQV-------DAKDEAGLAKAL--GGFDAVI 74 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEEC-------CTTCHHHHHHHT--TTCSEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEe-------cCCCHHHHHHHH--cCCCEEE
Confidence 5679999999999999999999999 88777654432211100011122222 345666666665 3789998
Q ss_pred eCCCcccccHHHHHHHHHCCCcEEC
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFIG 139 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~G 139 (765)
...+... ...+...+.+.|..++-
T Consensus 75 ~~~~~~~-~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 75 SAAPFFL-TPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp ECSCGGG-HHHHHHHHHHTTCEEEC
T ss_pred ECCCchh-hHHHHHHHHHhCCCEEE
Confidence 7754332 35667777888887763
No 128
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=95.55 E-value=0.0065 Score=51.43 Aligned_cols=35 Identities=23% Similarity=0.500 Sum_probs=32.2
Q ss_pred EEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCcc
Q 041518 688 VVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVHI 722 (765)
Q Consensus 688 ~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~~ 722 (765)
.|.||.+|+|.++++++||.|.+|++|+.|+....
T Consensus 7 ~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~ 41 (84)
T 2kcc_A 7 VLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKM 41 (84)
T ss_dssp EECCSSSCCEEEESSCTTEEECTTCEEEEEECSSC
T ss_pred eEECCCCEEEEEEECCCCCEECCCCEEEEEEecce
Confidence 49999999999999999999999999999996543
No 129
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=95.42 E-value=0.022 Score=46.97 Aligned_cols=37 Identities=27% Similarity=0.503 Sum_probs=33.4
Q ss_pred EEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCcce
Q 041518 687 HVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVHIQ 723 (765)
Q Consensus 687 ~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~~~ 723 (765)
..|.||.+|+|.++++++|+.|.+|++|+.|+.....
T Consensus 9 ~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~ 45 (77)
T 1dcz_A 9 GEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAMKME 45 (77)
T ss_dssp SEEEBSSSCEEEEECCCTTCEECTTSEEEEEEETTEE
T ss_pred eEEECCCCEEEEEEEcCCcCEEcCCCEEEEEEcccee
Confidence 5689999999999999999999999999999976543
No 130
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=95.41 E-value=0.011 Score=49.25 Aligned_cols=33 Identities=42% Similarity=0.546 Sum_probs=30.9
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEEe
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEA 682 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~ea 682 (765)
..|+||..|+|.++++++|+.|..|++|+.|+.
T Consensus 42 ~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~ 74 (79)
T 1iyu_A 42 MEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEP 74 (79)
T ss_dssp EEEECSSSSEEEEESCCTTCEEETTSEEEEEEC
T ss_pred EEEECCCCEEEEEEEeCCCCEECCCCEEEEEec
Confidence 468999999999999999999999999999875
No 131
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=95.40 E-value=0.0068 Score=50.59 Aligned_cols=34 Identities=35% Similarity=0.562 Sum_probs=31.6
Q ss_pred CCcccCCCcceEEEEEcCCCCeecCCCeEEEEEe
Q 041518 649 PGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEA 682 (765)
Q Consensus 649 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~ea 682 (765)
...|+||..|+|.++++++|+.|..||+|+.|+.
T Consensus 43 ~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~ 76 (80)
T 1qjo_A 43 SMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEV 76 (80)
T ss_dssp CEEEEBSSCEEEEECCCCTTCEECTTCCCEEEES
T ss_pred eEEEeCCCCEEEEEEecCCCCEECCCCEEEEEEc
Confidence 3579999999999999999999999999999974
No 132
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.37 E-value=0.14 Score=54.41 Aligned_cols=95 Identities=11% Similarity=0.020 Sum_probs=63.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-------cccEEEEcCCCCcCcCCCCHHHHHHHHHHh
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-------SADEAIRIGPPPARLSYLNGSSIVDAAIRT 108 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-------~aD~~~~i~~~~~~~syld~~~Il~~a~~~ 108 (765)
+++|||+|+ |.++..+++.+.+.|++++++..+.+....... .--+.+. -++.|.+.+.+++++.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~-------~Dl~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVY-------GLINEQEAMEKILKEH 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEE-------CCTTCHHHHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEE-------eecCCHHHHHHHHhhC
Confidence 468999996 999999999999999999888765422211111 0112222 2467889999999888
Q ss_pred CCCEEEeCCCcc--cccHHHHHHHHHCC-CcEE
Q 041518 109 GAQAIHPGYGFL--SESADFAQLCGDNG-LTFI 138 (765)
Q Consensus 109 ~~DaV~pg~g~l--sE~~~~a~~~~~~G-l~~~ 138 (765)
++|.|+...+.. .-...+.+++.+.| +..+
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 999998775541 11145567777777 6543
No 133
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=95.35 E-value=0.036 Score=59.37 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=56.4
Q ss_pred cccCCCcceEEEEEcCCCCeecCCCeEEEEEe----cceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeC
Q 041518 651 SVLSPMAGLVVKVLANDGTKVEEGQPILVLEA----MKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAV 720 (765)
Q Consensus 651 ~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~ea----mKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~ 720 (765)
.++||..|.+. ..++.|+.|++||+|+.+-. .+...+|+||.+|+|.-.. ..-.|..|+.|+.|...
T Consensus 259 ~~~a~~~G~~~-~~~~~g~~V~~G~~la~i~dp~~~G~~~~~v~Ap~dGiv~~~~--~~p~V~~Gd~l~~ia~~ 329 (332)
T 2qj8_A 259 QLKSPSPGIFE-PRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAIR--SAMYVQGNEEVAILARP 329 (332)
T ss_dssp EEECSSSEEEE-ECSCTTCEECTTCEEEEEECTTCSSSCCEEEECSSSEEEEEEE--CSEEECTTCEEEEEEEE
T ss_pred EEeCCCCeEEE-EeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEeCCCeEEEEEe--CCCeeCCCCEEEEEeeE
Confidence 47899999665 77999999999999999965 5688999999999997654 56678999999988643
No 134
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=95.06 E-value=0.014 Score=48.65 Aligned_cols=33 Identities=24% Similarity=0.421 Sum_probs=30.6
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEEe
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEA 682 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~ea 682 (765)
..|+||..|+|.++++++||.|..||+|+.|+.
T Consensus 45 ~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 45 MEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp EEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred EEEEcCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 568999999999999999999999999999864
No 135
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=95.03 E-value=0.019 Score=51.52 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=32.2
Q ss_pred EEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeC
Q 041518 687 HVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAV 720 (765)
Q Consensus 687 ~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~ 720 (765)
..|.|+.+|+|.++++++||.|.+|++|++|+..
T Consensus 2 ~~v~a~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~ 35 (116)
T 2k32_A 2 VIIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQD 35 (116)
T ss_dssp EEECCSSCEEEEEECSCTTSEECTTCEEEEEECT
T ss_pred eEEeCcCCEEEEEEECCCcCEECCCCEEEEECHH
Confidence 5789999999999999999999999999999976
No 136
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=94.91 E-value=0.011 Score=50.15 Aligned_cols=35 Identities=34% Similarity=0.527 Sum_probs=32.3
Q ss_pred CCcccCCCcceEEEEEcCCCCeecCCCeEEEEEec
Q 041518 649 PGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAM 683 (765)
Q Consensus 649 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eam 683 (765)
...|+||..|+|.++++++|+.|..|++|+.|+..
T Consensus 39 ~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~~ 73 (85)
T 2k7v_A 39 SMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVE 73 (85)
T ss_dssp EEEEECSSCBCCCEECSCTTCCBCTTSEEEEEECC
T ss_pred EEEEECCCCEEEEEEEeCCCCEECCCCEEEEEEcC
Confidence 45799999999999999999999999999999864
No 137
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.84 E-value=0.05 Score=50.25 Aligned_cols=78 Identities=14% Similarity=0.029 Sum_probs=48.9
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 34 QQRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 34 ~~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
..+.++|+|+|.|.++..+++.+++.|+++++++.+++........--..+. +. ..+.+ +++.+.-.++|++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~-gd------~~~~~-~l~~a~i~~ad~v 75 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVL-GN------AANEE-IMQLAHLECAKWL 75 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-SC------TTSHH-HHHHTTGGGCSEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEE-CC------CCCHH-HHHhcCcccCCEE
Confidence 3466899999999999999999999999999988765432111111112222 21 23333 3333333568888
Q ss_pred EeCCCc
Q 041518 114 HPGYGF 119 (765)
Q Consensus 114 ~pg~g~ 119 (765)
+...+.
T Consensus 76 i~~~~~ 81 (140)
T 3fwz_A 76 ILTIPN 81 (140)
T ss_dssp EECCSC
T ss_pred EEECCC
Confidence 866543
No 138
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=94.81 E-value=0.022 Score=49.15 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=31.0
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEEe
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEA 682 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~ea 682 (765)
..|+||..|+|.++++++|+.|..||+|+.|+.
T Consensus 48 ~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~ 80 (93)
T 1k8m_A 48 VTITSRYDGVIKKLYYNLDDIAYVGKPLVDIET 80 (93)
T ss_dssp EECCCSSCEEEEEECCCSSCEECTTSEEEEEEC
T ss_pred EEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEec
Confidence 568999999999999999999999999999974
No 139
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.73 E-value=0.023 Score=52.27 Aligned_cols=91 Identities=10% Similarity=-0.023 Sum_probs=52.4
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
+|++|+|+|.|.++..+++.+.+.|+++++++.+++........--..+..+ ..+.+.+.+ +.-.++|+|+.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd-------~~~~~~l~~-~~~~~~d~vi~ 76 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIAD-------PTDESFYRS-LDLEGVSAVLI 76 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECC-------TTCHHHHHH-SCCTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECC-------CCCHHHHHh-CCcccCCEEEE
Confidence 3679999999999999999999999999988765432111111111222222 244443332 22246788887
Q ss_pred CCCcccccHHHHHHHHHCC
Q 041518 116 GYGFLSESADFAQLCGDNG 134 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~G 134 (765)
..+....+......+.+.+
T Consensus 77 ~~~~~~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 77 TGSDDEFNLKILKALRSVS 95 (141)
T ss_dssp CCSCHHHHHHHHHHHHHHC
T ss_pred ecCCHHHHHHHHHHHHHhC
Confidence 7653333333344444443
No 140
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=94.64 E-value=0.027 Score=53.29 Aligned_cols=65 Identities=15% Similarity=0.299 Sum_probs=42.6
Q ss_pred CcccCCCcceEEE-----------------------------------EEcCCCCeecCCCeEEEEEecc---------e
Q 041518 650 GSVLSPMAGLVVK-----------------------------------VLANDGTKVEEGQPILVLEAMK---------M 685 (765)
Q Consensus 650 ~~v~ap~~G~v~~-----------------------------------~~v~~Gd~V~~G~~l~~~eamK---------m 685 (765)
..++||..|+|.. ++|++||+|++||+|+.+.-.+ .
T Consensus 45 ~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLiHiGidTv~l~G~gF~~~V~~Gd~V~~G~~L~~~d~~~i~~~g~~~~t 124 (154)
T 2gpr_A 45 NDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLDTVSLDGNGFESFVTQDQEVNAGDKLVTVDLKSVAKKVPSIKS 124 (154)
T ss_dssp SEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSSGGGGTTCSEEECCCTTCEECTTCEEEEECHHHHHHHSSCCCE
T ss_pred CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECcchhhcCCCceEEEEcCCCEEcCCCEEEEECHHHHHhcCCCCeE
Confidence 5788999998887 5899999999999999987321 1
Q ss_pred EEEEEcCCCeEEEEEEcCCCCccCCCCeEEEE
Q 041518 686 EHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRL 717 (765)
Q Consensus 686 ~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i 717 (765)
-.-+.- .+ ...+....+..|..|+.|+.+
T Consensus 125 ~vvvtn-~~--~~~~~~~~~~~v~~g~~~~~~ 153 (154)
T 2gpr_A 125 PIIFTN-NG--GKTLEIVKMGEVKQGDVVAIL 153 (154)
T ss_dssp EEEEEE-CS--SCCCSCBCCEEECTTCEEEEE
T ss_pred EEEEEC-CC--cceEEEccCceEcCCCEEEEe
Confidence 122222 11 112223345567788887765
No 141
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=94.30 E-value=0.039 Score=53.20 Aligned_cols=67 Identities=19% Similarity=0.378 Sum_probs=51.4
Q ss_pred CCcccCCCcceEEEEEcCCCCeecC----CCeEEEEEecceEEEEEcCCCeEEEEE------------------------
Q 041518 649 PGSVLSPMAGLVVKVLANDGTKVEE----GQPILVLEAMKMEHVVKAPTTGVVHGL------------------------ 700 (765)
Q Consensus 649 ~~~v~ap~~G~v~~~~v~~Gd~V~~----G~~l~~~eamKm~~~i~ap~~G~v~~~------------------------ 700 (765)
...|.||+.|+++.+ -++-|.|-+ |+-+++.=+ +..|.||++|+|..+
T Consensus 34 ~~~i~aPv~G~vi~L-~eV~D~vFs~~~mGdG~AI~P~---~g~v~AP~dG~V~~vfpT~HAigi~s~~G~EvLIHIGiD 109 (183)
T 3our_B 34 AIEIIAPLSGEIVNI-EDVPDVVFAEKIVGDGIAIKPT---GNKMVAPVNGTIGKIFETNHAFSIESDDGVELFVHFGID 109 (183)
T ss_dssp CEEEECSSCEEEEEG-GGSSCHHHHTTSSCEEEEEEEC---SSEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBS
T ss_pred ceEEEeecceEEEEc-hhCcChHhcccCccCeEEEEcC---CCEEEeCCCeEEEEECCCCCEEEEEeCCCCEEEEEeccc
Confidence 346899999999866 455666644 777777643 347889999998876
Q ss_pred -----------EcCCCCccCCCCeEEEEEe
Q 041518 701 -----------QVTAGQQVSDGSVLFRLQA 719 (765)
Q Consensus 701 -----------~~~~G~~v~~g~~l~~i~~ 719 (765)
+|++||.|.+|++|+++..
T Consensus 110 TV~L~G~gF~~~V~~Gd~Vk~Gd~L~~fD~ 139 (183)
T 3our_B 110 TVELKGEGFTRIAEEGQTVKAGDTVIEFDL 139 (183)
T ss_dssp GGGGTTTTEEECSCTTCEECTTCEEEEECH
T ss_pred ccccCCccceEEEeCcCEEcCCCEEEEECH
Confidence 4558999999999999974
No 142
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=94.29 E-value=0.028 Score=47.77 Aligned_cols=33 Identities=24% Similarity=0.404 Sum_probs=30.8
Q ss_pred CcccCCCcceEEEEEcCCCC-eecCCCeEEEEEe
Q 041518 650 GSVLSPMAGLVVKVLANDGT-KVEEGQPILVLEA 682 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd-~V~~G~~l~~~ea 682 (765)
..|+||..|+|.++++++|+ .|..||+|+.|+.
T Consensus 49 ~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~ 82 (87)
T 3crk_C 49 IGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVE 82 (87)
T ss_dssp EEEECCSCEEEEEESSCTTCCCEETTCEEEEEES
T ss_pred ceeecCcCcEEEEEEECCCCeEECCCCEEEEEEc
Confidence 56899999999999999999 8999999999974
No 143
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.13 E-value=0.41 Score=47.16 Aligned_cols=92 Identities=15% Similarity=0.114 Sum_probs=57.6
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHH-HCCCeEEEEecCCC-CCCccc-cccc-EEEEcCCCCcCcCCCCHHHHHHHHHHhC
Q 041518 35 QRIEKILIAN-RGEIAYRIMRTAK-RLGIRTVAVYSDAD-RDSLHV-KSAD-EAIRIGPPPARLSYLNGSSIVDAAIRTG 109 (765)
Q Consensus 35 ~~~kkILI~g-~G~~a~~iiraar-~~Gi~vvav~s~~d-~~~~~~-~~aD-~~~~i~~~~~~~syld~~~Il~~a~~~~ 109 (765)
+|||+|||+| .|.++..+++.+. +.|++++++..+++ ...... .... ..+.. +..|.+.+.++++ +
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~~~~~~~--~ 73 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEG-------SFQNPGXLEQAVT--N 73 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEEC-------CTTCHHHHHHHHT--T
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEEC-------CCCCHHHHHHHHc--C
Confidence 4678899999 5899999999999 89999988865543 211100 0011 12222 4567777777774 7
Q ss_pred CCEEEeCCCccc-ccHHHHHHHHHCCC
Q 041518 110 AQAIHPGYGFLS-ESADFAQLCGDNGL 135 (765)
Q Consensus 110 ~DaV~pg~g~ls-E~~~~a~~~~~~Gl 135 (765)
+|.|+-.-+... +...+...+.+.|.
T Consensus 74 ~d~vv~~ag~~n~~~~~~~~~~~~~~~ 100 (221)
T 3r6d_A 74 AEVVFVGAMESGSDMASIVKALSRXNI 100 (221)
T ss_dssp CSEEEESCCCCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCCCChhHHHHHHHHHhcCC
Confidence 899986654310 12344556666664
No 144
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.13 E-value=0.2 Score=50.25 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=49.0
Q ss_pred CCcCCCCEEEEEc-CcHHHHHHHHHHHHCC-CeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhC
Q 041518 32 DKQQRIEKILIAN-RGEIAYRIMRTAKRLG-IRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTG 109 (765)
Q Consensus 32 ~~~~~~kkILI~g-~G~~a~~iiraar~~G-i~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~ 109 (765)
...+|||+|||+| .|.++..+++.+.+.| ++++++..+++........--..+.. +..|.+.+.++++ +
T Consensus 18 ~~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~--~ 88 (236)
T 3qvo_A 18 YFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMG-------DVLNHAALKQAMQ--G 88 (236)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEEC-------CTTCHHHHHHHHT--T
T ss_pred eecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEe-------cCCCHHHHHHHhc--C
Confidence 3345689999999 6899999999999999 88888765543321111101112222 4567777777774 6
Q ss_pred CCEEEeCC
Q 041518 110 AQAIHPGY 117 (765)
Q Consensus 110 ~DaV~pg~ 117 (765)
+|+|+-..
T Consensus 89 ~D~vv~~a 96 (236)
T 3qvo_A 89 QDIVYANL 96 (236)
T ss_dssp CSEEEEEC
T ss_pred CCEEEEcC
Confidence 89888543
No 145
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=93.85 E-value=0.028 Score=53.65 Aligned_cols=18 Identities=33% Similarity=0.733 Sum_probs=17.2
Q ss_pred EcCCCCeecCCCeEEEEE
Q 041518 664 LANDGTKVEEGQPILVLE 681 (765)
Q Consensus 664 ~v~~Gd~V~~G~~l~~~e 681 (765)
+|++||+|++||+|+.+.
T Consensus 99 ~V~~Gd~V~~G~~L~~~d 116 (162)
T 1ax3_A 99 FVSEGDRVEPGQKLLEVD 116 (162)
T ss_dssp SCCCCSEECSEEEEEEEC
T ss_pred EEeCCCEEcCCCEEEEEC
Confidence 999999999999999987
No 146
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=93.81 E-value=0.074 Score=50.59 Aligned_cols=32 Identities=22% Similarity=0.650 Sum_probs=29.5
Q ss_pred CcccCCCcceEEEE-----------------------------------EcCCCCeecCCCeEEEEE
Q 041518 650 GSVLSPMAGLVVKV-----------------------------------LANDGTKVEEGQPILVLE 681 (765)
Q Consensus 650 ~~v~ap~~G~v~~~-----------------------------------~v~~Gd~V~~G~~l~~~e 681 (765)
..++||..|+|..+ +|++||+|++||+|+.+.
T Consensus 50 ~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidTV~l~G~gF~~~V~~Gd~V~~G~~L~~~d 116 (161)
T 1f3z_A 50 NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFD 116 (161)
T ss_dssp SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTTTEEECSCTTCEECTTCEEEEEC
T ss_pred CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccchhcCCCccEEEEeCcCEECCCCEEEEEC
Confidence 57899999999988 899999999999999987
No 147
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=93.80 E-value=0.11 Score=61.14 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=30.3
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEE
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLE 681 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~e 681 (765)
..|+||..|+|.+++|++||.|+.||+|++||
T Consensus 650 ~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~ 681 (681)
T 3n6r_A 650 NILRAEKKGVVAKINASAGNSLAVDDVIMEFE 681 (681)
T ss_dssp EEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred eEEECCCCeEEEEEEeCCcCEeCCCCEEEEEC
Confidence 46999999999999999999999999999986
No 148
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=93.70 E-value=0.05 Score=47.43 Aligned_cols=37 Identities=30% Similarity=0.443 Sum_probs=33.1
Q ss_pred EEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCcc
Q 041518 686 EHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVHI 722 (765)
Q Consensus 686 ~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~~ 722 (765)
+..|.||.+|+|.++++++||.|.+|++|++|+....
T Consensus 14 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~ 50 (99)
T 2ejm_A 14 QGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKM 50 (99)
T ss_dssp CSSCBCSSSEEEEEECCCTTEEECSSCEEEEEESSSS
T ss_pred ceEEecCCCEEEEEEECCCCCEECCCCEEEEEEccce
Confidence 3468899999999999999999999999999997654
No 149
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.69 E-value=0.72 Score=44.36 Aligned_cols=72 Identities=17% Similarity=0.200 Sum_probs=47.3
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 38 EKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 38 kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
++|||+|+ |.++..+++.+.+.|++++++..++.........--+.+.. +..|.+.+.++.+ ++|.|+-.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~--~~d~vi~~ 74 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVG-------DVLQAADVDKTVA--GQDAVIVL 74 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEES-------CTTSHHHHHHHHT--TCSEEEEC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEe-------cCCCHHHHHHHHc--CCCEEEEC
Confidence 58999995 89999999999999999988875543211100000112222 3467777777764 68988865
Q ss_pred CC
Q 041518 117 YG 118 (765)
Q Consensus 117 ~g 118 (765)
-+
T Consensus 75 a~ 76 (206)
T 1hdo_A 75 LG 76 (206)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 150
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.66 E-value=0.31 Score=45.49 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=31.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDAD 71 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d 71 (765)
..++|+|+|.|.++..+++.+++.|++++++..++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 457999999999999999999999999888875543
No 151
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=93.54 E-value=0.36 Score=44.16 Aligned_cols=95 Identities=12% Similarity=0.099 Sum_probs=62.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
.++++|+|.|..+..+++.+++. ||+++++..+ ++...........+ + - .+.+.+++++.++|.|+.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~-~~~~~g~~i~g~pV-~---------g-~~~l~~~~~~~~id~vii 71 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD-DRKKHKTTMQGITI-Y---------R-PKYLERLIKKHCISTVLL 71 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS-CGGGTTCEETTEEE-E---------C-GGGHHHHHHHHTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC-CcccCCCEecCeEE-E---------C-HHHHHHHHHHCCCCEEEE
Confidence 46999999999999999999875 8998887643 33211122222222 1 1 356788888999998887
Q ss_pred CCCcccc--cHHHHHHHHHCCCcEE-CCcHH
Q 041518 116 GYGFLSE--SADFAQLCGDNGLTFI-GPPVS 143 (765)
Q Consensus 116 g~g~lsE--~~~~a~~~~~~Gl~~~-Gp~~e 143 (765)
..+.... ...+...|.+.|+.+. -|+..
T Consensus 72 a~~~~~~~~~~~i~~~l~~~gv~v~~vP~~~ 102 (141)
T 3nkl_A 72 AVPSASQVQKKVIIESLAKLHVEVLTIPNLD 102 (141)
T ss_dssp CCTTSCHHHHHHHHHHHHTTTCEEEECCCHH
T ss_pred eCCCCCHHHHHHHHHHHHHcCCeEEECCCHH
Confidence 6543221 1456677888998864 34443
No 152
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=93.50 E-value=0.032 Score=48.18 Aligned_cols=35 Identities=29% Similarity=0.592 Sum_probs=31.1
Q ss_pred EEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 687 HVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 687 ~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
..|.||.+|+|.++.+++||.|.+|++|++|+...
T Consensus 26 ~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k 60 (94)
T 2jku_A 26 SVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMK 60 (94)
T ss_dssp CCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC--
T ss_pred eEEECCCCEEEEEEECCCCCEEcCCCEEEEEeccc
Confidence 45889999999999999999999999999999654
No 153
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=93.48 E-value=0.016 Score=48.38 Aligned_cols=34 Identities=26% Similarity=0.280 Sum_probs=31.0
Q ss_pred CCcccCCCcceEEEEEcCCCCeecCCCeEEEEEe
Q 041518 649 PGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEA 682 (765)
Q Consensus 649 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~ea 682 (765)
...|+||..|+|.++++++||.|..||+|+.|+.
T Consensus 45 ~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 45 VLEVPASADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred EEEEECCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 4679999999999999999999999999998763
No 154
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.46 E-value=0.42 Score=44.49 Aligned_cols=99 Identities=17% Similarity=0.213 Sum_probs=63.6
Q ss_pred CEEEEEcC----cHHHHHHHHHHHHCCCeEEEEecCC--CCC--Ccc-------cccccEEEEcCCCCcCcCCCCHHHHH
Q 041518 38 EKILIANR----GEIAYRIMRTAKRLGIRTVAVYSDA--DRD--SLH-------VKSADEAIRIGPPPARLSYLNGSSIV 102 (765)
Q Consensus 38 kkILI~g~----G~~a~~iiraar~~Gi~vvav~s~~--d~~--~~~-------~~~aD~~~~i~~~~~~~syld~~~Il 102 (765)
++|.|+|. |.++..+++.+++.|++++.++... ... ... ..-+|-.+..=| ......++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp------~~~v~~v~ 87 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRN------SEAAWGVA 87 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSC------STHHHHHH
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeC------HHHHHHHH
Confidence 68999998 6688999999999999977765443 110 000 011233332111 13345555
Q ss_pred HHHHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHH
Q 041518 103 DAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSA 144 (765)
Q Consensus 103 ~~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~ea 144 (765)
+-+.+.++..|+.-.+.. ...+++.+++.|+.++||+---
T Consensus 88 ~~~~~~g~~~i~i~~~~~--~~~l~~~a~~~Gi~~igpnc~g 127 (145)
T 2duw_A 88 QEAIAIGAKTLWLQLGVI--NEQAAVLAREAGLSVVMDRCPA 127 (145)
T ss_dssp HHHHHHTCCEEECCTTCC--CHHHHHHHHTTTCEEECSCCHH
T ss_pred HHHHHcCCCEEEEcCChH--HHHHHHHHHHcCCEEEcCCeee
Confidence 555567888888665443 4778888999999999876443
No 155
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=93.32 E-value=0.08 Score=46.99 Aligned_cols=42 Identities=12% Similarity=0.320 Sum_probs=34.7
Q ss_pred ecceEEEEEcCC------CeEEEEEEcCCCCccCCCCeEEEEEeCcce
Q 041518 682 AMKMEHVVKAPT------TGVVHGLQVTAGQQVSDGSVLFRLQAVHIQ 723 (765)
Q Consensus 682 amKm~~~i~ap~------~G~v~~~~~~~G~~v~~g~~l~~i~~~~~~ 723 (765)
+|-|..+|+.|. .|+|.++++++||.|..|++|++|+.....
T Consensus 3 ~~p~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~ 50 (108)
T 2dne_A 3 SGSSGQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKAT 50 (108)
T ss_dssp CCCCCEEEECCCCSSSCCEEEEEECSSCTTCEECTTSEEEEEECSSCE
T ss_pred CCccceEEecCCCCCCcccEEEEEEEcCCCCEecCCCEEEEEEcCcce
Confidence 355667777774 789999999999999999999999976543
No 156
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.30 E-value=0.39 Score=50.20 Aligned_cols=121 Identities=15% Similarity=0.185 Sum_probs=74.7
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-cc--c-cEEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KS--A-DEAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~--a-D~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
|+++|||+| .|.++..+++.+.+.|++++++..+........ .+ . -+.+. -++.|.+.+.++++ ++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~-------~Dl~d~~~l~~a~~--~~ 80 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVK-------GELDEHEKLVELMK--KV 80 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEE-------CCTTCHHHHHHHHT--TC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEE-------ecCCCHHHHHHHHc--CC
Confidence 568999999 589999999999999999988876543211100 00 0 12222 24577788877774 68
Q ss_pred CEEEeCCCccc--ccHHHHHHHHHCC-Cc-EE----CCc-------HHHHHHhcCHHHHHHHHHHCCCCC
Q 041518 111 QAIHPGYGFLS--ESADFAQLCGDNG-LT-FI----GPP-------VSAIRDMGDKSASKRIMGAAGVPL 165 (765)
Q Consensus 111 DaV~pg~g~ls--E~~~~a~~~~~~G-l~-~~----Gp~-------~eai~~~~DK~~~r~~l~~~Gvpv 165 (765)
|+|+...+... -...+.+++.+.| +. ++ |.+ .........|....+++++.|++.
T Consensus 81 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 150 (318)
T 2r6j_A 81 DVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPY 150 (318)
T ss_dssp SEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred CEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCe
Confidence 99886654321 1135566777666 54 22 211 011122367888888888888765
No 157
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.27 E-value=0.12 Score=47.04 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=29.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
++++|+|+|.|.++..+++.+.+.|+++++++.+
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999999999999999999998887654
No 158
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.08 E-value=0.044 Score=47.74 Aligned_cols=34 Identities=18% Similarity=0.284 Sum_probs=31.5
Q ss_pred CcccCCCcceEEEEEcCCCCee-cCCCeEEEEEec
Q 041518 650 GSVLSPMAGLVVKVLANDGTKV-EEGQPILVLEAM 683 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V-~~G~~l~~~eam 683 (765)
..|+||..|+|.++++++|+.| ..||+|+.|+..
T Consensus 51 ~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~~~ 85 (98)
T 2dnc_A 51 VTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEE 85 (98)
T ss_dssp EEEECSSCEEEEECSSCTTCCCEESSCEEEEEECT
T ss_pred eEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEecC
Confidence 5689999999999999999998 999999999854
No 159
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=92.95 E-value=0.019 Score=47.96 Aligned_cols=33 Identities=39% Similarity=0.509 Sum_probs=30.7
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEEe
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEA 682 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~ea 682 (765)
..|+||..|+|.++++++|+.|..|++|+.|+.
T Consensus 45 ~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (81)
T 1gjx_A 45 MDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEA 77 (81)
T ss_dssp EEECCCCSSBBCCCCCCSSCEECSSSCCCEECC
T ss_pred EEEECCCCEEEEEEecCCCCEeCCCCEEEEEEe
Confidence 569999999999999999999999999999864
No 160
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=92.85 E-value=0.17 Score=46.27 Aligned_cols=31 Identities=23% Similarity=0.443 Sum_probs=27.5
Q ss_pred CCeEEEEEEcCCCCccCCCCeEEEEEeCcce
Q 041518 693 TTGVVHGLQVTAGQQVSDGSVLFRLQAVHIQ 723 (765)
Q Consensus 693 ~~G~v~~~~~~~G~~v~~g~~l~~i~~~~~~ 723 (765)
..|+|.++++++||.|..|++|++|+.....
T Consensus 40 ~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~ 70 (128)
T 1y8o_B 40 TMGTVQRWEKKVGEKLSEGDLLAEIETDKAT 70 (128)
T ss_dssp SEEEEEEECSCTTCEECTTCEEEEEECSSCE
T ss_pred ccEEEEEEecCCCCEecCCCEEEEEEcCcce
Confidence 4699999999999999999999999976543
No 161
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=92.71 E-value=0.71 Score=47.95 Aligned_cols=88 Identities=11% Similarity=0.132 Sum_probs=54.2
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
|+++|||+| .|.++..+++.+.+.|++++++....... . .. --+.+.. +.. .+.+.++++ ++|+|+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~-~~-~~~~~~~-------Dl~-~~~~~~~~~--~~d~Vi 67 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK-A-IN-DYEYRVS-------DYT-LEDLINQLN--DVDAVV 67 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEEC-------CCC-HHHHHHHTT--TCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc-c-CC-ceEEEEc-------ccc-HHHHHHhhc--CCCEEE
Confidence 568999999 68999999999999999998887652221 1 11 1112221 334 566666664 899988
Q ss_pred eCCCcccc---------c----HHHHHHHHHCCCc
Q 041518 115 PGYGFLSE---------S----ADFAQLCGDNGLT 136 (765)
Q Consensus 115 pg~g~lsE---------~----~~~a~~~~~~Gl~ 136 (765)
-.-+.... | ..+.+++.+.|+.
T Consensus 68 h~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~ 102 (311)
T 3m2p_A 68 HLAATRGSQGKISEFHDNEILTQNLYDACYENNIS 102 (311)
T ss_dssp ECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCC
T ss_pred EccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 65332211 0 2345666777765
No 162
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=92.70 E-value=0.61 Score=43.02 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=62.1
Q ss_pred CEEEEEcC----cHHHHHHHHHHHHCCCeEEEEecCCCCC--Cccc-------ccccEEEEcCCCCcCcCCCCHHHHHHH
Q 041518 38 EKILIANR----GEIAYRIMRTAKRLGIRTVAVYSDADRD--SLHV-------KSADEAIRIGPPPARLSYLNGSSIVDA 104 (765)
Q Consensus 38 kkILI~g~----G~~a~~iiraar~~Gi~vvav~s~~d~~--~~~~-------~~aD~~~~i~~~~~~~syld~~~Il~~ 104 (765)
++|.|+|. |.++..+++.+++.|++++.++...... .... .-+|-.+..=| ......+++-
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp------~~~v~~v~~~ 88 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVP------PKVGLQVAKE 88 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSC------HHHHHHHHHH
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeC------HHHHHHHHHH
Confidence 69999998 8889999999999999977765432210 0000 11233332111 0223344444
Q ss_pred HHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHH
Q 041518 105 AIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSA 144 (765)
Q Consensus 105 a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~ea 144 (765)
+.+.++.+++.-.+. +...+.+.+++.|+.++||+--.
T Consensus 89 ~~~~g~~~i~~~~~~--~~~~l~~~a~~~Gi~~igpnc~g 126 (138)
T 1y81_A 89 AVEAGFKKLWFQPGA--ESEEIRRFLEKAGVEYSFGRCIM 126 (138)
T ss_dssp HHHTTCCEEEECTTS--CCHHHHHHHHHHTCEEECSCCHH
T ss_pred HHHcCCCEEEEcCcc--HHHHHHHHHHHCCCEEEcCCcce
Confidence 455788888766544 34778888889999999876433
No 163
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=92.68 E-value=0.075 Score=56.74 Aligned_cols=59 Identities=19% Similarity=0.250 Sum_probs=44.0
Q ss_pred EEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 662 KVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 662 ~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
-..|+.|+.-..=..-..+++.+ +..|.++.+|+|.++++++||.|++|++|++|++.+
T Consensus 8 ~~~v~~~~~~~~v~~~G~v~~~~-~~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~~~ 66 (341)
T 3fpp_A 8 TLIVRPGDLQQSVLATGKLDALR-KVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQ 66 (341)
T ss_dssp -----CCCCCCEEEEEEEEEESS-EEECCCSSCEEEEEECCCTTCEECTTCEEEEECCHH
T ss_pred EEEEEEeceeEEEEEEEEEEeeE-EEEEeccCCcEEEEEEeCCCCEECCCCEEEEEChHH
Confidence 34455555444444556777764 678999999999999999999999999999998753
No 164
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=92.56 E-value=0.096 Score=50.99 Aligned_cols=48 Identities=27% Similarity=0.413 Sum_probs=38.5
Q ss_pred EEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEE-----------------------------cCCCCccCCCC
Q 041518 662 KVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQ-----------------------------VTAGQQVSDGS 712 (765)
Q Consensus 662 ~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~-----------------------------~~~G~~v~~g~ 712 (765)
.++|++|+.|++||.|+.-. +|.|..+|+|.+.. ++.|+.|.+|+
T Consensus 22 ~L~V~dG~~VkkG~~laeWD------PIitE~~G~V~d~k~lP~I~I~d~~G~~~~~Y~LPvgA~l~~~V~dG~~V~~Gd 95 (193)
T 2xha_A 22 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVDVKNVRKIVVETIDRKYTKTYYIPESAGIEPGLRVGTKVKQGL 95 (193)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEEEEEEEEEEEECTTSSCEEEEEEEGGGCCCTTCCTTCEECTTS
T ss_pred EEEECCCCEEcCCCEEEEeC------cEEEccCEEEEeeccCcEEEEEcCCCCEeEEEEcCCCCEEEEEcCCCCEEcCCC
Confidence 36899999999999999866 77888888775433 66788888888
Q ss_pred eEE
Q 041518 713 VLF 715 (765)
Q Consensus 713 ~l~ 715 (765)
+|+
T Consensus 96 vLA 98 (193)
T 2xha_A 96 PLS 98 (193)
T ss_dssp BSS
T ss_pred EEe
Confidence 777
No 165
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=92.49 E-value=0.088 Score=54.44 Aligned_cols=47 Identities=13% Similarity=0.209 Sum_probs=39.1
Q ss_pred CCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 674 GQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 674 G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
=..-..+++- -...|.++.+|+|.++++++||.|.+|++|++|+..+
T Consensus 11 v~~~G~v~~~-~~~~v~a~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~ 57 (277)
T 2f1m_A 11 TELPGRTSAY-RIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPAT 57 (277)
T ss_dssp CEEEEEEECS-EEEEECCSSCEEEEEECSCTTCEECTTSCSEEECCHH
T ss_pred EEEEEEEEee-eEEEEEccccEEEEEEEcCCCCEecCCCEEEEECcHH
Confidence 3445566664 4578999999999999999999999999999998753
No 166
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=92.38 E-value=0.86 Score=42.25 Aligned_cols=101 Identities=14% Similarity=0.096 Sum_probs=64.0
Q ss_pred CCEEEEEcC----cHHHHHHHHHHHHCCCeEEEEecCCCCC--Cc-ccc------cccEEEEcCCCCcCcCCCCHHHHHH
Q 041518 37 IEKILIANR----GEIAYRIMRTAKRLGIRTVAVYSDADRD--SL-HVK------SADEAIRIGPPPARLSYLNGSSIVD 103 (765)
Q Consensus 37 ~kkILI~g~----G~~a~~iiraar~~Gi~vvav~s~~d~~--~~-~~~------~aD~~~~i~~~~~~~syld~~~Il~ 103 (765)
.++|.|+|. |..+.++++.+++.|++++.++.....- .+ +.. -.|-.+..=| ......+++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~vp------~~~~~~vv~ 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVK------PKLTMEYVE 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSC------HHHHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEeC------HHHHHHHHH
Confidence 369999998 5678899999999999977775432110 00 001 1233332111 022344555
Q ss_pred HHHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHHH
Q 041518 104 AAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAI 145 (765)
Q Consensus 104 ~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai 145 (765)
.+.+.++.+++...|+. ...+.+.+++.|+.++||+--.+
T Consensus 96 ~~~~~gi~~i~~~~g~~--~~~l~~~a~~~Gi~vvGpnc~gv 135 (144)
T 2d59_A 96 QAIKKGAKVVWFQYNTY--NREASKKADEAGLIIVANRCMMR 135 (144)
T ss_dssp HHHHHTCSEEEECTTCC--CHHHHHHHHHTTCEEEESCCHHH
T ss_pred HHHHcCCCEEEECCCch--HHHHHHHHHHcCCEEEcCCchhh
Confidence 56667888888665553 47888899999999998764433
No 167
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=91.63 E-value=0.22 Score=46.89 Aligned_cols=52 Identities=25% Similarity=0.324 Sum_probs=45.6
Q ss_pred ccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEE-EEEcCCCeEEEEEEcC
Q 041518 652 VLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEH-VVKAPTTGVVHGLQVT 703 (765)
Q Consensus 652 v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~-~i~ap~~G~v~~~~~~ 703 (765)
..=|..|..+-+.+.+|++|.+|+.|+-+.+-|-|. -++||++|+|.-+.-.
T Consensus 103 ~lvpaeG~~V~~i~~~G~rV~kgd~lA~i~T~KGEVR~i~spv~G~Vv~v~e~ 155 (169)
T 3d4r_A 103 ISVPAEGYKVYPIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMNEI 155 (169)
T ss_dssp EEEEECSSEEEECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEEEE
T ss_pred EEEEeCceEEEEEcCcCcEeccCCeEEEEEecCceEEEecCCCcEEEEEEEec
Confidence 455788999999999999999999999999999875 5999999999877533
No 168
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=91.48 E-value=0.25 Score=47.60 Aligned_cols=26 Identities=19% Similarity=0.482 Sum_probs=21.4
Q ss_pred CcceEEEEEcCCCCeecCCCeEEEEE
Q 041518 656 MAGLVVKVLANDGTKVEEGQPILVLE 681 (765)
Q Consensus 656 ~~G~v~~~~v~~Gd~V~~G~~l~~~e 681 (765)
+.|.=-+++|++||+|++||+|+.+.
T Consensus 113 L~G~gF~~~V~~Gd~Vk~Gd~L~~fD 138 (183)
T 3our_B 113 LKGEGFTRIAEEGQTVKAGDTVIEFD 138 (183)
T ss_dssp GTTTTEEECSCTTCEECTTCEEEEEC
T ss_pred cCCccceEEEeCcCEEcCCCEEEEEC
Confidence 34444478999999999999999986
No 169
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=91.44 E-value=0.14 Score=60.16 Aligned_cols=34 Identities=35% Similarity=0.640 Sum_probs=0.0
Q ss_pred CCcccCCCcceEEEEEcCCCCeecCCCeEEEEEe
Q 041518 649 PGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEA 682 (765)
Q Consensus 649 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~ea 682 (765)
...|+||..|+|.+++|++||.|..||+|++||.
T Consensus 639 ~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~~ 672 (675)
T 3u9t_A 639 EHSIRAPHAGVVKALYCSEGELVEEGTPLVELDE 672 (675)
T ss_dssp ----------------------------------
T ss_pred eEEEECCCCeEEEEEEeCCcCCcCCCCEEEEEec
Confidence 3569999999999999999999999999999984
No 170
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=91.01 E-value=0.91 Score=41.00 Aligned_cols=98 Identities=14% Similarity=0.071 Sum_probs=64.8
Q ss_pred CCEEEEEcCc----HHHHHHHHHHHHCCCeEEEEecCCCCCC---ccccc-----ccEEEEcCCCCcCcCCCCHHHHHHH
Q 041518 37 IEKILIANRG----EIAYRIMRTAKRLGIRTVAVYSDADRDS---LHVKS-----ADEAIRIGPPPARLSYLNGSSIVDA 104 (765)
Q Consensus 37 ~kkILI~g~G----~~a~~iiraar~~Gi~vvav~s~~d~~~---~~~~~-----aD~~~~i~~~~~~~syld~~~Il~~ 104 (765)
.|+|.|+|.+ ..+.++++.+++.||+++.|+...+.-. .+.++ .|-++..-+ -.....+++-
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~p------~~~v~~~v~e 77 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYIN------PQNQLSEYNY 77 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECSC------HHHHGGGHHH
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEeC------HHHHHHHHHH
Confidence 4799999965 3588999999999999998865432210 01111 343332211 0122345666
Q ss_pred HHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcH
Q 041518 105 AIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPV 142 (765)
Q Consensus 105 a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~ 142 (765)
|.+.++.+|+...|+. +..+.+.+++.|+.++|+..
