BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041524
(524 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225431257|ref|XP_002274814.1| PREDICTED: CDK5RAP1-like protein-like [Vitis vinifera]
Length = 626
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/524 (79%), Positives = 460/524 (87%), Gaps = 14/524 (2%)
Query: 6 RCARRLTTRQLKRSFSLNLSRNFSHSSLDLP-----DGPGLHHFIAQSSLTASQPLADLA 60
RC R T + FSL SR FS S LP + P LH FIAQ+++ S+ D
Sbjct: 44 RCNLR-TPPPFRPGFSLTFSRKFSQSHSHLPLSNKSEVPSLHSFIAQAAVATSEVQPD-- 100
Query: 61 PASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFI 120
+ SE+ +GRIY ETYGCQMN+NDMEIVLSIMK AGY+EV+ VPE+AEVIFI
Sbjct: 101 ------PVSASEILPRGRIYHETYGCQMNINDMEIVLSIMKKAGYNEVVEVPESAEVIFI 154
Query: 121 NTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILD 180
NTCAIRD AE KVWQRLNYFWFLKR WK NV+ GR+ S HPPK+VVLGCMAERLKDKILD
Sbjct: 155 NTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVSIGRADSLHPPKVVVLGCMAERLKDKILD 214
Query: 181 ADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSV 240
ADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS+
Sbjct: 215 ADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSI 274
Query: 241 MRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGME 300
MRGCNNMCSFCIVPFTRGRERSRPVESIV+EV ELWKEGVKEV LLGQNVNSYND SG +
Sbjct: 275 MRGCNNMCSFCIVPFTRGRERSRPVESIVREVAELWKEGVKEVMLLGQNVNSYNDASGFD 334
Query: 301 KEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
KEVEPGANW+LSEGF+S CKVKKMGLRF+DLLDRLS EFPEMRFRYTSPHPKDFPDELLY
Sbjct: 335 KEVEPGANWKLSEGFSSKCKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDELLY 394
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
+MRDR NVCK IHLPAQTG+S VLERMRRGYTREAYLDLVQKIR+I+PDVG++SDFICGF
Sbjct: 395 LMRDRYNVCKSIHLPAQTGSSTVLERMRRGYTREAYLDLVQKIRRIVPDVGITSDFICGF 454
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGETEEE+ADT++L+KAVGYDMAYMFAYSMRE+THAHRNYVDDVP+ +KQRRL E+IE F
Sbjct: 455 CGETEEEYADTISLVKAVGYDMAYMFAYSMREKTHAHRNYVDDVPDNIKQRRLAEMIEVF 514
Query: 481 RESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
RESTGQCYDSQ+GTVQLVLVEGPNK+APDTEL+GK+DRGHRV+F
Sbjct: 515 RESTGQCYDSQIGTVQLVLVEGPNKRAPDTELIGKTDRGHRVSF 558
>gi|224094881|ref|XP_002310277.1| predicted protein [Populus trichocarpa]
gi|222853180|gb|EEE90727.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/530 (80%), Positives = 467/530 (88%), Gaps = 16/530 (3%)
Query: 7 CARRLTTRQLK-RSFSLNLSRNFSHSSLDL-PDGPGLHHFIAQSSLTA----------SQ 54
C R LK R+ SL LSRNFS S L GPGLHHF+AQ++ +A +Q
Sbjct: 36 CYRHFNKGPLKKRNCSLTLSRNFSQSHLSKNTQGPGLHHFVAQAASSASAPVSASASQTQ 95
Query: 55 PLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPEN 114
P PA EV E+ +GRIY ETYGCQMNVNDMEIVLSIMKNAGYSE+++VPE+
Sbjct: 96 P--QFVPAIEVPPDI--EILPRGRIYHETYGCQMNVNDMEIVLSIMKNAGYSEIVDVPES 151
Query: 115 AEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERL 174
AE+IFINTCAIRD AE KVWQRLNYFWFLKR WK NVA GRSQS HPPK+VVLGCMAERL
Sbjct: 152 AEIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVAIGRSQSHHPPKVVVLGCMAERL 211
Query: 175 KDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSV 234
KDKILDADKMVDVVCGPDAYRDLPRLLEEV+YGQKGINTLLSLEETYADISPVRISKNS+
Sbjct: 212 KDKILDADKMVDVVCGPDAYRDLPRLLEEVEYGQKGINTLLSLEETYADISPVRISKNSI 271
Query: 235 TAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN 294
AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV ELWKEGVKEVTLLGQNVNSYN
Sbjct: 272 NAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVAELWKEGVKEVTLLGQNVNSYN 331
Query: 295 DTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDF 354
D S +EKEVEPG NW+ S+GF+S CKVK++GLRF+DLLDRLS EFPEMRFRYTSPHPKDF
Sbjct: 332 DASEIEKEVEPGTNWKYSDGFSSTCKVKRVGLRFSDLLDRLSTEFPEMRFRYTSPHPKDF 391
Query: 355 PDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSS 414
PD+LLY+MR+R N+CK IHLPAQTG+S VLERMRRGYTREAYLDLVQKIR+IIPDVG++S
Sbjct: 392 PDDLLYVMRNRHNICKSIHLPAQTGSSTVLERMRRGYTREAYLDLVQKIRRIIPDVGITS 451
Query: 415 DFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLT 474
DFICGFCGETEEEH DTL+L+KAVGYDMAYMFAYSMRE+THAHRNYVDDVP+EVK+RRL
Sbjct: 452 DFICGFCGETEEEHQDTLSLVKAVGYDMAYMFAYSMREKTHAHRNYVDDVPDEVKKRRLA 511
Query: 475 ELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
ELIEAFRESTGQC+DSQ+G+VQLVLVEGPNK+APDTEL+GKSDRGHRV F
Sbjct: 512 ELIEAFRESTGQCFDSQIGSVQLVLVEGPNKRAPDTELIGKSDRGHRVLF 561
>gi|356540793|ref|XP_003538869.1| PREDICTED: CDK5RAP1-like protein-like [Glycine max]
Length = 611
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/513 (80%), Positives = 453/513 (88%), Gaps = 19/513 (3%)
Query: 16 LKRSFSLNL---SRNFSHSSLDLPDGPGLH-HFIAQSSLTASQPLADLAPASEVSSATGS 71
L RS LNL SR FS S+ LH HFI Q++LTAS+ P +EV
Sbjct: 53 LPRSRPLNLIIASRTFSPSN-------TLHLHFIPQATLTASEAQPRFVPDTEVPPT--- 102
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
GRIY ETYGCQMNVNDMEIVLSIMKNAGY E+++VPE+AE+IFINTCAIRD AE
Sbjct: 103 -----GRIYHETYGCQMNVNDMEIVLSIMKNAGYGEIVSVPESAEIIFINTCAIRDNAEQ 157
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGP 191
KVWQRLNYFWFLKR WK NVATGRSQS HPPK+VVLGCMAERLK+KILD+DKMVDVVCGP
Sbjct: 158 KVWQRLNYFWFLKRHWKNNVATGRSQSLHPPKVVVLGCMAERLKEKILDSDKMVDVVCGP 217
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
DAYRDLPRLLEEVDYGQKGINTLLSLEETYADI+PVRISKNSVTAFVSVMRGCNNMCSFC
Sbjct: 218 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADINPVRISKNSVTAFVSVMRGCNNMCSFC 277
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVPFTRGRERSRPVESIV+EV ELWKEGVKEVTLLGQNVNSYND S +E++VE G+NW+L
Sbjct: 278 IVPFTRGRERSRPVESIVREVAELWKEGVKEVTLLGQNVNSYNDASEIERKVESGSNWKL 337
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
SEGF+SM KVK MGLRF+DLLDRLS EFPEMRFR+TSPHPKDFPDELLY+MR+R N+CK
Sbjct: 338 SEGFSSMAKVKNMGLRFSDLLDRLSSEFPEMRFRFTSPHPKDFPDELLYLMRERHNICKL 397
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLPAQTG+S VLERMRRGYTREAYLDLVQKIR IIPDV LSSDFICGFCGETEEEH++T
Sbjct: 398 IHLPAQTGSSPVLERMRRGYTREAYLDLVQKIRSIIPDVALSSDFICGFCGETEEEHSET 457
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
LTL+KAVGYDMA+MFAYSMRE+THAHRNYVDDVPEE+KQRRL ELIE FR STGQC+DSQ
Sbjct: 458 LTLVKAVGYDMAFMFAYSMREKTHAHRNYVDDVPEEIKQRRLAELIETFRGSTGQCFDSQ 517
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+GT QLVLVEGPNK+APDTEL+GKSD+GHRV F
Sbjct: 518 IGTTQLVLVEGPNKRAPDTELMGKSDKGHRVLF 550
>gi|356495378|ref|XP_003516555.1| PREDICTED: CDK5RAP1-like protein-like [Glycine max]
Length = 611
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/482 (83%), Positives = 440/482 (91%), Gaps = 8/482 (1%)
Query: 43 HFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKN 102
HFI Q++LTAS+ L P +EV GRIY ETYGCQMNVNDMEIVLSIMKN
Sbjct: 77 HFIPQATLTASEAQPRLVPDTEVPPT--------GRIYHETYGCQMNVNDMEIVLSIMKN 128
Query: 103 AGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPP 162
AGY E+++VPE+AE+IFINTCAIRD AE KVWQRLNYFWFLKR WK NVATGRSQS PP
Sbjct: 129 AGYGEIVSVPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVATGRSQSMRPP 188
Query: 163 KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYA 222
K+VVLGCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLLEEVDYGQ+GINTLLSLEETYA
Sbjct: 189 KVVVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLEEVDYGQRGINTLLSLEETYA 248
Query: 223 DISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKE 282
DI+PVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV+EV ELWKEGVKE
Sbjct: 249 DINPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVREVAELWKEGVKE 308
Query: 283 VTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM 342
V LLGQNVNSYND SG+E+EVE G+NW+LSEGF+SM KVK MGLRF+DLLDRLS EFPEM
Sbjct: 309 VMLLGQNVNSYNDASGIEREVESGSNWKLSEGFSSMAKVKNMGLRFSDLLDRLSSEFPEM 368
Query: 343 RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQK 402
RFR+TSPHPKDFPD+LLY+MR+R N+CK IHLPAQTG+S VLERMRRGYTREAYLDLVQK
Sbjct: 369 RFRFTSPHPKDFPDDLLYLMRERHNICKLIHLPAQTGSSTVLERMRRGYTREAYLDLVQK 428
Query: 403 IRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVD 462
IR IIPDV LSSDFICGFCGETEEEH++TLTL+KAVGYDMA++FAYSMRE+THAHRNYVD
Sbjct: 429 IRSIIPDVALSSDFICGFCGETEEEHSETLTLIKAVGYDMAFLFAYSMREKTHAHRNYVD 488
Query: 463 DVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
DVPEE+KQRRL ELIE FRESTGQC+DSQ+GT QLVLVEGPNK+APDTEL+GKSD+GHRV
Sbjct: 489 DVPEEIKQRRLAELIETFRESTGQCFDSQIGTTQLVLVEGPNKRAPDTELMGKSDKGHRV 548
Query: 523 AF 524
F
Sbjct: 549 LF 550
>gi|83281193|dbj|BAD15110.2| similar to CDK5 regulatory subunit-associated protein [Nicotiana
tabacum]
Length = 623
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/511 (79%), Positives = 454/511 (88%), Gaps = 11/511 (2%)
Query: 19 SFSLNLSRNFS--HSSLDLPDG---PGLHHFIAQSSLTASQPLADLAPASEVSSATGSEV 73
+FS+ +SRNFS HS L P L FI +++ T S +D+ + S S+V
Sbjct: 56 TFSIKISRNFSQCHSRTSLTSKNQIPTLRDFIPKATQTVSS--SDV----QQESVMISDV 109
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GRIY ETYGCQMNVNDMEIVLSIMKNAGY+E + VPENAE+IFINTCAIRD AE KV
Sbjct: 110 MPRGRIYHETYGCQMNVNDMEIVLSIMKNAGYTESVEVPENAEIIFINTCAIRDNAELKV 169
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDA 193
WQRLNYFWFLKR+WK NVA+GRSQS HPPK+ VLGCMAERLKDKILD+DKMVDVVCGPDA
Sbjct: 170 WQRLNYFWFLKRQWKSNVASGRSQSAHPPKVSVLGCMAERLKDKILDSDKMVDVVCGPDA 229
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
YRDLPRLLEEVDYGQKGINTLLSLEETYADI+PVRISKNS++AFVSVMRGCNNMCSFCIV
Sbjct: 230 YRDLPRLLEEVDYGQKGINTLLSLEETYADINPVRISKNSISAFVSVMRGCNNMCSFCIV 289
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
PFTRGRERSRPVESIVKEV ELWKEGVKEVTLLGQNVNSYNDTSG+E EP +W LS+
Sbjct: 290 PFTRGRERSRPVESIVKEVAELWKEGVKEVTLLGQNVNSYNDTSGVENPAEPAVSWELSD 349
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
GF+SMCKVK +GLRFADLLDRL+ EFPEMRFRYTSPHPKDFPD+LLY+MRDR N+CK IH
Sbjct: 350 GFSSMCKVKHVGLRFADLLDRLATEFPEMRFRYTSPHPKDFPDDLLYVMRDRYNICKSIH 409
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LPAQ+G+SAVLERMRRGYTREAYLDLV+KIR IIPD+G+SSDFICGFCGETEE+H DTL+
Sbjct: 410 LPAQSGSSAVLERMRRGYTREAYLDLVKKIRDIIPDMGISSDFICGFCGETEEDHEDTLS 469
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L+KAV YDMAYMFAYSMRE+THAHR YVDDVP++VKQRRLTELIEAFR STGQ YDS++G
Sbjct: 470 LVKAVCYDMAYMFAYSMREKTHAHRKYVDDVPDDVKQRRLTELIEAFRGSTGQNYDSKIG 529
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
T+QLVLVEGPNK+APDTEL+GKSDRGHRV+F
Sbjct: 530 TLQLVLVEGPNKRAPDTELIGKSDRGHRVSF 560
>gi|147794658|emb|CAN73510.1| hypothetical protein VITISV_007911 [Vitis vinifera]
Length = 590
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/460 (86%), Positives = 433/460 (94%)
Query: 65 VSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCA 124
++ + SE+ +GRIY ETYGCQMN+NDMEIVLSIMK AGY+EV+ VPE+AEVIFINTCA
Sbjct: 63 LNPVSASEILPRGRIYHETYGCQMNINDMEIVLSIMKKAGYNEVVEVPESAEVIFINTCA 122
Query: 125 IRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKM 184
IRD AE KVWQRLNYFWFLKR WK NV+ GR+ S HPPK+VVLGCMAERLKDKILDADKM
Sbjct: 123 IRDNAEQKVWQRLNYFWFLKRHWKSNVSIGRADSLHPPKVVVLGCMAERLKDKILDADKM 182
Query: 185 VDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGC 244
VDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS+MRGC
Sbjct: 183 VDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSIMRGC 242
Query: 245 NNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVE 304
NNMCSFCIVPFTRGRERSRPVESIV+EV ELWKEGVKEV LLGQNVNSYND SG +KEVE
Sbjct: 243 NNMCSFCIVPFTRGRERSRPVESIVREVAELWKEGVKEVMLLGQNVNSYNDASGFDKEVE 302
Query: 305 PGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRD 364
PGANW+LSEGF+S CKVKKMGLRF+DLLDRLS EFPEMRFRYTSPHPKDFPDELLY+MRD
Sbjct: 303 PGANWKLSEGFSSKCKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDELLYLMRD 362
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
R NVCK IHLPAQTG+S VLERMRRGYTREAYLDLVQKIR+I+PDVG++SDFICGFCGET
Sbjct: 363 RYNVCKSIHLPAQTGSSTVLERMRRGYTREAYLDLVQKIRRIVPDVGITSDFICGFCGET 422
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
EEE+ADT++L+KAVGYDMAYMFAYSMRE+THAHRNYVDDVP+ +KQRRL E+IE FREST
Sbjct: 423 EEEYADTISLVKAVGYDMAYMFAYSMREKTHAHRNYVDDVPDNIKQRRLAEMIEVFREST 482
Query: 485 GQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
GQCYDSQ+GTVQLVLVEGPNK+APDTEL+GK+DRGHRV+F
Sbjct: 483 GQCYDSQIGTVQLVLVEGPNKRAPDTELIGKTDRGHRVSF 522
>gi|255560986|ref|XP_002521505.1| radical sam protein, putative [Ricinus communis]
gi|223539183|gb|EEF40776.1| radical sam protein, putative [Ricinus communis]
Length = 535
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/469 (84%), Positives = 434/469 (92%), Gaps = 2/469 (0%)
Query: 56 LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENA 115
L+ A A EV T E+ +GRIY ETYGCQMN+NDMEIVLSIMK+AGY EV++VPE+A
Sbjct: 7 LSRTAQALEVPLDT--EIPVRGRIYHETYGCQMNINDMEIVLSIMKDAGYREVVDVPESA 64
Query: 116 EVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLK 175
E+IFINTCAIRD AE KVWQRLNYFWFLKR WK NV GRSQS PPK+VVLGCMAERLK
Sbjct: 65 EIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVTIGRSQSLSPPKVVVLGCMAERLK 124
Query: 176 DKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVT 235
DKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADI PVRISKNS+T
Sbjct: 125 DKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADICPVRISKNSIT 184
Query: 236 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYND 295
AFVSVMRGCNNMCSFCIVPFTRGRERSRPV+SIVKEV ELWKEGVKEVTLLGQNVNSYND
Sbjct: 185 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVDSIVKEVAELWKEGVKEVTLLGQNVNSYND 244
Query: 296 TSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFP 355
SG+E EVEPG+NW+LSEGF+SMCKVKKMGLRF+DLLDRLS EFPEMRFRYTSPHPKDFP
Sbjct: 245 ASGVENEVEPGSNWKLSEGFSSMCKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFP 304
Query: 356 DELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSD 415
D+LLY+MRD+ N+CK IHLPAQ+G+S VLERMRRGYTREAYLDLVQKIR+I+PDVG++SD
Sbjct: 305 DDLLYVMRDKYNICKSIHLPAQSGSSTVLERMRRGYTREAYLDLVQKIRRIMPDVGITSD 364
Query: 416 FICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTE 475
FICGFCGETEE+H TL+L++ VGYDMAYMFAYSMRE+THAHRNY DDVP+ VKQRRLTE
Sbjct: 365 FICGFCGETEEDHESTLSLVRTVGYDMAYMFAYSMREKTHAHRNYNDDVPDNVKQRRLTE 424
Query: 476 LIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
LIEAFR STGQCYDSQ+G++QLVLVEGPNK+APDTEL+GK+DRGHRV+F
Sbjct: 425 LIEAFRGSTGQCYDSQIGSIQLVLVEGPNKRAPDTELIGKTDRGHRVSF 473
>gi|30690642|ref|NP_195357.2| Methylthiotransferase [Arabidopsis thaliana]
gi|32129440|sp|Q8H0V1.1|CK5P1_ARATH RecName: Full=CDK5RAP1-like protein
gi|25083016|gb|AAN72033.1| putative protein [Arabidopsis thaliana]
gi|30725464|gb|AAP37754.1| At4g36390 [Arabidopsis thaliana]
gi|332661250|gb|AEE86650.1| Methylthiotransferase [Arabidopsis thaliana]
Length = 640
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/530 (75%), Positives = 457/530 (86%), Gaps = 15/530 (2%)
Query: 3 LDPRC---ARRLTTRQL--KRSFSLNLSRNFSHSSLDLP---DGPGLHHFIAQSSLTASQ 54
L PRC RLT + + K+ FSLNLSR+FS S + DGP LH F++ + AS
Sbjct: 51 LLPRCRSSTHRLTQKPINRKKGFSLNLSRSFSISQIASSGKFDGPSLHQFVSNAQAHASL 110
Query: 55 PLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPEN 114
P +E S S++ S+GRIY ETYGCQMN+NDMEIVL+IMKN+GY EV+ PE+
Sbjct: 111 T----TPETESESTLDSDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPES 166
Query: 115 AEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERL 174
AEVIF+NTCAIR+ AE +VWQRLNYFWFLKREWK N ATGR++S PPK+VVLGCMAERL
Sbjct: 167 AEVIFVNTCAIRENAEQRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERL 226
Query: 175 KDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSV 234
KDKILD+DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRIS+NS+
Sbjct: 227 KDKILDSDKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENSI 286
Query: 235 TAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN 294
TAFVSVMRGCNNMC+FCIVPFTRGRERSRPVESI++EV ELW+ GVKEVTLLGQNVNSYN
Sbjct: 287 TAFVSVMRGCNNMCAFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYN 346
Query: 295 DTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDF 354
D S + E GANW SEGF+S CKVK MGLRFADLLDRLS+EFPEMRFR+TSPHPKD+
Sbjct: 347 DDSA---DRESGANWEYSEGFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDY 403
Query: 355 PDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSS 414
PDELLY+MRDR N+C IHLPAQ+GNS +LE+MRRGYTREAYLDLV+KIR IIPDV ++S
Sbjct: 404 PDELLYLMRDRHNICNLIHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITS 463
Query: 415 DFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLT 474
DFI GFCGETEEEH +TL+L++AVGYDMAYMFAYSMRE+THAHRNY DDVPEEVKQRRLT
Sbjct: 464 DFITGFCGETEEEHQETLSLVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLT 523
Query: 475 ELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
ELI+AFRE+TG CYDSQVG+ QLVLVEGPNK+AP+TEL+GK+D+GHRV+F
Sbjct: 524 ELIDAFRETTGPCYDSQVGSTQLVLVEGPNKRAPETELIGKTDKGHRVSF 573
>gi|297798268|ref|XP_002867018.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312854|gb|EFH43277.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 636
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/531 (75%), Positives = 457/531 (86%), Gaps = 14/531 (2%)
Query: 1 TSLDPRC--ARRLTTRQLKR--SFSLNLSRNFSHSSLDLP---DGPGLHHFIAQSSLTAS 53
++L PRC LT + + R F+LNLSR+FS S + DGP LH F++ + AS
Sbjct: 47 SALLPRCRSTHLLTQKPINRKNGFALNLSRSFSVSQIAGSGKFDGPSLHQFVSNAQAHAS 106
Query: 54 QPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPE 113
P +E S S+V S+GRIY ETYGCQMN+NDMEIVLSIMKN+GY EV+ PE
Sbjct: 107 LT----TPETESESTLDSDVASKGRIYHETYGCQMNINDMEIVLSIMKNSGYKEVVTDPE 162
Query: 114 NAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAER 173
+AEVIFINTCAIRD AE +VWQRLNYFWFLKREWK NVA GR+QS PPK+VVLGCMAER
Sbjct: 163 SAEVIFINTCAIRDNAEQRVWQRLNYFWFLKREWKVNVAKGRAQSLKPPKVVVLGCMAER 222
Query: 174 LKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNS 233
LKDKILD+DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRIS+NS
Sbjct: 223 LKDKILDSDKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENS 282
Query: 234 VTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY 293
+TAFVSVMRGCNNMC+FCIVPFTRGRERSRPVESI++EV ELW+ GVKEVTLLGQNVNSY
Sbjct: 283 ITAFVSVMRGCNNMCAFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSY 342
Query: 294 NDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKD 353
ND S + E GANW SEGF+S CKVK MGLRFADLLDRLS++FPEMRFR+TSPHPKD
Sbjct: 343 NDDSS---DPESGANWEYSEGFSSRCKVKNMGLRFADLLDRLSVQFPEMRFRFTSPHPKD 399
Query: 354 FPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLS 413
+PDELLY+MRDR N+C IHLPAQ+GNS +LE+MRRGYTREAYLDLV+KIR IIPDV ++
Sbjct: 400 YPDELLYLMRDRHNICNLIHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAIT 459
Query: 414 SDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRL 473
SDFI GFCGETEEEH +TL+L++AVGYDMAYMFAYSMRE+THAHR Y DDVPEEVKQRRL
Sbjct: 460 SDFITGFCGETEEEHQETLSLVRAVGYDMAYMFAYSMREKTHAHRKYTDDVPEEVKQRRL 519
Query: 474 TELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
TELIEAFRE+TG CY+SQVG++QLVLVEGPNK+AP+TEL+GK+D+GHRV+F
Sbjct: 520 TELIEAFRETTGPCYNSQVGSIQLVLVEGPNKRAPETELIGKTDKGHRVSF 570
>gi|449444679|ref|XP_004140101.1| PREDICTED: CDK5RAP1-like protein-like [Cucumis sativus]
Length = 635
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/513 (77%), Positives = 447/513 (87%), Gaps = 18/513 (3%)
Query: 24 LSRNFSHSSLDLPDGPGLHHFIAQSSLTAS-QPLADLAPA--SEVSSATG---------S 71
LS +FS S+ G FIA ++ + S Q +L P+ SE S G S
Sbjct: 68 LSGSFSRSTRRFRGG-----FIAAATASGSVQRSEELRPSISSEQSWVLGQNGTESLPAS 122
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+V GR+Y ETYGCQMN+NDME+VLSIMK AGYSE ++ PE AE+IFINTCAIRD AE
Sbjct: 123 DVPLSGRVYHETYGCQMNINDMEVVLSIMKKAGYSETVDTPETAEIIFINTCAIRDNAEQ 182
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGP 191
KVWQRLNYFWFLKR WK NVATGRSQS+HPPK+VVLGCMAERLKDKILD+DKMVDVVCGP
Sbjct: 183 KVWQRLNYFWFLKRNWKSNVATGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVCGP 242
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
DAYRDLPRLL+EVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCSFC
Sbjct: 243 DAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCSFC 302
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVPFTRGRERSRPVESIV EV EL++EGVKEVTLLGQNVNSYNDT+ ++EPG NW+L
Sbjct: 303 IVPFTRGRERSRPVESIVCEVRELYREGVKEVTLLGQNVNSYNDTTE-NADIEPGTNWKL 361
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
S+GF+++ KVKKMGLRF+DLLDRLS EFPEMRFRYTSPHPKDFPDE LY+MRDR N+CK
Sbjct: 362 SDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICKS 421
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLPAQ+GNS VLERMRRGYTREAYLDLV KIR IIPDVG++SDFICGFCGETEEEHADT
Sbjct: 422 IHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADT 481
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L+L+ VGYDMAYMFAYSMRE+THAHRNYVDD+PEEVKQRRLTELIEAFR STG+CYDSQ
Sbjct: 482 LSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDSQ 541
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G+VQLVLVEGPNK+AP+TE++GKSDR HRV+F
Sbjct: 542 IGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSF 574
>gi|297735074|emb|CBI17436.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/524 (76%), Positives = 438/524 (83%), Gaps = 38/524 (7%)
Query: 6 RCARRLTTRQLKRSFSLNLSRNFSHSSLDLP-----DGPGLHHFIAQSSLTASQPLADLA 60
RC R T + FSL SR FS S LP + P LH FIAQ+++ S+ D
Sbjct: 115 RCNLR-TPPPFRPGFSLTFSRKFSQSHSHLPLSNKSEVPSLHSFIAQAAVATSEVQPD-- 171
Query: 61 PASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFI 120
+ SE+ +GRIY ETYGCQMN+NDMEIVLSIMK AGY+EV+ VPE+AEVIFI
Sbjct: 172 ------PVSASEILPRGRIYHETYGCQMNINDMEIVLSIMKKAGYNEVVEVPESAEVIFI 225
Query: 121 NTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILD 180
NTCAIRD AE KVWQRLNYFWFLKR WK NV+ GR+ S HPPK+VVLGCMAERLKDKILD
Sbjct: 226 NTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVSIGRADSLHPPKVVVLGCMAERLKDKILD 285
Query: 181 ADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSV 240
ADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS+
Sbjct: 286 ADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSI 345
Query: 241 MRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGME 300
MRGCNNMCSFCIVPFTRGRERSRPVESIV+EV ELWKEGVKEV LLGQNVNSYND SG +
Sbjct: 346 MRGCNNMCSFCIVPFTRGRERSRPVESIVREVAELWKEGVKEVMLLGQNVNSYNDASGFD 405
Query: 301 KEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
KEVEPGANW+LSE EFPEMRFRYTSPHPKDFPDELLY
Sbjct: 406 KEVEPGANWKLSE------------------------EFPEMRFRYTSPHPKDFPDELLY 441
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
+MRDR NVCK IHLPAQTG+S VLERMRRGYTREAYLDLVQKIR+I+PDVG++SDFICGF
Sbjct: 442 LMRDRYNVCKSIHLPAQTGSSTVLERMRRGYTREAYLDLVQKIRRIVPDVGITSDFICGF 501
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGETEEE+ADT++L+KAVGYDMAYMFAYSMRE+THAHRNYVDDVP+ +KQRRL E+IE F
Sbjct: 502 CGETEEEYADTISLVKAVGYDMAYMFAYSMREKTHAHRNYVDDVPDNIKQRRLAEMIEVF 561
Query: 481 RESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
RESTGQCYDSQ+GTVQLVLVEGPNK+APDTEL+GK+DRGHRV+F
Sbjct: 562 RESTGQCYDSQIGTVQLVLVEGPNKRAPDTELIGKTDRGHRVSF 605
>gi|115486105|ref|NP_001068196.1| Os11g0592800 [Oryza sativa Japonica Group]
gi|110832794|sp|Q2R1U4.1|CK5P1_ORYSJ RecName: Full=CDK5RAP1-like protein
gi|77551766|gb|ABA94563.1| CDK5RAP1, putative, expressed [Oryza sativa Japonica Group]
gi|113645418|dbj|BAF28559.1| Os11g0592800 [Oryza sativa Japonica Group]
gi|215694718|dbj|BAG89909.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616254|gb|EEE52386.1| hypothetical protein OsJ_34478 [Oryza sativa Japonica Group]
Length = 600
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/477 (81%), Positives = 432/477 (90%), Gaps = 7/477 (1%)
Query: 53 SQPLADLAPASEVSSA-----TGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSE 107
S+PLA A A+ VS A +G S+GRIY ETYGCQMNVNDMEIVLSIMKN GY E
Sbjct: 65 SRPLAASA-ATAVSEAQTDLESGPVTASKGRIYHETYGCQMNVNDMEIVLSIMKNEGYDE 123
Query: 108 VINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVL 167
++ PE+AE+IFINTCAIRD AE KVWQRLNYFWFLKR+WK NVA GRS+S PPKI VL
Sbjct: 124 IVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKANVAAGRSRSLRPPKIAVL 183
Query: 168 GCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV 227
GCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLL+EVDYGQKGINTLLSLEETYADI+PV
Sbjct: 184 GCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPV 243
Query: 228 RISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLG 287
RIS NSVTAFVS+MRGCNNMCSFCIVPFTRGRERSRPV SIV+EV ELWK GVKEV LLG
Sbjct: 244 RISDNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWKAGVKEVMLLG 303
Query: 288 QNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYT 347
QNVNSYNDTS +E E+EPG NW LSEGF+SMCKVK MGLRFADLLD+LSLE+PEMRFR+T
Sbjct: 304 QNVNSYNDTSEVE-ELEPGKNWELSEGFSSMCKVKNMGLRFADLLDQLSLEYPEMRFRFT 362
Query: 348 SPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII 407
SPHPKD+PDELLY+MRDR NVCK IH+PAQ+G+SAVLERMRRGYTREAYL+LVQKIR II
Sbjct: 363 SPHPKDYPDELLYLMRDRHNVCKLIHMPAQSGSSAVLERMRRGYTREAYLELVQKIRSII 422
Query: 408 PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEE 467
PDVGLSSDFI GFCGETEEEHA+TLTL++AVGYDMAYMFAYSMRE+THAHRNYVDDVP++
Sbjct: 423 PDVGLSSDFISGFCGETEEEHAETLTLVRAVGYDMAYMFAYSMREKTHAHRNYVDDVPDD 482
Query: 468 VKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VKQRRL ELI FRE+T + YDSQVGTVQLVLVEGPNK+AP+TE++GK+DRGHRV+F
Sbjct: 483 VKQRRLAELISTFRETTAKIYDSQVGTVQLVLVEGPNKRAPETEMIGKTDRGHRVSF 539
>gi|242071517|ref|XP_002451035.1| hypothetical protein SORBIDRAFT_05g023010 [Sorghum bicolor]
gi|241936878|gb|EES10023.1| hypothetical protein SORBIDRAFT_05g023010 [Sorghum bicolor]
Length = 601
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/479 (79%), Positives = 425/479 (88%), Gaps = 9/479 (1%)
Query: 46 AQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGY 105
A ++ S+ DL P GS S+GRIY ETYGCQMN+NDMEIVLSIMKN GY
Sbjct: 71 ASAATVVSKGQTDLVP--------GSTTSSKGRIYHETYGCQMNINDMEIVLSIMKNDGY 122
Query: 106 SEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV 165
E++ PE+AE+IFINTCAIRD AE KVWQRLNYFWFLKREWK NVA GRS+S PPKI
Sbjct: 123 DEIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKREWKANVAEGRSKSLRPPKIA 182
Query: 166 VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADIS 225
VLGCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLL+EVDYG KG+NTLLSLEETYADI+
Sbjct: 183 VLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGHKGMNTLLSLEETYADIT 242
Query: 226 PVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTL 285
PVRIS NSVTAFVS+MRGCNNMCSFCIVPFTRGRERSRPV SIV+EV ELWK GVKEV L
Sbjct: 243 PVRISDNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWKAGVKEVML 302
Query: 286 LGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFR 345
LGQNVNSYNDTS +E E+EPG NW+LSEGF+SMCKVK MGLRFADLLDRLSLE+PEMRFR
Sbjct: 303 LGQNVNSYNDTSEVE-ELEPGQNWQLSEGFSSMCKVKNMGLRFADLLDRLSLEYPEMRFR 361
Query: 346 YTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQ 405
+TSPHPKDFPDELLY+MRDR N+C IHLPAQTG++AVLERMRRGYTREAYL+LV KIR
Sbjct: 362 FTSPHPKDFPDELLYLMRDRYNICNLIHLPAQTGSTAVLERMRRGYTREAYLELVHKIRN 421
Query: 406 IIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVP 465
+IPDVGLSSDFI GFCGETE++HA+TL+L++AVGYDMAYMFAYSMRE+THAHRNY DDVP
Sbjct: 422 VIPDVGLSSDFITGFCGETEDDHAETLSLVRAVGYDMAYMFAYSMREKTHAHRNYEDDVP 481
Query: 466 EEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
E+VKQRRL ELI FRE+T + YDSQ+GTVQLVLVEGPNK+AP TEL+GK+DRGH+V+F
Sbjct: 482 EDVKQRRLMELINTFRETTKKNYDSQIGTVQLVLVEGPNKRAPKTELIGKTDRGHKVSF 540
>gi|414591663|tpg|DAA42234.1| TPA: hypothetical protein ZEAMMB73_668706 [Zea mays]
Length = 594
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/483 (79%), Positives = 428/483 (88%), Gaps = 10/483 (2%)
Query: 43 HFIAQSSLTA-SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMK 101
H +A S+ TA S+ ADL P GS ++GRIY ETYGCQMN+NDMEIVLSIMK
Sbjct: 60 HTLAASAATAISEGQADLVP--------GSTTSTKGRIYHETYGCQMNINDMEIVLSIMK 111
Query: 102 NAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHP 161
N GY E++ PE+AE+IFINTCAIRD AE KVWQRLNYFWFLKREWK NVA GR++S P
Sbjct: 112 NEGYDEIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKREWKANVAEGRAKSMRP 171
Query: 162 PKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETY 221
PKI VLGCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLL+EVDYG KG+NTLLSLEETY
Sbjct: 172 PKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGHKGMNTLLSLEETY 231
Query: 222 ADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVK 281
ADI+PVRIS NS+TAFVS+MRGCNNMCSFCIVPFTRGRERSRPV SIV+EV ELWK GVK
Sbjct: 232 ADITPVRISDNSITAFVSIMRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWKVGVK 291
Query: 282 EVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPE 341
EV LLGQNVNSYNDTS +E E+EPG NW+LSEGF+SMCKVK MGLRFADLLDRLSLE+PE
Sbjct: 292 EVMLLGQNVNSYNDTSEVE-ELEPGKNWQLSEGFSSMCKVKNMGLRFADLLDRLSLEYPE 350
Query: 342 MRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQ 401
MRFR+TSPHPKDFPDELLY+MRDR N+C IHLPAQTG++A LERMRRGYTREAYL+LV
Sbjct: 351 MRFRFTSPHPKDFPDELLYLMRDRYNICNLIHLPAQTGSTAALERMRRGYTREAYLELVH 410
Query: 402 KIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYV 461
KIR +IPDVGLSSDFI GFCGETE+EHA+TL+L++AVGYDMAYMFAYSMRE+THAHRNY
Sbjct: 411 KIRDVIPDVGLSSDFITGFCGETEDEHAETLSLVRAVGYDMAYMFAYSMREKTHAHRNYE 470
Query: 462 DDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHR 521
DDVPE VKQRRL ELI FRE+T + YDSQVGTVQLVLVEGPNK+AP TE++GK+DRGH+
Sbjct: 471 DDVPEGVKQRRLMELINTFRETTKKNYDSQVGTVQLVLVEGPNKRAPKTEVIGKTDRGHK 530
Query: 522 VAF 524
V+F
Sbjct: 531 VSF 533
>gi|4006921|emb|CAB16849.1| putative protein [Arabidopsis thaliana]
gi|7270587|emb|CAB80305.1| putative protein [Arabidopsis thaliana]
Length = 587
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/458 (81%), Positives = 420/458 (91%), Gaps = 3/458 (0%)
Query: 67 SATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIR 126
S S++ S+GRIY ETYGCQMN+NDMEIVL+IMKN+GY EV+ PE+AEVIF+NTCAIR
Sbjct: 66 STLDSDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAIR 125
Query: 127 DYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVD 186
+ AE +VWQRLNYFWFLKREWK N ATGR++S PPK+VVLGCMAERLKDKILD+DKMVD
Sbjct: 126 ENAEQRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMVD 185
Query: 187 VVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNN 246
VVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRIS+NS+TAFVSVMRGCNN
Sbjct: 186 VVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCNN 245
Query: 247 MCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPG 306
MC+FCIVPFTRGRERSRPVESI++EV ELW+ GVKEVTLLGQNVNSYND S + E G
Sbjct: 246 MCAFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYNDDSA---DRESG 302
Query: 307 ANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRP 366
ANW SEGF+S CKVK MGLRFADLLDRLS+EFPEMRFR+TSPHPKD+PDELLY+MRDR
Sbjct: 303 ANWEYSEGFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRH 362
Query: 367 NVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEE 426
N+C IHLPAQ+GNS +LE+MRRGYTREAYLDLV+KIR IIPDV ++SDFI GFCGETEE
Sbjct: 363 NICNLIHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEE 422
Query: 427 EHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQ 486
EH +TL+L++AVGYDMAYMFAYSMRE+THAHRNY DDVPEEVKQRRLTELI+AFRE+TG
Sbjct: 423 EHQETLSLVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGP 482
Query: 487 CYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
CYDSQVG+ QLVLVEGPNK+AP+TEL+GK+D+GHRV+F
Sbjct: 483 CYDSQVGSTQLVLVEGPNKRAPETELIGKTDKGHRVSF 520
>gi|414591664|tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
Length = 1523
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/513 (74%), Positives = 427/513 (83%), Gaps = 40/513 (7%)
Query: 43 HFIAQSSLTA-SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMK 101
H +A S+ TA S+ ADL P GS ++GRIY ETYGCQMN+NDMEIVLSIMK
Sbjct: 60 HTLAASAATAISEGQADLVP--------GSTTSTKGRIYHETYGCQMNINDMEIVLSIMK 111
Query: 102 NAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHP 161
N GY E++ PE+AE+IFINTCAIRD AE KVWQRLNYFWFLKREWK NVA GR++S P
Sbjct: 112 NEGYDEIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKREWKANVAEGRAKSMRP 171
Query: 162 PKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETY 221
PKI VLGCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLL+EVDYG KG+NTLLSLEETY
Sbjct: 172 PKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGHKGMNTLLSLEETY 231
Query: 222 ADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVK 281
ADI+PVRIS NS+TAFVS+MRGCNNMCSFCIVPFTRGRERSRPV SIV+EV ELWK GVK
Sbjct: 232 ADITPVRISDNSITAFVSIMRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWKVGVK 291
Query: 282 EVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPE 341
EV LLGQNVNSYNDTS +E E+EPG NW+LSEGF+SMCKVK MGLRFADLLDRLSLE+PE
Sbjct: 292 EVMLLGQNVNSYNDTSEVE-ELEPGKNWQLSEGFSSMCKVKNMGLRFADLLDRLSLEYPE 350
Query: 342 MRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQ 401
MRFR+TSPHPKDFPDELLY+MRDR N+C IHLPAQTG++A LERMRRGYTREAYL+LV
Sbjct: 351 MRFRFTSPHPKDFPDELLYLMRDRYNICNLIHLPAQTGSTAALERMRRGYTREAYLELVH 410
Query: 402 KIRQIIPDVGLSSDFICG------------------------------FCGETEEEHADT 431
KIR +IPDVGLSSDFI FCGETE+EHA+T
Sbjct: 411 KIRDVIPDVGLSSDFITATAGWRLQQCSRRAGLQEKGQGAVAAGVAAGFCGETEDEHAET 470
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L+L++AVGYDMAYMFAYSMRE+THAHRNY DDVPE VKQRRL ELI FRE+T + YDSQ
Sbjct: 471 LSLVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPEGVKQRRLMELINTFRETTKKNYDSQ 530
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VGTVQLVLVEGPNK+AP TE++GK+DRGH+V+F
Sbjct: 531 VGTVQLVLVEGPNKRAPKTEVIGKTDRGHKVSF 563
>gi|357156278|ref|XP_003577401.1| PREDICTED: CDK5RAP1-like protein-like [Brachypodium distachyon]
Length = 596
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/464 (80%), Positives = 418/464 (90%), Gaps = 3/464 (0%)
Query: 61 PASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFI 120
P +E+ S G +GRIY ETYGCQMNVNDMEIVLSIMK GY+E++ PE+AE+IFI
Sbjct: 75 PQTELES--GPATAKKGRIYHETYGCQMNVNDMEIVLSIMKKEGYNEIVPDPESAEIIFI 132
Query: 121 NTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILD 180
NTCAIRD AE KVWQRLNYFWFLKR+WK NVA GRS+S PPKI VLGCMAERLK+KILD
Sbjct: 133 NTCAIRDNAEQKVWQRLNYFWFLKRQWKSNVAGGRSKSLRPPKIAVLGCMAERLKEKILD 192
Query: 181 ADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSV 240
+DKMVDVVCGPDAYRDLPRLL+EVDYGQKGINTLLSLEETYADI+PVRIS NSVTAFVS+
Sbjct: 193 SDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPVRISDNSVTAFVSI 252
Query: 241 MRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGME 300
MRGCNNMCSFCIVPFTRGRERSRPV SIV+EV ELW GVKEV LLGQNVNSYNDTS +E
Sbjct: 253 MRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWDAGVKEVMLLGQNVNSYNDTSEVE 312
Query: 301 KEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
++EPG NW+LSEGF+S CKVK MGLRFADLLD LSLE+PEMRFR+TSPHPKDFPDELLY
Sbjct: 313 -DLEPGKNWQLSEGFSSRCKVKNMGLRFADLLDHLSLEYPEMRFRFTSPHPKDFPDELLY 371
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
+MRDR N+CK IHLPAQ+G++ VLERMRRGYTREAYL+LVQKIR +IPDVGLSSD+I GF
Sbjct: 372 LMRDRHNICKLIHLPAQSGSTEVLERMRRGYTREAYLELVQKIRNVIPDVGLSSDYISGF 431
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGETE++HADTL+L++AVGYDMAYMFAYSMRE+THAHRNY DDVP +VKQRRLTELI F
Sbjct: 432 CGETEDDHADTLSLVRAVGYDMAYMFAYSMREKTHAHRNYEDDVPNDVKQRRLTELINTF 491
Query: 481 RESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
RE+T + YDSQVGT QLVLVEGPNK+AP+TEL GK+DRGH+V+F
Sbjct: 492 RETTRKIYDSQVGTTQLVLVEGPNKRAPETELFGKTDRGHKVSF 535
>gi|326495462|dbj|BAJ85827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 586
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/493 (76%), Positives = 426/493 (86%), Gaps = 12/493 (2%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
LP P LH + L A S+P D S +G+ +GRIY ETYGCQMNVN
Sbjct: 42 LPAPPHLHVSRSVRHLAATDVSEPQTD--------SESGTATVKKGRIYHETYGCQMNVN 93
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
DMEIVLSIMK GY++++ PE+AE+IFINTCAIRD AE KVWQRLNYFWFLKR+WK NV
Sbjct: 94 DMEIVLSIMKKEGYNDIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKTNV 153
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
A GRS+S PPKI VLGCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLL+EVDYGQKGI
Sbjct: 154 AGGRSKSLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGI 213
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
NTLLSLEETYADI+PVRIS NSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPV S+V+E
Sbjct: 214 NTLLSLEETYADITPVRISDNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVSSVVRE 273
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V ELW GVKEV LLGQNVNSYNDTS +E E+EPG NW+LSEGF+S CKVK GLRFADL
Sbjct: 274 VGELWYAGVKEVMLLGQNVNSYNDTSEVE-ELEPGKNWQLSEGFSSRCKVKNTGLRFADL 332
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD+LSLE+PEMRFR+TSPHPKDFPDELLY+MRDR N+CK IHLPAQ+G++ VLERM+RGY
Sbjct: 333 LDQLSLEYPEMRFRFTSPHPKDFPDELLYLMRDRHNICKLIHLPAQSGSTEVLERMKRGY 392
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
TREAYL+LVQKIR +IPDVGLSSDFI GFC ETE++HADTL+L++AVGYDMAYMFAYSMR
Sbjct: 393 TREAYLELVQKIRNVIPDVGLSSDFISGFCEETEDDHADTLSLVRAVGYDMAYMFAYSMR 452
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
E+THAHRNY DDVP +VKQRRL ELI FRE+T + YDSQ+GT Q+VLVEGPNK+AP+TE
Sbjct: 453 EKTHAHRNYEDDVPNDVKQRRLAELINTFRETTRKIYDSQIGTTQVVLVEGPNKRAPETE 512
Query: 512 LVGKSDRGHRVAF 524
L GK+DRGHRV+F
Sbjct: 513 LFGKTDRGHRVSF 525
>gi|168008611|ref|XP_001757000.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691871|gb|EDQ78231.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 523
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/449 (71%), Positives = 375/449 (83%), Gaps = 9/449 (2%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMNVNDMEIVL+IMK++GY+E++ PE +++IFINTCAIR+ AEHK+W R
Sbjct: 30 GKLYVETYGCQMNVNDMEIVLAIMKDSGYTEIVQTPEESDIIFINTCAIRENAEHKIWHR 89
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
LNYF LK + ++ PPK+ VLGCMAERLK+K++ ADKMVDVVCGPDAYRD
Sbjct: 90 LNYFKHLK--------SRATRPAKPPKVAVLGCMAERLKEKLIVADKMVDVVCGPDAYRD 141
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LPRLL VD GQ GINTLLSLEETYAD+SPVRI+KNSVTAFVSVMRGCNNMCSFCIVPFT
Sbjct: 142 LPRLLSLVDEGQTGINTLLSLEETYADVSPVRIAKNSVTAFVSVMRGCNNMCSFCIVPFT 201
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR-LSEGF 315
RGRERSRPV SI +EV ELW++GVKEV LLGQNVNSYNDTS ++ E LS GF
Sbjct: 202 RGRERSRPVSSIAREVSELWEQGVKEVILLGQNVNSYNDTSEIDGGDENAKYMSTLSPGF 261
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+++ K K++GL FA LLD LS ++PEMRFR+TSPHPKDFPD+LL++MRDRPN+C +HLP
Sbjct: 262 STIYKTKELGLSFAHLLDVLSSQYPEMRFRFTSPHPKDFPDDLLFLMRDRPNICNMVHLP 321
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ+G++ VLERMRRGYTREAYL V +IR IIPDV +SSDFI GFCGETEE+H DTL L+
Sbjct: 322 AQSGSTRVLERMRRGYTREAYLACVDRIRMIIPDVSISSDFISGFCGETEEDHQDTLKLV 381
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
VGYDMAYMFAYSMRE+THAHRNY DDVPE VK RRL E+I FRE+T + SQ+ T+
Sbjct: 382 AEVGYDMAYMFAYSMREKTHAHRNYEDDVPEPVKNRRLAEMITTFRETTLPRFTSQLQTM 441
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
QLVLVEGPNK+AP+TELVGKSD+GHRV F
Sbjct: 442 QLVLVEGPNKRAPETELVGKSDKGHRVIF 470
>gi|357483621|ref|XP_003612097.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Medicago
truncatula]
gi|355513432|gb|AES95055.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Medicago
truncatula]
Length = 752
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/398 (78%), Positives = 345/398 (86%), Gaps = 8/398 (2%)
Query: 22 LNLSRNFSHSSLDLPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQ 81
+ SR FS S P P L +FIAQ+SLTASQ + +E S GRIY
Sbjct: 82 ITASRTFSSLSTK-PKNPSLRNFIAQASLTASQ-------FQQPHLVADTEAPSTGRIYH 133
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMNVNDMEIVLSIMKNAGY+E++ PENAE+IFINTCAIRD AE KVWQRLNYFW
Sbjct: 134 ETYGCQMNVNDMEIVLSIMKNAGYNEIVTAPENAEIIFINTCAIRDNAEMKVWQRLNYFW 193
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLL 201
FLKR WK NVATGRSQS PPK+VVLGCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLL
Sbjct: 194 FLKRNWKANVATGRSQSLRPPKVVVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLL 253
Query: 202 EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRER 261
EEV+YGQKGINTLLSLEETYADI+PVRIS+NS++AFVSVMRGCNNMCSFCIVPFTRGRER
Sbjct: 254 EEVEYGQKGINTLLSLEETYADINPVRISQNSISAFVSVMRGCNNMCSFCIVPFTRGRER 313
Query: 262 SRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKV 321
SRPVESIV+EV ELWKEGVKEVTLLGQNVNSYND S +EKE E G+NW+LSEGF+S+ KV
Sbjct: 314 SRPVESIVREVAELWKEGVKEVTLLGQNVNSYNDASVVEKEAEAGSNWKLSEGFSSISKV 373
Query: 322 KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNS 381
+ GLRF+DLLDRLSLEFPEMRFR+TSPHPKD+PDELLYIMR+R N+CK IHLPAQ+G+S
Sbjct: 374 RTTGLRFSDLLDRLSLEFPEMRFRFTSPHPKDYPDELLYIMRERHNICKLIHLPAQSGSS 433
Query: 382 AVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICG 419
+LERMRRGYTREAYL LVQKIR IIPDV LSSDFICG
Sbjct: 434 KMLERMRRGYTREAYLSLVQKIRSIIPDVALSSDFICG 471
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 99/106 (93%)
Query: 419 GFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIE 478
FCGETEE+H+DTLTL+K VGYDMAYMFAYSMRE+THAHRNYVDDVPEE KQRRLTELIE
Sbjct: 586 SFCGETEEDHSDTLTLVKEVGYDMAYMFAYSMREKTHAHRNYVDDVPEETKQRRLTELIE 645
Query: 479 AFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
FRESTG+CYD QVGT QLVLVEGPNK+APDTEL+GKSD+GHRV F
Sbjct: 646 TFRESTGKCYDEQVGTTQLVLVEGPNKRAPDTELIGKSDKGHRVIF 691
>gi|302814840|ref|XP_002989103.1| hypothetical protein SELMODRAFT_235679 [Selaginella moellendorffii]
gi|300143204|gb|EFJ09897.1| hypothetical protein SELMODRAFT_235679 [Selaginella moellendorffii]
Length = 507
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 294/459 (64%), Positives = 361/459 (78%), Gaps = 26/459 (5%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN ND+E+VL+IMK AGY +++ +PE ++VI INTCAIRD AE+K+WQRLNYF +K W
Sbjct: 1 MNFNDLEVVLAIMKKAGYGDIVQLPEESDVILINTCAIRDNAENKIWQRLNYFKHIKSNW 60
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
+KN G S+ PPK+ VLGCMAERLK+K+++ADKMVDVVCGPDAYRDLPRLL V+ G
Sbjct: 61 RKN---GTKSSRPPPKVAVLGCMAERLKEKLIEADKMVDVVCGPDAYRDLPRLLSSVEQG 117
Query: 208 QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVES 267
Q+ INTLLSLEETYAD+SPVRI+K+SVTAFVS+MRGCNNMCSFCIVPFTRGRERSRP+ES
Sbjct: 118 QQAINTLLSLEETYADVSPVRIAKDSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPLES 177
Query: 268 IVKEVDELWKEGVKEVTLLGQNVNSYND---TSGMEKEVEPGANWR-------------- 310
IV+EV ELW++GVKEVTLLGQNVNSY D T G+ + E +
Sbjct: 178 IVREVGELWEQGVKEVTLLGQNVNSYCDLSNTPGIREGEEDTPDEEQRREEEKKKTKKSE 237
Query: 311 -----LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
LS GF+++ + + GLRFA LL L+ +PEMRFR+TSPHPKDFPD+LL +MR++