T Consensus 78 ~~~~g~k~v~~~~G~~--~~e~~~~a~~~Girvv~nC~ 113 (122)
T 3ff4_A 78 ILSLKPKRVIFNPGTE--NEELEEILSENGIEPVIGCT 113 (122)
T ss_dssp HHHHCCSEEEECTTCC--CHHHHHHHHHTTCEEEESCH
T ss_pred HHhcCCCEEEECCCCC--hHHHHHHHHHcCCeEECCcC
Confidence 6678888998877764 57888999999999997443
No 171
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=90.90 E-value=0.71 Score=49.26 Aligned_cols=73 Identities=16% Similarity=0.094 Sum_probs=48.6
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHC-CCeEEEEecCCCCCCccccccc-EEEEcCCCCcCcCCC-CHHHHHHHHHHhCC
Q 041518 35 QRIEKILIAN-RGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSAD-EAIRIGPPPARLSYL-NGSSIVDAAIRTGA 110 (765)
Q Consensus 35 ~~~kkILI~g-~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD-~~~~i~~~~~~~syl-d~~~Il~~a~~~~~ 110 (765)
++|++|||+| .|.++..+++.+.+. |++|+++............... +.+.. +.. +.+.+.++++ ++
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~-------Dl~~d~~~~~~~~~--~~ 92 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEG-------DITINKEWVEYHVK--KC 92 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEEC-------CTTTCHHHHHHHHH--HC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeC-------ccCCCHHHHHHHhc--cC
Confidence 4578999999 589999999999998 9999988765433221111111 12221 345 6777777775 68
Q ss_pred CEEEeC
Q 041518 111 QAIHPG 116 (765)
Q Consensus 111 DaV~pg 116 (765)
|.|+-.
T Consensus 93 d~Vih~ 98 (372)
T 3slg_A 93 DVILPL 98 (372)
T ss_dssp SEEEEC
T ss_pred CEEEEc
Confidence 988854
No 172
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=90.87 E-value=0.11 Score=55.96 Aligned_cols=62 Identities=23% Similarity=0.239 Sum_probs=50.7
Q ss_pred EEEEEcCCCCeecCCCeEEEEEec-ceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 660 VVKVLANDGTKVEEGQPILVLEAM-KMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 660 v~~~~v~~Gd~V~~G~~l~~~eam-Km~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
|.-..|+.|+....=..-..+++. .-+..|.++.+|+|.++++++||.|.+|++|++|+..+
T Consensus 30 v~~~~v~~~~~~~~~~~~G~v~~~p~~~~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~ 92 (359)
T 3lnn_A 30 LAVAPATRETVAAPFNLPAMIEADPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD 92 (359)
T ss_dssp CCEEECEEEEECCEEEEEEEEECCSSSEEEECCSSCEEEEECCSCTTCEECTTCEEEEEECSS
T ss_pred eEEEEeeecccceeEEEEEEEEECCCcEEEEeccCCEEEEEEEcCCCCEEcCCCEEEEEChHH
Confidence 444456666666556667788875 56789999999999999999999999999999999865
No 173
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=90.87 E-value=0.72 Score=42.65 Aligned_cols=101 Identities=12% Similarity=0.125 Sum_probs=63.5
Q ss_pred CCEEEEEcC----cHHHHHHHHHHHHCCCeEEEEecC--CCCC--Cc-cccc------ccEEEEcCCCCcCcCCCCHHHH
Q 041518 37 IEKILIANR----GEIAYRIMRTAKRLGIRTVAVYSD--ADRD--SL-HVKS------ADEAIRIGPPPARLSYLNGSSI 101 (765)
Q Consensus 37 ~kkILI~g~----G~~a~~iiraar~~Gi~vvav~s~--~d~~--~~-~~~~------aD~~~~i~~~~~~~syld~~~I 101 (765)
.++|.|+|. |..+..+++.+++.|++++.++.. .+.- .+ +..+ .|-++..=|. .....+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp~------~~~~~v 86 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPP------SALMDH 86 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCH------HHHTTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeCH------HHHHHH
Confidence 379999997 567889999999999997777654 2110 00 1011 2333322110 112233
Q ss_pred HHHHHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHHH
Q 041518 102 VDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAI 145 (765)
Q Consensus 102 l~~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai 145 (765)
++.+.+.++.+|+...|+. +..+.+.+++.|+.++||+--.+
T Consensus 87 ~~~~~~~gi~~i~~~~g~~--~~~~~~~a~~~Gir~vgpnc~g~ 128 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGIR--HPEFEKALKEAGIPVVADRCLMV 128 (140)
T ss_dssp HHHHHHHCCSCEEECTTCC--CHHHHHHHHHTTCCEEESCCHHH
T ss_pred HHHHHHcCCCEEEEcCCcC--HHHHHHHHHHcCCEEEcCCccce
Confidence 5555567888888766654 47888999999999999764433
No 174
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A*
Probab=90.79 E-value=0.73 Score=53.22 Aligned_cols=99 Identities=13% Similarity=0.181 Sum_probs=65.7
Q ss_pred HHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCC-CC-CCCccccCCCCHHHHHHHHHHhCCcEEEeecCCCCCcc
Q 041518 125 DFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAG-VP-LVPGYHGNEQDIDLMKSEAAKIGYPILIKPTHGGGGKG 202 (765)
Q Consensus 125 ~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~G-vp-vp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~g~Gg~G 202 (765)
.+.+++++.++.++.|....+ +.||..+.-+.+.+- -| .+|++. . .+. ++ ..- ..|+||..|..|.|
T Consensus 474 ~ll~~l~~~~v~iieP~~~~l--lsNKailalLw~l~p~hp~LLpT~f-~-~~~-~l----~~~--~yV~KPi~gReG~n 542 (619)
T 2io8_A 474 RLIDVLLRPEVLVFEPLWTVI--PGNKAILPILWSLFPHHRYLLDTDF-T-VND-EL----VKT--GYAVKPIAGRCGSN 542 (619)
T ss_dssp CHHHHHTCTTCEEESCGGGGT--TTSTTHHHHHHHHSTTCTTCCCEES-S-CCH-HH----HHH--CEEEEETTCCTTTT
T ss_pred HHHHHHHhCCCEEECHHHHHH--hhhHHHHHHHHHhCCCCCCCCCeee-c-CCc-cc----ccC--CEEEccCCCCCCCC
Confidence 467888888899997776655 999999988888651 22 225442 1 232 22 122 59999999999999
Q ss_pred EEEECChhHHHHHHHHHHHHHHhcCCCCcEEEecccCCC
Q 041518 203 MRIVQSPNDFVDSFLGAQREAAASFGINTILLEKYITQP 241 (765)
Q Consensus 203 v~~v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~gg 241 (765)
|.+++..++.. .+....|+...++.|+|++-+
T Consensus 543 V~i~~~~~~~~-------~~~~~~y~~~~~IyQe~~~lp 574 (619)
T 2io8_A 543 IDLVSHHEEVL-------DKTSGKFAEQKNIYQQLWCLP 574 (619)
T ss_dssp CEEECTTSCEE-------EECCCTTTTSCEEEEECCCCC
T ss_pred EEEEeCCChhH-------hhccccccCCCeEEEEecCCC
Confidence 99997622210 011223556789999999843
No 175
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.54 E-value=0.64 Score=45.74 Aligned_cols=71 Identities=14% Similarity=0.249 Sum_probs=48.9
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
|+||||+| .|.++..+++.+.+.|++++++..++...... .+..-.+. -+..|.+.+.++++ ++|+|+-
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~-----~Dl~d~~~~~~~~~--~~d~vi~ 73 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---NEHLKVKK-----ADVSSLDEVCEVCK--GADAVIS 73 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---CTTEEEEC-----CCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---cCceEEEE-----ecCCCHHHHHHHhc--CCCEEEE
Confidence 57999999 58899999999999999998886554332111 11111121 24577788887775 6899886
Q ss_pred CC
Q 041518 116 GY 117 (765)
Q Consensus 116 g~ 117 (765)
..
T Consensus 74 ~a 75 (227)
T 3dhn_A 74 AF 75 (227)
T ss_dssp CC
T ss_pred eC
Confidence 54
No 176
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=90.53 E-value=1.6 Score=45.77 Aligned_cols=92 Identities=12% Similarity=0.053 Sum_probs=62.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHH-----HHhCC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAA-----IRTGA 110 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a-----~~~~~ 110 (765)
|.||.|+|. |.++...++++++.+.+++++.. .+... ...+.. + +...-|.+.+.+++.+ ...++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d-~~~~~--~~~~~~-~-----~~~~~~~~~~~ll~~~~~l~~~~~~v 73 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLD-PATNV--GLVDSF-F-----PEAEFFTEPEAFEAYLEDLRDRGEGV 73 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEEC-SSCCC--GGGGGT-C-----TTCEEESCHHHHHHHHHHHHHTTCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEc-CCHHH--HHHHhh-C-----CCCceeCCHHHHHHHhhhhcccCCCC
Confidence 579999998 67888999999999999988864 33322 112211 1 1123467888888665 45689
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 111 QAIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 111 DaV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
|+|+...-. .-+..++..+.++|..++
T Consensus 74 D~V~I~tP~-~~H~~~~~~al~aGkhVl 100 (312)
T 3o9z_A 74 DYLSIASPN-HLHYPQIRMALRLGANAL 100 (312)
T ss_dssp SEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred cEEEECCCc-hhhHHHHHHHHHCCCeEE
Confidence 999876422 234677788888898877
No 177
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=90.40 E-value=0.97 Score=48.52 Aligned_cols=101 Identities=12% Similarity=0.011 Sum_probs=53.4
Q ss_pred CCCEEEEEcCcH---H--HHHHHHHHHHCCCeEEEEecCCCCCCccccccc-EEEEcCCCCc-----CcCCCC-------
Q 041518 36 RIEKILIANRGE---I--AYRIMRTAKRLGIRTVAVYSDADRDSLHVKSAD-EAIRIGPPPA-----RLSYLN------- 97 (765)
Q Consensus 36 ~~kkILI~g~G~---~--a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD-~~~~i~~~~~-----~~syld------- 97 (765)
|.+||||+++|. + ++.+++.+++.|+++..+.+...........+. ....++.... .+....
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKS 80 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHH
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHH
Confidence 668999998763 2 688999999999998877543211111111111 1222322110 001111
Q ss_pred HHHHHHHHHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 98 GSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 98 ~~~Il~~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
......+.++.++|.|+...++.+ ....-+....|+|++
T Consensus 81 ~~~~~~~l~~~~PDvVi~~g~~~s--~p~~laA~~~~iP~v 119 (365)
T 3s2u_A 81 LFQALRVIRQLRPVCVLGLGGYVT--GPGGLAARLNGVPLV 119 (365)
T ss_dssp HHHHHHHHHHHCCSEEEECSSSTH--HHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhcCCCEEEEcCCcch--HHHHHHHHHcCCCEE
Confidence 123455678899999996655544 222223455788776
No 178
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=90.17 E-value=1.1 Score=46.23 Aligned_cols=122 Identities=21% Similarity=0.248 Sum_probs=72.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcc-c----cc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHhC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLH-V----KS-ADEAIRIGPPPARLSYLNGSSIVDAAIRTG 109 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~-~----~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~~ 109 (765)
|++|||+| .|.++..+++.+.+.|++++++..+.....+. . .+ ......+ .-++.|.+.+.++++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~-----~~D~~d~~~l~~~~~--~ 76 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI-----EASLDDHQRLVDALK--Q 76 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE-----CCCSSCHHHHHHHHT--T
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEE-----eCCCCCHHHHHHHHh--C
Confidence 46899999 58999999999999999988876543321110 0 00 0111111 125677788877774 7
Q ss_pred CCEEEeCCCccc------ccHHHHHHHHHCC-Cc-EE----CCcHH--------HHHHhcCHHHHHHHHHHCCCCC
Q 041518 110 AQAIHPGYGFLS------ESADFAQLCGDNG-LT-FI----GPPVS--------AIRDMGDKSASKRIMGAAGVPL 165 (765)
Q Consensus 110 ~DaV~pg~g~ls------E~~~~a~~~~~~G-l~-~~----Gp~~e--------ai~~~~DK~~~r~~l~~~Gvpv 165 (765)
+|+|+...+... -...+.+++.+.| +. ++ |.+.. .......|....+++++.|++.
T Consensus 77 ~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y~sK~~~e~~~~~~g~~~ 152 (313)
T 1qyd_A 77 VDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPY 152 (313)
T ss_dssp CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCB
T ss_pred CCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchHHHHHHHHHHHHhcCCCe
Confidence 999886644321 1135667777787 54 32 21100 0112256777777777777664
No 179
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=90.12 E-value=0.99 Score=47.13 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=49.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc--EEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSAD--EAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD--~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
|++|||+| .|.++..+++.+.+.|++++++........ ..+.+ +.+.. +..+.+.+.+++++.++|.|
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~d~v 71 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAKFYNG-------DLRDKAFLRDVFTQENIEAV 71 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSEEEEC-------CTTCHHHHHHHHHHSCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcEEEEC-------CCCCHHHHHHHHhhcCCCEE
Confidence 46899998 589999999999999999988764332211 11111 12222 34677788888877789998
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+-.-+
T Consensus 72 ih~a~ 76 (330)
T 2c20_A 72 MHFAA 76 (330)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 86543
No 180
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=90.09 E-value=1.2 Score=46.04 Aligned_cols=93 Identities=17% Similarity=0.217 Sum_probs=57.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCC-Cc-cc----cc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHh
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRD-SL-HV----KS-ADEAIRIGPPPARLSYLNGSSIVDAAIRT 108 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~-~~-~~----~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~ 108 (765)
|++|||+|+ |.++..+++.+.+.|++++++..+.... .+ .. .+ ......+ .-++.|.+.+.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v-----~~D~~d~~~l~~~~~-- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV-----HGSIDDHASLVEAVK-- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEE-----CCCTTCHHHHHHHHH--
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEE-----EeccCCHHHHHHHHc--
Confidence 578999995 8999999999999999988876543221 01 00 00 0011111 125677788877774
Q ss_pred CCCEEEeCCCcc--cccHHHHHHHHHCC-Cc
Q 041518 109 GAQAIHPGYGFL--SESADFAQLCGDNG-LT 136 (765)
Q Consensus 109 ~~DaV~pg~g~l--sE~~~~a~~~~~~G-l~ 136 (765)
++|+|+...+.. .....+.+++.+.| +.
T Consensus 77 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~ 107 (308)
T 1qyc_A 77 NVDVVISTVGSLQIESQVNIIKAIKEVGTVK 107 (308)
T ss_dssp TCSEEEECCCGGGSGGGHHHHHHHHHHCCCS
T ss_pred CCCEEEECCcchhhhhHHHHHHHHHhcCCCc
Confidence 689988765432 11245667777776 54
No 181
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=89.81 E-value=1.1 Score=45.35 Aligned_cols=78 Identities=12% Similarity=0.127 Sum_probs=48.5
Q ss_pred CCCCCCcCCCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHH
Q 041518 28 CKSDDKQQRIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAI 106 (765)
Q Consensus 28 ~~~~~~~~~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~ 106 (765)
+......+|.|++||.|+ |.++..+++.+.+.|+++++++.+..... ...+.++ ..|.+.+.++++
T Consensus 13 ~~~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d-------~~d~~~v~~~~~ 79 (251)
T 3orf_A 13 GLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIK-------DSGEEEIKSVIE 79 (251)
T ss_dssp ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECS-------CSSHHHHHHHHH
T ss_pred cccccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEE-------eCCHHHHHHHHH
Confidence 333444567899999994 68999999999999999988876554322 2233332 355666666665
Q ss_pred Hh-----CCCEEEeCCC
Q 041518 107 RT-----GAQAIHPGYG 118 (765)
Q Consensus 107 ~~-----~~DaV~pg~g 118 (765)
+. ++|.++-.-|
T Consensus 80 ~~~~~~g~iD~li~~Ag 96 (251)
T 3orf_A 80 KINSKSIKVDTFVCAAG 96 (251)
T ss_dssp HHHTTTCCEEEEEECCC
T ss_pred HHHHHcCCCCEEEECCc
Confidence 54 6788886543
No 182
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=89.71 E-value=0.82 Score=46.77 Aligned_cols=60 Identities=10% Similarity=0.117 Sum_probs=47.0
Q ss_pred CC-EEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IE-KILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~k-kILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
|| ||||+| .|.++..+++.+.+.|++++++... .-+..|.+.+.++.+..++|+|+
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~~~d~vi 61 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEIRPHIII 61 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHHCCSEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhcCCCEEE
Confidence 45 999999 5899999999999999998887531 12346778888888888999998
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-.-+
T Consensus 62 ~~a~ 65 (287)
T 3sc6_A 62 HCAA 65 (287)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 6543
No 183
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.64 E-value=1.5 Score=46.98 Aligned_cols=77 Identities=8% Similarity=-0.114 Sum_probs=51.0
Q ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCC--cccccc---------c-EEEEcCCCCcCcCCCCHHHH
Q 041518 35 QRIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDS--LHVKSA---------D-EAIRIGPPPARLSYLNGSSI 101 (765)
Q Consensus 35 ~~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~--~~~~~a---------D-~~~~i~~~~~~~syld~~~I 101 (765)
.|+|+|||+|+ |.++..+++.+.+.|++++++..+..... ....+. . +.+. -+..|.+.+
T Consensus 26 ~M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~Dl~d~~~~ 98 (381)
T 1n7h_A 26 EPRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY-------ADLTDASSL 98 (381)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEE-------CCTTCHHHH
T ss_pred hhCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEE-------CCCCCHHHH
Confidence 35589999995 89999999999999999988865433210 000110 1 1122 145677888
Q ss_pred HHHHHHhCCCEEEeCCC
Q 041518 102 VDAAIRTGAQAIHPGYG 118 (765)
Q Consensus 102 l~~a~~~~~DaV~pg~g 118 (765)
.++++..++|+|+-.-+
T Consensus 99 ~~~~~~~~~d~Vih~A~ 115 (381)
T 1n7h_A 99 RRWIDVIKPDEVYNLAA 115 (381)
T ss_dssp HHHHHHHCCSEEEECCS
T ss_pred HHHHHhcCCCEEEECCc
Confidence 88887778999886543
No 184
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=89.54 E-value=1.8 Score=44.96 Aligned_cols=121 Identities=17% Similarity=0.185 Sum_probs=74.2
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCC-CCCCcc-cc------c-ccEEEEcCCCCcCcCCCCHHHHHHHH
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDA-DRDSLH-VK------S-ADEAIRIGPPPARLSYLNGSSIVDAA 105 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~-d~~~~~-~~------~-aD~~~~i~~~~~~~syld~~~Il~~a 105 (765)
||++|||+| .|.++..+++.+.+.|++++++..+. ....+. .. . --+.+. -++.|.+.+.+++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~-------~D~~d~~~l~~a~ 75 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE-------GEMEEHEKMVSVL 75 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEE-------CCTTCHHHHHHHH
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEE-------ecCCCHHHHHHHH
Confidence 467899999 48999999999999999988876554 211010 00 0 012222 2467778887777
Q ss_pred HHhCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc-EE----CCcH-------HHHHHhcCHHHHHHHHHHCCCCC
Q 041518 106 IRTGAQAIHPGYGFLS--ESADFAQLCGDNG-LT-FI----GPPV-------SAIRDMGDKSASKRIMGAAGVPL 165 (765)
Q Consensus 106 ~~~~~DaV~pg~g~ls--E~~~~a~~~~~~G-l~-~~----Gp~~-------eai~~~~DK~~~r~~l~~~Gvpv 165 (765)
+ ++|+|+...+... -...+.+++.+.| +. ++ |.+. ........|....+++++.|++.
T Consensus 76 ~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~ 148 (321)
T 3c1o_A 76 K--QVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPY 148 (321)
T ss_dssp T--TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred c--CCCEEEECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHHHcCCCe
Confidence 4 6899887654321 1245667777777 53 22 2110 00122367888888888888775
No 185
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=89.17 E-value=1.4 Score=45.33 Aligned_cols=119 Identities=19% Similarity=0.243 Sum_probs=70.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCC-CCCCc--cc----cc---ccEEEEcCCCCcCcCCCCHHHHHHHH
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDA-DRDSL--HV----KS---ADEAIRIGPPPARLSYLNGSSIVDAA 105 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~-d~~~~--~~----~~---aD~~~~i~~~~~~~syld~~~Il~~a 105 (765)
|++|||+|+ |.++..+++.+.+.|++++++..+. ....+ .. .+ --+.+. -++.|.+.+.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d~~~l~~~~ 74 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE-------GDINDHETLVKAI 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEE-------CCTTCHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEE-------eCCCCHHHHHHHH
Confidence 568999995 8999999999999999988876543 11111 00 00 012222 2457777877777
Q ss_pred HHhCCCEEEeCCCccc--ccHHHHHHHHHCC-Cc-EE----CC--------cHHHHHHhcCHHHHHHHHHHCCCCC
Q 041518 106 IRTGAQAIHPGYGFLS--ESADFAQLCGDNG-LT-FI----GP--------PVSAIRDMGDKSASKRIMGAAGVPL 165 (765)
Q Consensus 106 ~~~~~DaV~pg~g~ls--E~~~~a~~~~~~G-l~-~~----Gp--------~~eai~~~~DK~~~r~~l~~~Gvpv 165 (765)
+ ++|+|+...+... -...+.+++.+.| +. ++ |. .+. ......|....+++++.|++.
T Consensus 75 ~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~-~~~y~sK~~~e~~~~~~~i~~ 147 (307)
T 2gas_A 75 K--QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPV-RQVFEEKASIRRVIEAEGVPY 147 (307)
T ss_dssp T--TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTH-HHHHHHHHHHHHHHHHHTCCB
T ss_pred h--CCCEEEECCcccccccHHHHHHHHHhcCCceEEeecccccCcccccCCCcc-hhHHHHHHHHHHHHHHcCCCe
Confidence 4 6999886644321 1234566777776 54 32 21 011 112255666667777777664
No 186
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=88.88 E-value=3.2 Score=43.46 Aligned_cols=73 Identities=12% Similarity=0.036 Sum_probs=49.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCC--CeEEEEecCCCCCCcccccc------c-EEEEcCCCCcCcCCCCHHHHHHHHH
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLG--IRTVAVYSDADRDSLHVKSA------D-EAIRIGPPPARLSYLNGSSIVDAAI 106 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~G--i~vvav~s~~d~~~~~~~~a------D-~~~~i~~~~~~~syld~~~Il~~a~ 106 (765)
+++|||+|+ |.++..+++.+.+.| ++++++......... ..+. . +.+. -+..|.+.+.++++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~-~~l~~~~~~~~~~~~~-------~Dl~d~~~~~~~~~ 95 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNL-NNVKSIQDHPNYYFVK-------GEIQNGELLEHVIK 95 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCG-GGGTTTTTCTTEEEEE-------CCTTCHHHHHHHHH
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccch-hhhhhhccCCCeEEEE-------cCCCCHHHHHHHHh
Confidence 579999995 899999999999999 777776543311111 1110 1 1222 24578888999998
Q ss_pred HhCCCEEEeCC
Q 041518 107 RTGAQAIHPGY 117 (765)
Q Consensus 107 ~~~~DaV~pg~ 117 (765)
..++|.|+-.-
T Consensus 96 ~~~~d~Vih~A 106 (346)
T 4egb_A 96 ERDVQVIVNFA 106 (346)
T ss_dssp HHTCCEEEECC
T ss_pred hcCCCEEEECC
Confidence 88899988553
No 187
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=88.76 E-value=0.34 Score=51.98 Aligned_cols=48 Identities=27% Similarity=0.413 Sum_probs=39.6
Q ss_pred EEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEE-----------------------------cCCCCccCCCC
Q 041518 662 KVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQ-----------------------------VTAGQQVSDGS 712 (765)
Q Consensus 662 ~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~-----------------------------~~~G~~v~~g~ 712 (765)
.++|++|+.|++||.|+.=. +|.|..+|+|.+.. ++.|+.|.+|+
T Consensus 62 ~l~v~~g~~V~~g~~la~wd------pii~e~~G~v~~~~~~~~p~i~i~d~~g~~~y~lp~ga~l~~~v~~g~~v~~G~ 135 (352)
T 2xhc_A 62 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVDVKNVRKIVVETIDRKYTKTYYIPESAGIEPGLRVGTKVKQGL 135 (352)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEEEEEEEEEEEECTTCSSEEEEEEEGGGCBCTTCCTTCEECTTC
T ss_pred EEEecCCCEEcCCCEEEEec------cEEEecceEEEeeccCCceEEEEEcCCCCEEEEcCCCcEEEEecCCCCEEccCc
Confidence 37899999999999999966 77777777775433 77899999999
Q ss_pred eEE
Q 041518 713 VLF 715 (765)
Q Consensus 713 ~l~ 715 (765)
+|+
T Consensus 136 vla 138 (352)
T 2xhc_A 136 PLS 138 (352)
T ss_dssp BSB
T ss_pred EEe
Confidence 888
No 188
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus}
Probab=88.61 E-value=0.84 Score=50.86 Aligned_cols=70 Identities=19% Similarity=0.263 Sum_probs=48.1
Q ss_pred CCCCCCccccCCCCHHHHHHHHHHhCCcEEEeecCCCCCccEEE--ECChhHHHHHHHHHHHHHHhcCCCCcEEEecccC
Q 041518 162 GVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKPTHGGGGKGMRI--VQSPNDFVDSFLGAQREAAASFGINTILLEKYIT 239 (765)
Q Consensus 162 Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP~~g~Gg~Gv~~--v~s~~el~~a~~~~~~ea~~~fg~~~vlVEeyI~ 239 (765)
=++.+|++.+. +.++.....+... -+||||..|.||.||.+ --+.++.++..+++... ...+++|++++
T Consensus 340 il~~VpT~~c~--~~~~~~~vl~~l~-~lViKp~~g~gg~gv~iG~~~s~~e~~~~~~~i~~~------p~~yIaQe~v~ 410 (474)
T 3n6x_A 340 ILSNVPTYQLS--KADDLKYVLDNLA-ELVVKEVQGSGGYGMLVGPAASKQELEDFRQRILAN------PANYIAQPTLA 410 (474)
T ss_dssp SSEECCCEETT--SHHHHHHHHHSGG-GEEEEECCCE-----EEGGGCCHHHHHHHHHHHHHS------GGGEEEEECCC
T ss_pred hccCCCceecC--CHHHHHHHHhchh-heEEEecCCCCCCceEECCcCCHHHHHHHHHHHHhC------CCCEEEeeccC
Confidence 34555666654 7777777777665 89999999999999988 45677888777776542 34699999998
Q ss_pred C
Q 041518 240 Q 240 (765)
Q Consensus 240 g 240 (765)
-
T Consensus 411 l 411 (474)
T 3n6x_A 411 L 411 (474)
T ss_dssp C
T ss_pred C
Confidence 4
No 189
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.61 E-value=0.66 Score=43.06 Aligned_cols=89 Identities=11% Similarity=0.073 Sum_probs=51.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc--cc-cEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK--SA-DEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~--~a-D~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
.++++|+|.|.++..+++.+.+.|++++++..++........ .. +..+..+ +..+.+.+.+ +.-.++|+|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~g------d~~~~~~l~~-a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPG------DSNDSSVLKK-AGIDRCRAI 75 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEES------CTTSHHHHHH-HTTTTCSEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEc------CCCCHHHHHH-cChhhCCEE
Confidence 368999999999999999999999999998764311000010 11 1122222 2345444433 323578999
Q ss_pred EeCCCcccccHHHHHHHHH
Q 041518 114 HPGYGFLSESADFAQLCGD 132 (765)
Q Consensus 114 ~pg~g~lsE~~~~a~~~~~ 132 (765)
+...+....|...+..+.+
T Consensus 76 i~~~~~d~~n~~~~~~a~~ 94 (153)
T 1id1_A 76 LALSDNDADNAFVVLSAKD 94 (153)
T ss_dssp EECSSCHHHHHHHHHHHHH
T ss_pred EEecCChHHHHHHHHHHHH
Confidence 8776543333334444443
No 190
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=88.56 E-value=1.3 Score=43.83 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=29.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.+|++||+|+|..+..+++.+++.||+++++..|
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd 44 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRACGETVAAIVDA 44 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeC
Confidence 4689999999999999999999999998877543
No 191
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=88.51 E-value=2.4 Score=45.41 Aligned_cols=74 Identities=19% Similarity=0.083 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+|++|||+|+ |.++..+++.+.+.|++++++..+..........--+.+.. +..|.+.+.+++ .++|+|+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~-------Dl~d~~~~~~~~--~~~d~Vi 98 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLV-------DLRVMENCLKVT--EGVDHVF 98 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEEC-------CTTSHHHHHHHH--TTCSEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEEC-------CCCCHHHHHHHh--CCCCEEE
Confidence 4679999995 89999999999999999988875543321111001122322 346677777766 3799988
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-.-+
T Consensus 99 h~A~ 102 (379)
T 2c5a_A 99 NLAA 102 (379)
T ss_dssp ECCC
T ss_pred ECce
Confidence 6543
No 192
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=88.40 E-value=0.22 Score=53.94 Aligned_cols=58 Identities=16% Similarity=0.167 Sum_probs=41.5
Q ss_pred EEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 663 VLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 663 ~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
..|+.|+.-..=..-..+++. -+..|.++.+|+|.++++++||.|.+|++|++|+..+
T Consensus 21 ~~v~~~~~~~~~~~~G~v~~~-~~~~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~ 78 (369)
T 1vf7_A 21 VTLEAQTVTLNTELPGRTNAF-RIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPAT 78 (369)
T ss_dssp --------CCEEEEEEECEES-CEEEECCSSCEEEEECCSCSSEEECTTSEEEEECCHH
T ss_pred EEEEeeccceEEEEEEEEEee-eEEEEEeeCceEEEEEEcCCCCEEcCCCEEEEECcHH
Confidence 345566554444556677775 3578999999999999999999999999999998654
No 193
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=88.29 E-value=1.7 Score=45.71 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=50.6
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-ccc-EEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-SAD-EAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~aD-~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
.|++|||+| .|.++..+++.+.+.|++++++..+......... +.. +.+.. +..|.+.+.++++..++|+
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~D~ 92 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEG-------SIADHALVNQLIGDLQPDA 92 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEEC-------CTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEE-------eCCCHHHHHHHHhccCCcE
Confidence 357999999 6899999999999999999888654322111111 011 12222 4567778888887777999
Q ss_pred EEeCCC
Q 041518 113 IHPGYG 118 (765)
Q Consensus 113 V~pg~g 118 (765)
|+-.-+
T Consensus 93 vih~A~ 98 (333)
T 2q1w_A 93 VVHTAA 98 (333)
T ss_dssp EEECCC
T ss_pred EEECce
Confidence 886543
No 194
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=88.23 E-value=1 Score=49.28 Aligned_cols=122 Identities=10% Similarity=0.047 Sum_probs=75.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCC---eEEEEecCCCCCCccccccc----------EEEEcCCCCcCcCCCCHHHHHH
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGI---RTVAVYSDADRDSLHVKSAD----------EAIRIGPPPARLSYLNGSSIVD 103 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi---~vvav~s~~d~~~~~~~~aD----------~~~~i~~~~~~~syld~~~Il~ 103 (765)
|+||||+|.|.++..+++.+.+.|- .+++++.+.+. ...+++ ..+.+ +..+.+.+.+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~---~~~la~~l~~~~~~~~~~~~~-------D~~d~~~l~~ 70 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSK---CQEIAQSIKAKGYGEIDITTV-------DADSIEELVA 70 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHH---HHHHHHHHHHTTCCCCEEEEC-------CTTCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHH---HHHHHHHhhhhcCCceEEEEe-------cCCCHHHHHH
Confidence 4799999999999999999999983 65555433221 111111 12222 3356788888
Q ss_pred HHHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEE-CCcHHHH--H--HhcCHHHHHHHHHHCCCCCCCcc
Q 041518 104 AAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFI-GPPVSAI--R--DMGDKSASKRIMGAAGVPLVPGY 169 (765)
Q Consensus 104 ~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~-Gp~~eai--~--~~~DK~~~r~~l~~~Gvpvp~~~ 169 (765)
++++.++|+|+...+.. .+..+.+.|.+.|..++ ..+.... . .......+.+.++++|+....+.
T Consensus 71 ~l~~~~~DvVin~ag~~-~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~ 140 (405)
T 4ina_A 71 LINEVKPQIVLNIALPY-QDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGS 140 (405)
T ss_dssp HHHHHCCSEEEECSCGG-GHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECC
T ss_pred HHHhhCCCEEEECCCcc-cChHHHHHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcC
Confidence 88888899999765443 24667788888898877 1111100 0 00011256677788888766554
No 195
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=88.15 E-value=2.3 Score=45.29 Aligned_cols=79 Identities=8% Similarity=-0.078 Sum_probs=51.3
Q ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCC--cccccc--------cEEEEcCCCCcCcCCCCHHHHHH
Q 041518 35 QRIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDS--LHVKSA--------DEAIRIGPPPARLSYLNGSSIVD 103 (765)
Q Consensus 35 ~~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~--~~~~~a--------D~~~~i~~~~~~~syld~~~Il~ 103 (765)
.||++|||+| .|.++..+++.+.+.|++++++..+..... ....+. .....+ .-+..|.+.+.+
T Consensus 22 ~M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~ 96 (375)
T 1t2a_A 22 HMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH-----YGDLTDSTCLVK 96 (375)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEE-----ECCTTCHHHHHH
T ss_pred hcCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEE-----EccCCCHHHHHH
Confidence 3568999999 589999999999999999988875443210 011110 011111 124567788888
Q ss_pred HHHHhCCCEEEeCCC
Q 041518 104 AAIRTGAQAIHPGYG 118 (765)
Q Consensus 104 ~a~~~~~DaV~pg~g 118 (765)
+++..++|.|+-.-+
T Consensus 97 ~~~~~~~d~vih~A~ 111 (375)
T 1t2a_A 97 IINEVKPTEIYNLGA 111 (375)
T ss_dssp HHHHHCCSEEEECCS
T ss_pred HHHhcCCCEEEECCC
Confidence 888778999886543
No 196
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=87.81 E-value=0.44 Score=52.37 Aligned_cols=59 Identities=17% Similarity=0.159 Sum_probs=45.5
Q ss_pred EEcCCCCeecCCCeEEEEEec-ceEEEEEcCCCeEEEEEEc-CCCCccCCCCeEEEEEeCc
Q 041518 663 VLANDGTKVEEGQPILVLEAM-KMEHVVKAPTTGVVHGLQV-TAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 663 ~~v~~Gd~V~~G~~l~~~eam-Km~~~i~ap~~G~v~~~~~-~~G~~v~~g~~l~~i~~~~ 721 (765)
..|+.|+.-..=.....+++. .-+..|.++.+|+|.++++ ++||.|++|++|++|...+
T Consensus 97 ~~v~~~~~~~~v~~~G~V~~~~~~~~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~ 157 (413)
T 3ne5_B 97 ATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPD 157 (413)
T ss_dssp EECEEECCEEEEEEEEEEEEEEEEEEEECCSSCEEEEEECSCCTTCEECTTCEEEEEECCS
T ss_pred EEEEEeecceEEEEEEEEEECCCceEEEecccCEEEEEEEeCCCCCEEcCCCEEEEEcCHH
Confidence 334555555554556666653 4568899999999999998 9999999999999999654
No 197
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=87.63 E-value=0.74 Score=47.54 Aligned_cols=35 Identities=17% Similarity=0.212 Sum_probs=30.8
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 35 QRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 35 ~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|+++|+|+|+|..++..+..+++.|++++++..+
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc
Confidence 35679999999999999999999999998887654
No 198
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=87.56 E-value=1.8 Score=45.29 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=45.9
Q ss_pred EEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc---EEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 39 KILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSAD---EAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 39 kILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD---~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+|||+| .|.++..+++.+.+.|++++++..+.... ..+.+ +.+.. +..|.+.+.++++ ++|+|+
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~l~~~~~~~~~~-------Dl~d~~~~~~~~~--~~d~vi 82 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI---QRLAYLEPECRVA-------EMLDHAGLERALR--GLDGVI 82 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG---GGGGGGCCEEEEC-------CTTCHHHHHHHTT--TCSEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh---hhhccCCeEEEEe-------cCCCHHHHHHHHc--CCCEEE
Confidence 899999 58999999999999999998887554321 11111 22222 3467777777664 689888
Q ss_pred eCC
Q 041518 115 PGY 117 (765)
Q Consensus 115 pg~ 117 (765)
-.-
T Consensus 83 h~a 85 (342)
T 2x4g_A 83 FSA 85 (342)
T ss_dssp EC-
T ss_pred ECC
Confidence 553
No 199
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=87.48 E-value=1.9 Score=45.06 Aligned_cols=79 Identities=13% Similarity=0.130 Sum_probs=50.6
Q ss_pred CcCCCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCc-ccc-c---cc-EEEEcCCCCcCcCCCCHHHHHHHH
Q 041518 33 KQQRIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSL-HVK-S---AD-EAIRIGPPPARLSYLNGSSIVDAA 105 (765)
Q Consensus 33 ~~~~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~-~~~-~---aD-~~~~i~~~~~~~syld~~~Il~~a 105 (765)
.+.++++|||+| .|.++..+++.+.+.|++++++..+...... ... + .. +.+.. +..|.+.+.+++
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~ 82 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDG-------DMADACSVQRAV 82 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEEC-------CTTCHHHHHHHH
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEEC-------CCCCHHHHHHHH
Confidence 344678999999 5899999999999999999888754432110 000 0 01 12222 446778888888
Q ss_pred HHhCCCEEEeCCC
Q 041518 106 IRTGAQAIHPGYG 118 (765)
Q Consensus 106 ~~~~~DaV~pg~g 118 (765)
+..++|+|+-.-+
T Consensus 83 ~~~~~d~Vih~A~ 95 (335)
T 1rpn_A 83 IKAQPQEVYNLAA 95 (335)
T ss_dssp HHHCCSEEEECCS
T ss_pred HHcCCCEEEECcc
Confidence 8778999886543
No 200
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=87.27 E-value=0.11 Score=50.67 Aligned_cols=47 Identities=23% Similarity=0.338 Sum_probs=38.1
Q ss_pred EcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEE--------------------------E--EcCCCCccCCCCeEE
Q 041518 664 LANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHG--------------------------L--QVTAGQQVSDGSVLF 715 (765)
Q Consensus 664 ~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~--------------------------~--~~~~G~~v~~g~~l~ 715 (765)
.|++|+.|++||+|+ -+..|.|+.+|+|.- + +|++||.|.+|+.|+
T Consensus 84 ~V~dG~~V~~GdvLA------Kd~AIiaEIdG~V~fgkgkrrivI~~~~Ge~~eylIPk~k~i~~~V~eGd~V~~Ge~L~ 157 (193)
T 2xha_A 84 GLRVGTKVKQGLPLS------KNEEYICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLA 157 (193)
T ss_dssp TCCTTCEECTTSBSS------TTSCSBCCSSEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEE
T ss_pred EcCCCCEEcCCCEEe------cCCeEEEccceEEEECCCeEEEEEECCCCCEEEEEeCCCCccccccCCCCEECCCCCcc
Confidence 379999999999998 356677888887752 3 789999999999987
Q ss_pred E
Q 041518 716 R 716 (765)
Q Consensus 716 ~ 716 (765)
.
T Consensus 158 D 158 (193)
T 2xha_A 158 E 158 (193)
T ss_dssp C
T ss_pred c
Confidence 4
No 201
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=86.96 E-value=1.1 Score=46.38 Aligned_cols=74 Identities=18% Similarity=0.069 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHC--CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRL--GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~--Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
|.++|||+|+ |.++..+++.+.+. |++++++........ ...-. +.+.. +..|.+.+.+++++.++|+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~~~-~~~~~-------D~~d~~~~~~~~~~~~~d~ 71 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VVNSG-PFEVV-------NALDFNQIEHLVEVHKITD 71 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HHHSS-CEEEC-------CTTCHHHHHHHHHHTTCCE
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-ccCCC-ceEEe-------cCCCHHHHHHHHhhcCCCE
Confidence 4468999995 89999999999998 899888865433311 00001 12222 4567788888888779999
Q ss_pred EEeCCC
Q 041518 113 IHPGYG 118 (765)
Q Consensus 113 V~pg~g 118 (765)
|+-.-+
T Consensus 72 vih~a~ 77 (312)
T 2yy7_A 72 IYLMAA 77 (312)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886543
No 202
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=86.88 E-value=2.2 Score=44.64 Aligned_cols=74 Identities=14% Similarity=0.032 Sum_probs=49.8
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcc-ccccc-EEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 38 EKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLH-VKSAD-EAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 38 kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~-~~~aD-~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
++|||+|+ |.++..+++.+.+.|++++++..+....... ..+.. +.+.. +..|.+.+.+++++.++|+|+
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~-------Dl~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEG-------SVTDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEEC-------CTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEe-------eCCCHHHHHHHHhhcCCCEEE
Confidence 58999995 8999999999999999998886543221100 11111 12221 346777888888777999988
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-.-+
T Consensus 94 h~A~ 97 (330)
T 2pzm_A 94 HSAA 97 (330)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 6543
No 203
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=86.79 E-value=2.2 Score=44.63 Aligned_cols=76 Identities=9% Similarity=-0.053 Sum_probs=51.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc-----ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKS-----ADEAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~-----aD~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
.++|||.| .|.++..+++.+.+.|+++++++.+.......... ......+ .-+..|.+.+.+++++.++
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~~~~~ 79 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFH-----ETDVSDERALARIFDAHPI 79 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEE-----CCCTTCHHHHHHHHHHSCC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEE-----EeecCCHHHHHHHHhccCC
Confidence 46999999 58999999999999999998876543332111100 0011111 1245778888888888889
Q ss_pred CEEEeCC
Q 041518 111 QAIHPGY 117 (765)
Q Consensus 111 DaV~pg~ 117 (765)
|.|+-.-
T Consensus 80 d~vih~A 86 (341)
T 3enk_A 80 TAAIHFA 86 (341)
T ss_dssp CEEEECC
T ss_pred cEEEECc
Confidence 9988554
No 204
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.77 E-value=0.3 Score=53.78 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=31.4
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADR 72 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~ 72 (765)
.+|+|+|.|..+..+++.+++.|+.+++++.+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~ 39 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDH 39 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence 47999999999999999999999999999876543
No 205
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=86.68 E-value=1.6 Score=44.98 Aligned_cols=73 Identities=14% Similarity=0.078 Sum_probs=48.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCC-CeEEEEecCCCCCC-ccccc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLG-IRTVAVYSDADRDS-LHVKS-ADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~G-i~vvav~s~~d~~~-~~~~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
+++|||+|+ |.++..+++.+.+.| ++++++..+++... ..... --+.+. -++.|.+.+.++++ ++|.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~-------~D~~d~~~l~~~~~--~~d~ 75 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQ-------GDQDDQVIMELALN--GAYA 75 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEE-------CCTTCHHHHHHHHT--TCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEE-------ecCCCHHHHHHHHh--cCCE
Confidence 479999995 899999999999999 99888875543310 00000 012222 24577777777763 6899
Q ss_pred EEeCCC
Q 041518 113 IHPGYG 118 (765)
Q Consensus 113 V~pg~g 118 (765)
|+-..+
T Consensus 76 vi~~a~ 81 (299)
T 2wm3_A 76 TFIVTN 81 (299)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 886644
No 206
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.66 E-value=0.66 Score=45.83 Aligned_cols=87 Identities=16% Similarity=0.031 Sum_probs=51.8
Q ss_pred EEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCCC
Q 041518 39 KILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYG 118 (765)
Q Consensus 39 kILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~g 118 (765)
||+|+|.|.++..+++.+.+.|+++++++.+++.........+..+..+ +..+.+.+. .+.-.++|+|+...+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~g------d~~~~~~l~-~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHG------DGSHKEILR-DAEVSKNDVVVILTP 74 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEES------CTTSHHHHH-HHTCCTTCEEEECCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEc------CCCCHHHHH-hcCcccCCEEEEecC
Confidence 6999999999999999999999999998765432111111112222222 224444433 333357899987765
Q ss_pred cccccHHHHHHHHH
Q 041518 119 FLSESADFAQLCGD 132 (765)
Q Consensus 119 ~lsE~~~~a~~~~~ 132 (765)
...++...+..+.+
T Consensus 75 ~d~~n~~~~~~a~~ 88 (218)
T 3l4b_C 75 RDEVNLFIAQLVMK 88 (218)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 44334344444443
No 207
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=86.21 E-value=4.5 Score=42.45 Aligned_cols=92 Identities=17% Similarity=0.058 Sum_probs=62.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHH------HhC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAI------RTG 109 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~------~~~ 109 (765)
|.||.|+|. |.++...++++++.|.+++++.. .+... ...+.. + +...-|.+.+.+++... ..+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d-~~~~~--~~~~~~-~-----~~~~~~~~~~~ll~~~~~l~~~~~~~ 73 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYD-INDSV--GIIDSI-S-----PQSEFFTEFEFFLDHASNLKRDSATA 73 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEEC-SSCCC--GGGGGT-C-----TTCEEESSHHHHHHHHHHHTTSTTTS
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEc-CCHHH--HHHHhh-C-----CCCcEECCHHHHHHhhhhhhhccCCC
Confidence 569999998 67898999999999999988874 33321 122221 1 11234678888886543 467
Q ss_pred CCEEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 110 AQAIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 110 ~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
+|+|+...-. .-+..++..+.++|..++
T Consensus 74 vD~V~I~tP~-~~H~~~~~~al~aGkhVl 101 (318)
T 3oa2_A 74 LDYVSICSPN-YLHYPHIAAGLRLGCDVI 101 (318)
T ss_dssp CCEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred CcEEEECCCc-HHHHHHHHHHHHCCCeEE
Confidence 9999876422 234677778888898877
No 208
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=86.20 E-value=1.3 Score=45.13 Aligned_cols=71 Identities=8% Similarity=0.135 Sum_probs=49.3
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+||+|||.| .|.++..+++.+.+.|++++++..+..... ..--+.+.. +..|.+.+.++++ ++|.|+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~-------Dl~d~~~~~~~~~--~~D~vi 69 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQC-------DLADANAVNAMVA--GCDGIV 69 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEEC-------CTTCHHHHHHHHT--TCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEc-------CCCCHHHHHHHHc--CCCEEE
Confidence 368999999 688999999999999999888776544322 111122322 3467777877775 789988
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-.-+
T Consensus 70 ~~Ag 73 (267)
T 3rft_A 70 HLGG 73 (267)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 5543
No 209
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=86.04 E-value=1.3 Score=46.64 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
..|+|||+|+ |.++..+++.+.+.|++|+++...... ... +.+.. +..|.+.+.++++ ++|+|+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--~~~----~~~~~-------Dl~d~~~~~~~~~--~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--TGG----EEVVG-------SLEDGQALSDAIM--GVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--SCC----SEEES-------CTTCHHHHHHHHT--TCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--CCc----cEEec-------CcCCHHHHHHHHh--CCCEEE
Confidence 4578999995 899999999999999999988755433 111 12222 3467777777775 899988
Q ss_pred eC
Q 041518 115 PG 116 (765)
Q Consensus 115 pg 116 (765)
-.
T Consensus 83 h~ 84 (347)
T 4id9_A 83 HL 84 (347)
T ss_dssp EC
T ss_pred EC
Confidence 55
No 210
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=85.85 E-value=3.8 Score=41.55 Aligned_cols=92 Identities=14% Similarity=0.137 Sum_probs=52.9
Q ss_pred EEEEEcC-cHHHHHHHHHHHHC-CCeEEEEecCCCCCCccc-ccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 39 KILIANR-GEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHV-KSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 39 kILI~g~-G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~-~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
||+|+|. |.++..+++.+.+. |++++++....+...... .-+|-.+..-. .......+..|.+.+.+.|+.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~------p~a~~~~~~~a~~~g~~~Vig 75 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTH------PDVVMGNLEFLIDNGIHAVVG 75 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSC------TTTHHHHHHHHHHTTCEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccC------hHHHHHHHHHHHHcCCCEEEc
Confidence 8999995 99999999999876 999887764321111111 13454442211 123455666667777777775
Q ss_pred CCCccccc-HHHHHHHHHC-CCc
Q 041518 116 GYGFLSES-ADFAQLCGDN-GLT 136 (765)
Q Consensus 116 g~g~lsE~-~~~a~~~~~~-Gl~ 136 (765)
..|+..|. ..+.+++++. +++
T Consensus 76 TTG~~~e~~~~l~~aa~~~~~~~ 98 (245)
T 1p9l_A 76 TTGFTAERFQQVESWLVAKPNTS 98 (245)
T ss_dssp CCCCCHHHHHHHHHHHHTSTTCE
T ss_pred CCCCCHHHHHHHHHHHHhCCCCC
Confidence 55543332 2333444433 554
No 211
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=85.64 E-value=1.1 Score=55.65 Aligned_cols=131 Identities=21% Similarity=0.302 Sum_probs=104.9
Q ss_pred ceEEEEE-CCEEEEEEEEEeeccc-ce--EEEEEeCCeeEEEEEecCCCCCCccccccccccccCCCCCCcccCCCcceE
Q 041518 585 HKFRVEF-DVVSMDVHLAVYNKGR-IK--HIHAWHGLHHHHFKQKLGLELPDEDETQHKTSFETATGPPGSVLSPMAGLV 660 (765)
Q Consensus 585 ~~l~~~~-~G~~~~~~~~~~~~~~-~~--~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ap~~G~v 660 (765)
..+.+++ .|+.+.+.+...+.-. .+ .+.+..+|+.+.+.+.+..... ......++.+.+...|.|||+|+|
T Consensus 1014 ~~~~~~~~~g~~~~i~l~~~~~~~~~g~~~~~~e~nG~~~~v~v~~~~~~~-----~~~~~~~~~~~~~~~v~ap~~G~v 1088 (1150)
T 3hbl_A 1014 ETVEIEIDKGKRLIIKLETISEPDENGNRTIYYAMNGQARRIYIKDENVHT-----NANVKPKADKSNPSHIGAQMPGSV 1088 (1150)
T ss_dssp CEEEEEEETTEEEEEEEEEECCCCTTSEEEEEEEETTEEEEEEEECCCSSS-----CCCCCCBCCTTCSSEEECSSSEEE
T ss_pred ceEEEEccCCcEEEEEecccCCCCCCCceEEEEEECCeEEEEecccccccc-----cccccccCCCCCCceeecCceEEE
Confidence 3455555 5898888876654211 12 3677789999999988765431 111223445667789999999999
Q ss_pred EEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeC
Q 041518 661 VKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAV 720 (765)
Q Consensus 661 ~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~ 720 (765)
++|+|++||.|++||+|++||||||+++|+||.+|+|.++++++||.|..|++|++|+++
T Consensus 1089 ~~~~v~~Gd~V~~G~~l~~ieamK~~~~i~ap~~G~v~~i~v~~G~~V~~g~~l~~i~~~ 1148 (1150)
T 3hbl_A 1089 TEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIEKA 1148 (1150)
T ss_dssp EEECCCTTCEECTTCEEEEEESSSCEEEEECSSSEEEEEECCCTTCEECTTBEEEEEC--
T ss_pred EEEEeCCCCEECCCCEEEEEEeccceeEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999764
No 212
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=85.61 E-value=1.9 Score=45.27 Aligned_cols=76 Identities=14% Similarity=0.095 Sum_probs=49.8
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCC------CCccc-cc----cc--EEEEcCCCCcCcCCCCHHHH
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADR------DSLHV-KS----AD--EAIRIGPPPARLSYLNGSSI 101 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~------~~~~~-~~----aD--~~~~i~~~~~~~syld~~~I 101 (765)
|.++|||+| .|.++..+++.+.+.|++++++...... ..... .+ .. +.+.. +..+.+.+
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-------D~~~~~~~ 73 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEM-------DILDQGAL 73 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEEC-------CTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEEC-------CCCCHHHH
Confidence 457999999 5899999999999999999887643221 00000 00 01 22222 34677778
Q ss_pred HHHHHHhCCCEEEeCCC
Q 041518 102 VDAAIRTGAQAIHPGYG 118 (765)
Q Consensus 102 l~~a~~~~~DaV~pg~g 118 (765)
.+++++.++|.|+-.-+
T Consensus 74 ~~~~~~~~~d~vih~A~ 90 (348)
T 1ek6_A 74 QRLFKKYSFMAVIHFAG 90 (348)
T ss_dssp HHHHHHCCEEEEEECCS
T ss_pred HHHHHhcCCCEEEECCC
Confidence 77777668898886543
No 213
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.44 E-value=0.71 Score=44.15 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=30.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~ 70 (765)
-++|+|+|.|.++..+++.+++. |+++++++.++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35899999999999999999999 99998887554
No 214
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=85.39 E-value=3.6 Score=42.53 Aligned_cols=72 Identities=10% Similarity=0.111 Sum_probs=50.6
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
.+++|||.| .|.++..+++.+.+.|++++++..+.... . +--+.+.. +..|.+.+.++++..++|+|+
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~---l~~~~~~~-------Dl~d~~~~~~~~~~~~~d~vi 79 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAK-L---PNVEMISL-------DIMDSQRVKKVISDIKPDYIF 79 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCC-C---TTEEEEEC-------CTTCHHHHHHHHHHHCCSEEE
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc-c---ceeeEEEC-------CCCCHHHHHHHHHhcCCCEEE
Confidence 468999999 58999999999999999999887554331 1 11112222 346778888888777899988
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-.-+
T Consensus 80 h~A~ 83 (321)
T 2pk3_A 80 HLAA 83 (321)
T ss_dssp ECCS
T ss_pred EcCc
Confidence 6543
No 215
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=85.14 E-value=1.2 Score=46.24 Aligned_cols=67 Identities=9% Similarity=0.083 Sum_probs=40.1
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
|.++|||+|+ |.++..+++.+.+.|++++++..+... . . .+.. +..+.+.+.++++..++|.|+
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~-----~-~~~~-------Dl~d~~~~~~~~~~~~~d~vi 65 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--P-----K-FEQV-------NLLDSNAVHHIIHDFQPHVIV 65 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHHCCSEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--C-----C-eEEe-------cCCCHHHHHHHHHhhCCCEEE
Confidence 4579999995 899999999999999998887633221 0 1 1211 234455666666666899988
Q ss_pred eCC
Q 041518 115 PGY 117 (765)
Q Consensus 115 pg~ 117 (765)
-.-
T Consensus 66 h~A 68 (315)
T 2ydy_A 66 HCA 68 (315)
T ss_dssp ECC
T ss_pred ECC
Confidence 553
No 216
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=84.98 E-value=0.12 Score=55.65 Aligned_cols=56 Identities=23% Similarity=0.298 Sum_probs=43.0
Q ss_pred cCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 665 ANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 665 v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
|+.|+.-..=..-..+++.+ +..|.++.+|+|.++++++||.|++|++|++|+..+
T Consensus 12 v~~~~~~~~v~~~G~v~~~~-~~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~ 67 (369)
T 4dk0_A 12 VKRGNIEKNVVATGSIESIN-TVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDSTT 67 (369)
T ss_dssp CCEECCCCCCEEEEEEECSS-CCCBCCCSCSBCCEECCCTTSCCCSSCCCEECCCHH
T ss_pred EEecceeEEEEEeEEEEeee-eEEEecCCCcEEEEEEECCCCEECCCCEEEEEcCHH
Confidence 34444444444556666554 457899999999999999999999999999998764
No 217
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=84.90 E-value=0.79 Score=45.99 Aligned_cols=33 Identities=21% Similarity=0.241 Sum_probs=29.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
-++|||+|+|+.|.+.++.+.+.|.+++++..+
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 379999999999999999999999998877643
No 218
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=84.72 E-value=1.9 Score=45.40 Aligned_cols=74 Identities=9% Similarity=0.057 Sum_probs=49.7
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-c---------cc-EEEEcCCCCcCcCCCCHHHHHH
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-S---------AD-EAIRIGPPPARLSYLNGSSIVD 103 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~---------aD-~~~~i~~~~~~~syld~~~Il~ 103 (765)
++++|||+| .|.++..+++.+.+.|++++++............ + .. +.+.. +..|.+.+.+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG-------DIRDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEEC-------CTTCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEc-------cCCCHHHHHH
Confidence 358999999 5899999999999999999988754433211110 0 11 12222 3467777777
Q ss_pred HHHHhCCCEEEeCCC
Q 041518 104 AAIRTGAQAIHPGYG 118 (765)
Q Consensus 104 ~a~~~~~DaV~pg~g 118 (765)
+++ ++|+|+-.-+
T Consensus 97 ~~~--~~d~Vih~A~ 109 (351)
T 3ruf_A 97 VMK--GVDHVLHQAA 109 (351)
T ss_dssp HTT--TCSEEEECCC
T ss_pred Hhc--CCCEEEECCc
Confidence 775 8999886543
No 219
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=84.65 E-value=1.2 Score=39.94 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=28.5
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
++|+|+|.|.++..+++.+.+.|+++++++.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 38999999999999999999999998887654
No 220
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=84.63 E-value=0.87 Score=46.18 Aligned_cols=71 Identities=10% Similarity=0.055 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
|||+|||+|+ |.++..+++.+.+.|++++++..+..... . .....+. -+..|.+.+.++++ ++|.|+
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~----~~~~~~~-----~Dl~d~~~~~~~~~--~~d~vi 68 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-E----AHEEIVA-----CDLADAQAVHDLVK--DCDGII 68 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-C----TTEEECC-----CCTTCHHHHHHHHT--TCSEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-C----CCccEEE-----ccCCCHHHHHHHHc--CCCEEE
Confidence 5789999995 89999999999999999888765443211 1 1111121 24467777777764 689988
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-.-+
T Consensus 69 ~~a~ 72 (267)
T 3ay3_A 69 HLGG 72 (267)
T ss_dssp ECCS
T ss_pred ECCc
Confidence 6543
No 221
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=84.55 E-value=0.73 Score=47.14 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=30.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
||+||||+|.|.++..+++.+.+.|++++++..+.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 67899999999999999999999999998886543
No 222
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=84.37 E-value=1.7 Score=45.04 Aligned_cols=61 Identities=16% Similarity=0.240 Sum_probs=46.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
+++|||+| .|.++..+++.+.+.|++++++.... .-+..|.+.+.+++++.++|+|+-
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~~~d~vih 61 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASERIDQVYL 61 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence 46899999 58999999999999999977654221 013467788888887779999886
Q ss_pred CCC
Q 041518 116 GYG 118 (765)
Q Consensus 116 g~g 118 (765)
.-+
T Consensus 62 ~a~ 64 (321)
T 1e6u_A 62 AAA 64 (321)
T ss_dssp CCC
T ss_pred cCe
Confidence 543
No 223
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=84.13 E-value=4 Score=45.36 Aligned_cols=85 Identities=15% Similarity=0.090 Sum_probs=58.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
-||+.|.+.+..+..+++.++++|++++.+.+............++.+ + .|...+.+.+++.++|.++.+
T Consensus 313 Gkrv~i~~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~~~v~-~---------~D~~~le~~i~~~~pDllig~ 382 (458)
T 3pdi_B 313 SARTAIAADPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPSVR-V---------GDLEDLEHAARAGQAQLVIGN 382 (458)
T ss_dssp TCEEEEECCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTSSCEE-E---------SHHHHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCccCcEE-e---------CCHHHHHHHHHhcCCCEEEEC
Confidence 389999999999999999999999999988764322111111122222 1 366778888999999999955
Q ss_pred CCcccccHHHHHHHHHCCCcEE
Q 041518 117 YGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
. .| ..+.+++|+|++
T Consensus 383 ~---~~----~~~a~k~gip~~ 397 (458)
T 3pdi_B 383 S---HA----LASARRLGVPLL 397 (458)
T ss_dssp T---TH----HHHHHHTTCCEE
T ss_pred h---hH----HHHHHHcCCCEE
Confidence 2 11 245567888877
No 224
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=83.83 E-value=1.6 Score=43.44 Aligned_cols=68 Identities=12% Similarity=0.071 Sum_probs=46.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh--CCCEE
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT--GAQAI 113 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~--~~DaV 113 (765)
||+|||.|+ |.++..+++.+.+.|++++++..+.+.... + + .-+..+.+.+.+++++. ++|.|
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~----~-----~~D~~~~~~~~~~~~~~~~~~d~v 66 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----D----L-----STPGGRETAVAAVLDRCGGVLDGL 66 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----C----T-----TSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-----c----c-----cCCcccHHHHHHHHHHcCCCccEE
Confidence 579999995 889999999999999998888654332100 0 1 11234455666666665 89999
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+..-+
T Consensus 67 i~~Ag 71 (255)
T 2dkn_A 67 VCCAG 71 (255)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86544
No 225
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=83.78 E-value=4.4 Score=39.92 Aligned_cols=69 Identities=12% Similarity=0.039 Sum_probs=46.2
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh----CC
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT----GA 110 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~----~~ 110 (765)
|.|++||.| .|.++..+++.+.+.|++++++..+... ... ..+.. +..+.+.+.+++++. ++
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~--~~~----~~~~~-------D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--EDL----IYVEG-------DVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--SSS----EEEEC-------CTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccc--cce----EEEeC-------CCCCHHHHHHHHHHHHhhCCc
Confidence 357999999 5789999999999999999888755431 111 23333 235566666655543 78
Q ss_pred CEEEeCC
Q 041518 111 QAIHPGY 117 (765)
Q Consensus 111 DaV~pg~ 117 (765)
|.++..-
T Consensus 68 d~li~~a 74 (242)
T 1uay_A 68 FAVVSAA 74 (242)
T ss_dssp EEEEECC
T ss_pred eEEEEcc
Confidence 8887553
No 226
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=83.68 E-value=1.8 Score=44.03 Aligned_cols=88 Identities=14% Similarity=0.164 Sum_probs=54.4
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHC--CCeEEEEecCCCCCCccccc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 38 EKILIANR-GEIAYRIMRTAKRL--GIRTVAVYSDADRDSLHVKS-ADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 38 kkILI~g~-G~~a~~iiraar~~--Gi~vvav~s~~d~~~~~~~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
|+|||+|+ |.++..+++.+.+. |++++++..++... ..... --+.+.. ++.|.+.+.++++ ++|.|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~-------D~~d~~~l~~~~~--~~d~v 70 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA-STLADQGVEVRHG-------DYNQPESLQKAFA--GVSKL 70 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT-HHHHHTTCEEEEC-------CTTCHHHHHHHTT--TCSEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH-hHHhhcCCeEEEe-------ccCCHHHHHHHHh--cCCEE
Confidence 47999995 89999999999998 99998887554321 11100 0122222 4567777777764 68988
Q ss_pred EeCCCcccc---c----HHHHHHHHHCCC
Q 041518 114 HPGYGFLSE---S----ADFAQLCGDNGL 135 (765)
Q Consensus 114 ~pg~g~lsE---~----~~~a~~~~~~Gl 135 (765)
+-.-+...+ | ..+.+++.+.|+
T Consensus 71 i~~a~~~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 71 LFISGPHYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp EECCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred EEcCCCCcCchHHHHHHHHHHHHHHHcCC
Confidence 855332111 1 234566666775
No 227
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=83.40 E-value=4.6 Score=39.26 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=47.9
Q ss_pred EEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc-EEEEcCCCCcCcCCCC-HHHHHHHHHHhCCCEEEe
Q 041518 39 KILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSAD-EAIRIGPPPARLSYLN-GSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 39 kILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD-~~~~i~~~~~~~syld-~~~Il~~a~~~~~DaV~p 115 (765)
||||+| .|.++..+++.+.+.|++++++..+....... .. +.+.. +..| .+.+.++++ ++|+|+-
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~-------D~~d~~~~~~~~~~--~~d~vi~ 69 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHF-------DVDWTPEEMAKQLH--GMDAIIN 69 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEEC-------CTTSCHHHHHTTTT--TCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEe-------cccCCHHHHHHHHc--CCCEEEE
Confidence 799999 68999999999999999999887654332111 11 12222 3466 677777664 7999987
Q ss_pred CCCc
Q 041518 116 GYGF 119 (765)
Q Consensus 116 g~g~ 119 (765)
.-+.
T Consensus 70 ~ag~ 73 (219)
T 3dqp_A 70 VSGS 73 (219)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 6544
No 228
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=83.37 E-value=3.4 Score=43.56 Aligned_cols=75 Identities=7% Similarity=0.003 Sum_probs=51.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc---cc--EEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKS---AD--EAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~---aD--~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
.++|||.| .|.++..+++.+.+.|++++++..+.......... .+ +.+.. +..+.+.+.++++..++
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~ 81 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIG-------DIRDQNKLLESIREFQP 81 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEEC-------CTTCHHHHHHHHHHHCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEc-------cccCHHHHHHHHHhcCC
Confidence 36899999 58999999999999999998887654332111100 01 12222 44677888888877789
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|+|+-.-+
T Consensus 82 d~vih~A~ 89 (357)
T 1rkx_A 82 EIVFHMAA 89 (357)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99886543
No 229
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=83.30 E-value=2.1 Score=44.64 Aligned_cols=87 Identities=10% Similarity=0.097 Sum_probs=54.5
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHH-CCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYR-IMRTAKR-LGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~-iiraar~-~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+.||.|+|.|.++.. .++.+++ .|+++++++.. +.. ....+++.. +. ..|.+.+.+++ ++|+|+
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~-~~~-~~~~~a~~~---~~----~~~~~~~~ll~-----~~D~V~ 71 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP-NKV-KREKICSDY---RI----MPFDSIESLAK-----KCDCIF 71 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS-CHH-HHHHHHHHH---TC----CBCSCHHHHHT-----TCSEEE
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC-CHH-HHHHHHHHc---CC----CCcCCHHHHHh-----cCCEEE
Confidence 469999999999986 8888887 47888877632 321 111222221 11 12677777765 789988
Q ss_pred eCCCcccccHHHHHHHHHCCCcEE
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
..... ..+...+..+.+.|.+++
T Consensus 72 i~tp~-~~h~~~~~~al~~gk~vl 94 (308)
T 3uuw_A 72 LHSST-ETHYEIIKILLNLGVHVY 94 (308)
T ss_dssp ECCCG-GGHHHHHHHHHHTTCEEE
T ss_pred EeCCc-HhHHHHHHHHHHCCCcEE
Confidence 66421 233555666667787765
No 230
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=83.24 E-value=3.5 Score=43.03 Aligned_cols=75 Identities=13% Similarity=0.087 Sum_probs=49.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCc--ccccc--c--EEEEcCCCCcCcCCCCHHHHHHHHHHhC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSL--HVKSA--D--EAIRIGPPPARLSYLNGSSIVDAAIRTG 109 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~--~~~~a--D--~~~~i~~~~~~~syld~~~Il~~a~~~~ 109 (765)
|++|||+| .|.++..+++.+.+.|++++++......... ...+. . +.+.. +..|.+.+.++++..+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~ 73 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHG-------DIRNKNDVTRLITKYM 73 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEEC-------CTTCHHHHHHHHHHHC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEc-------CCCCHHHHHHHHhccC
Confidence 46899999 6899999999999999999887642211100 00010 1 12222 4467788888887777
Q ss_pred CCEEEeCCC
Q 041518 110 AQAIHPGYG 118 (765)
Q Consensus 110 ~DaV~pg~g 118 (765)
+|+|+-.-+
T Consensus 74 ~d~vih~A~ 82 (347)
T 1orr_A 74 PDSCFHLAG 82 (347)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCc
Confidence 999886544
No 231
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=83.18 E-value=6.2 Score=42.79 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=31.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDAD 71 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d 71 (765)
-.+++|.|.|..+..+++.++.+||+|++++..++
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 46999999999999999999999999999886554
No 232
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=82.87 E-value=2 Score=46.15 Aligned_cols=114 Identities=11% Similarity=0.033 Sum_probs=69.5
Q ss_pred EEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCCC
Q 041518 39 KILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYG 118 (765)
Q Consensus 39 kILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~g 118 (765)
||||+|+|.++..+++.+.+ .+.+.+++.+..........+ ..+.+ +..|.+.+.++++ +.|+|+...+
T Consensus 18 kilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~-~~~~~-------d~~d~~~l~~~~~--~~DvVi~~~p 86 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFA-TPLKV-------DASNFDKLVEVMK--EFELVIGALP 86 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTS-EEEEC-------CTTCHHHHHHHHT--TCSEEEECCC
T ss_pred EEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccC-CcEEE-------ecCCHHHHHHHHh--CCCEEEEecC
Confidence 79999999999999998876 467665543321111111111 22333 2367788888874 6799997754
Q ss_pred cccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCc
Q 041518 119 FLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPG 168 (765)
Q Consensus 119 ~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~ 168 (765)
.. -+..++++|.+.|..++-.+... ..-..+.+.++++|+...+.
T Consensus 87 ~~-~~~~v~~~~~~~g~~yvD~s~~~----~~~~~l~~~a~~~g~~~i~~ 131 (365)
T 3abi_A 87 GF-LGFKSIKAAIKSKVDMVDVSFMP----ENPLELRDEAEKAQVTIVFD 131 (365)
T ss_dssp GG-GHHHHHHHHHHHTCEEEECCCCS----SCGGGGHHHHHHTTCEEECC
T ss_pred Cc-ccchHHHHHHhcCcceEeeeccc----hhhhhhhhhhccCCceeeec
Confidence 32 24678999999999987322110 01122345667777766654
No 233
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=82.32 E-value=4.4 Score=42.85 Aligned_cols=76 Identities=8% Similarity=-0.109 Sum_probs=48.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCC--cccccc-------cEEEEcCCCCcCcCCCCHHHHHHHHH
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDS--LHVKSA-------DEAIRIGPPPARLSYLNGSSIVDAAI 106 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~--~~~~~a-------D~~~~i~~~~~~~syld~~~Il~~a~ 106 (765)
|++|||+| .|.++..+++.+.+.|++++++..+..... ....+. .....+ .-+..|.+.+.++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~Dl~d~~~~~~~~~ 75 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH-----YGDLSDTSNLTRILR 75 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEEC-----CCCSSCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEE-----ECCCCCHHHHHHHHH
Confidence 47999999 589999999999999999888764432210 000110 111111 124567788888888
Q ss_pred HhCCCEEEeCC
Q 041518 107 RTGAQAIHPGY 117 (765)
Q Consensus 107 ~~~~DaV~pg~ 117 (765)
..++|.|+-.-
T Consensus 76 ~~~~d~vih~A 86 (372)
T 1db3_A 76 EVQPDEVYNLG 86 (372)
T ss_dssp HHCCSEEEECC
T ss_pred hcCCCEEEECC
Confidence 77899888553
No 234
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=82.24 E-value=5.4 Score=42.18 Aligned_cols=74 Identities=11% Similarity=0.009 Sum_probs=47.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHH--CCCeEEEEecCCCCC----------Cccccccc---EEEEcCCCCcCcCCCCHHH
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKR--LGIRTVAVYSDADRD----------SLHVKSAD---EAIRIGPPPARLSYLNGSS 100 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~--~Gi~vvav~s~~d~~----------~~~~~~aD---~~~~i~~~~~~~syld~~~ 100 (765)
+++|||.| .|.++..+++.+.+ .|++++++....... ........ ..+.. +..+.+.
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~ 82 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA-------DINNPLD 82 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC-------CTTCHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEEC-------CCCCHHH
Confidence 57999998 58999999999999 999999887543310 00111111 22322 3466666
Q ss_pred HHHHHHHhCCCEEEeCCC
Q 041518 101 IVDAAIRTGAQAIHPGYG 118 (765)
Q Consensus 101 Il~~a~~~~~DaV~pg~g 118 (765)
+.++ ...++|.|+-.-+
T Consensus 83 ~~~~-~~~~~D~vih~A~ 99 (362)
T 3sxp_A 83 LRRL-EKLHFDYLFHQAA 99 (362)
T ss_dssp HHHH-TTSCCSEEEECCC
T ss_pred HHHh-hccCCCEEEECCc
Confidence 6665 4468999885543
No 235
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=81.83 E-value=1.2 Score=43.45 Aligned_cols=45 Identities=20% Similarity=0.282 Sum_probs=38.5
Q ss_pred EEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccC
Q 041518 663 VLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVS 709 (765)
Q Consensus 663 ~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~ 709 (765)
++|++|+.|++||.|++. .+-..+|.+..+|+|.-..+.+|.++.
T Consensus 64 L~V~dG~~V~~G~~laew--Dp~t~pIisE~~G~V~f~dii~G~t~~ 108 (190)
T 2auk_A 64 LAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVRFTDMIDGQTIT 108 (190)
T ss_dssp ESSCTTCEECTTCEEEEC--CSSEEEEECSSCEEEEEESCCBTTTEE
T ss_pred EEecCCCEEcCCCEEEEE--cCcCCcEEeccccEEEEEeccCCcceE
Confidence 689999999999999976 478899999999999988777775543
No 236
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=81.72 E-value=2.9 Score=44.69 Aligned_cols=75 Identities=8% Similarity=0.038 Sum_probs=47.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCC-CeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLG-IRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~G-i~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+++|||+| .|.++..+++.+.+.| ++++++...................+. -+..|.+.+.++++ ++|+|+
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~-----~Dl~d~~~l~~~~~--~~d~Vi 104 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSE-----TSITDDALLASLQD--EYDYVF 104 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEEC-----SCTTCHHHHHHCCS--CCSEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEE-----CCCCCHHHHHHHhh--CCCEEE
Confidence 46999999 5899999999999999 999887654332111111011111111 24466666666553 899988
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-.-+
T Consensus 105 h~A~ 108 (377)
T 2q1s_A 105 HLAT 108 (377)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6543
No 237
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=81.69 E-value=1.6 Score=53.91 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=25.6
Q ss_pred EEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEE
Q 041518 662 KVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVH 698 (765)
Q Consensus 662 ~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~ 698 (765)
.++|++||.|++||.|+.-.. -.++|.|..+|+|.
T Consensus 1002 ~l~v~~g~~V~~g~~ia~wDp--~~~piise~~G~v~ 1036 (1407)
T 3lu0_D 1002 VLAKGDGEQVAGGETVANWDP--HTMPVITEVSGFVR 1036 (1407)
T ss_dssp EESSCSSCEECTTCEEEECCS--SCCCEECSSCEEEE
T ss_pred EEEEcCCCEecCCCEEEEEec--CceeEEeccceEEE
Confidence 357899999999999997653 34556666666554
No 238
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=81.60 E-value=5.4 Score=41.46 Aligned_cols=76 Identities=11% Similarity=0.089 Sum_probs=50.6
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCc-cc-ccc--cEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 38 EKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSL-HV-KSA--DEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 38 kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~-~~-~~a--D~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
++|||+|+ |.++..+++.+.+.|++++++..+...... .. .+. .....+. -+..|.+.+.++++..++|.
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~~~~~~~~~d~ 78 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIH-----MDLLEFSNIIRTIEKVQPDE 78 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECC-----CCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEE-----CCCCCHHHHHHHHHhcCCCE
Confidence 68999995 899999999999999998887654332110 00 000 0111121 24567788888888778999
Q ss_pred EEeCCC
Q 041518 113 IHPGYG 118 (765)
Q Consensus 113 V~pg~g 118 (765)
|+-.-+
T Consensus 79 vih~A~ 84 (345)
T 2z1m_A 79 VYNLAA 84 (345)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 886544
No 239
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=81.27 E-value=2.1 Score=45.72 Aligned_cols=144 Identities=15% Similarity=0.117 Sum_probs=82.1
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHH-H-CCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCC
Q 041518 34 QQRIEKILIANRGEIAYRIMRTAK-R-LGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQ 111 (765)
Q Consensus 34 ~~~~kkILI~g~G~~a~~iiraar-~-~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~D 111 (765)
.||+.||.|+|.|.++...++.+. + -|++++++.. .+.. ....+++.. +. ....|.+.+.+++ ..++|
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d-~~~~-~~~~~a~~~---g~--~~~~~~~~~~ll~---~~~~D 89 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCD-IVAG-RAQAALDKY---AI--EAKDYNDYHDLIN---DKDVE 89 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEEC-SSTT-HHHHHHHHH---TC--CCEEESSHHHHHH---CTTCC
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEe-CCHH-HHHHHHHHh---CC--CCeeeCCHHHHhc---CCCCC
Confidence 334459999999999999999998 4 4888887763 3332 112222221 10 0123566666544 45799
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCcEEC-----CcHHHHHHhcCHHHHHHHHHHCCCCC-CCcc-ccCCCCHHHHHHHHH
Q 041518 112 AIHPGYGFLSESADFAQLCGDNGLTFIG-----PPVSAIRDMGDKSASKRIMGAAGVPL-VPGY-HGNEQDIDLMKSEAA 184 (765)
Q Consensus 112 aV~pg~g~lsE~~~~a~~~~~~Gl~~~G-----p~~eai~~~~DK~~~r~~l~~~Gvpv-p~~~-~~~~~s~~e~~~~~~ 184 (765)
+|+..... ..+...+..+.+.|..++. .+.+.+ ..+.+++++.|+.. --++ .........+.+.++
T Consensus 90 ~V~i~tp~-~~h~~~~~~al~aGk~Vl~EKPla~~~~e~------~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~ 162 (357)
T 3ec7_A 90 VVIITASN-EAHADVAVAALNANKYVFCEKPLAVTAADC------QRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIID 162 (357)
T ss_dssp EEEECSCG-GGHHHHHHHHHHTTCEEEEESSSCSSHHHH------HHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHH
T ss_pred EEEEcCCc-HHHHHHHHHHHHCCCCEEeecCccCCHHHH------HHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHh
Confidence 99876422 2346677778888987763 222222 23455677888866 2222 112123455556554
Q ss_pred H--hCCcEEEee
Q 041518 185 K--IGYPILIKP 194 (765)
Q Consensus 185 ~--ig~PvVVKP 194 (765)
. +|-+..+..
T Consensus 163 ~g~iG~i~~v~~ 174 (357)
T 3ec7_A 163 SGEIGQPLMVHG 174 (357)
T ss_dssp HTTTCSEEEEEE
T ss_pred cCCCCCeEEEEE
Confidence 3 777766654
No 240
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=81.20 E-value=2 Score=43.11 Aligned_cols=76 Identities=7% Similarity=-0.024 Sum_probs=45.7
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-cccc-EEEEcCCCCcCcCCCCHHHHHHHHHHh----
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KSAD-EAIRIGPPPARLSYLNGSSIVDAAIRT---- 108 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~aD-~~~~i~~~~~~~syld~~~Il~~a~~~---- 108 (765)
|.|++||.|+ |.++..+++.+.+.|+++++++.+.+...... ...+ ..+.. +..|.+.+.+++++.
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~ 73 (247)
T 3dii_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHG-------DVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEEC-------CTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEe-------eCCCHHHHHHHHHHHHHHc
Confidence 4589999994 68999999999999999888764432110000 0111 12322 235555555555432
Q ss_pred -CCCEEEeCCC
Q 041518 109 -GAQAIHPGYG 118 (765)
Q Consensus 109 -~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 74 g~id~lv~nAg 84 (247)
T 3dii_A 74 QRIDVLVNNAC 84 (247)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7898886543
No 241
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=80.83 E-value=2.2 Score=43.47 Aligned_cols=75 Identities=13% Similarity=0.079 Sum_probs=45.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-ccc-cEEEEcCCCCcCcCCCCHHHHHHHHHHh-----
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KSA-DEAIRIGPPPARLSYLNGSSIVDAAIRT----- 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~a-D~~~~i~~~~~~~syld~~~Il~~a~~~----- 108 (765)
.|++||.| .|.++..+++.+.+.|++++++..+.+...... .+. -..+.. +..|.+.+.+++++.
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~g 81 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILC-------DVTQEDDVKTLVSETIRRFG 81 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEEC-------CTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEc-------CCCCHHHHHHHHHHHHHHcC
Confidence 47899999 468999999999999999888764432110000 000 122322 235555555555432
Q ss_pred CCCEEEeCCC
Q 041518 109 GAQAIHPGYG 118 (765)
Q Consensus 109 ~~DaV~pg~g 118 (765)
++|.++..-|
T Consensus 82 ~iD~lv~nAg 91 (270)
T 1yde_A 82 RLDCVVNNAG 91 (270)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7898886543
No 242
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=80.81 E-value=5 Score=42.29 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=55.5
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHHCCCeEEEEecCCCCCC-cccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYR-IMRTAKRLGIRTVAVYSDADRDS-LHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~-iiraar~~Gi~vvav~s~~d~~~-~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
||||+++|-|..+.. +++-++++|++|.+.+....... ...+...-.+..+.. .+.+.+ .++|.|+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~--------~~~l~~----~~~d~vV 71 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFD--------AAQLDE----FKADVYV 71 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCC--------GGGGGS----CCCSEEE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCC--------HHHcCC----CCCCEEE
Confidence 589999999988885 88999999999888765433210 011111222333321 111110 3589999
Q ss_pred eCCCcccccHHHHHHHHHCCCcEEC
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFIG 139 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~G 139 (765)
...+.-.+++.+.++ .+.|+++++
T Consensus 72 ~Spgi~~~~p~~~~a-~~~gi~v~~ 95 (326)
T 3eag_A 72 IGNVAKRGMDVVEAI-LNLGLPYIS 95 (326)
T ss_dssp ECTTCCTTCHHHHHH-HHTTCCEEE
T ss_pred ECCCcCCCCHHHHHH-HHcCCcEEe
Confidence 777665566666544 678999884
No 243
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=80.63 E-value=2.5 Score=44.96 Aligned_cols=88 Identities=14% Similarity=0.164 Sum_probs=55.9
Q ss_pred CEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 38 EKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
.||.|+|.|.++...++.+++. |+++++++. .+.. ....+++.. +. ..|.+.+.+++ ..++|+|+..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d-~~~~-~~~~~~~~~---g~----~~~~~~~~~l~---~~~~D~V~i~ 73 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYS-RTED-KREKFGKRY---NC----AGDATMEALLA---REDVEMVIIT 73 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEC-SSHH-HHHHHHHHH---TC----CCCSSHHHHHH---CSSCCEEEEC
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEEC-CCHH-HHHHHHHHc---CC----CCcCCHHHHhc---CCCCCEEEEe
Confidence 4999999999999999999987 888887763 2321 111222221 11 12566666553 5679998866
Q ss_pred CCcccccHHHHHHHHHCCCcEE
Q 041518 117 YGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
... ..+...+..+.+.|.+++
T Consensus 74 tp~-~~h~~~~~~al~~gk~vl 94 (354)
T 3db2_A 74 VPN-DKHAEVIEQCARSGKHIY 94 (354)
T ss_dssp SCT-TSHHHHHHHHHHTTCEEE
T ss_pred CCh-HHHHHHHHHHHHcCCEEE
Confidence 422 223556666677787665
No 244
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=80.50 E-value=4.6 Score=43.15 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=55.1
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 38 EKILIANRGEIAYR-IMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 38 kkILI~g~G~~a~~-iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
-||.|+|.|.++.. .++++++. ++++++++. .+.. ....+++.+ +. ..-|.+.+.+++ ..++|+|+.
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~a~~~---~~---~~~~~~~~~ll~---~~~vD~V~i 74 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACD-SDLE-RARRVHRFI---SD---IPVLDNVPAMLN---QVPLDAVVM 74 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEEC-SSHH-HHGGGGGTS---CS---CCEESSHHHHHH---HSCCSEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEc-CCHH-HHHHHHHhc---CC---CcccCCHHHHhc---CCCCCEEEE
Confidence 48999999999875 78888887 788887763 2321 112233321 11 123566666554 568999986
Q ss_pred CCCcccccHHHHHHHHHCCCcEE
Q 041518 116 GYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
.... ..+..++..+.+.|.+++
T Consensus 75 ~tp~-~~H~~~~~~al~aGkhVl 96 (359)
T 3m2t_A 75 AGPP-QLHFEMGLLAMSKGVNVF 96 (359)
T ss_dssp CSCH-HHHHHHHHHHHHTTCEEE
T ss_pred cCCc-HHHHHHHHHHHHCCCeEE
Confidence 6421 123455666677888766
No 245
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=80.31 E-value=1.4 Score=47.33 Aligned_cols=75 Identities=9% Similarity=-0.047 Sum_probs=54.6
Q ss_pred cccCCCcceEEE--EEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCcceeeeec
Q 041518 651 SVLSPMAGLVVK--VLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVHIQLAVHG 728 (765)
Q Consensus 651 ~v~ap~~G~v~~--~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~~~~~~~~ 728 (765)
.|.+|..|.+.. -.++.|+.|++||+|+.+-. .+|+||.+|.+.- .. .-.|..|+.++.+-.......-+|
T Consensus 265 ~v~a~~~g~~~~~~~~~~~g~~V~~G~~La~i~d----~~v~a~~dG~~i~--~p-~p~V~~G~~~~~i~~~~~~~~~~~ 337 (350)
T 2bco_A 265 TIVRLHDDFDFMFDDNVENFTSFVHGEVFGHDGD----KPLMAKNDNEAIV--FP-NRHVAIGQRAALMVCEVKTRFEEG 337 (350)
T ss_dssp EEECCSSSEEESSCTTCCBTEECCTTCEEEEETT----EEEECSSSSCEEE--SC-CTTCCTTSEEEEEEEECCEEEETT
T ss_pred EEEcCCCCeEEeccccccCCCEeCCCCEEEEECC----EEEEeCCCCEEEE--ec-CCCCCCCcEEEEEEEEccchhccC
Confidence 477898885542 34799999999999999854 7899999998653 23 678999998888765543332233
Q ss_pred -ceee
Q 041518 729 -FVVQ 732 (765)
Q Consensus 729 -~~~~ 732 (765)
.||.