Sbjct: 238 AVSDVLSSGFSAIYRTNESGLRFASLLKCLAETYPEMRFRFTSPHPKDFPDDLLLVMREQ 297
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETE 425
NVC IHLP Q+G+S VLERMRRGYTREAYL+LV++IR+IIP V LSSDFI GFCGETE
Sbjct: 298 HNVCNSIHLPVQSGSSRVLERMRRGYTREAYLELVERIREIIPGVALSSDFIAGFCGETE 357
Query: 426 EEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG 485
E+H TL++++ VGY+MAYMFAYSMRE+T AHR+ VDDVPEEVKQRRL+ELI F+ S+
Sbjct: 358 EDHLQTLSIVETVGYEMAYMFAYSMREKTPAHRHDVDDVPEEVKQRRLSELIATFKRSSA 417
Query: 486 QCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Y SQ+G QLVL+E PNK+ P+ E G+ D G +V F
Sbjct: 418 ARYHSQLGKTQLVLIEAPNKRNPN-EWGGRCDSGQKVFF 455
>gi|302804139|ref|XP_002983822.1| hypothetical protein SELMODRAFT_180500 [Selaginella moellendorffii]
gi|300148659|gb|EFJ15318.1| hypothetical protein SELMODRAFT_180500 [Selaginella moellendorffii]
Length = 469
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 289/437 (66%), Positives = 353/437 (80%), Gaps = 20/437 (4%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN ND+E+VL+IMK AGY +++ +PE ++VI INTCAIRD AE+K+WQRLNYF +K W
Sbjct: 1 MNFNDVEVVLAIMKKAGYGDIVQLPEESDVILINTCAIRDNAENKIWQRLNYFKHIKSNW 60
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
+KN G S+ PPK+ VLGCMAERLK+K+++ADKMVDVVCGPDAYRDLPRLL V+ G
Sbjct: 61 RKN---GTKSSRPPPKVAVLGCMAERLKEKLIEADKMVDVVCGPDAYRDLPRLLSSVEQG 117
Query: 208 QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVES 267
Q+ INTLLSLEETYAD+SPVRI+K+SVTAFVS+MRGCNNMC+FCIVPFTRGRERSRP+ES
Sbjct: 118 QQAINTLLSLEETYADVSPVRIAKDSVTAFVSIMRGCNNMCAFCIVPFTRGRERSRPLES 177
Query: 268 IVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLR 327
IV+EV ELW++GVKEVTLLGQNVNSY D SG F+++ + + GLR
Sbjct: 178 IVREVGELWEQGVKEVTLLGQNVNSYCDLSG----------------FSAIYRTNESGLR 221
Query: 328 FADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERM 387
FA LL L+ +PEMRFR+TSPHPKDFPD+LL +MR+ NVC IHLP Q+G+S VLERM
Sbjct: 222 FASLLKCLAETYPEMRFRFTSPHPKDFPDDLLLVMREHHNVCNSIHLPVQSGSSRVLERM 281
Query: 388 RRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFA 447
RRGYTREAYL+LV++IR+IIP V LSSDFI GFCGETEE+H TL++++ VGY+MAYMFA
Sbjct: 282 RRGYTREAYLELVERIREIIPGVALSSDFIAGFCGETEEDHLQTLSIVETVGYEMAYMFA 341
Query: 448 YSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKA 507
YSMRE+T AHR+ VDDVPEEVKQRRL+ELI F+ S+ Y SQ+G QLVL+E PNK+
Sbjct: 342 YSMREKTPAHRHDVDDVPEEVKQRRLSELIATFKRSSAARYHSQLGKTQLVLIEAPNKRN 401
Query: 508 PDTELVGKSDRGHRVAF 524
P+ E G+ D G +V F
Sbjct: 402 PN-EWGGRCDSGQKVFF 417
>gi|395509649|ref|XP_003759107.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 1
[Sarcophilus harrisii]
Length = 593
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/510 (54%), Positives = 361/510 (70%), Gaps = 29/510 (5%)
Query: 24 LSRNFSHSSLDLPDGPGLHHFIAQSSLT---------ASQPLADLAPASEVSSATGSEVH 74
+ R+FS L GP HF+ +++LT +S + DL P + G
Sbjct: 52 VQRDFSSR---LATGPTFQHFL-RNALTPQEESEKSDSSAAVEDLPPYLSTEALVGK--- 104
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
+ ++Y ETYGCQMNVND EI SI++ GY ++ E A+VI + TC+IR+ AE +W
Sbjct: 105 -RRKVYLETYGCQMNVNDAEIAWSILEKNGYLRTNSLHE-ADVILLVTCSIREKAEQAIW 162
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
RL K+V R +S+ P +I +LGCMAERLK++IL +++VD++ GPD+Y
Sbjct: 163 HRLKRL--------KSVKARRLKSQVPLRIGILGCMAERLKEEILQREQLVDIIAGPDSY 214
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
RDLPRLL D GQ+ N LLSLEETYADI PV+ S N+ +AFVS+MRGC+NMCS+CIVP
Sbjct: 215 RDLPRLLTLADSGQRSANVLLSLEETYADIMPVQTSPNATSAFVSIMRGCDNMCSYCIVP 274
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
FTRGRERSRPV SI++EV +L ++G+KEVTLLGQNVNSY D S E + A LS G
Sbjct: 275 FTRGRERSRPVASILEEVKKLSEQGLKEVTLLGQNVNSYRDNS--EIQFNNAAPTNLSRG 332
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F++ K+KK GLRFADLLD++S PEMR R+TSPHPKDFPDE+L+++++R N+CK IHL
Sbjct: 333 FSANYKMKKGGLRFADLLDQVSRIDPEMRIRFTSPHPKDFPDEVLHLIQERNNICKQIHL 392
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
PAQ+G+S VLE MRRGYTREAYLDL+ IR+ IP V LSSDFI GFCGETEE+H TL+L
Sbjct: 393 PAQSGSSRVLEIMRRGYTREAYLDLIHHIRETIPGVSLSSDFIAGFCGETEEDHLQTLSL 452
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V Y++ ++FAYSMR++T A+ DDVPEEVKQRRL ELI AFRE + + VG
Sbjct: 453 LREVRYNVGFLFAYSMRQKTRAYHRLQDDVPEEVKQRRLAELITAFREGAAEANMAVVGH 512
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
QL+LVEGP+K++ TEL G++D +V F
Sbjct: 513 TQLILVEGPSKRS-TTELCGRNDGNIKVIF 541
>gi|440793540|gb|ELR14719.1| CDK5 regulatory subunit associated protein 1, putative
[Acanthamoeba castellanii str. Neff]
Length = 565
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/454 (56%), Positives = 341/454 (75%), Gaps = 13/454 (2%)
Query: 71 SEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAE 130
SE + +++ ETYGCQMN +D EIV+SIM+ AGY E + ++A++IF+NTCAIRD AE
Sbjct: 62 SENTPKRKVFMETYGCQMNSSDSEIVMSIMQKAGYEETAAL-DDADIIFVNTCAIRDNAE 120
Query: 131 HKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCG 190
KVW RLN+F +KR K QSK + VLGCMAERLK ++L++DK+VD+V G
Sbjct: 121 RKVWDRLNHFKNMKRANK--------QSKR--VVGVLGCMAERLKSRLLESDKLVDLVVG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
PDAYR LP LL EV+ GQ +N LS+EETYADI PVR + N+++A++S+MRGCNNMCS+
Sbjct: 171 PDAYRSLPSLLTEVESGQTAMNVQLSMEETYADIRPVRTTSNNLSAYLSIMRGCNNMCSY 230
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
CIVPFTRGRERSRP+ SI+ EV +L +GVKEV LLGQNVNSYND S V
Sbjct: 231 CIVPFTRGRERSRPIASILDEVRQLSDQGVKEVVLLGQNVNSYNDLSEQTFPVSDPTQL- 289
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
LS+GF SM K G+RF L+D++S PEMR R+TSPHPKDFPD+LL+++ +RPN+C
Sbjct: 290 LSKGFGSMVKPNPGGVRFTQLMDQVSRIDPEMRVRFTSPHPKDFPDDLLHLIAERPNLCN 349
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+H+PAQ+GNS VL MRR YTREAYL+L+Q++R++IP+VGLSSDFI GFCGETEE H D
Sbjct: 350 AVHIPAQSGNSEVLHNMRRFYTREAYLELIQRMREVIPNVGLSSDFISGFCGETEEHHQD 409
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL+L++ V +D A+MFAYSMRE+T+AHR D+VPEEVKQ+RL E+I+ F + +
Sbjct: 410 TLSLLREVRFDQAFMFAYSMREKTNAHRTLQDNVPEEVKQQRLKEVIQTFFATLAEKSRE 469
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++G LVLVEG ++++ D +L+G++D +V F
Sbjct: 470 EIGRRHLVLVEGTSRRSSD-DLMGRTDNNKKVVF 502
>gi|427785585|gb|JAA58244.1| Putative cdk5 activator-binding protein [Rhipicephalus pulchellus]
Length = 585
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/495 (53%), Positives = 353/495 (71%), Gaps = 22/495 (4%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIV 96
GP L HFIA S+ + ++ L A + T EV ++G+ ++ ETYGCQMNVND E+
Sbjct: 44 GPSLEHFIANSANSLTE-LPRSAEQFQHPYVTADEVQAKGKKVHFETYGCQMNVNDTEVA 102
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKR----EWKKNVA 152
S++K+AG+ N A+V+ I TCAIR+ AE K+W R+N LK+ +W+
Sbjct: 103 WSLLKDAGFVRT-NSASEADVVLIMTCAIREGAEGKIWSRINQLKHLKKLRHADWRG--- 158
Query: 153 TGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 212
P +I +LGCMAERLK+K+++ +K VD+V GPD+YRDLPRLL GQ G+N
Sbjct: 159 --------PLQIGILGCMAERLKEKLIEKEKAVDIVAGPDSYRDLPRLLALAHSGQVGVN 210
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LSL+ETYAD+ PVR+++NS +AFVS+MRGCNNMCS+CIVPFTRGRERSRP+ SI+ EV
Sbjct: 211 VQLSLDETYADVVPVRLNENSKSAFVSIMRGCNNMCSYCIVPFTRGRERSRPLASILDEV 270
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEK---EVEPGANWRLSEGFNSMCKVKKMGLRFA 329
L +GVKEVTLLGQNVNSY DTS + E LS GF ++ K+ GLRFA
Sbjct: 271 RALSDQGVKEVTLLGQNVNSYRDTSAESQALIERSKDGPEILSRGFRTVYKLPVGGLRFA 330
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
DLLDR+S EMR R+TSPHPKDFPDE+L ++RDR N+CK IHLPAQ+GN+A+LERMRR
Sbjct: 331 DLLDRVSQVDKEMRIRFTSPHPKDFPDEVLEVIRDRDNICKQIHLPAQSGNNAILERMRR 390
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GYTREAYL+LV +IR ++P+V LSSDFICGFCGETE H DT++L+ V Y +AY+F YS
Sbjct: 391 GYTREAYLELVDRIRDVLPNVALSSDFICGFCGETEAAHEDTMSLVDQVKYSVAYVFPYS 450
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
+RE+THAHR D VP +VK+RR+ E++ FR + + Q+ T QLVLVEG ++++P+
Sbjct: 451 LREKTHAHRRLEDGVPLDVKKRRVGEVLSLFRRHAKELFVQQISTHQLVLVEGVSRRSPE 510
Query: 510 TELVGKSDRGHRVAF 524
++ G++D +V F
Sbjct: 511 -DMAGRNDNNVKVVF 524
>gi|334310918|ref|XP_001381790.2| PREDICTED: CDK5 regulatory subunit-associated protein 1
[Monodelphis domestica]
Length = 590
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 271/502 (53%), Positives = 351/502 (69%), Gaps = 16/502 (3%)
Query: 24 LSRNFSHSSLDLPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQE 82
L R+FS L GP HF+ +S+ + + T + +GR +Y E
Sbjct: 52 LQRDFSSR---LAAGPTFQHFLRNASVPQEKSDSSATVEDPPPYLTPEALLGRGRKVYLE 108
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVND EI +I++ +GY N A+VI + TC+IR+ AE +W RL F
Sbjct: 109 TYGCQMNVNDAEIAWAILQKSGYLRT-NTLHEADVILLVTCSIREKAEQAIWNRLKRLKF 167
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
+K R +S+ P +I +LGCMAERLK++IL +K+VD+V GPDAYRDLPRLL
Sbjct: 168 IK--------ARRLRSQVPLRIGILGCMAERLKEEILHREKLVDIVAGPDAYRDLPRLLS 219
Query: 203 EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERS 262
D GQ+ N LLSLEETYADI PV+ S N+ +AFVS+MRGC+NMCS+CIVPFTRGRERS
Sbjct: 220 LADSGQRSANVLLSLEETYADIMPVQTSSNATSAFVSIMRGCDNMCSYCIVPFTRGRERS 279
Query: 263 RPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVK 322
RP+ SI++EV +L ++G+KEVTLLGQNVNSY D S M+ LS GF+ K K
Sbjct: 280 RPIASILEEVKKLSQQGLKEVTLLGQNVNSYQDKSEMQ--FNNAMPTHLSRGFSENYKTK 337
Query: 323 KMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSA 382
K GLRFADLLD++S PEMR R+TSPHPKDFPDE+L ++++R N+CK IHLPAQ+G++
Sbjct: 338 KGGLRFADLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIQERNNICKQIHLPAQSGSNR 397
Query: 383 VLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDM 442
VLE MRRGYTREAYLDL+ IR+ + V LSSDFI GFCGETE++H TL+L++ V Y++
Sbjct: 398 VLELMRRGYTREAYLDLIHHIRESVSGVNLSSDFIAGFCGETEDDHLQTLSLLQEVRYNV 457
Query: 443 AYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEG 502
++FAYSMR++T A+ DDVPEEVKQRRL ELI AFRE + + VG +QL+LVEG
Sbjct: 458 GFLFAYSMRQKTRAYHRLQDDVPEEVKQRRLAELIAAFREGATEANMAMVGHMQLILVEG 517
Query: 503 PNKKAPDTELVGKSDRGHRVAF 524
P+K++ TEL G++D RV F
Sbjct: 518 PSKRS-TTELCGRNDGNIRVIF 538
>gi|395509651|ref|XP_003759108.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 2
[Sarcophilus harrisii]
Length = 607
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 276/524 (52%), Positives = 361/524 (68%), Gaps = 43/524 (8%)
Query: 24 LSRNFSHSSLDLPDGPGLHHFIAQSSLT---------ASQPLADLAPASEVSSATGSEVH 74
+ R+FS L GP HF+ +++LT +S + DL P + G
Sbjct: 52 VQRDFSSR---LATGPTFQHFL-RNALTPQEESEKSDSSAAVEDLPPYLSTEALVGK--- 104
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
+ ++Y ETYGCQMNVND EI SI++ GY ++ E A+VI + TC+IR+ AE +W
Sbjct: 105 -RRKVYLETYGCQMNVNDAEIAWSILEKNGYLRTNSLHE-ADVILLVTCSIREKAEQAIW 162
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
RL K+V R +S+ P +I +LGCMAERLK++IL +++VD++ GPD+Y
Sbjct: 163 HRLKRL--------KSVKARRLKSQVPLRIGILGCMAERLKEEILQREQLVDIIAGPDSY 214
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
RDLPRLL D GQ+ N LLSLEETYADI PV+ S N+ +AFVS+MRGC+NMCS+CIVP
Sbjct: 215 RDLPRLLTLADSGQRSANVLLSLEETYADIMPVQTSPNATSAFVSIMRGCDNMCSYCIVP 274
Query: 255 FTRGRERSRPVESIVKEVDEL--------------WKEGVKEVTLLGQNVNSYNDTSGME 300
FTRGRERSRPV SI++EV +L + +G+KEVTLLGQNVNSY D S E
Sbjct: 275 FTRGRERSRPVASILEEVKKLSEQVFLPLQDPSLVFLQGLKEVTLLGQNVNSYRDNS--E 332
Query: 301 KEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
+ A LS GF++ K+KK GLRFADLLD++S PEMR R+TSPHPKDFPDE+L+
Sbjct: 333 IQFNNAAPTNLSRGFSANYKMKKGGLRFADLLDQVSRIDPEMRIRFTSPHPKDFPDEVLH 392
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
++++R N+CK IHLPAQ+G+S VLE MRRGYTREAYLDL+ IR+ IP V LSSDFI GF
Sbjct: 393 LIQERNNICKQIHLPAQSGSSRVLEIMRRGYTREAYLDLIHHIRETIPGVSLSSDFIAGF 452
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGETEE+H TL+L++ V Y++ ++FAYSMR++T A+ DDVPEEVKQRRL ELI AF
Sbjct: 453 CGETEEDHLQTLSLLREVRYNVGFLFAYSMRQKTRAYHRLQDDVPEEVKQRRLAELITAF 512
Query: 481 RESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
RE + + VG QL+LVEGP+K++ TEL G++D +V F
Sbjct: 513 REGAAEANMAVVGHTQLILVEGPSKRS-TTELCGRNDGNIKVIF 555
>gi|346469091|gb|AEO34390.1| hypothetical protein [Amblyomma maculatum]
Length = 588
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/501 (53%), Positives = 358/501 (71%), Gaps = 32/501 (6%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVH---------SQGR-IYQETYGCQ 87
GP L +FIA S D + ++ +T S H S+G+ ++ ETYGCQ
Sbjct: 45 GPSLGYFIANS--------VDNDTEAGITCSTDSPQHPYVLAEDVLSKGKKVHFETYGCQ 96
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MNVND E+ S++K+AG+ + +V E A+V+ I TCAIR+ AE K+WQR+ +KR
Sbjct: 97 MNVNDTEVAWSLLKHAGFEKTNSVSE-ADVVLIMTCAIREGAEGKIWQRIRQLKAVKRL- 154
Query: 148 KKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDY 206
R +SK+ P +I +LGCMAERLK+K+++ +K VD+V GPD+YRDLPRLL
Sbjct: 155 -------RHESKNGPLQIGILGCMAERLKEKLVEKEKAVDIVAGPDSYRDLPRLLASARS 207
Query: 207 GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVE 266
GQ G+N LSL+ETYA++ PVR+ ++S +AFVS+MRGCNNMCS+CIVPFTRGRERSRP+
Sbjct: 208 GQVGVNVQLSLDETYANVVPVRLKEDSKSAFVSIMRGCNNMCSYCIVPFTRGRERSRPLA 267
Query: 267 SIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV---EPGANWRLSEGFNSMCKVKK 323
+I+ EV L +GVKEVTLLGQNVNSY DTS + + LS GF ++ K+
Sbjct: 268 TILDEVRALSDQGVKEVTLLGQNVNSYRDTSAESQALIDRSRDGPAVLSRGFRTIYKLPS 327
Query: 324 MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAV 383
GLRFADLLD++S EMR R+TSPHPKDFPDE+L ++RDR N+CK IHLPAQ+GNSA+
Sbjct: 328 GGLRFADLLDKVSQIDREMRIRFTSPHPKDFPDEVLEVIRDRDNICKQIHLPAQSGNSAI 387
Query: 384 LERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMA 443
LERMRRGYTREAYL+LV +IR ++P+V L+SDFICGFCGETEE H DT++L+ V Y +A
Sbjct: 388 LERMRRGYTREAYLELVHRIRDVLPNVALTSDFICGFCGETEEAHQDTISLVNQVQYSVA 447
Query: 444 YMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGP 503
Y+F YS+RE+THAHR DDVP +VK+RR+ E++ FR + +D QV + QLVLVEG
Sbjct: 448 YVFPYSLREKTHAHRRLEDDVPLDVKKRRVGEVLAVFRRRAKELFDQQVSSHQLVLVEGI 507
Query: 504 NKKAPDTELVGKSDRGHRVAF 524
++++P+ +L G++D +V F
Sbjct: 508 SRRSPE-DLFGRNDNNIKVIF 527
>gi|426241330|ref|XP_004014544.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 [Ovis
aries]
Length = 588
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/493 (53%), Positives = 352/493 (71%), Gaps = 19/493 (3%)
Query: 35 LPDGPGLHHFIAQSSLTASQP---LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP F+ +S+T QP + D P V G Q R+Y ETYGCQMNVN
Sbjct: 60 LATGPTFQDFLRSASVTPEQPSSEVEDPPPYLTVDELLGR----QRRVYLETYGCQMNVN 115
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ K++
Sbjct: 116 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQL--------KSL 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
+ R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 KSKRLRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 226
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++E
Sbjct: 227 NVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILEE 286
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + + LS GF++ K K+ GLRFA L
Sbjct: 287 VRKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVSTNLSRGFSTNYKAKQGGLRFAHL 344
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 345 LDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 404
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++L+Q IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y++ ++FAYSMR
Sbjct: 405 SREAYVELIQHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVRYNIGFLFAYSMR 464
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
++T A+ DD+PEEVK RRL ELI FRE + S VG QLVLVEGP+K++ T+
Sbjct: 465 QKTRAYHRLKDDIPEEVKLRRLEELITVFREEATKANKSFVGCTQLVLVEGPSKRSA-TD 523
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 524 LCGRNDGNLKVIF 536
>gi|301765780|ref|XP_002918310.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Ailuropoda melanoleuca]
Length = 583
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/494 (53%), Positives = 353/494 (71%), Gaps = 17/494 (3%)
Query: 32 SLDLPDGPGLHHFIAQSSLTASQP-LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
S L +GP HF+ +S QP + D P V G Q ++Y ETYGCQMNV
Sbjct: 54 SSKLANGPTFQHFLRSASAPQEQPDVEDPPPYLTVDELLGR----QRKVYLETYGCQMNV 109
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 110 NDTEIAWSILQKSGYLRTRNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------ 162
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 163 --TKRLRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQA 220
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV+SI++
Sbjct: 221 ANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVDSILE 280
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV +L ++G+KEVTLLGQNVNS+ D+S E + + LS GF++ K K+ GLRFA
Sbjct: 281 EVRKLSEQGLKEVTLLGQNVNSFRDSS--EVQFNNAVSTNLSRGFSTNYKPKQGGLRFAH 338
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD++S PEMR R+TSPHPKDFPDE+L ++++R N+CK IHLPAQ+G+S VLE MRRG
Sbjct: 339 LLDKVSRIDPEMRIRFTSPHPKDFPDEVLQLIQERDNICKQIHLPAQSGSSRVLEAMRRG 398
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAY++L+ IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSM
Sbjct: 399 YSREAYVELIHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYNMGFLFAYSM 458
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T
Sbjct: 459 RQKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANMASVGCTQLVLVEGHSKRSA-T 517
Query: 511 ELVGKSDRGHRVAF 524
+L G++D +V F
Sbjct: 518 DLCGRNDGNLKVIF 531
>gi|241560240|ref|XP_002400838.1| CDK5 regulatory subunit-associated protein, putative [Ixodes
scapularis]
gi|215499787|gb|EEC09281.1| CDK5 regulatory subunit-associated protein, putative [Ixodes
scapularis]
Length = 547
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/500 (53%), Positives = 356/500 (71%), Gaps = 25/500 (5%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR---IYQETYGCQMNVN 91
+ +GP L HFIA S S+ +DL +E E + R +Y ETYGCQMNVN
Sbjct: 3 IENGPSLQHFIANS---LSEKQSDLTEGAEAPHPYVREPDVRVRDRSVYFETYGCQMNVN 59
Query: 92 DMEIVLSIMKNAGYS--EVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKK 149
D E+ S++K+AG++ E +NV A+V+ I TCAIR+ AE K+W R+N LK+ ++
Sbjct: 60 DTEVAWSVLKSAGFTKTEDVNV---ADVVLIMTCAIREGAESKIWSRINQLKALKKARRR 116
Query: 150 NVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQK 209
+ S+ P +I +LGCMAERLK+K+++ +K VD+V GPD+YRDLPRLL GQ
Sbjct: 117 S-------SRGPMQIGILGCMAERLKEKLVEREKEVDIVAGPDSYRDLPRLLRVATSGQV 169
Query: 210 GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
G+N LLSL+ETYAD+ PVR+++N+ +A+VS+MRGCNNMC++CIVPFTRGRERSRPV SI+
Sbjct: 170 GVNVLLSLDETYADVVPVRLTENAKSAYVSIMRGCNNMCTYCIVPFTRGRERSRPVTSIL 229
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV----EPGANWRLSEGFNSMCKVKKMG 325
EV L ++GVKEV LLGQNVNSY DTS + + PG + LS GF ++ K + G
Sbjct: 230 DEVRALSEQGVKEVILLGQNVNSYRDTSAESQALIARPAPG-DVLLSRGFRTVYKTQLGG 288
Query: 326 LRFADLLDRLSLEFPEMRFRYT-SPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVL 384
+RF DLLDR+S PEMR R+T + + + +L +++DR N+CK IHLPAQ+GNS VL
Sbjct: 289 VRFVDLLDRVSQVDPEMRIRFTCRANARTYGGRVLEVIQDRHNICKQIHLPAQSGNSRVL 348
Query: 385 ERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAY 444
E MRRGYTREAYLDLV IR +PDV L+SDFICGFCGETEE H DTL+L++AV YDMAY
Sbjct: 349 ETMRRGYTREAYLDLVAHIRTFLPDVALTSDFICGFCGETEEAHRDTLSLVEAVQYDMAY 408
Query: 445 MFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPN 504
+F YS+RE+THAHR DDVP EVK+RR+ E++ FR Q +D QVG++QLVLVEG +
Sbjct: 409 VFPYSLREKTHAHRRLEDDVPLEVKKRRVAEVLAVFRRRVKQLHDKQVGSLQLVLVEGVS 468
Query: 505 KKAPDTELVGKSDRGHRVAF 524
+++ +L G++D +V F
Sbjct: 469 RRSA-ADLAGRNDNNTKVIF 487
>gi|405969792|gb|EKC34743.1| CDK5 regulatory subunit-associated protein 1 [Crassostrea gigas]
Length = 628
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/538 (51%), Positives = 365/538 (67%), Gaps = 33/538 (6%)
Query: 3 LDPRCARRLTTRQL--KRSFSLNLSRNFSHSSLDLPDGPGLHHFIAQSSLTASQ----PL 56
L P CARRL R + +H + L GP L HFIA S T +
Sbjct: 28 LAPWCARRLHLSNYVNHRFDQFEDTDKRTHFNEKLEKGPSLQHFIANSGETIDNYEQVSV 87
Query: 57 ADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAE 116
+ P E +G H + ++Y +TYGCQMN ND EI SI+K+ GY++ ++ E A+
Sbjct: 88 GERVPYLEEELYSG---HGR-KVYFDTYGCQMNFNDTEIAWSILKDKGYAKAESINE-AD 142
Query: 117 VIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKD 176
VI + TC+IRD AE K+W +N + LKR R K P KI +LGCMAERLK
Sbjct: 143 VILLMTCSIRDNAEQKIWNMVNIYKGLKR---------RGGKKKPLKIGILGCMAERLKH 193
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEEVD-YGQKGINTLLSLEETYADISPVRISKNSVT 235
KILD +KMVD+VCGPDAYRDLPRLL GQ +N LLSLEETYAD+ PVRI+ N+ T
Sbjct: 194 KILDKEKMVDLVCGPDAYRDLPRLLSVTSGSGQSAVNVLLSLEETYADVMPVRINSNAKT 253
Query: 236 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYND 295
AFVS+ RGCNNMCS+CIVP+TRGRERSRPV SIV+EV +L +G+KEVTLLGQNVNSY D
Sbjct: 254 AFVSITRGCNNMCSYCIVPYTRGRERSRPVSSIVEEVRKLSDQGIKEVTLLGQNVNSYCD 313
Query: 296 TS------GM-EKEVEPGA----NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRF 344
S G+ E + G N LS GF ++ K++ G RF+ LLD++S P+MR
Sbjct: 314 KSEEDHYGGLPNSEAQGGGSAGENTVLSRGFKTIYKLQSGGRRFSHLLDQVSRIDPDMRV 373
Query: 345 RYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIR 404
R+TSPHPKDFPDE+LY+++DRPN+C IHLPAQ+G++A+L+ MRRG+TREAYLDLV IR
Sbjct: 374 RFTSPHPKDFPDEVLYLIKDRPNICNKIHLPAQSGSTAMLQAMRRGHTREAYLDLVHHIR 433
Query: 405 QIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDV 464
+IIPDV L+SDFI GFCGETEE+H DT++L++ V + Y F YSMR++THA+ + D V
Sbjct: 434 EIIPDVALTSDFIVGFCGETEEDHRDTVSLIEQVKFHYVYQFPYSMRQKTHAYHHLKDTV 493
Query: 465 PEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
PE VK+RR E+I+ R+ + SQ+G QL+L+EG +K++ +++ G++D G +V
Sbjct: 494 PESVKKRRTQEVIDCARQGMLRLNQSQIGQEQLILIEGHSKRST-SDMWGRNDGGTKV 550
>gi|194044464|ref|XP_001928891.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 [Sus
scrofa]
Length = 589
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/494 (53%), Positives = 350/494 (70%), Gaps = 20/494 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQP----LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
L GP HF+ +S+ +P + D P V G Q ++Y ETYGCQMNV
Sbjct: 60 LASGPTFQHFLRSASVPQEKPPSPDVEDPPPYLTVDELLGK----QRKVYLETYGCQMNV 115
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 116 NDTEIAWSILQKNGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------ 168
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
+ R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 169 --SKRLRSQVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQA 226
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++
Sbjct: 227 ANVLLSLDETYADVLPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILE 286
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV +L ++G+KEVTLLGQNVNS+ DTS E + + LS GF+S K K+ GLRFA
Sbjct: 287 EVRKLSEQGLKEVTLLGQNVNSFRDTS--EVQFNNAVSTNLSRGFSSNYKTKQGGLRFAH 344
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD++S PEMR R+TSPHPKDFPDE+L ++ DR N+CK IHLPAQ+G+S VLE MRRG
Sbjct: 345 LLDQVSQIDPEMRIRFTSPHPKDFPDEVLQLIHDRDNICKQIHLPAQSGSSRVLEAMRRG 404
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSM
Sbjct: 405 YSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLQEVQYNMGFLFAYSM 464
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R++T A+ DD+PEEVK RRL ELI FRE + + VG +QLVLVEG +K++ T
Sbjct: 465 RQKTRAYHRLKDDIPEEVKLRRLEELITVFREEATKANKTFVGCIQLVLVEGFSKRS-ST 523
Query: 511 ELVGKSDRGHRVAF 524
+L G++D +V F
Sbjct: 524 DLCGRNDGNLKVIF 537
>gi|403281254|ref|XP_003932108.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 [Saimiri
boliviensis boliviensis]
Length = 587
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/493 (54%), Positives = 348/493 (70%), Gaps = 19/493 (3%)
Query: 35 LPDGPGLHHFIAQSSL---TASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP L HF+ +S S + D P GS Q ++Y ETYGCQMNVN
Sbjct: 59 LATGPTLQHFLRSASAPQEKLSSEMEDPPPYLMKDELLGS----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKVLK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVDV+ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRLRSRVPLRIGILGCMAERLKEEILNREKMVDVLAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMC++CIVPFTRGRERSRPV SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCTYCIVPFTRGRERSRPVASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + A+ LS GF + K K+ GLRFA L
Sbjct: 286 VRKLSEQGLKEVTLLGQNVNSFRDNS--EIQFNNAASTNLSRGFTTNYKTKQGGLRFAHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERENICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR
Sbjct: 404 SREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMR 463
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T+
Sbjct: 464 QKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANQTSVGCTQLVLVEGLSKRSA-TD 522
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 523 LCGRNDGNLKVIF 535
>gi|50758889|ref|XP_417464.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 [Gallus
gallus]
Length = 562
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/491 (53%), Positives = 343/491 (69%), Gaps = 21/491 (4%)
Query: 34 DLPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDM 93
+LP GP L HF+ ++ + P S G++Y ETYGCQMNVND
Sbjct: 41 ELPSGPDLRHFLRGAAAPPPAGEPEPEPGS---------TSGLGKVYLETYGCQMNVNDT 91
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
EI +I++ +GY+ E A+VI + TC++RD AE +W RL + LK
Sbjct: 92 EIAWAILQKSGYTRTKEADE-ADVILLVTCSVRDKAEQTIWNRLQHLKALKAR------- 143
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINT 213
R Q+ P +I +LGCMAERLK++IL +K+VD+V GPDAYRDLPRLL + GQ+ N
Sbjct: 144 -RHQACLPLRIGILGCMAERLKEEILHREKLVDIVAGPDAYRDLPRLLAMAESGQQAANV 202
Query: 214 LLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVD 273
LLSL+ETYADI PV+ S TAFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++EV
Sbjct: 203 LLSLDETYADILPVQTSAGGKTAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILQEVK 262
Query: 274 ELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLD 333
L +GVKEVTLLGQNVNS+ D S E + + A LS GF+++ K K GLRFA LLD
Sbjct: 263 MLSDQGVKEVTLLGQNVNSFRDMS--EVQFQSAAAPVLSRGFSTVYKTKPGGLRFAHLLD 320
Query: 334 RLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTR 393
++S PEMR R+TSPHPKDFPDE+L ++++R N+CK +HLPAQ+G++ VLE MRRGYTR
Sbjct: 321 QVSRIDPEMRIRFTSPHPKDFPDEVLQLIQERHNICKQLHLPAQSGSTRVLEAMRRGYTR 380
Query: 394 EAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRER 453
EAYL+LVQ +R IP V LSSDFI GFCGETEE+H T++L++ V Y++ ++FAYSMR++
Sbjct: 381 EAYLELVQHVRNTIPGVSLSSDFIAGFCGETEEDHQQTVSLLREVRYNIGFLFAYSMRQK 440
Query: 454 THAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELV 513
T A+ DDVP +VKQRRL ELI FRE + ++ VG QLVLVEGP+K++ +EL
Sbjct: 441 TRAYHRLQDDVPADVKQRRLEELITVFREEAARANEAMVGQSQLVLVEGPSKRSA-SELC 499
Query: 514 GKSDRGHRVAF 524
G++D +V F
Sbjct: 500 GRNDGNIKVIF 510
>gi|115497176|ref|NP_001069114.1| CDK5 regulatory subunit-associated protein 1 [Bos taurus]
gi|115304933|gb|AAI23653.1| CDK5 regulatory subunit associated protein 1 [Bos taurus]
gi|296481106|tpg|DAA23221.1| TPA: CDK5 regulatory subunit associated protein 1 [Bos taurus]
Length = 589
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/494 (53%), Positives = 350/494 (70%), Gaps = 20/494 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQP----LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
L GP F+ +S+ QP + D P V G Q R+Y ETYGCQMNV
Sbjct: 60 LATGPTFQDFLRSASVPPEQPSSSEVEDPPPYLTVDELLGR----QRRVYLETYGCQMNV 115
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ K+
Sbjct: 116 NDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQL--------KS 166
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
+ + R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLP+LL + GQ+
Sbjct: 167 LKSKRLRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPQLLAVAESGQQA 226
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++
Sbjct: 227 ANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILE 286
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV +L ++G+KEVTLLGQNVNS+ D S E + + LS GF++ K K+ GLRFA
Sbjct: 287 EVRKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVSTNLSRGFSTNYKAKQGGLRFAH 344
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD++S PEMR R+TSPHPKDFPDE+L ++R+R N+CK IHLPAQ+G+S VLE MRRG
Sbjct: 345 LLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERDNICKQIHLPAQSGSSRVLEAMRRG 404
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAY++L+ IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y++ ++FAYSM
Sbjct: 405 YSREAYVELIHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYNIGFLFAYSM 464
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R++T A+ DD+PEEVK RRL ELI FRE + S VG QLVLVEGP+K++
Sbjct: 465 RQKTRAYHRLKDDIPEEVKLRRLEELITVFREEATKANKSFVGCTQLVLVEGPSKRSA-A 523
Query: 511 ELVGKSDRGHRVAF 524
+L G++D +V F
Sbjct: 524 DLCGRNDGNLKVIF 537
>gi|73992243|ref|XP_534385.2| PREDICTED: CDK5 regulatory subunit-associated protein 1 [Canis
lupus familiaris]
Length = 583
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/491 (53%), Positives = 348/491 (70%), Gaps = 17/491 (3%)
Query: 35 LPDGPGLHHFIAQSSLTASQP-LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDM 93
L GP HF+ +S +P + D P V G Q ++Y ETYGCQMNVND
Sbjct: 57 LATGPTFQHFLRSASAPQEKPDMEDPPPYVTVEELLGR----QRKVYLETYGCQMNVNDT 112
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
EI S+++ +GY N+ E A+VI + TC+IR+ AE +W RL LK T
Sbjct: 113 EIAWSVLQKSGYLRTRNLQE-ADVILLVTCSIREKAEQTIWNRLQQLKALK--------T 163
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINT 213
R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+ N
Sbjct: 164 KRLRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANV 223
Query: 214 LLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVD 273
LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++EV
Sbjct: 224 LLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILEEVR 283
Query: 274 ELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLD 333
+L ++G+KEVTLLGQNVNS+ D+S E + + LS GF++ K KK GLRF LLD
Sbjct: 284 KLSEQGLKEVTLLGQNVNSFQDSS--EVQFNNAVSTNLSRGFSTNYKPKKGGLRFTYLLD 341
Query: 334 RLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTR 393
++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY+R
Sbjct: 342 QVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGYSR 401
Query: 394 EAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRER 453
EAY++L+ IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR++
Sbjct: 402 EAYVELIHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYNMGFLFAYSMRQK 461
Query: 454 THAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELV 513
T A+ DDVPEEVK RRL ELI FRE + + VG+ QLVLVEG +K++ T+L
Sbjct: 462 TRAYHRLKDDVPEEVKLRRLEELITVFREEATKANMASVGSTQLVLVEGVSKRSA-TDLC 520
Query: 514 GKSDRGHRVAF 524
G++D +V F
Sbjct: 521 GRNDGNLKVIF 531
>gi|432101484|gb|ELK29666.1| CDK5 regulatory subunit-associated protein 1 [Myotis davidii]
Length = 614
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/494 (53%), Positives = 348/494 (70%), Gaps = 20/494 (4%)
Query: 35 LPDGPGLHHFIAQSSL----TASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
L GP HF+ +S+ AS + D P V G Q ++Y ETYGCQMNV
Sbjct: 60 LATGPTFQHFLRSASVPQEKLASSDVVDPPPYLTVDELLGR----QRKVYLETYGCQMNV 115
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 116 NDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------ 168
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
T R +S+ P KI +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 169 --TKRLRSRVPLKIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLTVAESGQQA 226
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++
Sbjct: 227 ANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILE 286
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV +L ++G+KEVTLLGQNVNSY D S E + + LS GF++ K K+ GLRFA
Sbjct: 287 EVRKLSEQGLKEVTLLGQNVNSYRDNS--EVQFNNAVSTNLSRGFSTNYKTKQGGLRFAH 344
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRG
Sbjct: 345 LLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRG 404
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAY++L+ +R+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSM
Sbjct: 405 YSREAYVELIHHVRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYNMGFLFAYSM 464
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R++T A+ DDV EEVK RRL ELI FRE + + VG QLVLVEG +K++ T
Sbjct: 465 RQKTRAYHRLKDDVLEEVKLRRLEELITVFREEATKANKTSVGCTQLVLVEGLSKRSA-T 523
Query: 511 ELVGKSDRGHRVAF 524
EL G++D +V F
Sbjct: 524 ELCGRNDGNLKVIF 537
>gi|380022835|ref|XP_003695241.1| PREDICTED: CDK5RAP1-like protein-like [Apis florea]
Length = 599
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/448 (57%), Positives = 327/448 (72%), Gaps = 13/448 (2%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
S ++Y E YGCQMNVND E++ SI+K+ GY +V N+ E A +I + TC+IRD AE KVW
Sbjct: 109 SDQKVYFEVYGCQMNVNDTEVIWSILKSHGYKKVENITE-ANIILLITCSIRDNAEQKVW 167
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
+LN +++++ K+ HP KI +LGCMAERLKDKIL+ K+VDV+ GPD+Y
Sbjct: 168 NKLNNLNYIRKKKKQ----------HPIKIGLLGCMAERLKDKILERGKLVDVIAGPDSY 217
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
+DLPRLL D + IN LLS +ETYADI+PVR++ NS +AFV++MRGC+NMC++CIVP
Sbjct: 218 KDLPRLLSIPD-NETAINVLLSFDETYADITPVRLNSNSTSAFVTIMRGCDNMCTYCIVP 276
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
FTRGRERSRP+ESIVKEV L +GVKE+ LLGQNVNSY D S E L++G
Sbjct: 277 FTRGRERSRPIESIVKEVQSLSDDGVKEIVLLGQNVNSYRDISQSEFYTINNMETHLAKG 336
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F ++ K KK G RF DLLD +S PEMR R+TSPHPKDFPDE+L ++ +RPN+CK IHL
Sbjct: 337 FKTVYKNKKGGRRFCDLLDEVSRINPEMRIRFTSPHPKDFPDEVLQLIAERPNICKEIHL 396
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
PAQ+GNS +LERMRRGYTREAY+DLV IRQIIP++ LSSDFI GFCGETEEE DTL+L
Sbjct: 397 PAQSGNSRILERMRRGYTREAYIDLVHHIRQIIPNIYLSSDFITGFCGETEEEFQDTLSL 456
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V Y+ A++F+YSMRE+T AHR Y DDV VKQ RL +I +R + Q+G
Sbjct: 457 IELVKYNRAFLFSYSMREKTTAHRRYQDDVSPNVKQDRLERMISIYRTEAEKLNKLQIGQ 516
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRV 522
QLVLVE +K++ D+ K+D RV
Sbjct: 517 SQLVLVEKLSKRSHDS-FQTKNDGNTRV 543
>gi|397487345|ref|XP_003814761.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 1
[Pan paniscus]
Length = 587
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/493 (53%), Positives = 345/493 (69%), Gaps = 19/493 (3%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLTMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA L
Sbjct: 286 VKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVPTNLSRGFTTNYKTKQGGLRFAHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR
Sbjct: 404 SREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMR 463
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T+
Sbjct: 464 QKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSKRSA-TD 522
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 523 LCGRNDGNLKVIF 535
>gi|28872782|ref|NP_057492.2| CDK5 regulatory subunit-associated protein 1 isoform a [Homo
sapiens]
gi|29791797|gb|AAH50706.1| CDK5 regulatory subunit associated protein 1 [Homo sapiens]
gi|119596729|gb|EAW76323.1| CDK5 regulatory subunit associated protein 1, isoform CRA_f [Homo
sapiens]
gi|208965952|dbj|BAG72990.1| CDK5 regulatory subunit associated protein 1 [synthetic construct]
Length = 587
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/493 (53%), Positives = 345/493 (69%), Gaps = 19/493 (3%)
Query: 35 LPDGPGLHHFIAQSSL---TASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA L
Sbjct: 286 VKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR
Sbjct: 404 SREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMR 463
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T+
Sbjct: 464 QKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSKRSA-TD 522
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 523 LCGRNDGNLKVIF 535
>gi|431894301|gb|ELK04101.1| CDK5 regulatory subunit-associated protein 1 [Pteropus alecto]
Length = 580
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/494 (53%), Positives = 347/494 (70%), Gaps = 19/494 (3%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLA----DLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
L GP HF+ +S+ + L+ D P V G Q ++Y ETYGCQMNV
Sbjct: 50 LATGPTFQHFLRSASVPQEKLLSPEVEDPPPYLTVDELLGR----QRKVYLETYGCQMNV 105
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 106 NDTEIAWSILQKNGYLRTNNLQE-ADVILLITCSIREKAEQTIWNRLHQLKVLK------ 158
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
T R +S+ P +I +LGCMAERLK++IL +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 159 --TKRLRSRVPLRIGILGCMAERLKEEILKREKMVDILAGPDAYRDLPRLLAVAESGQQA 216
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYAD+ PV+ S N+ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++
Sbjct: 217 ANVLLSLDETYADVMPVQTSLNATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILE 276
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV +L ++G+KEVTLLGQNVNS+ D S + + LS GF++ K+K+ GLRFA
Sbjct: 277 EVRKLSEQGLKEVTLLGQNVNSFRDNSEVHFN-SAAVSTNLSRGFSANYKIKQGGLRFAH 335
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VL+ MRRG
Sbjct: 336 LLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLDAMRRG 395
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAY++L+ IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSM
Sbjct: 396 YSREAYVELIHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLQEVQYNMGFLFAYSM 455
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T
Sbjct: 456 RQKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANKTSVGCTQLVLVEGVSKRSA-T 514
Query: 511 ELVGKSDRGHRVAF 524
+L G++D +V F
Sbjct: 515 DLCGRNDGNLKVIF 528
>gi|340722639|ref|XP_003399711.1| PREDICTED: CDK5RAP1-like protein-like [Bombus terrestris]
Length = 602
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/487 (54%), Positives = 338/487 (69%), Gaps = 18/487 (3%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVL 97
GP L F+A S++ S + + + GS+ ++Y E YGCQMNVND E++
Sbjct: 80 GPSLKDFLA-SNIEVSSETISVPNIPYIQNIDGSD----QKVYFEVYGCQMNVNDAEVIW 134
Query: 98 SIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQ 157
SI+K+ GY +V NV E A VI + TC+IRD AE KVW +L L KKN
Sbjct: 135 SILKSHGYRKVNNVIE-ANVILLITCSIRDNAEQKVWNKLTD---LNSTRKKN------- 183
Query: 158 SKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSL 217
P KI +LGCMAERLKDKIL+ K+VDV+ GPD+Y+DLPRLL D + IN +LS
Sbjct: 184 KSFPVKIGLLGCMAERLKDKILEKGKLVDVIAGPDSYKDLPRLLSVPD-NETAINVVLSF 242
Query: 218 EETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWK 277
+ETYAD++PVR+ +S +A+V++MRGC+NMC++CIVPFTRGRERSRP++SIVKE+ L
Sbjct: 243 DETYADVTPVRLDPSSTSAYVTIMRGCDNMCTYCIVPFTRGRERSRPIDSIVKEIQSLSD 302
Query: 278 EGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSL 337
EGVKEV LLGQNVNSY DTS E V L++GF ++ K KK G RFA+LLD +S
Sbjct: 303 EGVKEVILLGQNVNSYRDTSQSEFYVNNNMETHLAKGFKTVYKNKKGGRRFAELLDEVSR 362
Query: 338 EFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYL 397
PEMR R+TSPHPKDFPDE+L ++ +RPN+CK IHLPAQ+GNSAVLERMRRGYTREAY+
Sbjct: 363 INPEMRIRFTSPHPKDFPDEVLQLIAERPNICKQIHLPAQSGNSAVLERMRRGYTREAYI 422
Query: 398 DLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAH 457
DLV IR+ IP++ SSDFI GFCGETEEE DTL+LM+ V Y+ A++F+YSMRE+T AH
Sbjct: 423 DLVHNIRETIPNICFSSDFITGFCGETEEEFQDTLSLMELVKYNKAFLFSYSMREKTTAH 482
Query: 458 RNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSD 517
R Y DDVP +KQ RL +I +R Q+G +QLVLVE +K++ + ++D
Sbjct: 483 RRYKDDVPPSIKQNRLERMISTYRTEVENINKLQIGQLQLVLVEQSSKRS-NENFQARND 541
Query: 518 RGHRVAF 524
RV
Sbjct: 542 GNTRVVI 548
>gi|410291124|gb|JAA24162.1| CDK5 regulatory subunit associated protein 1 [Pan troglodytes]
Length = 587
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/493 (53%), Positives = 345/493 (69%), Gaps = 19/493 (3%)
Query: 35 LPDGPGLHHFIAQSSL---TASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLTMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC++R+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSVREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA L
Sbjct: 286 VKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVPTNLSRGFTTNYKTKQGGLRFAHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR
Sbjct: 404 SREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMR 463
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T+
Sbjct: 464 QKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSKRSA-TD 522
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 523 LCGRNDGNLKVIF 535
>gi|21902527|ref|NP_663773.1| CDK5 regulatory subunit-associated protein 1 [Rattus norvegicus]
gi|32129430|sp|Q9JLH6.1|CK5P1_RAT RecName: Full=CDK5 regulatory subunit-associated protein 1;
AltName: Full=CDK5 activator-binding protein C42
gi|7330738|gb|AAF60223.1|AF177477_1 CDK5 activator-binding protein [Rattus norvegicus]
gi|45219720|gb|AAH66666.1| Cdk5rap1 protein [Rattus norvegicus]
gi|149030944|gb|EDL85971.1| CDK5 regulatory subunit associated protein 1, isoform CRA_a [Rattus
norvegicus]
gi|149030945|gb|EDL85972.1| CDK5 regulatory subunit associated protein 1, isoform CRA_a [Rattus
norvegicus]
Length = 586
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 266/495 (53%), Positives = 350/495 (70%), Gaps = 22/495 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQP----LADLAPASEVSSATGSEVHS-QGRIYQETYGCQMN 89
L GP HF+ +S+ +P + D P +G E+ Q ++Y ETYGCQMN
Sbjct: 55 LATGPTFQHFLRSASVPQEKPSSPEVEDPPPY-----LSGDELLGRQRKVYLETYGCQMN 109
Query: 90 VNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKK 149
VND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK +
Sbjct: 110 VNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKVLKAK--- 165
Query: 150 NVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQK 209
R +S+ P +I +LGCMAERLK +IL+ +KMVD++ GPDAYRDLPRLL V+ GQ+
Sbjct: 166 -----RPRSRVPLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDLPRLLAVVESGQQ 220
Query: 210 GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI+
Sbjct: 221 AANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASIL 280
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
EV +L ++G+KEVTLLGQNVNS+ D S ++ AN LS GF + K K+ GLRF+
Sbjct: 281 DEVRKLSEQGLKEVTLLGQNVNSFRDNSEVQFSSTGSAN--LSRGFTTNYKPKQGGLRFS 338
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
LLD++S PEMR R+TSPHPKDFPDE+L ++R+R N+CK IHLPAQ+G+S VLE MRR
Sbjct: 339 HLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQSGSSRVLEAMRR 398
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GY+REAY+ LV IR+ IP VGLSSDFI GFCGETE++H T++L++ V Y+ ++FAYS