T Consensus 338 ~~~~~ 342 (350)
T 2bco_A 338 ELVYD 342 (350)
T ss_dssp EEEEC
T ss_pred ceEee
Confidence 4444
No 246
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=80.02 E-value=0.96 Score=44.97 Aligned_cols=89 Identities=13% Similarity=0.176 Sum_probs=57.8
Q ss_pred CCEEEEEcCcHHHHHHHHH--HHHCCCeEEEEecCCCCC-Cccc-ccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 37 IEKILIANRGEIAYRIMRT--AKRLGIRTVAVYSDADRD-SLHV-KSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iira--ar~~Gi~vvav~s~~d~~-~~~~-~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
.++++|+|.|..+..+++. .++.|++++++.. .|+. .... ....--+ ...+.+.++++++++|.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D-~dp~~kiG~~~i~GvpV-----------~~~~dL~~~v~~~~Id~ 151 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFD-LDSNDLVGKTTEDGIPV-----------YGISTINDHLIDSDIET 151 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEE-CTTSTTTTCBCTTCCBE-----------EEGGGHHHHC-CCSCCE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEe-CCchhccCceeECCeEE-----------eCHHHHHHHHHHcCCCE
Confidence 4699999999999988887 3467999888763 3443 2222 2222212 12356788888899998
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 113 IHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 113 V~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
++...-.. ....+++.|.+.|+.-+
T Consensus 152 vIIAvPs~-~aq~v~d~lv~~GIk~I 176 (212)
T 3keo_A 152 AILTVPST-EAQEVADILVKAGIKGI 176 (212)
T ss_dssp EEECSCGG-GHHHHHHHHHHHTCCEE
T ss_pred EEEecCch-hHHHHHHHHHHcCCCEE
Confidence 88664221 22467788888887654
No 247
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=79.86 E-value=5 Score=39.83 Aligned_cols=77 Identities=14% Similarity=0.171 Sum_probs=51.2
Q ss_pred CCEEEEE--cCcHHHHHHHHHHHHCCC--eEEEEecCCCCCCcccccccE----EEEcCCCCcCcCCCC----HHHHHHH
Q 041518 37 IEKILIA--NRGEIAYRIMRTAKRLGI--RTVAVYSDADRDSLHVKSADE----AIRIGPPPARLSYLN----GSSIVDA 104 (765)
Q Consensus 37 ~kkILI~--g~G~~a~~iiraar~~Gi--~vvav~s~~d~~~~~~~~aD~----~~~i~~~~~~~syld----~~~Il~~ 104 (765)
|+||+++ |.|..+..+++++.+.++ ++++|.++++.. .....|.+ .+.+++ .++.+ -+.+++.
T Consensus 1 m~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~-~~~~~A~~~gIp~~~~~~----~~~~~r~~~~~~~~~~ 75 (216)
T 2ywr_A 1 MLKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKA-YAIERCKKHNVECKVIQR----KEFPSKKEFEERMALE 75 (216)
T ss_dssp CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTC-HHHHHHHHHTCCEEECCG----GGSSSHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCh-HHHHHHHHcCCCEEEeCc----ccccchhhhhHHHHHH
Confidence 3689888 899999999999998887 888888875432 23333332 122222 23333 2567888
Q ss_pred HHHhCCCEEEe-CCC
Q 041518 105 AIRTGAQAIHP-GYG 118 (765)
Q Consensus 105 a~~~~~DaV~p-g~g 118 (765)
+++.++|.|+. +|+
T Consensus 76 l~~~~~Dliv~a~y~ 90 (216)
T 2ywr_A 76 LKKKGVELVVLAGFM 90 (216)
T ss_dssp HHHTTCCEEEESSCC
T ss_pred HHhcCCCEEEEeCch
Confidence 88899998775 454
No 248
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=79.83 E-value=9.9 Score=38.54 Aligned_cols=71 Identities=15% Similarity=0.120 Sum_probs=48.0
Q ss_pred EEEEEc-CcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 39 KILIAN-RGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 39 kILI~g-~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
||||+| .|.++..+++.+.+. |++++++..+++........--+.+. -++.|.+.+.++++ ++|.|+-.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~-------~D~~d~~~l~~~~~--~~d~vi~~ 72 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQ-------LDYFNQESMVEAFK--GMDTVVFI 72 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEE-------CCTTCHHHHHHHTT--TCSEEEEC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEE-------cCCCCHHHHHHHHh--CCCEEEEe
Confidence 699999 589999999999998 99999887654432211111112232 24577787777764 78998865
Q ss_pred CC
Q 041518 117 YG 118 (765)
Q Consensus 117 ~g 118 (765)
.+
T Consensus 73 a~ 74 (289)
T 3e48_A 73 PS 74 (289)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 249
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=79.33 E-value=3.6 Score=42.64 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=28.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
.|++||.|+ |.++..+++.+.+.|+++++++.+.
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 75 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSP 75 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 478999994 6899999999999999988876543
No 250
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=79.24 E-value=1.9 Score=44.09 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=30.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDAD 71 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d 71 (765)
++||||+|.|.++..+++.+.+.|++++++..+..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 46899999999999999999999999998876544
No 251
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=79.03 E-value=3.3 Score=42.20 Aligned_cols=76 Identities=16% Similarity=0.097 Sum_probs=45.9
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-----C
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT-----G 109 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-----~ 109 (765)
|.|++||.|+ |.++..+++.+.+.|+++++++.+.+.........-..+.. +..|.+.+.+++++. +
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~g~ 87 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQV-------DVTDKYTFDTAITRAEKIYGP 87 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEEC-------CTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEe-------cCCCHHHHHHHHHHHHHHCCC
Confidence 4578999994 68999999999999999988765432110000001112222 235555555555432 7
Q ss_pred CCEEEeCCC
Q 041518 110 AQAIHPGYG 118 (765)
Q Consensus 110 ~DaV~pg~g 118 (765)
+|.++-.-|
T Consensus 88 iD~lvnnAg 96 (266)
T 3p19_A 88 ADAIVNNAG 96 (266)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 898885543
No 252
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=78.89 E-value=3.4 Score=42.10 Aligned_cols=60 Identities=15% Similarity=0.140 Sum_probs=46.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
-++|||+| .|.++..+++.+.+.|++++++..+ . -+..|.+.+.++++..++|+|+-
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------~-------------~Dl~d~~~~~~~~~~~~~d~vih 69 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------D-------------LDITNVLAVNKFFNEKKPNVVIN 69 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------T-------------CCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------c-------------CCCCCHHHHHHHHHhcCCCEEEE
Confidence 47999999 5899999999999999998876532 0 13467778888887778999986
Q ss_pred CCC
Q 041518 116 GYG 118 (765)
Q Consensus 116 g~g 118 (765)
.-+
T Consensus 70 ~A~ 72 (292)
T 1vl0_A 70 CAA 72 (292)
T ss_dssp CCC
T ss_pred CCc
Confidence 543
No 253
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=78.80 E-value=4.6 Score=42.40 Aligned_cols=89 Identities=16% Similarity=0.025 Sum_probs=55.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
||.||.|+|.|.++...++.+++. ++++++++. .+.. ....+++.. +. . |.+.+.+++ ..++|+|+
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~~~~~---~~----~-~~~~~~~l~---~~~~D~V~ 68 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVAD-AFPA-AAEAIAGAY---GC----E-VRTIDAIEA---AADIDAVV 68 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC-SSHH-HHHHHHHHT---TC----E-ECCHHHHHH---CTTCCEEE
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEEC-CCHH-HHHHHHHHh---CC----C-cCCHHHHhc---CCCCCEEE
Confidence 567999999999999999999986 888887753 2321 112222221 11 1 456565543 45789998
Q ss_pred eCCCcccccHHHHHHHHHCCCcEE
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
..... ..+...+..+.+.|..++
T Consensus 69 i~tp~-~~h~~~~~~al~~gk~v~ 91 (331)
T 4hkt_A 69 ICTPT-DTHADLIERFARAGKAIF 91 (331)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred EeCCc-hhHHHHHHHHHHcCCcEE
Confidence 66421 223556666777787766
No 254
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=78.73 E-value=3 Score=46.49 Aligned_cols=90 Identities=10% Similarity=0.082 Sum_probs=54.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCccccccc----EEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSAD----EAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD----~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
.+++|||+|.|.++..+++.+.+. |++++++..+.+. ...+++ ..+.+ ++.+.+.+.++++ ++
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~k---a~~la~~~~~~~~~~-------D~~d~~~l~~~l~--~~ 89 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLAN---AQALAKPSGSKAISL-------DVTDDSALDKVLA--DN 89 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHH---HHHHHGGGTCEEEEC-------CTTCHHHHHHHHH--TS
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHH---HHHHHHhcCCcEEEE-------ecCCHHHHHHHHc--CC
Confidence 367999999999999999999998 7776555433221 111221 12222 3355666666654 78
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 111 QAIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 111 DaV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
|+|+...+... ...+...+.+.|..++
T Consensus 90 DvVIn~tp~~~-~~~v~~a~l~~g~~vv 116 (467)
T 2axq_A 90 DVVISLIPYTF-HPNVVKSAIRTKTDVV 116 (467)
T ss_dssp SEEEECSCGGG-HHHHHHHHHHHTCEEE
T ss_pred CEEEECCchhh-hHHHHHHHHhcCCEEE
Confidence 99987754321 2345555666666655
No 255
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=78.62 E-value=5.6 Score=44.56 Aligned_cols=88 Identities=9% Similarity=0.125 Sum_probs=54.4
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIANRGEIAYR-IMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g~G~~a~~-iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
+|+|+|+|-|..+.. +++.++++|++|.+.+....+.....+...-.+..+. +.+.+ .++|.|+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~--------~~~~~------~~~d~vV~ 87 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHH--------RPENV------LDASVVVV 87 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSC--------CGGGG------TTCSEEEE
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCC--------CHHHc------CCCCEEEE
Confidence 689999998888775 7999999999987755332211111111122233331 11111 35899998
Q ss_pred CCCcccccHHHHHHHHHCCCcEEC
Q 041518 116 GYGFLSESADFAQLCGDNGLTFIG 139 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~G 139 (765)
..+.-..++.+..+ .+.|+++++
T Consensus 88 Spgi~~~~p~~~~a-~~~gi~v~~ 110 (494)
T 4hv4_A 88 STAISADNPEIVAA-REARIPVIR 110 (494)
T ss_dssp CTTSCTTCHHHHHH-HHTTCCEEE
T ss_pred CCCCCCCCHHHHHH-HHCCCCEEc
Confidence 77665566766544 578999884
No 256
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=78.59 E-value=5.6 Score=41.78 Aligned_cols=73 Identities=16% Similarity=0.126 Sum_probs=47.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-c---------cc-EEEEcCCCCcCcCCCCHHHHHHH
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-S---------AD-EAIRIGPPPARLSYLNGSSIVDA 104 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~---------aD-~~~~i~~~~~~~syld~~~Il~~ 104 (765)
+++|||+|+ |.++..+++.+.+.|++++++............ + .. +.+.. +..|.+.+.++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~ 99 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG-------DIRNLDDCNNA 99 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEEC-------CTTSHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEEC-------CCCCHHHHHHH
Confidence 579999995 899999999999999998887654322100000 0 11 12222 34666777776
Q ss_pred HHHhCCCEEEeCCC
Q 041518 105 AIRTGAQAIHPGYG 118 (765)
Q Consensus 105 a~~~~~DaV~pg~g 118 (765)
++ ++|+|+-.-+
T Consensus 100 ~~--~~d~vih~A~ 111 (352)
T 1sb8_A 100 CA--GVDYVLHQAA 111 (352)
T ss_dssp HT--TCSEEEECCS
T ss_pred hc--CCCEEEECCc
Confidence 64 8999886544
No 257
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=78.23 E-value=12 Score=37.70 Aligned_cols=70 Identities=13% Similarity=0.158 Sum_probs=45.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-----CC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT-----GA 110 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-----~~ 110 (765)
.|++||.| .|.++..+++.+.+.|++++++..+.+.... -..+.. +..|.+.+.+++++. ++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~-------Dl~d~~~v~~~~~~~~~~~g~i 88 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----FLAVKC-------DITDTEQVEQAYKEIEETHGPV 88 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----SEEEEC-------CTTSHHHHHHHHHHHHHHTCSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-----ceEEEe-------cCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999 5689999999999999998887755433211 122332 235555555554432 58
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.++..-|
T Consensus 89 D~lv~nAg 96 (253)
T 2nm0_A 89 EVLIANAG 96 (253)
T ss_dssp SEEEEECS
T ss_pred CEEEECCC
Confidence 98885433
No 258
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=77.88 E-value=0.45 Score=52.59 Aligned_cols=34 Identities=32% Similarity=0.548 Sum_probs=0.0
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEEec
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAM 683 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eam 683 (765)
..|.||..|+|.+++|++||.|..||+|++|+..
T Consensus 46 ~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~~ 79 (428)
T 3dva_I 46 VEIPSPVKGKVLEILVPEGTVATVGQTLITLDAP 79 (428)
T ss_dssp ----------------------------------
T ss_pred EEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecC
Confidence 4599999999999999999999999999999854
No 259
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=77.63 E-value=7.5 Score=39.30 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=27.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEec
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYS 68 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s 68 (765)
|.||.|+|.|.++..+++.+.+.+.+++++..
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d 34 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVIE 34 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEEe
Confidence 46899999999999999999998767776553
No 260
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=77.58 E-value=3.1 Score=41.06 Aligned_cols=73 Identities=14% Similarity=0.079 Sum_probs=47.3
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHC--CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRL--GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~--Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
++++|||+| .|.++..+++.+.+. |++++++..+++.......-. +.+.. +..|.+.+.++.+ ++|.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~-------D~~d~~~~~~~~~--~~d~ 72 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEA-DVFIG-------DITDADSINPAFQ--GIDA 72 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCT-TEEEC-------CTTSHHHHHHHHT--TCSE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCe-eEEEe-------cCCCHHHHHHHHc--CCCE
Confidence 468999999 689999999999999 899888765432110000000 12222 4467777777764 6898
Q ss_pred EEeCCC
Q 041518 113 IHPGYG 118 (765)
Q Consensus 113 V~pg~g 118 (765)
|+-.-+
T Consensus 73 vi~~a~ 78 (253)
T 1xq6_A 73 LVILTS 78 (253)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 886543
No 261
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=77.35 E-value=7.4 Score=40.00 Aligned_cols=72 Identities=11% Similarity=0.094 Sum_probs=46.9
Q ss_pred EEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC
Q 041518 39 KILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY 117 (765)
Q Consensus 39 kILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~ 117 (765)
||||.|+ |.++..+++.+.+.|++++++........ ..+.+....+ .-+..|.+.+.++.++.++|.|+-.-
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~-----~~Dl~~~~~~~~~~~~~~~d~vi~~a 74 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR--ENVPKGVPFF-----RVDLRDKEGVERAFREFRPTHVSHQA 74 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG--GGSCTTCCEE-----CCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch--hhcccCeEEE-----ECCCCCHHHHHHHHHhcCCCEEEECc
Confidence 7999994 89999999999999999888753221111 1111111011 12446777787877777899988654
No 262
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=77.22 E-value=5.1 Score=42.79 Aligned_cols=87 Identities=11% Similarity=0.127 Sum_probs=56.3
Q ss_pred CEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 38 EKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
-||.|+|.|.++...++.+++. +++++++.. .+.. ....+.. .+ ...|.+.+.+++ ..++|+|+..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~--~~~~a~~---~g----~~~~~~~~~ll~---~~~~D~V~i~ 72 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFD-ILAE--KREAAAQ---KG----LKIYESYEAVLA---DEKVDAVLIA 72 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSHH--HHHHHHT---TT----CCBCSCHHHHHH---CTTCCEEEEC
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEc-CCHH--HHHHHHh---cC----CceeCCHHHHhc---CCCCCEEEEc
Confidence 4899999999999999999987 788888763 2321 1122211 11 124667666654 4679999876
Q ss_pred CCcccccHHHHHHHHHCCCcEE
Q 041518 117 YGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
... ..+..++..+.+.|..++
T Consensus 73 tp~-~~h~~~~~~al~aGkhVl 93 (359)
T 3e18_A 73 TPN-DSHKELAISALEAGKHVV 93 (359)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCc-HHHHHHHHHHHHCCCCEE
Confidence 422 223566677777888765
No 263
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=77.19 E-value=4.7 Score=41.12 Aligned_cols=64 Identities=6% Similarity=-0.006 Sum_probs=45.0
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+|++|||+| .|.++..+++.+.+.|+ .... ....+. ...-+..|.+.+.++++..++|+|+
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~~~~---------~~~~~~--~~~~D~~d~~~~~~~~~~~~~d~Vi 66 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG-------LPGE---------DWVFVS--SKDADLTDTAQTRALFEKVQPTHVI 66 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC-------CTTC---------EEEECC--TTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC-------cccc---------cccccC--ceecccCCHHHHHHHHhhcCCCEEE
Confidence 468999999 58999999999999997 0000 011111 1123567888899999888899988
Q ss_pred eCC
Q 041518 115 PGY 117 (765)
Q Consensus 115 pg~ 117 (765)
-.-
T Consensus 67 h~A 69 (319)
T 4b8w_A 67 HLA 69 (319)
T ss_dssp ECC
T ss_pred ECc
Confidence 653
No 264
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=76.91 E-value=7.5 Score=38.25 Aligned_cols=75 Identities=8% Similarity=0.116 Sum_probs=46.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCC--CeEEEEecCCCCCCccccc--cc-EEEEcCCCCcCcCCCCHHHHHHHHHHh--
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLG--IRTVAVYSDADRDSLHVKS--AD-EAIRIGPPPARLSYLNGSSIVDAAIRT-- 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~G--i~vvav~s~~d~~~~~~~~--aD-~~~~i~~~~~~~syld~~~Il~~a~~~-- 108 (765)
+|++||.| .|.++..+++.+.+.| ++++++..+.+........ .. ..+.. +..+.+.+.+++++.
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~ 75 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPL-------TVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEEC-------CTTCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEe-------ecCCHHHHHHHHHHHHH
Confidence 57999999 5689999999999999 9988887553322110000 01 12222 335555555555432
Q ss_pred -----CCCEEEeCCC
Q 041518 109 -----GAQAIHPGYG 118 (765)
Q Consensus 109 -----~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 76 ~~g~~~id~li~~Ag 90 (250)
T 1yo6_A 76 IVGSDGLSLLINNAG 90 (250)
T ss_dssp HHGGGCCCEEEECCC
T ss_pred hcCCCCCcEEEECCc
Confidence 7999886543
No 265
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=76.82 E-value=5.6 Score=40.22 Aligned_cols=32 Identities=13% Similarity=0.141 Sum_probs=26.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCe-EEEEec
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIR-TVAVYS 68 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~-vvav~s 68 (765)
.++|||+|.|.++..+++.+.+.|+. +.+++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~ 63 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF 63 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 47999999999999999999999994 444443
No 266
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=76.78 E-value=2.1 Score=50.33 Aligned_cols=36 Identities=33% Similarity=0.513 Sum_probs=32.6
Q ss_pred EEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCcc
Q 041518 687 HVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVHI 722 (765)
Q Consensus 687 ~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~~ 722 (765)
..|.||.+|+|.++.+++||.|++|++|++|+...-
T Consensus 650 ~~v~ap~~G~V~~v~V~~Gd~V~~Gq~L~~iEamKm 685 (718)
T 3bg3_A 650 GQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAMKM 685 (718)
T ss_dssp SCEECSSCEEEEEECSCTTCCBCTTCCCEEEESSSC
T ss_pred ceEeCCCCeEEEEEEeCCCCeeCCCCEEEEEecccc
Confidence 359999999999999999999999999999997543
No 267
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=76.77 E-value=4.2 Score=44.96 Aligned_cols=148 Identities=16% Similarity=0.095 Sum_probs=85.6
Q ss_pred CEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEE-------EEcCC---------CCcCcCCCCHHH
Q 041518 38 EKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEA-------IRIGP---------PPARLSYLNGSS 100 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~-------~~i~~---------~~~~~syld~~~ 100 (765)
-||.|+|.|.++..+++.+.+. |+++++|.. .+.... ...+.+. ..++. .....-|.|.+.
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D-~~~era-~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ee 101 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSA-RRLPNT-FKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDL 101 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEEC-SSTHHH-HHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEe-CCHHHH-HHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHH
Confidence 3899999999998888888765 788888863 333211 1111100 00000 000012456555
Q ss_pred HHHHHHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHH
Q 041518 101 IVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMK 180 (765)
Q Consensus 101 Il~~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~ 180 (765)
++ ....+|+|+...+...-...++..+.++|..++.-+.+.. ...-..+.++++++|+..-..+.......-++.
T Consensus 102 LL---~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~--~~eg~eL~~~A~e~Gvvl~~~~gdqp~~~~eLv 176 (446)
T 3upl_A 102 IL---SNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEAD--VTIGPYLKAQADKQGVIYSLGAGDEPSSCMELI 176 (446)
T ss_dssp HH---TCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHH--HHHHHHHHHHHHHHTCCEEECTTSHHHHHHHHH
T ss_pred Hh---cCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccC--HHHHHHHHHHHHHhCCeeeecCCcchHHHHHHH
Confidence 54 3467999996543211124567778889998884334321 223457788889999875332211001245778
Q ss_pred HHHHHhCCcEEE
Q 041518 181 SEAAKIGYPILI 192 (765)
Q Consensus 181 ~~~~~ig~PvVV 192 (765)
++++..||.++.
T Consensus 177 ~~a~~~G~~~v~ 188 (446)
T 3upl_A 177 EFVSALGYEVVS 188 (446)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHhCCCeEEE
Confidence 888999998664
No 268
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=76.76 E-value=7.3 Score=38.79 Aligned_cols=103 Identities=13% Similarity=0.097 Sum_probs=60.6
Q ss_pred EEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCCC
Q 041518 39 KILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGYG 118 (765)
Q Consensus 39 kILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~g 118 (765)
||.|+|.|.++..+++.+.+.|+++++++.. +... +. .|.+.+.+++ .++|+|+....
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~-~~~~------~~-----------~~~~~~~l~~----~~~DvVv~~~~ 59 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDV-RGEH------EK-----------MVRGIDEFLQ----REMDVAVEAAS 59 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECS-SCCC------TT-----------EESSHHHHTT----SCCSEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEec-Ccch------hh-----------hcCCHHHHhc----CCCCEEEECCC
Confidence 7999999999999999998899998777632 2211 11 1345555543 57899986642
Q ss_pred cccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCC
Q 041518 119 FLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVP 164 (765)
Q Consensus 119 ~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvp 164 (765)
.. ........+.+.|..++--++-+.....-...+.+++++.|+.
T Consensus 60 ~~-~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~ 104 (236)
T 2dc1_A 60 QQ-AVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRR 104 (236)
T ss_dssp HH-HHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCC
T ss_pred HH-HHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCe
Confidence 11 1233445556678777644432211000002445556666665
No 269
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=76.68 E-value=7.8 Score=41.40 Aligned_cols=86 Identities=13% Similarity=0.124 Sum_probs=54.4
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 38 EKILIANRGEIAYR-IMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 38 kkILI~g~G~~a~~-iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
-||.|+|.|.++.. .++.+++. +++++++.. .+... .... + + ....|.+.+.+++ ..++|+|+.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~~----~~~~-~--~---~~~~~~~~~~ll~---~~~~D~V~i 73 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVAS-RDEEK----VKRD-L--P---DVTVIASPEAAVQ---HPDVDLVVI 73 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC-SCHHH----HHHH-C--T---TSEEESCHHHHHT---CTTCSEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEc-CCHHH----HHhh-C--C---CCcEECCHHHHhc---CCCCCEEEE
Confidence 58999999999986 67778776 888887763 33311 1111 0 0 1123566666654 467999987
Q ss_pred CCCcccccHHHHHHHHHCCCcEE
Q 041518 116 GYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
.... ..+..++..+.+.|..++
T Consensus 74 ~tp~-~~H~~~~~~al~aGk~Vl 95 (364)
T 3e82_A 74 ASPN-ATHAPLARLALNAGKHVV 95 (364)
T ss_dssp CSCG-GGHHHHHHHHHHTTCEEE
T ss_pred eCCh-HHHHHHHHHHHHCCCcEE
Confidence 6421 233566777778888776
No 270
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=76.41 E-value=2.9 Score=43.67 Aligned_cols=38 Identities=11% Similarity=0.100 Sum_probs=29.5
Q ss_pred CcCCCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 33 KQQRIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 33 ~~~~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
.+.|.|+|||.| .|.++..+++.+.+.|++++++..+.
T Consensus 5 ~~~~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~ 43 (338)
T 2rh8_A 5 HPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDP 43 (338)
T ss_dssp ----CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCc
Confidence 334578999999 68999999999999999988765443
No 271
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=76.30 E-value=15 Score=36.98 Aligned_cols=145 Identities=11% Similarity=0.082 Sum_probs=79.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
||-++...+|--..-.+.-|++.|++++++...-.... |.+.. . ..+.+.+...|+..++.....-
T Consensus 5 MKvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~------~s~~~-h-------~~~~e~a~~~A~~LGIpl~~v~ 70 (237)
T 3rjz_A 5 ADVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENE------ESYMY-H-------TINANLTDLQARALGIPLVKGF 70 (237)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC----------------------CCSSSHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCC------Ccccc-C-------CccHHHHHHHHHHcCCCEEEEE
Confidence 44444445565444445567889999988754322110 11000 0 0223456667888888765432
Q ss_pred C-Cc-ccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCccccCCCCHHHHHHHHHHhCCcEEEee
Q 041518 117 Y-GF-LSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHGNEQDIDLMKSEAAKIGYPILIKP 194 (765)
Q Consensus 117 ~-g~-lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~~~~s~~e~~~~~~~ig~PvVVKP 194 (765)
. +. -.|...+.+++.+.|+..+ ...++..-.-|.+..+.+.++|+...-..- -.+.+++.+..-..||-.+|--
T Consensus 71 ~~g~~~~e~e~l~~~l~~~~i~~v--v~Gdi~s~yqr~r~e~vc~~~gl~~~~PLW--~~d~~~Ll~e~i~~G~~aiiv~ 146 (237)
T 3rjz_A 71 TQGEKEKEVEDLKRVLSGLKIQGI--VAGALASKYQRKRIEKVAKELGLEVYTPAW--GRDAKEYMRELLNLGFKIMVVG 146 (237)
T ss_dssp C------CHHHHHHHHTTSCCSEE--ECC---CCSHHHHHHHHHHHTTCEEECSSS--SCCHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCchHHHHHHHHHHHhcCCcEE--EECCcchHHHHHHHHHHHHHcCCEEEcccc--CCCHHHHHHHHHHCCCEEEEEE
Confidence 1 11 1122455666666666544 334454555577778888889886432211 2377788777778899877776
Q ss_pred cCCCC
Q 041518 195 THGGG 199 (765)
Q Consensus 195 ~~g~G 199 (765)
++..|
T Consensus 147 v~~~g 151 (237)
T 3rjz_A 147 VSAYG 151 (237)
T ss_dssp EESTT
T ss_pred EecCC
Confidence 65543
No 272
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=76.19 E-value=2.5 Score=41.12 Aligned_cols=33 Identities=12% Similarity=0.051 Sum_probs=29.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
...|+|+|+|..++.++..|.+.|++|.++...
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 346999999999999999999999998887654
No 273
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=76.18 E-value=2.9 Score=41.26 Aligned_cols=76 Identities=14% Similarity=0.038 Sum_probs=46.2
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-c-ccEEEEcCCCCcCcCCCCHHHHHHHHHHh----
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-S-ADEAIRIGPPPARLSYLNGSSIVDAAIRT---- 108 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~-aD~~~~i~~~~~~~syld~~~Il~~a~~~---- 108 (765)
|.|++||.| .|.++..+++.+.+.|++++++..+.+....... + .-..+.. +..|.+.+.+++++.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~ 76 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPG-------DVREEGDWARAVAAMEEAF 76 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEe-------cCCCHHHHHHHHHHHHHHc
Confidence 457899999 5789999999999999998887654221100000 0 0122222 235555555554432
Q ss_pred -CCCEEEeCCC
Q 041518 109 -GAQAIHPGYG 118 (765)
Q Consensus 109 -~~DaV~pg~g 118 (765)
++|.++..-|
T Consensus 77 ~~id~li~~Ag 87 (234)
T 2ehd_A 77 GELSALVNNAG 87 (234)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7898886543
No 274
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=76.02 E-value=15 Score=36.77 Aligned_cols=75 Identities=7% Similarity=0.019 Sum_probs=45.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-ccc--EEEEcCCCCcCcCCCCHHHHHHHHHHh----
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-SAD--EAIRIGPPPARLSYLNGSSIVDAAIRT---- 108 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~aD--~~~~i~~~~~~~syld~~~Il~~a~~~---- 108 (765)
-|++||.|+ +.++..+++.+.+.|+++++++.+......... +.. ..+.. +..|.+.+.+++++.
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNA-------DVTNEADATAALAFAKQEF 79 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEc-------cCCCHHHHHHHHHHHHHHc
Confidence 378999995 689999999999999999888755433211111 111 11222 335555555555432
Q ss_pred -CCCEEEeCCC
Q 041518 109 -GAQAIHPGYG 118 (765)
Q Consensus 109 -~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 80 g~id~lv~nAg 90 (257)
T 3tpc_A 80 GHVHGLVNCAG 90 (257)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7999886544
No 275
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=75.86 E-value=1.2 Score=44.52 Aligned_cols=88 Identities=15% Similarity=0.083 Sum_probs=50.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
.++++|+|.|..+..+++.+.+.|+ ++++..+++... ... .+..+..+ +..+.+.+.+ +.-.++|+|+..
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~g------d~~~~~~l~~-a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHG------DPTRVSDLEK-ANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHH-HHH-TTCEEEES------CTTCHHHHHH-TTCTTCSEEEEC
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHH-HHh-cCCeEEEc------CCCCHHHHHh-cCcchhcEEEEc
Confidence 4699999999999999999999999 887765433211 111 12122222 2344443333 323578888876
Q ss_pred CCcccccHHHHHHHHHCC
Q 041518 117 YGFLSESADFAQLCGDNG 134 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~G 134 (765)
.+....|...+..+.+.+
T Consensus 79 ~~~d~~n~~~~~~a~~~~ 96 (234)
T 2aef_A 79 LESDSETIHCILGIRKID 96 (234)
T ss_dssp CSCHHHHHHHHHHHHHHC
T ss_pred CCCcHHHHHHHHHHHHHC
Confidence 543333333444445443
No 276
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=75.84 E-value=2.7 Score=42.67 Aligned_cols=33 Identities=9% Similarity=-0.049 Sum_probs=29.8
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEec
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYS 68 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s 68 (765)
|+.+|+|+|+|..++.++..+++.|++++++..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 567999999999999999999999999888764
No 277
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=75.73 E-value=11 Score=37.67 Aligned_cols=78 Identities=18% Similarity=0.253 Sum_probs=51.2
Q ss_pred CCEEEEE--cCcHHHHHHHHHHHHC--CCeEEEEecCCCCCCcccccccE----EEEcCCCCcCcCCCC----HHHHHHH
Q 041518 37 IEKILIA--NRGEIAYRIMRTAKRL--GIRTVAVYSDADRDSLHVKSADE----AIRIGPPPARLSYLN----GSSIVDA 104 (765)
Q Consensus 37 ~kkILI~--g~G~~a~~iiraar~~--Gi~vvav~s~~d~~~~~~~~aD~----~~~i~~~~~~~syld----~~~Il~~ 104 (765)
|+||+|+ |.|..+..+++++.+. ++++++|.++.+. ......|.+ .+.+++ .+|.+ -+.+++.
T Consensus 22 ~~rI~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~-~~~~~~A~~~gIp~~~~~~----~~~~~r~~~~~~~~~~ 96 (229)
T 3auf_A 22 MIRIGVLISGSGTNLQAILDGCREGRIPGRVAVVISDRAD-AYGLERARRAGVDALHMDP----AAYPSRTAFDAALAER 96 (229)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTT-CHHHHHHHHTTCEEEECCG----GGSSSHHHHHHHHHHH
T ss_pred CcEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCc-hHHHHHHHHcCCCEEEECc----ccccchhhccHHHHHH
Confidence 4588888 8899999999999876 6788888887432 233333332 222222 23333 3568888
Q ss_pred HHHhCCCEEEe-CCCc
Q 041518 105 AIRTGAQAIHP-GYGF 119 (765)
Q Consensus 105 a~~~~~DaV~p-g~g~ 119 (765)
+++.++|.|+. +|+.
T Consensus 97 l~~~~~Dliv~agy~~ 112 (229)
T 3auf_A 97 LQAYGVDLVCLAGYMR 112 (229)
T ss_dssp HHHTTCSEEEESSCCS
T ss_pred HHhcCCCEEEEcChhH
Confidence 89999998775 4543
No 278
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=75.71 E-value=3.9 Score=45.37 Aligned_cols=89 Identities=8% Similarity=0.084 Sum_probs=52.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc-----EEEEcCCCCcCcCCCCHHHHHHHHHHhCCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSAD-----EAIRIGPPPARLSYLNGSSIVDAAIRTGAQ 111 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD-----~~~~i~~~~~~~syld~~~Il~~a~~~~~D 111 (765)
+++|||+|.|.++..+++.+.+.|++++++..+.+. ...+++ ..+.+ +..+.+.+.++++ ++|
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~---a~~la~~~~~~~~~~~-------Dv~d~~~l~~~l~--~~D 70 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLES---AKKLSAGVQHSTPISL-------DVNDDAALDAEVA--KHD 70 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHH---HHHTTTTCTTEEEEEC-------CTTCHHHHHHHHT--TSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHH---HHHHHHhcCCceEEEe-------ecCCHHHHHHHHc--CCc
Confidence 579999999999999999999999996665543211 111111 12222 2355566666553 799
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 112 AIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 112 aV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
+|+...+... +..++..+.+.|..++
T Consensus 71 vVIn~a~~~~-~~~i~~a~l~~g~~vv 96 (450)
T 1ff9_A 71 LVISLIPYTF-HATVIKSAIRQKKHVV 96 (450)
T ss_dssp EEEECCC--C-HHHHHHHHHHHTCEEE
T ss_pred EEEECCcccc-chHHHHHHHhCCCeEE
Confidence 9987654321 1334444445555554
No 279
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=75.70 E-value=8.1 Score=38.75 Aligned_cols=74 Identities=8% Similarity=0.012 Sum_probs=46.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-ccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-----C
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KSADEAIRIGPPPARLSYLNGSSIVDAAIRT-----G 109 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-----~ 109 (765)
.|++||.| .|.++..+++.+.+.|++++++..+.+. .... .+....+.. +..|.+.+.+++++. +
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQV-------DLEDERERVRFVEEAAYALGR 77 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEEC-------CTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEe-------eCCCHHHHHHHHHHHHHHcCC
Confidence 47899999 5689999999999999998887655432 1111 010133333 235555555555432 7
Q ss_pred CCEEEeCCC
Q 041518 110 AQAIHPGYG 118 (765)
Q Consensus 110 ~DaV~pg~g 118 (765)
+|.++-.-|
T Consensus 78 iD~lv~~Ag 86 (256)
T 2d1y_A 78 VDVLVNNAA 86 (256)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 898885543
No 280
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=75.67 E-value=5.2 Score=39.72 Aligned_cols=34 Identities=12% Similarity=0.011 Sum_probs=28.9
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
|.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999 5789999999999999998887644
No 281
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=75.40 E-value=17 Score=36.52 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=47.6
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-CCCEEEe
Q 041518 38 EKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT-GAQAIHP 115 (765)
Q Consensus 38 kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-~~DaV~p 115 (765)
|++||.|+ +.++..+++.+.+.|.++++++.+.+........--..+.. +..|.+.+.++.++. ++|.++-
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~g~iDiLVN 84 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREEL-------DITDSQRLQRLFEALPRLDVLVN 84 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEEC-------CTTCHHHHHHHHHHCSCCSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEe-------cCCCHHHHHHHHHhcCCCCEEEE
Confidence 79999995 47999999999999999998876655432111111112222 335667777777665 4787775
Q ss_pred C
Q 041518 116 G 116 (765)
Q Consensus 116 g 116 (765)
.
T Consensus 85 N 85 (242)
T 4b79_A 85 N 85 (242)
T ss_dssp C
T ss_pred C
Confidence 4
No 282
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=75.40 E-value=18 Score=35.89 Aligned_cols=71 Identities=8% Similarity=0.101 Sum_probs=47.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-----CC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT-----GA 110 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-----~~ 110 (765)
.|++||.| .|.++..+++.+.+.|++++++..+.+.... . -..+.. +..|.+.+.+++++. ++
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~--~--~~~~~~-------D~~d~~~~~~~~~~~~~~~g~i 75 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY--P--FATEVM-------DVADAAQVAQVCQRLLAETERL 75 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCC--S--SEEEEC-------CTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcC--C--ceEEEc-------CCCCHHHHHHHHHHHHHHcCCC
Confidence 37899999 5689999999999999999888755432111 1 122322 335666666555542 78
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.++..-|
T Consensus 76 d~lv~~Ag 83 (250)
T 2fwm_X 76 DALVNAAG 83 (250)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886543
No 283
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=75.29 E-value=13 Score=36.98 Aligned_cols=70 Identities=9% Similarity=0.104 Sum_probs=45.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-----CC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT-----GA 110 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-----~~ 110 (765)
.|++||.| .|.++..+++.+.+.|++++++..+.+.... .. .+.. +..|.+.+.+++++. ++
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~--~~~~-------D~~~~~~~~~~~~~~~~~~g~i 82 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---LF--GVEV-------DVTDSDAVDRAFTAVEEHQGPV 82 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT---SE--EEEC-------CTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---hc--Ceec-------cCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999 5689999999999999998888655433211 11 1332 235555555554432 68
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.++..-|
T Consensus 83 d~lv~~Ag 90 (247)
T 1uzm_A 83 EVLVSNAG 90 (247)
T ss_dssp SEEEEECS
T ss_pred CEEEECCC
Confidence 98886544
No 284
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=75.19 E-value=18 Score=37.91 Aligned_cols=81 Identities=15% Similarity=0.064 Sum_probs=54.6
Q ss_pred CEEEEEcCcHHHH-HHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHH-hCCCEEE
Q 041518 38 EKILIANRGEIAY-RIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIR-TGAQAIH 114 (765)
Q Consensus 38 kkILI~g~G~~a~-~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~-~~~DaV~ 114 (765)
-||.|+|.|.++. ..++++++. +++++++.+ .+..... ...|.+.+++++ . .++|+|+
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d-~~~~~~g---------------~~~~~~~~~ll~---~~~~vD~V~ 86 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKNANFKLVATAS-RHGTVEG---------------VNSYTTIEAMLD---AEPSIDAVS 86 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHCTTEEEEEEEC-SSCCCTT---------------SEEESSHHHHHH---HCTTCCEEE
T ss_pred ceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEe-CChhhcC---------------CCccCCHHHHHh---CCCCCCEEE
Confidence 3999999999997 688888886 788888764 3332110 112566666654 4 6799998
Q ss_pred eCCCcccccHHHHHHHHHCCCcEE
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
.... ...+...+..+.++|..++
T Consensus 87 i~tp-~~~H~~~~~~al~aGkhVl 109 (330)
T 4ew6_A 87 LCMP-PQYRYEAAYKALVAGKHVF 109 (330)
T ss_dssp ECSC-HHHHHHHHHHHHHTTCEEE
T ss_pred EeCC-cHHHHHHHHHHHHcCCcEE
Confidence 6642 1223566677778888777
No 285
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=75.03 E-value=0.6 Score=47.05 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=0.0
Q ss_pred CcccCCCcceEEEEEcCCCCe-ecCCCeEEEEEe
Q 041518 650 GSVLSPMAGLVVKVLANDGTK-VEEGQPILVLEA 682 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~-V~~G~~l~~~ea 682 (765)
..|.||..|+|.+++|++||. |..|++|++|+.
T Consensus 47 ~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~~ 80 (229)
T 1zy8_K 47 VTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVE 80 (229)
T ss_dssp ----------------------------------
T ss_pred eEEecCCCeEEEEEEecCCCeeecCCCEEEEEec
Confidence 568999999999999999997 999999999974
No 286
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=74.99 E-value=9.3 Score=40.48 Aligned_cols=89 Identities=11% Similarity=0.133 Sum_probs=54.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHC--CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRL--GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~--Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+.||.|+|.|.++...++.+++. ++++++++. .+.. ....+++.. +. ..|.+.+.++ .+.++|+|+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d-~~~~-~~~~~~~~~---~~----~~~~~~~~ll---~~~~~D~V~ 80 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCD-IDPA-ALKAAVERT---GA----RGHASLTDML---AQTDADIVI 80 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEEC-SSHH-HHHHHHHHH---CC----EEESCHHHHH---HHCCCSEEE
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEc-CCHH-HHHHHHHHc---CC----ceeCCHHHHh---cCCCCCEEE
Confidence 45999999999998899999987 888887763 2321 111222211 10 1245655554 356899988
Q ss_pred eCCCcccccHHHHHHHHHCCCcEE
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
...-. ..+...+..+.+.|..++
T Consensus 81 i~tp~-~~h~~~~~~al~~gk~v~ 103 (354)
T 3q2i_A 81 LTTPS-GLHPTQSIECSEAGFHVM 103 (354)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred ECCCc-HHHHHHHHHHHHCCCCEE
Confidence 66321 123455566667777665
No 287
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=74.95 E-value=4.8 Score=40.01 Aligned_cols=33 Identities=6% Similarity=0.090 Sum_probs=28.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
+|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 589999994 689999999999999998887654
No 288
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=74.92 E-value=8.2 Score=42.62 Aligned_cols=93 Identities=10% Similarity=0.065 Sum_probs=56.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-cc--ccEEEEcCCCCcCcCCCCHHHHHHHHHHhC-CCE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KS--ADEAIRIGPPPARLSYLNGSSIVDAAIRTG-AQA 112 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~--aD~~~~i~~~~~~~syld~~~Il~~a~~~~-~Da 112 (765)
.|||+|+|.|..+..+++.++++|++|.+.+.......+.. .+ ..-.+..+..+ +.++ .+ +|.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~--------~~~~-----~~~~d~ 75 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHP--------LELL-----DEDFCY 75 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCC--------GGGG-----GSCEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCCh--------HHhh-----cCCCCE
Confidence 58999999998888899999999999887665332111111 11 11223333211 1111 23 788
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcEECCcHHH
Q 041518 113 IHPGYGFLSESADFAQLCGDNGLTFIGPPVSA 144 (765)
Q Consensus 113 V~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~ea 144 (765)
|+...|.-..++.+.. ..+.|+++++ ..+.