Sbjct: 399 GYSREAYVALVHHIREAIPGVGLSSDFITGFCGETEDDHLQTVSLLREVQYNTGFLFAYS 458
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MR++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++
Sbjct: 459 MRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEASKVNATSVGCTQLVLVEGFSKRS-T 517
Query: 510 TELVGKSDRGHRVAF 524
T+L G++D +V F
Sbjct: 518 TDLCGRNDANLKVIF 532
>gi|390462342|ref|XP_002806791.2| PREDICTED: CDK5 regulatory subunit-associated protein 1 [Callithrix
jacchus]
Length = 531
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/449 (56%), Positives = 332/449 (73%), Gaps = 12/449 (2%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q ++Y ETYGCQMNVND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W
Sbjct: 43 QRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWN 101
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
RL+ LK T R +S+ P +I +LGCMAERLK++IL+ +KMVDV+ GPDAYR
Sbjct: 102 RLHQLKALK--------TRRLRSRVPLRIGILGCMAERLKEEILNREKMVDVLAGPDAYR 153
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLPRLL + GQ+ N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMC++CIVPF
Sbjct: 154 DLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCTYCIVPF 213
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSRPV SI++EV +L ++G+KEVTLLGQNVNS+ D+S E + + LS GF
Sbjct: 214 TRGRERSRPVASILEEVRKLSEQGLKEVTLLGQNVNSFRDSS--EVQFNSAVSTNLSRGF 271
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ CK K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLP
Sbjct: 272 TANCKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLP 331
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ+G+S VLE MRRGY+REAY+ LV IR+ IP V LSSDFI GFCGETEE+H T++L+
Sbjct: 332 AQSGSSRVLEAMRRGYSREAYVALVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLL 391
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG
Sbjct: 392 REVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANQTAVGCT 451
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
QLVLVEG +K++ +L G++D +V F
Sbjct: 452 QLVLVEGLSKRSA-ADLCGRNDGNLKVIF 479
>gi|148235437|ref|NP_001090499.1| CDK5 regulatory subunit associated protein 1 [Xenopus laevis]
gi|116063382|gb|AAI23345.1| MGC154823 protein [Xenopus laevis]
Length = 565
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/447 (57%), Positives = 329/447 (73%), Gaps = 13/447 (2%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+IY ETYGCQMNVND EI SI++ GY ++ A+VIF+ TC++R+ AE +W RL
Sbjct: 82 KIYLETYGCQMNVNDTEIAWSILQQNGYVRT-HIETEADVIFLVTCSVREKAEQTIWNRL 140
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F LKR+ K+ + +I +LGCMAERLK +IL+ + +VD+V GPDAYRDL
Sbjct: 141 QQFATLKRKRSKD---------NRMRIGILGCMAERLKQEILERENLVDIVAGPDAYRDL 191
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
PRLL + GQ+ N LLS++ETYADI PV S +S +AFVS+MRGC+NMC++CIVPFTR
Sbjct: 192 PRLLAVAESGQQVANVLLSVDETYADIMPVHTSASSKSAFVSIMRGCDNMCTYCIVPFTR 251
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSRP+ SI++EV L +GVKEVTLLGQNVNSY D+S ++ + LS GF++
Sbjct: 252 GRERSRPLHSIIEEVRMLSSQGVKEVTLLGQNVNSYCDSSSVQ--FPNVGSPSLSRGFST 309
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ K KK GLRF DLLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IH+PAQ
Sbjct: 310 IYKHKKGGLRFVDLLDKVSQIDPEMRIRFTSPHPKDFPDEVLQLIAERHNICKQIHIPAQ 369
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VLE MRRGY+REAYLDL+Q IR+ IP V LSSDFI GFC ETEE+H TL+L++
Sbjct: 370 SGSNRVLESMRRGYSREAYLDLIQNIRESIPGVSLSSDFITGFCQETEEDHQQTLSLLRE 429
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y+ AY+FAYSMR++T A+ DDVP EVKQRRL ELI FRE G+ VG+ QL
Sbjct: 430 VSYNAAYLFAYSMRKKTRAYHRLQDDVPPEVKQRRLEELISVFREEAGRVNQRTVGSTQL 489
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+K++P EL G++D +V F
Sbjct: 490 VLVEGPSKRSP-AELCGRNDGNTKVIF 515
>gi|42525235|gb|AAS18317.1| CDK5 regulatory subunit associated protein 1 transcript variant 3
[Homo sapiens]
Length = 574
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/493 (53%), Positives = 345/493 (69%), Gaps = 19/493 (3%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA L
Sbjct: 286 VKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR
Sbjct: 404 SREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMR 463
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T+
Sbjct: 464 QKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSKRSA-TD 522
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 523 LCGRNDGNLKVIF 535
>gi|390367810|ref|XP_801957.3| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
isoform 4 [Strongylocentrotus purpuratus]
Length = 656
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 272/527 (51%), Positives = 355/527 (67%), Gaps = 40/527 (7%)
Query: 9 RRLTTRQLKRSFSLNLSRNFSHSSLDLPDGPGLHHFIAQSSLTASQPLADLAPASEVSSA 68
R++T R+L+ S S +GP FIA S Q P +
Sbjct: 94 RQMTKRKLQVSSS---------------NGPTFRDFIANSH---RQNTEVEVPVRDDCIP 135
Query: 69 TGSEVHSQGR---IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAI 125
SE +GR +Y ETYGCQMNV+D EI +I++ +G+ +V ++ +A+VI TCAI
Sbjct: 136 YLSEDIEEGRSRRVYFETYGCQMNVSDTEIAWAILEKSGFQKVEDI-SHADVILAVTCAI 194
Query: 126 RDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMV 185
R+ AE K+W RL YF LK R + + P KI +LGCMAERLK K+L+ K V
Sbjct: 195 RENAEQKIWNRLKYFQSLK--------NNRRKGEVPLKIGLLGCMAERLKKKLLEQSKTV 246
Query: 186 DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCN 245
D+V GPDAYRDLPRLL GQ IN +LS++ETYAD+ PVR+ K+S +AFVS+MRGC+
Sbjct: 247 DIVAGPDAYRDLPRLLNVAGSGQTAINVMLSMDETYADVVPVRLDKDSKSAFVSIMRGCD 306
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
NMCS+CIVPFTRGRERSRP++SIV E+ L +GVKEVT+LGQNVNSY D S E
Sbjct: 307 NMCSYCIVPFTRGRERSRPIDSIVDEIRALSDQGVKEVTVLGQNVNSYRDVS-EESYYSN 365
Query: 306 GAN--------WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDE 357
AN RL+ GF S+ K KK G RFADLL+R++L PEMR R+TSPHPKDFPDE
Sbjct: 366 SANEGSAVSEPTRLARGFKSIYKPKKGGRRFADLLERVALVDPEMRIRFTSPHPKDFPDE 425
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
+LY +RD PN+C +HLPAQ+G++ VL+ MRRGY+REAYL+LV ++ IP V LSSDFI
Sbjct: 426 VLYAIRDFPNICNQLHLPAQSGSTKVLQLMRRGYSREAYLELVDHVQTAIPGVALSSDFI 485
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GFCGETEE+H DT++L++ V Y+ A++FAYSMR++THA+ DDVPEEVKQRRL E+I
Sbjct: 486 AGFCGETEEDHEDTMSLLRLVKYNYAFLFAYSMRQKTHAYHKMQDDVPEEVKQRRLREMI 545
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
R+ + + VG QLVL+EG +K++ + +LVG++D RV
Sbjct: 546 TVCRDGMAEINATHVGAKQLVLLEGTSKRS-EKDLVGRNDANTRVVI 591
>gi|380813662|gb|AFE78705.1| CDK5 regulatory subunit-associated protein 1 isoform a [Macaca
mulatta]
gi|383419105|gb|AFH32766.1| CDK5 regulatory subunit-associated protein 1 isoform a [Macaca
mulatta]
gi|384947622|gb|AFI37416.1| CDK5 regulatory subunit-associated protein 1 isoform a [Macaca
mulatta]
Length = 587
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/493 (53%), Positives = 345/493 (69%), Gaps = 19/493 (3%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLTMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVDV+ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDVLAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ + ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTNPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + + LS GF + K K+ GLRFA L
Sbjct: 286 VKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVSTNLSRGFTTNYKAKQGGLRFAHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR
Sbjct: 404 SREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMR 463
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
++T A+ DDVPEEVK RRL ELI FRE + VG QLVLVEG +K++ T+
Sbjct: 464 QKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANQISVGCTQLVLVEGLSKRSV-TD 522
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 523 LCGRNDGNLKVIF 535
>gi|10436223|dbj|BAB14760.1| unnamed protein product [Homo sapiens]
Length = 587
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/493 (53%), Positives = 344/493 (69%), Gaps = 19/493 (3%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA L
Sbjct: 286 VKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ Y+M ++FAYSMR
Sbjct: 404 SREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREAQYNMGFLFAYSMR 463
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T+
Sbjct: 464 QKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSKRSA-TD 522
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 523 LCGRNDGNLKVIF 535
>gi|281339290|gb|EFB14874.1| hypothetical protein PANDA_006744 [Ailuropoda melanoleuca]
Length = 567
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 266/503 (52%), Positives = 353/503 (70%), Gaps = 26/503 (5%)
Query: 32 SLDLPDGPGLHHFIAQSSLTASQP-LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
S L +GP HF+ +S QP + D P V G Q ++Y ETYGCQMNV
Sbjct: 54 SSKLANGPTFQHFLRSASAPQEQPDVEDPPPYLTVDELLGR----QRKVYLETYGCQMNV 109
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 110 NDTEIAWSILQKSGYLRTRNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------ 162
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 163 --TKRLRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQA 220
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV+SI++
Sbjct: 221 ANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVDSILE 280
Query: 271 EVDELWKE---------GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKV 321
EV +L ++ G+KEVTLLGQNVNS+ D+S E + + LS GF++ K
Sbjct: 281 EVRKLSEQVKSCLGFCLGLKEVTLLGQNVNSFRDSS--EVQFNNAVSTNLSRGFSTNYKP 338
Query: 322 KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNS 381
K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++++R N+CK IHLPAQ+G+S
Sbjct: 339 KQGGLRFAHLLDKVSRIDPEMRIRFTSPHPKDFPDEVLQLIQERDNICKQIHLPAQSGSS 398
Query: 382 AVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYD 441
VLE MRRGY+REAY++L+ IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+
Sbjct: 399 RVLEAMRRGYSREAYVELIHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYN 458
Query: 442 MAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVE 501
M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVE
Sbjct: 459 MGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANMASVGCTQLVLVE 518
Query: 502 GPNKKAPDTELVGKSDRGHRVAF 524
G +K++ T+L G++D +V F
Sbjct: 519 GVSKRSA-TDLCGRNDGNLKVIF 540
>gi|332858143|ref|XP_001155512.2| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 1
[Pan troglodytes]
gi|410214662|gb|JAA04550.1| CDK5 regulatory subunit associated protein 1 [Pan troglodytes]
gi|410249024|gb|JAA12479.1| CDK5 regulatory subunit associated protein 1 [Pan troglodytes]
gi|410337905|gb|JAA37899.1| CDK5 regulatory subunit associated protein 1 [Pan troglodytes]
Length = 587
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/493 (53%), Positives = 345/493 (69%), Gaps = 19/493 (3%)
Query: 35 LPDGPGLHHFIAQSSL---TASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLTMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC++R+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSVREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA L
Sbjct: 286 VKKLSEQGLKEVTLLGQNVNSFWDNS--EVQFNNAVPTNLSRGFTTNYKTKQGGLRFAHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR
Sbjct: 404 SREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMR 463
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T+
Sbjct: 464 QKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSKRSA-TD 522
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 523 LCGRNDGNLKVIF 535
>gi|62857473|ref|NP_001017192.1| CDK5 regulatory subunit associated protein 1 [Xenopus (Silurana)
tropicalis]
Length = 569
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/495 (53%), Positives = 344/495 (69%), Gaps = 24/495 (4%)
Query: 35 LPDGPGLHHFIAQS--SLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVND 92
L GP L F+ + + T S + P + S + S +IY ETYGCQMNVND
Sbjct: 40 LATGPQLKDFLVNNKPAETVSSTDDEDPPPYIIPSYSPSR---NNKIYLETYGCQMNVND 96
Query: 93 MEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVA 152
EI SI++ GY E A+VI + TC++R+ AE +W RL LKR+ K
Sbjct: 97 TEIAWSILQQNGYVRTYTEAE-ADVILLVTCSVREKAEQTIWNRLQQLAALKRKRSK--- 152
Query: 153 TGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 212
T R +I +LGCMAERLK +ILD + +VD+V GPDAYRDLPRLL + GQ+ N
Sbjct: 153 TSRM------RIGLLGCMAERLKQEILDKENLVDLVAGPDAYRDLPRLLSVAETGQQVAN 206
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LLS++ETYADI PV S +S +AFVS+MRGC+NMC++CIVPFTRGRERSRP++SI++EV
Sbjct: 207 VLLSVDETYADIMPVHTSASSKSAFVSIMRGCDNMCTYCIVPFTRGRERSRPLQSILEEV 266
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGME---KEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
L +GVKEVTLLGQNVNSY DTS + E P LS GF+++ K KK GLRF
Sbjct: 267 RMLSSQGVKEVTLLGQNVNSYRDTSSAQFPNAESPP-----LSRGFSTIYKHKKGGLRFV 321
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
DLLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IH+PAQ+G++ VLE MRR
Sbjct: 322 DLLDKVSQIDPEMRIRFTSPHPKDFPDEVLQLIAERHNICKQIHIPAQSGSNKVLETMRR 381
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GY+RE YLDL+Q I++ IP V LSSDFI GFC ETEE+H TL+L++ V Y+ A++FAYS
Sbjct: 382 GYSREVYLDLIQNIQESIPGVSLSSDFITGFCEETEEDHLQTLSLLRTVSYNAAFLFAYS 441
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MR++T A+ DDVP+EVKQRRL ELI FRE G+ VG+ QLVLVEGP+K++P+
Sbjct: 442 MRKKTRAYHRLQDDVPQEVKQRRLAELIAVFREEAGRVNQRAVGSTQLVLVEGPSKRSPE 501
Query: 510 TELVGKSDRGHRVAF 524
EL G++D +V F
Sbjct: 502 -ELCGRNDGNTKVIF 515
>gi|28872784|ref|NP_057166.3| CDK5 regulatory subunit-associated protein 1 isoform b [Homo
sapiens]
gi|119596725|gb|EAW76319.1| CDK5 regulatory subunit associated protein 1, isoform CRA_b [Homo
sapiens]
gi|158257582|dbj|BAF84764.1| unnamed protein product [Homo sapiens]
Length = 497
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/449 (56%), Positives = 331/449 (73%), Gaps = 12/449 (2%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q ++Y ETYGCQMNVND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W
Sbjct: 9 QRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWN 67
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
RL+ LK T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYR
Sbjct: 68 RLHQLKALK--------TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYR 119
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLPRLL + GQ+ N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPF
Sbjct: 120 DLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPF 179
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSRP+ SI++EV +L ++G+KEVTLLGQNVNS+ D S E + LS GF
Sbjct: 180 TRGRERSRPIASILEEVKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGF 237
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLP
Sbjct: 238 TTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLP 297
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ+G+S VLE MRRGY+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L+
Sbjct: 298 AQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLL 357
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG
Sbjct: 358 REVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCT 417
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
QLVLVEG +K++ T+L G++D +V F
Sbjct: 418 QLVLVEGLSKRSA-TDLCGRNDGNLKVIF 445
>gi|195571987|ref|XP_002103982.1| GD20720 [Drosophila simulans]
gi|194199909|gb|EDX13485.1| GD20720 [Drosophila simulans]
Length = 583
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/487 (53%), Positives = 337/487 (69%), Gaps = 14/487 (2%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIV 96
GPG F A + + + + V + + GR ++ E YGCQMN ND E+V
Sbjct: 52 GPGFQDFFAVKPASRLKTDEEEHVDTSVPYLNSIDFNGNGRKVHFEVYGCQMNTNDTEVV 111
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRS 156
SI+K GY PE A+VI + TCA+RD AE ++W RL + +K + RS
Sbjct: 112 FSILKENGYLRC-QEPEEADVIMLVTCAVRDGAEQRIWNRLKHLRAMKNK--------RS 162
Query: 157 QSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGINTLL 215
+HP ++ +LGCMAERLK+K+LD ++ VDV+ GPD+Y+DLPRLL YG IN LL
Sbjct: 163 TRRHPLQLTLLGCMAERLKEKLLDQEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLL 222
Query: 216 SLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDEL 275
SL+ETYAD+ PVR++ S TAFVS+MRGC+NMC++CIVPFTRGRERSRP+ SIV EV L
Sbjct: 223 SLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLASIVAEVKAL 282
Query: 276 WKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL 335
++GVKEVTLLGQNVNSY D S E E EP + GF+++ K K G FA LL +
Sbjct: 283 AEQGVKEVTLLGQNVNSYRDRSAQE-EQEPLKATAVP-GFSTVYKPKTGGTPFAALLRSV 340
Query: 336 SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREA 395
+ PEMR R+TSPHPKDF DE+L ++RD PNVCK +HLPAQ+GN+ VLERMRRGY+REA
Sbjct: 341 AQAVPEMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREA 400
Query: 396 YLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTH 455
YL+LVQ IRQ +PDVGLSSDFICGFCGETEEE DT++L++ V Y++AY+FAYSMRE+T
Sbjct: 401 YLELVQHIRQFLPDVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTT 460
Query: 456 AHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGK 515
AHR + DDVP VK RL +++ FRE Q + G QL+L+EG +K++ D+ G+
Sbjct: 461 AHRRFKDDVPINVKNERLRRMVQIFREGATQLHRKMEGQEQLILIEGKSKRS-DSHWFGR 519
Query: 516 SDRGHRV 522
+D +V
Sbjct: 520 NDANIKV 526
>gi|13385358|ref|NP_080152.1| CDK5 regulatory subunit-associated protein 1 [Mus musculus]
gi|32129439|sp|Q8BTW8.2|CK5P1_MOUSE RecName: Full=CDK5 regulatory subunit-associated protein 1;
AltName: Full=CDK5 activator-binding protein C42
gi|12845305|dbj|BAB26700.1| unnamed protein product [Mus musculus]
gi|19264024|gb|AAH25132.1| CDK5 regulatory subunit associated protein 1 [Mus musculus]
gi|148674120|gb|EDL06067.1| CDK5 regulatory subunit associated protein 1 [Mus musculus]
Length = 588
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/495 (53%), Positives = 349/495 (70%), Gaps = 22/495 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQP----LADLAPASEVSSATGSEVHS-QGRIYQETYGCQMN 89
L GP HF+ +S+ +P + D P +G E+ Q ++Y ETYGCQMN
Sbjct: 57 LATGPTFQHFLRSASVPQEKPSSPEVEDPPPY-----LSGDELLGRQRKVYLETYGCQMN 111
Query: 90 VNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKK 149
VND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 112 VNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKVLK----- 165
Query: 150 NVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQK 209
T R +S+ P +I +LGCMAERLK +IL+ +KMVD++ GPDAYRDLPRLL V+ GQ+
Sbjct: 166 ---TKRPRSRVPLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDLPRLLAVVESGQQ 222
Query: 210 GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI+
Sbjct: 223 AANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASIL 282
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
EV +L ++G+KEVTLLGQNVNS+ D S ++ AN LS GF + K K+ GLRF+
Sbjct: 283 DEVRKLSEQGLKEVTLLGQNVNSFRDNSEVQFNNAGSAN--LSRGFTTNYKPKQGGLRFS 340
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
LLD++S PEMR R+TSPHPKDFPDE+L ++R+R N+CK IHLPAQ+G+S VL+ MRR
Sbjct: 341 HLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQSGSSRVLDAMRR 400
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GY+REAY+ LV +R+ IP V LSSDFI GFCGETE++H T++L++ V Y+ ++FAYS
Sbjct: 401 GYSREAYVALVHHVRETIPGVSLSSDFITGFCGETEDDHRQTVSLLREVQYNTGFLFAYS 460
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MR++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++
Sbjct: 461 MRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEASKANKTSVGCSQLVLVEGFSKRS-T 519
Query: 510 TELVGKSDRGHRVAF 524
T+L G++D +V F
Sbjct: 520 TDLCGRNDANLKVIF 534
>gi|26353536|dbj|BAC40398.1| unnamed protein product [Mus musculus]
Length = 588
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/495 (53%), Positives = 349/495 (70%), Gaps = 22/495 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQP----LADLAPASEVSSATGSEVHS-QGRIYQETYGCQMN 89
L GP HF+ +S+ +P + D P +G E+ Q ++Y ETYGCQMN
Sbjct: 57 LATGPTFQHFLRSASVPQEKPSSPEVEDPPPY-----LSGDELLGRQRKVYLETYGCQMN 111
Query: 90 VNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKK 149
VND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 112 VNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKVLK----- 165
Query: 150 NVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQK 209
T R +S+ P +I +LGCMAERLK +IL+ +KMVD++ GPDAYRDLPRLL V+ GQ+
Sbjct: 166 ---TKRPRSRVPLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDLPRLLAVVESGQQ 222
Query: 210 GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI+
Sbjct: 223 AANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASIL 282
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
EV +L ++G+KEVTLLGQNVNS+ D S ++ AN LS GF + K K+ GLRF+
Sbjct: 283 DEVRKLSEQGLKEVTLLGQNVNSFRDNSEVQFNNAGSAN--LSRGFTTNYKPKQGGLRFS 340
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
LLD++S PEMR R+TSPHPKDFPDE+L ++R+R N+CK IHLPAQ+G+S VL+ MRR
Sbjct: 341 HLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQSGSSRVLDAMRR 400
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GY+REAY+ LV +R+ IP V LSSDFI GFCGETE++H T++L++ V Y+ ++FAYS
Sbjct: 401 GYSREAYVALVHHVRETIPGVSLSSDFITGFCGETEDDHRQTVSLLREVQYNTGFLFAYS 460
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MR++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++
Sbjct: 461 MRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEASKANKTSVGYSQLVLVEGFSKRS-T 519
Query: 510 TELVGKSDRGHRVAF 524
T+L G++D +V F
Sbjct: 520 TDLCGRNDANLKVIF 534
>gi|348564026|ref|XP_003467807.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like [Cavia
porcellus]
Length = 587
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/493 (53%), Positives = 346/493 (70%), Gaps = 18/493 (3%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR---IYQETYGCQMNVN 91
L GP HF+ +S +P + P +E +E GR +Y ETYGCQMNVN
Sbjct: 58 LATGPTFQHFLRSASAPQEKPSS---PEAEDPPPYLTEEELLGRQRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY NV E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTNNVQE-ADVILLVTCSIREKAEQTIWNRLHQLKTLK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +K+VD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TKRLRSRTPLRIGILGCMAERLKEEILNREKLVDLLAGPDAYRDLPRLLAIAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGCNNMCS+CIVPFTRGRERSRPV SI++E
Sbjct: 226 NVLLSLDETYADVLPVQTSPSATSAFVSIMRGCNNMCSYCIVPFTRGRERSRPVASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L +G+KEVTLLGQNVNS+ D S E + + +LS GF + K K+ GLRF+ L
Sbjct: 286 VRKLSDQGLKEVTLLGQNVNSFRDNS--EVQFNNAVSTKLSRGFTTNYKTKQGGLRFSHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+ ++FAYSMR
Sbjct: 404 SREAYVELVHHIRESIPGVCLSSDFIAGFCGETEEDHLQTVSLLREVQYNTGFLFAYSMR 463
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
E+T A+ DDVPEEVK RRL ELI FRE + + V QLVLVEG +K++ T+
Sbjct: 464 EKTRAYHRLKDDVPEEVKLRRLEELITVFREEALKANKTSVDCTQLVLVEGLSKRSV-TD 522
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 523 LCGRNDGNLKVIF 535
>gi|397487349|ref|XP_003814763.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 3
[Pan paniscus]
gi|397487351|ref|XP_003814764.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 4
[Pan paniscus]
Length = 496
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/449 (56%), Positives = 331/449 (73%), Gaps = 12/449 (2%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q ++Y ETYGCQMNVND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W
Sbjct: 8 QRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWN 66
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
RL+ LK T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYR
Sbjct: 67 RLHQLKALK--------TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYR 118
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLPRLL + GQ+ N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPF
Sbjct: 119 DLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPF 178
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSRP+ SI++EV +L ++G+KEVTLLGQNVNS+ D S E + LS GF
Sbjct: 179 TRGRERSRPIASILEEVKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVPTNLSRGF 236
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLP
Sbjct: 237 TTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLP 296
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ+G+S VLE MRRGY+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L+
Sbjct: 297 AQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLL 356
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG
Sbjct: 357 REVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCT 416
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
QLVLVEG +K++ T+L G++D +V F
Sbjct: 417 QLVLVEGLSKRSA-TDLCGRNDGNLKVIF 444
>gi|440905124|gb|ELR55550.1| CDK5 regulatory subunit-associated protein 1 [Bos grunniens mutus]
Length = 598
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/503 (52%), Positives = 350/503 (69%), Gaps = 29/503 (5%)
Query: 35 LPDGPGLHHFIAQSSLTASQP----LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
L GP F+ +S+ QP + D P V G Q R+Y ETYGCQMNV
Sbjct: 60 LATGPTFQDFLRSASVPPEQPSSSEVEDPPPYLTVDELLGR----QRRVYLETYGCQMNV 115
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ K+
Sbjct: 116 NDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQL--------KS 166
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
+ + R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 LKSKRLRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQA 226
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++
Sbjct: 227 ANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILE 286
Query: 271 EVDELWKE---------GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKV 321
EV +L ++ G+KEVTLLGQNVNS+ D S E + + LS GF++ K
Sbjct: 287 EVRKLSEQVRNLPALLAGLKEVTLLGQNVNSFRDNS--EVQFNNAVSTNLSRGFSTNYKA 344
Query: 322 KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNS 381
K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++R+R N+CK IHLPAQ+G+S
Sbjct: 345 KQGGLRFAHLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERDNICKQIHLPAQSGSS 404
Query: 382 AVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYD 441
VLE MRRGY+REAY++L+ IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+
Sbjct: 405 RVLEAMRRGYSREAYVELIHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYN 464
Query: 442 MAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVE 501
+ ++FAYSMR++T A+ DD+PEEVK RRL ELI FRE + S VG QLVLVE
Sbjct: 465 IGFLFAYSMRQKTRAYHRLKDDIPEEVKLRRLEELITVFREEATKANKSFVGCTQLVLVE 524
Query: 502 GPNKKAPDTELVGKSDRGHRVAF 524
GP+K++ +L G++D +V F
Sbjct: 525 GPSKRSA-ADLCGRNDGNLKVIF 546
>gi|115313109|gb|AAI24421.1| Zgc:162738 protein [Danio rerio]
Length = 555
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/499 (52%), Positives = 344/499 (68%), Gaps = 23/499 (4%)
Query: 38 GPGLHHFIA-QSSLTASQPLADLAPASEVSSATGSEVHSQG-----------RIYQETYG 85
G GL + +S LT D +S+ S GSE + + ++Y ETYG
Sbjct: 17 GTGLSRIMQLKSKLTNGPSFQDFIMSSDKSDFDGSEEYEEHYIPKNMSDHSRKVYFETYG 76
Query: 86 CQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKR 145
CQMN ND EI SI++ AGYS + + + A+V+ + TC+IR+ AE +W RL + K+
Sbjct: 77 CQMNTNDTEIAWSILQKAGYSRTLEL-QKADVVLLVTCSIREKAEQTIWNRLKHLTASKK 135
Query: 146 EWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVD 205
+K+ K I VLGCMAERLK ++LD +K+VDV+ GPDAYRDLPRLL
Sbjct: 136 RIQKH--------KRSLTIGVLGCMAERLKSELLDQEKLVDVLAGPDAYRDLPRLLSLAH 187
Query: 206 YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPV 265
GQ+ N LLSLEETYAD+ PV + +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+
Sbjct: 188 GGQRASNVLLSLEETYADVIPVHQTLEGHSAFVSIMRGCDNMCSYCIVPFTRGRERSRPM 247
Query: 266 ESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMG 325
SIV+EV L +GVKE+TLLGQNVNSY D S ++ N +LS GF S+ + K+ G
Sbjct: 248 SSIVEEVRMLSDQGVKEITLLGQNVNSYRDLSKLQFSCSE-RNTQLSRGFQSVYRTKQGG 306
Query: 326 LRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLE 385
LRFADLLDR+SL P MR R+TSPHPKDFPDE+L ++++R N+CK++HLPAQ+G+S +L
Sbjct: 307 LRFADLLDRVSLINPNMRIRFTSPHPKDFPDEVLQLIQERSNICKHLHLPAQSGSSRILH 366
Query: 386 RMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYM 445
MRRGYTREAYL+LV+ IR+IIP V LSSDFI GFC ETEE+H T++L+K VGY++ +
Sbjct: 367 AMRRGYTREAYLELVENIRKIIPGVSLSSDFIAGFCSETEEDHQQTISLLKEVGYNIGFF 426
Query: 446 FAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNK 505
F YSMR++THA+ D+VP VK+RRL ELI FRE + + +G +QLVLVEG +K
Sbjct: 427 FTYSMRKKTHAYHRLEDNVPAPVKKRRLEELISVFREKATKVNMTLIGNIQLVLVEGKSK 486
Query: 506 KAPDTELVGKSDRGHRVAF 524
++ + EL G++D +V F
Sbjct: 487 RSSE-ELCGRNDGNVKVIF 504
>gi|194379922|dbj|BAG58313.1| unnamed protein product [Homo sapiens]
Length = 534
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/449 (56%), Positives = 330/449 (73%), Gaps = 12/449 (2%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q ++Y ETYGCQMNVND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W
Sbjct: 46 QRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWN 104
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
RL+ LK T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYR
Sbjct: 105 RLHQLKALK--------TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYR 156
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLPRLL + GQ+ N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPF
Sbjct: 157 DLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPF 216
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSRP+ SI++EV +L ++G+KEVTLLGQNVNS+ D S E + LS GF
Sbjct: 217 TRGRERSRPIASILEEVKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGF 274
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLP
Sbjct: 275 TTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLP 334
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ+G+S VLE MRRGY+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L+
Sbjct: 335 AQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLL 394
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG
Sbjct: 395 REVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCT 454
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
QLVLVEG +K++ T L G++D +V F
Sbjct: 455 QLVLVEGLSKRSA-TALCGRNDGNLKVIF 482
>gi|355677388|gb|AER95981.1| CDK5 regulatory subunit associated protein 1 [Mustela putorius
furo]
Length = 485
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/446 (56%), Positives = 333/446 (74%), Gaps = 12/446 (2%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y ETYGCQMNVND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+
Sbjct: 1 VYLETYGCQMNVNDTEIAWSILQKSGYLRTRNLQE-ADVILLVTCSIREKAEQTIWNRLH 59
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
LK T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLP
Sbjct: 60 QLKALK--------TKRLRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLP 111
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
RLL D GQ+ N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRG
Sbjct: 112 RLLAVADSGQQAANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRG 171
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERSRPV SI++EV +L ++G+KEVTLLGQNVNS+ D+S E + + LS GF++
Sbjct: 172 RERSRPVASILEEVRKLSEQGLKEVTLLGQNVNSFRDSS--EVQFNNAVSTNLSRGFSTN 229
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+
Sbjct: 230 YKPKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQS 289
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G+S VLE MRRGY+REAY++L++ IR+ IP V LSSDFI GFCGETEE+H T++L++ V
Sbjct: 290 GSSRVLEAMRRGYSREAYMELIRHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREV 349
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG QLV
Sbjct: 350 QYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANMTSVGCTQLV 409
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +K++ ++L G++D +V F
Sbjct: 410 LVEGHSKRSA-SDLCGRNDGNLKVIF 434
>gi|344279865|ref|XP_003411706.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 [Loxodonta
africana]
Length = 588
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/494 (52%), Positives = 348/494 (70%), Gaps = 20/494 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLA----DLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
L GP F+ +S +P + D P V G Q ++Y ETYGCQMNV
Sbjct: 59 LATGPTFQDFLRSASGPQEEPSSPEAEDPPPYLTVDELLGR----QRKVYLETYGCQMNV 114
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ +GY N+ E A+V+ + TC+IR+ AE +W RL LK
Sbjct: 115 NDTEIAWSILQKSGYLRTSNLRE-ADVVLLVTCSIREKAEQTIWNRLRQLKVLK------ 167
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
T R S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 168 --TKRPLSRVPLRIGILGCMAERLKEEILNREKMVDLLAGPDAYRDLPRLLAIAESGQQA 225
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYAD+ PV+ S+++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++
Sbjct: 226 ANVLLSLDETYADVMPVQTSRSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILE 285
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV +L ++G+KEVTLLGQNVNS+ D+S E + + LS GF + K+K+ GLRFA
Sbjct: 286 EVRKLSEQGLKEVTLLGQNVNSFRDSS--EVQFNNAVSTNLSRGFTTNYKMKQGGLRFAY 343
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRG
Sbjct: 344 LLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIDERHNICKQIHLPAQSGSSRVLEAMRRG 403
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAY++L+ IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSM
Sbjct: 404 YSREAYVELIHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYNMGFLFAYSM 463
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R++T A+ DDVP EVK+RRL ELI FRE + + VG+ QLVLVEG +K++ T
Sbjct: 464 RQKTRAYHRLQDDVPGEVKKRRLKELISVFREEATKANKNSVGSSQLVLVEGLSKRSA-T 522
Query: 511 ELVGKSDRGHRVAF 524
+L G++D +V F
Sbjct: 523 DLCGRNDGNLKVIF 536
>gi|195499798|ref|XP_002097099.1| GE24685 [Drosophila yakuba]
gi|194183200|gb|EDW96811.1| GE24685 [Drosophila yakuba]
Length = 583
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 255/487 (52%), Positives = 337/487 (69%), Gaps = 14/487 (2%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIV 96
GPG F A + + + + V + + GR ++ E YGCQMN ND E+V
Sbjct: 52 GPGFQDFFAVKPASRLKTDEEEPVDTSVPYLNSIDFNGNGRKVHFEVYGCQMNTNDTEVV 111
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRS 156
SI++ GY PE A+VI + TCA+RD AE ++W RL + +K + RS
Sbjct: 112 FSILQENGYLRC-QEPEEADVIMLVTCAVRDGAEQRIWNRLKHLRAMK--------SKRS 162
Query: 157 QSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGINTLL 215
+HP ++ +LGCMAERLK+K+L+ ++ VDV+ GPD+Y+DLPRLL YG IN LL
Sbjct: 163 TRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLL 222
Query: 216 SLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDEL 275
SL+ETYAD+ PVR++ S TAFVS+MRGC+NMC++CIVPFTRGRERSRP+ESIV EV L
Sbjct: 223 SLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLESIVAEVKAL 282
Query: 276 WKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL 335
++GVKEVTLLGQNVNSY D SG+E + A GF+++ K K G FA LL +
Sbjct: 283 AEQGVKEVTLLGQNVNSYRDRSGLEAQESLKATP--VPGFSTVYKPKTGGTPFAALLRSV 340
Query: 336 SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREA 395
+ PEMR R+TSPHPKDF DE+L ++RD PNVCK +HLPAQ+GN+ VLERMRRGY+REA
Sbjct: 341 AQAVPEMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREA 400
Query: 396 YLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTH 455
YL+LV+ IRQ +P+VGLSSDFICGFCGETE E DT++L++ V Y++AY+FAYSMRE+T
Sbjct: 401 YLELVEHIRQFLPNVGLSSDFICGFCGETEAEFQDTVSLIQQVKYNVAYLFAYSMREKTT 460
Query: 456 AHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGK 515
AHR Y D+VP VK +RL +++ FRE Q + G QL+LVEG +K++ D G+
Sbjct: 461 AHRRYKDNVPLNVKNKRLQRMVQVFREGATQLHRKMEGQEQLILVEGKSKRS-DAHWFGR 519
Query: 516 SDRGHRV 522
+D +V
Sbjct: 520 NDANIKV 526
>gi|62897049|dbj|BAD96465.1| CDK5 regulatory subunit associated protein 1 isoform a variant
[Homo sapiens]
Length = 586
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/493 (53%), Positives = 344/493 (69%), Gaps = 20/493 (4%)
Query: 35 LPDGPGLHHFIAQSSL---TASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA L
Sbjct: 286 VKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR
Sbjct: 404 SREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMR 463
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
+ T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T+
Sbjct: 464 Q-TRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSKRSA-TD 521
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 522 LCGRNDGNLKVIF 534
>gi|89272073|emb|CAJ81315.1| CDK5 regulatory subunit associated protein 1 [Xenopus (Silurana)
tropicalis]
Length = 625
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/495 (53%), Positives = 344/495 (69%), Gaps = 24/495 (4%)
Query: 35 LPDGPGLHHFIAQS--SLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVND 92
L GP L F+ + + T S + P + S + S +IY ETYGCQMNVND
Sbjct: 96 LATGPQLKDFLVNNKPAETVSSTDDEDPPPYIIPSYSPSR---NNKIYLETYGCQMNVND 152
Query: 93 MEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVA 152
EI SI++ GY E A+VI + TC++R+ AE +W RL LKR+ K
Sbjct: 153 TEIAWSILQQNGYVRTYTEAE-ADVILLVTCSVREKAEQTIWNRLQQLAALKRKRSK--- 208
Query: 153 TGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 212
T R +I +LGCMAERLK +ILD + +VD+V GPDAYRDLPRLL + GQ+ N
Sbjct: 209 TSRM------RIGLLGCMAERLKQEILDKENLVDLVAGPDAYRDLPRLLSVAETGQQVAN 262
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LLS++ETYADI PV S +S +AFVS+MRGC+NMC++CIVPFTRGRERSRP++SI++EV
Sbjct: 263 VLLSVDETYADIMPVHTSASSKSAFVSIMRGCDNMCTYCIVPFTRGRERSRPLQSILEEV 322
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGME---KEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
L +GVKEVTLLGQNVNSY DTS + E P LS GF+++ K KK GLRF
Sbjct: 323 RMLSSQGVKEVTLLGQNVNSYRDTSSAQFPNAESPP-----LSRGFSTIYKHKKGGLRFV 377
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
DLLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IH+PAQ+G++ VLE MRR
Sbjct: 378 DLLDKVSQIDPEMRIRFTSPHPKDFPDEVLQLIAERHNICKQIHIPAQSGSNKVLETMRR 437
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GY+RE YLDL+Q I++ IP V LSSDFI GFC ETEE+H TL+L++ V Y+ A++FAYS
Sbjct: 438 GYSREVYLDLIQNIQESIPGVSLSSDFITGFCEETEEDHLQTLSLLRTVSYNAAFLFAYS 497
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MR++T A+ DDVP+EVKQRRL ELI FRE G+ VG+ QLVLVEGP+K++P+
Sbjct: 498 MRKKTRAYHRLQDDVPQEVKQRRLAELIAVFREEAGRVNQRAVGSTQLVLVEGPSKRSPE 557
Query: 510 TELVGKSDRGHRVAF 524
EL G++D +V F
Sbjct: 558 -ELCGRNDGNTKVIF 571
>gi|91088221|ref|XP_973511.1| PREDICTED: similar to CG6345 CG6345-PA [Tribolium castaneum]
gi|270011824|gb|EFA08272.1| hypothetical protein TcasGA2_TC005903 [Tribolium castaneum]
Length = 610
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/492 (52%), Positives = 354/492 (71%), Gaps = 17/492 (3%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLAD--LAPASEVSSATGSEVHSQGRIYQETYGCQMNVND 92
L +GP L F +L + L + + P + + G + ++Y + YGCQMNVND
Sbjct: 71 LLNGPNLKDFFRDENLKNQENLQEEHVVPYLQDINRYGQ----KRKVYFDVYGCQMNVND 126
Query: 93 MEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVA 152
EI+ SI++ Y + N+ E A+V+ I TCAIR+ AE K+W RL Y R K+ A
Sbjct: 127 TEIIWSILQKHNYLKTSNLLE-ADVVLIVTCAIREGAESKIWGRLEYL----RGINKSKA 181
Query: 153 TGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 212
T S+ K + VLGCMAERLK K+L+ +K VD+V GPDAYRDLPRLL + QK +N
Sbjct: 182 TFSSRFK----VGVLGCMAERLKHKVLEKNKTVDLVAGPDAYRDLPRLLALTENDQKSVN 237
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LLS +ETYADI PVR+++NSV+AFVS+MRGC+NMC++CIVPFTRG+ERSRPV+SI++E+
Sbjct: 238 VLLSFDETYADIMPVRLNENSVSAFVSIMRGCDNMCTYCIVPFTRGKERSRPVDSILREI 297
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLL 332
+ L ++GVKEVTLLGQNVNSY D S ++ L++GF ++ K K G RFA LL
Sbjct: 298 ELLSQQGVKEVTLLGQNVNSYRDLSN-SGDIFINNQTNLAKGFKTVYKSKIGGRRFAHLL 356
Query: 333 DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYT 392
++++ PEMR R+TSPHPKDFPDE+L++++ RPN+CK +H+PAQ+GN+ VLERMRRGYT
Sbjct: 357 EKVADVNPEMRIRFTSPHPKDFPDEVLHVIKSRPNICKNLHMPAQSGNTNVLERMRRGYT 416
Query: 393 REAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRE 452
REAY++LV IR ++P+V LSSDFICGFCGETEEE DT++LM+ V Y+ AY+F YSMRE
Sbjct: 417 REAYIELVDHIRYLLPEVSLSSDFICGFCGETEEEFEDTISLMEMVQYNNAYLFPYSMRE 476
Query: 453 RTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+T AHR Y DDVP EVKQ+RL +I+ FR + +Q+G +QL+L+EG ++++ + +L
Sbjct: 477 KTAAHRRYTDDVPAEVKQKRLERMIQTFRFYAEKLNRAQIGRLQLILIEGFSRRSRN-QL 535
Query: 513 VGKSDRGHRVAF 524
G++D+ +V
Sbjct: 536 AGRNDQNIKVVI 547
>gi|160333602|ref|NP_001103849.1| CDK5 regulatory subunit-associated protein 1 [Danio rerio]
gi|159155698|gb|AAI54732.1| Zgc:162738 protein [Danio rerio]
Length = 577
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/499 (52%), Positives = 342/499 (68%), Gaps = 23/499 (4%)
Query: 38 GPGLHHFIA-QSSLTASQPLADLAPASEVSSATGSEVHSQG-----------RIYQETYG 85
G GL + +S LT D +S+ S GSE + + ++Y ETYG
Sbjct: 39 GTGLSRIMQLKSKLTNGPSFQDFIMSSDKSDFDGSEEYEEHYIPKNMSDHSRKVYFETYG 98
Query: 86 CQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKR 145
CQMN ND EI SI++ AGYS + + + A+V+ + TC+IR+ AE +W RL + K+
Sbjct: 99 CQMNTNDTEIAWSILQKAGYSRTLEL-QKADVVLLVTCSIREKAEQTIWNRLKHLTASKK 157
Query: 146 EWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVD 205
+K+ K I VLGCMAERLK ++LD +K+VDV+ GPDAYRDLPRLL
Sbjct: 158 RIQKH--------KRSLTIGVLGCMAERLKSELLDQEKLVDVLAGPDAYRDLPRLLSLAH 209
Query: 206 YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPV 265
GQ+ N LLSLEETYAD+ PV + +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+
Sbjct: 210 GGQRASNVLLSLEETYADVIPVHQTLEGHSAFVSIMRGCDNMCSYCIVPFTRGRERSRPM 269
Query: 266 ESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMG 325
SIV+EV L +GVKE+TLLGQNVNSY D S M+ N +LS GF S+ + K+ G
Sbjct: 270 SSIVEEVRMLSDQGVKEITLLGQNVNSYRDLSKMQFSCSE-RNTQLSRGFQSVYRTKQGG 328
Query: 326 LRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLE 385
LRFADLLDR+SL P MR R+TSPHPKDFPDE+L ++++R N+CK++HLP Q+G+S +L
Sbjct: 329 LRFADLLDRVSLINPNMRIRFTSPHPKDFPDEVLQLIQERSNICKHLHLPVQSGSSRILH 388
Query: 386 RMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYM 445
MRRGYTREAYL+LV+ IR+IIP V LSSDFI GFC ETEE+H T++L+K VGY++ +
Sbjct: 389 AMRRGYTREAYLELVENIRKIIPGVSLSSDFIAGFCSETEEDHQQTISLLKEVGYNIGFF 448
Query: 446 FAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNK 505
F YSMR++THA+ D+VP VK+RRL ELI FRE + + +G QLVLVEG +K
Sbjct: 449 FTYSMRKKTHAYHRLEDNVPAPVKKRRLEELISVFREKATKVNMTLIGNTQLVLVEGKSK 508
Query: 506 KAPDTELVGKSDRGHRVAF 524
++ + EL G++D +V F
Sbjct: 509 RSSE-ELCGRNDGNVKVIF 526
>gi|417403099|gb|JAA48373.1| Putative cdk5 activator-binding protein [Desmodus rotundus]
Length = 592
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/494 (52%), Positives = 346/494 (70%), Gaps = 20/494 (4%)
Query: 35 LPDGPGLHHFIAQSSL----TASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
L GP HF+ +S+ +S + D P V G ++Y ETYGCQMNV
Sbjct: 60 LAAGPTFQHFLRSASVPPEKLSSPDVVDPPPYLTVDELLGR----HRKVYLETYGCQMNV 115
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ K
Sbjct: 116 NDTEIAWSILQKSGYLRTDNLQE-ADVILLVTCSIREKAEQTIWNRLHQL--------KT 166
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
+ T R +S+ P K+ +LGCMAERLK++IL +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 LKTKRLRSRVPLKVGILGCMAERLKEEILHREKMVDILAGPDAYRDLPRLLAVAESGQQA 226
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++
Sbjct: 227 ANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILE 286
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV +L ++G+KEVTLLGQNVNS+ D S E + + LS GF++ K K+ GLRF+
Sbjct: 287 EVRKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVSTNLSRGFSTNYKTKQGGLRFSH 344
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRG
Sbjct: 345 LLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRG 404
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAY++L+ IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSM
Sbjct: 405 YSREAYVELIHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYNMGFLFAYSM 464
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R++T A+ DDV EEVK RRL ELI FRE + + VG QLVLVEG +K++ T
Sbjct: 465 RQKTRAYHRLKDDVVEEVKLRRLQELITVFREEATKANKTSVGCTQLVLVEGLSKRSA-T 523
Query: 511 ELVGKSDRGHRVAF 524
+L G++D +V F
Sbjct: 524 DLCGRNDGNLKVIF 537
>gi|328787511|ref|XP_393868.4| PREDICTED: CDK5RAP1-like protein-like [Apis mellifera]
Length = 596
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/485 (53%), Positives = 343/485 (70%), Gaps = 21/485 (4%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVL 97
GP L F++++ + P + + GS+ ++Y E YGCQMNVND E++
Sbjct: 77 GPSLKDFLSKTEIPIDPIRVPNIPY--IQNINGSD----QKVYFEVYGCQMNVNDTEVIW 130
Query: 98 SIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQ 157
SI+K+ GY +V ++ E ++FI TC+IRD AE K+W RL L+++ KKN
Sbjct: 131 SILKSHGYKKVEDIKEANIILFI-TCSIRDNAEQKIWNRLTDLNHLRKKKKKN------- 182
Query: 158 SKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSL 217
P KI +LGCMAERLKDKIL+ K+VDV+ GPD+Y+DLPRLL D + IN +LS
Sbjct: 183 ---PIKIGLLGCMAERLKDKILERGKLVDVIAGPDSYKDLPRLLSIPD-NETAINVVLSF 238
Query: 218 EETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWK 277
+ETYADI+PVR++ NS +AFV++MRGC+NMC++CIVPFTRGRERSRP+ESIVKE+ L
Sbjct: 239 DETYADITPVRLNPNSTSAFVTIMRGCDNMCTYCIVPFTRGRERSRPIESIVKEIQSLSD 298
Query: 278 EGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSL 337
+GVKE+ LLGQNVNSY D S ++ + L++GF ++ K KK G RF DLLD +S
Sbjct: 299 DGVKEIVLLGQNVNSYRDMSQLK--LYTNMETHLAKGFKTVYKNKKGGRRFCDLLDEVSR 356
Query: 338 EFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYL 397
PEMR R+TSPHPKDFPDE+L ++ +RPN+CK IHLPAQ+GNS +LE+MRRGYTREAY+
Sbjct: 357 INPEMRIRFTSPHPKDFPDEVLQLIAERPNICKEIHLPAQSGNSRILEKMRRGYTREAYI 416
Query: 398 DLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAH 457
DLV IRQIIP++ LSSDFI GFCGETEEE DTL+L++ + Y+ A++F+YSMRE+T AH
Sbjct: 417 DLVHHIRQIIPNIYLSSDFITGFCGETEEEFQDTLSLIELIKYNKAFLFSYSMREKTTAH 476
Query: 458 RNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSD 517
R Y DDVP VKQ RL +I +R + Q+G QLVLVE P+K++ D+ K+D
Sbjct: 477 RRYQDDVPPNVKQNRLERMISKYRTEAEKLNKLQIGQSQLVLVEKPSKRSHDS-FQTKND 535
Query: 518 RGHRV 522
RV
Sbjct: 536 GNTRV 540
>gi|195330093|ref|XP_002031743.1| GM26169 [Drosophila sechellia]
gi|194120686|gb|EDW42729.1| GM26169 [Drosophila sechellia]
Length = 583
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/487 (52%), Positives = 335/487 (68%), Gaps = 14/487 (2%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIV 96
GPG F A + + + + V + + GR ++ E YGCQMN ND E+V
Sbjct: 52 GPGFQDFFAVKPASRLKNDEEEHVDTSVPYLNSIDFNGNGRKVHFEVYGCQMNTNDTEVV 111
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRS 156
SI+K GY PE A+VI + TCA+RD AE ++W RL + +K + RS
Sbjct: 112 FSILKENGYMRC-QEPEEADVIMLVTCAVRDGAEQRIWNRLKHLRAMKNK--------RS 162
Query: 157 QSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGINTLL 215
+HP ++ +LGCMAERLK+K+L+ ++ VDV+ GPD+Y+DLPRLL YG IN LL
Sbjct: 163 TRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLL 222
Query: 216 SLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDEL 275
SL+ETYAD+ PVR++ S TAFVS+MRGC+NMC++CIVPFTRGRERSRP+ SIV EV L
Sbjct: 223 SLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLASIVAEVKAL 282
Query: 276 WKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL 335
++GVKEVTLLGQNVNSY D S E++ A GF+++ K K G FA LL +
Sbjct: 283 AEQGVKEVTLLGQNVNSYRDRSAQEEQESLKATP--VPGFSTVYKPKAGGTPFAALLRSV 340
Query: 336 SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREA 395
+ PEMR R+TSPHPKDF DE+L ++RD PNVCK +HLPAQ+GN+ VLERMRRGY+REA
Sbjct: 341 AQAVPEMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREA 400
Query: 396 YLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTH 455
YL+LVQ IRQ +PDVGLSSDFICGFCGETEEE DT +L++ V Y++AY+FAYSMRE+T
Sbjct: 401 YLELVQHIRQFLPDVGLSSDFICGFCGETEEEFQDTESLIQQVQYNVAYLFAYSMREKTT 460
Query: 456 AHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGK 515
AHR Y DDVP VK RL +++ FR+ Q + G QL+L+EG +K++ D+ G+
Sbjct: 461 AHRRYKDDVPINVKNERLKRMVQVFRDGAKQLHRKMEGKEQLILIEGKSKRS-DSHWFGR 519
Query: 516 SDRGHRV 522
+D +V
Sbjct: 520 NDANIKV 526
>gi|410055012|ref|XP_003953754.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 3
[Pan troglodytes]
gi|410055014|ref|XP_003953755.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 4
[Pan troglodytes]
Length = 496
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/449 (56%), Positives = 331/449 (73%), Gaps = 12/449 (2%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q ++Y ETYGCQMNVND EI SI++ +GY N+ E A+VI + TC++R+ AE +W
Sbjct: 8 QRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSVREKAEQTIWN 66
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
RL+ LK T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYR
Sbjct: 67 RLHQLKALK--------TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYR 118
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLPRLL + GQ+ N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPF
Sbjct: 119 DLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPF 178
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSRP+ SI++EV +L ++G+KEVTLLGQNVNS+ D S E + LS GF
Sbjct: 179 TRGRERSRPIASILEEVKKLSEQGLKEVTLLGQNVNSFWDNS--EVQFNNAVPTNLSRGF 236
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLP
Sbjct: 237 TTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLP 296
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ+G+S VLE MRRGY+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L+
Sbjct: 297 AQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLL 356
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG
Sbjct: 357 REVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCT 416
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
QLVLVEG +K++ T+L G++D +V F
Sbjct: 417 QLVLVEGLSKRSA-TDLCGRNDGNLKVIF 444
>gi|350424183|ref|XP_003493714.1| PREDICTED: CDK5RAP1-like protein-like [Bombus impatiens]
Length = 602
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 264/495 (53%), Positives = 343/495 (69%), Gaps = 27/495 (5%)
Query: 41 LHHFIAQSSLTASQP-LAD-LAPASEVSSATGSEVH---------SQGRIYQETYGCQMN 89
L HF L+ + P L D L P EVSS T S + S ++Y + YGCQMN
Sbjct: 70 LKHF---RDLSKTGPSLKDFLTPKIEVSSETISVPNIPYIQNIDGSDQKVYFDVYGCQMN 126
Query: 90 VNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKK 149
VND E++ SI+K+ GY +V ++ E A +I + TC+IRD AE KVW +L ++++ K+
Sbjct: 127 VNDTEVIWSILKSHGYRKVNDIIE-ANIILLVTCSIRDNAEQKVWNKLTDLNNVRKKNKR 185
Query: 150 NVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQK 209
P KI +LGCMAERLKDKIL+ K+V+V+ GPD+Y+DLPRLL D +
Sbjct: 186 ----------FPVKIGLLGCMAERLKDKILEKGKLVEVIAGPDSYKDLPRLLSVPD-NET 234
Query: 210 GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
IN +LS +ETYAD++PVR+ +S +A+V++MRGC+NMC++CIVPFTRGRERSRP++SIV
Sbjct: 235 AINVVLSFDETYADVTPVRLDPSSTSAYVTIMRGCDNMCTYCIVPFTRGRERSRPIDSIV 294
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
KEV L EGVKEV LLGQNVNSY DTS E V L++GF ++ K KK G RF
Sbjct: 295 KEVQSLSDEGVKEVILLGQNVNSYRDTSQSEFYVNNNIETHLAKGFKTVYKNKKGGRRFV 354
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
+LLD +S PEMR R+TSPHPKDFPDE+L ++ +RPN+CK IHLPAQ+GNSAVLERMRR
Sbjct: 355 ELLDEVSRINPEMRIRFTSPHPKDFPDEVLQLIAERPNICKQIHLPAQSGNSAVLERMRR 414
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GYTREAY+DLV IR+ IP++ SSDFI GFCGETEEE DTL+L++ V Y+ A++F+YS
Sbjct: 415 GYTREAYIDLVHHIRETIPNICFSSDFITGFCGETEEEFQDTLSLIELVKYNKAFLFSYS 474
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MRE+T AHR Y DDVP VKQ RL +I +R Q+G +QLVLVE P+K++ D
Sbjct: 475 MREKTTAHRRYKDDVPPSVKQSRLERMISTYRTEIENVNKLQIGQLQLVLVEQPSKRS-D 533
Query: 510 TELVGKSDRGHRVAF 524
++D RV
Sbjct: 534 ENFQARNDGNTRVVI 548
>gi|332248854|ref|XP_003273580.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 1
[Nomascus leucogenys]
Length = 623
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/493 (52%), Positives = 344/493 (69%), Gaps = 19/493 (3%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 95 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLTLDELLGR----QRKVYLETYGCQMNVN 150
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 151 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 202
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P KI +LGCMAERLK++IL+ +KMVD++ GPDAYRDLP+LL + GQ+
Sbjct: 203 -TRRPRSRVPLKIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPQLLAVAESGQQAA 261
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 262 NVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 321
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA L
Sbjct: 322 VKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVPTNLSRGFTTNYKTKQGGLRFAHL 379
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE M RGY
Sbjct: 380 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMWRGY 439
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y++ ++FAYSMR
Sbjct: 440 SREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNIGFLFAYSMR 499
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T+
Sbjct: 500 QKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANQTSVGCTQLVLVEGLSKRSA-TD 558
Query: 512 LVGKSDRGHRVAF 524
L G++D +V F
Sbjct: 559 LCGRNDGNLKVIF 571
>gi|410920611|ref|XP_003973777.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Takifugu rubripes]
Length = 597
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/447 (55%), Positives = 327/447 (73%), Gaps = 12/447 (2%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNVND EI SI++ GY + + + A+V+ + TC+IR+ AE +W RL
Sbjct: 95 KVYFETYGCQMNVNDTEIAWSILQKKGYQRTLELSQ-ADVVLLVTCSIREKAEQTIWNRL 153
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K++ R +S+ P KI +LGCMAERLK ++L+ +K+VD++ GPDAYRDL
Sbjct: 154 QQLTAMKKK--------RLKSQSPMKIGILGCMAERLKTEVLEREKLVDILAGPDAYRDL 205
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
PRLL D GQ+ N LLSLEETYADI PV + +A+VS+MRGC+NMC++CIVPFTR
Sbjct: 206 PRLLAVADGGQQASNVLLSLEETYADIMPVHHAPQGYSAYVSIMRGCDNMCTYCIVPFTR 265
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSRPV S+++EV L +GVKEVTLLGQNVNSY DTS +++ +LS GF +
Sbjct: 266 GRERSRPVGSVLEEVRMLSDQGVKEVTLLGQNVNSYRDTS--QQQFCGTELTQLSRGFKT 323
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ + K GLRF+DLLD +S P+MR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ
Sbjct: 324 IYRTKLGGLRFSDLLDHVSRIDPDMRIRFTSPHPKDFPDEVLQLIAERKNICKQIHLPAQ 383
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ MRRGYTRE YLDLV+ IR IIP+V LSSDFI GFCGETEE+H TL+L++
Sbjct: 384 SGSSEILKAMRRGYTRETYLDLVKNIRTIIPEVSLSSDFISGFCGETEEDHQQTLSLIRE 443
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGY++ ++FAYSMR++T A DDVP EVKQRRL E I FRE + + +G+ QL
Sbjct: 444 VGYNVGFLFAYSMRKKTQAFHRLQDDVPAEVKQRRLEECISVFREEAARVNGALIGSTQL 503
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ D EL G++D +V F
Sbjct: 504 VLVEGQSKRSAD-ELCGRTDGNTKVIF 529
>gi|195037130|ref|XP_001990018.1| GH19109 [Drosophila grimshawi]
gi|193894214|gb|EDV93080.1| GH19109 [Drosophila grimshawi]
Length = 647
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/490 (51%), Positives = 343/490 (70%), Gaps = 17/490 (3%)
Query: 38 GPGLHHFIA---QSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDM 93
GPGL F + + L+ + A + + + + + QGR ++ E YGCQMN ND
Sbjct: 115 GPGLRDFFSVKPRRRLSKEEEEDSQAVDNSIPYLSAIDYNGQGRRVHFEVYGCQMNTNDT 174
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
E+V SI+ GY +V +A+V+ + TCA+RD AE K+W RL + LK
Sbjct: 175 EVVWSILHENGYQRCEDVA-SADVVMLVTCAVRDGAEQKIWHRLRHLRALKER------- 226
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEV-DYGQKGIN 212
R +HP ++ +LGCMAERLK+++L+ ++ VDV+ GPD+Y+DLPRLL YG IN
Sbjct: 227 -RGTRRHPLQLTLLGCMAERLKERLLEQEQCVDVIAGPDSYKDLPRLLAVARHYGNSAIN 285
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LLSL+ETYAD+ PVR++ +S TAFVS+MRGC+NMC++CIVPFTRGRERSRP++SIV+EV
Sbjct: 286 VLLSLDETYADVMPVRLNSDSPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLDSIVREV 345
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLL 332
L ++GVKEVTLLGQNVNSY D SG + N ++ GF+++ K K GL FA LL
Sbjct: 346 RTLQQQGVKEVTLLGQNVNSYRDRSGENNQATTDGN--MASGFSTVYKPKTGGLPFAVLL 403
Query: 333 DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYT 392
++ PEMR R+TSPHPKDF DE+L ++RD PNVCK +HLPAQ+GN+AVL RMRRGYT
Sbjct: 404 QSVAEAVPEMRIRFTSPHPKDFSDEVLRVIRDYPNVCKQLHLPAQSGNTAVLARMRRGYT 463
Query: 393 REAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRE 452
R+AYL LV IRQ++P+VGLSSDFICGFCGETE E DT+TL+++V Y++A++FAYSMRE
Sbjct: 464 RDAYLQLVTHIRQMLPEVGLSSDFICGFCGETEAEFEDTVTLIESVRYNVAFLFAYSMRE 523
Query: 453 RTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+T AHR YVDDVP VK RL +++AFR + G QL+L+EG +K++ D+
Sbjct: 524 KTTAHRRYVDDVPTAVKTARLQRMVQAFRAGATHLHKRFEGQQQLILIEGKSKRS-DSHW 582
Query: 513 VGKSDRGHRV 522
G++D +V
Sbjct: 583 FGRNDANIKV 592
>gi|291388708|ref|XP_002710877.1| PREDICTED: CDK5 regulatory subunit associated protein 1
[Oryctolagus cuniculus]
Length = 588
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/494 (52%), Positives = 343/494 (69%), Gaps = 20/494 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQP----LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
L GP HF+ +S + +P D P G Q ++Y ETYGCQMNV
Sbjct: 59 LAAGPAFQHFLRNASASEEKPSFPEAEDPPPYLTADELRGR----QRKVYLETYGCQMNV 114
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ +GY ++ E A+VI + TC+IR+ AE +W RL LK
Sbjct: 115 NDTEIAWSILQKSGYLRTSDLQE-ADVILLVTCSIREKAEQTIWNRLRQLKALK------ 167
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 168 --TKRLRSRGPLRIGILGCMAERLKEEILNREKMVDLLAGPDAYRDLPRLLAVTESGQQA 225
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYAD+ PV+ S + +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++
Sbjct: 226 ANVLLSLDETYADVMPVQASPGATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILE 285
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA
Sbjct: 286 EVRQLSEQGLKEVTLLGQNVNSFRDNS--EIQFNNAVPTNLSRGFTTNYKTKQGGLRFAH 343
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRG
Sbjct: 344 LLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIGERDNICKQIHLPAQSGSSRVLEAMRRG 403
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y++ ++FAYSM
Sbjct: 404 YSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVRYNIGFLFAYSM 463
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R++T A+ DDVPEEVK RRL ELI FRE + S VG +LVLVEG +K++ +
Sbjct: 464 RQKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKVNRSSVGRTELVLVEGLSKRSA-S 522
Query: 511 ELVGKSDRGHRVAF 524
+L G++D +V F
Sbjct: 523 DLCGRNDGNLKVIF 536
>gi|443693195|gb|ELT94625.1| hypothetical protein CAPTEDRAFT_178593 [Capitella teleta]
Length = 621
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/489 (52%), Positives = 345/489 (70%), Gaps = 11/489 (2%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDM 93
L +GP L F AQS+ +++ D EV + +V+ Q R ++ ETYGCQMNVND
Sbjct: 82 LSNGPSLRDFTAQSNEASAEVAVD---GIEVPYLSHHDVNGQQRKVFFETYGCQMNVNDT 138
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
EI +I+K G+ + ++ + ++VI + TC+IR+ AE K+W+RL Y LK+ K+
Sbjct: 139 EIAWAILKENGFIKADDI-KQSDVILVMTCSIREGAEDKIWKRLKYLKSLKQLRKQ---- 193
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINT 213
+ S P KI +LGCMAERLK+K++ ++ VDVVCGPDAYRDLPRLL GQ +N
Sbjct: 194 -KQPSAPPVKIGILGCMAERLKEKLISTERAVDVVCGPDAYRDLPRLLSVAGTGQSAVNV 252
Query: 214 LLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVD 273
LSLEETYAD+ PVRI+ S +AF+S+MRGC+NMC++CIVPFTRGRERSRP++SI++EV
Sbjct: 253 QLSLEETYADVMPVRINSTSTSAFISIMRGCDNMCTYCIVPFTRGRERSRPIDSIIEEVK 312
Query: 274 ELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLD 333
L +G++EVTLLGQNVNSY DTS P + S GF ++ K K G RF+DLL+
Sbjct: 313 ILSDQGLREVTLLGQNVNSYRDTSSAVSYSIPEDKTKNSRGFKTVYKPKVGGRRFSDLLE 372
Query: 334 RLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTR 393
++S PEMR R+TSPHPKDFPDE+LY++RDR N+C +IHLPAQ+G+++VL+ MRRGYT
Sbjct: 373 KVSEVDPEMRIRFTSPHPKDFPDEVLYLIRDRKNICNHIHLPAQSGSNSVLKAMRRGYTL 432
Query: 394 EAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRER 453
E+Y++LV+ I IIPDV LSSDFI GFCGETEE+H TL LM+ V Y +AY F YSMR++
Sbjct: 433 ESYMELVEHILSIIPDVALSSDFIAGFCGETEEDHEATLDLMRKVKYSVAYTFPYSMRQK 492
Query: 454 THAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELV 513
T A DDVP EVK RR EL + +RE + +Q G QL+L+EG +K++ + +L
Sbjct: 493 TGAFHRLNDDVPSEVKLRRSGELAKVYREEVLKLNLAQTGETQLILIEGDSKRS-EYDLA 551
Query: 514 GKSDRGHRV 522
G++D +V
Sbjct: 552 GRNDANTKV 560
>gi|449486393|ref|XP_002192492.2| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Taeniopygia guttata]
Length = 566
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/492 (52%), Positives = 346/492 (70%), Gaps = 23/492 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDME 94
LP GP L HF+ ++ + P +L P E S G+ ++Y ETYGCQMNV+D E
Sbjct: 44 LPAGPDLRHFLRAAAAGQAGPWPELPP--EPGSTPGAP-----KVYLETYGCQMNVSDTE 96
Query: 95 IVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATG 154
IV +I++ GY+ + E A+V+ + TC++R+ AEH VW RL + LK + A
Sbjct: 97 IVWAILQKNGYARTKEL-EEADVVLLVTCSVREKAEHAVWNRLRHLRALKARRPRARAPL 155
Query: 155 RSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTL 214
++ +LGCMAERLK++IL +K+VDVV GPDAYRDLPRLL + GQ+ N L
Sbjct: 156 --------RVGILGCMAERLKEEILHKEKLVDVVAGPDAYRDLPRLLAVAESGQQAANVL 207
Query: 215 LSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDE 274
LSL+ETYADI PV+ S TAFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++EV
Sbjct: 208 LSLDETYADILPVQTSAGGTTAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILQEVRM 267
Query: 275 LWKEGVKEVTLLGQNVNSYNDTSGMEKE--VEPGANWRLSEGFNSMCKVKKMGLRFADLL 332
L +GVKEVTLLGQNVNS+ D S ++ + PG LS GF ++ K K+ GLRF+ LL
Sbjct: 268 LSDQGVKEVTLLGQNVNSFRDLSEVQFQSVTAPG----LSRGFRTVYKAKQGGLRFSHLL 323
Query: 333 DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYT 392
D++S PEMR R+TSPHPKDFPDE+L ++++R N+CK++HLPAQ+G++ VLE MRRGYT
Sbjct: 324 DQVSRIDPEMRIRFTSPHPKDFPDEVLQLIQERHNICKHLHLPAQSGSTRVLEAMRRGYT 383
Query: 393 REAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRE 452
REAYL+LV +R IP V LSSDFI GFCGETEE+H T++L++ V Y++ ++FAYSMR+
Sbjct: 384 REAYLELVHHVRDSIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVRYNVGFLFAYSMRQ 443
Query: 453 RTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+T AH DDVP +VK++RL +LI FRE + VG QLVLVEGP+K++ +EL
Sbjct: 444 KTRAHHRLQDDVPADVKKQRLEQLIATFREEAARANAELVGRAQLVLVEGPSKRS-ASEL 502
Query: 513 VGKSDRGHRVAF 524
G++D +V F
Sbjct: 503 CGRNDGNIKVIF 514
>gi|195443590|ref|XP_002069485.1| GK11551 [Drosophila willistoni]
gi|194165570|gb|EDW80471.1| GK11551 [Drosophila willistoni]
Length = 576
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/472 (54%), Positives = 335/472 (70%), Gaps = 14/472 (2%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIV 96
GPGL F + + +L + V + + QGR ++ E YGCQMN ND E+V
Sbjct: 48 GPGLQDFFTAKPTSRLKENEELDVDNSVPYLNSIDFNGQGRKVHFEVYGCQMNTNDTEVV 107
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRS 156
SI++ GY + E A+VI + TCA+RD AE K+W RL + LK + RS
Sbjct: 108 WSILQENGYQRCHDQNE-ADVIMLVTCAVRDGAEQKIWNRLRHLRALKEK--------RS 158
Query: 157 QSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGINTLL 215
+ P ++ +LGCMAERLK+++L+ +K VDV+ GPD+Y+DLPRLL YG IN LL
Sbjct: 159 SRRGPLQLTLLGCMAERLKERLLEQEKSVDVIAGPDSYKDLPRLLAVSRHYGNSAINVLL 218
Query: 216 SLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDEL 275
SL+ETYAD+ PVR++ S TAFVS+MRGC+NMCS+CIVPFTRGRERSRP+ESIV+EV L
Sbjct: 219 SLDETYADVMPVRLNSESPTAFVSIMRGCDNMCSYCIVPFTRGRERSRPLESIVREVLTL 278
Query: 276 WKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL 335
++GVKEVTLLGQNVNSY D SG +++ A GF ++ K K GL F+ LL+ +
Sbjct: 279 QEQGVKEVTLLGQNVNSYRDRSGQDEDNTKDAP---VPGFKTVYKPKSGGLPFSKLLESV 335
Query: 336 SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREA 395
+ PEMR R+TSPHPKDF D++L I+RD PNVCK +HLPAQ+GNS VL RMRRGYTREA
Sbjct: 336 AEAVPEMRIRFTSPHPKDFSDDVLRIIRDYPNVCKQLHLPAQSGNSQVLARMRRGYTREA 395
Query: 396 YLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTH 455
YL+LV+ IR+I+P VGLSSDFICGFCGET+EE DT++L++ V Y++AY+FAYSMRE+T
Sbjct: 396 YLELVEHIRKILPHVGLSSDFICGFCGETDEEFEDTISLIQKVRYNVAYLFAYSMREKTT 455
Query: 456 AHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKA 507
AHR +VDDVP VK +RL +++AFR Q + VG QL+L+EG +K++
Sbjct: 456 AHRRFVDDVPLAVKTQRLQRMVQAFRTGATQLHQEFVGQQQLILIEGRSKRS 507
>gi|326932093|ref|XP_003212155.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Meleagris gallopavo]
Length = 541
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/446 (56%), Positives = 326/446 (73%), Gaps = 12/446 (2%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y ETYGCQMNVND EI +I++ +GY+ E A+VI + TC++RD AE +W RL
Sbjct: 56 LYLETYGCQMNVNDTEIAWAILQKSGYTRTKEADE-ADVILLVTCSVRDKAEQAIWNRLQ 114
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
+ LK R Q+ P +I +LGCMAERLK++IL +K+VD+V GPDAYRDLP
Sbjct: 115 HLKALKAR--------RRQACLPLRIGILGCMAERLKEEILHREKLVDIVAGPDAYRDLP 166
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
RLL GQ+ N LLSL+ETYADI PV+ S TAFVS+MRGC+NMCS+CIVPFTRG
Sbjct: 167 RLLAVAQSGQQAANVLLSLDETYADILPVQTSAGGKTAFVSIMRGCDNMCSYCIVPFTRG 226
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERSRP+ SI++EV L +GVKEVTLLGQNVNS+ D S E + + A LS GF+++
Sbjct: 227 RERSRPIASILQEVKILSDQGVKEVTLLGQNVNSFRDMS--EVQFQSAAAPVLSRGFSTV 284
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
K K GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++++R N+CK +HLPAQ+
Sbjct: 285 YKAKPGGLRFAHLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIQERHNICKQLHLPAQS 344
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ VLE MRRGYTREAYL+LVQ +R IP V LSSDFI GFCGETEE+H T++L++ V
Sbjct: 345 GSTRVLEAMRRGYTREAYLELVQHVRNSIPGVSLSSDFIAGFCGETEEDHQQTVSLLREV 404
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
Y++ ++FAYSMR++T A+ DDVP +VK+RRL ELI FRE + ++ VG QLV
Sbjct: 405 RYNVGFLFAYSMRQKTRAYHRLQDDVPADVKRRRLEELITVFREEAARANEAMVGQSQLV 464
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEGP+K++ +EL G++D +V F
Sbjct: 465 LVEGPSKRSA-SELCGRNDGNIKVIF 489
>gi|354477922|ref|XP_003501166.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 [Cricetulus
griseus]
gi|344246635|gb|EGW02739.1| CDK5 regulatory subunit-associated protein 1 [Cricetulus griseus]
Length = 591
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/495 (52%), Positives = 346/495 (69%), Gaps = 22/495 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQP----LADLAPASEVSSATGSEVHS-QGRIYQETYGCQMN 89
L GP HF+ +S+ +P + D P TG E+ Q ++Y ETYGCQMN
Sbjct: 60 LAAGPTFQHFLRSASVLQEKPSFPEVEDPPPY-----LTGDELLGRQRKVYLETYGCQMN 114
Query: 90 VNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKK 149
VND EI SI++ +G+ N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 VNDTEIAWSILQKSGFLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK----- 168
Query: 150 NVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQK 209
T RS+S+ P +I +LGCMAERLK +IL+ +K VD++ GPDAYRDLPRLL V+ GQ+
Sbjct: 169 ---TKRSRSRVPLRIGILGCMAERLKGEILNREKTVDLLAGPDAYRDLPRLLAVVESGQQ 225
Query: 210 GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI+
Sbjct: 226 AANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASIL 285
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
EV +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRF+
Sbjct: 286 DEVRKLSEQGLKEVTLLGQNVNSFRDNS--EIQFNNAVPTNLSRGFTTNYKTKQGGLRFS 343
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G++ VL+ MRR
Sbjct: 344 HLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIHERHNICKQIHLPAQSGSNRVLDAMRR 403
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GY+REAY+ LV IR+ IP V LSSDFI GFCGETE++H T++L++ V Y+ ++FAYS
Sbjct: 404 GYSREAYVALVHHIRECIPGVSLSSDFITGFCGETEDDHLQTVSLLREVQYNAGFLFAYS 463
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MR++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++
Sbjct: 464 MRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEASRANQTSVGCTQLVLVEGFSKRS-S 522
Query: 510 TELVGKSDRGHRVAF 524
T+L G++D +V F
Sbjct: 523 TDLCGRNDANLKVIF 537
>gi|194902322|ref|XP_001980672.1| GG17285 [Drosophila erecta]
gi|190652375|gb|EDV49630.1| GG17285 [Drosophila erecta]
Length = 586
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/488 (52%), Positives = 334/488 (68%), Gaps = 13/488 (2%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIV 96
GPG F A + + + + V + + GR ++ E YGCQMN ND E+V
Sbjct: 52 GPGFQDFFAVKPASRRKTDEEEHVDTSVPYLNAIDFNGNGRKVHFEVYGCQMNTNDTEVV 111
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRS 156
SI+K +GY PE A+VI + TCA+RD AE ++W RL + +K + RS
Sbjct: 112 FSILKESGYLRC-QEPEEADVIMLVTCAVRDGAEQRIWNRLKHLRAMKNK--------RS 162
Query: 157 QSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGINTLL 215
+HP ++ +LGCMAERLK+K+L+ ++ VDV+ GPD+Y+DLPRLL YG IN LL
Sbjct: 163 TRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLL 222
Query: 216 SLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDEL 275
SL+ETYAD+ PVR++ S TAFVS+MRGC+NMC++CIVPFTRGRERSRP+ SIV E L
Sbjct: 223 SLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLHSIVAEAKAL 282
Query: 276 WKEGVKEVTLLGQNVNSYNDTSGMEK-EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDR 334
++GVKEVTLLGQNVNSY D S E+ E GF+++ K K G FA LL
Sbjct: 283 AEQGVKEVTLLGQNVNSYRDRSAQEQQEALCPEEATPVPGFSTVYKPKTGGTPFAALLRA 342
Query: 335 LSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTRE 394
++ PEMR R+TSPHPKDF DE+L ++RD PNVCK +HLPAQ+GN+ VL+RMRRGY+RE
Sbjct: 343 VAQAVPEMRVRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLDRMRRGYSRE 402
Query: 395 AYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERT 454
AYL+LVQ IRQ +P+VGLSSDFICGFCGETEEE DT++L++ V Y++AY+FAYSMRE+T
Sbjct: 403 AYLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKT 462
Query: 455 HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVG 514
AHR Y DDVP VK RL +++ FRE Q + G QL+LVEG +K++ D G
Sbjct: 463 TAHRRYKDDVPLNVKNERLQRMVQVFREGATQLHRQMEGQEQLILVEGKSKRS-DAHWFG 521
Query: 515 KSDRGHRV 522
++D +V
Sbjct: 522 RNDANIKV 529
>gi|307181219|gb|EFN68916.1| CDK5RAP1-like protein [Camponotus floridanus]
Length = 533
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/491 (52%), Positives = 343/491 (69%), Gaps = 21/491 (4%)
Query: 34 DLPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDM 93
++ DGP L F+ S + D+ V +Q ++Y E YGCQMN+ND
Sbjct: 3 NIKDGPSLRDFVESS-------IVDIPNEESVPYVQDIRGENQ-KVYFEIYGCQMNINDA 54
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
+I+ SI+K+ GY +V ++A++I + TC+IRD AE KVW +L ++++ KKN
Sbjct: 55 DIIWSILKSHGYKHTQSV-DDADIILLVTCSIRDNAEQKVWNKLEMLNGIRKKKKKNSI- 112
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINT 213
KI +LGCMAERLK KILD K+VDV+ GPD+Y+DLPRLL D + IN
Sbjct: 113 ---------KIGLLGCMAERLKTKILDKGKLVDVIAGPDSYKDLPRLLAVTD-NETAINV 162
Query: 214 LLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVD 273
+LS +ETYAD++PVR+ ++SV A+VS+MRGC+NMC++CIVPFTRGRERSRP+ SI+ EV
Sbjct: 163 VLSFDETYADVTPVRLDQDSVGAYVSIMRGCDNMCTYCIVPFTRGRERSRPIASILDEVR 222
Query: 274 ELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLD 333
+L +GVKE+TLLGQNVNSY D S E V L++GF ++ K KK GLRF+DLLD
Sbjct: 223 QLSDQGVKEITLLGQNVNSYRDLSQSEFVVPTDMQTHLAKGFKTVYKNKKGGLRFSDLLD 282
Query: 334 RLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTR 393
++SL PE+R R+TSPHPKDFPDE+L+++ +RPN+CK IHLPAQ+GNSAVL+RMRRGYTR
Sbjct: 283 KVSLINPEIRIRFTSPHPKDFPDEVLHLIAERPNICKQIHLPAQSGNSAVLDRMRRGYTR 342
Query: 394 EAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRER 453
EAYLDLV IR I+PD+ LSSDFI GFCGETEEE DTL+L+ V Y+ AY++ YSMRE+
Sbjct: 343 EAYLDLVYHIRNILPDIYLSSDFIAGFCGETEEEFQDTLSLIDEVKYNNAYLYPYSMREK 402
Query: 454 THAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELV 513
T AHR Y DDV VK R+ +I +R+ + Q+G QLVLVEGP+K+ + L
Sbjct: 403 TTAHRRYKDDVESHVKIERMNRMIMLYRKEVEKLNKVQIGQHQLVLVEGPSKRRSEY-LQ 461
Query: 514 GKSDRGHRVAF 524
G++D RV
Sbjct: 462 GRNDGNVRVIL 472
>gi|432858872|ref|XP_004068980.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Oryzias latipes]
Length = 579
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 264/519 (50%), Positives = 353/519 (68%), Gaps = 16/519 (3%)
Query: 8 ARRLTTRQLKRSFSLNLSRNFSHSSLDLPDGPGLHHFIAQSSLTASQPLADLAPASEVSS 67
ARR + R + + R S + GP FI + S+ +P + SE +
Sbjct: 25 ARRCSARADGEAPAGPRRRTAGSLSAQVGSGPSFQDFIRRVSV--KKPAIEKEDLSENPN 82
Query: 68 ATGSEVH--SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAI 125
++ + ++Y ETYGCQMNVND EI SI++ GY + E A+V+ + TC+I
Sbjct: 83 YLPEDLQEGNSRKVYFETYGCQMNVNDTEIAWSILQKKGYERTAQLSE-ADVVLLVTCSI 141
Query: 126 RDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMV 185
R+ AE +W RL +K + R ++ P KI VLGCMAERLK ++L+ +K+V
Sbjct: 142 REKAEQTIWNRLKQLTAMKNK--------RMKTPSPMKIGVLGCMAERLKTELLEREKLV 193
Query: 186 DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCN 245
DV+ GPDAYRDLPRLL + GQ+ N LLSLEETYAD+ PV+++ +AFVS+MRGC+
Sbjct: 194 DVLAGPDAYRDLPRLLAVAEGGQQASNVLLSLEETYADVMPVQLAPQGHSAFVSIMRGCD 253
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
NMCS+CIVPFTRGRERSRP+ SI++EV L +GVKEVTLLGQNVNSY DTS E++
Sbjct: 254 NMCSYCIVPFTRGRERSRPIGSILEEVRILSDQGVKEVTLLGQNVNSYRDTS--EEQFCS 311
Query: 306 GANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
RLS GF ++ K K+ GLRF+DLL+R S P MR R+TSPHPKDFPDE+L ++ +R
Sbjct: 312 SDPTRLSRGFQTVYKPKQGGLRFSDLLERASRVNPHMRIRFTSPHPKDFPDEVLELIAER 371
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETE 425
N+CK IHLPAQ+G+S VL+ MRRGYTREAYLDLV+ I+Q+IP V LSSDFI GFCGETE
Sbjct: 372 ENICKQIHLPAQSGSSQVLKAMRRGYTREAYLDLVRNIKQMIPGVSLSSDFISGFCGETE 431
Query: 426 EEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG 485
++H TL+L++ VGY++ ++FAYSMR++T A DDVP EVK+RRL E I FR+
Sbjct: 432 DDHQQTLSLIRQVGYNVGFLFAYSMRKKTQAFHRLQDDVPAEVKRRRLEECISVFRQEAL 491
Query: 486 QCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G+ QLVLVEG +K++ + EL G++D RV F
Sbjct: 492 RVNAALIGSSQLVLVEGESKRSAE-ELCGRTDGNMRVVF 529
>gi|32129446|sp|Q96SZ6.2|CK5P1_HUMAN RecName: Full=CDK5 regulatory subunit-associated protein 1;
AltName: Full=CDK5 activator-binding protein C42
gi|119596731|gb|EAW76325.1| CDK5 regulatory subunit associated protein 1, isoform CRA_h [Homo
sapiens]
Length = 601
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/507 (51%), Positives = 345/507 (68%), Gaps = 33/507 (6%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKE--------------GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
V +L ++ G+KEVTLLGQNVNS+ D S E + LS GF +
Sbjct: 286 VKKLSEQVFLPPRPPKVLGLQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGFTT 343
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ
Sbjct: 344 NYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQ 403
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S VLE MRRGY+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++
Sbjct: 404 SGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLRE 463
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG QL
Sbjct: 464 VQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQL 523
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ T+L G++D +V F
Sbjct: 524 VLVEGLSKRSA-TDLCGRNDGNLKVIF 549
>gi|317418553|emb|CBN80591.1| CDK5 regulatory subunit-associated protein 1 [Dicentrarchus labrax]
Length = 569
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/498 (51%), Positives = 345/498 (69%), Gaps = 20/498 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDME 94
+ GP FI S+ AD + E+ + ++Y ETYGCQMNVND +
Sbjct: 52 ISSGPSFQDFIKGVSVNNKTYAADGECEEHSYLSEDLEMGNSRKVYFETYGCQMNVNDTD 111
Query: 95 IVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATG 154
I SI++ GY +++ E A+V+ + TC+IR+ AE +W RL +K+
Sbjct: 112 IAWSILQRKGYQRTVDLRE-ADVVLLVTCSIREKAEQTIWNRLQELKAMKKR-------- 162
Query: 155 RSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTL 214
R ++ P KI +LGCMAERLK +IL+ +K+VDV+ GPDAYRDLPRLL D GQ+ N L
Sbjct: 163 RLKTHTPMKIGILGCMAERLKTEILEREKLVDVLAGPDAYRDLPRLLTVADGGQQASNVL 222
Query: 215 LSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDE 274
LSLEETYAD+ PV + +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++EV
Sbjct: 223 LSLEETYADVMPVHHAPQGRSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVSSILEEVRM 282
Query: 275 LWKE--------GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGL 326
L ++ GVKEVTLLGQNVNSY DTS E++ +LS GF ++ + K+ GL
Sbjct: 283 LSEQASYNLNTKGVKEVTLLGQNVNSYRDTS--EEQFCSSDLTQLSRGFKTVYRTKQGGL 340
Query: 327 RFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLER 386
RF+DLLDR+S P+MR R+TSPHPKDFPDE+L+++ +R N+C+ IHLPAQ+G+S VLE
Sbjct: 341 RFSDLLDRVSRIDPDMRIRFTSPHPKDFPDEVLHLIAERGNICQQIHLPAQSGSSKVLEA 400
Query: 387 MRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMF 446
MRRGYTREAYLDLV+ I+ I+P+V LSSDFI GFCGETE++H TL+L++ VGY++ ++F
Sbjct: 401 MRRGYTREAYLDLVKNIKAIMPEVSLSSDFISGFCGETEDDHQQTLSLIREVGYNVGFLF 460
Query: 447 AYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKK 506
AYSMR++THA DDVP EVKQ+RL E I FRE + + +G++QLVLVEG +K+
Sbjct: 461 AYSMRKKTHAFHRLQDDVPAEVKQQRLAECIRVFREEAARVNAALIGSMQLVLVEGESKR 520
Query: 507 APDTELVGKSDRGHRVAF 524
+ +L G++D +V F
Sbjct: 521 SAK-DLCGRTDGNMKVIF 537
>gi|340371091|ref|XP_003384079.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Amphimedon queenslandica]
Length = 577
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 264/516 (51%), Positives = 350/516 (67%), Gaps = 27/516 (5%)
Query: 20 FSLNLSRNFS----HSSLDLPDGPGLHHFIAQSSLTASQPLA------DLAPASEVSSAT 69
F+ +L FS +SS LP GPGL FI + Q D +P ++ T
Sbjct: 20 FTCSLRSFFSFMRYYSSCSLPPGPGLEDFIKEREFKDIQLSGTALMEDDHSPPPYLNEET 79
Query: 70 GSEVHSQGR-IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDY 128
+ + R +Y ETYGCQMN ND EI SI+ NAGY + +A+VI TCAIR+
Sbjct: 80 ---IAGRNRKVYFETYGCQMNANDTEIAWSILSNAGYRRAKEI-TDADVILAVTCAIREN 135
Query: 129 AEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVV 188
AE+KVW RL+YF LK++ RS + P K+ +LGCMAERLK+K+LD DK VD++
Sbjct: 136 AENKVWNRLDYFSHLKQK--------RSANLPPLKVGLLGCMAERLKEKLLDTDKQVDLI 187
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
GPDAYRDLPRLL + G+ +N LSL+ETYAD+SPVR++++S TAFVS+MRGC+NMC
Sbjct: 188 AGPDAYRDLPRLLAVTESGEAAVNVALSLDETYADVSPVRLNESSPTAFVSIMRGCDNMC 247
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
SFCIVPFTRGRERSRP+ SI+ EV L ++G+K+VTLLGQNVNSY + + +
Sbjct: 248 SFCIVPFTRGRERSRPMSSIISEVKSLSEQGIKQVTLLGQNVNSYRE---LSPSHSSSSL 304
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
LS GF+S+ K K+ G RFA+LL ++ P+MR R+TSPHPKDFPDELL ++R+ N+
Sbjct: 305 TNLSRGFSSIYKSKEGGRRFAELLHEVAQVDPDMRIRFTSPHPKDFPDELLEVIRENGNI 364
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
CK+IHLP Q+G++ +L+ MRRG+TREAYL LV +IR IIP V +S+D I GFC E EE+H
Sbjct: 365 CKHIHLPIQSGSTRILQLMRRGHTREAYLSLVDRIRSIIPGVAISTDIIAGFCDEREEDH 424
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
DTL+LM+ V YDMA+MFAYSMR++THA+ D VPE++K++RL E+I F +G
Sbjct: 425 NDTLSLMEQVKYDMAFMFAYSMRKKTHAYHRLKDSVPEDIKKKRLAEIISTFYSLSGSRN 484
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+GT QLVL+ K+ + + GKSD H V F
Sbjct: 485 KRFIGTEQLVLLVSATKRN-EMDCKGKSDTNHTVIF 519
>gi|119596726|gb|EAW76320.1| CDK5 regulatory subunit associated protein 1, isoform CRA_c [Homo
sapiens]
Length = 592
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/507 (51%), Positives = 345/507 (68%), Gaps = 33/507 (6%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKE--------------GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
V +L ++ G+KEVTLLGQNVNS+ D S E + LS GF +
Sbjct: 286 VKKLSEQVFLPPRPPKVLGLQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGFTT 343
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ
Sbjct: 344 NYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQ 403
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S VLE MRRGY+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++
Sbjct: 404 SGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLRE 463
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG QL
Sbjct: 464 VQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQL 523
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ T+L G++D +V F
Sbjct: 524 VLVEGLSKRSA-TDLCGRNDGNLKVIF 549
>gi|118792628|ref|XP_320425.3| AGAP012104-PA [Anopheles gambiae str. PEST]
gi|116116988|gb|EAA00300.4| AGAP012104-PA [Anopheles gambiae str. PEST]
Length = 538
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/487 (53%), Positives = 342/487 (70%), Gaps = 16/487 (3%)
Query: 35 LPDGPGLHHFI--AQSSLTASQPLADLA-PASEVSSATGSEVHSQGR-IYQETYGCQMNV 90
L +GP L F+ + T++ +AD P ++ T + Q R ++ E YGCQMN
Sbjct: 3 LKEGPSLQDFLRGTTEAETSTVYIADRGKPIPYIAPET---LRGQKRKVFLEVYGCQMNT 59
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EIV SI+K Y +N+ E A+++ + TCAIR+ AE VW RL + LKR+ + N
Sbjct: 60 NDTEIVWSILKAHQYHRTVNLKE-ADIVLMMTCAIREGAEDTVWNRLKHLRLLKRKRETN 118
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
+ P +I VLGCMAERLK ++++ + VDVV GPDAY+DLPRLL GQK
Sbjct: 119 -------GEKPLQIGVLGCMAERLKKQLVEKEHSVDVVAGPDAYKDLPRLLAIGQRGQKA 171
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
IN LLSL+ETYAD+ PV++ + S TAFVS+MRGC+NMCS+CIVPFTRG+ERSRP++SI +
Sbjct: 172 INVLLSLDETYADVVPVKLDRKSKTAFVSIMRGCDNMCSYCIVPFTRGKERSRPIKSIRE 231
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV +L EG++E+TLLGQNVNSY DTS E P L+ GF ++ K K GLRFA+
Sbjct: 232 EVLQLENEGIREITLLGQNVNSYRDTSDESLEDAPKEATLLAPGFRTVYKSKVGGLRFAE 291
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LL L+ PEMR R+TSPHPKDFP ++L + PN+C +HLPAQ+GN+ VLERMRRG
Sbjct: 292 LLTELAEAVPEMRIRFTSPHPKDFPVDVLETIAKYPNICNSLHLPAQSGNTQVLERMRRG 351
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
YTREAYL+LV+++R+IIP+V LSSDFICGFCGE+E E ADT++L++ VGY A++FAYSM
Sbjct: 352 YTREAYLNLVEEVRRIIPNVTLSSDFICGFCGESEPEFADTVSLIEQVGYHAAFLFAYSM 411
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
RE+T AHR Y DDVPEEVKQ RL +I AFR + V +LVL+EG +K++ T
Sbjct: 412 REKTTAHRRYSDDVPEEVKQERLRRMIAAFRREAERLNSLFVDRTELVLIEGYSKRS-RT 470
Query: 511 ELVGKSD 517
+L G++D
Sbjct: 471 DLAGRND 477
>gi|348510459|ref|XP_003442763.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Oreochromis niloticus]
Length = 598
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/491 (52%), Positives = 346/491 (70%), Gaps = 14/491 (2%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLADLAPASEVSSAT-GSEVHSQGRIYQETYGCQMNVNDM 93
L GP FI S+ AD P+ + + G + + ++Y ETYGCQMNVND
Sbjct: 52 LSSGPSFQDFIKGLPANRSRA-ADEEPSEKHDYLSEGLLMGNSRKVYFETYGCQMNVNDT 110
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
EI SI++ GY ++ E A+V+ + TC++R+ AE +W RL +KR+
Sbjct: 111 EIAWSILQKKGYQRTAHLSE-ADVVLLVTCSVREKAEQTIWNRLQQLTAMKRK------- 162
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINT 213
R ++ P KI +LGCMAERLK ++L +K+VDV+ GPDAYRDLPRLL D GQ+ N
Sbjct: 163 -RLKTHTPMKIGILGCMAERLKMELLAREKLVDVLAGPDAYRDLPRLLAVADGGQQVCNV 221
Query: 214 LLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVD 273
LLSLEETYAD+ PV + +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++EV
Sbjct: 222 LLSLEETYADVMPVHHAPRGHSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVCSILEEVR 281
Query: 274 ELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLD 333
L +GVKEVTLLGQNVNSY D S E++ +LS GF ++ + K+ GLRF+DLLD
Sbjct: 282 MLSDQGVKEVTLLGQNVNSYRDMS--EEQFFGSDATKLSRGFKTIYQTKRGGLRFSDLLD 339
Query: 334 RLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTR 393
++S P++R R+TSPHPKDFPDE+L+++ +R N+CK IHLPAQ+G+S VL+ MRRGYTR
Sbjct: 340 QVSRIDPDVRIRFTSPHPKDFPDEVLHLIAERRNICKQIHLPAQSGSSRVLKAMRRGYTR 399
Query: 394 EAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRER 453
EAYLDLV+ I+QIIPDV LSSDFI GFCGETE++H TL+L++ VGY++ ++FAYSMR++
Sbjct: 400 EAYLDLVRNIKQIIPDVSLSSDFISGFCGETEDDHQQTLSLIREVGYNVGFLFAYSMRKK 459
Query: 454 THAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELV 513
THA DD+P EVKQRRL E I FRE + + +G+ QLVLVEG +K++ + +L
Sbjct: 460 THAFHRLQDDIPVEVKQRRLEECITVFREEAERVNAALIGSTQLVLVEGESKRSAE-DLC 518
Query: 514 GKSDRGHRVAF 524
G++D +V F
Sbjct: 519 GRTDGNMKVIF 529
>gi|410954014|ref|XP_003983662.1| PREDICTED: LOW QUALITY PROTEIN: CDK5 regulatory subunit-associated
protein 1 [Felis catus]
Length = 584
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/492 (52%), Positives = 346/492 (70%), Gaps = 18/492 (3%)
Query: 35 LPDGPGLHHFIAQSSLTASQP-LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDM 93
L GP HF+ + +P + D P V +G Q ++Y ETYGCQMNVND
Sbjct: 57 LAAGPTFQHFLRSALDPQEKPDVEDPPPYLTVDELSGR----QRKVYLETYGCQMNVNDT 112
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
EI S+++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK T
Sbjct: 113 EIAWSVLQKSGYLRTRNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK--------T 163
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINT 213
R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+ N
Sbjct: 164 KRLRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANV 223
Query: 214 LLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVD 273
LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++EV