T Consensus 76 vv~spgi~~~~p~~~~-a~~~gi~v~~-~~e~ 105 (451)
T 3lk7_A 76 MIKNPGIPYNNPMVKK-ALEKQIPVLT-EVEL 105 (451)
T ss_dssp EEECTTSCTTSHHHHH-HHHTTCCEEC-HHHH
T ss_pred EEECCcCCCCChhHHH-HHHCCCcEEe-HHHH
Confidence 9877776556666544 4677999883 3443
No 289
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=74.91 E-value=3.7 Score=43.29 Aligned_cols=91 Identities=15% Similarity=0.104 Sum_probs=55.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCC---CeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLG---IRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~G---i~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
|+-||.|+|.|.++...++.+++.+ ++++++++. +.. ....+++.. +. ...|.+.+.+++ ..++|+
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~-~~~-~a~~~a~~~---~~---~~~~~~~~~ll~---~~~vD~ 69 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR-DLS-RAKEFAQKH---DI---PKAYGSYEELAK---DPNVEV 69 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS-SHH-HHHHHHHHH---TC---SCEESSHHHHHH---CTTCCE
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC-CHH-HHHHHHHHc---CC---CcccCCHHHHhc---CCCCCE
Confidence 4569999999999999999998764 577887642 321 112222221 11 012566565543 467999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 113 IHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 113 V~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
|+...-. ..+...+..+.++|.+++
T Consensus 70 V~i~tp~-~~H~~~~~~al~~GkhVl 94 (334)
T 3ohs_X 70 AYVGTQH-PQHKAAVMLCLAAGKAVL 94 (334)
T ss_dssp EEECCCG-GGHHHHHHHHHHTTCEEE
T ss_pred EEECCCc-HHHHHHHHHHHhcCCEEE
Confidence 8876421 233566677777887766
No 290
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=74.76 E-value=6.4 Score=40.64 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=28.4
Q ss_pred CCEEEEEcCc---HHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANRG---EIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~G---~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.|++ .++..+++.+.+.|+++++++.+
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 4799999974 78999999999999998887654
No 291
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=74.35 E-value=4.5 Score=43.44 Aligned_cols=105 Identities=18% Similarity=0.213 Sum_probs=59.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCC-CcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE-
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRD-SLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH- 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~-~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~- 114 (765)
-.+++|.|+|..+..+++.++.+||++++++..++.. .....-+|+.+. .+.+..++...-..-++|+
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~~~~fp~a~~v~~----------~~p~~~~~~~~~~~~t~vvv 268 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEKHFFPDADEIIV----------DFPADFLRKFLIRPDDFVLI 268 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGCGGGCTTCSEEEE----------SCHHHHHHHSCCCTTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccccccCCCceEEec----------CCHHHHHhhcCCCCCeEEEE
Confidence 4589999999999999999999999999987654321 122334555543 2334444332111223444
Q ss_pred eCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHH
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMG 159 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~ 159 (765)
...+.-.+...+..++ +....|+| ++++|.+..++++
T Consensus 269 ~TH~h~~D~~~L~~aL-~~~~~YiG-------~iGSr~R~~rl~~ 305 (362)
T 3on5_A 269 MTHHFQKDQEILHFLL-EKELRYIG-------ILGSKERTRRLLQ 305 (362)
T ss_dssp CCSCHHHHHHHHHHHS-SSCCSEEE-------ESSCHHHHHHHHT
T ss_pred EeCCchhhHHHHHHHh-cCCCCEEE-------EeCCHHHHHHHHh
Confidence 3444333323333333 44677775 3444545544443
No 292
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=74.24 E-value=13 Score=39.37 Aligned_cols=86 Identities=16% Similarity=0.047 Sum_probs=55.2
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 38 EKILIANRGEIAYR-IMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 38 kkILI~g~G~~a~~-iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
-||.|+|.|.++.. .++.+++. +++++++.. .+... .. +. + + ...-|.|.+.+++ ..++|+|+.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d-~~~~~--~~-~~--~--~---~~~~~~~~~~ll~---~~~vD~V~i 73 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSS-SDASK--VH-AD--W--P---AIPVVSDPQMLFN---DPSIDLIVI 73 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC-SCHHH--HH-TT--C--S---SCCEESCHHHHHH---CSSCCEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEEC-CCHHH--HH-hh--C--C---CCceECCHHHHhc---CCCCCEEEE
Confidence 48999999999986 78888876 888888763 23211 11 11 0 0 1123567666654 467999987
Q ss_pred CCCcccccHHHHHHHHHCCCcEE
Q 041518 116 GYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
... ...+..++..+.++|.+++
T Consensus 74 ~tp-~~~H~~~~~~al~aGkhV~ 95 (352)
T 3kux_A 74 PTP-NDTHFPLAQSALAAGKHVV 95 (352)
T ss_dssp CSC-TTTHHHHHHHHHHTTCEEE
T ss_pred eCC-hHHHHHHHHHHHHCCCcEE
Confidence 642 1234666777788888776
No 293
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=74.20 E-value=17 Score=36.84 Aligned_cols=71 Identities=17% Similarity=0.248 Sum_probs=46.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-----CC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT-----GA 110 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-----~~ 110 (765)
-|++||.|+ +.++..+++.+.+.|++++++..+...... .+ ..+.+ +..|.+.+.+++++. ++
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~-------Dv~~~~~v~~~~~~~~~~~g~i 82 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN---VS-DHFKI-------DVTNEEEVKEAVEKTTKKYGRI 82 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT---SS-EEEEC-------CTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC---ce-eEEEe-------cCCCHHHHHHHHHHHHHHcCCC
Confidence 589999995 689999999999999999888755443211 11 23333 235556665555443 79
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.++-.-|
T Consensus 83 D~lv~nAg 90 (269)
T 3vtz_A 83 DILVNNAG 90 (269)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886543
No 294
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=74.18 E-value=6 Score=41.61 Aligned_cols=90 Identities=13% Similarity=0.022 Sum_probs=55.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
+.||.|+|.|.++...++.+++. +++++++.. .+.. ....+++.. +. ...|.+.+.+++ ..++|+|+.
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~~~~~---~~---~~~~~~~~~ll~---~~~~D~V~i 73 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIAS-RRLE-NAQKMAKEL---AI---PVAYGSYEELCK---DETIDIIYI 73 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBC-SSSH-HHHHHHHHT---TC---CCCBSSHHHHHH---CTTCSEEEE
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEe-CCHH-HHHHHHHHc---CC---CceeCCHHHHhc---CCCCCEEEE
Confidence 35999999999999999999985 778777753 2321 112223221 11 123566666543 467899886
Q ss_pred CCCcccccHHHHHHHHHCCCcEE
Q 041518 116 GYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
..-. ..+...+..+.+.|..++
T Consensus 74 ~tp~-~~h~~~~~~al~~gk~vl 95 (330)
T 3e9m_A 74 PTYN-QGHYSAAKLALSQGKPVL 95 (330)
T ss_dssp CCCG-GGHHHHHHHHHHTTCCEE
T ss_pred cCCC-HHHHHHHHHHHHCCCeEE
Confidence 6421 223555666677787665
No 295
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=74.12 E-value=4.6 Score=42.63 Aligned_cols=36 Identities=22% Similarity=0.318 Sum_probs=31.8
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRD 73 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~ 73 (765)
.||++.|..+.|+..++++.+.|+++++|.+.+|..
T Consensus 8 mrivf~Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~p 43 (318)
T 3q0i_A 8 LRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERP 43 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHTSSSEEEEEECCCC--
T ss_pred CEEEEEecCHHHHHHHHHHHHCCCcEEEEEcCCCCc
Confidence 399999999999999999999999999999987753
No 296
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=74.06 E-value=16 Score=36.73 Aligned_cols=72 Identities=10% Similarity=0.042 Sum_probs=47.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-----CC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT-----GA 110 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-----~~ 110 (765)
.|++||.|+ |.++..+++.+.+.|+++++++.+....... .-..+.. +..|.+.+.+++++. ++
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~-------Dv~d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---DIHTVAG-------DISKPETADRIVREGIERFGRI 97 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---TEEEEES-------CTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---ceEEEEc-------cCCCHHHHHHHHHHHHHHCCCC
Confidence 478999994 6899999999999999999887654332111 1122322 335556665555543 79
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.++-.-|
T Consensus 98 D~lv~nAg 105 (260)
T 3un1_A 98 DSLVNNAG 105 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886543
No 297
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=73.99 E-value=7.5 Score=40.76 Aligned_cols=90 Identities=13% Similarity=0.032 Sum_probs=54.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
+.||.|+|.|.++...++++++. +++++++... +... ...+++.. +. ...|.+.+.+++ ..++|+|+.
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~-~~~~-~~~~a~~~---~~---~~~~~~~~~ll~---~~~~D~V~i 73 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR-TLES-AQAFANKY---HL---PKAYDKLEDMLA---DESIDVIYV 73 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS-CSST-TCC---CC---CC---SCEESCHHHHHT---CTTCCEEEE
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC-CHHH-HHHHHHHc---CC---CcccCCHHHHhc---CCCCCEEEE
Confidence 35899999999998889988876 5677777532 3221 12223221 11 123566666553 457999986
Q ss_pred CCCcccccHHHHHHHHHCCCcEE
Q 041518 116 GYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
..-. ......+..+.+.|..++
T Consensus 74 ~tp~-~~h~~~~~~al~aGk~Vl 95 (329)
T 3evn_A 74 ATIN-QDHYKVAKAALLAGKHVL 95 (329)
T ss_dssp CSCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCCc-HHHHHHHHHHHHCCCeEE
Confidence 6421 233566677778887766
No 298
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=73.98 E-value=6.2 Score=41.66 Aligned_cols=90 Identities=12% Similarity=0.099 Sum_probs=57.3
Q ss_pred CCEEEEEcCcHHHHH-HHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYR-IMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~-iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
|-||.|+|.|.++.. .+.++++. +.++++|.. .+.. ....+++++ +. ...|.|.+.+++ ..++|+|+
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d-~~~~-~a~~~a~~~---g~---~~~y~d~~ell~---~~~iDaV~ 91 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIAS-RDLT-RAREMADRF---SV---PHAFGSYEEMLA---SDVIDAVY 91 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEEC-SSHH-HHHHHHHHH---TC---SEEESSHHHHHH---CSSCSEEE
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEEC-CCHH-HHHHHHHHc---CC---CeeeCCHHHHhc---CCCCCEEE
Confidence 458999999999864 67888876 788888763 3331 122233321 11 123567666654 56799998
Q ss_pred eCCCcccccHHHHHHHHHCCCcEE
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
...- -..+..++..+.++|.+++
T Consensus 92 I~tP-~~~H~~~~~~al~aGkhVl 114 (350)
T 4had_A 92 IPLP-TSQHIEWSIKAADAGKHVV 114 (350)
T ss_dssp ECSC-GGGHHHHHHHHHHTTCEEE
T ss_pred EeCC-CchhHHHHHHHHhcCCEEE
Confidence 7642 1234667777888898877
No 299
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=73.87 E-value=3.7 Score=41.02 Aligned_cols=68 Identities=15% Similarity=0.143 Sum_probs=45.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh--CCCEE
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT--GAQAI 113 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~--~~DaV 113 (765)
||++||.| .|.++..+++.+.+.|++++++..+.+.... + + .-+..+.+.+.+++++. ++|.+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----~----~-----~~Dl~~~~~v~~~~~~~~~~id~l 66 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----D----L-----STAEGRKQAIADVLAKCSKGMDGL 66 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----C----T-----TSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----c----c-----ccCCCCHHHHHHHHHHhCCCCCEE
Confidence 57999999 5689999999999999998887654332100 0 1 11234455666666554 67988
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+-.-|
T Consensus 67 v~~Ag 71 (257)
T 1fjh_A 67 VLCAG 71 (257)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86544
No 300
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=73.85 E-value=16 Score=36.86 Aligned_cols=70 Identities=10% Similarity=0.088 Sum_probs=46.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-----CC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT-----GA 110 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-----~~ 110 (765)
.|++||.| .|.++..+++.+.+.|++++++..+.+.. .+ -..+.. +..|.+.+.+++++. ++
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~--~~~~~~-------Dl~~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE---AK--YDHIEC-------DVTNPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS---CS--SEEEEC-------CTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC---Cc--eEEEEe-------cCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999 56899999999999999988876554331 01 122322 235556555555432 69
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.++-.-|
T Consensus 76 D~lv~~Ag 83 (264)
T 2dtx_A 76 SVLVNNAG 83 (264)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886543
No 301
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=73.80 E-value=3.8 Score=41.25 Aligned_cols=76 Identities=7% Similarity=0.073 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcc-c----cccc--EEEEcCCCCcCcCCCCHHHHHHHHHH
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLH-V----KSAD--EAIRIGPPPARLSYLNGSSIVDAAIR 107 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~-~----~~aD--~~~~i~~~~~~~syld~~~Il~~a~~ 107 (765)
|+|++||.|+ |.++..+++.+.+.|+++++++......... . .... ..+.. +..|.+.+.+++++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~~~~~v~~~~~~ 78 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQA-------DVTKKEDLHKIVEE 78 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEEC-------CTTSHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEe-------cCCCHHHHHHHHHH
Confidence 5789999994 6899999999999999988875432211000 0 0001 12222 33566666666554
Q ss_pred h-----CCCEEEeCCC
Q 041518 108 T-----GAQAIHPGYG 118 (765)
Q Consensus 108 ~-----~~DaV~pg~g 118 (765)
. ++|.++-.-|
T Consensus 79 ~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 79 AMSHFGKIDFLINNAG 94 (264)
T ss_dssp HHHHHSCCCEEECCCC
T ss_pred HHHHhCCCCEEEECCc
Confidence 3 7999885544
No 302
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=73.75 E-value=5.6 Score=44.59 Aligned_cols=88 Identities=13% Similarity=0.174 Sum_probs=59.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc----ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKS----ADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~----aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
-||+.|.+.+..+..+++.++++|++++.+.+.........++ .+..+.++. .|...+.+.+++.++|.
T Consensus 348 GKrv~i~g~~~~~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~~~~~~~~i~~~-------~d~~el~~~i~~~~pDL 420 (492)
T 3u7q_A 348 GKRVMLYIGGLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLLYDD-------VTGYEFEEFVKRIKPDL 420 (492)
T ss_dssp TCEEEECBSSSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHTTSCTTCEEEES-------CBHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHHhCCCCcEEEcC-------CCHHHHHHHHHhcCCcE
Confidence 3799999888888889999999999998876542111011111 111222211 46788999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 113 IHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 113 V~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
++.+. .-.....+.|+|++
T Consensus 421 ~ig~~-------~~~~ia~k~gIP~~ 439 (492)
T 3u7q_A 421 IGSGI-------KEKFIFQKMGIPFR 439 (492)
T ss_dssp EEECH-------HHHHHHHHTTCCEE
T ss_pred EEeCc-------chhHHHHHcCCCEE
Confidence 99552 22355678899987
No 303
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=73.65 E-value=2.3 Score=44.18 Aligned_cols=38 Identities=16% Similarity=0.072 Sum_probs=30.6
Q ss_pred CCcCCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 32 DKQQRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 32 ~~~~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
+..+|+++|+|+|+|..++.++..|++.|++++++...
T Consensus 17 ~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~ 54 (338)
T 3itj_A 17 RGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGM 54 (338)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 34446789999999999999999999999998887653
No 304
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=73.52 E-value=4.6 Score=42.97 Aligned_cols=89 Identities=11% Similarity=0.034 Sum_probs=53.8
Q ss_pred CCEEEEEcCcHHHH-HHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAY-RIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~-~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+.||.|+|.|.++. ..++++++. |++++++... +.. ....++++. -+ ..|.+.+.++ ...++|+|+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~-~~~-~~~~~a~~~-g~------~~~~~~~~ll---~~~~~D~V~ 94 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR-RWD-RAKRFTERF-GG------EPVEGYPALL---ERDDVDAVY 94 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES-SHH-HHHHHHHHH-CS------EEEESHHHHH---TCTTCSEEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC-CHH-HHHHHHHHc-CC------CCcCCHHHHh---cCCCCCEEE
Confidence 34899999999997 688999988 8888877642 221 112222221 01 1134444444 346789988
Q ss_pred eCCCcccccHHHHHHHHHCCCcEE
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
...-. ..+...+..+.+.|..++
T Consensus 95 i~tp~-~~h~~~~~~al~aGk~Vl 117 (350)
T 3rc1_A 95 VPLPA-VLHAEWIDRALRAGKHVL 117 (350)
T ss_dssp ECCCG-GGHHHHHHHHHHTTCEEE
T ss_pred ECCCc-HHHHHHHHHHHHCCCcEE
Confidence 66421 223556666777787765
No 305
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=73.44 E-value=8 Score=41.52 Aligned_cols=76 Identities=16% Similarity=0.164 Sum_probs=49.5
Q ss_pred CCEEEEE--cCcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 37 IEKILIA--NRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKS-ADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 37 ~kkILI~--g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
-++|||. |.|.++..+++.|+.+|.+++++..+++......++ +|..+... +....+.+.++....++|.|
T Consensus 171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~------~~~~~~~v~~~t~~~g~d~v 244 (379)
T 3iup_A 171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAA------SPTFMQDLTEALVSTGATIA 244 (379)
T ss_dssp TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETT------STTHHHHHHHHHHHHCCCEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCC------ChHHHHHHHHHhcCCCceEE
Confidence 3689999 678999999999999999988886543321111111 45544321 11224566666666799999
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+-..|
T Consensus 245 ~d~~g 249 (379)
T 3iup_A 245 FDATG 249 (379)
T ss_dssp EESCE
T ss_pred EECCC
Confidence 97654
No 306
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=73.30 E-value=7.1 Score=39.55 Aligned_cols=33 Identities=18% Similarity=0.032 Sum_probs=28.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 47999999 5689999999999999998887644
No 307
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=73.23 E-value=3.5 Score=43.70 Aligned_cols=91 Identities=11% Similarity=0.126 Sum_probs=54.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
||.||.|+|.|.++...++.+++. ++++++++. .+.. ....+++.. +. ...|.+.+.+++ ..++|+|+
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~~~~~---~~---~~~~~~~~~ll~---~~~~D~V~ 69 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAISD-VRED-RLREMKEKL---GV---EKAYKDPHELIE---DPNVDAVL 69 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEEC-SCHH-HHHHHHHHH---TC---SEEESSHHHHHH---CTTCCEEE
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEEC-CCHH-HHHHHHHHh---CC---CceeCCHHHHhc---CCCCCEEE
Confidence 456999999999999999998885 788877753 2321 111222211 10 012456555543 45789988
Q ss_pred eCCCcccccHHHHHHHHHCCCcEE
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
..... ..+...+..+.+.|..++
T Consensus 70 i~tp~-~~h~~~~~~al~~gk~v~ 92 (344)
T 3ezy_A 70 VCSST-NTHSELVIACAKAKKHVF 92 (344)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred EcCCC-cchHHHHHHHHhcCCeEE
Confidence 66422 223555666677787665
No 308
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=73.19 E-value=3.3 Score=45.37 Aligned_cols=34 Identities=9% Similarity=0.067 Sum_probs=29.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
|+++|+|+|+|..++.++..|.+.|++|.++...
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCC
Confidence 6689999999999999999999999998888654
No 309
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=73.17 E-value=10 Score=40.42 Aligned_cols=86 Identities=8% Similarity=-0.030 Sum_probs=55.2
Q ss_pred CEEEEEcCcHHHHH-HHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 38 EKILIANRGEIAYR-IMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 38 kkILI~g~G~~a~~-iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
-||.|+|.|.++.. .++.+++. +++++++.. .++.. .+..+ + ....|.+.+.+++ ..++|+|+.
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d-~~~~~----~~~~~---~---~~~~~~~~~~ll~---~~~vD~V~i 71 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVE-RSKEL----SKERY---P---QASIVRSFKELTE---DPEIDLIVV 71 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEEC-SSCCG----GGTTC---T---TSEEESCSHHHHT---CTTCCEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEc-CCHHH----HHHhC---C---CCceECCHHHHhc---CCCCCEEEE
Confidence 48999999999886 67777776 888888764 33322 22211 0 1123455566554 467999987
Q ss_pred CCCcccccHHHHHHHHHCCCcEE
Q 041518 116 GYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
..-. ..+..++..+.++|..++
T Consensus 72 ~tp~-~~H~~~~~~al~aGkhVl 93 (362)
T 3fhl_A 72 NTPD-NTHYEYAGMALEAGKNVV 93 (362)
T ss_dssp CSCG-GGHHHHHHHHHHTTCEEE
T ss_pred eCCh-HHHHHHHHHHHHCCCeEE
Confidence 6422 234667777788898776
No 310
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=72.92 E-value=2.9 Score=43.23 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=23.9
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEe
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~ 67 (765)
|++|||+| .|.++..+++.+.+.| .++++.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~ 31 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVID 31 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEE
Confidence 47899999 5899999999999999 555554
No 311
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=72.78 E-value=12 Score=40.71 Aligned_cols=93 Identities=14% Similarity=0.073 Sum_probs=56.5
Q ss_pred EEEEEcCcH---HHHHHHHHHHHCC-CeEEE-EecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHH--hCCC
Q 041518 39 KILIANRGE---IAYRIMRTAKRLG-IRTVA-VYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIR--TGAQ 111 (765)
Q Consensus 39 kILI~g~G~---~a~~iiraar~~G-i~vva-v~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~--~~~D 111 (765)
||.|+|.|. ++...+++++..+ +++++ +. +.+.. ....++.+ +-++ ...-|.+.+.+++--+. .++|
T Consensus 39 rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~-d~~~~-~a~~~a~~-~g~~---~~~~~~~~~~ll~~~~~~~~~vD 112 (417)
T 3v5n_A 39 RLGMVGGGSGAFIGAVHRIAARLDDHYELVAGAL-SSTPE-KAEASGRE-LGLD---PSRVYSDFKEMAIREAKLKNGIE 112 (417)
T ss_dssp EEEEESCC--CHHHHHHHHHHHHTSCEEEEEEEC-CSSHH-HHHHHHHH-HTCC---GGGBCSCHHHHHHHHHHCTTCCS
T ss_pred eEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEe-CCCHH-HHHHHHHH-cCCC---cccccCCHHHHHhcccccCCCCc
Confidence 899999998 8777777787776 67775 43 33332 11223322 1111 11347788888765332 5699
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 112 AIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 112 aV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
+|+...-. ..+..++..+.+.|..++
T Consensus 113 ~V~I~tp~-~~H~~~~~~al~aGkhVl 138 (417)
T 3v5n_A 113 AVAIVTPN-HVHYAAAKEFLKRGIHVI 138 (417)
T ss_dssp EEEECSCT-TSHHHHHHHHHTTTCEEE
T ss_pred EEEECCCc-HHHHHHHHHHHhCCCeEE
Confidence 99876421 234667777888898876
No 312
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=72.65 E-value=14 Score=36.83 Aligned_cols=75 Identities=8% Similarity=-0.035 Sum_probs=46.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-ccc--EEEEcCCCCcCcCCCCHHHHHHHHHHh----
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-SAD--EAIRIGPPPARLSYLNGSSIVDAAIRT---- 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~aD--~~~~i~~~~~~~syld~~~Il~~a~~~---- 108 (765)
.|++||.| .|.++..+++.+.+.|++++++..+......... +.. ..+.. +..|.+.+.+++++.
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPA-------DVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEc-------CCCCHHHHHHHHHHHHHHC
Confidence 47899999 5689999999999999999888655432111000 011 12222 335556665555432
Q ss_pred -CCCEEEeCCC
Q 041518 109 -GAQAIHPGYG 118 (765)
Q Consensus 109 -~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 85 g~id~li~~Ag 95 (265)
T 2o23_A 85 GRVDVAVNCAG 95 (265)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 7999886543
No 313
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=72.56 E-value=8.9 Score=38.90 Aligned_cols=75 Identities=16% Similarity=0.121 Sum_probs=47.6
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-ccc--EEEEcCCCCcCcCCCCHHHHHHHHHHh---
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-SAD--EAIRIGPPPARLSYLNGSSIVDAAIRT--- 108 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~aD--~~~~i~~~~~~~syld~~~Il~~a~~~--- 108 (765)
++|++||.| .|.++..+++.+.+.|++++++..+.+....... +.+ ..+.+ +..|.+.+.+++++.
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL-------DVTDGERIDVVAADVLAR 76 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEe-------eCCCHHHHHHHHHHHHHh
Confidence 358999999 4789999999999999999887654332111000 001 12222 335666666665544
Q ss_pred --CCCEEEeCC
Q 041518 109 --GAQAIHPGY 117 (765)
Q Consensus 109 --~~DaV~pg~ 117 (765)
++|.++-.-
T Consensus 77 ~g~id~lv~~A 87 (281)
T 3m1a_A 77 YGRVDVLVNNA 87 (281)
T ss_dssp HSCCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 789888553
No 314
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=72.54 E-value=2.9 Score=44.41 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=31.2
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADR 72 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~ 72 (765)
.||+++|....+..+++++.+.|+++++|.+.+|.
T Consensus 23 mrIvf~G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 57 (329)
T 2bw0_A 23 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDK 57 (329)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEEECCCC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEEeCCCc
Confidence 49999999899999999999999999999986664
No 315
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=72.52 E-value=9.5 Score=42.10 Aligned_cols=111 Identities=14% Similarity=0.032 Sum_probs=64.3
Q ss_pred EEEEEcCcHHHHHHHHHHHH----------CCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh
Q 041518 39 KILIANRGEIAYRIMRTAKR----------LGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT 108 (765)
Q Consensus 39 kILI~g~G~~a~~iiraar~----------~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~ 108 (765)
||.|+|-|.++..+++.+++ .+++++++... +... ....++ . ..-|.|.+.++ ...
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~-~~~~-~~~~~~------~---~~~~~d~~ell---~d~ 77 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR-NLDK-AEALAG------G---LPLTTNPFDVV---DDP 77 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS-CHHH-HHHHHT------T---CCEESCTHHHH---TCT
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC-CHHH-hhhhcc------c---CcccCCHHHHh---cCC
Confidence 89999999998877776653 46777777632 2211 111111 1 11244555554 356
Q ss_pred CCCEEEeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCC
Q 041518 109 GAQAIHPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPL 165 (765)
Q Consensus 109 ~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpv 165 (765)
.+|+|+-..+...-...+...+.+.|..++..++.. ...+=..+.++++++|+..
T Consensus 78 diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal--~a~~~~eL~~~A~~~gv~l 132 (444)
T 3mtj_A 78 EIDIVVELIGGLEPARELVMQAIANGKHVVTANKHL--VAKYGNEIFAAAQAKGVMV 132 (444)
T ss_dssp TCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHH--HHHHHHHHHHHHHHHTCCE
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCccc--CHHHHHHHHHHHHHhCCeE
Confidence 789998664422223566777888999988766632 2222234455555666543
No 316
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=72.37 E-value=9.2 Score=38.39 Aligned_cols=75 Identities=16% Similarity=0.146 Sum_probs=45.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-ccc--cEEEEcCCCCcCcCCCCHHHHHHHHHHh----
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KSA--DEAIRIGPPPARLSYLNGSSIVDAAIRT---- 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~a--D~~~~i~~~~~~~syld~~~Il~~a~~~---- 108 (765)
.|++||.| .|.++..+++.+.+.|+++++++.+........ .+. -..+.. +..|.+.+.+++++.
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEV-------DVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEE-------eCCCHHHHHHHHHHHHHHc
Confidence 37999999 568999999999999999888764432110000 000 112222 335556665555432
Q ss_pred -CCCEEEeCCC
Q 041518 109 -GAQAIHPGYG 118 (765)
Q Consensus 109 -~~DaV~pg~g 118 (765)
++|.++..-|
T Consensus 85 g~iD~lv~~Ag 95 (263)
T 3ak4_A 85 GGFDLLCANAG 95 (263)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7998886543
No 317
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=72.07 E-value=6.3 Score=41.51 Aligned_cols=36 Identities=17% Similarity=0.341 Sum_probs=33.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADR 72 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~ 72 (765)
|.||++.|..+.|+..++++.+.|+++++|.+.+|.
T Consensus 4 mmrIvf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~ 39 (317)
T 3rfo_A 4 MIKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDR 39 (317)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred ceEEEEEeCCHHHHHHHHHHHHCCCcEEEEEeCCCc
Confidence 359999999999999999999999999999998776
No 318
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=71.78 E-value=7 Score=38.97 Aligned_cols=33 Identities=12% Similarity=0.168 Sum_probs=28.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999998887644
No 319
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=71.71 E-value=5.3 Score=40.47 Aligned_cols=34 Identities=12% Similarity=0.077 Sum_probs=28.9
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
|.|++||.|+ +.++..+++.+.+.|.++++++.+
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5689999995 579999999999999999888754
No 320
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=71.59 E-value=3.9 Score=44.45 Aligned_cols=35 Identities=9% Similarity=0.155 Sum_probs=28.9
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCe--EEEEecCC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIR--TVAVYSDA 70 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~--vvav~s~~ 70 (765)
|+++|+|+|+|..++..++.+++.|++ ++++..++
T Consensus 1 M~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 567999999999999999999999987 77766543
No 321
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=71.44 E-value=14 Score=36.35 Aligned_cols=36 Identities=17% Similarity=0.313 Sum_probs=29.9
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADR 72 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~ 72 (765)
.|++||.| .|.++..+++.+.+.|++++++..+...
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~ 39 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND 39 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 36899999 5689999999999999998888765443
No 322
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=71.39 E-value=9.6 Score=43.13 Aligned_cols=32 Identities=13% Similarity=0.088 Sum_probs=28.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEec
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYS 68 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s 68 (765)
-||+.|.+.+..+..+++.++++|++++.+.+
T Consensus 335 GKrv~i~~~~~~~~~l~~~l~ElGm~vv~~~t 366 (533)
T 1mio_A 335 GKTACLYVGGSRSHTYMNMLKSFGVDSLVAGF 366 (533)
T ss_dssp TCEEEEEESSSHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHCCCEEEEEEe
Confidence 37999999888888999999999999998864
No 323
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=71.35 E-value=4.7 Score=40.51 Aligned_cols=87 Identities=7% Similarity=0.024 Sum_probs=54.3
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHH-hCCCEEEeC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIR-TGAQAIHPG 116 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~-~~~DaV~pg 116 (765)
.||.|+|.|.++..+++.+++.|++++.++.. ....-|| .+.+++ .....+++-+.. .+.+.++..
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~-----~~~~~aD-ilavP~-------~ai~~vl~~l~~~l~~g~ivvd 73 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP-----EDIRDFE-LVVIDA-------HGVEGYVEKLSAFARRGQMFLH 73 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG-----GGGGGCS-EEEECS-------SCHHHHHHHHHTTCCTTCEEEE
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH-----HHhccCC-EEEEcH-------HHHHHHHHHHHHhcCCCCEEEE
Confidence 48999999999999999999999997776542 1245688 777755 234555544432 244544432
Q ss_pred -CCcccccHHHHHHHHHCCCcEEC
Q 041518 117 -YGFLSESADFAQLCGDNGLTFIG 139 (765)
Q Consensus 117 -~g~lsE~~~~a~~~~~~Gl~~~G 139 (765)
.|... ..+.+.....|..|+|
T Consensus 74 ~sgs~~--~~vl~~~~~~g~~fvg 95 (232)
T 3dfu_A 74 TSLTHG--ITVMDPLETSGGIVMS 95 (232)
T ss_dssp CCSSCC--GGGGHHHHHTTCEEEE
T ss_pred ECCcCH--HHHHHHHHhCCCcEEE
Confidence 34333 2233344467877664
No 324
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=71.31 E-value=3.4 Score=43.12 Aligned_cols=95 Identities=15% Similarity=0.066 Sum_probs=52.4
Q ss_pred CCCCCcCCCCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHH
Q 041518 29 KSDDKQQRIEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIR 107 (765)
Q Consensus 29 ~~~~~~~~~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~ 107 (765)
|+.|..+++.||.|+|.|.++...++.+++. ++++++++.. +.. ....+++. +. .|.+.+.++ ..
T Consensus 2 m~~p~~~~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~-~~~-~~~~~~~~-~~--------~~~~~~~~l---~~ 67 (315)
T 3c1a_A 2 MSIPANNSPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS-NPD-NLALVPPG-CV--------IESDWRSVV---SA 67 (315)
T ss_dssp -------CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES-CHH-HHTTCCTT-CE--------EESSTHHHH---TC
T ss_pred CCCCCCCCcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC-CHH-HHHHHHhh-Cc--------ccCCHHHHh---hC
Confidence 3444333446999999999988889999886 7887777542 221 11122222 10 134444443 33
Q ss_pred hCCCEEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 108 TGAQAIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 108 ~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
.++|+|+..... ..+..++..+.+.|..++
T Consensus 68 ~~~D~V~i~tp~-~~h~~~~~~al~~Gk~v~ 97 (315)
T 3c1a_A 68 PEVEAVIIATPP-ATHAEITLAAIASGKAVL 97 (315)
T ss_dssp TTCCEEEEESCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEeCCh-HHHHHHHHHHHHCCCcEE
Confidence 578998866421 123455666667787655
No 325
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=71.30 E-value=4.5 Score=43.51 Aligned_cols=115 Identities=11% Similarity=0.017 Sum_probs=69.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccE--EEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADE--AIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~--~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
.+||+|+|.|.++..+++.+.+. +++.+.+.+.+. ...+++. ...+ +..+.+.+.++++ ++|+|+
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~---a~~la~~~~~~~~-------d~~~~~~l~~ll~--~~DvVI 82 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNEN---LEKVKEFATPLKV-------DASNFDKLVEVMK--EFELVI 82 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHH---HHHHTTTSEEEEC-------CTTCHHHHHHHHT--TCSCEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHH---HHHHHhhCCeEEE-------ecCCHHHHHHHHh--CCCEEE
Confidence 47999999999999999999888 776554433221 1122222 1222 2345667777664 689998
Q ss_pred eCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCcc
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGY 169 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~ 169 (765)
....+. -+..++..|.+.|..++-.+.. ..+=..+.+.++++|+...++.
T Consensus 83 n~~P~~-~~~~v~~a~l~~G~~~vD~s~~----~~~~~~l~~~Ak~aG~~~l~g~ 132 (365)
T 2z2v_A 83 GALPGF-LGFKSIKAAIKSKVDMVDVSFM----PENPLELRDEAEKAQVTIVFDA 132 (365)
T ss_dssp ECCCHH-HHHHHHHHHHHTTCCEEECCCC----SSCGGGGHHHHHHTTCEEECSC
T ss_pred ECCChh-hhHHHHHHHHHhCCeEEEccCC----cHHHHHHHHHHHHcCCEEEECC
Confidence 763221 2345678888899887732221 0111245567778888776654
No 326
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=71.20 E-value=9 Score=38.97 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=28.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 37899999 5689999999999999998887644
No 327
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=71.10 E-value=6.1 Score=38.14 Aligned_cols=56 Identities=23% Similarity=0.066 Sum_probs=40.8
Q ss_pred CcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEe
Q 041518 650 GSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQA 719 (765)
Q Consensus 650 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~ 719 (765)
..|.|+..|+|+.+- |. .++|+--.-...+.+.. .++.|++||.|++|++|..+..
T Consensus 49 tpV~A~~~G~V~~~~---------G~-~V~I~H~~g~~t~Y~HL----~~i~V~~G~~V~~Gq~IG~vG~ 104 (182)
T 3it5_A 49 YSVVAAHAGTVRVLS---------RC-QVRVTHPSGWATNYYHM----DQIQVSNGQQVSADTKLGVYAG 104 (182)
T ss_dssp CEEECSSSEEEEEEE---------TT-EEEEECTTSEEEEEESE----ESCCCCTTCEECTTCEEEEECS
T ss_pred CEEEeccCEEEEEEC---------Ce-EEEEEECCcEEEEEEcC----CccccCCCCEEcCCCEEEeecC
Confidence 679999999999874 33 44555444344444443 3567999999999999999975
No 328
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=70.96 E-value=9.1 Score=40.51 Aligned_cols=92 Identities=11% Similarity=-0.037 Sum_probs=56.7
Q ss_pred CCCEEEEEcCcHHHH-HHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 36 RIEKILIANRGEIAY-RIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 36 ~~kkILI~g~G~~a~-~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
|+-||.|+|.|.++. ..++.+++. ++++++|.+. + ....+++.. .++. ...|.+.+.+++ ..++|+|
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~-~---~~~~~a~~~-~~~~---~~~~~~~~~ll~---~~~~D~V 69 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDL-H---VNEKAAAPF-KEKG---VNFTADLNELLT---DPEIELI 69 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECT-T---CCHHHHHHH-HTTT---CEEESCTHHHHS---CTTCCEE
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECC-C---HHHHHHHhh-CCCC---CeEECCHHHHhc---CCCCCEE
Confidence 456999999999987 567777765 8898888753 3 122333221 0010 112455566654 4579999
Q ss_pred EeCCCcccccHHHHHHHHHCCCcEEC
Q 041518 114 HPGYGFLSESADFAQLCGDNGLTFIG 139 (765)
Q Consensus 114 ~pg~g~lsE~~~~a~~~~~~Gl~~~G 139 (765)
+..... ..+..++..+.+.|.+++.
T Consensus 70 ~i~tp~-~~h~~~~~~al~aGk~Vl~ 94 (349)
T 3i23_A 70 TICTPA-HTHYDLAKQAILAGKSVIV 94 (349)
T ss_dssp EECSCG-GGHHHHHHHHHHTTCEEEE
T ss_pred EEeCCc-HHHHHHHHHHHHcCCEEEE
Confidence 876422 2345667777788988763
No 329
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=70.94 E-value=14 Score=41.55 Aligned_cols=86 Identities=16% Similarity=0.083 Sum_probs=57.3
Q ss_pred CCEEEEEcCcHHHHHHHHHH-HHCCCeEEEEecCCCCCCc-----ccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 37 IEKILIANRGEIAYRIMRTA-KRLGIRTVAVYSDADRDSL-----HVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraa-r~~Gi~vvav~s~~d~~~~-----~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
-||++|.|.+..+..+++.+ +++|++++.+.+....... ...+.|+.+ +. .|...+.+.+++.++
T Consensus 303 Gkrv~i~gd~~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~~~~~l~~~~~~v~-~~--------~D~~el~~~i~~~~p 373 (511)
T 2xdq_B 303 GKKAVVFGDNTHAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAGFCDEVL-IT--------DDHTVVGDAIARVEP 373 (511)
T ss_dssp TCEEEEEECHHHHHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHTTTSSEEE-EC--------CCHHHHHHHHHHHCC
T ss_pred CCEEEEEcCChHHHHHHHHHHHhCCCEEEEeecCCCCchHHHHHHHHhcCCcEE-Ee--------CCHHHHHHHHHhcCC
Confidence 37999999998999999999 8999999886543221111 112234433 21 356788999999999
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 111 QAIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 111 DaV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
|.++.+ ..-.....+.|+|++
T Consensus 374 Dl~ig~-------~~~r~~a~k~gip~~ 394 (511)
T 2xdq_B 374 AAIFGT-------QMERHVGKRLNIPCG 394 (511)
T ss_dssp SEEEEC-------HHHHHHHHHHTCCEE
T ss_pred CEEEec-------cchHHHHHhcCCCeE
Confidence 999844 122333456777765
No 330
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=70.83 E-value=7.3 Score=44.26 Aligned_cols=85 Identities=13% Similarity=-0.005 Sum_probs=57.4
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY 117 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~ 117 (765)
++++|+|.|..+..+++.+.+.|+++++++.+++..... . ..+.-++ .+ +.+++-+.-.++|+++...
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---~-~~i~gD~-------t~-~~~L~~agi~~ad~vi~~~ 416 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCND---H-VVVYGDA-------TV-GQTLRQAGIDRASGIIVTT 416 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS---S-CEEESCS-------SS-STHHHHHTTTSCSEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhc---C-CEEEeCC-------CC-HHHHHhcCccccCEEEEEC
Confidence 789999999999999999999999999999887654322 2 3443222 23 2345555567789998876
Q ss_pred CcccccHHHHHHHHHCC
Q 041518 118 GFLSESADFAQLCGDNG 134 (765)
Q Consensus 118 g~lsE~~~~a~~~~~~G 134 (765)
+...+|......+.+.|
T Consensus 417 ~~d~~ni~~~~~ak~l~ 433 (565)
T 4gx0_A 417 NDDSTNIFLTLACRHLH 433 (565)
T ss_dssp SCHHHHHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHHHHC
Confidence 64433333344444444
No 331
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=70.64 E-value=5.3 Score=39.33 Aligned_cols=35 Identities=11% Similarity=0.212 Sum_probs=29.9
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCC--eEEEEecCCC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGI--RTVAVYSDAD 71 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi--~vvav~s~~d 71 (765)
.|+|||+| .|.++..+++.+.+.|+ +++++..+++
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~ 55 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL 55 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCC
Confidence 46999999 58999999999999999 9888876544
No 332
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=70.58 E-value=3.5 Score=43.52 Aligned_cols=96 Identities=6% Similarity=-0.078 Sum_probs=56.2
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
||-||.|+|.|.++...++++ ..++++++|... +......+.++..-..+. ...-|.|.+.+++ ..++|+|+.
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~---~~~vD~V~I 73 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL-DEECSITGIAPG-VPEEDLSKLEKAISEMNI--KPKKYNNWWEMLE---KEKPDILVI 73 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECS-STTCCCHHHHHHHHTTTC--CCEECSSHHHHHH---HHCCSEEEE
T ss_pred CceEEEEEccchhHHHHHHhc-CCCcEEEEEecC-CchhhHHHHHHHHHHcCC--CCcccCCHHHHhc---CCCCCEEEE
Confidence 456999999887776777777 778999888743 221111111111000010 0123677777665 468999987
Q ss_pred CCCcccccHHHHHHHHHCCCcEEC
Q 041518 116 GYGFLSESADFAQLCGDNGLTFIG 139 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~G 139 (765)
..- ...+..++..+.++|..++.
T Consensus 74 ~tp-~~~H~~~~~~al~aGkhVl~ 96 (337)
T 3ip3_A 74 NTV-FSLNGKILLEALERKIHAFV 96 (337)
T ss_dssp CSS-HHHHHHHHHHHHHTTCEEEE
T ss_pred eCC-cchHHHHHHHHHHCCCcEEE
Confidence 632 12235567777888988773
No 333
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=70.51 E-value=0.69 Score=49.60 Aligned_cols=47 Identities=26% Similarity=0.369 Sum_probs=31.9
Q ss_pred EcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEE----------------------------EEEcCCCCccCCCCeEE
Q 041518 664 LANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVH----------------------------GLQVTAGQQVSDGSVLF 715 (765)
Q Consensus 664 ~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~----------------------------~~~~~~G~~v~~g~~l~ 715 (765)
.|++|+.|++||+|+ | +..|.|+.||+|. +++|++||.|.+|+.|.
T Consensus 124 ~v~~g~~v~~G~vla-----k-~~aiiaeidG~V~fg~~kr~i~i~~~~g~~~eylip~~~~k~~~v~~Gd~V~~G~~l~ 197 (352)
T 2xhc_A 124 GLRVGTKVKQGLPLS-----K-NEEYICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLA 197 (352)
T ss_dssp TCCTTCEECTTCBSB-----S-SSSCBCCSCEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEE
T ss_pred ecCCCCEEccCcEEe-----c-CceEEeccceEEEECCcEEEEEEECCCCCEEEEEEcCCCCcCeeeCCCCEEeCCCCcc
Confidence 378899999998877 1 3334444444443 22377899999999998
Q ss_pred E
Q 041518 716 R 716 (765)
Q Consensus 716 ~ 716 (765)
.
T Consensus 198 d 198 (352)
T 2xhc_A 198 E 198 (352)
T ss_dssp C
T ss_pred c
Confidence 4
No 334
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=70.31 E-value=11 Score=43.96 Aligned_cols=75 Identities=9% Similarity=0.034 Sum_probs=50.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-cc----cc--EEEEcCCCCcCcCCCCHHHHHHHHHHh
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KS----AD--EAIRIGPPPARLSYLNGSSIVDAAIRT 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~----aD--~~~~i~~~~~~~syld~~~Il~~a~~~ 108 (765)
+++|||+| .|.++..+++.+.+.|++++++........... .+ .. +.+.. +..+.+.+.+++++.
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~-------Dl~d~~~l~~~~~~~ 83 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEV-------DLCDRKGLEKVFKEY 83 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEEC-------CTTCHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEc-------CCCCHHHHHHHHHhC
Confidence 57999999 589999999999999999888764432211000 00 01 12222 346777888888777
Q ss_pred CCCEEEeCCC
Q 041518 109 GAQAIHPGYG 118 (765)
Q Consensus 109 ~~DaV~pg~g 118 (765)
++|+|+-.-+
T Consensus 84 ~~D~Vih~A~ 93 (699)
T 1z45_A 84 KIDSVIHFAG 93 (699)
T ss_dssp CCCEEEECCS
T ss_pred CCCEEEECCc
Confidence 8999886543
No 335
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=70.29 E-value=10 Score=38.56 Aligned_cols=61 Identities=11% Similarity=0.199 Sum_probs=45.6
Q ss_pred EEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC
Q 041518 39 KILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY 117 (765)
Q Consensus 39 kILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~ 117 (765)
||||+|+ |.++..+++.+. .|++++++..+.. .+ .-+..|.+.+.++++..++|+|+-.-
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~-------~~D~~d~~~~~~~~~~~~~d~vih~a 62 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EF-------CGDFSNPKGVAETVRKLRPDVIVNAA 62 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SS-------CCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cc-------cccCCCHHHHHHHHHhcCCCEEEECc
Confidence 7999995 899999999999 8999888754321 01 12446778888888777899988654
Q ss_pred C
Q 041518 118 G 118 (765)
Q Consensus 118 g 118 (765)
+
T Consensus 63 ~ 63 (299)
T 1n2s_A 63 A 63 (299)
T ss_dssp C
T ss_pred c
Confidence 3
No 336
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=70.27 E-value=19 Score=37.42 Aligned_cols=75 Identities=11% Similarity=0.034 Sum_probs=46.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHC--CCeEEEEecCCCCCC-ccc-ccc-cEEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRL--GIRTVAVYSDADRDS-LHV-KSA-DEAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~--Gi~vvav~s~~d~~~-~~~-~~a-D~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
|++|||+| .|.++..+++.+.+. |++++++........ ... .+. .....+. -+..|.+.+.++++ ++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~~~~~--~~ 76 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVV-----GDIADAELVDKLAA--KA 76 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEE-----CCTTCHHHHHHHHT--TC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEE-----CCCCCHHHHHHHhh--cC
Confidence 57999999 689999999999998 899888765432111 111 110 1111111 13466777777664 56
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|+|+-.-+
T Consensus 77 d~vih~A~ 84 (348)
T 1oc2_A 77 DAIVHYAA 84 (348)
T ss_dssp SEEEECCS
T ss_pred CEEEECCc
Confidence 98886544
No 337
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=70.13 E-value=6.4 Score=43.66 Aligned_cols=33 Identities=24% Similarity=0.200 Sum_probs=29.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
-++|||+|.|..|.+.++.+.+.|.++.++..+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 379999999999999999999999998887653
No 338
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=70.05 E-value=17 Score=35.86 Aligned_cols=75 Identities=12% Similarity=0.103 Sum_probs=46.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHH-h-CCCEE
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIR-T-GAQAI 113 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~-~-~~DaV 113 (765)
.|++||.| .|.++..+++.+.+.|++++++..+.+. ....+.-..+..+- .+ .+.+.+++.+.+ . ++|.+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~D~----~~-~~~~~~~~~~~~~~g~id~l 74 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQSLGAVPLPTDL----EK-DDPKGLVKRALEALGGLHVL 74 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHTCEEEECCT----TT-SCHHHHHHHHHHHHTSCCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHhhCcEEEecCC----ch-HHHHHHHHHHHHHcCCCCEE
Confidence 47999999 5689999999999999998887655332 11111112232222 22 455555554433 2 68988
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+..-|
T Consensus 75 v~~Ag 79 (239)
T 2ekp_A 75 VHAAA 79 (239)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 86543
No 339
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=69.97 E-value=6 Score=39.74 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=28.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
-|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5689999999999999998887654
No 340
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=69.82 E-value=17 Score=36.57 Aligned_cols=113 Identities=13% Similarity=0.109 Sum_probs=62.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCc---c----cccccEEEEcCCCCcCcCCCCHHHHHHHHHHhC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSL---H----VKSADEAIRIGPPPARLSYLNGSSIVDAAIRTG 109 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~---~----~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~ 109 (765)
.++|||+|.|..+..+++.+.+.|+..+.+. |.|.-.. . ....| ++. .-.+.+.+.+++.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lv-D~d~v~~sNL~Rq~l~~~~d----iG~-------~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLA-DDDDVHLSNLQRQILFTTED----IDR-------PKSQVSQQRLTQLN 95 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEE-CCCBCCGGGTTTCTTCCGGG----TTS-------BHHHHHHHHHHHHC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEE-eCCCcccccCCCCccCChhh----CCC-------HHHHHHHHHHHHHC
Confidence 4799999999999999999999999766554 2222100 0 01111 111 22455666666666
Q ss_pred CCEEEeC-CCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCC
Q 041518 110 AQAIHPG-YGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVP 167 (765)
Q Consensus 110 ~DaV~pg-~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~ 167 (765)
++.-+-. ...+.+ ..+.+.+....+.+-..+.-. .|....+.+.+.|+|..-
T Consensus 96 p~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~d~~~-----~r~~l~~~~~~~~~p~i~ 148 (251)
T 1zud_1 96 PDIQLTALQQRLTG-EALKDAVARADVVLDCTDNMA-----TRQEINAACVALNTPLIT 148 (251)
T ss_dssp TTSEEEEECSCCCH-HHHHHHHHHCSEEEECCSSHH-----HHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEeccCCH-HHHHHHHhcCCEEEECCCCHH-----HHHHHHHHHHHhCCCEEE
Confidence 5532222 122222 234455666666554433221 245556667778877543
No 341
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=69.62 E-value=13 Score=35.40 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=44.1
Q ss_pred EEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-CCCEEEeC
Q 041518 39 KILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT-GAQAIHPG 116 (765)
Q Consensus 39 kILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-~~DaV~pg 116 (765)
|+||.| .|.++..+++.+. .|++++++..+.. .+.. +..+.+.+.++.++. ++|.|+..
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~-------D~~~~~~~~~~~~~~~~~d~vi~~ 65 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTV-------DITNIDSIKKMYEQVGKVDAIVSA 65 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEEC-------CTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceee-------ecCCHHHHHHHHHHhCCCCEEEEC
Confidence 699999 5789999999999 9999888765432 1222 346677777777665 58888855
Q ss_pred CC
Q 041518 117 YG 118 (765)
Q Consensus 117 ~g 118 (765)
-|
T Consensus 66 ag 67 (202)
T 3d7l_A 66 TG 67 (202)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 342
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=69.61 E-value=8.2 Score=38.66 Aligned_cols=34 Identities=12% Similarity=0.028 Sum_probs=28.4
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
|.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN 35 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 357899999 5689999999999999998887644
No 343
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=69.55 E-value=4.6 Score=41.50 Aligned_cols=35 Identities=20% Similarity=0.152 Sum_probs=30.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
|+++|||+|+ |.++..+++.+.+.|++++++....
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence 5689999996 8999999999999999998886543
No 344
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=69.49 E-value=37 Score=37.09 Aligned_cols=87 Identities=15% Similarity=0.189 Sum_probs=54.4
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccc-cEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSA-DEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~a-D~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
|||+|+|.|..+...++.+.++|++++..++...... ...+. ...+..+. .+.+.+ + ++|.|+..
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~-~~~l~~G~~~~~g~-------~~~~~~-----~-~~d~vV~s 71 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG-LDKLPEAVERHTGS-------LNDEWL-----M-AADLIVAS 71 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT-GGGSCTTSCEEESS-------CCHHHH-----H-TCSEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch-hHHhhCCCEEEECC-------CcHHHh-----c-cCCEEEeC
Confidence 6899999999999999999999999888776543321 11111 22222221 122222 2 68999987
Q ss_pred CCcccccHHHHHHHHHCCCcEEC
Q 041518 117 YGFLSESADFAQLCGDNGLTFIG 139 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~G 139 (765)
.+.-..++.+.. ..+.|+++++
T Consensus 72 ~gi~~~~p~~~~-a~~~~~~v~~ 93 (439)
T 2x5o_A 72 PGIALAHPSLSA-AADAGIEIVG 93 (439)
T ss_dssp TTSCTTCHHHHH-HHHTTCEEEC
T ss_pred CCCCCCCHHHHH-HHHCCCcEEE
Confidence 665444554433 3467898883
No 345
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=69.34 E-value=14 Score=38.71 Aligned_cols=35 Identities=20% Similarity=0.036 Sum_probs=30.6
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCC-CeEEEEecCC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLG-IRTVAVYSDA 70 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~G-i~vvav~s~~ 70 (765)
|++||.|+|.|.++..+++.+.+.| +++++.+.++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 6789999999999999999999999 9988765543
No 346
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=69.17 E-value=20 Score=35.37 Aligned_cols=71 Identities=10% Similarity=0.133 Sum_probs=45.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHH----h---
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIR----T--- 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~----~--- 108 (765)
.|++||.| .|.++..+++.+.+.|++++++..+.+... .....+. -+..|.+.+.+++++ .
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~-----~D~~~~~~v~~~~~~~~~~~~~g 75 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVK-----MTDSFTEQADQVTAEVGKLLGDQ 75 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECC-----CCSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEE-----cCCCCHHHHHHHHHHHHHHhCCC
Confidence 47999999 568999999999999999988876544321 1112221 123444555444433 2
Q ss_pred CCCEEEeCCC
Q 041518 109 GAQAIHPGYG 118 (765)
Q Consensus 109 ~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 76 ~iD~lv~~Ag 85 (241)
T 1dhr_A 76 KVDAILCVAG 85 (241)
T ss_dssp CEEEEEECCC
T ss_pred CCCEEEEccc
Confidence 7898886544
No 347
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=69.08 E-value=6.4 Score=41.44 Aligned_cols=36 Identities=31% Similarity=0.398 Sum_probs=31.8
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRD 73 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~ 73 (765)
.||+..|..+.|+..++++.+.|+++++|.+.+|..
T Consensus 3 mrivf~Gtp~fa~~~L~~L~~~~~~v~~Vvt~pd~~ 38 (314)
T 3tqq_A 3 LKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRP 38 (314)
T ss_dssp CEEEEEECSGGGHHHHHHHHHSSSEEEEEECCCC--
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCCCc
Confidence 399999999999999999999999999999987753
No 348
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=69.03 E-value=17 Score=38.56 Aligned_cols=73 Identities=19% Similarity=0.112 Sum_probs=48.4
Q ss_pred EEEEEc-CcHHHHHHHHHHH-HCCCeEEEEecCCCCC--------Ccccc-----c-------c---cEEEEcCCCCcCc
Q 041518 39 KILIAN-RGEIAYRIMRTAK-RLGIRTVAVYSDADRD--------SLHVK-----S-------A---DEAIRIGPPPARL 93 (765)
Q Consensus 39 kILI~g-~G~~a~~iiraar-~~Gi~vvav~s~~d~~--------~~~~~-----~-------a---D~~~~i~~~~~~~ 93 (765)
+|||+| .|.++..+++.+. +.|++++++....... ..... + . -+.+..
T Consensus 4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 76 (397)
T 1gy8_A 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVG------- 76 (397)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEES-------
T ss_pred EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEEC-------
Confidence 899999 5899999999999 9999998876443321 00000 0 0 112222
Q ss_pred CCCCHHHHHHHHHHhC-CCEEEeCCC
Q 041518 94 SYLNGSSIVDAAIRTG-AQAIHPGYG 118 (765)
Q Consensus 94 syld~~~Il~~a~~~~-~DaV~pg~g 118 (765)
+..|.+.+.+++++.+ +|.|+-.-+
T Consensus 77 Dl~d~~~~~~~~~~~~~~d~vih~A~ 102 (397)
T 1gy8_A 77 DVRNEDFLNGVFTRHGPIDAVVHMCA 102 (397)
T ss_dssp CTTCHHHHHHHHHHSCCCCEEEECCC
T ss_pred CCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 3467777878777767 999886543
No 349
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=69.02 E-value=8.1 Score=39.43 Aligned_cols=32 Identities=28% Similarity=0.448 Sum_probs=27.9
Q ss_pred CEEEEEcC---cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 38 EKILIANR---GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 38 kkILI~g~---G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 68999996 589999999999999998887654
No 350
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=68.95 E-value=4.7 Score=45.15 Aligned_cols=88 Identities=13% Similarity=0.186 Sum_probs=57.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc----ccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV----KSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~----~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
-||+.|.+.+..+..+++.++++|++++.+.+......... .+.+..+.+ +-.|...+.+.+++.++|.
T Consensus 332 GKrv~i~~~~~~~~~l~~~L~ElGmevv~~gt~~~~~~d~~~~~~~l~~~~~i~-------~d~d~~el~~~i~~~~pDL 404 (483)
T 3pdi_A 332 GKRVLLYTGGVKSWSVVSALQDLGMKVVATGTKKSTEEDKARIRELMGDDVKML-------DEGNARVLLKTVDEYQADI 404 (483)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHTCEEEEECBSSSCHHHHHHHHHHSCSSCCBC-------CSCSHHHHHHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHCCCEEEEEecCCCCHHHHHHHHHhcCCCCEEE-------eCCCHHHHHHHHHhcCCCE
Confidence 37999999888788899999999999988754321100000 011111111 1146788999999999999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 113 IHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 113 V~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
++.+. .+ .....+.|+|++
T Consensus 405 ~ig~~---~~----~~~a~k~gIP~~ 423 (483)
T 3pdi_A 405 LIAGG---RN----MYTALKGRVPFL 423 (483)
T ss_dssp EECCG---GG----HHHHHHTTCCBC
T ss_pred EEECC---ch----hHHHHHcCCCEE
Confidence 99552 11 234567888876
No 351
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=68.89 E-value=3.2 Score=41.28 Aligned_cols=78 Identities=15% Similarity=0.168 Sum_probs=50.0
Q ss_pred CCCEEEEE--cCcHHHHHHHHHHHH-CCCeEEEEecCCCCCCcccccccE----EEEcCCCCcCcCCCC----HHHHHHH
Q 041518 36 RIEKILIA--NRGEIAYRIMRTAKR-LGIRTVAVYSDADRDSLHVKSADE----AIRIGPPPARLSYLN----GSSIVDA 104 (765)
Q Consensus 36 ~~kkILI~--g~G~~a~~iiraar~-~Gi~vvav~s~~d~~~~~~~~aD~----~~~i~~~~~~~syld----~~~Il~~ 104 (765)
+++||.|+ |+|.....++++++. +++++++|.++++. +....|.+ .+.++. .+|.+ -+.+++.
T Consensus 11 ~~~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~a--~~~~~A~~~gIp~~~~~~----~~~~~r~~~d~~~~~~ 84 (215)
T 3da8_A 11 APARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDREC--RAAEIAAEASVPVFTVRL----ADHPSRDAWDVAITAA 84 (215)
T ss_dssp SSEEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSCC--HHHHHHHHTTCCEEECCG----GGSSSHHHHHHHHHHH
T ss_pred CCcEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCch--HHHHHHHHcCCCEEEeCc----ccccchhhhhHHHHHH
Confidence 45688888 888988888888754 45689999998763 33334432 222211 12222 2568888
Q ss_pred HHHhCCCEEEe-CCCc
Q 041518 105 AIRTGAQAIHP-GYGF 119 (765)
Q Consensus 105 a~~~~~DaV~p-g~g~ 119 (765)
+++.++|.|+. +|+.
T Consensus 85 l~~~~~Dlivlagy~~ 100 (215)
T 3da8_A 85 TAAHEPDLVVSAGFMR 100 (215)
T ss_dssp HHTTCCSEEEEEECCS
T ss_pred HHhhCCCEEEEcCchh
Confidence 88999998775 4643
No 352
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=68.86 E-value=21 Score=36.87 Aligned_cols=73 Identities=8% Similarity=0.051 Sum_probs=47.4
Q ss_pred EEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-c----cc--EEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 39 KILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-S----AD--EAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 39 kILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~----aD--~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
+|||.| .|.++..+++.+.+.|++++++............ + .. ..+.. +..+.+.+.++++..++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~~~~~~~~~~~~~~~ 74 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEG-------DIRNEALMTEILHDHAI 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEEC-------CTTCHHHHHHHHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEc-------cCCCHHHHHHHhhccCC
Confidence 799998 5899999999999999998887532211111100 0 01 12222 34677777777777789
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.|+-.-+
T Consensus 75 D~vih~A~ 82 (338)
T 1udb_A 75 DTVIHFAG 82 (338)
T ss_dssp SEEEECCS
T ss_pred CEEEECCc
Confidence 99885543
No 353
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=68.58 E-value=7.6 Score=41.36 Aligned_cols=89 Identities=12% Similarity=0.004 Sum_probs=54.7
Q ss_pred EEEEEcCcHHHHHHHHHHHHC--------CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 39 KILIANRGEIAYRIMRTAKRL--------GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 39 kILI~g~G~~a~~iiraar~~--------Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
||.|+|.|.++..-+++++++ +.++++|.. .+... ...+++++ +. ..-|.|.+++++ +.++
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d-~~~~~-a~~~a~~~---g~---~~~y~d~~ell~---~~~i 95 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAE-ANAGL-AEARAGEF---GF---EKATADWRALIA---DPEV 95 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEEC-C--TT-HHHHHHHH---TC---SEEESCHHHHHH---CTTC
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEEC-CCHHH-HHHHHHHh---CC---CeecCCHHHHhc---CCCC
Confidence 899999999987666665543 678888863 33321 22233321 11 123567666654 5689
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCcEEC
Q 041518 111 QAIHPGYGFLSESADFAQLCGDNGLTFIG 139 (765)
Q Consensus 111 DaV~pg~g~lsE~~~~a~~~~~~Gl~~~G 139 (765)
|+|+...- -.-+...+..+.++|..++.
T Consensus 96 DaV~IatP-~~~H~~~a~~al~aGkhVl~ 123 (393)
T 4fb5_A 96 DVVSVTTP-NQFHAEMAIAALEAGKHVWC 123 (393)
T ss_dssp CEEEECSC-GGGHHHHHHHHHHTTCEEEE
T ss_pred cEEEECCC-hHHHHHHHHHHHhcCCeEEE
Confidence 99986642 12346777888888988773
No 354
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=68.38 E-value=8.9 Score=39.37 Aligned_cols=68 Identities=18% Similarity=0.112 Sum_probs=47.8
Q ss_pred EEEEEc-CcHHHHHHHHHHHHC--CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 39 KILIAN-RGEIAYRIMRTAKRL--GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 39 kILI~g-~G~~a~~iiraar~~--Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
||||+| .|.++..+++.+.+. |++++++........ . -..+.. +..|.+.+.+++++.++|+|+-
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~--~~~~~~-------D~~d~~~~~~~~~~~~~d~vih 68 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---G--IKFITL-------DVSNRDEIDRAVEKYSIDAIFH 68 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---T--CCEEEC-------CTTCHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---C--ceEEEe-------cCCCHHHHHHHHhhcCCcEEEE
Confidence 589999 588999999999988 899888764432211 0 122322 3467788888887778999986
Q ss_pred CCC
Q 041518 116 GYG 118 (765)
Q Consensus 116 g~g 118 (765)
.-+
T Consensus 69 ~a~ 71 (317)
T 3ajr_A 69 LAG 71 (317)
T ss_dssp CCC
T ss_pred CCc
Confidence 543
No 355
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=68.28 E-value=14 Score=37.49 Aligned_cols=31 Identities=16% Similarity=0.109 Sum_probs=27.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEe
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~ 67 (765)
-|++||.|+ +.++..+++.+.+.|+++++++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEc
Confidence 579999994 6899999999999999988876
No 356
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=68.23 E-value=10 Score=37.51 Aligned_cols=77 Identities=12% Similarity=0.075 Sum_probs=46.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC-CCCCCccc-cc---ccEEEEcCCCCcCcCCCCHHHHHHHHHHh--
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD-ADRDSLHV-KS---ADEAIRIGPPPARLSYLNGSSIVDAAIRT-- 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~-~d~~~~~~-~~---aD~~~~i~~~~~~~syld~~~Il~~a~~~-- 108 (765)
.|++||.| .|.++..+++.+.+.|++++++..+ .+...... .+ ......+. -+..+.+.+.+++++.
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~ 81 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA-----ADLATSEACQQLVDEFVA 81 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEE-----CCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEE-----CCCCCHHHHHHHHHHHHH
Confidence 36899999 5789999999999999998887654 22210000 00 11111111 1335666666555443
Q ss_pred ---CCCEEEeCCC
Q 041518 109 ---GAQAIHPGYG 118 (765)
Q Consensus 109 ---~~DaV~pg~g 118 (765)
++|.++..-|
T Consensus 82 ~~g~id~vi~~Ag 94 (258)
T 3afn_B 82 KFGGIDVLINNAG 94 (258)
T ss_dssp HHSSCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 7999886544
No 357
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=68.21 E-value=13 Score=36.85 Aligned_cols=75 Identities=15% Similarity=0.109 Sum_probs=46.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-cc-cc--EEEEcCCCCcCcCCCCHHHHHHHHHH----
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KS-AD--EAIRIGPPPARLSYLNGSSIVDAAIR---- 107 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~-aD--~~~~i~~~~~~~syld~~~Il~~a~~---- 107 (765)
.|++||.| .|.++..+++.+.+.|++++++..+.+...... .+ .+ ..+.. +..|.+.+.+++++
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~~ 83 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVA-------DVTDAEAMTAAAAEAEAV 83 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEEC-------CTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEE-------ecCCHHHHHHHHHHHHhh
Confidence 37899999 578999999999999999888765432110000 00 01 22322 33566666665544
Q ss_pred hCCCEEEeCCC
Q 041518 108 TGAQAIHPGYG 118 (765)
Q Consensus 108 ~~~DaV~pg~g 118 (765)
.++|.++-.-|
T Consensus 84 ~~id~li~~Ag 94 (254)
T 2wsb_A 84 APVSILVNSAG 94 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCc
Confidence 37898886543
No 358
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=68.03 E-value=5.6 Score=40.15 Aligned_cols=33 Identities=27% Similarity=0.433 Sum_probs=28.3
Q ss_pred CEEEEEcC---cHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 38 EKILIANR---GEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 38 kkILI~g~---G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
|++||.|+ |.++..+++.+.+.|+++++++.+.
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 68999996 5899999999999999988876543
No 359
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=67.88 E-value=24 Score=36.56 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=29.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
-++|.|+|-|.++..+++.++.+|+++++.+.+.
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~ 155 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSS 155 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSC
T ss_pred cchheeeccCchhHHHHHHHHhhCcEEEEEeccc
Confidence 4799999999999999999999999988765443
No 360
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=67.87 E-value=11 Score=41.74 Aligned_cols=86 Identities=7% Similarity=0.045 Sum_probs=56.3
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-------c-c--ccEEEEcCCCCcCcCCCCHHHHHHHHH
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-------K-S--ADEAIRIGPPPARLSYLNGSSIVDAAI 106 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-------~-~--aD~~~~i~~~~~~~syld~~~Il~~a~ 106 (765)
-||++|.+.+..+..+++.++++|++++.+.+..... .+. . . .+..+..+ .|...+.+.++
T Consensus 312 gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~~-~~~~~~~~ll~~~~~~~~~v~~~--------~d~~~l~~~i~ 382 (458)
T 1mio_B 312 GKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGM-KFQKEIDAMLAEAGIEGSKVKVE--------GDFFDVHQWIK 382 (458)
T ss_dssp TCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCH-HHHHHHHHHHHTTTCCSCEEEES--------CBHHHHHHHHH
T ss_pred CCEEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCCH-HHHHHHHHHHHhcCCCCCEEEEC--------CCHHHHHHHHH
Confidence 4799999999999999999999999999887654221 110 0 0 11122221 36677888888
Q ss_pred HhCCCEEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 107 RTGAQAIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 107 ~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
+.++|.++.+.. + .....+.|++++
T Consensus 383 ~~~pDl~ig~~~---~----~~~a~k~gip~~ 407 (458)
T 1mio_B 383 NEGVDLLISNTY---G----KFIAREENIPFV 407 (458)
T ss_dssp HSCCSEEEESGG---G----HHHHHHHTCCEE
T ss_pred hcCCCEEEeCcc---h----HHHHHHcCCCEE
Confidence 888998885531 1 233346677765
No 361
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=67.84 E-value=3.1 Score=41.20 Aligned_cols=85 Identities=8% Similarity=-0.003 Sum_probs=51.6
Q ss_pred CCEEEEEcCcHHHHHHHHH--HHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYRIMRT--AKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iira--ar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
.++++|+|.|..+..+++. ... |++++++..+ |+..........-+. ..+.+.+++++ ++|.|+
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~-dp~k~g~~i~gv~V~-----------~~~dl~ell~~-~ID~Vi 145 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV-DPEKVGRPVRGGVIE-----------HVDLLPQRVPG-RIEIAL 145 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES-CTTTTTCEETTEEEE-----------EGGGHHHHSTT-TCCEEE
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC-CHHHHhhhhcCCeee-----------cHHhHHHHHHc-CCCEEE
Confidence 3689999999999888874 334 8898887643 443233323332221 12346666777 899988
Q ss_pred eCCCcccccHHHHHHHHHCCCc
Q 041518 115 PGYGFLSESADFAQLCGDNGLT 136 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~ 136 (765)
...... ....++..+.+.|+.
T Consensus 146 IA~Ps~-~~~ei~~~l~~aGi~ 166 (211)
T 2dt5_A 146 LTVPRE-AAQKAADLLVAAGIK 166 (211)
T ss_dssp ECSCHH-HHHHHHHHHHHHTCC
T ss_pred EeCCch-hHHHHHHHHHHcCCC
Confidence 664221 123556666677765
No 362
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=67.80 E-value=8.6 Score=37.92 Aligned_cols=75 Identities=13% Similarity=0.073 Sum_probs=47.7
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-c-ccEEEEcCCCCcCcCCCCHHHHHHHHHHh-CCCE
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-S-ADEAIRIGPPPARLSYLNGSSIVDAAIRT-GAQA 112 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~-aD~~~~i~~~~~~~syld~~~Il~~a~~~-~~Da 112 (765)
.|++||.|+ |.++..+++.+.+.|++++++..+.+....... + ..+.+.. +..|.+.+.+++++. ++|.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCV-------DLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHTTCCCCCE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEE-------eCCCHHHHHHHHHHcCCCCE
Confidence 378999995 789999999999999998887644221100000 0 1122222 346777777777654 5898
Q ss_pred EEeCCC
Q 041518 113 IHPGYG 118 (765)
Q Consensus 113 V~pg~g 118 (765)
++-.-|
T Consensus 80 vi~~Ag 85 (244)
T 3d3w_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886543
No 363
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=67.73 E-value=12 Score=39.35 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=32.0
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADR 72 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~ 72 (765)
.||+++|.++.|...++++.+.|+++++|.+++|.
T Consensus 4 mrIvf~Gt~~fa~~~L~~L~~~~~~i~~Vvt~pd~ 38 (314)
T 1fmt_A 4 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDR 38 (314)
T ss_dssp CEEEEEECSHHHHHHHHHHHHTTCEEEEEECCCCB
T ss_pred CEEEEEecCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 48999999999999999999999999999998765
No 364
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=67.66 E-value=5.8 Score=37.18 Aligned_cols=33 Identities=9% Similarity=0.186 Sum_probs=29.5
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
.+|+|+|+|..++.++..+++.|.++.++...+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 589999999999999999999999988887543
No 365
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=67.62 E-value=5.4 Score=41.62 Aligned_cols=40 Identities=5% Similarity=0.009 Sum_probs=29.8
Q ss_pred CCCCCcCCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEec
Q 041518 29 KSDDKQQRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYS 68 (765)
Q Consensus 29 ~~~~~~~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s 68 (765)
+..+....|+||.|+|.|.++..+++.+.+.|+++++.+.
T Consensus 13 ~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 13 GLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp -----CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred ccCcccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeC
Confidence 3443444567999999999999999999999999776543
No 366
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=67.58 E-value=7.3 Score=41.13 Aligned_cols=147 Identities=14% Similarity=0.072 Sum_probs=81.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHH-H-CCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 36 RIEKILIANRGEIAYRIMRTAK-R-LGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar-~-~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
|+.||.|+|.|.++...++.++ + -|++++++.. .+.. ....++++. +. ....|.+.+.+++ ..++|+|
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d-~~~~-~~~~~~~~~---g~--~~~~~~~~~~ll~---~~~~D~V 70 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTD-VNQE-AAQKVVEQY---QL--NATVYPNDDSLLA---DENVDAV 70 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEEC-SSHH-HHHHHHHHT---TC--CCEEESSHHHHHH---CTTCCEE
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEc-CCHH-HHHHHHHHh---CC--CCeeeCCHHHHhc---CCCCCEE
Confidence 4469999999999999999998 5 4888887753 2321 111222211 10 0112456555544 4679999
Q ss_pred EeCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCC-CCcc-ccCCCCHHHHHHHHH--HhCCc
Q 041518 114 HPGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPL-VPGY-HGNEQDIDLMKSEAA--KIGYP 189 (765)
Q Consensus 114 ~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpv-p~~~-~~~~~s~~e~~~~~~--~ig~P 189 (765)
+...- -..+...+..+.+.|.+++.-.|-+.. ..+=..+.+++++.|+.. --++ .........+.+.++ .+|-+
T Consensus 71 ~i~tp-~~~h~~~~~~al~~Gk~vl~EKP~a~~-~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 148 (344)
T 3mz0_A 71 LVTSW-GPAHESSVLKAIKAQKYVFCEKPLATT-AEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEP 148 (344)
T ss_dssp EECSC-GGGHHHHHHHHHHTTCEEEECSCSCSS-HHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHHTTTTSSE
T ss_pred EECCC-chhHHHHHHHHHHCCCcEEEcCCCCCC-HHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHHcCCCCCc
Confidence 87642 123356677778889877632221110 111124456677888866 2222 112123445555554 36767
Q ss_pred EEEee
Q 041518 190 ILIKP 194 (765)
Q Consensus 190 vVVKP 194 (765)
..+.-
T Consensus 149 ~~v~~ 153 (344)
T 3mz0_A 149 LMIHC 153 (344)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 367
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=67.54 E-value=44 Score=34.33 Aligned_cols=105 Identities=19% Similarity=0.079 Sum_probs=62.1
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
..||+|+|. |.++..+++.+++.|++++.. .++... ....... .-|.+.+.+. ++..+|+++.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~-V~p~~~--g~~~~G~----------~vy~sl~el~---~~~~~D~viI 70 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGG-VTPGKG--GTTHLGL----------PVFNTVREAV---AATGATASVI 70 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEE-ECTTCT--TCEETTE----------EEESSHHHHH---HHHCCCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEE-eCCCcc--cceeCCe----------eccCCHHHHh---hcCCCCEEEE
Confidence 469999996 999999999999999985533 233321 0011111 1245555543 3457898875
Q ss_pred CCCcccccHHHHHHHHHCCCcE-E-CC---cHHHHHHhcCHHHHHHHHHHCCCC
Q 041518 116 GYGFLSESADFAQLCGDNGLTF-I-GP---PVSAIRDMGDKSASKRIMGAAGVP 164 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~-~-Gp---~~eai~~~~DK~~~r~~l~~~Gvp 164 (765)
..-. .........|.+.|++. + .+ +.+ +...+++.+++.|+.
T Consensus 71 ~tP~-~~~~~~~~ea~~~Gi~~iVi~t~G~~~~------~~~~l~~~A~~~gv~ 117 (288)
T 2nu8_A 71 YVPA-PFCKDSILEAIDAGIKLIITITEGIPTL------DMLTVKVKLDEAGVR 117 (288)
T ss_dssp CCCG-GGHHHHHHHHHHTTCSEEEECCCCCCHH------HHHHHHHHHHHHTCE
T ss_pred ecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHH------HHHHHHHHHHHcCCE
Confidence 4311 12256667777888874 2 22 222 234667778888884
No 368
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=67.53 E-value=11 Score=38.54 Aligned_cols=33 Identities=12% Similarity=0.098 Sum_probs=28.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999998887654
No 369
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=67.52 E-value=8.6 Score=38.84 Aligned_cols=74 Identities=12% Similarity=0.115 Sum_probs=46.1
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-cccEEEEcCCCCcCcCCCCHHHHHHHHHHh-----CC
Q 041518 38 EKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-SADEAIRIGPPPARLSYLNGSSIVDAAIRT-----GA 110 (765)
Q Consensus 38 kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~aD~~~~i~~~~~~~syld~~~Il~~a~~~-----~~ 110 (765)
|++||.|+ |.++..+++.+.+.|+++++++.+......... .--..+.. +..+.+.+.+++++. ++
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~g~i 100 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYG-------DFSCETGIMAFIDLLKTQTSSL 100 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEEC-------CTTSHHHHHHHHHHHHHHCSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEEC-------CCCCHHHHHHHHHHHHHhcCCC
Confidence 68999994 689999999999999999888765432111111 01123332 235555555555442 68
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.++..-|
T Consensus 101 D~lv~nAg 108 (260)
T 3gem_A 101 RAVVHNAS 108 (260)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 98886543
No 370
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=67.39 E-value=9.5 Score=39.90 Aligned_cols=77 Identities=16% Similarity=0.138 Sum_probs=47.4
Q ss_pred EEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCC------cccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 39 KILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDS------LHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 39 kILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~------~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
||+++|.++.|...++++-+.|+++++|.++++... +...+|.+. -++.. ..++ .+.+.+++.+++.++|.
T Consensus 2 rivf~gt~~fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~-gIpv~-~~~~-~~~~~~~~~l~~~~~Dl 78 (305)
T 2bln_A 2 KTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER-GIPVY-APDN-VNHPLWVERIAQLSPDV 78 (305)
T ss_dssp EEEEEECHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH-TCCEE-CCSC-CCSHHHHHHHHHTCCSE
T ss_pred EEEEEEcCHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHc-CCCEE-CCCc-CCcHHHHHHHHhcCCCE
Confidence 899999999999999999999999999999876532 222222210 01100 0011 22245667777777886
Q ss_pred EEe-CCC
Q 041518 113 IHP-GYG 118 (765)
Q Consensus 113 V~p-g~g 118 (765)
++. +|+
T Consensus 79 iv~~~y~ 85 (305)
T 2bln_A 79 IFSFYYR 85 (305)
T ss_dssp EEEESCC
T ss_pred EEEeccc
Confidence 654 454
No 371
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=67.37 E-value=8.8 Score=38.35 Aligned_cols=75 Identities=13% Similarity=0.122 Sum_probs=45.9
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-cccc--EEEEcCCCCcCcCCCCHHHHHHHHHHh----
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KSAD--EAIRIGPPPARLSYLNGSSIVDAAIRT---- 108 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~aD--~~~~i~~~~~~~syld~~~Il~~a~~~---- 108 (765)
-|++||.|+ +.++..+++.+.+.|+++++++.+.+...... .+.+ ..+.+ +..|.+.+.+++++.
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL-------NVTNPESIEAVLKAITDEF 81 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEE-------eCCCHHHHHHHHHHHHHHc
Confidence 479999994 68999999999999999888765432210000 0111 22333 235555555555432
Q ss_pred -CCCEEEeCCC
Q 041518 109 -GAQAIHPGYG 118 (765)
Q Consensus 109 -~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 82 g~iD~lv~nAg 92 (248)
T 3op4_A 82 GGVDILVNNAG 92 (248)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7898886543
No 372
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=67.24 E-value=7.3 Score=39.30 Aligned_cols=33 Identities=12% Similarity=0.034 Sum_probs=28.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5689999999999999998887644
No 373
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=67.17 E-value=2.1 Score=39.38 Aligned_cols=33 Identities=27% Similarity=0.559 Sum_probs=29.8
Q ss_pred CcccCCCcceEEEE---EcCCCCeec---CCC-eEEEEEe
Q 041518 650 GSVLSPMAGLVVKV---LANDGTKVE---EGQ-PILVLEA 682 (765)
Q Consensus 650 ~~v~ap~~G~v~~~---~v~~Gd~V~---~G~-~l~~~ea 682 (765)
..|.||..|+|+++ +++.|+.|+ .|| .|+.|+.
T Consensus 75 ~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~~i~~ 114 (136)
T 1zko_A 75 ADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEI 114 (136)
T ss_dssp EEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEEEEE
T ss_pred EEEecCCCeEEEEEehhhccCccCcccCCCCCeEEEEEEE
Confidence 56999999999999 788999999 898 8999883
No 374
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=66.90 E-value=24 Score=36.89 Aligned_cols=89 Identities=12% Similarity=0.077 Sum_probs=54.7
Q ss_pred CEEEEEcCcHHHH-HHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 38 EKILIANRGEIAY-RIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 38 kkILI~g~G~~a~-~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
-||.|+|.|.++. ..++.++..|+++++|... +... ...+++.+ +. ..-|.|.+.+++ ..++|+|+..
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~-~~~~-~~~~a~~~---~~---~~~~~~~~~ll~---~~~~D~V~i~ 73 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFES-DSDN-RAKFTSLF---PS---VPFAASAEQLIT---DASIDLIACA 73 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECS-CTTS-CHHHHHHS---TT---CCBCSCHHHHHT---CTTCCEEEEC
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCC-CHHH-HHHHHHhc---CC---CcccCCHHHHhh---CCCCCEEEEe
Confidence 4899999987764 5677777789998888643 3321 12233321 11 123666666543 4579999876
Q ss_pred CCcccccHHHHHHHHHCCCcEE
Q 041518 117 YGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
... ..+...+..+.+.|.+++
T Consensus 74 tp~-~~h~~~~~~al~aGkhVl 94 (336)
T 2p2s_A 74 VIP-CDRAELALRTLDAGKDFF 94 (336)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCh-hhHHHHHHHHHHCCCcEE
Confidence 421 233566666777888766
No 375
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=66.80 E-value=19 Score=36.55 Aligned_cols=75 Identities=12% Similarity=0.078 Sum_probs=46.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-c-----ccEEEEcCCCCcCcCCCCHHHHHHHHHHh-
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-S-----ADEAIRIGPPPARLSYLNGSSIVDAAIRT- 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~-----aD~~~~i~~~~~~~syld~~~Il~~a~~~- 108 (765)
-|++||.| .+.++..+++.+.+.|+++++++.+.+....... + --..+.. +..|.+.+.+++++.
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC-------DVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEEC-------CTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEc-------CCCCHHHHHHHHHHHH
Confidence 37999999 4689999999999999998887654332111000 0 0112222 335556665555543
Q ss_pred ----CCCEEEeCCC
Q 041518 109 ----GAQAIHPGYG 118 (765)
Q Consensus 109 ----~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 105 ~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 105 GELGGIDIAVCNAG 118 (276)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 7898886543
No 376
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=66.65 E-value=9.7 Score=39.91 Aligned_cols=73 Identities=7% Similarity=-0.081 Sum_probs=48.4
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHCC-----CeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhC-C
Q 041518 38 EKILIAN-RGEIAYRIMRTAKRLG-----IRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTG-A 110 (765)
Q Consensus 38 kkILI~g-~G~~a~~iiraar~~G-----i~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~-~ 110 (765)
++|||+| .|.++..+++.+.+.| ++++++......... ...--+.+.. +..|.+.+.++++..+ +
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~-~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~~ 73 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWH-EDNPINYVQC-------DISDPDDSQAKLSPLTDV 73 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCC-CSSCCEEEEC-------CTTSHHHHHHHHTTCTTC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcccc-ccCceEEEEe-------ecCCHHHHHHHHhcCCCC
Confidence 4899999 5899999999999999 998888755443210 0000112222 3467777777776555 8
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.|+-.-+
T Consensus 74 d~vih~a~ 81 (364)
T 2v6g_A 74 THVFYVTW 81 (364)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886543
No 377
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=66.64 E-value=13 Score=38.11 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=28.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999 5689999999999999998887644
No 378
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=66.55 E-value=14 Score=37.05 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=28.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999 5689999999999999998887644
No 379
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=66.51 E-value=5.1 Score=41.52 Aligned_cols=34 Identities=12% Similarity=0.033 Sum_probs=29.4
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
|+++|+|+|+|..++.++..|++.|++++++...
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCceEEEECCcHHHHHHHHHHHHCCCcEEEEECC
Confidence 3568999999999999999999999998887654
No 380
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=66.47 E-value=13 Score=37.22 Aligned_cols=36 Identities=11% Similarity=0.249 Sum_probs=30.3
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCC---CeEEEEecCCC
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLG---IRTVAVYSDAD 71 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~G---i~vvav~s~~d 71 (765)
.+|++||.| .|.++..+++.+.+.| ++++++..+..
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~ 59 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE 59 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTT
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChh
Confidence 468999999 5789999999999999 99888876544
No 381
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=66.32 E-value=11 Score=37.92 Aligned_cols=75 Identities=17% Similarity=0.120 Sum_probs=45.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-cccc--EEEEcCCCCcCcCCCCHHHHHHHHHHh----
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KSAD--EAIRIGPPPARLSYLNGSSIVDAAIRT---- 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~aD--~~~~i~~~~~~~syld~~~Il~~a~~~---- 108 (765)
.|++||.| .|.++..+++.+.+.|+++++++.+.+...... .+.. ..+.. +..|.+.+.+++++.