Sbjct: 224 LLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILEEVR 283
Query: 274 ELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLD 333
+L ++G+KEVTLLGQNVNS+ D+S E + + LS GF++ K K+ GLRFA LLD
Sbjct: 284 KLSEQGLKEVTLLGQNVNSFRDSS--EVQFNNAVSTNLSRGFSTNYKPKQGGLRFAHLLD 341
Query: 334 RLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTR 393
+S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY+R
Sbjct: 342 HVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGYSR 401
Query: 394 EAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRER 453
EAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR++
Sbjct: 402 EAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYNMGFLFAYSMRQK 461
Query: 454 THAHRNYVDDVPEEVKQ-RRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
T A+ DDVPE + RRL ELI FRE + + VG QLVLVEG +K++ T+L
Sbjct: 462 TRAYHRLKDDVPERGENXRRLEELITVFREEATKANMASVGCTQLVLVEGVSKRSA-TDL 520
Query: 513 VGKSDRGHRVAF 524
G++D +V F
Sbjct: 521 CGRNDGNLKVIF 532
>gi|355563214|gb|EHH19776.1| CDK5 activator-binding protein C42 [Macaca mulatta]
gi|355784568|gb|EHH65419.1| CDK5 activator-binding protein C42 [Macaca fascicularis]
Length = 601
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 264/507 (52%), Positives = 345/507 (68%), Gaps = 33/507 (6%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLTMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVDV+ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDVLAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ + ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTNPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILEE 285
Query: 272 VDELWKE--------------GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
V +L ++ G+KEVTLLGQNVNS+ D S E + + LS GF +
Sbjct: 286 VKKLSEQVIYPPRPPKVLGLQGLKEVTLLGQNVNSFRDNS--EVQFNNAVSTNLSRGFTT 343
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ
Sbjct: 344 NYKAKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQ 403
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S VLE MRRGY+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++
Sbjct: 404 SGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLRE 463
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + VG QL
Sbjct: 464 VQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANQISVGCTQL 523
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ T+L G++D +V F
Sbjct: 524 VLVEGLSKRSV-TDLCGRNDGNLKVIF 549
>gi|351708389|gb|EHB11308.1| CDK5 regulatory subunit-associated protein 1 [Heterocephalus
glaber]
Length = 600
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/505 (51%), Positives = 347/505 (68%), Gaps = 30/505 (5%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR---IYQETYGCQMNVN 91
L GP HF+ +S +P + P +E +E GR +Y ETYGCQMNVN
Sbjct: 59 LATGPTFQHFLRSTSAPQEKPSS---PEAEDPPPYLTEEELLGRQRKVYLETYGCQMNVN 115
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ E +W RL+ K +
Sbjct: 116 DTEIAWSILQKSGYLRTRNLQE-ADVILLVTCSIREKPEQTIWNRLHQL--------KTL 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL +KMVD++ GPDAYRDLPRLL V+ GQ+
Sbjct: 167 KTKRLRSRVPLRIGILGCMAERLKEEILSREKMVDLLAGPDAYRDLPRLLAVVESGQQAA 226
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++E
Sbjct: 227 NVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILEE 286
Query: 272 VDEL------------WKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
V +L +K G+KEVTLLGQNVNS+ D S E + + LS GF +
Sbjct: 287 VRKLSDQVKSSPGPLSYKHGLKEVTLLGQNVNSFRDNS--EVQFNNSVSTNLSHGFTTNY 344
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
K K+ GLRF+ LLD++S PEMR R+TSPHPKDFPDE+L ++++R N+CK IHLPAQ+G
Sbjct: 345 KTKQGGLRFSHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIQERDNICKQIHLPAQSG 404
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S VLE MRRGY+REAY++LV +R+ IP V LSSDFI GFCGETEE+H T++L++ V
Sbjct: 405 SSRVLEAMRRGYSREAYVELVHHLRESIPGVCLSSDFIAGFCGETEEDHQQTVSLLREVQ 464
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
Y+ ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG QLVL
Sbjct: 465 YNTGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEASKANKTSVGCTQLVL 524
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +K++ T+L G++D +V F
Sbjct: 525 VEGLSKRSV-TDLCGRNDGNLKVIF 548
>gi|320166116|gb|EFW43015.1| HSPC167 [Capsaspora owczarzaki ATCC 30864]
Length = 712
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/502 (50%), Positives = 345/502 (68%), Gaps = 41/502 (8%)
Query: 47 QSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIVLSIMKNAGY 105
+ S+ + P +D + ++ +GR ++ ETYGCQMNVND EIV SI++ G+
Sbjct: 132 RGSVILNAPKSDRVDVENIPYVPPHQIGGEGRKVFFETYGCQMNVNDTEIVWSILQGVGF 191
Query: 106 SEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV 165
++V + A+VI + TCAIRD AE KVW RLN K++ R++ + ++
Sbjct: 192 ERTLDV-KQADVILLMTCAIRDNAERKVWSRLNEL--------KHMRLKRTKDQPISRVG 242
Query: 166 VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADIS 225
VLGCMAERLK ++L+ D++VDVV GPD+YRDLPRLL + G + +N LSL+ETYADI+
Sbjct: 243 VLGCMAERLKTQLLEKDQLVDVVAGPDSYRDLPRLLSIANQGDQAVNVQLSLDETYADIA 302
Query: 226 PVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTL 285
PVR+SK+SVTAFVS+MRGC+NMCSFCIVPFTRGRERSRP+ SIV+EV +L ++GV+EVTL
Sbjct: 303 PVRMSKDSVTAFVSIMRGCDNMCSFCIVPFTRGRERSRPLASIVEEVRQLARQGVREVTL 362
Query: 286 LGQNVNSYNDTS----GMEKEVEPGANW--------------------------RLSEGF 315
LGQNVNSY D S ++ +PG L+ GF
Sbjct: 363 LGQNVNSYRDESEPAHDAAEQGQPGNPADSPNLSAASPPPLPPSAAADTTHNVTALAAGF 422
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
S+ K K G RFA+LL +++ PEMR R+TSPHPKDFPD++L ++ NVCK +H+P
Sbjct: 423 KSIYKPKIGGRRFAELLRQVAAVDPEMRIRFTSPHPKDFPDDVLTVIASTANVCKSLHMP 482
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ+G+++VLERMRRGY+RE+YL+LV ++R++IPDV LSSDFI GFCGETE + DTL L+
Sbjct: 483 AQSGSTSVLERMRRGYSRESYLELVARVRRLIPDVTLSSDFIAGFCGETEADFKDTLDLI 542
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ GY+ Y+F YSMRE+THAHR VDDVP +VK +RL E+I +F + Q VG+
Sbjct: 543 EKAGYEYGYLFGYSMREKTHAHRKLVDDVPADVKNQRLKEMIASFYARSEQSLSRFVGSR 602
Query: 496 QLVLVEGPNKKAPDTELVGKSD 517
QLVLVE P+++A D +L G+SD
Sbjct: 603 QLVLVERPSRRAKD-QLTGRSD 623
>gi|21356207|ref|NP_650002.1| CG6345 [Drosophila melanogaster]
gi|32129453|sp|Q9VGZ1.1|CK5P1_DROME RecName: Full=CDK5RAP1-like protein
gi|7299338|gb|AAF54531.1| CG6345 [Drosophila melanogaster]
gi|17945319|gb|AAL48716.1| RE15838p [Drosophila melanogaster]
Length = 583
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/487 (51%), Positives = 334/487 (68%), Gaps = 14/487 (2%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIV 96
GPG F A + + + + V + + GR ++ E YGCQMN ND E+V
Sbjct: 52 GPGFQDFFAVKPASRLKTDEEEHVDTSVPYLNSIDFNGNGRKVHFEVYGCQMNTNDTEVV 111
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRS 156
SI+K GY PE A+VI + TCA+RD AE ++ RL + +K + RS
Sbjct: 112 FSILKENGYLRC-QEPEEADVIMLVTCAVRDGAEQRIRNRLKHLRAMKNK--------RS 162
Query: 157 QSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGINTLL 215
+HP ++ +LGCMAERLK+K+L+ ++ VDV+ GPD+Y+DLPRLL YG IN LL
Sbjct: 163 TRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLL 222
Query: 216 SLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDEL 275
SL+ETYAD+ PVR++ S TAFVS+MRGC+NMC++CIVPFTRGRERSRP+ SIV EV L
Sbjct: 223 SLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLASIVAEVKAL 282
Query: 276 WKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL 335
++GVKEVTLLGQNVNSY D + E++ A GF+++ K K G FA LL +
Sbjct: 283 AEQGVKEVTLLGQNVNSYRDRTAQEEQDSLKATP--VPGFSTVYKPKTGGTPFAALLRSV 340
Query: 336 SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREA 395
+ P+MR R+TSPHPKDF DE+L ++RD PNVCK +HLPAQ+GN+ VLERMRRGY+REA
Sbjct: 341 AQAVPDMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREA 400
Query: 396 YLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTH 455
YL+LVQ IRQ +P+VGLSSDFICGFCGETEEE DT++L++ V Y++AY+FAYSMRE+T
Sbjct: 401 YLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTT 460
Query: 456 AHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGK 515
AHR Y DDVP VK RL +++ FRE Q + G QL+L+EG +K++ D G+
Sbjct: 461 AHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQEQLILIEGKSKRS-DAHWFGR 519
Query: 516 SDRGHRV 522
+D +V
Sbjct: 520 NDANIKV 526
>gi|157132304|ref|XP_001655989.1| radical sam proteins [Aedes aegypti]
gi|108881684|gb|EAT45909.1| AAEL002837-PA [Aedes aegypti]
Length = 573
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/490 (51%), Positives = 342/490 (69%), Gaps = 14/490 (2%)
Query: 35 LPDGPGLHHFIAQSSLTAS-QPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVND 92
L DGP F+ Q S T + + + + ++ + Q R ++ E YGCQMN ND
Sbjct: 40 LRDGPSFQDFLHQQSTTTTVGDVHQVERSVDIPYLPRESLLGQKRKVFFEIYGCQMNTND 99
Query: 93 MEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVA 152
EIV SI+K+ + N+ ++A+V+ + TCAIRD AE +W RL + +K
Sbjct: 100 TEIVWSILKSHDFQRTGNI-KDADVVLLMTCAIRDGAESTIWNRLKHIRLMK-------- 150
Query: 153 TGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 212
G+ P +I VLGCMAERLK ++++ ++ VDVV GPD+Y+DLPRLL GQK IN
Sbjct: 151 -GKRDEAKPLQIGVLGCMAERLKKQLVEKEQAVDVVAGPDSYKDLPRLLAVGQSGQKAIN 209
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
+LSL+ETYAD+ PV++ + S TA+VS+MRGC+NMCS+CIVPFTRGRERSRP+ SI KE
Sbjct: 210 VMLSLDETYADVMPVKLDRKSRTAYVSIMRGCDNMCSYCIVPFTRGRERSRPISSIRKEA 269
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLL 332
L +G+KE+TLLGQNVNSY DTS ++ E A+ L+ GF ++ K K GLRFA+LL
Sbjct: 270 LNLQDKGIKEITLLGQNVNSYRDTSECSEDTEKQASI-LAPGFKTVYKTKIGGLRFAELL 328
Query: 333 DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYT 392
L++ PEMR R+TSPHPKDFP+ +L + PN+C +HLPAQ+G+S+VLERMRRGYT
Sbjct: 329 MDLAVTVPEMRIRFTSPHPKDFPNAVLETIAKYPNICNSLHLPAQSGSSSVLERMRRGYT 388
Query: 393 REAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRE 452
REAYL+L+ ++R +IPDV LSSDFICGFCGET+EE ++T++L++ V Y A++FAYSMRE
Sbjct: 389 REAYLNLIDEVRSLIPDVTLSSDFICGFCGETDEEFSETISLIRQVKYHTAFLFAYSMRE 448
Query: 453 RTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+T AHR Y DDVPEE KQ+RL E+I AFR Q VG +LVLVEG +K++ D +L
Sbjct: 449 KTTAHRRYEDDVPEEKKQQRLREMIAAFRAGAEQLNRQFVGREELVLVEGLSKRSKD-DL 507
Query: 513 VGKSDRGHRV 522
G++D +V
Sbjct: 508 SGRNDGNIKV 517
>gi|195107983|ref|XP_001998572.1| GI23564 [Drosophila mojavensis]
gi|193915166|gb|EDW14033.1| GI23564 [Drosophila mojavensis]
Length = 588
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/490 (52%), Positives = 342/490 (69%), Gaps = 20/490 (4%)
Query: 38 GPGLHHFI---AQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDM 93
GPGL F AQ L + A ++E+ + + GR ++ E YGCQMN ND
Sbjct: 60 GPGLRDFFTVKAQRKLREEE--TSDAVSNEIPYLNAIDFNGHGRRVHFEVYGCQMNTNDT 117
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
E+V SI+K GY +V N++V+ + TCA+R+ AE K+W RL + LK +
Sbjct: 118 EVVWSILKEHGYQRSEDVA-NSDVVMLVTCAVREGAEQKIWNRLRHLRALKEK------- 169
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEV-DYGQKGIN 212
R + P ++ +LGCMAERLK+K+L+ ++ VDV+ GPD+Y+DLPRLL YG IN
Sbjct: 170 -RGSKRAPLQLTILGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAVARHYGNSAIN 228
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LLSL+ETYAD+ PVR++ +S TAFVS+MRGC+NMC++CIVPFTRGRERSRP++SIV EV
Sbjct: 229 VLLSLDETYADVMPVRLNSHSPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLDSIVHEV 288
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLL 332
L ++GVKEVTLLGQNVNSY D + E + N + GF+++ K K GL F+ LL
Sbjct: 289 RTLQEQGVKEVTLLGQNVNSYRDRTS-ENSTKAAGN--TAPGFSTVYKPKTGGLPFSVLL 345
Query: 333 DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYT 392
++ PEMR R+TSPHPKDF DE+L ++RD PNVCK +HLPAQ+GNSAVL RMRRGYT
Sbjct: 346 QSVAEAVPEMRIRFTSPHPKDFSDEVLRVIRDYPNVCKQLHLPAQSGNSAVLARMRRGYT 405
Query: 393 REAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRE 452
REAYL LV+ IRQI+P+VGLSSDFICGFCGETE E DT++L++ V Y++A++FAYSMRE
Sbjct: 406 REAYLQLVEHIRQILPNVGLSSDFICGFCGETEAEFEDTISLIEIVQYNVAFLFAYSMRE 465
Query: 453 RTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+T AHR VDDVP VK RL +++AFRE + + G QL+L+EG +K++ D+
Sbjct: 466 KTTAHRRCVDDVPTAVKTDRLKRMVQAFREGATKLHKRFEGQEQLILIEGKSKRS-DSHW 524
Query: 513 VGKSDRGHRV 522
G++D +V
Sbjct: 525 FGRNDANIKV 534
>gi|195143761|ref|XP_002012866.1| GL23830 [Drosophila persimilis]
gi|194101809|gb|EDW23852.1| GL23830 [Drosophila persimilis]
Length = 589
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/490 (51%), Positives = 336/490 (68%), Gaps = 20/490 (4%)
Query: 38 GPGLHHFIA---QSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDM 93
GPGL F S L S+ + V + GR ++ E YGCQMN ND
Sbjct: 55 GPGLQDFFTVKPASKLKLSEAAELDGVETSVPYLNAIDFQGHGRKVHFEVYGCQMNTNDT 114
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
E+V SI+K GY V E+A+++ + TCA+R+ AE K+W RL + +K++
Sbjct: 115 EVVWSILKQHGYERCQEV-EDADLVMLVTCAVREGAEQKIWNRLRHLRAMKQK------- 166
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGIN 212
R + P ++ +LGCMAERLK+++LD ++ VDV+ GPD+Y+DLPRLL YG IN
Sbjct: 167 -RGAKRQPLQLTLLGCMAERLKERLLDQEQCVDVIAGPDSYKDLPRLLAVSRHYGNSAIN 225
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LLSL+ETYAD+ PVR++ +S TAFVS+MRGC+NMC++CIVPFTRGRERSRP+ SIV EV
Sbjct: 226 VLLSLDETYADVMPVRLNSDSPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLASIVNEV 285
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLL 332
L ++GVKEVTLLGQNVNSY D + ++ L GF ++ K K G+ F++LL
Sbjct: 286 QALQEQGVKEVTLLGQNVNSYRDKGAGQT-----SDTSLVPGFKTVYKPKTGGIPFSELL 340
Query: 333 DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYT 392
++ PEMR R+TSPHPKDF DE+L ++RD PNVCK +HLPAQ+GN+ VL RMRRGYT
Sbjct: 341 QSVAEAVPEMRIRFTSPHPKDFSDEVLRVIRDYPNVCKQLHLPAQSGNTEVLARMRRGYT 400
Query: 393 REAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRE 452
REAYL+LV+ IR+I+P VGLSSDFICGFCGETE E DT++L+ V Y++AY+FAYSMRE
Sbjct: 401 REAYLELVEHIREILPTVGLSSDFICGFCGETEAEFEDTISLINRVQYNVAYLFAYSMRE 460
Query: 453 RTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+T AHR YVDDVP VK RL +++AFRE Q + + G QL+L+EG +K++ D
Sbjct: 461 KTTAHRRYVDDVPVAVKTARLQRMVQAFREGATQLHKNFEGKQQLILIEGKSKRS-DAHW 519
Query: 513 VGKSDRGHRV 522
G++D +V
Sbjct: 520 FGRNDANIKV 529
>gi|4929773|gb|AAD34147.1|AF152097_1 CGI-05 protein [Homo sapiens]
Length = 554
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/507 (51%), Positives = 344/507 (67%), Gaps = 34/507 (6%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 20 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGR----QRKVYLETYGCQMNVN 75
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY + V A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 76 DTEIAWSILQKSGY--LRPVTSRADVILLVTCSIREKAEQTIWNRLHQLKALK------- 126
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 127 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 185
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 186 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 245
Query: 272 VDELWKE--------------GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
V +L ++ G+KEVTLLGQNVNS+ D S E + LS GF +
Sbjct: 246 VKKLSEQVFLPPRPPKVLGLQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGFTT 303
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ
Sbjct: 304 NYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQ 363
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S VLE MRRGY+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++
Sbjct: 364 SGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLRE 423
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG QL
Sbjct: 424 VQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQL 483
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ T+L G++D +V F
Sbjct: 484 VLVEGLSKRSA-TDLCGRNDGNLKVIF 509
>gi|194740916|ref|XP_001952936.1| GF17521 [Drosophila ananassae]
gi|190625995|gb|EDV41519.1| GF17521 [Drosophila ananassae]
Length = 577
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/487 (51%), Positives = 340/487 (69%), Gaps = 15/487 (3%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIV 96
GPGL F A ++ +P + V + H QGR ++ E +GCQMN ND E+V
Sbjct: 54 GPGLQDFFAAKPVSRFKPEEGELVDTSVPYLKPIDFHGQGRKVHFEVFGCQMNTNDTEVV 113
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRS 156
S+++ GY+ + PE+A++I + TCA+RD AE ++W RL + +K + RS
Sbjct: 114 WSVLRENGYARCQD-PEDADIIMLVTCAVRDGAEQRIWNRLKHLRAMK--------SKRS 164
Query: 157 QSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGINTLL 215
+HP ++ VLGCMAERLK+K+L+ ++ VDV+ GPD+Y+DLPRLL YG IN LL
Sbjct: 165 PRRHPLQLSVLGCMAERLKEKLLEKEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLL 224
Query: 216 SLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDEL 275
SL+ETYAD+ PVR++ S TA+VS+MRGC+NMC++CIVPFTRGRERSRP+ESI+ EV L
Sbjct: 225 SLDETYADVMPVRLNSESPTAYVSIMRGCDNMCTYCIVPFTRGRERSRPLESILTEVRAL 284
Query: 276 WKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL 335
++GVKEVTLLGQNVNSY D G +E +P N GF ++ K K G+ F+ LL +
Sbjct: 285 QEQGVKEVTLLGQNVNSYRD-GGTSQEKDP--NSVPVPGFKTVYKPKSGGITFSRLLRSV 341
Query: 336 SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREA 395
+ PEMR R+TSPHPKDF D++L ++RD PNVCK +HLPAQ+GN+ VLERMRRGY+REA
Sbjct: 342 AEAVPEMRIRFTSPHPKDFSDDVLRVIRDYPNVCKQLHLPAQSGNTKVLERMRRGYSREA 401
Query: 396 YLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTH 455
YL LV +IR +P+VGLSSDFICGFCGETEEE DT++L++ V Y++AY+FAYSMRE+T
Sbjct: 402 YLHLVDRIRLFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTT 461
Query: 456 AHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGK 515
AHR + DDVP VK RL ++E FR + + G QL+L+EG +K++ + G+
Sbjct: 462 AHRRFKDDVPLLVKNERLKRMVEVFRAGATELHKKMEGHEQLILIEGKSKRSA-SHWFGR 520
Query: 516 SDRGHRV 522
+D +V
Sbjct: 521 NDANIKV 527
>gi|260789490|ref|XP_002589779.1| hypothetical protein BRAFLDRAFT_125887 [Branchiostoma floridae]
gi|229274962|gb|EEN45790.1| hypothetical protein BRAFLDRAFT_125887 [Branchiostoma floridae]
Length = 514
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/454 (54%), Positives = 332/454 (73%), Gaps = 21/454 (4%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV+D EI S++K++GY +V +A+VI TCAIR+ AE K+W RL
Sbjct: 7 KVYFETYGCQMNVSDTEIAWSVLKDSGYQRTESV-NDADVILAVTCAIRENAEQKIWTRL 65
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLG---------CMAERLKDKILDADKMVDVV 188
F +K T R++S+ P K+ VLG CMAERLK +L+ +K VD++
Sbjct: 66 QEFRAMK--------TRRNKSR-PLKVGVLGKENCVDILRCMAERLKKDLLEREKSVDLI 116
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
GPDAYRDLPRLL + GQ+ N +LSL+ETYAD+ PVR++ + TAFVS+MRGC+NMC
Sbjct: 117 AGPDAYRDLPRLLSVTESGQQAANVVLSLDETYADVMPVRMNAGAPTAFVSIMRGCDNMC 176
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
S+CIVPFTRGRERSRP++SI++EV L +GVKEVTLLGQNVNSY D S + ++
Sbjct: 177 SYCIVPFTRGRERSRPIKSILEEVRALSGQGVKEVTLLGQNVNSYRDMSEQQHQLADSPT 236
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
LS GF ++ + KK GLRF+ LLDR++ PEMR R+ SPHPKDFPDE+L ++RDRPN+
Sbjct: 237 -NLSAGFGTIYRKKKGGLRFSALLDRVAQVDPEMRIRFVSPHPKDFPDEVLQLIRDRPNI 295
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C ++HLPAQ+G+S VL+ MRR +TREAYL+LVQ ++++IPDV LSSDFI GFCGETE++H
Sbjct: 296 CNHLHLPAQSGSSQVLQSMRRNHTREAYLELVQHVKKVIPDVSLSSDFIVGFCGETEDDH 355
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
TL+L + V YD AY+FAYSMR++THA+ +DDVP +VKQRRL ELI R+ +
Sbjct: 356 NQTLSLARLVRYDNAYLFAYSMRKKTHAYHKLMDDVPADVKQRRLAELINVCRQGMAEAN 415
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
++G V LVLVEG +KK+ ++L G++D +V
Sbjct: 416 AEKIGQVHLVLVEGVSKKSA-SDLAGRNDGNTKV 448
>gi|332019786|gb|EGI60247.1| CDK5RAP1-like protein [Acromyrmex echinatior]
Length = 544
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/488 (51%), Positives = 340/488 (69%), Gaps = 21/488 (4%)
Query: 37 DGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIV 96
DG L F++ S + + P V + G ++Y E +GCQMNVND +IV
Sbjct: 26 DGLSLKDFLSPSVID----IPSEKPVPYVQNIRGE----NQKVYFEIFGCQMNVNDADIV 77
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRS 156
SI+K+ GY ++A+++ + TC+IRD AE KVW +L ++ + K+
Sbjct: 78 WSILKSHGYKHT-ECLDDADIVLLVTCSIRDNAEQKVWHKLENLNGVRNKKKRT------ 130
Query: 157 QSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLS 216
+K P KI GCMAERLK KILD K+VDV+ GPD+Y+DLPRLL D + IN LLS
Sbjct: 131 -TKLPMKI---GCMAERLKTKILDRGKLVDVIAGPDSYKDLPRLLAVTD-DETAINVLLS 185
Query: 217 LEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELW 276
+ETYAD++PVR++++S A+VS+MRGC+NMC++CIVPFTRGRERSRP+ SI+ EV +L
Sbjct: 186 FDETYADVTPVRLNQDSTEAYVSIMRGCDNMCTYCIVPFTRGRERSRPIASILDEVRQLS 245
Query: 277 KEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLS 336
+GVKE+TLLGQNVNSY D S E + P +L++GF ++ K KK GLRF+DLLD++S
Sbjct: 246 DQGVKEITLLGQNVNSYRDLSKSEFILSPNMETQLAKGFKTVYKNKKGGLRFSDLLDKVS 305
Query: 337 LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAY 396
L PE+R R+TSPHPKDFPDE+L+++ +RPN+CK IHLPAQ+GNS +LERMRRGYTREAY
Sbjct: 306 LINPEIRIRFTSPHPKDFPDEVLHLIAERPNICKQIHLPAQSGNSVILERMRRGYTREAY 365
Query: 397 LDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHA 456
LDLV IR I+PDV +SSDFI GFC ETEE+ DTL+L++ V Y+ A++FAYSMRE+T A
Sbjct: 366 LDLVYHIRNILPDVYISSDFIAGFCSETEEQFQDTLSLIEEVKYNNAFLFAYSMREKTTA 425
Query: 457 HRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
HR Y DDV K R+ +I +R+ + +Q+G QLVLVE +K++ D +L G++
Sbjct: 426 HRRYKDDVETHTKTERMNRMIALYRKEVEKLNKAQIGQHQLVLVERTSKRS-DQQLQGRN 484
Query: 517 DRGHRVAF 524
D RV
Sbjct: 485 DGNVRVIL 492
>gi|198450948|ref|XP_001358190.2| GA19527 [Drosophila pseudoobscura pseudoobscura]
gi|198131266|gb|EAL27327.2| GA19527 [Drosophila pseudoobscura pseudoobscura]
Length = 589
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 250/490 (51%), Positives = 335/490 (68%), Gaps = 20/490 (4%)
Query: 38 GPGLHHFIA---QSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDM 93
GPGL F S L S+ + V + GR ++ E YGCQMN ND
Sbjct: 55 GPGLQDFFTVKPASKLKLSEAAELDGVETSVPYLNAIDFQGHGRKVHFEVYGCQMNTNDT 114
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
E+V SI+K GY + E+A+++ + TCA+R+ AE K+W RL + +K++
Sbjct: 115 EVVWSILKQHGYERCQEL-EDADLVMLVTCAVREGAEQKIWNRLRHLRAMKQK------- 166
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGIN 212
R + P ++ +LGCMAERLK+++LD ++ VDV+ GPD+Y+DLPRLL YG IN
Sbjct: 167 -RGAKRQPLQLTLLGCMAERLKERLLDQEQCVDVIAGPDSYKDLPRLLAVSRHYGNSAIN 225
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LLSL+ETYAD+ PVR++ +S TAFVS+MRGC+NMC++CIVPFTRGRERSRP+ SIV EV
Sbjct: 226 VLLSLDETYADVMPVRLNSDSPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLASIVNEV 285
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLL 332
L +GVKEVTLLGQNVNSY D + ++ L GF ++ K K G+ F++LL
Sbjct: 286 RALQVQGVKEVTLLGQNVNSYRDKGAGQT-----SDTSLVPGFKTVYKPKTGGIPFSELL 340
Query: 333 DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYT 392
++ PEMR R+TSPHPKDF DE+L ++RD PNVCK +HLPAQ+GN+ VL RMRRGYT
Sbjct: 341 QSVAEAVPEMRIRFTSPHPKDFSDEVLRVIRDYPNVCKQLHLPAQSGNTEVLARMRRGYT 400
Query: 393 REAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRE 452
REAYL+LV+ IR+I+P VGLSSDFICGFCGETE E DT++L+ V Y++AY+FAYSMRE
Sbjct: 401 REAYLELVEHIREILPTVGLSSDFICGFCGETEAEFEDTISLINTVQYNVAYLFAYSMRE 460
Query: 453 RTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+T AHR YVDDVP VK RL +++AFR+ Q + + G QL+L+EG +K++ D
Sbjct: 461 KTTAHRRYVDDVPVAVKTARLQRMVQAFRDGATQLHKNFEGKQQLILIEGKSKRS-DAHW 519
Query: 513 VGKSDRGHRV 522
G++D +V
Sbjct: 520 FGRNDANIKV 529
>gi|47227354|emb|CAF96903.1| unnamed protein product [Tetraodon nigroviridis]
Length = 522
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/502 (50%), Positives = 346/502 (68%), Gaps = 26/502 (5%)
Query: 35 LPDGPGLHHFI--AQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVND 92
+ GP FI A+ + T+ + + P + S ++ + ++Y ETYGCQMNVND
Sbjct: 14 ISSGPTFQEFIKGAKMTKTSDENVEYHGPHTYFSDDL--DMGNFRKVYFETYGCQMNVND 71
Query: 93 MEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVA 152
EI SI++ GY ++ + A+V+ + TC+IR+ AE +W RL +KR
Sbjct: 72 TEIAWSILQKKGYQRTFDLSQ-ADVVLLVTCSIREKAEQTIWNRLQQLTAMKRR------ 124
Query: 153 TGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 212
R +S+ P KI +LGCMAERLK ++L+ +K+VD++ GPDAYRDLPRLL D GQ+ N
Sbjct: 125 --RLKSQTPMKIGILGCMAERLKTELLEREKLVDILAGPDAYRDLPRLLAVADGGQQASN 182
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LLSLEETYADI PV + + +A+VS+MRGC+NMC++CIVPFTRGRERSRPV SI++EV
Sbjct: 183 VLLSLEETYADIMPVHHAPQAYSAYVSIMRGCDNMCTYCIVPFTRGRERSRPVRSILEEV 242
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLL 332
+L +GVKEVTLLGQNVNSY DTS ++ +LS GF ++ + K+ GLRF+DLL
Sbjct: 243 SQLSDQGVKEVTLLGQNVNSYRDTS--HEQFGGTELTQLSRGFQTVYRTKQGGLRFSDLL 300
Query: 333 DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYT 392
D++S P+MR R+TSPHPKDFPDE+L ++ +R N+C+ IHLPAQ+G+S +L+ MRRGYT
Sbjct: 301 DQVSRIDPDMRIRFTSPHPKDFPDEVLQLIAERKNICQQIHLPAQSGSSKILKAMRRGYT 360
Query: 393 REAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRE 452
REAYLDLV+ I++IIP V LSSDFI GFCGE EE+H TL+L++ VGY++ ++FAYSMR+
Sbjct: 361 REAYLDLVKNIKKIIPGVSLSSDFISGFCGEKEEDHQQTLSLIREVGYNVGFLFAYSMRK 420
Query: 453 RTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEG---------- 502
+T A DDVP EVK+RRL E I FRE + + V + QLVLVEG
Sbjct: 421 KTQAFHRLQDDVPAEVKRRRLEECIGVFREEAARVNGALVRSTQLVLVEGVSLPFLANKD 480
Query: 503 PNKKAPDTELVGKSDRGHRVAF 524
+K++ D +L G++D RV F
Sbjct: 481 QSKRSAD-DLCGRTDGNMRVVF 501
>gi|327289365|ref|XP_003229395.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Anolis carolinensis]
Length = 591
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/494 (51%), Positives = 342/494 (69%), Gaps = 17/494 (3%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLADLAPASEVSSAT----GSEVHSQGRIYQETYGCQMNV 90
L GP L F+ Q + Q L +E +SA+ + S G++Y ETYGCQMNV
Sbjct: 59 LATGPSLQQFL-QGAAPPVQGAHHLPTGAEETSASYLDPNTFTGSPGKVYLETYGCQMNV 117
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ +GY + E A+VI + TC+IR+ AE +W RL + K
Sbjct: 118 NDTEIAWSILQRSGYQRTTRL-EEADVILLVTCSIREKAEQTIWNRLKH--------LKT 168
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
+ R S+ +I +LGCMAERLK+KILD +++VDVV GPD+YRDLPRLL + GQ+
Sbjct: 169 LKLKRPASQGALRIGILGCMAERLKEKILDRERLVDVVAGPDSYRDLPRLLTVAESGQQA 228
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSLEETYADI PV+ + +S +AFVS+MRGC+NMC++CIVPFTRGRERSRP+ SI++
Sbjct: 229 ANVLLSLEETYADILPVQTNPSSTSAFVSIMRGCDNMCTYCIVPFTRGRERSRPIVSILQ 288
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV L +GVKEVTLLGQNVNSY D S E + A LS GF+++ + K+ GLRFA+
Sbjct: 289 EVQMLSDQGVKEVTLLGQNVNSYRDVS--EVQFLSSAPSHLSRGFSTVYRPKQGGLRFAE 346
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLDR+S+ PEMR R+TSPHPKDFPDE+ +M++R N+CK +HLP Q+G+S +LE MRRG
Sbjct: 347 LLDRVSVIDPEMRIRFTSPHPKDFPDEVFQLMKERHNICKQLHLPVQSGSSRILEAMRRG 406
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
YTREAYL+LV +R +P V L SD I GFCGETE +H T++L++ VGY A++FAYS
Sbjct: 407 YTREAYLELVHHVRDSLPGVTLGSDIIAGFCGETEADHQQTVSLVQEVGYRTAFIFAYSE 466
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R++T A DDVP +VK+RR+ EL + FRE + + VG +Q+VLVEGP+K++
Sbjct: 467 RQKTRAFHRLKDDVPLDVKRRRVKELTDVFREGASKANAAAVGQMQVVLVEGPSKRSA-L 525
Query: 511 ELVGKSDRGHRVAF 524
EL G++D +V F
Sbjct: 526 ELSGRNDGNIKVIF 539
>gi|118402077|ref|XP_001033358.1| RNA modification enzyme, MiaB family [Tetrahymena thermophila]
gi|89287706|gb|EAR85695.1| RNA modification enzyme, MiaB family [Tetrahymena thermophila
SB210]
Length = 604
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/524 (49%), Positives = 353/524 (67%), Gaps = 44/524 (8%)
Query: 16 LKRSFSLNLSRNFSHSSLDLPDGPGLHHFIAQSSLTASQPL--ADLAPASEVSSATGSEV 73
LK+ FS + DL D P L F+ Q +P+ +DL +++ ++
Sbjct: 25 LKKYFS-------TQQKADLKDIPMLDEFMKQQR----EPIKESDLE-ETQIPYLNKTQF 72
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
SQ + + ETYGCQMN +D EI+ I++ AG+ N+ +NA+++F+NTCAIR+ AE+K+
Sbjct: 73 DSQKKYFIETYGCQMNESDTEIISGILQKAGFVRESNL-DNADIVFLNTCAIREGAENKI 131
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDA 193
W+RL KR+ KK + TG VLGCMAERLKDK+++ +K+VD++ GPDA
Sbjct: 132 WKRLENIRAYKRKEKKQLITG-----------VLGCMAERLKDKLVEKNKVVDIIVGPDA 180
Query: 194 YRDLPRLLEEVDYGQK--GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
YRDLPRL++ +D IN LSLEETYADI PVR + +S AFVS+MRGCNNMCSFC
Sbjct: 181 YRDLPRLIQSLDPSTDDYSINVQLSLEETYADIVPVRQNPDSCQAFVSIMRGCNNMCSFC 240
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVPFTRGRERSR ++SIV+EV L +GVKE+TLLGQNVNSY D E E +
Sbjct: 241 IVPFTRGRERSRDIQSIVEEVKMLANQGVKEITLLGQNVNSYFDK---EAEGYEDLDHLN 297
Query: 312 SEGFNSMCKVKKM-----------GLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
SEGF K++K+ G RFA LL+ ++ PE+RFR+TSPHPKDFPD +L
Sbjct: 298 SEGFKETFKLRKVIRALLNSLLGKGARFAHLLEEVAKAAPEVRFRFTSPHPKDFPDPVLQ 357
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
+++ PN+ K +H+PAQ+GN+ +L RMRR Y+RE Y++LV I+Q IP + LSSDFICGF
Sbjct: 358 VIKKYPNIAKNLHMPAQSGNTEMLTRMRRNYSRENYINLVDHIKQTIPGITLSSDFICGF 417
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGET++E DTLTL++ V Y+ A++FAYS+RE+THAHR+Y DDVPEEVK++RL ++I+ F
Sbjct: 418 CGETDQEFQDTLTLLEYVKYENAFLFAYSLREKTHAHRHYQDDVPEEVKKQRLQQMIDVF 477
Query: 481 RESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++ +VG + LVLVEG K + ++ G++D RV F
Sbjct: 478 HKNQELVNKQEVGRIHLVLVEGKGK--FENQIRGRTDTNKRVIF 519
>gi|156538649|ref|XP_001607691.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Nasonia vitripennis]
Length = 660
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 247/496 (49%), Positives = 345/496 (69%), Gaps = 29/496 (5%)
Query: 34 DLPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
+L +GPGL HF+++ S + S+ + L+P ++Y E YGCQMNV
Sbjct: 127 NLTNGPGLGHFLSKPSHRSEVESEKIPYLSPLDG----------DLQKVYLEVYGCQMNV 176
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND E+V +I+K Y ++ + A VI + TCAIR+ AE+KVW +L F LK
Sbjct: 177 NDTEVVSAILKKHNYKITKDIMD-ANVILLVTCAIRENAENKVWNKLKQFRILK------ 229
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
+ K KI +LGCMAERLK KI++ +K+VD++ GPD+Y+DLPRLL + +
Sbjct: 230 ------ERKVVSKIGLLGCMAERLKHKIIEKEKIVDIIAGPDSYKDLPRLLAISNEHETA 283
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
IN LSL+ETYAD++PVR++ +S A+VS+MRGC+NMC++CIVPFTRGRERSRP+ SI+
Sbjct: 284 INVALSLDETYADVTPVRLNPDSKAAYVSIMRGCDNMCTYCIVPFTRGRERSRPISSILD 343
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGME--KEVEPGANWRLSEGFNSMCKVKKMGLRF 328
EV +L +G+KEVTLLGQNVNSY D S + + L +GFN++ K K GLRF
Sbjct: 344 EVQQLSDQGIKEVTLLGQNVNSYRDISESKYYTSADTPQKTNLVKGFNTVYKTKLGGLRF 403
Query: 329 ADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMR 388
+ LLD++SL PEMR R+TSPHPKDFPDE+++++ +RPN+CK IHLPAQ+G++ VL RMR
Sbjct: 404 SHLLDKVSLINPEMRIRFTSPHPKDFPDEVIHLIAERPNICKQIHLPAQSGSTDVLTRMR 463
Query: 389 RGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAY 448
RGY+REAYLDLV IR IIPD+ +SSDFI GFC ETE+E +TLTL++ V Y A++FAY
Sbjct: 464 RGYSREAYLDLVYHIRNIIPDIAISSDFIAGFCNETEKEFEETLTLIEEVKYTTAFLFAY 523
Query: 449 SMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAP 508
SMRE+T A+R Y D+V +++K +RL ++I+ +R + Y + +G QLVLVEG +K++
Sbjct: 524 SMREKTTAYRRYSDNVDKKIKIQRLQKMIKLYRTEVERLYKNSIGKQQLVLVEGESKRSV 583
Query: 509 DTELVGKSDRGHRVAF 524
+L G++D +V F
Sbjct: 584 -KDLQGRNDGNVKVIF 598
>gi|170040301|ref|XP_001847942.1| CDK5 regulatory subunit-associated protein 1 [Culex
quinquefasciatus]
gi|167863869|gb|EDS27252.1| CDK5 regulatory subunit-associated protein 1 [Culex
quinquefasciatus]
Length = 579
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/489 (51%), Positives = 340/489 (69%), Gaps = 21/489 (4%)
Query: 34 DLPDGPGLHHFIAQSSLTAS-----QPLADLAPASEVSSATGSEVHSQGRIYQETYGCQM 88
DL GPGL FI+ S+ + Q D+ P S G + +++ E YGCQM
Sbjct: 34 DLQSGPGLQDFISASASSTGHVHQVQHPRDIPPYLSRESLLGQ----RRKVFFEVYGCQM 89
Query: 89 NVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWK 148
N ND EIV SI+K Y ++ ++A+V+ + TCAIRD AE VW RL + +K +
Sbjct: 90 NTNDTEIVWSILKGHEYQRTGSI-KDADVVLLMTCAIRDGAESTVWNRLKHVRLMK---E 145
Query: 149 KNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQ 208
+ + GR+ ++ VLGCMAERLK ++++ + VDVV GPD+Y+DLPRLL GQ
Sbjct: 146 RRESEGRAL-----QVGVLGCMAERLKRQLVEKEGSVDVVAGPDSYKDLPRLLAVGQKGQ 200
Query: 209 KGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESI 268
K IN LLSL+ETYAD+ PV++ + S TA+VS+MRGC+NMCS+CIVPFTRG+ERSRPV SI
Sbjct: 201 KAINVLLSLDETYADVMPVKLDRKSRTAYVSIMRGCDNMCSYCIVPFTRGKERSRPVASI 260
Query: 269 VKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRF 328
E L +G+KE+TLLGQNVNSY D S E + E A+ L+ GF ++ K K GLRF
Sbjct: 261 RDEALHLEAKGIKEITLLGQNVNSYRDLS-TESDGEKQASV-LAPGFKTVYKTKVGGLRF 318
Query: 329 ADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMR 388
A+LL L+ PEMR R+TSPHPKDFP E+L + PN+CK +HLPAQ+G+S VLERMR
Sbjct: 319 AELLTELAEIVPEMRIRFTSPHPKDFPREVLETIARYPNICKSLHLPAQSGSSTVLERMR 378
Query: 389 RGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAY 448
RGYTREAYL+LV ++R I+P+V LSSDFICGFCGET+ E A+TL+L++ VGY A++FAY
Sbjct: 379 RGYTREAYLNLVDEVRTIVPNVTLSSDFICGFCGETDAEFAETLSLIEQVGYHTAFLFAY 438
Query: 449 SMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAP 508
SMRE+T AHR + DDVP +KQ+RL ++I+ FR + VG +L+LVEG +K++P
Sbjct: 439 SMREKTTAHRRFTDDVPNPIKQQRLRDMIKVFRAGAERLNAQFVGREELILVEGASKRSP 498
Query: 509 DTELVGKSD 517
+ +L G++D
Sbjct: 499 N-DLAGRND 506
>gi|326430372|gb|EGD75942.1| CDK5 regulatory subunit-associated protein 1 [Salpingoeca sp. ATCC
50818]
Length = 632
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/440 (55%), Positives = 318/440 (72%), Gaps = 13/440 (2%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R+ +TYGCQMNVND E+ SI+K AG + +V E A+++ + TCAIR+ AE KVW +L
Sbjct: 124 RVLIQTYGCQMNVNDSELAWSILKEAGCEKATDV-EEADIVLLVTCAIRENAETKVWTKL 182
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR+ K+ +I VLGCMAERLK K+++ K VD+V GPDAYR+L
Sbjct: 183 DQLSHIKRKRPKHKDL---------QIGVLGCMAERLKHKLVEESKCVDIVAGPDAYREL 233
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P +L G +N LLSLEETYAD++PVR + NS +AFVS+ RGC+NMCS+CIVPFTR
Sbjct: 234 PTMLSRAAAGDTQVNVLLSLEETYADLTPVRHNPNSPSAFVSIQRGCDNMCSYCIVPFTR 293
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSRPV +I++EV +L ++GVKEVTLLGQNVNSY D S + V A + GF +
Sbjct: 294 GRERSRPVSAILREVQQLSEQGVKEVTLLGQNVNSYLDHSQIS--VATAAPVVNTPGFKT 351
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ K KK G+ FA LL++++ PEMR R+TSPHPKDFPDE+L+++RD NVC IHLPAQ
Sbjct: 352 IYKRKKDGITFAQLLEQVAQVDPEMRIRFTSPHPKDFPDEVLHVIRDHHNVCNQIHLPAQ 411
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ AVL+RMRRGYT AY +LV +I +IPDV LSSDFI GFCGETE +H DTL L++
Sbjct: 412 SGSDAVLDRMRRGYTHAAYCELVDRIHDLIPDVTLSSDFISGFCGETEADHLDTLRLLEY 471
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V YDMAY+FAYS+RE+THAHR DDVPE+VK RL +LI+ F + + G+VQ
Sbjct: 472 VKYDMAYLFAYSLREKTHAHRRLQDDVPEDVKLARLNDLIQLFHKHAKNNNAQRHGSVQT 531
Query: 498 VLVEGPNKKAPDTELVGKSD 517
VL+E +K++ D ELVG+SD
Sbjct: 532 VLIESASKRSED-ELVGRSD 550
>gi|328872998|gb|EGG21365.1| hypothetical protein DFA_01246 [Dictyostelium fasciculatum]
Length = 636
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/505 (50%), Positives = 343/505 (67%), Gaps = 39/505 (7%)
Query: 39 PGLHHFIAQSSLTA----------SQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQ 87
P L+ F+ Q T SQPL D P ++ TG GR ++ E+YGCQ
Sbjct: 89 PSLNQFMKQHIDTVTGGVVDGDSLSQPLVD--PFLLTANTTGD-----GRSVFVESYGCQ 141
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN D E++ ++MK +GY + + ++A+VIF+NTCAIR+ AE K+W RL E
Sbjct: 142 MNFADTEVIYAVMKQSGYI-IADSAKSADVIFLNTCAIRENAEDKIWFRLT-------EL 193
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
+K RSQ + I VLGCMAERLK K+LD+ VD+V GPDAYR LP LL ++ G
Sbjct: 194 RKQKRVKRSQGGNMV-IGVLGCMAERLKQKLLDSKNSVDLVVGPDAYRSLPALLGRIEDG 252
Query: 208 QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVES 267
Q IN +LS +ETYADI+PVR N + A+VS+MRGCNNMCS+CIVPFTRGRERSRP+ES
Sbjct: 253 QTAINVMLSADETYADIAPVRHDSNGLCAYVSIMRGCNNMCSYCIVPFTRGRERSRPLES 312
Query: 268 IVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKE-----VEPGAN------WRLSEGFN 316
I+ EV +L K G KE+TLLGQNVNSYN G++ E VE N + EGFN
Sbjct: 313 ILDEVKQLSKTGYKEITLLGQNVNSYNYIPGVDAETSSEQVEQKDNKMEKEKLQPREGFN 372
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
++ K K G+ F +L+D +SL PEMR R+TSPHPKDFPD L+ +++ RPN+C+ H+PA
Sbjct: 373 TIYKSPKKGITFTELMDAVSLVDPEMRVRFTSPHPKDFPDSLIELVKVRPNICRQFHIPA 432
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+GNS VLERMRRGYTRE+Y++L+ I++ +PD +SSDFI GFCGETE+EH DT++LM+
Sbjct: 433 QSGNSDVLERMRRGYTRESYIELIDLIKRELPDCSISSDFISGFCGETEQEHRDTISLME 492
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGY+ AYMFAYS+RE+THAHR+ DDV E+VK RRL E+I+ + + + ++G
Sbjct: 493 YVGYENAYMFAYSLREKTHAHRSMKDDVTEDVKARRLKEVIDTYYKCIREKSKDELGKKH 552
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHR 521
LVLVE ++++ D VG++D +
Sbjct: 553 LVLVERQSRRSGD-HFVGRTDSNKK 576
>gi|357613258|gb|EHJ68404.1| hypothetical protein KGM_07708 [Danaus plexippus]
Length = 491
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/430 (54%), Positives = 324/430 (75%), Gaps = 13/430 (3%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN+ND EIV SI+K G+ E V E A+V + TCAIR+ AE K+W RL++ KR
Sbjct: 1 MNLNDTEIVWSILKKEGF-EKTEVEEEADVFLVMTCAIREGAETKIWHRLDHLRGFKR-- 57
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
++++A ++ P KI +LGCMAERLK+K+++ +K VDVV GPD+YRDLPRLL + G
Sbjct: 58 RRSLA----KNMKPIKIGILGCMAERLKEKLIEKEKAVDVVAGPDSYRDLPRLLAVTESG 113
Query: 208 QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVES 267
Q +N LLSL+ETYAD+ PVR++K SV+AF+S+MRGC+NMC++CIVPFTRGRERSRP+ S
Sbjct: 114 QTAVNVLLSLDETYADVVPVRLNKGSVSAFISIMRGCDNMCTYCIVPFTRGRERSRPISS 173
Query: 268 IVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLR 327
IV EV L + GVKEVTLLGQNVNSY D + + + +++GF ++ K KK GLR
Sbjct: 174 IVDEVKHLSESGVKEVTLLGQNVNSYRDVTQTTGKFDTS----MAKGFKTVYKNKKGGLR 229
Query: 328 FADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERM 387
FADLLD++S PEMR R+T+ HPKDFPDE+L ++ RPN+CK +HLPAQ+G+S VLERM
Sbjct: 230 FADLLDKVSAVDPEMRIRFTAAHPKDFPDEVLQVISSRPNICKSLHLPAQSGSSEVLERM 289
Query: 388 RRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFA 447
RRGYTREAYL+LV+++R+++P+VGLS+D ICGFCGETE++ +TL+LM V Y++A++F
Sbjct: 290 RRGYTREAYLELVERVREVLPNVGLSTDMICGFCGETEDQFLETLSLMDIVDYNVAFLFP 349
Query: 448 YSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKA 507
YSMRE+T A+R Y DDVPE VK+ R ++E +R + ++++G + LVLVEG K
Sbjct: 350 YSMREKTTAYRRYKDDVPEHVKRDRHRRMVELYRRKCQRMNEAEIGNIHLVLVEGTLPKT 409
Query: 508 PDTELVGKSD 517
+L+G+++
Sbjct: 410 --GQLLGRNE 417
>gi|328713992|ref|XP_003245232.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Acyrthosiphon pisum]
Length = 580
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/490 (52%), Positives = 337/490 (68%), Gaps = 21/490 (4%)
Query: 37 DGPGLHHFIAQSSLTASQPLA---DLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDM 93
DGP L FIA+ L D P + G ++Y E YGCQMNVND
Sbjct: 47 DGPSLKDFIAKDLPQEQIELVNNEDKIPYVDDMVDLGQ----NRKVYIEVYGCQMNVNDA 102
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
EIV SI++N GY + ++ E A+VI + TCAIRD AE+K+W R+ +KR W+ +
Sbjct: 103 EIVWSILQNEGYIKTNSIYE-ADVILLVTCAIRDSAENKIWTRIKQLRSVKR-WRGKL-- 158
Query: 154 GRSQSKHPPKIVVLGCMAERLKDKIL-DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 212
P KI +LGCMAERLK+K++ D+ +D+V GPD+YRDLPRLL + + GQK IN
Sbjct: 159 ------DPLKIGILGCMAERLKEKLVSDSKGAIDLVAGPDSYRDLPRLLAKTEAGQKAIN 212
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LLS +ETYA+I PV+++ ++VTA+VS+MRGC+NMC++CIVPFTRGRERSRPVESI+ E+
Sbjct: 213 VLLSFDETYAEIKPVKLNDDNVTAYVSIMRGCDNMCTYCIVPFTRGRERSRPVESILDEI 272
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLL 332
L ++G KEVTLLGQNVNSY D S P N L+ GF ++ K KK G+RFA+LL
Sbjct: 273 KYLSEKGFKEVTLLGQNVNSYRDLS-TSSFFMPSTN-TLASGFKTVYKEKKGGVRFAELL 330
Query: 333 DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYT 392
+R+S PEMR R+TSPHPKDFPDE+L I+ ++PNVCK +HLPAQ G++ VLE+MRRGYT
Sbjct: 331 NRVSDVDPEMRIRFTSPHPKDFPDEVLDIILEKPNVCKNLHLPAQCGSTEVLEKMRRGYT 390
Query: 393 REAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRE 452
RE+YL L Q IR +P V SSDFI GFCGET+EE DT++LM+ V Y A++FAYSMRE
Sbjct: 391 RESYLSLAQHIRDRLPGVTYSSDFIAGFCGETDEEFEDTISLMETVKYHNAFLFAYSMRE 450
Query: 453 RTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+T A+R Y DDVP E+K R+ ++ FR V T QL+LVEG +++ P ++L
Sbjct: 451 KTTAYRRYKDDVPHEIKVERVKKMFNVFRRDAEILNKQFVNTEQLMLVEGESRRGP-SDL 509
Query: 513 VGKSDRGHRV 522
G++D +V
Sbjct: 510 CGRTDGNIKV 519
>gi|391344798|ref|XP_003746682.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Metaseiulus occidentalis]
Length = 541
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/502 (51%), Positives = 337/502 (67%), Gaps = 27/502 (5%)
Query: 24 LSRNFSHSSLDLPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQET 83
LSRN + L +GP L FIA SS+ P + P +EV E +++ E
Sbjct: 11 LSRNCGSWTKKLAEGPSLEAFIANSSV----PRENYDP-TEVPYLI-DESAQLKKVFFEV 64
Query: 84 YGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFL 143
YGCQMNVND EIV SI+K GY V+N A V+ I TC+IR+ AE K+W+RL
Sbjct: 65 YGCQMNVNDTEIVWSILKKKGYERVLN-HNAANVVLIMTCSIREGAEQKIWRRLQDLR-- 121
Query: 144 KREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEE 203
K + ++++ G VLGCMAERLK ++L+ +K VDVV GPD+YRDLPRLLE
Sbjct: 122 KHKQRRDLQVG-----------VLGCMAERLKTQLLEKEKSVDVVAGPDSYRDLPRLLET 170
Query: 204 VDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSR 263
GQ G+N LSL+ETYAD++PVR+ + TAFVS+MRGCNNMC++CIVPFTRGRERSR
Sbjct: 171 ASGGQAGVNVQLSLDETYADVTPVRLDERRKTAFVSIMRGCNNMCTYCIVPFTRGRERSR 230
Query: 264 PVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR---LSEGFNSMCK 320
P+ SI+ EV L GVKEVTLLGQNVNSY D M +E P + L++GF S CK
Sbjct: 231 PMNSILDEVRHLSLNGVKEVTLLGQNVNSYRD---MSEESHPFIRFTDVGLAKGFKSKCK 287
Query: 321 VKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGN 380
++ GL FADLL +++ PEMR R+TSPHPKDFPDE+L ++ N+C +IHLPAQ+G+
Sbjct: 288 LRSGGLGFADLLHQVAEVDPEMRVRFTSPHPKDFPDEVLQVISSHKNICNHIHLPAQSGS 347
Query: 381 SAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGY 440
+ VL+ M RGYTRE YL LV I + +P+V L+SDFI GFCGETE+EH TL+L++ VGY
Sbjct: 348 TRVLDLMGRGYTREDYLTLVDTIYKFMPNVSLTSDFITGFCGETEDEHQMTLSLVEQVGY 407
Query: 441 DMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLV 500
Y F YS+RE+T AHR DDVP E K+RR E++E FR ++ Q+G +Q VLV
Sbjct: 408 TFCYAFPYSLREKTRAHRRLEDDVPLEDKKRRAIEILEVFRRKAKLKFEKQIGDIQTVLV 467
Query: 501 EGPNKKAPDTELVGKSDRGHRV 522
EG +K++ + EL G+++ +V
Sbjct: 468 EGESKRSTE-ELFGRNEGNTKV 488
>gi|255072327|ref|XP_002499838.1| radical SAM protein with TRAM and UPF0004 domains [Micromonas sp.