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQM-------DVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-------CTTCHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEe-------eCCCHHHHHHHHHHHHHHc
Confidence 37899999 468999999999999999888764322110000 0001 12222 335556655555443
Q ss_pred -CCCEEEeCCC
Q 041518 109 -GAQAIHPGYG 118 (765)
Q Consensus 109 -~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 81 g~id~lv~~Ag 91 (259)
T 4e6p_A 81 GGLDILVNNAA 91 (259)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7898885543
No 382
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=66.31 E-value=4.2 Score=42.42 Aligned_cols=32 Identities=13% Similarity=0.266 Sum_probs=28.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~ 67 (765)
+.++|+|+|+|..++..+..+++.|++++++.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie 44 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFE 44 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 45699999999999999999999999988775
No 383
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=66.20 E-value=8.5 Score=39.42 Aligned_cols=77 Identities=17% Similarity=0.155 Sum_probs=49.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-ccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-CCCEE
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KSADEAIRIGPPPARLSYLNGSSIVDAAIRT-GAQAI 113 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-~~DaV 113 (765)
-|++||.| .|.++..+++.+.+.|++++++..+.+...... .+......+. -+..|.+.+.+++++. ++|.+
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRE-----LDLQDLSSVRRFADGVSGADVL 90 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEE-----CCTTCHHHHHHHHHTCCCEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEE-----cCCCCHHHHHHHHHhcCCCCEE
Confidence 47999999 468999999999999999888765432210000 0111111111 1346778888888765 67888
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+-.-|
T Consensus 91 v~nAg 95 (291)
T 3rd5_A 91 INNAG 95 (291)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 75533
No 384
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=66.17 E-value=20 Score=37.23 Aligned_cols=74 Identities=7% Similarity=-0.066 Sum_probs=44.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCC-------CeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLG-------IRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~G-------i~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~ 108 (765)
+++|||.| .|.++..+++.+.+.| ++++++..+...... ........+.. +..|.+.+.++++ .
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--~~~~~~~~~~~-----Dl~d~~~~~~~~~-~ 85 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--GFSGAVDARAA-----DLSAPGEAEKLVE-A 85 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--TCCSEEEEEEC-----CTTSTTHHHHHHH-T
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--ccCCceeEEEc-----CCCCHHHHHHHHh-c
Confidence 35899999 6899999999999999 788877654322111 01111111111 2234445555443 5
Q ss_pred CCCEEEeCCC
Q 041518 109 GAQAIHPGYG 118 (765)
Q Consensus 109 ~~DaV~pg~g 118 (765)
++|+|+-.-+
T Consensus 86 ~~d~vih~A~ 95 (342)
T 2hrz_A 86 RPDVIFHLAA 95 (342)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 7999885543
No 385
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=66.13 E-value=5.8 Score=41.88 Aligned_cols=74 Identities=15% Similarity=0.156 Sum_probs=47.1
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCC-eEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCC-HHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGI-RTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLN-GSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi-~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld-~~~Il~~a~~~~~DaV~ 114 (765)
-++|||.|.|.++..+++.|+.+|. +++++..+++.......++|..+. ... .+ .+.+.++. ..++|.|+
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~la~~v~~--~~~-----~~~~~~~~~~~-~~g~D~vi 236 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVN--PLE-----EDLLEVVRRVT-GSGVEVLL 236 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTTCSEEEC--TTT-----SCHHHHHHHHH-SSCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhHHhccC--cCc-----cCHHHHHHHhc-CCCCCEEE
Confidence 4689999999999999999999999 888876543322222222565442 211 12 23344433 45789998
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-..|
T Consensus 237 d~~g 240 (343)
T 2dq4_A 237 EFSG 240 (343)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 6654
No 386
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=66.01 E-value=8.2 Score=38.82 Aligned_cols=33 Identities=21% Similarity=0.147 Sum_probs=28.5
Q ss_pred CCEEEEEcC-c-HHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANR-G-EIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~-G-~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.|+ | .++..+++.+.+.|+++++++.+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 479999998 6 59999999999999998887644
No 387
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=65.88 E-value=6.2 Score=40.60 Aligned_cols=92 Identities=10% Similarity=0.000 Sum_probs=51.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHH-CCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKR-LGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~-~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
|-||.|+| .|.++..+++.+.+ -+++++++..............+ ..-+++ ...-+.|.+.+++ ++|.|+
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~ge-l~g~~~--gv~v~~dl~~ll~-----~~DVVI 78 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGA-FLGKQT--GVALTDDIERVCA-----EADYLI 78 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTT-TTTCCC--SCBCBCCHHHHHH-----HCSEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHH-HhCCCC--CceecCCHHHHhc-----CCCEEE
Confidence 45899999 89999999998876 48888887543222111111111 000011 1122466666654 478887
Q ss_pred eCCCccccc-HHHHHHHHHCCCcEE
Q 041518 115 PGYGFLSES-ADFAQLCGDNGLTFI 138 (765)
Q Consensus 115 pg~g~lsE~-~~~a~~~~~~Gl~~~ 138 (765)
-... .+. ......+.+.|++++
T Consensus 79 DfT~--p~a~~~~~~~al~~G~~vV 101 (272)
T 4f3y_A 79 DFTL--PEGTLVHLDAALRHDVKLV 101 (272)
T ss_dssp ECSC--HHHHHHHHHHHHHHTCEEE
T ss_pred EcCC--HHHHHHHHHHHHHcCCCEE
Confidence 3211 111 234566778888765
No 388
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=65.74 E-value=5.4 Score=43.25 Aligned_cols=35 Identities=9% Similarity=0.174 Sum_probs=30.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCe--EEEEecCC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIR--TVAVYSDA 70 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~--vvav~s~~ 70 (765)
++++|+|+|+|..++..+..+++.|++ ++++..++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 44 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREP 44 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCC
Confidence 457999999999999999999999988 77776543
No 389
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=65.34 E-value=6.6 Score=43.73 Aligned_cols=34 Identities=12% Similarity=0.011 Sum_probs=29.4
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCC---CeEEEEecC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLG---IRTVAVYSD 69 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~G---i~vvav~s~ 69 (765)
|.++|+|+|+|..++.++..+++.| +++.++..+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~ 70 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQN 70 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECC
Confidence 3479999999999999999999988 998887654
No 390
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=65.23 E-value=11 Score=37.32 Aligned_cols=75 Identities=12% Similarity=0.034 Sum_probs=47.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc-EEEEcCCCCcCcCCCCHHHHHHHHHHh-CCCEE
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSAD-EAIRIGPPPARLSYLNGSSIVDAAIRT-GAQAI 113 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD-~~~~i~~~~~~~syld~~~Il~~a~~~-~~DaV 113 (765)
.|++||.| .|.++..+++.+.+.|++++++..+.+.......+.. ..+.. +..|.+.+.++.++. ++|.+
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~l 78 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL-------DVTKKKQIDQFANEVERLDVL 78 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEEC-------CTTCHHHHHHHHHHCSCCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEe-------eCCCHHHHHHHHHHhCCCCEE
Confidence 37899999 4689999999999999998887654321110001111 12222 346667777666665 68988
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+-.-|
T Consensus 79 v~~Ag 83 (246)
T 2ag5_A 79 FNVAG 83 (246)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 85543
No 391
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=65.13 E-value=16 Score=37.71 Aligned_cols=105 Identities=14% Similarity=0.084 Sum_probs=58.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
.+||+|+|. |..+..+++.+++.|++++. ..++... ........ -|.+.+.+ .+++.+|+++.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~-~VnP~~~--g~~i~G~~----------vy~sl~el---~~~~~~Dv~Ii 70 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVA-GVTPGKG--GMEVLGVP----------VYDTVKEA---VAHHEVDASII 70 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEE-EECTTCT--TCEETTEE----------EESSHHHH---HHHSCCSEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEE-EECCCCC--CceECCEE----------eeCCHHHH---hhcCCCCEEEE
Confidence 469999996 88899999999999999542 2233221 11111111 13444444 33557887764
Q ss_pred CCCcccccHHHHHHHHHCCCc-EE-CC---cHHHHHHhcCHHHHHHHHHHCCCC
Q 041518 116 GYGFLSESADFAQLCGDNGLT-FI-GP---PVSAIRDMGDKSASKRIMGAAGVP 164 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~-~~-Gp---~~eai~~~~DK~~~r~~l~~~Gvp 164 (765)
..-. .......+.|.+.|++ .+ .. +.+ +....++.+++.|+.
T Consensus 71 ~vp~-~~~~~~~~ea~~~Gi~~vVi~t~G~~~~------~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 71 FVPA-PAAADAALEAAHAGIPLIVLITEGIPTL------DMVRAVEEIKALGSR 117 (288)
T ss_dssp CCCH-HHHHHHHHHHHHTTCSEEEECCSCCCHH------HHHHHHHHHHHHTCE
T ss_pred ecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHH------HHHHHHHHHHHcCCE
Confidence 3210 0113445666777877 22 22 221 245667777788873
No 392
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=65.05 E-value=9.6 Score=40.29 Aligned_cols=77 Identities=19% Similarity=0.182 Sum_probs=48.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-cccEEEEcCCCCcCcCCCCHHHHHHHHH---HhCCCE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-SADEAIRIGPPPARLSYLNGSSIVDAAI---RTGAQA 112 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~aD~~~~i~~~~~~~syld~~~Il~~a~---~~~~Da 112 (765)
-++|||.|.|.++..+++.|+.+|.+++++..+++....... -+|..+.... .-...+.+.+... ..++|.
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~-----~~~~~~~i~~~~~~~~g~g~D~ 243 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDP-----AKEEESSIIERIRSAIGDLPNV 243 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCT-----TTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcc-----cccHHHHHHHHhccccCCCCCE
Confidence 479999999999999999999999997776544322111111 2455443210 0123456666554 357999
Q ss_pred EEeCCC
Q 041518 113 IHPGYG 118 (765)
Q Consensus 113 V~pg~g 118 (765)
|+-..|
T Consensus 244 vid~~g 249 (352)
T 1e3j_A 244 TIDCSG 249 (352)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 996654
No 393
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=65.01 E-value=3.6 Score=45.77 Aligned_cols=72 Identities=17% Similarity=0.094 Sum_probs=46.1
Q ss_pred EEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC
Q 041518 39 KILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY 117 (765)
Q Consensus 39 kILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~ 117 (765)
||+|+|.|..+..+++.+.+.|+.+++++.+++........-|..+..+. ..+ ..+++-|.-.++|+++...
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd------~~~-~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGH------ASH-PDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESC------TTC-HHHHHHHTTTTCSEEEECC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEc------CCC-HHHHHhcCCCcCCEEEEEc
Confidence 79999999999999999999999999998665432111111233333332 123 3444555556677777554
No 394
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=64.98 E-value=8.8 Score=40.79 Aligned_cols=31 Identities=19% Similarity=0.387 Sum_probs=28.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEe
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~ 67 (765)
.+||||+|.|..+..+++.+...|+..+.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~Itlv 64 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFV 64 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEe
Confidence 4799999999999999999999999877664
No 395
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=64.83 E-value=15 Score=41.36 Aligned_cols=86 Identities=16% Similarity=0.093 Sum_probs=55.8
Q ss_pred CCEEEEEcCcHHHHHHHHHH-HHCCCeEEEEecCCCCCCcc-----cccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 37 IEKILIANRGEIAYRIMRTA-KRLGIRTVAVYSDADRDSLH-----VKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraa-r~~Gi~vvav~s~~d~~~~~-----~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
-||++|.|.+..+..+++.+ +++|++++.+.+........ ..+.+..+ + ..|...+.+.+++.++
T Consensus 280 GKrv~i~gd~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~~~~~~~~~~~~~v~-i--------~~D~~el~~~i~~~~p 350 (525)
T 3aek_B 280 GKRVFIFGDGTHVIAAARIAAKEVGFEVVGMGCYNREMARPLRTAAAEYGLEAL-I--------TDDYLEVEKAIEAAAP 350 (525)
T ss_dssp TCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEESCGGGHHHHHHHHHHTTCCCE-E--------CSCHHHHHHHHHHHCC
T ss_pred CCEEEEEcCchHHHHHHHHHHHHcCCeeEEEecCchhHHHHHHHHHHhcCCcEE-E--------eCCHHHHHHHHhhcCC
Confidence 37999999888899999999 89999998776532111100 01122222 1 1356788889999999
Q ss_pred CEEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 111 QAIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 111 DaV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
|.++.+ ..-.....+.|+|++
T Consensus 351 DL~ig~-------~~~~~~a~~~giP~~ 371 (525)
T 3aek_B 351 ELILGT-------QMERNIAKKLGLPCA 371 (525)
T ss_dssp SEEEEC-------HHHHHHHHHHTCCEE
T ss_pred CEEEec-------chhHHHHHHcCCCEE
Confidence 998844 122334456777765
No 396
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=64.78 E-value=43 Score=35.28 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=29.6
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDAD 71 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d 71 (765)
.|++||.| .+.++..+++.+.+.|++++++..+..
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~ 80 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQ 80 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChh
Confidence 47899999 468999999999999999988876544
No 397
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=64.64 E-value=5.5 Score=43.52 Aligned_cols=33 Identities=6% Similarity=0.107 Sum_probs=27.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCC--CeEEEEec
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLG--IRTVAVYS 68 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~G--i~vvav~s 68 (765)
|-|||+|+|+|..++.+++.+++++ +++.+|..
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CCCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 5579999999999999999999876 78777753
No 398
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=64.61 E-value=7.6 Score=40.30 Aligned_cols=92 Identities=12% Similarity=0.122 Sum_probs=50.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHH-CCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKR-LGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~-~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+-||.|+| .|.++..+++++.+ -+++.+++..............+. .-+++ ....-+.|.+.+++ ++|+|+
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel-~G~~~-~gv~v~~dl~~ll~-----~aDVvI 93 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASIL-IGSDF-LGVRITDDPESAFS-----NTEGIL 93 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGG-TTCSC-CSCBCBSCHHHHTT-----SCSEEE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHh-hccCc-CCceeeCCHHHHhc-----CCCEEE
Confidence 45999999 89999999999875 589988886443221111111110 00000 01112456666553 678776
Q ss_pred eCCCccccc--HHHHHHHHHCCCcEE
Q 041518 115 PGYGFLSES--ADFAQLCGDNGLTFI 138 (765)
Q Consensus 115 pg~g~lsE~--~~~a~~~~~~Gl~~~ 138 (765)
- |..-. ......|.+.|++++
T Consensus 94 D---FT~p~a~~~~~~~~l~~Gv~vV 116 (288)
T 3ijp_A 94 D---FSQPQASVLYANYAAQKSLIHI 116 (288)
T ss_dssp E---CSCHHHHHHHHHHHHHHTCEEE
T ss_pred E---cCCHHHHHHHHHHHHHcCCCEE
Confidence 2 21111 233566777787764
No 399
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=64.56 E-value=8.5 Score=38.17 Aligned_cols=33 Identities=18% Similarity=0.077 Sum_probs=28.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence 37899999 4789999999999999998887654
No 400
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=64.36 E-value=5.6 Score=44.17 Aligned_cols=36 Identities=11% Similarity=0.244 Sum_probs=29.1
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCC
Q 041518 35 QRIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDAD 71 (765)
Q Consensus 35 ~~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d 71 (765)
+..++|+|+|+|.++.++++.+.+ ++.+..+..+.+
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~d~~ 268 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIERNLQ 268 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHH
T ss_pred ccccEEEEEcchHHHHHHHHHhhh-cCceEEEecCHH
Confidence 357899999999999999999864 588877765543
No 401
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=64.29 E-value=15 Score=36.26 Aligned_cols=77 Identities=21% Similarity=0.221 Sum_probs=48.7
Q ss_pred CEEEE--EcCcHHHHHHHHHHHHC--CCeEEEEecCCCCCCcccccccE----EEEcCCCCcCcCCCC----HHHHHHHH
Q 041518 38 EKILI--ANRGEIAYRIMRTAKRL--GIRTVAVYSDADRDSLHVKSADE----AIRIGPPPARLSYLN----GSSIVDAA 105 (765)
Q Consensus 38 kkILI--~g~G~~a~~iiraar~~--Gi~vvav~s~~d~~~~~~~~aD~----~~~i~~~~~~~syld----~~~Il~~a 105 (765)
+||.| .|.|..+..+++++.+. ++++++|.++++. ++....|.+ .+.+++ .+|.+ -+.+++.+
T Consensus 4 ~ki~vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~-~~v~~~A~~~gIp~~~~~~----~~~~~~~~~~~~~~~~l 78 (212)
T 3av3_A 4 KRLAVFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPG-AKVIERAARENVPAFVFSP----KDYPSKAAFESEILREL 78 (212)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTT-CHHHHHHHHTTCCEEECCG----GGSSSHHHHHHHHHHHH
T ss_pred cEEEEEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCC-cHHHHHHHHcCCCEEEeCc----ccccchhhhHHHHHHHH
Confidence 56654 58889999999999876 6898888887432 233333332 122222 23333 24688888
Q ss_pred HHhCCCEEEe-CCCc
Q 041518 106 IRTGAQAIHP-GYGF 119 (765)
Q Consensus 106 ~~~~~DaV~p-g~g~ 119 (765)
++.++|.|+. +|+.
T Consensus 79 ~~~~~Dliv~a~y~~ 93 (212)
T 3av3_A 79 KGRQIDWIALAGYMR 93 (212)
T ss_dssp HHTTCCEEEESSCCS
T ss_pred HhcCCCEEEEchhhh
Confidence 8999998774 4543
No 402
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=64.25 E-value=11 Score=38.01 Aligned_cols=75 Identities=12% Similarity=0.066 Sum_probs=45.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcc-ccccc--EEEEcCCCCcCcCCCCHHHHHHHHHHh----
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLH-VKSAD--EAIRIGPPPARLSYLNGSSIVDAAIRT---- 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~-~~~aD--~~~~i~~~~~~~syld~~~Il~~a~~~---- 108 (765)
.|++||.| .|.++..+++.+.+.|+++++++.+.+..... ..+.+ ..+.. +..|.+.+.+++++.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHL-------DVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEe-------cCCCHHHHHHHHHHHHHHc
Confidence 47899999 56899999999999999988876543211000 00111 12322 335556555555432
Q ss_pred -CCCEEEeCCC
Q 041518 109 -GAQAIHPGYG 118 (765)
Q Consensus 109 -~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 80 g~iD~lv~~Ag 90 (260)
T 1nff_A 80 GGLHVLVNNAG 90 (260)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7998886543
No 403
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=64.22 E-value=13 Score=37.40 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=28.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 49 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA 49 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 47899999 5689999999999999998887543
No 404
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=64.08 E-value=4.9 Score=38.89 Aligned_cols=32 Identities=25% Similarity=0.267 Sum_probs=25.5
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~ 67 (765)
|||+++|+|.|..+..++..++..||+++++.
T Consensus 2 ~m~~~~I~Gagg~gk~v~~~~~~~~~~v~~f~ 33 (194)
T 3bfp_A 2 RTEKIYIYGASGHGLVCEDVAKNMGYKECIFL 33 (194)
T ss_dssp CCSEEEEEC--CHHHHHHHHHHHHTCSEEEEE
T ss_pred CCccEEEEeCCHHHHHHHHHHHhCCCeEEEEE
Confidence 56899999999999999999888888877654
No 405
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=63.59 E-value=17 Score=36.13 Aligned_cols=64 Identities=14% Similarity=0.267 Sum_probs=46.9
Q ss_pred EEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC
Q 041518 39 KILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY 117 (765)
Q Consensus 39 kILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~ 117 (765)
||||+| .|.++..+++.+.+ |++++++..+.... .. +.. +..|.+.+.++++..++|.|+-.-
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-------~~-~~~-------Dl~~~~~~~~~~~~~~~d~vi~~a 65 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-------GG-YKL-------DLTDFPRLEDFIIKKRPDVIINAA 65 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-------TC-EEC-------CTTSHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-------CC-cee-------ccCCHHHHHHHHHhcCCCEEEECC
Confidence 699999 58999999999985 89988876554321 11 322 446778888888777899988664
Q ss_pred C
Q 041518 118 G 118 (765)
Q Consensus 118 g 118 (765)
+
T Consensus 66 ~ 66 (273)
T 2ggs_A 66 A 66 (273)
T ss_dssp C
T ss_pred c
Confidence 4
No 406
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=63.50 E-value=15 Score=36.70 Aligned_cols=34 Identities=18% Similarity=0.122 Sum_probs=28.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
.|++||.|+ |.++..+++.+.+.|++++++..+.
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~ 38 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD 38 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 378999995 6899999999999999988876543
No 407
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=63.46 E-value=5.6 Score=42.44 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=49.3
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKS-ADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
.-++|||.|.|.++..+++.|+.+|.+++++..++.......++ +|..+. .. .....+.+.++....++|.|+
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~--~~----~~~~~~~v~~~~~g~g~D~vi 262 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGIN--RL----EEDWVERVYALTGDRGADHIL 262 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEE--TT----TSCHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEc--CC----cccHHHHHHHHhCCCCceEEE
Confidence 34799999999999999999999999988876543322111122 455443 10 011234555555445899998
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-..|
T Consensus 263 d~~g 266 (363)
T 3uog_A 263 EIAG 266 (363)
T ss_dssp EETT
T ss_pred ECCC
Confidence 6655
No 408
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=63.45 E-value=15 Score=37.16 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=28.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCART 65 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999 5789999999999999998887654
No 409
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=63.42 E-value=8.2 Score=41.40 Aligned_cols=34 Identities=15% Similarity=0.237 Sum_probs=29.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
..+|+|+|+|..++.++..|++.|+++.++...+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3599999999999999999999999988886543
No 410
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=63.16 E-value=5.7 Score=39.84 Aligned_cols=75 Identities=5% Similarity=-0.041 Sum_probs=44.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc---ccEEEEcCCCCcCcCCCCHHHHHHHHHHh--CC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKS---ADEAIRIGPPPARLSYLNGSSIVDAAIRT--GA 110 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~---aD~~~~i~~~~~~~syld~~~Il~~a~~~--~~ 110 (765)
||++||.| .|.++..+++.+.+.|+++++++.+.+.......+ ......+ +..+.+.+++.+.+. ++
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-------d~~~v~~~~~~~~~~~g~i 73 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-------SEQEPAELIEAVTSAYGQV 73 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-------CCCSHHHHHHHHHHHHSCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-------CHHHHHHHHHHHHHHhCCC
Confidence 58999999 46789999999999999988765443221000000 0011111 235566666655443 68
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.++-.-|
T Consensus 74 D~lv~nAg 81 (254)
T 1zmt_A 74 DVLVSNDI 81 (254)
T ss_dssp CEEEEECC
T ss_pred CEEEECCC
Confidence 98875533
No 411
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=63.07 E-value=5 Score=41.56 Aligned_cols=64 Identities=22% Similarity=0.239 Sum_probs=41.9
Q ss_pred CCcccCCCcceEEEEEcCCCCeecCCCeEEEEEecceEEEEEcCCCeEEEEEEcCCCCccCCCCeEEEEEeCc
Q 041518 649 PGSVLSPMAGLVVKVLANDGTKVEEGQPILVLEAMKMEHVVKAPTTGVVHGLQVTAGQQVSDGSVLFRLQAVH 721 (765)
Q Consensus 649 ~~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~~eamKm~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~~~~ 721 (765)
...|.|+.+|+|+.+- +.-.-|. .++|+--.-...+.+. +.++.|++||.|..|++|..+....
T Consensus 190 GtpV~A~~~G~V~~~g----~~~~~G~-~ViI~Hg~G~~t~Y~H----L~~i~V~~G~~V~~Gq~IG~vG~tG 253 (282)
T 2hsi_A 190 GTPIKAPAAGKVILIG----DYFFNGK-TVFVDHGQGFISMFCH----LSKIDVKLGQQVPRGGVLGKVGATG 253 (282)
T ss_dssp TCEEECSSCEEEEEEE----EETTTEE-EEEEEEETTEEEEEEE----ESEECSCTTCEECTTCEEEECCCTT
T ss_pred CCeEEeccCeEEEEEE----EcCCCCC-EEEEEeCCcEEEEEEC----CCccccCCcCEECCCCEEEEECCCC
Confidence 3569999999998763 1111233 3344433333444443 3357899999999999999987653
No 412
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=62.98 E-value=14 Score=40.52 Aligned_cols=76 Identities=13% Similarity=0.088 Sum_probs=44.7
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCC--eEEEEecCCCCCCccc--ccc-cEEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGI--RTVAVYSDADRDSLHV--KSA-DEAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi--~vvav~s~~d~~~~~~--~~a-D~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
||++|+|+|+|-.++..+..|++.|+ +++++........... +.. ...+..++..-.........+.+++++.+.
T Consensus 1 m~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl 80 (477)
T 3nks_A 1 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGL 80 (477)
T ss_dssp -CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTC
T ss_pred CCceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCC
Confidence 56899999999999999999999999 8777654322211111 112 223333332110000014567788888776
Q ss_pred C
Q 041518 111 Q 111 (765)
Q Consensus 111 D 111 (765)
+
T Consensus 81 ~ 81 (477)
T 3nks_A 81 D 81 (477)
T ss_dssp G
T ss_pred c
Confidence 5
No 413
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=62.69 E-value=6.5 Score=38.71 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=28.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
+|++||.|+ |.++..+++.+.+.|++++++..+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 589999995 679999999999999998887644
No 414
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=62.61 E-value=30 Score=35.56 Aligned_cols=72 Identities=7% Similarity=0.015 Sum_probs=45.2
Q ss_pred CEEEEEc-CcHHHHHHHHHHHHCC--CeEEEEecCCCCCC-ccc-ccc---c-EEEEcCCCCcCcCCCCHHHHHHHHHHh
Q 041518 38 EKILIAN-RGEIAYRIMRTAKRLG--IRTVAVYSDADRDS-LHV-KSA---D-EAIRIGPPPARLSYLNGSSIVDAAIRT 108 (765)
Q Consensus 38 kkILI~g-~G~~a~~iiraar~~G--i~vvav~s~~d~~~-~~~-~~a---D-~~~~i~~~~~~~syld~~~Il~~a~~~ 108 (765)
+||||+| .|.++..+++.+.+.| ++++++........ ... .+. . +.+.. +..|.+.+.+++ .
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~--~ 74 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKG-------DVADYELVKELV--R 74 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHH--H
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEc-------CCCCHHHHHHHh--h
Confidence 3799999 5899999999999986 88888764321110 010 010 1 11221 346667777766 5
Q ss_pred CCCEEEeCCC
Q 041518 109 GAQAIHPGYG 118 (765)
Q Consensus 109 ~~DaV~pg~g 118 (765)
++|.|+-.-+
T Consensus 75 ~~d~vih~A~ 84 (336)
T 2hun_A 75 KVDGVVHLAA 84 (336)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 8999886544
No 415
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=62.60 E-value=6.8 Score=40.98 Aligned_cols=88 Identities=15% Similarity=0.064 Sum_probs=53.5
Q ss_pred CEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 38 EKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
-||.|+|.|.++...++.+++. +++++++.. .+.. ....+++.. +. ...|.+.+.++ +.++|+|+..
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d-~~~~-~~~~~~~~~---~~---~~~~~~~~~~l----~~~~D~V~i~ 69 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYS-RKLE-TAATFASRY---QN---IQLFDQLEVFF----KSSFDLVYIA 69 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEEC-SSHH-HHHHHGGGS---SS---CEEESCHHHHH----TSSCSEEEEC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEe-CCHH-HHHHHHHHc---CC---CeEeCCHHHHh----CCCCCEEEEe
Confidence 3899999999999999999887 678777753 2321 111223221 00 01245656554 4679999876
Q ss_pred CCcccccHHHHHHHHHCCCcEE
Q 041518 117 YGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
... ..+..++..+.+.|.+++
T Consensus 70 tp~-~~h~~~~~~al~~gk~V~ 90 (325)
T 2ho3_A 70 SPN-SLHFAQAKAALSAGKHVI 90 (325)
T ss_dssp SCG-GGHHHHHHHHHHTTCEEE
T ss_pred CCh-HHHHHHHHHHHHcCCcEE
Confidence 421 123555666667787655
No 416
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=62.59 E-value=41 Score=33.84 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=29.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDAD 71 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d 71 (765)
.|++||.| .+.++..+++.+.+.|+++++++.+..
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 41 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAV 41 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCS
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccch
Confidence 47999999 467999999999999999888876543
No 417
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=62.45 E-value=14 Score=37.50 Aligned_cols=33 Identities=18% Similarity=0.122 Sum_probs=28.0
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|+++++++.+
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5689999999999999998887543
No 418
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=62.43 E-value=7.5 Score=42.32 Aligned_cols=34 Identities=3% Similarity=0.075 Sum_probs=29.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHH--CCCeEEEEecC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKR--LGIRTVAVYSD 69 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~--~Gi~vvav~s~ 69 (765)
|+++|+|+|+|..++..+..+++ .|+++.++..+
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~ 36 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CCCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 56899999999999999999999 78998887644
No 419
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=62.43 E-value=25 Score=34.11 Aligned_cols=46 Identities=15% Similarity=0.073 Sum_probs=33.7
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEE
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIR 85 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~ 85 (765)
.++||.|+|.|.++..+++.+.+.|+++++++.+++ ...-+|-.+.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~----~~~~aD~vi~ 63 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ----ATTLGEIVIM 63 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC----CSSCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH----HhccCCEEEE
Confidence 456999999999999999999999999777644332 3345665543
No 420
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=62.38 E-value=14 Score=39.27 Aligned_cols=32 Identities=6% Similarity=0.106 Sum_probs=27.9
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEec
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYS 68 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s 68 (765)
+.+|||.| .|.++..+++.+.+.|++|++++.
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEe
Confidence 57999999 589999999999999999988753
No 421
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=62.37 E-value=6.7 Score=41.89 Aligned_cols=89 Identities=15% Similarity=0.099 Sum_probs=53.9
Q ss_pred CEEEEEcCcHHH-HHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 38 EKILIANRGEIA-YRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 38 kkILI~g~G~~a-~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
-||.|+|.|.++ ...+..++..|+++++|... +.. ....+++++ +. ..-|.+.+.+++ ..++|+|+..
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~-~~~-~a~~~a~~~---~~---~~~~~~~~~ll~---~~~vD~V~I~ 95 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEK-DDA-LAAEFSAVY---AD---ARRIATAEEILE---DENIGLIVSA 95 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECS-CHH-HHHHHHHHS---SS---CCEESCHHHHHT---CTTCCEEEEC
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcC-CHH-HHHHHHHHc---CC---CcccCCHHHHhc---CCCCCEEEEe
Confidence 489999998766 34667777889999988642 321 112223221 10 123567666654 4579999866
Q ss_pred CCcccccHHHHHHHHHCCCcEE
Q 041518 117 YGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
.-. ..+..++..+.++|..++
T Consensus 96 tp~-~~H~~~~~~al~aGkhVl 116 (361)
T 3u3x_A 96 AVS-SERAELAIRAMQHGKDVL 116 (361)
T ss_dssp CCH-HHHHHHHHHHHHTTCEEE
T ss_pred CCh-HHHHHHHHHHHHCCCeEE
Confidence 421 123455667777888766
No 422
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=62.33 E-value=3.2 Score=43.06 Aligned_cols=72 Identities=17% Similarity=0.135 Sum_probs=49.9
Q ss_pred CCCE-EEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCC-EE
Q 041518 36 RIEK-ILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQ-AI 113 (765)
Q Consensus 36 ~~kk-ILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~D-aV 113 (765)
||+| -||+|.|..-..+++++++.|+.++++.-.........++++..+.+ .....+++..++.+++ ++
T Consensus 3 mM~kigIIAG~G~LP~~iak~a~~~G~~~~ii~l~g~~d~~l~~~~~~~i~i---------g~~G~ii~~lk~~~v~~vv 73 (283)
T 4ggi_A 3 MMRKLGLIAGGGALPVELASHCEAAGRAFAVMRLRSFADPSLDRYPGADVGI---------GEFGKIFKALRAEGCDVVC 73 (283)
T ss_dssp -CCCCEEEECSSSTTTTTTTHHHHTTCCCCEEEETTTCCSTTTTSSEEEECT---------TCTTHHHHHHHHHTCCCEE
T ss_pred CCccEEEEEcCCccHHHHHHHHHHCCCCeEEEEeCCCCchhhhhCCceEEcH---------HHHHHHHHHHHHhchhhee
Confidence 5665 57789998888899999999999877754433333334455554433 3456899999999986 45
Q ss_pred EeC
Q 041518 114 HPG 116 (765)
Q Consensus 114 ~pg 116 (765)
+.|
T Consensus 74 maG 76 (283)
T 4ggi_A 74 FAG 76 (283)
T ss_dssp EES
T ss_pred eec
Confidence 555
No 423
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=62.24 E-value=19 Score=36.70 Aligned_cols=33 Identities=21% Similarity=0.178 Sum_probs=28.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEec
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYS 68 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s 68 (765)
+.|++||.|+ +.++..+++.+.+.|+++++++.
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 3579999994 68999999999999999887754
No 424
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=62.23 E-value=5.4 Score=44.16 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=29.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
||+|+|+|+|..++-.+..|.+.|++|.++....
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 7999999999999999999999999988775443
No 425
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=62.13 E-value=23 Score=39.25 Aligned_cols=98 Identities=11% Similarity=0.076 Sum_probs=57.8
Q ss_pred CcCCCCEEEEEcCcHHHHHHHHHHHH-CCC---eEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHH-HHHH
Q 041518 33 KQQRIEKILIANRGEIAYRIMRTAKR-LGI---RTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVD-AAIR 107 (765)
Q Consensus 33 ~~~~~kkILI~g~G~~a~~iiraar~-~Gi---~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~-~a~~ 107 (765)
+....+||||+|.|.++.-+++.|.+ .++ ++++++.+..........--......- +-.|.+.+++ ++++
T Consensus 9 ~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~V-----dadnv~~~l~aLl~~ 83 (480)
T 2ph5_A 9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQI-----TPQNYLEVIGSTLEE 83 (480)
T ss_dssp CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCC-----CTTTHHHHTGGGCCT
T ss_pred eecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEec-----cchhHHHHHHHHhcC
Confidence 34445789999999999888877766 466 566665443322111111112222211 1245556554 4443
Q ss_pred hCCCEEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 108 TGAQAIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 108 ~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
+ |+|+-.. +...+..+.++|.+.|+.++
T Consensus 84 -~-DvVIN~s-~~~~~l~Im~acleaGv~Yl 111 (480)
T 2ph5_A 84 -N-DFLIDVS-IGISSLALIILCNQKGALYI 111 (480)
T ss_dssp -T-CEEEECC-SSSCHHHHHHHHHHHTCEEE
T ss_pred -C-CEEEECC-ccccCHHHHHHHHHcCCCEE
Confidence 4 9998643 23345788999999999988
No 426
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=62.04 E-value=3 Score=44.04 Aligned_cols=111 Identities=16% Similarity=0.086 Sum_probs=60.9
Q ss_pred CEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeCC
Q 041518 38 EKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPGY 117 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg~ 117 (765)
++++|+|.|..+..+++.+.+.|+ +++++.+++... .+..+..+..+. ..+.+.+. .+.-.++|+++...
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~~~~~~~i~gd------~~~~~~L~-~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK--VLRSGANFVHGD------PTRVSDLE-KANVRGARAVIVDL 185 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH--HHHTTCEEEESC------TTSHHHHH-HTCSTTEEEEEECC
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh--HHhCCcEEEEeC------CCCHHHHH-hcChhhccEEEEcC
Confidence 589999999999999999999999 888865544321 111222222222 24444443 33335678888765
Q ss_pred CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCC
Q 041518 118 GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVP 164 (765)
Q Consensus 118 g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvp 164 (765)
+....|...+..+.+.+- +...+....|.... +.++++|+.
T Consensus 186 ~~d~~n~~~~~~ar~~~~-----~~~iiar~~~~~~~-~~l~~~G~d 226 (336)
T 1lnq_A 186 ESDSETIHCILGIRKIDE-----SVRIIAEAERYENI-EQLRMAGAD 226 (336)
T ss_dssp SSHHHHHHHHHHHHTTCT-----TSEEEEECSSGGGH-HHHHHTTCS
T ss_pred CccHHHHHHHHHHHHHCC-----CCeEEEEECCHHHH-HHHHHcCCC
Confidence 432223333444444432 22222233333332 445567765
No 427
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=61.94 E-value=12 Score=37.88 Aligned_cols=33 Identities=24% Similarity=0.200 Sum_probs=28.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 478999995 689999999999999998887654
No 428
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=61.92 E-value=51 Score=34.03 Aligned_cols=99 Identities=9% Similarity=-0.006 Sum_probs=51.8
Q ss_pred CEEEEEcCcH--H---HHHHHHHHHHCCCeEEEEecCCCCCCccccc-ccEEEEcCCCCcCcC------------CCCHH
Q 041518 38 EKILIANRGE--I---AYRIMRTAKRLGIRTVAVYSDADRDSLHVKS-ADEAIRIGPPPARLS------------YLNGS 99 (765)
Q Consensus 38 kkILI~g~G~--~---a~~iiraar~~Gi~vvav~s~~d~~~~~~~~-aD~~~~i~~~~~~~s------------yld~~ 99 (765)
+|||++..|. . +..+++.+++.|+++.++............. --..+.++....... .....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWR 86 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHHHHH
Confidence 5888886441 1 3578999999999988776543211111111 112233332110000 00234
Q ss_pred HHHHHHHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 100 SIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 100 ~Il~~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
.+.+++++.++|.||....+.+ .....+....|+|++
T Consensus 87 ~l~~~l~~~~pDvv~~~~~~~~--~~~~~~~~~~~~p~v 123 (364)
T 1f0k_A 87 QARAIMKAYKPDVVLGMGGYVS--GPGGLAAWSLGIPVV 123 (364)
T ss_dssp HHHHHHHHHCCSEEEECSSTTH--HHHHHHHHHTTCCEE
T ss_pred HHHHHHHhcCCCEEEEeCCcCc--hHHHHHHHHcCCCEE
Confidence 5677778889999997643211 112233455677765
No 429
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=61.75 E-value=9.2 Score=39.15 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=28.0
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEe
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~ 67 (765)
||+||.|+|. |.++..+++.+.+.|+++++++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~ 42 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIE 42 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEEC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEE
Confidence 5679999999 9999999999999999876543
No 430
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=61.74 E-value=71 Score=31.97 Aligned_cols=33 Identities=6% Similarity=-0.088 Sum_probs=28.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
-|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 479999994 689999999999999999888654
No 431
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=61.73 E-value=17 Score=36.71 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=28.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5689999999999999998887644
No 432
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=61.69 E-value=6.3 Score=41.61 Aligned_cols=76 Identities=18% Similarity=0.231 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCccccc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKS-ADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
.-++|||.|. |.++..+++.++.+|.+++++..+.+......++ +|..+... ....+.+.+.....++|.+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-------~~~~~~v~~~~~~~g~Dvv 231 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-------EGWAKAVREATGGAGVDMV 231 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-------TTHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-------hhHHHHHHHHhCCCCceEE
Confidence 3479999997 9999999999999999998887654432222221 34443211 0112333333333478999
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+-..|
T Consensus 232 id~~g 236 (342)
T 4eye_A 232 VDPIG 236 (342)
T ss_dssp EESCC
T ss_pred EECCc
Confidence 86655
No 433
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=61.68 E-value=9.1 Score=40.66 Aligned_cols=32 Identities=13% Similarity=0.146 Sum_probs=28.4
Q ss_pred EEEEEcCcHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 39 KILIANRGEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 39 kILI~g~G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
||+|+|+|..++-++..|++.|+++.++..++
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 89999999999999999999999988775443
No 434
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=61.47 E-value=6.6 Score=38.75 Aligned_cols=75 Identities=12% Similarity=0.036 Sum_probs=47.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-ccc-EEEEcCCCCcCcCCCCHHHHHHHHHHh-CCCE
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-SAD-EAIRIGPPPARLSYLNGSSIVDAAIRT-GAQA 112 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~aD-~~~~i~~~~~~~syld~~~Il~~a~~~-~~Da 112 (765)
.|++||.|+ |.++..+++.+.+.|++++++..+.+....... ... +.+.. +..+.+.+.+++++. ++|.
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-------D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCV-------DLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEEC-------CTTCHHHHHHHHTTCCCCSE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEe-------cCCCHHHHHHHHHHcCCCCE
Confidence 368999995 789999999999999998887644221100000 001 22222 346777777777654 4798
Q ss_pred EEeCCC
Q 041518 113 IHPGYG 118 (765)
Q Consensus 113 V~pg~g 118 (765)
++-.-|
T Consensus 80 vi~~Ag 85 (244)
T 1cyd_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 886543
No 435
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=61.47 E-value=12 Score=38.54 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=29.2
Q ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 36 RIEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 36 ~~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
+.++|||.|+ |.++..+++.+.+.|++++++..+
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3579999995 899999999999999998887643
No 436
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=61.38 E-value=24 Score=35.56 Aligned_cols=75 Identities=15% Similarity=0.043 Sum_probs=46.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc-c--ccEEEEcCCCCcCcCCCCHHHHHHHHHHh----
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVK-S--ADEAIRIGPPPARLSYLNGSSIVDAAIRT---- 108 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~-~--aD~~~~i~~~~~~~syld~~~Il~~a~~~---- 108 (765)
.|++||.|+ +.++..+++.+.+.|+++++++.+.+....... + --..+.. +..|.+.+.+++++.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVV-------DLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEEC-------CTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEEC-------CCCCHHHHHHHHHHHHHHc
Confidence 478999995 689999999999999998887655432111000 0 0112222 335555555555443
Q ss_pred -CCCEEEeCCC
Q 041518 109 -GAQAIHPGYG 118 (765)
Q Consensus 109 -~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 84 g~id~lv~nAg 94 (271)
T 3tzq_B 84 GRLDIVDNNAA 94 (271)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7898886543
No 437
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=61.22 E-value=13 Score=37.52 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=28.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 37899999 5689999999999999998887654
No 438
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=61.19 E-value=6.1 Score=42.82 Aligned_cols=77 Identities=19% Similarity=0.223 Sum_probs=48.2
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCC-eEEEEecCCCCCCccccc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGI-RTVAVYSDADRDSLHVKS-ADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi-~vvav~s~~d~~~~~~~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
.-++|||.|.|.++..+++.|+.+|. +++++..++.......++ +|..+. .. +....+.+.++....++|.|
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~--~~----~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVID--PT----KENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEEC--TT----TSCHHHHHHHHTTTCCCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEc--CC----CCCHHHHHHHHhCCCCCCEE
Confidence 34699999999999999999999999 777765443322111122 454442 21 11223445555444579999
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+-..|
T Consensus 287 id~~g 291 (404)
T 3ip1_A 287 LEATG 291 (404)
T ss_dssp EECSS
T ss_pred EECCC
Confidence 97655
No 439
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=61.18 E-value=12 Score=37.49 Aligned_cols=32 Identities=6% Similarity=0.059 Sum_probs=27.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEec
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYS 68 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s 68 (765)
.|++||.|+ +.++..+++.+.+.|+++++++.
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 478999994 68999999999999999888765
No 440
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=61.13 E-value=7.3 Score=44.43 Aligned_cols=38 Identities=13% Similarity=0.051 Sum_probs=31.5
Q ss_pred cCCCCEEEEEcCcHHHHHHHHHHHHC--CCeEEEEecCCC
Q 041518 34 QQRIEKILIANRGEIAYRIMRTAKRL--GIRTVAVYSDAD 71 (765)
Q Consensus 34 ~~~~kkILI~g~G~~a~~iiraar~~--Gi~vvav~s~~d 71 (765)
.+++++|+|+|+|..++..+..+++. |++++++..++.
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 72 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEY 72 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 34578999999999999999999998 899888765443
No 441
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=61.07 E-value=13 Score=39.92 Aligned_cols=144 Identities=13% Similarity=0.146 Sum_probs=79.4
Q ss_pred CCEEEEEcCc-HHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRG-EIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G-~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
+-||.|+|.| .++...++.+++. +++++++.. .+.. ....++.++ +. ..|.+.+.+++ ...+|+|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~a~~~---g~----~~~~~~~ell~---~~~vD~V~ 69 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACD-PNED-VRERFGKEY---GI----PVFATLAEMMQ---HVQMDAVY 69 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEEC-SCHH-HHHHHHHHH---TC----CEESSHHHHHH---HSCCSEEE
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEe-CCHH-HHHHHHHHc---CC----CeECCHHHHHc---CCCCCEEE
Confidence 3489999999 7777788888875 788887763 2321 111222221 11 12566666554 56899999
Q ss_pred eCCCcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCCcccc-CCCCHHHHHHHHH--HhCCcEE
Q 041518 115 PGYGFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVPGYHG-NEQDIDLMKSEAA--KIGYPIL 191 (765)
Q Consensus 115 pg~g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~~~~~-~~~s~~e~~~~~~--~ig~PvV 191 (765)
...-. ..+..++..+.++|.+++.-.|-+.. ..+=..+.+++++.|+..--++.. .......+.+.++ .+|-+..
T Consensus 70 i~tp~-~~H~~~~~~al~aGk~Vl~EKP~a~~-~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~~ 147 (387)
T 3moi_A 70 IASPH-QFHCEHVVQASEQGLHIIVEKPLTLS-RDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQEGSVGRVSM 147 (387)
T ss_dssp ECSCG-GGHHHHHHHHHHTTCEEEECSCCCSC-HHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHHCTTCCEEE
T ss_pred EcCCc-HHHHHHHHHHHHCCCceeeeCCccCC-HHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHhcCCCCCeEE
Confidence 76422 23356677788889887643221110 111123455667777764322211 1112345555554 3676666
Q ss_pred Eee
Q 041518 192 IKP 194 (765)
Q Consensus 192 VKP 194 (765)
+..
T Consensus 148 ~~~ 150 (387)
T 3moi_A 148 LNC 150 (387)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 442
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=61.06 E-value=30 Score=36.06 Aligned_cols=73 Identities=14% Similarity=0.047 Sum_probs=47.9
Q ss_pred EEEEEc-CcHHHHHHHHHHHHC-CCeEEEEecCCCCCC-ccc-ccc---c-EEEEcCCCCcCcCCCCHHHHHHHHHHhCC
Q 041518 39 KILIAN-RGEIAYRIMRTAKRL-GIRTVAVYSDADRDS-LHV-KSA---D-EAIRIGPPPARLSYLNGSSIVDAAIRTGA 110 (765)
Q Consensus 39 kILI~g-~G~~a~~iiraar~~-Gi~vvav~s~~d~~~-~~~-~~a---D-~~~~i~~~~~~~syld~~~Il~~a~~~~~ 110 (765)
||||+| .|.++..+++.+.+. |++++++........ ... .+. . +.+.. +..|.+.+.+++++.++
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------Dl~d~~~~~~~~~~~~~ 74 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHA-------DICDSAEITRIFEQYQP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEEC-------CTTCHHHHHHHHHHHCC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEEC-------CCCCHHHHHHHHhhcCC
Confidence 699999 589999999999887 799888764321110 011 010 1 12221 44677888888877799
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|+|+-.-+
T Consensus 75 d~vih~A~ 82 (361)
T 1kew_A 75 DAVMHLAA 82 (361)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99886644
No 443
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=60.99 E-value=15 Score=37.10 Aligned_cols=34 Identities=26% Similarity=0.260 Sum_probs=29.1
Q ss_pred CCEEEEEcC---cHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 37 IEKILIANR---GEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~---G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
.|++||.|+ |.++..+++.+.+.|+++++++.+.
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999996 5899999999999999988876554
No 444
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=60.90 E-value=5.7 Score=40.77 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=28.6
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 38 EKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 38 kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
+||||+|+ |.++..+++.+.+.|++++++....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 34 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLS 34 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 38999995 8999999999999999998886543
No 445
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=60.88 E-value=16 Score=37.24 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=27.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .+.++..+++.+.+.|++++++..+
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36899999 4689999999999999998887654
No 446
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=60.86 E-value=6.7 Score=41.71 Aligned_cols=71 Identities=13% Similarity=0.062 Sum_probs=46.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-cc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KS-ADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
-++|||.|.|.++..+++.|+.+|.+++++..+++...... ++ +|..+. |.+.+.+.++. .++|.|+
T Consensus 181 g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~---------~~~~~~~~~~~--~g~D~vi 249 (357)
T 2cf5_A 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVI---------GSDQAKMSELA--DSLDYVI 249 (357)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEE---------TTCHHHHHHST--TTEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeec---------cccHHHHHHhc--CCCCEEE
Confidence 46999999999999999999999999888776544321111 12 454442 23444444332 3789998
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-..|
T Consensus 250 d~~g 253 (357)
T 2cf5_A 250 DTVP 253 (357)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6655
No 447
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=60.83 E-value=25 Score=37.35 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=29.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
-|+|.|+|-|.++..+++.++.+|+++++.+..+
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~ 181 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAY 181 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCeEEEEecCHHHHHHHHHHhhCCCEEEEECCCh
Confidence 4799999999999999999999999987765443
No 448
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=60.79 E-value=10 Score=40.02 Aligned_cols=91 Identities=16% Similarity=0.104 Sum_probs=55.8
Q ss_pred CCCEEEEEcCc-HHHHHHHHHHHHC--CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCE
Q 041518 36 RIEKILIANRG-EIAYRIMRTAKRL--GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQA 112 (765)
Q Consensus 36 ~~kkILI~g~G-~~a~~iiraar~~--Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~Da 112 (765)
.+-||.|+|.| .++...++++++. +++++++.. .+.. ....+++++ +. ..-|.|.+.+++ ..++|+
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d-~~~~-~~~~~a~~~---~~---~~~~~~~~~ll~---~~~vD~ 85 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTS-RTRS-HAEEFAKMV---GN---PAVFDSYEELLE---SGLVDA 85 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEEC-SSHH-HHHHHHHHH---SS---CEEESCHHHHHH---SSCCSE
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEc-CCHH-HHHHHHHHh---CC---CcccCCHHHHhc---CCCCCE
Confidence 34599999999 6888888999887 578877763 3321 111222221 10 112566566553 467999
Q ss_pred EEeCCCcccccHHHHHHHHHCCCcEE
Q 041518 113 IHPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 113 V~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
|+..... ..+..++..+.+.|..++
T Consensus 86 V~i~tp~-~~H~~~~~~al~aGkhVl 110 (340)
T 1zh8_A 86 VDLTLPV-ELNLPFIEKALRKGVHVI 110 (340)
T ss_dssp EEECCCG-GGHHHHHHHHHHTTCEEE
T ss_pred EEEeCCc-hHHHHHHHHHHHCCCcEE
Confidence 9876421 233566777778888766
No 449
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=60.79 E-value=24 Score=37.93 Aligned_cols=75 Identities=8% Similarity=-0.055 Sum_probs=46.4
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCC-CeEEEEecCCCCCCcccc-c-------ccEEEEcCCCCcCcCCCCHHHHHHHHH
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLG-IRTVAVYSDADRDSLHVK-S-------ADEAIRIGPPPARLSYLNGSSIVDAAI 106 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~G-i~vvav~s~~d~~~~~~~-~-------aD~~~~i~~~~~~~syld~~~Il~~a~ 106 (765)
.|+|||+| .|.++..+++.+.+.| ++++++..+.+....... + ......+. -+..|.+.+..+..
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~-----~Dl~d~~~~~~~~~ 109 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFA-----LDIGSIEYDAFIKA 109 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEEC-----CCTTSHHHHHHHHH
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEE-----EeCCCHHHHHHHHH
Confidence 47999999 6899999999999999 687776543211100000 0 01222221 24566666665555
Q ss_pred HhCCCEEEeC
Q 041518 107 RTGAQAIHPG 116 (765)
Q Consensus 107 ~~~~DaV~pg 116 (765)
..++|.|+-.
T Consensus 110 ~~~~D~Vih~ 119 (399)
T 3nzo_A 110 DGQYDYVLNL 119 (399)
T ss_dssp CCCCSEEEEC
T ss_pred hCCCCEEEEC
Confidence 6789998855
No 450
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=60.72 E-value=15 Score=38.81 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=29.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
-++|.|+|-|.++..+++.++.+|+++++.+...
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~ 178 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYP 178 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCc
Confidence 4799999999999999999999999987765443
No 451
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=60.62 E-value=17 Score=38.30 Aligned_cols=104 Identities=20% Similarity=0.144 Sum_probs=57.2
Q ss_pred CCCEEEEEcCc-----HH--HHHHHHHHHHCCCeEEEEecC------CCCCCcccccccEEEEcCC-----CCcC--cCC
Q 041518 36 RIEKILIANRG-----EI--AYRIMRTAKRLGIRTVAVYSD------ADRDSLHVKSADEAIRIGP-----PPAR--LSY 95 (765)
Q Consensus 36 ~~kkILI~g~G-----~~--a~~iiraar~~Gi~vvav~s~------~d~~~~~~~~aD~~~~i~~-----~~~~--~sy 95 (765)
|||||.|+-+| -. -+.+++++...|++++.+..- .+-........+.....+. .... .+.
T Consensus 1 m~k~i~IltsGGdapGmNaair~vv~~a~~~g~~v~Gi~~G~~GL~~~~~~~l~~~~v~~i~~~GGt~LGssR~~~~~~~ 80 (320)
T 1pfk_A 1 MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDE 80 (320)
T ss_dssp CCCEEEEEECSSCCTTHHHHHHHHHHHHHHTTCEEEEESTHHHHHHTTCEEEECSGGGTTCTTCCSCTTCCCCCGGGGSH
T ss_pred CCCEEEEEccCCCchhHHHHHHHHHHHHHHCCCEEEEEecChHHhcCCCEEECCHHHHhhHHhCCCCeeccCCCCCCCCH
Confidence 57999999765 22 367788888899998887521 0000000000010011111 1100 011
Q ss_pred CCHHHHHHHHHHhCCCEEEeCCCcccccHHHHHHHHHCCCcEECCc
Q 041518 96 LNGSSIVDAAIRTGAQAIHPGYGFLSESADFAQLCGDNGLTFIGPP 141 (765)
Q Consensus 96 ld~~~Il~~a~~~~~DaV~pg~g~lsE~~~~a~~~~~~Gl~~~Gp~ 141 (765)
...+++++.++++++|+++.--|.-+ ..-+..+.+.+++++|-|
T Consensus 81 ~~~~~~~~~l~~~~Id~LvvIGGdgS--~~~a~~L~~~~i~vvgiP 124 (320)
T 1pfk_A 81 NIRAVAIENLKKRGIDALVVIGGDGS--YMGAMRLTEMGFPCIGLP 124 (320)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECHHH--HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCch--HHHHHHHHhhCCCEEEEe
Confidence 13578888899999998765433222 344666677899988744
No 452
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=60.59 E-value=8.2 Score=41.00 Aligned_cols=77 Identities=18% Similarity=0.139 Sum_probs=48.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCe-EEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHH----hCCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIR-TVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIR----TGAQ 111 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~-vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~----~~~D 111 (765)
-++|||.|.|.++..+++.||.+|.+ ++++..++.......+++|..+.... +..+.+.+.+.+++ .++|
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~-----~~~~~~~~~~~v~~~t~g~g~D 254 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKV-----ERLSAEESAKKIVESFGGIEPA 254 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEEC-----CSCCHHHHHHHHHHHTSSCCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccc-----cccchHHHHHHHHHHhCCCCCC
Confidence 46899999999999999999999998 77776554333233333544332111 01223444444433 4799
Q ss_pred EEEeCCC
Q 041518 112 AIHPGYG 118 (765)
Q Consensus 112 aV~pg~g 118 (765)
.|+-..|
T Consensus 255 vvid~~g 261 (363)
T 3m6i_A 255 VALECTG 261 (363)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9996654
No 453
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=60.52 E-value=8.3 Score=41.15 Aligned_cols=72 Identities=15% Similarity=0.129 Sum_probs=47.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-cc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KS-ADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
-++|||.|.|.++..+++.|+.+|.+++++..+++...... ++ +|..+. |.+.+.+.++. .++|.|+
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~---------~~~~~~~~~~~--~~~D~vi 256 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLV---------SRDQEQMQAAA--GTLDGII 256 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEE---------TTCHHHHHHTT--TCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEe---------ccCHHHHHHhh--CCCCEEE
Confidence 46999999999999999999999999888765443321111 11 454432 23444444433 3789998
Q ss_pred eCCCc
Q 041518 115 PGYGF 119 (765)
Q Consensus 115 pg~g~ 119 (765)
-..|.
T Consensus 257 d~~g~ 261 (366)
T 1yqd_A 257 DTVSA 261 (366)
T ss_dssp ECCSS
T ss_pred ECCCc
Confidence 76553
No 454
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=60.51 E-value=34 Score=36.88 Aligned_cols=126 Identities=13% Similarity=0.143 Sum_probs=68.6
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHC-C-CeEEEEecCCCCCCccc---ccccEEEEcCCCCc------------CcCCCCH
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRL-G-IRTVAVYSDADRDSLHV---KSADEAIRIGPPPA------------RLSYLNG 98 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~-G-i~vvav~s~~d~~~~~~---~~aD~~~~i~~~~~------------~~syld~ 98 (765)
|+||.|+|. |.++...++.+++. + ++++++..+.+...... .+--..+.+..... .+-+...
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~v~~g~ 83 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA 83 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcEEEeCc
Confidence 589999999 99998888888886 3 88887755433210000 00001111110000 0001124
Q ss_pred HHHHHHHHHhCCCEEEeCC-CcccccHHHHHHHHHCCCcEECCcHHHHHHhcCHHHHHHHHHHCCCCCCC
Q 041518 99 SSIVDAAIRTGAQAIHPGY-GFLSESADFAQLCGDNGLTFIGPPVSAIRDMGDKSASKRIMGAAGVPLVP 167 (765)
Q Consensus 99 ~~Il~~a~~~~~DaV~pg~-g~lsE~~~~a~~~~~~Gl~~~Gp~~eai~~~~DK~~~r~~l~~~Gvpvp~ 167 (765)
+.+.+++... +|.|+-.. |... ........+.|-.++-.+.+++... =..+.++++++|+...|
T Consensus 84 ~~~~el~~~~-iDvVV~ai~G~aG--l~ptlaAi~aGK~VvlANKE~lv~~--G~~l~~~A~~~gv~liP 148 (388)
T 1r0k_A 84 DALVEAAMMG-ADWTMAAIIGCAG--LKATLAAIRKGKTVALANKESLVSA--GGLMIDAVREHGTTLLP 148 (388)
T ss_dssp HHHHHHHTSC-CSEEEECCCSGGG--HHHHHHHHHTTSEEEECCSHHHHTT--HHHHHHHHHHHTCEEEE
T ss_pred cHHHHHHcCC-CCEEEEeCCCHHH--HHHHHHHHHCCCEEEEeCcHHHHhh--HHHHHHHHHHcCCEEEE
Confidence 5666777666 99999876 5332 3344555678887775555543332 23344556666665533
No 455
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=60.51 E-value=9.9 Score=38.97 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=28.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEe
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~ 67 (765)
++||.|+|.|.++..+++.+.+.|++|++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 6899999999999999999999999977754
No 456
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=60.47 E-value=7.6 Score=41.85 Aligned_cols=33 Identities=18% Similarity=0.094 Sum_probs=28.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHH---CCCeEEEEecC
Q 041518 37 IEKILIANRGEIAYRIMRTAKR---LGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~---~Gi~vvav~s~ 69 (765)
|++|+|+|+|..++.++..+++ .|+++.++..+
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~ 36 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKS 36 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCC
Confidence 5799999999999999999999 89998888654
No 457
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=60.38 E-value=5.6 Score=40.96 Aligned_cols=33 Identities=12% Similarity=-0.039 Sum_probs=29.5
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
+++|+|+|+|..++.++..+++.|++++++...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcC
Confidence 579999999999999999999999998887654
No 458
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=60.30 E-value=30 Score=34.84 Aligned_cols=70 Identities=10% Similarity=0.056 Sum_probs=44.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHH-----hCC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIR-----TGA 110 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~-----~~~ 110 (765)
-|++||.|+ |.++..+++.+.+.|+++++++.+...... + ..+ ..+..+.+.+.+++++ -++
T Consensus 28 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----~--~~~-----~~Dv~~~~~~~~~~~~~~~~~g~i 95 (266)
T 3uxy_A 28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----D--LHL-----PGDLREAAYADGLPGAVAAGLGRL 95 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----S--EEC-----CCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----h--hcc-----CcCCCCHHHHHHHHHHHHHhcCCC
Confidence 478999994 689999999999999998876544322111 1 111 1233555555544443 278
Q ss_pred CEEEeCCC
Q 041518 111 QAIHPGYG 118 (765)
Q Consensus 111 DaV~pg~g 118 (765)
|.++-.-|
T Consensus 96 D~lvnnAg 103 (266)
T 3uxy_A 96 DIVVNNAG 103 (266)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99886543
No 459
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=60.26 E-value=14 Score=37.06 Aligned_cols=33 Identities=18% Similarity=0.143 Sum_probs=28.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 37899999 4689999999999999998887644
No 460
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=60.17 E-value=16 Score=36.27 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=28.4
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.|+ |.++..+++.+.+.|++++++..+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 479999994 689999999999999998887644
No 461
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=60.10 E-value=11 Score=38.40 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=28.3
Q ss_pred EEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 39 KILIANR-GEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 39 kILI~g~-G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
||||+|+ |.++..+++.+.+.|++|+++..++
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 6999995 9999999999999999999886543
No 462
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=59.97 E-value=50 Score=34.64 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=29.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
-|+|.|+|-|.++..+++.++.+|+++++.+.++
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~ 170 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTG 170 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 4799999999999999999999999988765443
No 463
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=59.97 E-value=6.7 Score=38.65 Aligned_cols=32 Identities=13% Similarity=0.148 Sum_probs=28.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~ 67 (765)
+|+||.|+|.|.++..+++.+.+.|+++++++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~ 53 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIAN 53 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEE
Confidence 35789999999999999999999999977644
No 464
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=59.92 E-value=23 Score=34.80 Aligned_cols=33 Identities=18% Similarity=0.100 Sum_probs=28.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.|+ |.++..+++.+.+.|++++++..+
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 478999994 689999999999999998887654
No 465
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=59.64 E-value=16 Score=39.38 Aligned_cols=96 Identities=17% Similarity=0.128 Sum_probs=56.8
Q ss_pred CEEEEEcCcH---HHHHHHHHHHHCC-CeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHH--HhCCC
Q 041518 38 EKILIANRGE---IAYRIMRTAKRLG-IRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAI--RTGAQ 111 (765)
Q Consensus 38 kkILI~g~G~---~a~~iiraar~~G-i~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~--~~~~D 111 (765)
-||.|+|.|. ++...+++++..+ ++++++..+.+.. ....++++ +-++ ...-|.|.+.+++--+ ..++|
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~-~a~~~a~~-~g~~---~~~~~~~~~~ll~~~~~~~~~vD 87 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPI-RGSAFGEQ-LGVD---SERCYADYLSMFEQEARRADGIQ 87 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHH-HHHHHHHH-TTCC---GGGBCSSHHHHHHHHTTCTTCCS
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHH-HHHHHHHH-hCCC---cceeeCCHHHHHhcccccCCCCC
Confidence 3899999998 8777777777765 7777622333332 11222322 1111 1134777777776421 14599
Q ss_pred EEEeCCCcccccHHHHHHHHHCCCcEEC
Q 041518 112 AIHPGYGFLSESADFAQLCGDNGLTFIG 139 (765)
Q Consensus 112 aV~pg~g~lsE~~~~a~~~~~~Gl~~~G 139 (765)
+|+...-. .-+..++..+.++|..++.
T Consensus 88 ~V~i~tp~-~~H~~~~~~al~aGkhVl~ 114 (398)
T 3dty_A 88 AVSIATPN-GTHYSITKAALEAGLHVVC 114 (398)
T ss_dssp EEEEESCG-GGHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCc-HHHHHHHHHHHHCCCeEEE
Confidence 99866421 1235667777788988773
No 466
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=59.60 E-value=27 Score=35.87 Aligned_cols=82 Identities=9% Similarity=0.005 Sum_probs=51.9
Q ss_pred CEEEEEcCcHHHHHHHHHHHH----CCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEE
Q 041518 38 EKILIANRGEIAYRIMRTAKR----LGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAI 113 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~----~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV 113 (765)
-||.|+|.|.++...++.+.+ .+++++++.+. +. .++.. +. .|.+.+.++ ...++|+|
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~-~~------~a~~~---g~-----~~~~~~ell---~~~~vD~V 69 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSR-RE------LGSLD---EV-----RQISLEDAL---RSQEIDVA 69 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECS-SC------CCEET---TE-----EBCCHHHHH---HCSSEEEE
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECc-hH------HHHHc---CC-----CCCCHHHHh---cCCCCCEE
Confidence 489999999998888877764 47888887643 22 12110 10 134555554 35679999
Q ss_pred EeCCCcccccHHHHHHHHHCCCcEE
Q 041518 114 HPGYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 114 ~pg~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
+..... ..+...+..+.+.|.+++
T Consensus 70 ~i~tp~-~~H~~~~~~al~aGkhVl 93 (294)
T 1lc0_A 70 YICSES-SSHEDYIRQFLQAGKHVL 93 (294)
T ss_dssp EECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred EEeCCc-HhHHHHHHHHHHCCCcEE
Confidence 876422 233566677777888766
No 467
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=59.55 E-value=7.4 Score=40.56 Aligned_cols=83 Identities=10% Similarity=-0.010 Sum_probs=48.8
Q ss_pred CEEEEEcCcHHHHHHHHHHHH-CCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEeC
Q 041518 38 EKILIANRGEIAYRIMRTAKR-LGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHPG 116 (765)
Q Consensus 38 kkILI~g~G~~a~~iiraar~-~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~pg 116 (765)
-||.|+|.|.++..+++.+++ -++++++++. .++... .. .+.. ..+|.+ +++. .++|+|+..
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d-~~~~~~-----~~---~g~~--~~~~~~---l~~~---~~~DvViia 72 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVR-RNPAEV-----PF---ELQP--FRVVSD---IEQL---ESVDVALVC 72 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC-C---------------CCTT--SCEESS---GGGS---SSCCEEEEC
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEc-CCHHHH-----HH---cCCC--cCCHHH---HHhC---CCCCEEEEC
Confidence 499999999999999999988 4788887653 333211 11 1110 112332 3322 578999866
Q ss_pred CCcccccHHHHHHHHHCCCcEE
Q 041518 117 YGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 117 ~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
... ..+...+..+.+.|..++
T Consensus 73 tp~-~~h~~~~~~al~aG~~Vi 93 (304)
T 3bio_A 73 SPS-REVERTALEILKKGICTA 93 (304)
T ss_dssp SCH-HHHHHHHHHHHTTTCEEE
T ss_pred CCc-hhhHHHHHHHHHcCCeEE
Confidence 421 122455666677788777
No 468
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=59.55 E-value=11 Score=37.90 Aligned_cols=70 Identities=11% Similarity=0.163 Sum_probs=45.2
Q ss_pred EEEEEcC-cHHHHHHHHHHHHC--CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 39 KILIANR-GEIAYRIMRTAKRL--GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 39 kILI~g~-G~~a~~iiraar~~--Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
||||+|+ |.++..+++.+.+. |++++++..++.........--+.+.. ++.|.+.+.++++ ++|+|+-
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------D~~d~~~~~~~~~--~~d~vi~ 71 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQA-------DYGDEAALTSALQ--GVEKLLL 71 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEEC-------CTTCHHHHHHHTT--TCSEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEc-------CCCCHHHHHHHHh--CCCEEEE
Confidence 5899995 89999999999998 999988875543311000000122222 4567777777663 6898875
Q ss_pred CC
Q 041518 116 GY 117 (765)
Q Consensus 116 g~ 117 (765)
.-
T Consensus 72 ~a 73 (286)
T 2zcu_A 72 IS 73 (286)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 469
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=59.47 E-value=7.7 Score=38.55 Aligned_cols=78 Identities=15% Similarity=0.083 Sum_probs=48.5
Q ss_pred CCCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-ccccEEEEcCCCCcCcCCCCHHHHHHHHHHh-CCCE
Q 041518 36 RIEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KSADEAIRIGPPPARLSYLNGSSIVDAAIRT-GAQA 112 (765)
Q Consensus 36 ~~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~aD~~~~i~~~~~~~syld~~~Il~~a~~~-~~Da 112 (765)
.-|++||.| .|.++..+++.+.+.|++++++..+.+...... .+.+....+ .-+..+.+.+.++.++. ++|.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-----~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE-----VCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEE-----ECCTTSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEE-----EcCCCCHHHHHHHHHhcCCCCE
Confidence 358999999 568999999999999999888765432110000 111111111 11346677777777665 6898
Q ss_pred EEeCCC
Q 041518 113 IHPGYG 118 (765)
Q Consensus 113 V~pg~g 118 (765)
++-.-|
T Consensus 88 li~~Ag 93 (249)
T 3f9i_A 88 LVCNAG 93 (249)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 886544
No 470
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=59.47 E-value=52 Score=34.00 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=56.3
Q ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhC-CCEEEe
Q 041518 38 EKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTG-AQAIHP 115 (765)
Q Consensus 38 kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~-~DaV~p 115 (765)
.+++|+|. |..+..+++.+.+.|++.+. ..++... ........ -|.+.+.+. ++.+ +|+++.
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~~v~-~VnP~~~--g~~i~G~~----------vy~sl~el~---~~~~~~DvaIi 77 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTKVVA-GVTPGKG--GSEVHGVP----------VYDSVKEAL---AEHPEINTSIV 77 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEE-EECTTCT--TCEETTEE----------EESSHHHHH---HHCTTCCEEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCcEEE-EeCCCCC--CceECCEe----------eeCCHHHHh---hcCCCCCEEEE
Confidence 48888895 77888899999999998432 2233321 11111111 244544443 2334 787664
Q ss_pred CCCcccccHHHHHHHHHCCCc-EE-CC---cHHHHHHhcCHHHHHHHHHHCCCC
Q 041518 116 GYGFLSESADFAQLCGDNGLT-FI-GP---PVSAIRDMGDKSASKRIMGAAGVP 164 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~-~~-Gp---~~eai~~~~DK~~~r~~l~~~Gvp 164 (765)
..-. .......+.|.+.|++ ++ .. +.+ +....++++++.|+.
T Consensus 78 ~vp~-~~~~~~v~ea~~~Gi~~vVi~t~G~~~~------~~~~l~~~A~~~gi~ 124 (297)
T 2yv2_A 78 FVPA-PFAPDAVYEAVDAGIRLVVVITEGIPVH------DTMRFVNYARQKGAT 124 (297)
T ss_dssp CCCG-GGHHHHHHHHHHTTCSEEEECCCCCCHH------HHHHHHHHHHHHTCE
T ss_pred ecCH-HHHHHHHHHHHHCCCCEEEEECCCCCHH------HHHHHHHHHHHcCCE
Confidence 3211 1114556667777777 22 22 221 245566777777773
No 471
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=59.25 E-value=18 Score=36.03 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=28.3
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.|+ |.++..+++.+.+.|++++++..+
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 478999994 789999999999999998887654
No 472
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=59.20 E-value=21 Score=37.58 Aligned_cols=33 Identities=9% Similarity=0.009 Sum_probs=29.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
-++|.|+|-|.++..+++.++.+|+++++.+..
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~ 178 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVF 178 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCC
Confidence 479999999999999999999999997766543
No 473
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=59.19 E-value=21 Score=35.69 Aligned_cols=34 Identities=12% Similarity=0.088 Sum_probs=28.9
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDA 70 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~ 70 (765)
.|++||.|+ +.++..+++.+.+.|+++++++.+.
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 478999994 5799999999999999988876543
No 474
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=59.18 E-value=14 Score=37.31 Aligned_cols=33 Identities=12% Similarity=0.041 Sum_probs=28.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5689999999999999998887654
No 475
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=59.07 E-value=13 Score=37.23 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=28.2
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 37899999 5789999999999999998887644
No 476
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=58.96 E-value=14 Score=37.53 Aligned_cols=75 Identities=8% Similarity=0.030 Sum_probs=45.8
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCCCCCccc-cccc--EEEEcCCCCcCcCCCCHHHHHHHHHHh----
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDADRDSLHV-KSAD--EAIRIGPPPARLSYLNGSSIVDAAIRT---- 108 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~-~~aD--~~~~i~~~~~~~syld~~~Il~~a~~~---- 108 (765)
.|++||.| .+.++..+++.+.+.|+++++++.+.+...... .+.. ..+.. +..|.+.+.+++++.
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------Dv~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPT-------DVTDPDSVRALFTATVEKF 100 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEEC-------CTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEe-------cCCCHHHHHHHHHHHHHHc
Confidence 47899999 468999999999999999888765432110000 0001 12222 335556665555443
Q ss_pred -CCCEEEeCCC
Q 041518 109 -GAQAIHPGYG 118 (765)
Q Consensus 109 -~~DaV~pg~g 118 (765)
++|.++-.-|
T Consensus 101 g~iD~lVnnAg 111 (272)
T 4dyv_A 101 GRVDVLFNNAG 111 (272)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 7999886543
No 477
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=58.95 E-value=9.3 Score=39.70 Aligned_cols=32 Identities=9% Similarity=0.035 Sum_probs=28.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~ 67 (765)
+++||.|+|.|.++..+++.+.+.|+++++.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~d 39 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWN 39 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 46789999999999999999999999976643
No 478
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=58.87 E-value=4.7 Score=42.93 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=46.2
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCccccc-ccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKS-ADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIH 114 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~-aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~ 114 (765)
-++|||.|.|.++..+++.|+.+ |.+++++..+++......++ +|+.+... +. ..+.+.++....++|.|+
T Consensus 187 g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~-----~~--~~~~v~~~~~g~g~Dvvi 259 (359)
T 1h2b_A 187 GAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR-----RD--PVKQVMELTRGRGVNVAM 259 (359)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT-----SC--HHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEecc-----ch--HHHHHHHHhCCCCCcEEE
Confidence 46999999999999999999999 99988876543321111122 45554311 11 123333333223789998
Q ss_pred eCCC
Q 041518 115 PGYG 118 (765)
Q Consensus 115 pg~g 118 (765)
-..|
T Consensus 260 d~~G 263 (359)
T 1h2b_A 260 DFVG 263 (359)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 6654
No 479
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=58.79 E-value=43 Score=33.94 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=29.5
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecCCC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSDAD 71 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~~d 71 (765)
.|++||.|+ +.++..+++.+.+.|+++++++.+..
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~ 44 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAE 44 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChh
Confidence 479999994 67999999999999999888876544
No 480
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=58.75 E-value=16 Score=36.99 Aligned_cols=33 Identities=12% Similarity=0.082 Sum_probs=28.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|+++++++.+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 44 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN 44 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999 4689999999999999998887644
No 481
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=58.74 E-value=20 Score=37.66 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=31.1
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecCCCC
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVYSDADR 72 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~~d~ 72 (765)
.-++|||.|.|.++..+++.|+.+|.+++++..++..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~ 212 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHK 212 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 3479999999999999999999999998887655443
No 482
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=58.72 E-value=71 Score=32.03 Aligned_cols=33 Identities=9% Similarity=-0.049 Sum_probs=28.5
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
-|++||.| .+.++..+++.+.+.|+++++++.+
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 37999999 5689999999999999998887654
No 483
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=58.71 E-value=38 Score=33.81 Aligned_cols=69 Identities=13% Similarity=0.086 Sum_probs=44.4
Q ss_pred CEEEEEcC-----------------cHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHH
Q 041518 38 EKILIANR-----------------GEIAYRIMRTAKRLGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSS 100 (765)
Q Consensus 38 kkILI~g~-----------------G~~a~~iiraar~~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~ 100 (765)
|+|||.|+ |.++..+++++.++|.+|++++.............+ .+ +....+.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~-~~---------~v~s~~e 73 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNLS-IR---------EITNTKD 73 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEE-EE---------ECCSHHH
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCeE-EE---------EHhHHHH
Confidence 68888877 478999999999999999998865432111000111 12 1245566
Q ss_pred HHHHHHHh--CCCEEEeC
Q 041518 101 IVDAAIRT--GAQAIHPG 116 (765)
Q Consensus 101 Il~~a~~~--~~DaV~pg 116 (765)
+++.+.+. ++|.++-.
T Consensus 74 m~~~v~~~~~~~Dili~a 91 (232)
T 2gk4_A 74 LLIEMQERVQDYQVLIHS 91 (232)
T ss_dssp HHHHHHHHGGGCSEEEEC
T ss_pred HHHHHHHhcCCCCEEEEc
Confidence 66666553 58888744
No 484
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=58.64 E-value=14 Score=36.39 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=28.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999998887654
No 485
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=58.64 E-value=9.4 Score=40.12 Aligned_cols=33 Identities=12% Similarity=0.004 Sum_probs=28.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.++|+|+|+|..++.++..+++.|+++.++...
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESM 46 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence 358999999999999999999999998887644
No 486
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=58.55 E-value=12 Score=38.20 Aligned_cols=33 Identities=12% Similarity=0.040 Sum_probs=27.7
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|+++++++.+
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 66 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR 66 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999 4689999999999999998887654
No 487
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=58.51 E-value=25 Score=35.60 Aligned_cols=33 Identities=24% Similarity=0.271 Sum_probs=28.2
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.|+ +.++..+++.+.+.|+++++++.+
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 479999995 579999999999999998887654
No 488
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=58.37 E-value=12 Score=39.21 Aligned_cols=33 Identities=15% Similarity=0.285 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCcHHHHHHHHHHHHCCC--eEEEEe
Q 041518 35 QRIEKILIANRGEIAYRIMRTAKRLGI--RTVAVY 67 (765)
Q Consensus 35 ~~~kkILI~g~G~~a~~iiraar~~Gi--~vvav~ 67 (765)
+|++||.|+|.|.++..+++.+++.|+ ++++++
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~d 65 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYD 65 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEE
Confidence 356899999999999999999999999 766654
No 489
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=58.33 E-value=32 Score=33.83 Aligned_cols=71 Identities=8% Similarity=0.083 Sum_probs=44.8
Q ss_pred CCEEEEEcC-cHHHHHHHHHHHH-CCCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHh---CCC
Q 041518 37 IEKILIANR-GEIAYRIMRTAKR-LGIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRT---GAQ 111 (765)
Q Consensus 37 ~kkILI~g~-G~~a~~iiraar~-~Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~---~~D 111 (765)
+|++||.|+ +.++..+++.+.+ .|..++++..+........ ..+.. +..|.+.+.++++.. ++|
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~----~~~~~-------Dv~~~~~v~~~~~~~~~~~id 72 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL----KFIKA-------DLTKQQDITNVLDIIKNVSFD 72 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE----EEEEC-------CTTCHHHHHHHHHHTTTCCEE
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc----eEEec-------CcCCHHHHHHHHHHHHhCCCC
Confidence 689999994 6799999999988 7888777665433111111 23333 235666666666433 678
Q ss_pred EEEeCCC
Q 041518 112 AIHPGYG 118 (765)
Q Consensus 112 aV~pg~g 118 (765)
.++-.-|
T Consensus 73 ~lv~nAg 79 (244)
T 4e4y_A 73 GIFLNAG 79 (244)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 8775433
No 490
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=58.28 E-value=25 Score=36.61 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=28.9
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
-++|.|+|-|.++..+++.++.+|+++++++.+
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~ 174 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANALGMNILLYDPY 174 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CceEEEEccCHHHHHHHHHHHHCCCEEEEECCC
Confidence 479999999999999999999999998766543
No 491
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=58.28 E-value=12 Score=40.03 Aligned_cols=76 Identities=13% Similarity=0.087 Sum_probs=45.7
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCC-eEEEEecCCCCCCccccc-ccEEEEcCCCCcCcCCCC-HHHHHHHHHHhCCCEE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGI-RTVAVYSDADRDSLHVKS-ADEAIRIGPPPARLSYLN-GSSIVDAAIRTGAQAI 113 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi-~vvav~s~~d~~~~~~~~-aD~~~~i~~~~~~~syld-~~~Il~~a~~~~~DaV 113 (765)
-++|||.|.|.++..+++.|+.+|. +++++..++.......++ +|..+. .. +.-.+ .+.+.++.. .++|.|
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~--~~---~~~~~~~~~v~~~~~-~g~Dvv 269 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLN--PR---ELDKPVQDVITELTA-GGVDYS 269 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEEC--GG---GCSSCHHHHHHHHHT-SCBSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEc--cc---cccchHHHHHHHHhC-CCccEE
Confidence 4699999999999999999999999 677775443332111122 454432 11 00012 233444333 379999
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+-..|
T Consensus 270 id~~G 274 (376)
T 1e3i_A 270 LDCAG 274 (376)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 96654
No 492
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=58.23 E-value=11 Score=40.06 Aligned_cols=33 Identities=9% Similarity=0.050 Sum_probs=28.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHH-CC-CeEEEEecC
Q 041518 37 IEKILIANRGEIAYRIMRTAKR-LG-IRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~-~G-i~vvav~s~ 69 (765)
..+|+|+|+|..++.++..|.+ .| ++|+++...
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~ 55 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKG 55 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 4589999999999999999999 89 998887654
No 493
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=58.21 E-value=15 Score=38.61 Aligned_cols=89 Identities=13% Similarity=0.113 Sum_probs=54.4
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHC-CCeEEEEecCCCCCCcccccccEEEEcCCCCcCcCCCCHHHHHHHHHHhCCCEEEe
Q 041518 37 IEKILIANRGEIAYRIMRTAKRL-GIRTVAVYSDADRDSLHVKSADEAIRIGPPPARLSYLNGSSIVDAAIRTGAQAIHP 115 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~-Gi~vvav~s~~d~~~~~~~~aD~~~~i~~~~~~~syld~~~Il~~a~~~~~DaV~p 115 (765)
+.||.|+|.|.++...++.+++. ++++++++. .+.. ....+++.. + ...|.+.+.++ ...++|+|+.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d-~~~~-~~~~~a~~~---g----~~~~~~~~~~l---~~~~~D~V~i 71 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIAD-PFIE-GAQRLAEAN---G----AEAVASPDEVF---ARDDIDGIVI 71 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEEC-SSHH-HHHHHHHTT---T----CEEESSHHHHT---TCSCCCEEEE
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEEC-CCHH-HHHHHHHHc---C----CceeCCHHHHh---cCCCCCEEEE
Confidence 35899999999999999999987 788887753 2321 111122210 1 11245555544 3467899886
Q ss_pred CCCcccccHHHHHHHHHCCCcEE
Q 041518 116 GYGFLSESADFAQLCGDNGLTFI 138 (765)
Q Consensus 116 g~g~lsE~~~~a~~~~~~Gl~~~ 138 (765)
.... ..+...+..+.+.|..++
T Consensus 72 ~tp~-~~h~~~~~~al~~gk~v~ 93 (344)
T 3euw_A 72 GSPT-STHVDLITRAVERGIPAL 93 (344)
T ss_dssp CSCG-GGHHHHHHHHHHTTCCEE
T ss_pred eCCc-hhhHHHHHHHHHcCCcEE
Confidence 6421 223555666677777665
No 494
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=58.18 E-value=34 Score=38.16 Aligned_cols=35 Identities=11% Similarity=0.160 Sum_probs=30.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecCCC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSDAD 71 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~~d 71 (765)
++||||+| .|.++..+++.+.+.|++|+++..+..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~ 182 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP 182 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 45899999 689999999999999999998875543
No 495
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=58.10 E-value=11 Score=38.00 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=28.2
Q ss_pred CCEEEEEcC---cHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIANR---GEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g~---G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.|+ |.++..+++.+.+.|+++++++.+
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCC
Confidence 378999996 589999999999999998887644
No 496
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=58.04 E-value=9.4 Score=40.83 Aligned_cols=76 Identities=20% Similarity=0.197 Sum_probs=46.8
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCC-eEEEEecCCCCCCccccc-ccEEEEcCCCCcCcCCCC-HHHHHHHHHHhCCCEE
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGI-RTVAVYSDADRDSLHVKS-ADEAIRIGPPPARLSYLN-GSSIVDAAIRTGAQAI 113 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi-~vvav~s~~d~~~~~~~~-aD~~~~i~~~~~~~syld-~~~Il~~a~~~~~DaV 113 (765)
-++|||.|.|.++..+++.|+.+|. +++++..++.......++ +|..+. .. +...+ .+.+.++... ++|.|
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~--~~---~~~~~~~~~i~~~~~g-g~D~v 267 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVN--PK---DHDKPIQEVIVDLTDG-GVDYS 267 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEEC--GG---GCSSCHHHHHHHHTTS-CBSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEc--cc---cCchhHHHHHHHhcCC-CCCEE
Confidence 4689999999999999999999999 788876554432222222 454432 11 00122 2334443333 79999
Q ss_pred EeCCC
Q 041518 114 HPGYG 118 (765)
Q Consensus 114 ~pg~g 118 (765)
+-..|
T Consensus 268 id~~g 272 (378)
T 3uko_A 268 FECIG 272 (378)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 96654
No 497
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=57.98 E-value=19 Score=36.23 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=27.1
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEec
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYS 68 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s 68 (765)
.|++||.| .|.++..+++.+.+.|+++++++.
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 47899999 468999999999999999877643
No 498
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=57.85 E-value=10 Score=38.93 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=27.0
Q ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCeEEEEe
Q 041518 36 RIEKILIANRGEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 36 ~~kkILI~g~G~~a~~iiraar~~Gi~vvav~ 67 (765)
||.||+|+|.|.++..++..+.+.|++++++.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGNDVTLID 33 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCcEEEEE
Confidence 34589999999999999999999999877654
No 499
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=57.79 E-value=17 Score=35.82 Aligned_cols=33 Identities=12% Similarity=0.031 Sum_probs=28.3
Q ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEecC
Q 041518 37 IEKILIAN-RGEIAYRIMRTAKRLGIRTVAVYSD 69 (765)
Q Consensus 37 ~kkILI~g-~G~~a~~iiraar~~Gi~vvav~s~ 69 (765)
.|++||.| .|.++..+++.+.+.|++++++..+
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899999 5789999999999999998887654
No 500
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=57.54 E-value=13 Score=42.56 Aligned_cols=31 Identities=19% Similarity=0.387 Sum_probs=28.0
Q ss_pred CCEEEEEcCcHHHHHHHHHHHHCCCeEEEEe
Q 041518 37 IEKILIANRGEIAYRIMRTAKRLGIRTVAVY 67 (765)
Q Consensus 37 ~kkILI~g~G~~a~~iiraar~~Gi~vvav~ 67 (765)
.+||||+|.|..+..+++.+...|+..+.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLv 356 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFV 356 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 4699999999999999999999999877664
Done!