RCC299]
gi|226515100|gb|ACO61096.1| radical SAM protein with TRAM and UPF0004 domains [Micromonas sp.
RCC299]
Length = 507
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/452 (56%), Positives = 319/452 (70%), Gaps = 26/452 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R Y ETYGCQMNV+D EIV S++ + Y ++ + E+A+ I +NTCAIRD AE K+W RL
Sbjct: 4 RAYIETYGCQMNVSDSEIVASVLGASDY-DLTDTHEDADAILVNTCAIRDGAEAKIWARL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+KR+ A P + VLGCM ERLK K+L+AD + D+V GPDAYRDL
Sbjct: 63 RQLKAVKRDRDVRPA---------PVVGVLGCMGERLKGKLLEADGLADLVAGPDAYRDL 113
Query: 198 PRLLEEVDYGQK---GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
PRL++ G INT LSLEETYADI+PVR S +AFVS+MRGCNNMC+FCIVP
Sbjct: 114 PRLIDAARGGGDQGLAINTQLSLEETYADIAPVRRSDAGPSAFVSIMRGCNNMCAFCIVP 173
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTS---GMEKEVEPGANWRL 311
FTRGRERSRP SI+ EV L EG KEVTLLGQNVNSY DT E+ PG
Sbjct: 174 FTRGRERSRPRGSILDEVRRLSDEGCKEVTLLGQNVNSYADTKTSDAFERYYAPG----- 228
Query: 312 SEGFNSMCKVKKMG-LRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
F S+ K ++ G +RFA+LLD ++ PEMR R+TSPHPKDFPDE+L ++ R NV K
Sbjct: 229 ---FKSVYKPRRDGAVRFAELLDAVADVDPEMRVRFTSPHPKDFPDEVLRVIASRANVAK 285
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+H+PAQ+G+S+VLERMRRGYTREAYLDLV++ R+ I V LSSDFI GFCGETEEEHAD
Sbjct: 286 QLHMPAQSGSSSVLERMRRGYTREAYLDLVERARRDILGVALSSDFISGFCGETEEEHAD 345
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
T++LMKAVGY+ A+MFAYSMR++T A R+ DDVPE+VK+RRL E+I+A R+
Sbjct: 346 TVSLMKAVGYEKAFMFAYSMRDKTAAARHLTDDVPEDVKKRRLAEVIDAQRKGAEAANAR 405
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
++G V VLVEG +K++ D + G++ RV
Sbjct: 406 EIGRVHCVLVEGESKRS-DERMSGRTCTNKRV 436
>gi|383851609|ref|XP_003701324.1| PREDICTED: CDK5RAP1-like protein-like [Megachile rotundata]
Length = 591
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/447 (54%), Positives = 322/447 (72%), Gaps = 13/447 (2%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+IY E YGCQMNVND EI+ S++K+ GY +V + E A +I + TC+IRD AE ++W +L
Sbjct: 105 KIYFEVYGCQMNVNDTEIIWSVLKSHGYRKVEKL-EEANIILLITCSIRDNAEQRIWNKL 163
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
Y R + K KI +LGCMAERLKDKIL+ K+VD++ GPD+Y+DL
Sbjct: 164 QYL----------NGLRRKKLKSLKKIGLLGCMAERLKDKILERGKLVDIIAGPDSYKDL 213
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
PRLL V+ + IN +LS +ETYAD++PVR+ S AFVS+MRGC+NMC++CIVPFTR
Sbjct: 214 PRLLSTVE-NETAINVVLSFDETYADVTPVRLDPESTKAFVSIMRGCDNMCTYCIVPFTR 272
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSRP++SI+KEV L EGVKEVTLLGQNVNSY DTS E + A L +GF +
Sbjct: 273 GRERSRPIDSIIKEVQALSDEGVKEVTLLGQNVNSYRDTSQSEFYMSNSAETHLVKGFKT 332
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ K KK G RF DLLD++S PEMR R+TS HPKDFPDE+L+++ +RPN+CK IH+PAQ
Sbjct: 333 VYKNKKGGRRFCDLLDKVSRINPEMRIRFTSAHPKDFPDEVLHLIAERPNICKQIHVPAQ 392
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GNS VLERMRRGYTREAY++LV +IR IIP+ LSSDFI GFCGETEE+ DTL+L++
Sbjct: 393 SGNSEVLERMRRGYTREAYINLVNRIRDIIPNAYLSSDFIAGFCGETEEQFQDTLSLIEL 452
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y+ A++FAYSMRE+T AHR Y DD+ VK+ RL + ++ + QVG QL
Sbjct: 453 VKYNSAFLFAYSMREKTTAHRRYKDDIELSVKKSRLDRMNSVYKNEVQKLNKLQVGQFQL 512
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+EG +K++ D L G++D ++V
Sbjct: 513 ILIEGVSKRS-DQFLHGRNDGNNQVVI 538
>gi|145343353|ref|XP_001416312.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576537|gb|ABO94605.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 492
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/457 (52%), Positives = 321/457 (70%), Gaps = 23/457 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R+Y ETYGCQMNV+D ++V S+++ G + ++ E A +NTCA+RD AE +VW RL
Sbjct: 1 RVYIETYGCQMNVSDSDVVRSVLRAHGVATTEDLRE-ATAALVNTCAVRDNAESRVWTRL 59
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LKR+ + T + VLGCMAERLK K+L+ + + D+VCGPDAYRD+
Sbjct: 60 RQLKALKRDAGHALTT----------VGVLGCMAERLKAKLLETEDLADLVCGPDAYRDV 109
Query: 198 PRLLEEV-----DYGQKG-INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
PRLLE D ++ +N LLSL+ETYAD+ PVR S A+VSVMRGC+NMC+FC
Sbjct: 110 PRLLENSTRRLSDLSEEHRMNVLLSLDETYADVRPVRRDVGSPMAYVSVMRGCDNMCAFC 169
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDT---SGMEKEVEPGAN 308
+VPFTRGRERSRP ES+V E L EGVKE+TLLGQNVNSY D + + +P A
Sbjct: 170 VVPFTRGRERSRPFESVVDEARGLIAEGVKEITLLGQNVNSYADAPMKATTSADDDPFAA 229
Query: 309 WRLSEGFNSMCKVKKMGLR-FADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
+ ++GF S+ K K+ G R FADL+ ++ E+R R+TSPHPKDFPD+LL ++ PN
Sbjct: 230 Y--AKGFKSVYKPKREGARTFADLISAVAGLDQEVRVRFTSPHPKDFPDDLLRVIAQTPN 287
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
VCK +H+PAQ+G+++ LERMRRGYTRE YLDL+++ R++IP V LSSDFI GFCGETE+E
Sbjct: 288 VCKQLHMPAQSGSTSTLERMRRGYTREVYLDLIKRAREMIPGVALSSDFISGFCGETEDE 347
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
HA+TL+L++ V Y+ A+MF YS+RE+THA RN DDVPE VK+RRL E+I FR +
Sbjct: 348 HAETLSLLEDVRYEQAFMFHYSLREKTHAARNLEDDVPEHVKKRRLAEVIATFRRRALEA 407
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++VG LVLVEG +KK P+ ++ G+SD G RV
Sbjct: 408 NAAEVGRTHLVLVEGASKKDPEAQMSGRSDTGKRVVI 444
>gi|198415552|ref|XP_002127642.1| PREDICTED: similar to CDK5 regulatory subunit associated protein 1
[Ciona intestinalis]
Length = 618
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/525 (49%), Positives = 340/525 (64%), Gaps = 23/525 (4%)
Query: 7 CARRLTTRQLKRSFSLN----LSRNFSHSS--LDLPDGPGLHHFIAQSSLTASQPLADLA 60
C R Q + S S N +R FS + +DL P + FI S D A
Sbjct: 42 CIRGKHITQTECSISSNSLRFWTRTFSSGAKKVDLSHVPDIKDFIKSSQPRIEHVNLDEA 101
Query: 61 PASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFI 120
P + +A + + +Y E YGCQMNVND E +I+K AGY + ++ A+VI +
Sbjct: 102 PPY-LENAVYATPPNGKTVYFEMYGCQMNVNDGEYAWAILKKAGYKKTTDI-NTADVIML 159
Query: 121 NTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHP--PKIVVLGCMAERLKDKI 178
TC+IR+ AE K+W RL K + T + P PKI +LGCMAERLK KI
Sbjct: 160 VTCSIREKAEDKIWNRL-----------KQLKTHKQNYHTPGYPKIGILGCMAERLKKKI 208
Query: 179 LDADKMVDVVCGPDAYRDLPRLLEEVDY-GQKGINTLLSLEETYADISPVRISKNSVTAF 237
++ +K VD+V GPDAYRDLPRLLE+ INT+LS++ETYADI PVR ++S TAF
Sbjct: 209 VEKEKAVDIVAGPDAYRDLPRLLEQATTDSTTAINTMLSVDETYADIMPVRFDQDSKTAF 268
Query: 238 VSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTS 297
VS+MRGC+NMCS+CIVPFTRGRERSRPV SI++E+ L +G+K+V LLGQNVNSY D S
Sbjct: 269 VSIMRGCDNMCSYCIVPFTRGRERSRPVTSILEEIRILSDQGIKQVNLLGQNVNSYRDLS 328
Query: 298 GMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDE 357
+ +S GF ++ K K GLRFADLLDR+S PEMR R+ SPHPKDFPDE
Sbjct: 329 ETQHSAVDAIAGNMSRGFKTIYKPKHGGLRFADLLDRVSQVDPEMRIRFISPHPKDFPDE 388
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
+L I+ +R N+CK IHLPAQ+G+S VL MRRG+TRE YL+LV +IR +IP+V LS+D I
Sbjct: 389 VLQIISERENICKQIHLPAQSGSSNVLNLMRRGHTREDYLNLVDRIRTLIPNVVLSTDII 448
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GFCGET+ +H DTL+LM V Y+ A++F YS+R++THA+ DDVPEE+K +RL E+I
Sbjct: 449 SGFCGETDSDHEDTLSLMSLVKYEYAFLFKYSIRQKTHAYHKMNDDVPEEIKSQRLQEVI 508
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
+ +++ + VG LVLVE K P+T L G++D +V
Sbjct: 509 KVYQDVLPTVHQKTVGKTLLVLVEKDKTKVPNT-LQGRTDGNVKV 552
>gi|281207324|gb|EFA81507.1| hypothetical protein PPL_05496 [Polysphondylium pallidum PN500]
Length = 616
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/503 (49%), Positives = 343/503 (68%), Gaps = 38/503 (7%)
Query: 35 LPDGPGLHHFIA-----QSSLTASQPL--ADLAPASEVSSATGSEVHSQGR-IYQETYGC 86
L + P L+ F+ Q+ L L + P E++ A+G +GR ++ E+YGC
Sbjct: 80 LENVPSLNEFMKNNIDNQNGLVEDTGLDVNHIPPYLEIADASG-----EGRSVFVESYGC 134
Query: 87 QMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKRE 146
QMN D EIV S+M++AGY+ V ++A+++F+NTCAIR+ AE K+W RL+ KR
Sbjct: 135 QMNFADTEIVYSVMRSAGYT-VAESAKSADIVFLNTCAIRENAEDKIWFRLSELRKQKR- 192
Query: 147 WKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDY 206
+ I VLGCMAERLK K+L+++K VD+V GPDAYR LP LL ++
Sbjct: 193 ------------RQGTVIGVLGCMAERLKQKLLESNKSVDLVVGPDAYRSLPSLLSRIED 240
Query: 207 G-QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPV 265
G Q IN +LS +ETYADI+P+R + N V+A+VS+MRGCNNMCS+CIVPFTRGRERSR +
Sbjct: 241 GDQTAINVMLSADETYADIAPIRTNSNGVSAYVSIMRGCNNMCSYCIVPFTRGRERSRSI 300
Query: 266 ESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE------GFNSMC 319
SIV EV +L +G KE+TLLGQNVNSYN +++ VEP A + E GFN++
Sbjct: 301 HSIVDEVKQLSADGYKEITLLGQNVNSYN---FIDEVVEPLAEKKEKEVLTPREGFNTIY 357
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
K K G+ F +L+D++SL PEMR R+TSPHPKDFPD L+ +++ RPN+C+ +H+PAQ+G
Sbjct: 358 KSPKRGVTFTELMDKVSLVDPEMRIRFTSPHPKDFPDALIELIKQRPNICQQLHIPAQSG 417
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
N+ VLERMRRGY+RE+YL L+ IR+ +PD +SSDFI GFCGETE EH DT++L+ AVG
Sbjct: 418 NTEVLERMRRGYSRESYLQLIDLIRRELPDAAISSDFISGFCGETESEHRDTISLLNAVG 477
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
Y+ A+MF YS+RE+THAHR DDV E K RRL E+I+ F + +++G LVL
Sbjct: 478 YENAFMFMYSLREKTHAHRTMADDVDVETKTRRLQEVIDTFYSNLRGKSKAEIGRRHLVL 537
Query: 500 VEGPNKKAPDTELVGKSDRGHRV 522
V+ ++++ D VG++D +V
Sbjct: 538 VDRISRRSKD-HFVGRTDTNKKV 559
>gi|297260004|ref|XP_001103977.2| PREDICTED: CDK5 regulatory subunit-associated protein 1-like
[Macaca mulatta]
Length = 483
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/449 (54%), Positives = 317/449 (70%), Gaps = 25/449 (5%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q ++Y ETYGCQMNVND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W
Sbjct: 8 QRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWN 66
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
RL+ LK T R +S+ P +I +LGCMAERLK++IL+ +KMVDV+ GPDAYR
Sbjct: 67 RLHQLKALK--------TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDVLAGPDAYR 118
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLPRLL + GQ+ N LLSL+ETYAD+ PV+ + ++ +AFVS+MRGC+NMCS+CIVPF
Sbjct: 119 DLPRLLAVAESGQQAANVLLSLDETYADVMPVQTNPSATSAFVSIMRGCDNMCSYCIVPF 178
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSRPV SI++EV +L ++G+KEVTLLGQNVNS+ D S E + + LS GF
Sbjct: 179 TRGRERSRPVASILEEVKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVSTNLSRGF 236
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLP
Sbjct: 237 TTNYKAKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLP 296
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ+G+S VLE MRRG R V LSSDFI GFCGETEE+H T++L+
Sbjct: 297 AQSGSSRVLEAMRRGVMRSL-------------GVSLSSDFIAGFCGETEEDHVQTVSLL 343
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + VG
Sbjct: 344 REVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEATKANQISVGCT 403
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
QLVLVEG +K++ T+L G++D +V F
Sbjct: 404 QLVLVEGLSKRSV-TDLCGRNDGNLKVIF 431
>gi|290996977|ref|XP_002681058.1| predicted protein [Naegleria gruberi]
gi|284094681|gb|EFC48314.1| predicted protein [Naegleria gruberi]
Length = 471
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/476 (50%), Positives = 328/476 (68%), Gaps = 26/476 (5%)
Query: 68 ATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRD 127
T + ++ ++ ETYGCQMNV+D +I+LSI+ GY ++++ + A VI +NTCA+R+
Sbjct: 1 TTSNNNENKKGVFIETYGCQMNVSDTQIILSILDKNGY-KLVDSDKEASVILLNTCAVRE 59
Query: 128 YAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPP----KIVVLGCMAERLKDKILDADK 183
AE+K+W RLN LK++ +N + P +I VLGCMAERLK K+++ +
Sbjct: 60 NAENKIWIRLNE---LKKKRHENKHLHNFNPEEYPVSGVQIGVLGCMAERLKTKLIETN- 115
Query: 184 MVDVVCGPDAYRDLPRLLEE--------------VDYGQKGINTLLSLEETYADISPVRI 229
MVDVV GPD YRDLP LL++ V+ Q +N +LS++ETYADI PVR+
Sbjct: 116 MVDVVVGPDQYRDLPNLLKKNEESEMLQRSLDDNVEGRQAQLNVMLSMDETYADIEPVRV 175
Query: 230 SKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQN 289
+AFVS+MRGC+NMCS+CIVPFTRGRERSR + SI+ E+ +L K G+KEVTLLGQN
Sbjct: 176 GDTGKSAFVSIMRGCDNMCSYCIVPFTRGRERSRDITSILNEIRQLSKNGIKEVTLLGQN 235
Query: 290 VNSYNDTSG---MEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRY 346
VNSY DTS EK G ++GF ++ K K GL F +LL +S EMR RY
Sbjct: 236 VNSYRDTSDSIYQEKYKNEGKEIETTDGFKTIYKPKIGGLTFTELLYEVSQIDKEMRIRY 295
Query: 347 TSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQI 406
TSPHPKD+PD L+ ++R+ PN+C IHLPAQ+G++ +L+RMRRGYT E+Y+ LV +I+
Sbjct: 296 TSPHPKDYPDSLIELIRETPNICNQIHLPAQSGSTNMLDRMRRGYTAESYIALVDRIKNR 355
Query: 407 IPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPE 466
IP+V LSSDFI GFC ETE++H DTL L+ V YD AY+FAYS+RE+THAHRNY DDVP
Sbjct: 356 IPNVALSSDFIAGFCSETEQDHQDTLKLLNHVKYDQAYLFAYSLREKTHAHRNYEDDVPA 415
Query: 467 EVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
+VK RRL EL++ +RE+ Y+ +VGT+Q VL++ +K+ P VG++D RV
Sbjct: 416 DVKNRRLNELVQTYRENLAIQYEKEVGTLQCVLIDSDSKRDPQNYWVGRTDNNKRV 471
>gi|325183820|emb|CCA18278.1| CDK5 regulatory subunitassociated protein 1 putativ [Albugo
laibachii Nc14]
gi|325183990|emb|CCA18448.1| CDK5 regulatory subunitassociated protein 1 putativ [Albugo
laibachii Nc14]
Length = 639
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/535 (48%), Positives = 348/535 (65%), Gaps = 26/535 (4%)
Query: 9 RRLTTRQLKRSFSLNLSRNFSH---SSLDLPDGPGLHHFIAQSSLTASQPL--------- 56
RR ++ L+ SL ++ S SSL+ DG L FI +S L+A P+
Sbjct: 13 RRAPSKALRSQQSLFTTKAKSRKRVSSLNEADGKTLQDFIVRSHLSA-HPIDYPQESIIN 71
Query: 57 --ADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPE 113
+ + S ++ G+E +Q + Y ETYGCQMN D EIV +I+ GY N PE
Sbjct: 72 ETSAMNFPSNLADMDGNEEQTQTKNFYIETYGCQMNTADSEIVHAILVKNGYQLAKN-PE 130
Query: 114 NAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAER 173
+A+VI +NTCAIR+ AE K+W RL W R+ K + +S H P + VLGCMAER
Sbjct: 131 DADVILLNTCAIRENAESKIWNRLEQ-W---RQIKVKLLRHKSTRNHLPTVGVLGCMAER 186
Query: 174 LKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNS 233
LK K+L+ DKMVD+V GPDAYRDLP LL+ V GQ +N LSL+ETYA I PVR ++
Sbjct: 187 LKTKLLECDKMVDLVVGPDAYRDLPNLLQVVRGGQSAVNVQLSLDETYAGIVPVRSDPSN 246
Query: 234 VTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY 293
+AFVS+MRGCNNMCS+CIVPFTRGRERS +ESI+ EV L +GVKE+ LLGQNVNSY
Sbjct: 247 PSAFVSIMRGCNNMCSYCIVPFTRGRERSCELESIISEVKSLRDQGVKEIMLLGQNVNSY 306
Query: 294 NDTSGMEKEVEPGANWRLSEGFNSMCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPK 352
+D + + E G + + GF +M K + G RF D+LD +S EMR R+TSPHPK
Sbjct: 307 HDKQSQQAQ-EKGRAYVSANGFKNMFKARNATGFRFVDVLDHVSQVDSEMRIRFTSPHPK 365
Query: 353 DFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGL 412
DFPD++L ++++R N+C +H+PAQ+G++ VLERMRRGY+REAYL L + +R IP V +
Sbjct: 366 DFPDDVLDLIQERHNICNSVHMPAQSGSTTVLERMRRGYSREAYLALAENMRTRIPGVSI 425
Query: 413 SSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRR 472
SSDFI GFCGETEEEH DTLTL++ V +D A+MF YS+R +THA D+VP+EVK RR
Sbjct: 426 SSDFITGFCGETEEEHQDTLTLIQRVCFDQAFMFTYSLRAKTHAAHRMEDNVPQEVKLRR 485
Query: 473 LTELIEAFRE-STGQCYDSQVGTVQLVLVEGPNKKAPDT--ELVGKSDRGHRVAF 524
L E+I+ F T + + +VLV+G ++++ D +L G +D R F
Sbjct: 486 LKEIIDEFSSIVTRKNLAENSDRLHVVLVQGASRRSTDENPKLTGLTDTNKRCVF 540
>gi|255083280|ref|XP_002504626.1| predicted protein [Micromonas sp. RCC299]
gi|226519894|gb|ACO65884.1| predicted protein [Micromonas sp. RCC299]
Length = 495
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/447 (53%), Positives = 318/447 (71%), Gaps = 13/447 (2%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y ETYGCQMNVND E++LS++K+ GY E ++ +A+VI +NTCAIRD AE K+WQRL
Sbjct: 4 VYVETYGCQMNVNDSEVMLSVLKDRGYDETGDM-HDADVILVNTCAIRDKAEAKIWQRLA 62
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
YF + + P + VLGCMAERLK ++L+AD++ D+V GPDAYRDLP
Sbjct: 63 YF---------KSLRRKKKKSEKPVVGVLGCMAERLKTQLLEADQLADLVAGPDAYRDLP 113
Query: 199 RLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
L+E V G+K +N LS+EETYADI PVR + + AFV++MRGC+N C+FCIVP+TR
Sbjct: 114 NLIEAVAGTGEKAMNVQLSVEETYADIIPVR-KEGAHAAFVTIMRGCDNACAFCIVPYTR 172
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SI EV L ++GVKEVTLLGQNVNSY G + A G ++
Sbjct: 173 GRERSRDPASIEYEVRLLSEQGVKEVTLLGQNVNSYAYQEGETDFLSMLAAGEGVVGSDA 232
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ ++ ++FA LLDR++ PEMR R+TSPHPKDFPDE+L ++ RPNVC +H+PAQ
Sbjct: 233 AARRREGAVQFAALLDRVAAIDPEMRVRFTSPHPKDFPDEVLEVIARRPNVCNCLHMPAQ 292
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++A LERM RGYTREAYL L+ ++++IIP +++D I GFCGETEE+HADT++LMKA
Sbjct: 293 SGSTATLERMARGYTREAYLTLIDRVKEIIPGCAITTDIISGFCGETEEDHADTVSLMKA 352
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGY+ A+MFAYS R+ T A R+ DDVPE+VKQRRL E+I+AFR + + +VG L
Sbjct: 353 VGYEQAFMFAYSERDGTSAARHQEDDVPEDVKQRRLAEVIDAFRTTAAERQKEEVGRTHL 412
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + EL GK+D F
Sbjct: 413 VLVEGPSKK-NERELTGKTDSAKWAVF 438
>gi|449274130|gb|EMC83413.1| CDK5 regulatory subunit-associated protein 1, partial [Columba
livia]
Length = 482
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/449 (54%), Positives = 318/449 (70%), Gaps = 22/449 (4%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y ETYGCQMNVND EI +I++ +GY ++ E A+VI + TC++R+ AE +W RL
Sbjct: 1 VYLETYGCQMNVNDTEIAWAILQKSGYVRTRDLAE-ADVILLVTCSVREKAEQTIWNRLQ 59
Query: 139 YFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ LK R Q PP +I +LGCMAERLK++IL +K+VD+V GPDA
Sbjct: 60 HLKALK---------ARRQPARPPLRIGILGCMAERLKEEILHREKLVDIVAGPDAX--- 107
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
N LLSL+ETYADI PV+ S TAFVS+MRGC+NMCS+CIVPFTR
Sbjct: 108 ---XXXXXXXXXXANVLLSLDETYADILPVQTSAGGTTAFVSIMRGCDNMCSYCIVPFTR 164
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSRPV SI++EV L +GVKEVTLLGQNVNS+ DTS E + + A LS GF++
Sbjct: 165 GRERSRPVASILQEVRMLSDQGVKEVTLLGQNVNSFRDTS--EVQFQSTAAPGLSRGFST 222
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDE--LLYIMRDRPNVCKYIHLP 375
+ K K GLRFA LLD++S PEMR R+TSPHPKDFPDE +L ++++R N+CK +HLP
Sbjct: 223 VYKAKPGGLRFAHLLDQVSRIDPEMRIRFTSPHPKDFPDEASVLQLIQERHNICKQLHLP 282
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ+G++ VLE MRRGYTREAYL+LVQ +R+ IP V LSSDFI GFCGETEE+H TL+L+
Sbjct: 283 AQSGSTRVLETMRRGYTREAYLELVQHVRESIPGVSLSSDFIAGFCGETEEDHQQTLSLL 342
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V Y++ ++FAYSMR++T A+ DDVP +VK+RRL ELI FRE + + + VG
Sbjct: 343 REVRYNVGFLFAYSMRQKTRAYHRLQDDVPADVKKRRLEELITVFREEAARAHRAMVGQA 402
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
QLVLVEGP+K++ +EL G++D +V F
Sbjct: 403 QLVLVEGPSKRSA-SELCGRNDGNIKVIF 430
>gi|403353811|gb|EJY76448.1| RNA modification enzyme, MiaB family [Oxytricha trifallax]
Length = 607
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/453 (53%), Positives = 318/453 (70%), Gaps = 22/453 (4%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ET+GCQMNV D EIV SIM++AG+ E + + A+V+ +NTCAIR+ AE K+W ++
Sbjct: 114 FIETHGCQMNVADTEIVQSIMESAGF-EHTDAMQQADVVLVNTCAIRENAEKKIWNKIES 172
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
+ ++ K G VLGCMAERLKDK L+ +K VD+V GPD+YRDLPR
Sbjct: 173 NYSQVKKNNKEAIVG-----------VLGCMAERLKDKFLE-NKTVDLVAGPDSYRDLPR 220
Query: 200 LLEEVDY------GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
L++ ++ ++ IN LS +ETYADI PVR KN + A++S+MRGCNNMCSFCIV
Sbjct: 221 LIKILESKHNSSNDEQAINVQLSFDETYADILPVRKDKNKLHAWISIMRGCNNMCSFCIV 280
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL-S 312
PFTRGRERSRPV SI EV L +G++E+TLLGQNVNSY+D + + E L S
Sbjct: 281 PFTRGRERSRPVHSIEDEVKLLRDQGIREITLLGQNVNSYHDLTQAAQMNEFAEGKHLNS 340
Query: 313 EGFNSMCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
EGF M K++ G+RFA+L+DR+S PE+RFR+TSPHPKDFPD LL ++ +PNVCK
Sbjct: 341 EGFKEMYKLRDGNGIRFAELMDRVSDIAPEVRFRFTSPHPKDFPDPLLQVIASKPNVCKQ 400
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLPAQ+GN+ +L RMRR YTREAYLDLV R +IP V LSSDFICGFC ET++E DT
Sbjct: 401 LHLPAQSGNTNMLTRMRRNYTREAYLDLVSHARNLIPGVALSSDFICGFCDETDQEFEDT 460
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
+TL++ V +DM ++FAYSMRERTHAHR D+VPE+VKQ RL +IE F+++ +
Sbjct: 461 ITLLEQVKFDMGFLFAYSMRERTHAHRAMKDNVPEDVKQSRLVHMIEVFKKNQLIKQLEE 520
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G LVL++G +K+ DT+L G +D R F
Sbjct: 521 IGQHHLVLIDGFSKRG-DTQLSGLTDTNKRAVF 552
>gi|167533556|ref|XP_001748457.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772976|gb|EDQ86621.1| predicted protein [Monosiga brevicollis MX1]
Length = 1020
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/498 (50%), Positives = 334/498 (67%), Gaps = 29/498 (5%)
Query: 37 DGPGLHHFIAQSSLTASQPLAD----------LAPASEVSSATGSEVHSQGRIYQETYGC 86
DGPG F+ QSS + AD AP E S G +VH E YGC
Sbjct: 74 DGPGFEDFLRQSSTPLADDKADPDKYRPRDAPYAPIDE-QSLLGRKVHI------EAYGC 126
Query: 87 QMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKRE 146
QMNV+D EI SI+KNAG + E A+V + TCAIR+ AE+K+W RLN KR
Sbjct: 127 QMNVSDAEIAWSILKNAGCVRC-DTAEEADVTLLVTCAIRENAENKIWSRLNQLKAHKRR 185
Query: 147 WKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDY 206
GR+++ +I VLGCMAERLK K+L+ +K +D+V GPDAYRDLPR+L +
Sbjct: 186 L------GRTRNF---QIGVLGCMAERLKHKLLEQEKAIDLVAGPDAYRDLPRMLMDSAQ 236
Query: 207 GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVE 266
GQ +N LLSL+ETYADI+PVR + NS AFVS+ RGC N CS+CIVPFTRGRERSR +E
Sbjct: 237 GQAQVNVLLSLDETYADITPVRTNPNSPAAFVSIQRGCANNCSYCIVPFTRGRERSRQIE 296
Query: 267 SIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGL 326
+IV+EV L ++GVKEVTLLGQNVNSY D +G++ +V +++GF ++ K ++ G
Sbjct: 297 TIVEEVAHLSRQGVKEVTLLGQNVNSYRDLTGID-DVRNEPVVSMAKGFGTIYKPRRGGR 355
Query: 327 RFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLER 386
F +LL ++ P MR R+TSPHPKDFPD++L + PN+CK IH+PAQ+G++ +LE
Sbjct: 356 GFGELLRAVAEVDPTMRIRFTSPHPKDFPDDVLEAIATTPNICKQIHIPAQSGSTRMLEL 415
Query: 387 MRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMF 446
MRR +TREAYLDLVQ +RQ+IP V LSSDFI GFCGETE +H DT +L++ V YDMA++F
Sbjct: 416 MRRNHTREAYLDLVQHMRQVIPGVALSSDFIAGFCGETEADHEDTRSLIEMVDYDMAFLF 475
Query: 447 AYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKK 506
AYSMR +THA+ DDVPE+VK+RRL E+ + F ++G++QLVLVE +++
Sbjct: 476 AYSMRAKTHAYHRMQDDVPEDVKKRRLEEIRDQFYGGATLKNQRRIGSLQLVLVEKRSRR 535
Query: 507 APDTELVGKSDRGHRVAF 524
D E G++D R F
Sbjct: 536 NQD-EWSGRTDGNIRAVF 552
>gi|303288614|ref|XP_003063595.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454663|gb|EEH51968.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 548
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 244/447 (54%), Positives = 314/447 (70%), Gaps = 22/447 (4%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y ETYGCQMNVND E++LS++ + GY +V +A+VI INTCAIRD AE K+WQRL
Sbjct: 92 VYTETYGCQMNVNDSEVMLSVLADNGYDTTDDV-HDADVILINTCAIRDKAEAKIWQRLA 150
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
YF L+R KKN P + VLGCMAERLK ++L+AD++ D+V GPDAYRDLP
Sbjct: 151 YFKSLRRRRKKN---------EKPVVGVLGCMAERLKTQLLEADQLADLVAGPDAYRDLP 201
Query: 199 RLLEEVDY-GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
L+ V+ G+K +N LS+EETYADI PVR + + AFV++MRGC+N CSFCIVP+TR
Sbjct: 202 NLISAVNSSGEKAMNVQLSVEETYADIVPVR-KEGAHAAFVTIMRGCDNACSFCIVPYTR 260
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SI EV L ++GVKEVTLLGQNVNSY + E GA ++G
Sbjct: 261 GRERSRDPASIEYEVRLLSEQGVKEVTLLGQNVNSYAYVA------EEGAG---ADGATD 311
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
++FA LLDR++ PEMR R+TSPHPKDFPDE+L ++++RPNVCK +H+PAQ
Sbjct: 312 FLSKLTGSMQFAALLDRVASVDPEMRVRFTSPHPKDFPDEVLEVIKNRPNVCKCLHMPAQ 371
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ LERM RGYTREAYLDL++ + + IP +++D I GFC ETEEEH DT++LMK
Sbjct: 372 SGSTTTLERMARGYTREAYLDLIKNVHEKIPGCAITTDIITGFCAETEEEHEDTVSLMKL 431
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y+ A+MFAYS RE T A R DDV ++VKQRRL E+I+AFR S + + ++G V L
Sbjct: 432 VKYEQAFMFAYSEREGTAAARKMSDDVDDDVKQRRLAEIIDAFRSSASERNEREIGRVHL 491
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +KK D EL GK+D V F
Sbjct: 492 CLVEGVSKKN-DRELTGKTDTSKWVVF 517
>gi|330803397|ref|XP_003289693.1| hypothetical protein DICPUDRAFT_36174 [Dictyostelium purpureum]
gi|325080203|gb|EGC33768.1| hypothetical protein DICPUDRAFT_36174 [Dictyostelium purpureum]
Length = 538
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/503 (46%), Positives = 344/503 (68%), Gaps = 33/503 (6%)
Query: 35 LPDGPGLHHFIA-------QSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQ 87
+ D P L+ F+ Q +++ ++ P + S +E +Y ETYGCQ
Sbjct: 1 MKDVPSLNEFLKSQISKEDQDNISMRHVTPEIPPY--LQSTIMNETGEGKNVYIETYGCQ 58
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN D E++ SI+K +GY ++I+ + A+++F+NTCAIR+ AE K+W RL+ KR+
Sbjct: 59 MNFADTEVINSILKTSGY-KIIDTLKEADIVFLNTCAIRENAESKIWLRLSELRSKKRKE 117
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
K+N+ I V+GCMAERLK+K+L+++ VD+V GPDAYR LP LL ++ G
Sbjct: 118 KRNIT-----------IAVIGCMAERLKEKLLESEHRVDIVVGPDAYRSLPSLLAKIQDG 166
Query: 208 --QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPV 265
Q IN +LS +ETYADI+PVR S N V+A+VS+MRGCNNMCS+CIVPFTRGRERSRPV
Sbjct: 167 EQQTAINVMLSADETYADITPVRTSDNMVSAYVSIMRGCNNMCSYCIVPFTRGRERSRPV 226
Query: 266 ESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK------EVEPGANWRLSEGFNSMC 319
ESI+ EV +L ++G KE+TLLGQNVNSYN E E+E + +GF ++
Sbjct: 227 ESILNEVRQLSEQGYKEITLLGQNVNSYNFVDNEESTPVNKDEIE---KLKPRDGFKTIY 283
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
K K G+ F +L+ +S PEMR R+TSPHPKDFP++LL ++++ PN+C +H+PAQ+G
Sbjct: 284 KSPKKGISFTELIKLVSEVDPEMRIRFTSPHPKDFPNDLLELVKNTPNICNSLHIPAQSG 343
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S VLE MRRGYTRE+YL+L+ I++ +PD +SSDFI GFCGETE++H +T++LM+ VG
Sbjct: 344 SSKVLESMRRGYTRESYLELIDTIKKELPDCTISSDFISGFCGETEQDHLETISLMEYVG 403
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
++ A+MF YS+RE+THAHR+ DDV E K RRL+++++ F + + + ++G LVL
Sbjct: 404 FENAFMFMYSLREKTHAHRHLKDDVSVEDKARRLSQVVDTFYKLLKEKSNKEIGNFHLVL 463
Query: 500 VEGPNKKAPDTELVGKSDRGHRV 522
++ ++++ + + VG++D +V
Sbjct: 464 IDRLSRRS-NNDFVGRTDTNKKV 485
>gi|242020507|ref|XP_002430694.1| CDK5 regulatory subunit-associated protein, putative [Pediculus
humanus corporis]
gi|212515884|gb|EEB17956.1| CDK5 regulatory subunit-associated protein, putative [Pediculus
humanus corporis]
Length = 581
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 234/485 (48%), Positives = 336/485 (69%), Gaps = 16/485 (3%)
Query: 39 PGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHS-QGRIYQETYGCQMNVNDMEIVL 97
P L F+ + Q D+ + + + +H +++ E +GCQMNVND EIVL
Sbjct: 42 PTLKDFLIKEQNNKIQSWIDVK-SDNIPYLNDTTIHGGNQKVFLEVHGCQMNVNDAEIVL 100
Query: 98 SIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQ 157
S+++ GY ++ ++A+VIFI TC+IR+ AE K+W +K +
Sbjct: 101 SVLQKHGYQRTLS-KDDADVIFILTCSIRESAESKIW------------FKLKELNHLKK 147
Query: 158 SKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSL 217
K KI +LGCMAERLKDK+++ +K+VD+V GPDAY+DLPRLL QK IN LLS
Sbjct: 148 KKKNLKIGLLGCMAERLKDKVIEKEKIVDLVAGPDAYKDLPRLLTTTSNNQKAINVLLSF 207
Query: 218 EETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWK 277
+ETYAD+ PVR+++N+V+AFVS+MRGC+NMC++CIVPFTRGRERSRP++SI++EV L
Sbjct: 208 DETYADVMPVRLNENNVSAFVSIMRGCDNMCTYCIVPFTRGRERSRPIDSILEEVKILSD 267
Query: 278 EGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSL 337
+GVK++TLLGQNVNSY D E +++GF ++ K K G+RF+ LLD++S
Sbjct: 268 QGVKQITLLGQNVNSYRDIKSKEYLSTFNEPTVVADGFKTVYKPKIGGVRFSTLLDKVSE 327
Query: 338 EFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYL 397
PEMR R+TSPHPKDFPD++L+++++R N+C +IHLP Q+G++ VLERMRRGYTREAY+
Sbjct: 328 VNPEMRIRFTSPHPKDFPDDVLHLIKERKNICNFIHLPIQSGSNQVLERMRRGYTREAYI 387
Query: 398 DLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAH 457
LV+ IR +IP++ LS+D I GFCGETE++H DT+ +++ + Y Y F YSMRE+T AH
Sbjct: 388 KLVENIRSLIPNIVLSTDIITGFCGETEKDHEDTMEMIRLIQYHQMYFFPYSMREKTTAH 447
Query: 458 RNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSD 517
R Y DDVP+EVK RR E+ FR + + +SQ+ VQ++L+EG +K++ + L G++D
Sbjct: 448 RRYEDDVPQEVKMRRFQEVGAEFRRISKKLNESQINQVQVILIEGFSKRS-NEYLAGRND 506
Query: 518 RGHRV 522
+V
Sbjct: 507 GNIKV 511
>gi|14042133|dbj|BAB55120.1| unnamed protein product [Homo sapiens]
Length = 395
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/398 (57%), Positives = 297/398 (74%), Gaps = 11/398 (2%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q ++Y ETYGCQMNVND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W
Sbjct: 9 QRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWN 67
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
RL+ LK T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYR
Sbjct: 68 RLHQLKALK--------TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYR 119
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLPRLL + GQ+ N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVP
Sbjct: 120 DLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPL 179
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSRP+ S ++EV +L ++G+KEVTLLGQNVNS+ S E + LS GF
Sbjct: 180 TRGRERSRPIASTLEEVKKLSEQGLKEVTLLGQNVNSFRGNS--EVQFNSAVPTNLSRGF 237
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLP
Sbjct: 238 TTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLP 297
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ+G+S VLE MRRGY+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L+
Sbjct: 298 AQSGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLL 357
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRL 473
+ V Y+M ++FAYSMR++T A+ DDVPEEVK RRL
Sbjct: 358 REVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRL 395
>gi|145356333|ref|XP_001422387.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582629|gb|ABP00704.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 579
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/461 (51%), Positives = 330/461 (71%), Gaps = 21/461 (4%)
Query: 71 SEVHSQGR--IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDY 128
E ++GR +Y ETYGCQMNVND E+++++++ AGY E V +A+VI INTCAIRD
Sbjct: 59 GEEDARGRRAVYVETYGCQMNVNDSEVMMAVLEGAGYDETKEV-NDADVILINTCAIRDK 117
Query: 129 AEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVV 188
AE K+WQRL YF +++ G+ +S+ P + VLGCMAER+K+K+L+AD++ D+V
Sbjct: 118 AEAKIWQRLAYF--------RSLGNGKKRSEKP-VVGVLGCMAERIKEKLLEADRLADIV 168
Query: 189 CGPDAYRDLPRLLEEV--DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNN 246
GPDAYRDLP L++ V + G K +N LS+EETYADI PVR S +AFV++MRGC+N
Sbjct: 169 AGPDAYRDLPNLIDAVVGNPGGKAMNVQLSVEETYADIIPVR-EAGSHSAFVTIMRGCDN 227
Query: 247 MCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPG 306
C+FCIVP+TRGRERSR + SI+ E+ L ++GVKEVTLLGQN+ N ++
Sbjct: 228 ACAFCIVPYTRGRERSRDLASIMYEIRLLSEQGVKEVTLLGQNLA--NASTERLASASGS 285
Query: 307 ANWRLSEGFNSMC--KVKKMG-LRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMR 363
A ++GF S + K+ G ++FA+LLD+++ PEMR R+TSPHPKDFPD++L ++R
Sbjct: 286 AFVGYADGFASRYDPERKRAGTIQFAELLDKVASVDPEMRIRFTSPHPKDFPDDVLRVIR 345
Query: 364 DRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGE 423
DRPNV K +H+PAQ+G+SA LERM RGYTRE+Y L+ +++ +IP +++D I GFCGE
Sbjct: 346 DRPNVSKCLHMPAQSGSSATLERMARGYTRESYFALIDRVKAMIPGCAITTDIISGFCGE 405
Query: 424 TEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRES 483
TE++H DT++LM A+GY+ A+MFAYS RE T R+ +DDVPE+VKQRRL E+I+AFR
Sbjct: 406 TEDDHEDTVSLMSAIGYEQAFMFAYSEREGTAGQRHQIDDVPEDVKQRRLQEVIDAFRAR 465
Query: 484 TGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ ++G+ VLVEGP+KK D E GK+D V F
Sbjct: 466 AAEKQQMEIGSTHCVLVEGPSKKNSD-EWTGKTDTSKWVVF 505
>gi|412988260|emb|CCO17596.1| predicted protein [Bathycoccus prasinos]
Length = 694
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/490 (48%), Positives = 327/490 (66%), Gaps = 57/490 (11%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y ETYGCQMNVND E+++S++ + G++E ++ +A VI INTCAIRD AE K+WQRL
Sbjct: 144 VYVETYGCQMNVNDSEVMMSVLNDNGFTETKDI-NDANVILINTCAIRDKAEAKIWQRLA 202
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
YF L + KK P + VLGCMAERLK ++L+ D++ D+V GPDAYRDLP
Sbjct: 203 YFRSLGKPKKKT---------ERPVVGVLGCMAERLKTQLLEEDQLADIVAGPDAYRDLP 253
Query: 199 RLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
L++ V + G K +N LS+EETYAD+ PVR + +AFV++MRGC+N C+FCIVP+TR
Sbjct: 254 NLIDTVHNTGNKSMNVQLSVEETYADVIPVR-PDGTHSAFVTIMRGCDNCCTFCIVPYTR 312
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY------------------------ 293
G+ERSR + SI+ EV L ++GVKEVTLLGQNVNSY
Sbjct: 313 GQERSRDLASILYEVRVLSEQGVKEVTLLGQNVNSYYVDTNKSEDFLSSLKEGNIVGNNS 372
Query: 294 ----------------NDTSGMEKEVEPGANWRLSEGFNS---MCKVKKMGLRFADLLDR 334
+ +G+ E +P + GF S + ++ ++FA+LLDR
Sbjct: 373 IEAILNINNAREELNMKNAAGLAGE-DPAKFNGYAAGFESRYDAGRKREGKVQFAELLDR 431
Query: 335 LSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTRE 394
++ PEMR R+TSPHPKDFPD++L ++RDRPNVCK +H+PAQ+G++A L RMRRGY+RE
Sbjct: 432 VAQVDPEMRIRFTSPHPKDFPDDVLNVIRDRPNVCKCLHMPAQSGSTATLVRMRRGYSRE 491
Query: 395 AYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERT 454
AYLDLV ++++IPD +++D I GFCGETE++H DT++LM VGY+ A+MFAYS R+ T
Sbjct: 492 AYLDLVDHVKEVIPDCAITTDIISGFCGETEKDHEDTVSLMNIVGYEQAFMFAYSERDGT 551
Query: 455 HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVG 514
A R+ DDVPE+VKQ RL E+IEAFR + + ++G+V VL+EGP+KK + E G
Sbjct: 552 AAARHLEDDVPEDVKQNRLAEVIEAFRTQAQKKQEQEIGSVHCVLIEGPSKK-NENEWTG 610
Query: 515 KSDRGHRVAF 524
K+D V F
Sbjct: 611 KTDSSKWVVF 620
>gi|66807387|ref|XP_637416.1| hypothetical protein DDB_G0287079 [Dictyostelium discoideum AX4]
gi|74853166|sp|Q54KV4.1|CK5P1_DICDI RecName: Full=CDK5RAP1-like protein
gi|60465830|gb|EAL63904.1| hypothetical protein DDB_G0287079 [Dictyostelium discoideum AX4]
Length = 607
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/462 (48%), Positives = 330/462 (71%), Gaps = 33/462 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV+D E++ SIMK++GY+ + N A+++F+NTC+IR+ AE K+W RL
Sbjct: 108 KVWIETYGCQMNVSDEEVICSIMKSSGYT-ISNDFNTADIVFLNTCSIRENAEAKIWLRL 166
Query: 138 NYFWFLKR-EWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
++R + + N+ G VLGCMAERLK+K+L++D VD+V GPDAYR
Sbjct: 167 TELRAIRRKQGRPNLIVG-----------VLGCMAERLKEKLLESDMKVDIVVGPDAYRS 215
Query: 197 LPRLLEEVDYG--QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP LL ++ G Q IN +LS +ETYADI PVR S N V+A+VS+MRGCNNMCS+CIVP
Sbjct: 216 LPSLLATLEDGEQQTAINVILSADETYADIKPVRKSDNQVSAYVSIMRGCNNMCSYCIVP 275
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN--------------DTSGME 300
FTRGRERSRP++SI++EV +L +G KE+TLLGQNVNS+N DT +
Sbjct: 276 FTRGRERSRPIDSILREVKDLSDQGFKEITLLGQNVNSFNYYEESNNNNNENFIDTQKNK 335
Query: 301 KEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
E+E + + EGF ++ K K G+ F L++ +S PE+R R+TSPHPKDFPD+LL
Sbjct: 336 LELE---SLKPREGFKTIYKSPKKGITFTKLMELVSKVDPEIRIRFTSPHPKDFPDDLLE 392
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
+++++PN+CK +H+PAQ+G+S VLE MRRGYTRE+Y++L+ I++++P +SSDFI GF
Sbjct: 393 LIKNQPNICKQLHIPAQSGSSKVLESMRRGYTRESYIELIDTIKRVLPGCAISSDFISGF 452
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGE++++H +T++LM+ VGY+ A+MF YS+RE+THAHR DDVP +K RLT++++ F
Sbjct: 453 CGESDQDHNETISLMEYVGYENAFMFMYSLREKTHAHRQLKDDVPTTLKNSRLTQVVDTF 512
Query: 481 RESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
+ + ++G LVLV+G +K++ + + VG++D +V
Sbjct: 513 YKRLKEKNQLEIGNHHLVLVDGFSKRS-EKDFVGRTDTNKKV 553
>gi|384501397|gb|EIE91888.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rhizopus delemar RA
99-880]
Length = 561
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/453 (51%), Positives = 311/453 (68%), Gaps = 28/453 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y E YGCQMNVND EI+ +IM GY ++ + A V+F+ TCAIRD AE ++W+RL
Sbjct: 85 KFYIEVYGCQMNVNDTEILNAIMTKTGYERTSDI-DQAHVVFLVTCAIRDNAEVRIWERL 143
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
Y R +K + PP + VLGCMAERLK K+L+ D++VD+VCGPD YR +
Sbjct: 144 KYL----RHYKTKINV-----DSPPIVGVLGCMAERLKSKLLEEDRLVDIVCGPDGYRSI 194
Query: 198 PRL--LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
P L L E +Y N +LS +ETYAD+ P+R+ ++V+ +VS+MRGCNNMC+FCIVPF
Sbjct: 195 PHLISLAEDEYEGGVANVMLSADETYADVMPMRLDTDNVSGWVSIMRGCNNMCAFCIVPF 254
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW--RLSE 313
TRG ERSRP++SI+ EV L +GVKE +Y DTS K P N LS
Sbjct: 255 TRGNERSRPMDSILDEVRYLSDQGVKE---------AYRDTSE-SKYFMPSKNIGSDLSN 304
Query: 314 -GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
GF ++ K K+ G RF +LLD++S PEMR R+TSPHPKDFP +LL+++ +RPN+C I
Sbjct: 305 PGFKTIYKRKEGGRRFTELLDKVSQIDPEMRIRFTSPHPKDFPTDLLHLIAERPNICNSI 364
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G++ VLERMRRGYTREAY DLV+++R+IIPDV +SSDFI GFCGETE+EH DT+
Sbjct: 365 HLPIQSGSNTVLERMRRGYTREAYFDLVEQMRKIIPDVWISSDFITGFCGETEQEHKDTV 424
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
LM+ V YDMA+MFAYSMRE+THAHR YVD+V E +K +RL E++ F + +
Sbjct: 425 DLMERVKYDMAFMFAYSMREKTHAHRKYVDNVEETIKNKRLQEIVSTFHREASIKNQNLI 484
Query: 493 GTVQLVLVEGPNKKAP---DTELVGKSDRGHRV 522
G+ LVL++ K +T+ G++D GH+V
Sbjct: 485 GSTHLVLIDSDKPKTKYGIETKSSGRTDGGHKV 517
>gi|348664547|gb|EGZ04402.1| hypothetical protein PHYSODRAFT_536500 [Phytophthora sojae]
gi|348671225|gb|EGZ11046.1| hypothetical protein PHYSODRAFT_317995 [Phytophthora sojae]
Length = 597
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 255/515 (49%), Positives = 327/515 (63%), Gaps = 41/515 (7%)
Query: 19 SFSLNLSRNFSHSSLDLP-DGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQG 77
S S N S LP DGPGL F+ +S Q A+ A
Sbjct: 27 SSSANAQAKVKVQSSRLPRDGPGLGDFLRESQSHDHQRTAEAA----------------- 69
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+E V IV +I+ GYS + + A+V+ INTCA+RD AE K+W RL
Sbjct: 70 ---REPSEMNFPVAPSSIVRAILLEGGYSPASSA-DAADVVLINTCAVRDNAEAKIWNRL 125
Query: 138 NYFWFLKREW---KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
+K + K+ V T + VLGCMAERLK K+L++DKMVD+V GPDAY
Sbjct: 126 ESLRQVKAKLLRKKQKVQT----------VGVLGCMAERLKTKLLESDKMVDLVVGPDAY 175
Query: 195 RDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
RD+P LL V G+ +N LSL+ETYADI+PVR +S +AFVS+MRGCNNMCS+CIV
Sbjct: 176 RDIPNLLRVVHGSGEAAVNVQLSLDETYADIAPVRADPHSPSAFVSIMRGCNNMCSYCIV 235
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
PFTRGRERSR + SIV EV L +GVKEV LLGQNVNSY+D E E G + S
Sbjct: 236 PFTRGRERSRVISSIVDEVRALSDQGVKEVVLLGQNVNSYHDKKS-EGAAEKGRGYVSSA 294
Query: 314 GFNSMCKVKKM-GLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
GF++M + + G RFADLL+ +S PEMR R+TSPHPKDFP+E+L ++ +RPN+CK I
Sbjct: 295 GFSNMFRSRDAPGFRFADLLEEVSRVDPEMRLRFTSPHPKDFPNEVLDLVNERPNICKQI 354
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
H+PAQ+G++ +LERMRRGY+REAYL LV +R IP V +SSDFI GFCGETEEEHADT+
Sbjct: 355 HMPAQSGSTTMLERMRRGYSREAYLALVDNMRTRIPGVAISSDFITGFCGETEEEHADTI 414
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRE-STGQCYDSQ 491
+LM+ V YD A+MFAYS+R RTHA DDVP+E K RRL E+I+ F E T + Y
Sbjct: 415 SLMRQVCYDQAFMFAYSIRARTHAAHRMEDDVPQEDKLRRLREVIDTFSEVVTRKNYVED 474
Query: 492 VGTVQLVLVEGPNKKAPDTE--LVGKSDRGHRVAF 524
+ +VLV+GP++++ D + L G +D R F
Sbjct: 475 SDRLHIVLVQGPSRRSTDEDPKLTGLTDTSKRCVF 509
>gi|194224319|ref|XP_001500825.2| PREDICTED: CDK5 regulatory subunit-associated protein 1 [Equus
caballus]
Length = 539
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/432 (53%), Positives = 308/432 (71%), Gaps = 21/432 (4%)
Query: 35 LPDGPGLHHFIAQSSL----TASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
L GP HF+ +S+ +S + D P V G Q ++Y ETYGCQMNV
Sbjct: 60 LATGPTFQHFLRNASVPQENLSSLDVEDPPPYLTVDQLLGR----QRKVYLETYGCQMNV 115
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
ND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 116 NDTEIAWSILQKSGYLRTNNLQE-ADVILLVTCSIREKAEQTIWNRLHQLRALK------ 168
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
T R +S+ P +I +LGCMAERLK++IL+ +K+VD++ GPDAYRDLPRLL + GQ+
Sbjct: 169 --TKRPRSRVPLRIGILGCMAERLKEEILNREKIVDILAGPDAYRDLPRLLAVAESGQQA 226
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SIV+
Sbjct: 227 ANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASIVE 286
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV +L ++G+KEVTLLGQNVNS+ D S E + + LS GF++ K K+ GLRFA
Sbjct: 287 EVRKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAMSTSLSRGFSTNYKTKQGGLRFAH 344
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IH+PAQ+G+S VLE MRRG
Sbjct: 345 LLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHVPAQSGSSRVLEAMRRG 404
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAY++L+ IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSM
Sbjct: 405 YSREAYVELIHHIRESIPGVSLSSDFIAGFCGETEEDHLQTVSLLREVQYNMGFLFAYSM 464
Query: 451 RERTHAHRNYVD 462
R+ H+ R+ D
Sbjct: 465 RQ--HSKRSSTD 474
>gi|301107328|ref|XP_002902746.1| CDK5 regulatory subunit-associated protein 1 [Phytophthora
infestans T30-4]
gi|262097864|gb|EEY55916.1| CDK5 regulatory subunit-associated protein 1 [Phytophthora
infestans T30-4]
Length = 594
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 257/527 (48%), Positives = 335/527 (63%), Gaps = 38/527 (7%)
Query: 6 RCARRLTTRQLKRSFSLNLSRNFSHSSLDLP-DGPGLHHFIAQSSLTASQPLADLAPASE 64
RC+R + + + S S ++ S +LP DGP L F+ +S Q A+ ASE
Sbjct: 10 RCSRAVAVVRFESSSSHAQTKKVKVHSSNLPSDGPSLGDFLRESQTNEHQRTAE--AASE 67
Query: 65 VSSATGSEVHSQGRIYQETYGCQMN--VNDMEIVLSIMKNAGYSEVINVPENAEVIFINT 122
S +MN V IV +I+ +GY+ V+ +NT
Sbjct: 68 PS--------------------EMNFPVAPTTIVRAILLESGYTSAPAADAADVVL-LNT 106
Query: 123 CAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDAD 182
CA+RD AE K+W RL +K + R Q K + VLGCMAERLK K+LD+D
Sbjct: 107 CAVRDNAEAKIWNRLESLRQVKAKLL------RLQHKKVQTVGVLGCMAERLKKKLLDSD 160
Query: 183 KMVDVVCGPDAYRDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
KMVD+V GPDAYRD+P LL V G+ +N LSL+ETYADI+PVR +S +AFVS+M
Sbjct: 161 KMVDLVVGPDAYRDIPNLLRVVLGSGEAAVNVQLSLDETYADIAPVRADPHSPSAFVSIM 220
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNNMCS+CIVPFTRGRERSR + SIV EV L +GVKEV LLGQNVNSY+D E
Sbjct: 221 RGCNNMCSYCIVPFTRGRERSRVMNSIVDEVRALSDQGVKEVVLLGQNVNSYHDKKS-EG 279
Query: 302 EVEPGANWRLSEGFNSMCKVKKM-GLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
E G + S GF++M + + G RFADLLD++S PEMR R+TSPHPKDFP+E+L
Sbjct: 280 AAEKGRGYVSSTGFSNMFRSRDAPGFRFADLLDKVSRVDPEMRLRFTSPHPKDFPNEVLD 339
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
++ +RPN+CK IH+PAQ+G++ +LERMRRGY+REAYL LV +R IP V +SSDFI GF
Sbjct: 340 LVNERPNICKQIHMPAQSGSTTMLERMRRGYSREAYLALVDNMRARIPGVAISSDFIAGF 399
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGETEEEHADT++LM+ V YD A+MFAYS+R RTHA DDV +E K RRL E+I+ F
Sbjct: 400 CGETEEEHADTISLMRQVCYDQAFMFAYSVRARTHAAHRMEDDVTQEEKLRRLREVIDTF 459
Query: 481 RE-STGQCYDSQVGTVQLVLVEGPNKKAPDTE--LVGKSDRGHRVAF 524
E T + + + +VLV+GP++++ D + L G +D R F
Sbjct: 460 SEVVTRKNHIEDSDRLHIVLVQGPSRRSTDDDPKLTGLTDTSKRCVF 506
>gi|303290697|ref|XP_003064635.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453661|gb|EEH50969.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 530
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/460 (53%), Positives = 312/460 (67%), Gaps = 35/460 (7%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGCQMNV+D EIV S++++ Y V +V V+ +NTCAIRD AE K+W RL
Sbjct: 28 FIETYGCQMNVSDSEIVASVLQSNRYVVVDDVDAADAVL-VNTCAIRDGAEAKIWHRLRQ 86
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
LKREWK +K+ P + VLGCM ERLK K+L+ D + D+V GPDAYRDLPR
Sbjct: 87 ---LKREWK--------DAKNAPVVGVLGCMGERLKHKLLETDGLADLVAGPDAYRDLPR 135
Query: 200 LLEEVDYGQKG-------INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
L++ G IN L +ETYAD+ PVR + +AFVS+MRGCNNMC+FCI
Sbjct: 136 LIDVARGAWSGGGSVEAAINVQLRRDETYADVKPVRANDAGPSAFVSIMRGCNNMCAFCI 195
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG----MEKEVEPGAN 308
VPFTRGRERSRP SIV EV L EG KEV LLGQNVNSY D SG + P
Sbjct: 196 VPFTRGRERSRPRASIVDEVKRLVDEGRKEVVLLGQNVNSYADASGAFYLTLVPIRP--- 252
Query: 309 WRLSEGFNSMCKV---KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
S GF S+ K ++ L FA+LLD ++ PEMR R+TSPHPKDFPD++L ++ R
Sbjct: 253 --RSRGFKSVYKPGARRENALLFAELLDEVAGVDPEMRVRFTSPHPKDFPDDVLNVIASR 310
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI---CGFCG 422
PNVCK +H+PAQ+G++ VLERMRRGYTREAY+DLV++ R+ +P V +SSDFI GFCG
Sbjct: 311 PNVCKQLHMPAQSGSTTVLERMRRGYTREAYVDLVRRARERVPGVAVSSDFIRRVFGFCG 370
Query: 423 ETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRE 482
ETE+EHADT++LM + Y+ A+MFAYSMRE+T A R+ VDDVPEE K+RRL E+I A R
Sbjct: 371 ETEDEHADTVSLMNLMRYEQAFMFAYSMREKTAASRHLVDDVPEETKKRRLAEVIAAQRR 430
Query: 483 STGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
+ ++G LVL+EG +K++ D E G++ G RV
Sbjct: 431 GAEERNADEIGVTHLVLIEGTSKRS-DAEYTGRTCTGKRV 469
>gi|312084023|ref|XP_003144103.1| hypothetical protein LOAG_08525 [Loa loa]
Length = 568
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/515 (48%), Positives = 341/515 (66%), Gaps = 34/515 (6%)
Query: 15 QLKRSFSLNLSRNFSHSSLDLPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVH 74
Q+K S SL R+ + DGPGL +F+++++ S+ L+ + P E + S
Sbjct: 18 QIKSSVSLTRKRSLKFN----IDGPGLDYFVSKAN---SERLSKVMPKVEEMYGSLSTTA 70
Query: 75 SQG---RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
S G ++ TYGCQMNVND+E+V S++ ++GY E +V E A+++ + TC+IR+ AE+
Sbjct: 71 SYGDGLKVKFITYGCQMNVNDVELVRSLLLSSGYMETDDVKE-ADIVLLMTCSIREGAEN 129
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGP 191
KVW L ++R KK V + VLGCMAER++ +L + VDVV GP
Sbjct: 130 KVWDELKVLRKIRR--KKGV------------VGVLGCMAERVRHNLLTYTENVDVVAGP 175
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
D+YRDLPRLL G IN LSLEETYADI PVR K S TAFVS+MRGC+NMC++C
Sbjct: 176 DSYRDLPRLLAIARCGSMAINVQLSLEETYADIVPVRKDKFSKTAFVSIMRGCDNMCTYC 235
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKE----VEPGA 307
+VP+TRGRERSRP+ SI+ E+ L EGVK+VTLLGQNVNSY D S + EPG
Sbjct: 236 VVPYTRGRERSRPINSILDEIRSLSDEGVKQVTLLGQNVNSYRDLSEISFPSACLTEPGT 295
Query: 308 NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
+ GF + K KK G F LLD++S PEMR R+TSPHPKDFP E++ ++++R N
Sbjct: 296 ----APGFRTKYKPKKGGRTFLTLLDKVSQIDPEMRIRFTSPHPKDFPLEVIQLIKERSN 351
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
+CK IHLPAQ+G++AVL+ M RGY+RE+YL+LV +I+ ++P+V L+SDFI GFCGETEE
Sbjct: 352 ICKQIHLPAQSGSNAVLDAMDRGYSRESYLELVDRIKAVLPNVSLTSDFIAGFCGETEES 411
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
H ++L L++ V Y Y+F YS RE+T A+R+ D+V +EVK RR EL FRE+ +
Sbjct: 412 HRESLDLIRHVVYSFCYVFPYSQREKTKAYRHLKDNVSKEVKNRRHQELANVFRETALKH 471
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
++ VGT QLVL+E +K++ + L G+ D G V
Sbjct: 472 NEALVGTEQLVLLEETSKRSSE-HLRGRIDGGVNV 505
>gi|268317612|ref|YP_003291331.1| MiaB family RNA modification protein [Rhodothermus marinus DSM
4252]
gi|262335146|gb|ACY48943.1| RNA modification enzyme, MiaB family [Rhodothermus marinus DSM
4252]
Length = 482
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/457 (52%), Positives = 307/457 (67%), Gaps = 38/457 (8%)
Query: 69 TGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDY 128
T E ++Y ETYGCQMNV+D EIV +I++ GY + PE A+V+ +NTCAIR+
Sbjct: 19 TAEEAEGARKVYIETYGCQMNVSDSEIVAAILRAHGYG-LTRDPEQADVVLLNTCAIREN 77
Query: 129 AEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVV 188
AE KV RL+ F KR+ + + G VLGCMAERL+ K+L+ +++VD+V
Sbjct: 78 AEQKVRHRLDIFRAHKRKQRPGLRIG-----------VLGCMAERLRHKLLEEEQLVDLV 126
Query: 189 CGPDAYRDLPRLLEEVDY-GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 247
GPDAYRDLPRLLEE + GQ +N LS EETYADI+PVR N VTA+VS+MRGC+NM
Sbjct: 127 VGPDAYRDLPRLLEEAETTGQAAVNVQLSREETYADIAPVRYDSNGVTAYVSIMRGCDNM 186
Query: 248 CSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGA 307
C+FC+VPFTRGRERSRPV+SI+ E L +EG +EVT+LGQNVNSY T E G
Sbjct: 187 CAFCVVPFTRGRERSRPVQSILDECARLVEEGYREVTVLGQNVNSYRYT-------ENGT 239
Query: 308 NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
+ F +LL R+SL PE+R RY++ HPKD DELL++ R+R N
Sbjct: 240 V-----------------VTFPELLYRVSLISPELRVRYSTSHPKDCSDELLHVHRERHN 282
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
VC YIHLP Q GN+ VL RMRR YTRE YL LV++ R+I+P + LS+D I GFCGETEEE
Sbjct: 283 VCNYIHLPVQHGNTDVLRRMRRTYTREQYLALVERARRIVPGISLSTDIIAGFCGETEEE 342
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
H DTL+L++ V +D AYMF YS R T+A R Y DDVP EVK+RRL E+IE + +
Sbjct: 343 HRDTLSLLEEVRFDHAYMFMYSERPGTYAARKYKDDVPLEVKKRRLQEIIELQTRISLEN 402
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++G V VLVEGP+K++P+ +L G++D V F
Sbjct: 403 NRKEIGRVHTVLVEGPSKRSPE-QLCGRTDTNKMVVF 438
>gi|393907784|gb|EFO19966.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Loa loa]
Length = 582
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/515 (48%), Positives = 341/515 (66%), Gaps = 34/515 (6%)
Query: 15 QLKRSFSLNLSRNFSHSSLDLPDGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVH 74
Q+K S SL R+ + DGPGL +F+++++ S+ L+ + P E + S
Sbjct: 32 QIKSSVSLTRKRSLKFN----IDGPGLDYFVSKAN---SERLSKVMPKVEEMYGSLSTTA 84
Query: 75 SQG---RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
S G ++ TYGCQMNVND+E+V S++ ++GY E +V E A+++ + TC+IR+ AE+
Sbjct: 85 SYGDGLKVKFITYGCQMNVNDVELVRSLLLSSGYMETDDVKE-ADIVLLMTCSIREGAEN 143
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGP 191
KVW L ++R KK V + VLGCMAER++ +L + VDVV GP
Sbjct: 144 KVWDELKVLRKIRR--KKGV------------VGVLGCMAERVRHNLLTYTENVDVVAGP 189
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
D+YRDLPRLL G IN LSLEETYADI PVR K S TAFVS+MRGC+NMC++C
Sbjct: 190 DSYRDLPRLLAIARCGSMAINVQLSLEETYADIVPVRKDKFSKTAFVSIMRGCDNMCTYC 249
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKE----VEPGA 307
+VP+TRGRERSRP+ SI+ E+ L EGVK+VTLLGQNVNSY D S + EPG
Sbjct: 250 VVPYTRGRERSRPINSILDEIRSLSDEGVKQVTLLGQNVNSYRDLSEISFPSACLTEPGT 309
Query: 308 NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
+ GF + K KK G F LLD++S PEMR R+TSPHPKDFP E++ ++++R N
Sbjct: 310 ----APGFRTKYKPKKGGRTFLTLLDKVSQIDPEMRIRFTSPHPKDFPLEVIQLIKERSN 365
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
+CK IHLPAQ+G++AVL+ M RGY+RE+YL+LV +I+ ++P+V L+SDFI GFCGETEE
Sbjct: 366 ICKQIHLPAQSGSNAVLDAMDRGYSRESYLELVDRIKAVLPNVSLTSDFIAGFCGETEES 425
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
H ++L L++ V Y Y+F YS RE+T A+R+ D+V +EVK RR EL FRE+ +
Sbjct: 426 HRESLDLIRHVVYSFCYVFPYSQREKTKAYRHLKDNVSKEVKNRRHQELANVFRETALKH 485
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
++ VGT QLVL+E +K++ + L G+ D G V
Sbjct: 486 NEALVGTEQLVLLEETSKRSSE-HLRGRIDGGVNV 519
>gi|345302673|ref|YP_004824575.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Rhodothermus marinus SG0.5JP17-172]
gi|345111906|gb|AEN72738.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Rhodothermus marinus SG0.5JP17-172]
Length = 482
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/457 (52%), Positives = 307/457 (67%), Gaps = 38/457 (8%)
Query: 69 TGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDY 128
T E ++Y ETYGCQMNV+D EIV +I++ GY + PE A+V+ +NTCAIR+
Sbjct: 19 TAEEAEGARKVYIETYGCQMNVSDSEIVAAILRAHGYG-LTRDPEQADVVLLNTCAIREN 77
Query: 129 AEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVV 188
AE KV RL+ F KR+ + + G VLGCMAERL+ K+L+ +++VD+V
Sbjct: 78 AEQKVRHRLDIFRAHKRKQRPGLRIG-----------VLGCMAERLRHKLLEEEQLVDLV 126
Query: 189 CGPDAYRDLPRLLEEVDY-GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 247
GPDAYRDLPRLLEE + GQ +N LS EETYADI+PVR N VTA+VS+MRGC+NM
Sbjct: 127 VGPDAYRDLPRLLEEAETTGQAAVNVQLSREETYADIAPVRYDSNGVTAYVSIMRGCDNM 186
Query: 248 CSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGA 307
C+FC+VPFTRGRERSRPV+SI+ E L +EG +EVT+LGQNVNSY T E G
Sbjct: 187 CAFCVVPFTRGRERSRPVQSILDECARLVEEGYREVTVLGQNVNSYRYT-------ENGT 239
Query: 308 NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
+ F +LL R+SL PE+R RY++ HPKD DELL++ R+R N
Sbjct: 240 V-----------------VTFPELLYRVSLISPELRVRYSTSHPKDCSDELLHVHRERHN 282
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
VC YIHLP Q GN+ VL RMRR YTRE YL LV++ R+I+P + LS+D I GFCGETEEE
Sbjct: 283 VCNYIHLPVQHGNTDVLRRMRRTYTREQYLALVERARRIVPGISLSTDIIAGFCGETEEE 342
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
H DTL+L++ V +D AYMF YS R T+A R Y DDVP EVK+RRL E+IE + +
Sbjct: 343 HRDTLSLLEEVRFDHAYMFMYSERPGTYAARKYRDDVPLEVKKRRLQEIIELQTRISLEN 402
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++G V VLVEGP+K++P+ +L G++D V F
Sbjct: 403 NRKEIGRVHTVLVEGPSKRSPE-QLCGRTDTNKMVVF 438
>gi|213514974|ref|NP_001134025.1| CDK5 regulatory subunit-associated protein 1 [Salmo salar]
gi|209156200|gb|ACI34332.1| CDK5 regulatory subunit-associated protein 1 [Salmo salar]
Length = 469
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/430 (53%), Positives = 303/430 (70%), Gaps = 16/430 (3%)
Query: 35 LPDGPGLHHFIAQSSLTASQPLA--DLAPASEVSS-ATGSEVHSQGRIYQETYGCQMNVN 91
+ GP H F+ +S+ QP+ DL + + SE+ + + ETYGCQMNVN
Sbjct: 50 IATGPRFHDFVKGASINKQQPVITDDLIDTDKHAYLPEDSEIGNSRTVCFETYGCQMNVN 109
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ GY +V E A+V+ + TC+IR+ AE +W RL +K+
Sbjct: 110 DTEIAWSILQKKGYQRTSDVAE-ADVVLLVTCSIREKAEQTIWNRLRQLTAMKKR----- 163
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
R +++ P KI VLGCMAERLK ++L+ +K++DV+ GPDAYRDLPRLL GQ+
Sbjct: 164 ---RLKTRVPMKIGVLGCMAERLKSELLEREKLLDVLAGPDAYRDLPRLLSVAHGGQQAS 220
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSLEETYAD+ PV S ++AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI++E
Sbjct: 221 NVLLSLEETYADVMPVHHSPQGLSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVSSILEE 280
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEK-EVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
V L ++GVKEVT+LGQNVNSY DTS + EPG +LS GF ++ + + GLRFAD
Sbjct: 281 VHILSEQGVKEVTMLGQNVNSYRDTSEEQFCSSEPG---QLSRGFRTVYRARPGGLRFAD 337
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLDR+SL P+MR R+TSPHPKDFPDE+L ++++R N+CK +HLPAQ+G+S VL+ MRRG
Sbjct: 338 LLDRVSLIDPDMRIRFTSPHPKDFPDEVLQLIKERANICKQVHLPAQSGSSTVLQAMRRG 397
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAYL+LV I+ IIP V LSSDFI GFCGETEE+H TL+L++ V Y++ ++FAYSM
Sbjct: 398 YSREAYLELVDNIKTIIPGVSLSSDFISGFCGETEEDHLQTLSLIREVRYNVGFLFAYSM 457
Query: 451 RERTHAHRNY 460
R+ Y
Sbjct: 458 RKVRSTQLTY 467
>gi|219116801|ref|XP_002179195.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409086|gb|EEC49018.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 516
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/463 (50%), Positives = 328/463 (70%), Gaps = 33/463 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ + T+GCQMNVND +IV +++ G++E ++ +A+V+ NTCAIR+ AE KVW RL
Sbjct: 5 KFHLRTFGCQMNVNDSDIVRALLLERGFTETLD-ETDADVLLTNTCAIREGAEQKVWHRL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
RE + G+ +S+ K+V VLGCMAERL+ + D + D+V GPDAYRD
Sbjct: 64 -------RELR-----GKFKSR---KVVGVLGCMAERLQTDLF-RDGLADLVVGPDAYRD 107
Query: 197 LPRLL---------EEVDYGQ--KGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCN 245
LPRL+ ++ + G+ + N LSL+ETYAD++PVR NSV+AFVS+ RGC
Sbjct: 108 LPRLMRDLLREPDDDDAELGRVNQAFNVQLSLDETYADVTPVRRHGNSVSAFVSIQRGCA 167
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
N CSFCIVPFTRG+ERSRP S+V E+ +L+++GVKEVTLLGQNVNSY+DTS V P
Sbjct: 168 NRCSFCIVPFTRGQERSRPFASVVGEIQQLYEQGVKEVTLLGQNVNSYHDTSETALSVRP 227
Query: 306 GANWRLS-EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRD 364
+ +R+S +GF S + G FADL+ +S E+R R+TSPHPKD+P LL +M +
Sbjct: 228 DSGYRMSNDGFRSRIRRHDGGYYFADLVAAVSDISSELRVRFTSPHPKDYPPPLLTLMAE 287
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
RPNVC ++H+PAQ+G++++L+RM+RGY+REAYL+L+ + +IIPDV +SSDFI GFC E+
Sbjct: 288 RPNVCNHLHMPAQSGSTSMLQRMKRGYSREAYLELMDTVHEIIPDVAISSDFIAGFCDES 347
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
EEEH DTL+LM+ V YD A+MFAYSMR +THAHR D+VPE+VK+RRL E+I+ F+
Sbjct: 348 EEEHLDTLSLMERVRYDQAFMFAYSMRGKTHAHRTMQDNVPEDVKKRRLIEIIDTFQRHV 407
Query: 485 GQCYDS-QVGTVQLVLVEGPNKKA-PDTEL-VGKSDRGHRVAF 524
+ +S +VG ++LVLVEG +K++ P G++D+ R+ F
Sbjct: 408 QEKNESLEVGRLRLVLVEGESKRSHPGARAWQGRTDQNKRIIF 450
>gi|322795992|gb|EFZ18616.1| hypothetical protein SINV_04486 [Solenopsis invicta]
Length = 503
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/374 (57%), Positives = 287/374 (76%), Gaps = 9/374 (2%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y + YGCQMN ND +I+ S++K+ GY E+A+++ + TCAIRD AE K+W +L
Sbjct: 125 VYFKIYGCQMNENDADIIWSVLKSHGYKHT-QYLEDADIVLLITCAIRDNAEQKIWNKLE 183
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
++ + K+ TGRS KI +LGCMAERLK KILD K+VDV+ GPD+Y+DLP
Sbjct: 184 NLNGIRNKIKR--ITGRSM-----KIGLLGCMAERLKTKILDRGKLVDVIAGPDSYKDLP 236
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
RLL D + IN +LS +ETYAD++P+R++++S A+VS+MRGC+NMC++CIVPFTRG
Sbjct: 237 RLLAVTD-NETAINVVLSFDETYADVTPIRLNQDSTGAYVSIMRGCDNMCTYCIVPFTRG 295
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERSRPV SI++EV +L +GVKE+TLLGQNVNSY D S E + + L++GF ++
Sbjct: 296 RERSRPVASILEEVRQLSDQGVKEITLLGQNVNSYRDLSKSEFVLSVNTDTHLAKGFKTV 355
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
K KK GLRF+DLLD++SL PE+R R+TSPHPKDFPDE+L+++ +RPN+CK IHLPAQ+
Sbjct: 356 YKNKKGGLRFSDLLDQVSLINPEIRIRFTSPHPKDFPDEVLHLIAERPNICKQIHLPAQS 415
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
GNS +LERMRRGYTREAYLDLV IR I+P++ SSDFI GFCGETEE+ DTL+L++ V
Sbjct: 416 GNSIILERMRRGYTREAYLDLVYHIRDILPNINFSSDFIAGFCGETEEQFQDTLSLIEEV 475
Query: 439 GYDMAYMFAYSMRE 452
Y+ AY+FAYSMRE
Sbjct: 476 KYNCAYLFAYSMRE 489
>gi|428170373|gb|EKX39298.1| hypothetical protein GUITHDRAFT_160013 [Guillardia theta CCMP2712]
Length = 476
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/441 (50%), Positives = 312/441 (70%), Gaps = 24/441 (5%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFL---- 143
MN +D EIV SIM+++GY V PENA V+ NTCA+R+ AE KVW+RL +
Sbjct: 1 MNSSDSEIVASIMQSSGYHRV-EQPENANVLMFNTCAVRENAEQKVWERLKKIKSMLDHH 59
Query: 144 -KREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
R W++ + G VLGCMAERLK K+L+ D++VD V GPDAYRD+P LL
Sbjct: 60 PDRRWRQRASVG-----------VLGCMAERLKKKLLETDRLVDFVAGPDAYRDIPNLLN 108
Query: 203 EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERS 262
V+ GQK +N LSL+ETYAD++PVR N ++A++S+MRGCNNMCS+C+VPFTRGRERS
Sbjct: 109 TVESGQKAMNVQLSLDETYADVAPVRYDGNGISAYISIMRGCNNMCSYCVVPFTRGRERS 168
Query: 263 RPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV----EPGANWRLSEGFNSM 318
R +ESIV EV +L +G +E+TLLGQNVNSY D + E V A + GFN++
Sbjct: 169 RTLESIVNEVKDLSAKGYREITLLGQNVNSYWDQTFSEGSVLCPKRIRAGYVSYPGFNNI 228
Query: 319 CKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G RF DLLD++S +R R+TSPHPKDFP +LL ++ +RPN+CK +H+PAQ
Sbjct: 229 YKSRHGSGARFIDLLDQVSAVDSRIRIRFTSPHPKDFPPQLLQLIAERPNLCKSLHMPAQ 288
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+++VL RMRRGYTREAY+ L+++ ++ IP + +S+D I GFCGETEEEH +TL+L++
Sbjct: 289 SGSTSVLARMRRGYTREAYMQLIEEAQKTIPGLSISTDIITGFCGETEEEHQETLSLLEE 348
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V + A+M+AYS R THA N DDVP+E+K RRL E+I+ FR++ + +++G +
Sbjct: 349 VKFYQAFMYAYSERSHTHAKHNMPDDVPQEIKSRRLQEIIDTFRKNAAESCLNELGKEHV 408
Query: 498 VLVEGPNKK-APDT-ELVGKS 516
VL++GP+K+ +P+ +LVG++
Sbjct: 409 VLIDGPSKRSSPEMPQLVGRT 429
>gi|397611229|gb|EJK61235.1| hypothetical protein THAOC_18317 [Thalassiosira oceanica]
Length = 652
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 250/508 (49%), Positives = 323/508 (63%), Gaps = 69/508 (13%)
Query: 66 SSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIM---------KNAGYSEVINVPE--- 113
+ G H + + +TYGCQMNVND +IV SI+ ++ G S P
Sbjct: 33 AEGAGLRRHHTLKFHLKTYGCQMNVNDTDIVRSILLDNHKETSREHGGASGGDGPPPLRF 92
Query: 114 -------NAEVIFINTCAIRDYAEHKVWQRLNYFWFLKR--------------------E 146
A+V+ NTCAIRD AE KVWQRL+ R E
Sbjct: 93 EEVADEVQADVLLTNTCAIRDNAERKVWQRLHTLRAHDRNFPLDGDDGTKGDGLMGRTKE 152
Query: 147 WKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE--- 202
+K GR + +I+ VLGCMAERLK+ + + DVV GPDAYRDLPRL+
Sbjct: 153 ARKQAQAGRRGGRK--RIIGVLGCMAERLKEDMFE-QGTADVVVGPDAYRDLPRLISVLA 209
Query: 203 -------EVDYGQKG---------INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNN 246
+ D G +G +N LSL+ETYA I+PVR + + V+AFVSVMRGCNN
Sbjct: 210 APSLPNRDGDSGTQGAPSIPTERAVNVQLSLDETYASITPVRANPDDVSAFVSVMRGCNN 269
Query: 247 MCSFCIVPFTRGRERSRPVESIVKEVDELW-KEGVKEVTLLGQNVNSYNDT-SGMEKEVE 304
MCS+C+VPFTRGRERSR +ES+V E L +EG++EV LLGQNVNSY+D G + V
Sbjct: 270 MCSYCVVPFTRGRERSRDLESVVGETRRLLDEEGIREVILLGQNVNSYHDGRGGRSRNVS 329
Query: 305 --PGANWRLS-EGFNSMCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
G +R S +GF+++ + + G RFADLL+ +S PE+R R+TSPHPKD+P ELL
Sbjct: 330 NGDGGTYRTSNDGFSNVFRARHGGGHRFADLLEAVSSLSPELRVRFTSPHPKDYPPELLS 389
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
+M +RPNVC ++H+PAQ+G+SAVLERMRRGY+REAYLDL+ R IP V +SSDFI GF
Sbjct: 390 LMAERPNVCSHLHMPAQSGSSAVLERMRRGYSREAYLDLIADARSAIPGVSISSDFIAGF 449
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGETE EH +TL+LMK V YD A+MFAYSMR RTHAHR DDVPE+VK RRL+E+I+ F
Sbjct: 450 CGETEAEHLETLSLMKEVRYDQAFMFAYSMRGRTHAHRTMADDVPEDVKARRLSEVIDVF 509
Query: 481 REST-GQCYDSQVGTVQLVLVEGPNKKA 507
R + + + +VGT +LVLVEG +K++
Sbjct: 510 RRNVQARNEEVEVGTARLVLVEGESKRS 537
>gi|17553146|ref|NP_498290.1| Protein F25B5.5 [Caenorhabditis elegans]
gi|2501544|sp|Q09316.1|CK5P1_CAEEL RecName: Full=CDK5RAP1-like protein
gi|373219554|emb|CCD68781.1| Protein F25B5.5 [Caenorhabditis elegans]
Length = 547
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/493 (47%), Positives = 319/493 (64%), Gaps = 23/493 (4%)
Query: 37 DGPGLHHFIAQSSLTASQPLADLAPASEVSSA--TGSEVHSQGR-IYQETYGCQMNVNDM 93
DG L FI +S T Q + P+ E + ++ GR + TYGCQMNV+DM
Sbjct: 38 DGLQLSDFIKES--TKKQRQKAIIPSIEDTKEYLNPEDLQGNGRTVCYVTYGCQMNVSDM 95
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
EIV SIM G+ E + ENA+++ + TC+IRD AE KVW +L
Sbjct: 96 EIVRSIMTKYGFVES-DKKENADIVLLMTCSIRDGAEKKVWNQLKLI------------- 141
Query: 154 GRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 212
RS S + +IV VLGCMAER++ +L+ +V++V GPD+YRDLPRL+ G GIN
Sbjct: 142 -RSNSVNKGQIVGVLGCMAERVRHDLLEKRNLVNIVAGPDSYRDLPRLVAVAAGGSNGIN 200
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LSL+ETYAD+ P+R+ S TAF+S+MRGC+NMC++C+VPFTRGRERSRP+ESIV+EV
Sbjct: 201 VQLSLDETYADVQPIRVDSASKTAFISIMRGCDNMCTYCVVPFTRGRERSRPIESIVEEV 260
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR-LSEGFNSMCKVKKMGLRFADL 331
L +G K+VTLLGQNVNSY D + M+ + P + GF ++ K K GL F L
Sbjct: 261 QRLRDQGYKQVTLLGQNVNSYRDMTSMDFSMAPSTSQEDRVPGFKTVYKPKSGGLTFTTL 320
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
L++++ P++RFR+TSPHPKDFP +L+ ++ RPN+CK +HLPAQ+G+ LERM RGY
Sbjct: 321 LEKVADAAPDIRFRFTSPHPKDFPMQLIELIASRPNLCKQLHLPAQSGDDETLERMERGY 380
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
TR+ YL LV IR ++P V L+SDFI GFCGETE+ H +TL+L++AV Y ++F YSMR
Sbjct: 381 TRDLYLRLVDDIRHVLPSVSLTSDFIAGFCGETEQAHQNTLSLIRAVRYSFCFVFPYSMR 440
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
+T AH DDVPE+VK RR +L FRE + + +G+ Q VL+EG +K+
Sbjct: 441 GKTRAHHRLTDDVPEDVKARRHLDLTTVFREEALKLNQALIGSEQTVLLEGKSKRDASFS 500
Query: 512 LVGKSDRGHRVAF 524
G+ D G + F
Sbjct: 501 H-GRIDGGVKAVF 512
>gi|402591697|gb|EJW85626.1| CDK5 regulatory subunit-associated protein 1 [Wuchereria bancrofti]
Length = 1106
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/490 (49%), Positives = 331/490 (67%), Gaps = 35/490 (7%)
Query: 37 DGPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIV 96
DGPGL +FI+++S ++ L+ + P E + I TYGCQMN+ND+E+V
Sbjct: 599 DGPGLDYFISKAS---NERLSKVIPRVEE--------MDESLIKFITYGCQMNINDVELV 647
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRS 156
S++ ++GY E +V E A++I + TC+IR+ AE+KVW L ++R KK V
Sbjct: 648 RSLLLSSGYVETDDVKE-ADIILLMTCSIREGAENKVWDELKVLRKIRR--KKGV----- 699
Query: 157 QSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLS 216
+ VLGCMAER++ +L + VDVV GPD+YRDLPRLL G IN LS
Sbjct: 700 -------VGVLGCMAERVRHNLLTCTENVDVVAGPDSYRDLPRLLAIARCGSMAINVQLS 752
Query: 217 LEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELW 276
LEETYAD+ PVR K S TAFVS+MRGC+NMC++CIVP+TRGRERSRP+ SI+ E+ L
Sbjct: 753 LEETYADVVPVRKDKFSKTAFVSIMRGCDNMCTYCIVPYTRGRERSRPMNSILDEIRRLS 812
Query: 277 KEGVKEVTLLGQNVNSYNDTSGME----KEVEPGANWRLSEGFNSMCKVKKMGLRFADLL 332
EGVK+VTLLGQNVNSY D S + VEPG ++ GF + K K+ G F LL
Sbjct: 813 DEGVKQVTLLGQNVNSYRDLSEISFLSASFVEPG----VAPGFRTKYKPKRGGYTFLTLL 868
Query: 333 DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYT 392
D++S EMR R+TSPHPKDFP E++ ++++RPN+CK IHLPAQ+G++ VL+ M RGY+
Sbjct: 869 DKVSQIDSEMRIRFTSPHPKDFPLEVIQLIKERPNICKQIHLPAQSGSNIVLDAMDRGYS 928
Query: 393 REAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRE 452
RE+YL+LV +I+ ++P+V L+SDFI GFCGETEE H ++L L+K V Y Y+F YS RE
Sbjct: 929 RESYLELVDRIKTVLPNVSLTSDFIAGFCGETEECHRESLDLIKHVVYSFCYVFPYSQRE 988
Query: 453 RTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+T A+R+ DDVP+EVK RR EL AFRE+ + ++ VGT QLVL+E +K++ + L
Sbjct: 989 KTKAYRHLRDDVPKEVKDRRHQELASAFRETALKHNEALVGTKQLVLLEETSKRSSE-HL 1047
Query: 513 VGKSDRGHRV 522
G+ D G V
Sbjct: 1048 RGRIDGGVSV 1057
>gi|255036486|ref|YP_003087107.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Dyadobacter
fermentans DSM 18053]
gi|254949242|gb|ACT93942.1| RNA modification enzyme, MiaB family [Dyadobacter fermentans DSM
18053]
Length = 489
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/485 (48%), Positives = 321/485 (66%), Gaps = 32/485 (6%)
Query: 41 LHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIM 100
+ H IA S ++ AD V + + + R++ E+YGCQMN +D EIV S+M
Sbjct: 1 MEHRIADSLKILTE--ADKEACETVRVSENEPLSGKKRLFIESYGCQMNFSDSEIVASVM 58
Query: 101 KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKH 160
++AG++ +V +A++IF+NTCAIRD AE KV RL FLK+ +K
Sbjct: 59 RDAGFATTSDV-NDADLIFLNTCAIRDNAEQKVRNRLKQLNFLKK------------NKP 105
Query: 161 PPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEET 220
I VLGCMAERLK K L+ +KMVD+V GPDAYRDLPRL++E + GQKG+N LS EET
Sbjct: 106 GMLIGVLGCMAERLKTKFLEEEKMVDIVTGPDAYRDLPRLVDEAETGQKGVNVFLSREET 165
Query: 221 YADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGV 280
YADISP+R++ N VTAF+S+MRGC+NMCSFC+VPFTRGRERSR SIVKE ++L+++G
Sbjct: 166 YADISPIRLNSNGVTAFISIMRGCDNMCSFCVVPFTRGRERSRDPYSIVKEAEDLFRDGY 225
Query: 281 KEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFP 340
+EVTLLGQNV+SY W+ E + + FA LL+ ++ P
Sbjct: 226 REVTLLGQNVDSY--------------KWK-PEATAEGGLTGETIVNFAHLLEMVAKVSP 270
Query: 341 EMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLV 400
E+R R+++ HPKD DE+LY M+ N+CKYIHLPAQ+GN+ VLE M R YTRE Y++ +
Sbjct: 271 ELRIRFSTSHPKDITDEVLYTMKKYDNICKYIHLPAQSGNTRVLEIMNRTYTREWYMERI 330
Query: 401 QKIRQIIPD-VGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRN 459
IR+I+ D G+S D I GFC ETEEEH DTL+LM+ +D +MFAYS R T A +
Sbjct: 331 DAIRRILGDECGISQDMIAGFCTETEEEHRDTLSLMEYAKFDFGFMFAYSERPGTLAAKK 390
Query: 460 YVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRG 519
+ DD+PE+VK+RRL E+IE + + VGT+Q VL+EG +K++ D +L G++D+
Sbjct: 391 FKDDIPEDVKKRRLAEIIEVQQRLSLARNQQLVGTIQRVLIEGTSKRSDD-DLSGRNDQN 449
Query: 520 HRVAF 524
+V F
Sbjct: 450 KKVVF 454
>gi|324508033|gb|ADY43398.1| CDK5RAP1-like protein [Ascaris suum]
Length = 584
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/493 (49%), Positives = 318/493 (64%), Gaps = 27/493 (5%)
Query: 35 LPDGPGLHHFI-----AQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMN 89
LP GP L +FI QS + S +D + E S +V TYGCQMN
Sbjct: 53 LPGGPDLKYFITAAKNGQSKIIPSVTESDTYLSKEDYSGENRKVKFI------TYGCQMN 106
Query: 90 VNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKK 149
VNDME V SI+ Y EV + A+V+ + TC+IR+ AE KVW+ L L+R K
Sbjct: 107 VNDMETVRSILFANKYLEVDD-ERKADVVLLMTCSIREGAEEKVWRVLKK---LRRSANK 162
Query: 150 NVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQK 209
G VLGCMAER++ K+L VDVV GPD+YRDLPRLL G+
Sbjct: 163 QQTVG-----------VLGCMAERVRHKLLQEANAVDVVAGPDSYRDLPRLLAVTRTGRS 211
Query: 210 GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
IN LSLEETYAD++PVR+ + +AFVS+MRGC+NMC++CIVPFTRGRERSRP+ SIV
Sbjct: 212 AINVQLSLEETYADVTPVRLDPMAKSAFVSIMRGCDNMCTYCIVPFTRGRERSRPLRSIV 271
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
EV L +G K+V LLGQNVNSY DTS + L+ GF ++ K KK GL FA
Sbjct: 272 DEVKRLSYQGYKQVVLLGQNVNSYRDTSEATYVSCGIDDSGLAPGFKTIYKPKKSGLNFA 331
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
LL+R+S PEMR R+TSPHPKDF +++ ++++R N+CK IHLPAQ+G++ VLE M R
Sbjct: 332 TLLERVSDVDPEMRIRFTSPHPKDFSFQVIELIKERTNICKQIHLPAQSGSNTVLEAMGR 391
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GYTRE+YL LV +IRQ+IP+V L+SDFI GFCGETE +H TL L++ V Y Y+F YS
Sbjct: 392 GYTRESYLALVDQIRQLIPEVSLTSDFIAGFCGETERDHQQTLDLIRRVKYSFCYVFPYS 451
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MRE+T A + DDVP EVK+RR EL + FR + + VG+ QLVL+E +K++
Sbjct: 452 MREKTRASYHLKDDVPIEVKRRRHEELAQVFRGEALKTNAALVGSKQLVLIESRSKRSA- 510
Query: 510 TELVGKSDRGHRV 522
T + G++D G +V
Sbjct: 511 TAVAGRADGGAKV 523
>gi|229890670|sp|Q2RZF8.2|MIAB_SALRD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
Length = 503
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/448 (50%), Positives = 295/448 (65%), Gaps = 37/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNVND IV S+++ +GY + A+V+ +NTCAIR+ AE K+ RL
Sbjct: 43 QVYIETYGCQMNVNDSGIVASVLEESGYG-LTRDQAAADVVLLNTCAIRENAERKIRARL 101
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ K + + G VLGCMAERL++K+L+ + +VDVV GPDAYRDL
Sbjct: 102 SMLRSEKEKRDGELMLG-----------VLGCMAERLREKLLEQEDLVDVVVGPDAYRDL 150
Query: 198 PRLLEEVD-YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+LL E D GQ +N LS +ETY DI PVR N V+A+VS+MRGC+NMC+FC+VPFT
Sbjct: 151 PQLLYEADATGQAAVNVELSKQETYEDIQPVRYDSNGVSAYVSIMRGCDNMCTFCVVPFT 210
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE SRPV +I+ EV L +EG KEVTLLGQNVNSY+ T
Sbjct: 211 RGREESRPVTTILSEVARLAEEGYKEVTLLGQNVNSYHYTDA------------------ 252
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ FA+L+DR+S PEMR RY++ HPKD D+LL + RDRPNVC YIHLP
Sbjct: 253 -----DGTSVSFAELVDRVSRVSPEMRVRYSTSHPKDCTDDLLKVHRDRPNVCNYIHLPV 307
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q GN+ VL+RMRR YTRE YL L ++ +++ P V LS+D I GFCGETE +H DTL+LM+
Sbjct: 308 QHGNTEVLDRMRRTYTREEYLALTERAKELCPGVSLSTDLIAGFCGETEAQHEDTLSLME 367
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD AYMF YS R +T+A R Y DDVPE+ KQRRL E+IE + + +++VG V
Sbjct: 368 EVRYDHAYMFKYSERPQTYAARKYEDDVPEDTKQRRLEEIIELQNQHAKESNEAEVGRVH 427
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK+ D + G++D V F
Sbjct: 428 TVLVEGPSKKS-DAQFFGRTDTNKGVVF 454
>gi|224008014|ref|XP_002292966.1| hypothetical protein THAPSDRAFT_263872 [Thalassiosira pseudonana
CCMP1335]
gi|220971092|gb|EED89427.1| hypothetical protein THAPSDRAFT_263872 [Thalassiosira pseudonana
CCMP1335]
Length = 494
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/464 (50%), Positives = 323/464 (69%), Gaps = 29/464 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ + +TYGCQMNVND +IV S ++ ++ I A+++ NTCAIR+ AE KVW RL
Sbjct: 2 KFHIKTYGCQMNVNDTDIVQSSLQFIETTDEIQ----ADILLTNTCAIRENAESKVWHRL 57
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
RE + + S +I+ VLGCMAERLK+ + D D+V GPD+YRD
Sbjct: 58 -------RELRSHDRNYPLSSVGDERIIGVLGCMAERLKEDMF-QDGTADLVVGPDSYRD 109
Query: 197 LPRLLEEVDY-------GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
LPRL+ ++ ++ +N LSL+ETYA I P+R + N V+AFVS+MRGCNNMCS
Sbjct: 110 LPRLISVLNAPATGTLPTERAVNVQLSLDETYASIKPIRSNPNDVSAFVSIMRGCNNMCS 169
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKE-GVKEVTLLGQNVNSYNDTSGMEKE---VEP 305
+C+VPFTRGRERSR +E++V E L +E G+KEV LLGQNVNSY+D +++ V+
Sbjct: 170 YCVVPFTRGRERSRGLENVVDETRRLVEEEGIKEVILLGQNVNSYHDIGDRKRKKQLVDD 229
Query: 306 GANWRLSE-GFNSMCKVKKM-GLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMR 363
+++ S GF++M +++ G RF DLLD +SL PE+R R+TSPHPKD+P LL +M
Sbjct: 230 DKSYQTSNPGFSNMFRLRNGDGHRFLDLLDAVSLLSPELRVRFTSPHPKDYPPPLLTLMA 289
Query: 364 DRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGE 423
+RPN+C ++H+PAQ+G+S+VLERMRRGYTREAYL+L+ +R++IPDV +SSDFI GFCGE
Sbjct: 290 ERPNICSHLHMPAQSGSSSVLERMRRGYTREAYLELIDDVRRLIPDVAISSDFITGFCGE 349
Query: 424 TEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRES 483
TEEEH DTL+LM+ V +D A+MFAYSMR +THAHR+ DDV EVKQRRL E+I FR
Sbjct: 350 TEEEHQDTLSLMEQVQFDQAFMFAYSMRGKTHAHRSMEDDVLPEVKQRRLNEVITVFRIE 409
Query: 484 TGQCYDS-QVGTVQLVLVEGPNKKAP--DTELVGKSDRGHRVAF 524
+ D +VG ++LVLVEG K++ + G++D+ RV F
Sbjct: 410 VQRRNDEVEVGKLRLVLVEGEAKRSTPGNRAWSGRTDQNKRVVF 453
>gi|83815966|ref|YP_446673.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salinibacter ruber DSM
13855]
gi|83757360|gb|ABC45473.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Salinibacter ruber DSM
13855]
Length = 572
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/448 (50%), Positives = 295/448 (65%), Gaps = 37/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNVND IV S+++ +GY + A+V+ +NTCAIR+ AE K+ RL
Sbjct: 112 QVYIETYGCQMNVNDSGIVASVLEESGYG-LTRDQAAADVVLLNTCAIRENAERKIRARL 170
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ K + + G VLGCMAERL++K+L+ + +VDVV GPDAYRDL
Sbjct: 171 SMLRSEKEKRDGELMLG-----------VLGCMAERLREKLLEQEDLVDVVVGPDAYRDL 219
Query: 198 PRLLEEVD-YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+LL E D GQ +N LS +ETY DI PVR N V+A+VS+MRGC+NMC+FC+VPFT
Sbjct: 220 PQLLYEADATGQAAVNVELSKQETYEDIQPVRYDSNGVSAYVSIMRGCDNMCTFCVVPFT 279
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE SRPV +I+ EV L +EG KEVTLLGQNVNSY+ T
Sbjct: 280 RGREESRPVTTILSEVARLAEEGYKEVTLLGQNVNSYHYTDA------------------ 321
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ FA+L+DR+S PEMR RY++ HPKD D+LL + RDRPNVC YIHLP
Sbjct: 322 -----DGTSVSFAELVDRVSRVSPEMRVRYSTSHPKDCTDDLLKVHRDRPNVCNYIHLPV 376
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q GN+ VL+RMRR YTRE YL L ++ +++ P V LS+D I GFCGETE +H DTL+LM+
Sbjct: 377 QHGNTEVLDRMRRTYTREEYLALTERAKELCPGVSLSTDLIAGFCGETEAQHEDTLSLME 436
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD AYMF YS R +T+A R Y DDVPE+ KQRRL E+IE + + +++VG V
Sbjct: 437 EVRYDHAYMFKYSERPQTYAARKYEDDVPEDTKQRRLEEIIELQNQHAKESNEAEVGRVH 496
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK+ D + G++D V F
Sbjct: 497 TVLVEGPSKKS-DAQFFGRTDTNKGVVF 523
>gi|294508608|ref|YP_003572667.1| 2-methylthioadenine synthetase [Salinibacter ruber M8]
gi|294344937|emb|CBH25715.1| 2-methylthioadenine synthetase [Salinibacter ruber M8]
Length = 613
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/448 (50%), Positives = 295/448 (65%), Gaps = 37/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNVND IV S+++ +GY + A+V+ +NTCAIR+ AE K+ RL
Sbjct: 153 QVYIETYGCQMNVNDSGIVASVLEESGYG-LTRDQAAADVVLLNTCAIRENAERKIRARL 211
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ K + + G VLGCMAERL++K+L+ + +VDVV GPDAYRDL
Sbjct: 212 SMLRSEKEKRDGELMLG-----------VLGCMAERLREKLLEQEDLVDVVVGPDAYRDL 260
Query: 198 PRLLEEVD-YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+LL E D GQ +N LS +ETY DI PVR N V+A+VS+MRGC+NMC+FC+VPFT
Sbjct: 261 PQLLYEADATGQAAVNVELSKQETYEDIQPVRYDSNGVSAYVSIMRGCDNMCTFCVVPFT 320
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE SRPV +I+ EV L +EG KEVTLLGQNVNSY+ T
Sbjct: 321 RGREESRPVTTILSEVARLAEEGYKEVTLLGQNVNSYHYTDA------------------ 362
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ FA+L+DR+S PEMR RY++ HPKD D+LL + RDRPNVC YIHLP
Sbjct: 363 -----DGTSVSFAELVDRVSRVSPEMRVRYSTSHPKDCTDDLLKVHRDRPNVCNYIHLPV 417
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q GN+ VL+RMRR YTRE YL L ++ +++ P V LS+D I GFCGETE +H DTL+LM+
Sbjct: 418 QHGNTEVLDRMRRTYTREEYLALTERAKELCPGVSLSTDLIAGFCGETEAQHEDTLSLME 477
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD AYMF YS R +T+A R Y DDVPE+ KQRRL E+IE + + +++VG V
Sbjct: 478 EVRYDHAYMFKYSERPQTYAARKYEDDVPEDTKQRRLEEIIELQNQHAKESNEAEVGRVH 537
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK+ D + G++D V F
Sbjct: 538 TVLVEGPSKKS-DAQFFGRTDTNKGVVF 564
>gi|341879805|gb|EGT35740.1| hypothetical protein CAEBREN_28830 [Caenorhabditis brenneri]
Length = 538
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/494 (47%), Positives = 315/494 (63%), Gaps = 24/494 (4%)
Query: 35 LP-DGPGLHHFIAQSSLTASQPLADLAPASEVSSA--TGSEVHSQGR-IYQETYGCQMNV 90
LP DG L FI +SS Q + P+ E + +++ GR + TYGCQMNV
Sbjct: 30 LPEDGLQLSDFIKESSRKQRQKA--IIPSIEDTKEYLNPEDLNGNGRTVCYVTYGCQMNV 87
Query: 91 NDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKN 150
+DMEIV SIM G+ E E A+++ + TC+IRD AE KVW +L +
Sbjct: 88 SDMEIVRSIMTKYGFVET-EQKEKADIVLLMTCSIRDGAEKKVWNQLKLI--------RG 138
Query: 151 VATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG 210
A R Q + VLGCMAER++ +L+ +V +V GPD+YRDLPRL+ G
Sbjct: 139 NAVNRRQI-----VGVLGCMAERVRHGLLEKRNLVHLVAGPDSYRDLPRLVAVATGGSNA 193
Query: 211 INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
IN LSL+ETYAD+ P+R++ S TAF+S+MRGC+NMC++C+VPFTRGRERSRP++SIV+
Sbjct: 194 INVQLSLDETYADVQPIRVNAESKTAFISIMRGCDNMCTYCVVPFTRGRERSRPIDSIVE 253
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
EV L +G K++TLLGQNVNSY D S M+ GF ++ K K GL F
Sbjct: 254 EVRILRNQGYKQITLLGQNVNSYRDMSSMDFASTSSEGV---PGFKTVYKPKTGGLTFTT 310
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LL+++S P++RFR+TSPHPKDFP +L+ ++ R N+CK +HLPAQ+G+ LERM RG
Sbjct: 311 LLEKVSDVAPDVRFRFTSPHPKDFPMQLIELIASRSNLCKQLHLPAQSGDDETLERMGRG 370
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
YTR+ YL LV IRQI+P+V L+SDFI GFCGETEE H +TL+L++AV Y ++F YSM
Sbjct: 371 YTRDLYLRLVDDIRQILPNVSLTSDFIAGFCGETEEAHQNTLSLIQAVRYSFCFVFPYSM 430
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R +T AH DDVPEEVK RR +L FRE + + +GT Q VL+EG +++
Sbjct: 431 RGKTRAHHRLTDDVPEEVKNRRHLDLTTVFREEALKLNQALIGTQQTVLIEGKSRRDESF 490
Query: 511 ELVGKSDRGHRVAF 524
G+ D G + F
Sbjct: 491 SF-GRIDGGEKAIF 503
>gi|338213813|ref|YP_004657868.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Runella
slithyformis DSM 19594]
gi|336307634|gb|AEI50736.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Runella
slithyformis DSM 19594]
Length = 485
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/451 (50%), Positives = 307/451 (68%), Gaps = 31/451 (6%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+ R++ E+YGCQMN +D EIV ++M+NA ++ + ++A+VIF+NTCAIRD AE KV
Sbjct: 31 KKRLFIESYGCQMNFSDSEIVAAVMRNADFA-TTSSEDSADVIFLNTCAIRDNAEQKVRN 89
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAY 194
RL Y LK+ K P I+ VLGCMAERLK K+LD +KMVD+V GPD+Y
Sbjct: 90 RLQYLNNLKK-------------KRPGLIIGVLGCMAERLKTKLLDEEKMVDIVAGPDSY 136
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
RDLPRL+EE + GQK +N LS EETYADISP+R++ N +TA++S+MRGC+NMCSFC+VP
Sbjct: 137 RDLPRLVEEAETGQKAVNVFLSREETYADISPIRLNSNGITAYISIMRGCDNMCSFCVVP 196
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRGRERSR SIV+E L+ +G KEVTLLGQNV+SY K+ E AN
Sbjct: 197 YTRGRERSRDPFSIVEEARLLFADGYKEVTLLGQNVDSYKWKKETAKDGESTAN------ 250
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + FA LL+ ++L P++R R+++ HPKD D++L+ M+ N+CKYIH
Sbjct: 251 --------ALPVSFAQLLEMVALIHPDLRVRFSTSHPKDITDDVLWTMKKYENICKYIHF 302
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEEHADTLT 433
PAQ+GNS VL+ M R Y RE Y+ + +IR+++ D G+S+D I GFC ETEEEH DTL+
Sbjct: 303 PAQSGNSRVLKVMNRTYDREWYIQKIDRIREVLGEDCGISTDMITGFCTETEEEHQDTLS 362
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
LM+ V YD AYMFAYS R T A + DDVPEEVK+RRL E+I + + + +G
Sbjct: 363 LMEYVKYDYAYMFAYSERPGTPAAKKLKDDVPEEVKKRRLQEVIAVQLKHSSERNKLALG 422
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEGP+K++ + +L G++D+ V F
Sbjct: 423 KVHKVLVEGPSKRS-EADLCGRNDQNKVVIF 452
>gi|436835493|ref|YP_007320709.1| RNA modification enzyme, MiaB family [Fibrella aestuarina BUZ 2]
gi|384066906|emb|CCH00116.1| RNA modification enzyme, MiaB family [Fibrella aestuarina BUZ 2]
Length = 472
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/455 (49%), Positives = 307/455 (67%), Gaps = 42/455 (9%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
V + R+Y E+YGCQMN +D EIV ++M+NAG++ + E+A++IF+NTCAIRD AE K
Sbjct: 29 VDGKKRLYIESYGCQMNFSDSEIVAAVMRNAGFA-TTSTAEDADLIFLNTCAIRDNAEQK 87
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVV--LGCMAERLKDKILDADKMVDVVCG 190
V RL LK K P+++V LGCMAERLK K+L+ +K+VD+V G
Sbjct: 88 VRNRLKQLNTLK--------------KKKPELMVGMLGCMAERLKTKLLEEEKIVDIVAG 133
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
PDAYRD+P+L+EE + GQK +N LS EETYADI+P+R++ N VTAF+S+MRGC+NMCSF
Sbjct: 134 PDAYRDIPKLVEEAETGQKAVNVFLSREETYADIAPIRLNSNGVTAFISIMRGCDNMCSF 193
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
C+VPFTRGRERSR SIV+E ++L+ +G KEVTLLGQNV+SY W
Sbjct: 194 CVVPFTRGRERSRDPHSIVREAEQLFADGYKEVTLLGQNVDSY--------------KWT 239
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+G + FA+LL+R++L P++R R+++ HPKD DE+L+ M N+C
Sbjct: 240 SEQG---------EFVNFANLLERVALINPDLRVRFSTSHPKDITDEVLHTMARFDNICN 290
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEEHA 429
YIHLPAQ+GN+ +LE M R YTRE Y++ + +IR I+ D G+S D I GFC ETE+EH
Sbjct: 291 YIHLPAQSGNTRILELMNRTYTREWYIEKIDRIRAILGDDCGISHDMISGFCTETEDEHR 350
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
DTL+LM+ YD YMFAYS R T A + Y DDVPE+VK+RRL E+I + + +
Sbjct: 351 DTLSLMEYARYDYGYMFAYSERPGTMAAKKYKDDVPEDVKKRRLNEIIALQQRLSLERNQ 410
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G VQ VLVEG +K++ D +L G++D+ V F
Sbjct: 411 RHIGQVQRVLVEGTSKRSDD-DLFGRNDQNKVVVF 444
>gi|395830333|ref|XP_003788286.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 [Otolemur
garnettii]
Length = 540
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/423 (53%), Positives = 293/423 (69%), Gaps = 19/423 (4%)
Query: 35 LPDGPGLHHFIAQSSL----TASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNV 90
L GP HF+ +S +S + DL P V G Q ++Y ETYGCQMNV
Sbjct: 59 LATGPTFQHFLRSASAPQEKLSSPEVEDLPPYLTVDELLGR----QRKVYFETYGCQMNV 114
Query: 91 NDMEIVLSIMKNAGYSEVINVPE-NAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKK 149
ND EI SI++ +GY N+ E + + F R+ AE +W RL LK
Sbjct: 115 NDTEIAWSILQKSGYLRTSNLQEVHFWLNFACFDLCREKAEQTIWNRLLQLKALK----- 169
Query: 150 NVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQK 209
T R +S+ P KI +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 170 ---TRRLRSRVPLKIGILGCMAERLKEEILNREKMVDLLAGPDAYRDLPRLLAVAESGQQ 226
Query: 210 GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
N LLSL+ETYAD+ PV+ S + +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI+
Sbjct: 227 AANVLLSLDETYADVMPVQTSPSVTSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASIL 286
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
+EV +L ++G+KEVTLLGQNVNS+ D S E + + LS GF + K KK GLRFA
Sbjct: 287 EEVRKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVSSNLSRGFTTNYKTKKGGLRFA 344
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRR
Sbjct: 345 HLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRR 404
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GY+REAY++L+ IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+ ++FAYS
Sbjct: 405 GYSREAYVELIHHIRESIPSVSLSSDFIAGFCGETEEDHLQTVSLLREVQYNTGFLFAYS 464
Query: 450 MRE 452
MR+
Sbjct: 465 MRQ 467
>gi|392390939|ref|YP_006427542.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Ornithobacterium rhinotracheale DSM 15997]
gi|390522017|gb|AFL97748.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Ornithobacterium rhinotracheale DSM 15997]
Length = 477
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/474 (48%), Positives = 315/474 (66%), Gaps = 32/474 (6%)
Query: 54 QPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPE 113
+ + D EV A G + +++ E+YGCQMN +D EIV SI+ G+S NV E
Sbjct: 4 EKVIDETRQGEVYQAEGKK--GDRKLFLESYGCQMNFSDSEIVASILSKEGFS-TTNVLE 60
Query: 114 NAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVV--LGCMA 171
A++I +NTC+IR+ AE V +RLN F +K K PK++V LGCMA
Sbjct: 61 EADLILLNTCSIREKAEQTVRKRLNQFNAIK--------------KTNPKLLVGVLGCMA 106
Query: 172 ERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISK 231
ERLKDK L+ + +VD+V GPDAYRDLP LL+E++ G+ +N +LS +ETYAD+SPVR+
Sbjct: 107 ERLKDKFLEEEHIVDLVVGPDAYRDLPNLLQELEDGRSAVNVILSKDETYADLSPVRLGG 166
Query: 232 NSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVN 291
N VTAFVS+ RGC+NMC+FC+VPFTRGRERSR SI+KE ELW+ G KEVTLLGQNV+
Sbjct: 167 NGVTAFVSITRGCDNMCTFCVVPFTRGRERSRDPHSIIKECKELWENGYKEVTLLGQNVD 226
Query: 292 SYNDTSGMEKEVEPGANWRLSEGFNSMCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPH 350
SY G L + F + +++K + FA+LLD ++ E P MR R+++ +
Sbjct: 227 SYLWYGG-----------GLKKDFKNATEMQKATAVSFANLLDMVATEVPGMRIRFSTSN 275
Query: 351 PKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDV 410
P+D ++L++M N+CKYIHLP Q+G+++VL+RM R +TRE Y++LV IR+I+PD
Sbjct: 276 PQDMTLDVLHVMAKHNNICKYIHLPVQSGSTSVLKRMNRQHTREEYIELVDNIRKIVPDC 335
Query: 411 GLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQ 470
LS D I GFC ETEEEH DTL+LM+ V YD YMFAYS R T AH+ D+VPEEVK+
Sbjct: 336 ALSHDMIAGFCDETEEEHQDTLSLMEHVKYDFGYMFAYSDRPGTPAHKKMDDNVPEEVKK 395
Query: 471 RRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
RRL E+I+ ++ + + DS + V VL+EG +KK+ D E G++ + V F
Sbjct: 396 RRLREIIDLQQKHSKERMDSYLNKVHEVLIEGNSKKSDD-EWYGRTTQNTVVVF 448
>gi|268571887|ref|XP_002641175.1| Hypothetical protein CBG09036 [Caenorhabditis briggsae]
Length = 997
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/496 (47%), Positives = 316/496 (63%), Gaps = 34/496 (6%)
Query: 37 DGPGLHHFIAQSSLTASQPLADLAPASEVSSA--TGSEVHSQGR-IYQETYGCQMNVNDM 93
DG L FI + T Q + + P+ E + ++ GR + TYGCQMNV+DM
Sbjct: 493 DGLQLSDFIKEG--TKKQRMKQIIPSIEDTKEYLNPEDLKGNGRTVCYVTYGCQMNVSDM 550
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
EIV SIM G+ E E A+V+ + TC+IRD AE KVW L
Sbjct: 551 EIVRSIMTQYGFVES-EKKEKADVVLLMTCSIRDGAEKKVWNHLKLI------------- 596
Query: 154 GRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 212
RS S + +IV VLGCMAER++ +L +V++V GPD+YRDLPRL+ G IN
Sbjct: 597 -RSNSVNKSQIVGVLGCMAERVRHDLLAKRNLVNIVAGPDSYRDLPRLVAIAAGGSNAIN 655
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LSL+ETYAD+ P+R+ + TAF+S+MRGC+NMC++C+VPFTRGRERSRP+ESIV+EV
Sbjct: 656 VQLSLDETYADVQPIRVDAATKTAFISIMRGCDNMCTYCVVPFTRGRERSRPIESIVEEV 715
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE----GFNSMCKVKKMGLRF 328
L +G K++TLLGQNVNSY D + + P + SE GF ++ K K GL F
Sbjct: 716 RRLRDDGYKQITLLGQNVNSYRDLT-----ISPSTS---SEDRVPGFKTVYKPKTGGLTF 767
Query: 329 ADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMR 388
LL++++ PE+RFR+TSPHPKDFP +L+ ++ RPN+CK +HLPAQ+G+ LERM
Sbjct: 768 TSLLEQVADAAPEVRFRFTSPHPKDFPMQLIELIASRPNLCKQLHLPAQSGDDDTLERMG 827
Query: 389 RGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAY 448
RGYTR+ YL LV IR+I+P+V L+SDFI GFCGETE+ H TL+L++ VGY ++F Y
Sbjct: 828 RGYTRDLYLRLVDDIRKILPNVFLTSDFIAGFCGETEQAHQMTLSLIRQVGYSFCFVFPY 887
Query: 449 SMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAP 508
SMR +T AH DDVPEEVK +R +L FRE + + +GT Q+VL EG +++
Sbjct: 888 SMRGKTRAHHRLADDVPEEVKAQRHLDLTTVFREEALKLNQTLIGTEQIVLREGTSRRDA 947
Query: 509 DTELVGKSDRGHRVAF 524
T G+ D G + F
Sbjct: 948 -TFSYGRIDGGVKTVF 962
>gi|410029844|ref|ZP_11279674.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Marinilabilia
sp. AK2]
Length = 488
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/458 (49%), Positives = 307/458 (67%), Gaps = 25/458 (5%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
A A + + ++Y E+YGCQMN +D EIV SIMK G+ + E A+VIF
Sbjct: 17 AQACDFKTTEEENTGKSKKLYIESYGCQMNFSDSEIVASIMKENGFDTTSDF-EQADVIF 75
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
+NTC+IR+ AE V RLN+F +K+ +K I VLGCMAERLKDK+L
Sbjct: 76 LNTCSIREKAEQTVRNRLNHFNSVKK------------NKPELTIGVLGCMAERLKDKLL 123
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS 239
+ +K+VDVV GPDAYRDLP L+ + G KG+NT LS EETYADISPVR++ N VTAF+S
Sbjct: 124 EEEKIVDVVVGPDAYRDLPNLVASAEEGNKGVNTFLSREETYADISPVRLNSNGVTAFIS 183
Query: 240 VMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGM 299
+MRGC+NMCSFC+VPFTRGRERSR SIV E EL+++G +EVTLLGQNV+SY +
Sbjct: 184 IMRGCDNMCSFCVVPFTRGRERSRDPHSIVNEARELFEKGYREVTLLGQNVDSYKWSP-- 241
Query: 300 EKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELL 359
E RL++ + KV + FA+LL+ ++L P++R R+++ HPKD DE+L
Sbjct: 242 ----EENNKARLNKKEGEVSKV----VNFANLLEMVALIDPKLRVRFSTSHPKDITDEVL 293
Query: 360 YIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFIC 418
Y M+ N+CKYIHLP Q+GNS VLE M R Y RE YLD V+ IR+I+ + G+SSD I
Sbjct: 294 YTMKKYDNICKYIHLPVQSGNSRVLELMNRTYDREWYLDRVRAIREILGEECGISSDMIA 353
Query: 419 GFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIE 478
GFC ETEEEH DTLTLM V YD +YMF YS R T A + + DD+P ++K+RRL E+IE
Sbjct: 354 GFCTETEEEHQDTLTLMDIVKYDFSYMFYYSERPGTLAAKKFADDIPLDIKKRRLAEIIE 413
Query: 479 AFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
+ + + +G +Q +L+EG +K++ + +L G++
Sbjct: 414 KQNQLSLERNKLDIGKIQEILIEGTSKRS-EAQLKGRN 450
>gi|426391395|ref|XP_004062060.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 404
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/355 (59%), Positives = 272/355 (76%), Gaps = 3/355 (0%)
Query: 170 MAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRI 229
MAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+ N LLSL+ETYAD+ PV+
Sbjct: 1 MAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVMPVQT 60
Query: 230 SKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQN 289
S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++EV +L ++G+KEVTLLGQN
Sbjct: 61 SASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEEVKKLSEQGLKEVTLLGQN 120
Query: 290 VNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSP 349
VNS+ D S E + LS GF + K K+ GLRFA LLD++S PEMR R+TSP
Sbjct: 121 VNSFRDNS--EVQFNNAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSP 178
Query: 350 HPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPD 409
HPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY+REAY++LV IR+ IP
Sbjct: 179 HPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGYSREAYVELVHHIRESIPG 238
Query: 410 VGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVK 469
V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR++T A+ DDVPEEVK
Sbjct: 239 VSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVK 298
Query: 470 QRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
RRL ELI FRE + + VG QLVLVEG +K++ T+L G++D +V F
Sbjct: 299 LRRLEELITIFREEATKANQTSVGCTQLVLVEGLSKRSA-TDLCGRNDGNLKVIF 352
>gi|387793173|ref|YP_006258238.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Solitalea canadensis DSM 3403]
gi|379656006|gb|AFD09062.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Solitalea canadensis DSM 3403]
Length = 472
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/448 (50%), Positives = 291/448 (64%), Gaps = 38/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SIM + G++ E A+VIFINTC+IR+ AE +V RL
Sbjct: 33 KLYIESYGCQMNFSDSEIVASIMMDMGFTTTGTYQE-ADVIFINTCSIRENAEQRVRNRL 91
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
F K + P +V VLGCMAERLK K L+ +K+VD+V GPDAYRD
Sbjct: 92 KDFAVAKL-------------RKPDMMVGVLGCMAERLKAKFLEEEKLVDIVVGPDAYRD 138
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+ D G K +N LLS EETYADI+PVR++ N ++AFVS+MRGC+NMCSFC+VPFT
Sbjct: 139 LPNLINSADEGNKAVNVLLSREETYADINPVRLTSNGISAFVSIMRGCDNMCSFCVVPFT 198
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SIV+EV EL+ G KEVTLLGQNV+SY W +G
Sbjct: 199 RGRERSRDAHSIVQEVTELYNNGYKEVTLLGQNVDSYK--------------WSSEDGTE 244
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ FA LL+R++L P++R R+++ HPKD DE+LY M N+CKYIHLP
Sbjct: 245 K--------VNFAQLLERVALVSPDVRIRFSTSHPKDITDEVLYTMDKYDNICKYIHLPV 296
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+GNS +L+ M R Y RE Y++ V IR+I+PD +S+D I GFC ETEEEH DTL++M
Sbjct: 297 QSGNSRILDLMNRTYDREWYMERVNAIRRILPDCAISTDIIAGFCSETEEEHQDTLSIMD 356
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
YD AYMF YS R T A + DD+PE +K RRL E+I R+ + D QVG VQ
Sbjct: 357 FAIYDYAYMFMYSERPGTPAAKKLTDDIPENIKNRRLNEIISKQRDHSKVRLDQQVGKVQ 416
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D + G++D+ V F
Sbjct: 417 KVLIEGFSKKS-DKDYCGRNDQNAMVIF 443
>gi|327404270|ref|YP_004345108.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Fluviicola taffensis DSM
16823]
gi|327319778|gb|AEA44270.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Fluviicola taffensis DSM
16823]
Length = 479
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/464 (48%), Positives = 305/464 (65%), Gaps = 42/464 (9%)
Query: 65 VSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCA 124
+ TGS+ ++Y E+YGCQMN +D E+V SIM GY+ N+ E A+V+ INTC+
Sbjct: 22 LEGGTGSK-----KLYVESYGCQMNFSDSEVVASIMTKEGYTTTRNIDE-ADVVLINTCS 75
Query: 125 IRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKM 184
IR+ AE +V RL F K E + N+ G +LGCMAERLK +L+ +++
Sbjct: 76 IRENAETRVRNRLTEFKKRKAE-QPNLVVG-----------ILGCMAERLKQALLEEEQL 123
Query: 185 VDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGC 244
VD+V GPDAYRDLP L++EV GQ+ +N LLS EETYADISPVR+ + V+AFV++ RGC
Sbjct: 124 VDLVAGPDAYRDLPNLIDEVGTGQRAVNVLLSREETYADISPVRMDQGGVSAFVTITRGC 183
Query: 245 NNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY----NDTSGME 300
+NMCSFC+VPFTRGRERSR +IV+E +L+ G +EVTLLGQNV+SY + ++
Sbjct: 184 DNMCSFCVVPFTRGRERSRDPLTIVQECKDLFANGYREVTLLGQNVDSYRWNMSSKGVLK 243
Query: 301 KEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
E P N FA L++ ++L P++R R+++ HPKD D++L
Sbjct: 244 DETIPTTN-------------------FAQLMEMVALIHPDLRIRFSTSHPKDMTDDVLE 284
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
+M N+C YIHLP Q+GNS VLERM RGY+RE YL+ + I++IIPD +S+D I GF
Sbjct: 285 MMAKYENICPYIHLPVQSGNSNVLERMNRGYSREWYLERIAAIKRIIPDCAISTDIITGF 344
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGETEEEH +T++LM+ VGYD AYMF YS R +T A R + DDVPEEVK +RL E+I
Sbjct: 345 CGETEEEHQETVSLMREVGYDFAYMFKYSERPKTLAERKFEDDVPEEVKGKRLEEIIALQ 404
Query: 481 RESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++ + SQVG + VLVEGP+K++ + G+ R +V F
Sbjct: 405 LKNASAAHKSQVGKIAKVLVEGPSKRSAE-HFSGRDGRNSKVVF 447
>gi|110638221|ref|YP_678430.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cytophaga
hutchinsonii ATCC 33406]
gi|123058778|sp|Q11U26.1|MIAB_CYTH3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|110280902|gb|ABG59088.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Cytophaga hutchinsonii
ATCC 33406]
Length = 481
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/451 (50%), Positives = 302/451 (66%), Gaps = 39/451 (8%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q ++Y E+YGCQMN +D EIV+SI+ G+ + + P NA+VI +NTC+IRD AE KV
Sbjct: 37 QRKLYIESYGCQMNFSDSEIVMSILTEEGF-DTTSTPNNADVILLNTCSIRDNAEQKVRH 95
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAY 194
RL +F LKR P IV VLGCMAERLK ++L+ +K+VD+V GPDAY
Sbjct: 96 RLVHFKGLKR-------------NKPSMIVGVLGCMAERLKAQLLEEEKIVDMVVGPDAY 142
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
RDLP L+ EVD G K +N LS EETYADI+P+R+S + V+AFVS+MRGC+NMCSFC+VP
Sbjct: 143 RDLPNLINEVDSGHKAVNVFLSREETYADINPLRLSGDGVSAFVSIMRGCDNMCSFCVVP 202
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRGRERSR SI+ EV EL G KEVTLLGQNV+SY K G + R++
Sbjct: 203 YTRGRERSRDAHSILNEVRELVANGYKEVTLLGQNVDSY-------KWSAEGTDERVN-- 253
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FA LL+R++L P++R R+++ HPKD DE+LY M+ N+C IHL
Sbjct: 254 -------------FAQLLERVALVDPDLRVRFSTSHPKDITDEVLYTMKKYDNICNSIHL 300
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEEHADTLT 433
PAQ+GN+ +LE M R YTRE Y++ + KIRQI+ D G+SSD I GFC ETEEEH DTL+
Sbjct: 301 PAQSGNTRILELMNRTYTREWYMERITKIRQILGDDCGISSDTIAGFCSETEEEHQDTLS 360
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
LM+ +D Y F YS R T A + DDVPE+VKQRRL+E+I R+ + + +Q+G
Sbjct: 361 LMEFARFDFGYQFVYSERPGTPAAKKLADDVPEDVKQRRLSEIITVQRQLSLEHNQAQIG 420
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
T+Q +L+EG +KK+ + +L G++ R F
Sbjct: 421 TIQKILIEGVSKKS-EHDLKGRNSRNMMAIF 450
>gi|308497096|ref|XP_003110735.1| hypothetical protein CRE_04500 [Caenorhabditis remanei]
gi|308242615|gb|EFO86567.1| hypothetical protein CRE_04500 [Caenorhabditis remanei]
Length = 561
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/445 (48%), Positives = 295/445 (66%), Gaps = 6/445 (1%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNV+DMEIV SIM G+ E + E A+++ + TC+IRD AE KVW +L
Sbjct: 85 TYGCQMNVSDMEIVRSIMSQYGFVES-DQKEKADIVLLMTCSIRDGAEKKVWNQLKLIRS 143
Query: 143 LKREWKKNVAT-GRSQSKHPPKIVVL-GCMAERLKDKILDADKMVDVVCGPDAYRDLPRL 200
++ V G KI L GCMAER++ +L+ +V++V GPD+YRDLPRL
Sbjct: 144 NSVNKRQIVGVLGLFSVLMNAKISYLTGCMAERVRHDLLEKRNLVNIVAGPDSYRDLPRL 203
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
+ G IN LSL+ETYA++ P+R+ S TAF+S+MRGC+NMC++C+VPFTRGRE
Sbjct: 204 VAVASGGSNAINVQLSLDETYAEVQPIRVDAESRTAFISIMRGCDNMCTYCVVPFTRGRE 263
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
RSRP++SIV+EV L +G K++TLLGQNVNSY D + M+ + P GF ++ K
Sbjct: 264 RSRPIDSIVEEVRRLRDQGYKQITLLGQNVNSYRDMTSMDFPMNPSTTEDRVPGFKTVYK 323
Query: 321 VKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGN 380
K GL F LL++++ P++RFR+TSPHPKDFP +L+ ++ R N+CK +HLPAQ+G+
Sbjct: 324 PKSGGLTFTSLLEKVADAAPDVRFRFTSPHPKDFPMQLIELIASRTNLCKQLHLPAQSGD 383
Query: 381 SAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGY 440
L+RM RGY+R+ YL LV IR I+P+V L+SDFI GFCGETEE H +TL+L++ VGY
Sbjct: 384 DETLDRMGRGYSRDLYLRLVDDIRIILPNVSLTSDFIAGFCGETEEAHQNTLSLIREVGY 443
Query: 441 DMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLV 500
++F YSMR +T AH DDVPE VK RR +L FRE + +GT Q VL+
Sbjct: 444 SFCFVFPYSMRGKTRAHHRLTDDVPENVKARRHLDLTTVFREEAMKLNQKLIGTEQTVLL 503
Query: 501 EGPNKKAPDTELV-GKSDRGHRVAF 524
EG +K+ D G++D G + F
Sbjct: 504 EGKSKR--DVAFSHGRTDGGVKAVF 526
>gi|440747075|ref|ZP_20926336.1| tRNA-i(6)A37 methylthiotransferase [Mariniradius saccharolyticus
AK6]
gi|436484704|gb|ELP40680.1| tRNA-i(6)A37 methylthiotransferase [Mariniradius saccharolyticus
AK6]
Length = 486
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/458 (50%), Positives = 304/458 (66%), Gaps = 25/458 (5%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
A A + + ++Y E+YGCQMN +D EIV SIMK G+ +V E A+VIF
Sbjct: 16 AQACDYKTTQDENTGKSKKLYIESYGCQMNFSDSEIVASIMKENGFDTTSDV-EKADVIF 74
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
+NTC+IR+ AE V RL++F LKR+ K I VLGCMAERLKDK+L
Sbjct: 75 LNTCSIREKAEQTVRNRLSHFNALKRQ------------KPEMTIGVLGCMAERLKDKLL 122
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS 239
+ +K+VDVV GPDAYRDLP L+ + G+KGINT LS EETYADISPVR++ N VTAF+S
Sbjct: 123 EEEKIVDVVVGPDAYRDLPNLVAAAEDGEKGINTFLSREETYADISPVRLNSNGVTAFIS 182
Query: 240 VMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGM 299
+MRGC+NMCSFC+VPFTRGRERSR SIVKE EL+ G +EVTLLGQNV+SY +
Sbjct: 183 IMRGCDNMCSFCVVPFTRGRERSRDPHSIVKEAQELFAAGYREVTLLGQNVDSYKWSP-- 240
Query: 300 EKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELL 359
E RL++ + + V + FA LL+ ++ P +R R+++ HPKD DE+L
Sbjct: 241 ----EENNKARLNKKEDEVSTV----VNFAHLLEMVAQVSPLLRVRFSTSHPKDITDEVL 292
Query: 360 YIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFIC 418
+ M+ N+CKYIHLP Q+GNS +LE M R Y RE YLD V+ IR+I+ + G+SSD I
Sbjct: 293 HTMKRYDNICKYIHLPVQSGNSRILELMNRTYDREWYLDRVRAIREILGEECGISSDMIA 352
Query: 419 GFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIE 478
GFC ETEEEH DTL+LM V YD +YMF YS R T A + +VDD+P +VK+RRL E+IE
Sbjct: 353 GFCTETEEEHRDTLSLMDIVQYDFSYMFFYSERPGTLAAKKFVDDIPLDVKKRRLAEIIE 412
Query: 479 AFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
+ Q G VQ +L+EG +K++ + +L G++
Sbjct: 413 KQTALSLQRNKLDAGKVQEILIEGTSKRS-EAQLKGRN 449
>gi|404448700|ref|ZP_11013692.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Indibacter
alkaliphilus LW1]
gi|403765424|gb|EJZ26302.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Indibacter
alkaliphilus LW1]
Length = 486
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/462 (49%), Positives = 309/462 (66%), Gaps = 29/462 (6%)
Query: 58 DLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEV 117
D A A + + + ++Y E+YGCQMN +D EIV SIMK+ G+ + E A+V
Sbjct: 14 DQAQACDFKTTVEEDTGKSKKLYIESYGCQMNFSDSEIVASIMKDNGFDTTSDY-EQADV 72
Query: 118 IFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPK--IVVLGCMAERLK 175
IF+NTC+IR+ AE V +RL+ F +K KH P+ I VLGCMAERLK
Sbjct: 73 IFLNTCSIREKAELTVRKRLSQFNAIK--------------KHKPEMTIGVLGCMAERLK 118
Query: 176 DKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVT 235
DK+L+ +K+VDVV GPDAYRDLP L+ + GQKG+NT LS EETYADI+PVR++ N ++
Sbjct: 119 DKLLEEEKIVDVVVGPDAYRDLPNLVSSAEDGQKGVNTFLSREETYADIAPVRLNSNGIS 178
Query: 236 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYND 295
AF+S+MRGC+NMCSFC+VPFTRGRERSR SIVKE +L+++G KEVTLLGQNV+SY
Sbjct: 179 AFISIMRGCDNMCSFCVVPFTRGRERSRDPHSIVKEAQDLFEKGYKEVTLLGQNVDSYKW 238
Query: 296 TSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFP 355
+ E RL++ + V + FA+LL+ ++ P++R R+++ HPKD
Sbjct: 239 SP------EENNKARLNKKEEEVSTV----VNFANLLEMVAKVSPQLRVRFSTSHPKDIT 288
Query: 356 DELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSS 414
DE+LY M+ N+CKYIHLP Q+GNS VLE M R Y RE YL+ VQ IR+I+ + G+SS
Sbjct: 289 DEVLYTMKAYDNICKYIHLPVQSGNSRVLELMNRTYDREWYLNRVQAIREILGEECGISS 348
Query: 415 DFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLT 474
D I GFC ETEEEH DTLT+M V YD +YMF YS R T A + + DD+P E K+RRL
Sbjct: 349 DMIAGFCTETEEEHQDTLTIMDIVKYDFSYMFYYSERPGTLAAKKFEDDIPLETKKRRLA 408
Query: 475 ELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
E+IE + + +G VQ +LVEG +K++ + +L G++
Sbjct: 409 EIIEKQAAISLERNKMDIGKVQEILVEGTSKRSEE-QLKGRN 449
>gi|284035911|ref|YP_003385841.1| MiaB family RNA modification protein [Spirosoma linguale DSM 74]
gi|283815204|gb|ADB37042.1| RNA modification enzyme, MiaB family [Spirosoma linguale DSM 74]
Length = 513
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/462 (49%), Positives = 304/462 (65%), Gaps = 32/462 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R+Y E+YGCQMN D EIV ++M+NAGY+ + E A+VIF+NTCAIRD AE KV RL
Sbjct: 39 RLYIESYGCQMNFADSEIVAAVMRNAGYATTSSADE-ADVIFLNTCAIRDNAEQKVRHRL 97
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVV--LGCMAERLKDKILDADKMVDVVCGPDAYR 195
+ LKR+ P+++V LGCMAERLK K+L+ +K+VD+V GPDAYR
Sbjct: 98 KHLTGLKRQ--------------KPELLVGMLGCMAERLKTKLLEEEKVVDIVAGPDAYR 143
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
D+P+L+EE + GQK +N LS EETYADISP+R++ N VTAFVS+MRGC+NMCSFC+VPF
Sbjct: 144 DIPKLVEEAESGQKAVNVFLSREETYADISPIRLNSNGVTAFVSIMRGCDNMCSFCVVPF 203
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR SIV+E +L+ +G +EVTLLGQNV+SY G+ E E G R
Sbjct: 204 TRGRERSRDPFSIVREAQDLFDQGYREVTLLGQNVDSYKWELGVRSE-ELGVADRTGRPA 262
Query: 316 NSMCKVKKM------------GLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMR 363
++ FA LL+ ++ P++R R+++ HPKD D++L+ M
Sbjct: 263 SANMDASATPNSSLLTTNTNTTTTFAHLLEMVAQIHPDLRVRFSTSHPKDITDDVLHTMA 322
Query: 364 DRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCG 422
N+C YIHLPAQ+GNS VL+ M R Y R Y+ + +IR+I+ D G+S+D I GFC
Sbjct: 323 RYDNICNYIHLPAQSGNSRVLKLMNRTYDRPWYIGKIDRIREILGEDCGISTDMISGFCT 382
Query: 423 ETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRE 482
ETEEEH D+L+LM V YD AYMFAYS R T A + Y DD+PE+VK+RRL E+I
Sbjct: 383 ETEEEHQDSLSLMDYVHYDYAYMFAYSERPGTLAAKKYADDIPEDVKKRRLNEIIARQLA 442
Query: 483 STGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VQ VL+EGP+K++ D L G++D+ V F
Sbjct: 443 HSAERNQRHIGQVQRVLIEGPSKRSDDF-LCGRNDQNKMVVF 483
>gi|431797730|ref|YP_007224634.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Echinicola vietnamensis DSM 17526]
gi|430788495|gb|AGA78624.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Echinicola vietnamensis DSM 17526]
Length = 486
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/469 (49%), Positives = 308/469 (65%), Gaps = 25/469 (5%)
Query: 57 ADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAE 116
A+ A A E + Q ++Y E+YGCQMN +D EIV SIMK G+ N E A+
Sbjct: 13 AEEAQACEFKTTEEENTGKQKKLYIESYGCQMNFSDSEIVASIMKKNGFDTTSNF-EQAD 71
Query: 117 VIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKD 176
VIF+NTC+IR+ AE V +RL F +K+ ++ I VLGCMAERLKD
Sbjct: 72 VIFLNTCSIREKAELTVRKRLTQFNTIKK------------ARPDLTIGVLGCMAERLKD 119
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTA 236
K+L+ +K+VDVV GPDAYRDLP L++ + G KG+NT LS EETYADISPVR++ N V+A
Sbjct: 120 KLLEEEKLVDVVVGPDAYRDLPNLVKVAEEGDKGVNTFLSREETYADISPVRLNTNGVSA 179
Query: 237 FVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDT 296
F+S+MRGC+NMCSFC+VPFTRGRERSR SIVKE EL+ +G KEVTLLGQNV+SY +
Sbjct: 180 FISIMRGCDNMCSFCVVPFTRGRERSRDPHSIVKEAQELFDKGYKEVTLLGQNVDSYKWS 239
Query: 297 SGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPD 356
E RL++ + +V + FA+LL+ ++ P++R R+++ HPKD D
Sbjct: 240 P------EENNKARLNKQEEDVSEV----INFANLLEMVAKVAPQLRVRFSTSHPKDITD 289
Query: 357 ELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSD 415
E+LY M+ N+CKYIHLP Q+GNS +L+ M R Y RE YL+ V KIR+I+ + G+SSD
Sbjct: 290 EVLYTMKKYDNICKYIHLPVQSGNSRILDLMNRTYDREWYLERVAKIREILGQECGISSD 349
Query: 416 FICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTE 475
I GFC ETEEEH +TL+LM V YD +YMF YS R T A + Y DD+P E K+RRL E
Sbjct: 350 MIAGFCSETEEEHQETLSLMDIVKYDFSYMFFYSERPGTLAAKKYEDDIPLETKKRRLQE 409
Query: 476 LIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+I + + + +G Q VLVEG +K++ + +L G++ V F
Sbjct: 410 IIAKQTQHSLERNKLDLGQTQEVLVEGTSKRSEE-QLKGRNSANKVVIF 457
>gi|307106392|gb|EFN54638.1| hypothetical protein CHLNCDRAFT_135184 [Chlorella variabilis]
Length = 635
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/484 (47%), Positives = 308/484 (63%), Gaps = 85/484 (17%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGCQMNVND E+VL+I WQRL Y
Sbjct: 107 FVETYGCQMNVNDSEVVLAI----------------------------------WQRLGY 132
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
LKR ++ + PP + VLGCMAERLK+++L+ +K+VD+V GPDAYRDLPR
Sbjct: 133 LKSLKRRPG-------AERRPPPVVGVLGCMAERLKERLLEREKLVDIVAGPDAYRDLPR 185
Query: 200 LLEEVDYG-------------------QKGINTLLSLEETYADISPVRISKNSVTAFVSV 240
L++ V G +N LS +ETYADI+P+R ++++AFVS+
Sbjct: 186 LIDIVQGGAGGPGGVLGSGGLPRPGGRAAAMNVQLSADETYADITPLR-QPDALSAFVSI 244
Query: 241 MRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG-- 298
MRGCNNMC+FCIVP+TRGRERSRP++SIV+ + E +GV+EVTLLGQNVNSY D S
Sbjct: 245 MRGCNNMCAFCIVPYTRGRERSRPLQSIVRMLSE---QGVREVTLLGQNVNSYADFSNNH 301
Query: 299 --------------MEKEVEPGAN---WRLSEGFNSMCKVKKMGL-RFADLLDRLSLEFP 340
+E G + + GF S + ++ G FA+LLD ++ P
Sbjct: 302 DDSSSGVGSSSRGGGVEEASAGEDPFGAVYARGFRSAYRPRRQGAASFAELLDAVAGVDP 361
Query: 341 EMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLV 400
EMR R+TSPHPKDF D++L ++ RPNVCK +H+PAQ+G+SAVLERMRRGYTREAY LV
Sbjct: 362 EMRIRFTSPHPKDFSDDVLRVIASRPNVCKQLHMPAQSGSSAVLERMRRGYTREAYDALV 421
Query: 401 QKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNY 460
+ +R IP+V LS+D I GFCGE EE+HA +L L+++ GYD A++FAYSMR +THA R+Y
Sbjct: 422 RHVRNAIPEVALSTDMIAGFCGEGEEDHAASLDLVRSAGYDQAFLFAYSMRGKTHAARHY 481
Query: 461 VDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGH 520
DDVPEEVKQRRL ELI A+R+ + +++G LVLVEGP++++ ++ L G++D
Sbjct: 482 QDDVPEEVKQRRLAELIAAYRQELYRRAAAELGRRHLVLVEGPSRRS-ESALTGRTDTFK 540
Query: 521 RVAF 524
RV F
Sbjct: 541 RVVF 544
>gi|6841556|gb|AAF29131.1|AF161516_1 HSPC167 [Homo sapiens]
Length = 586
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/494 (48%), Positives = 317/494 (64%), Gaps = 22/494 (4%)
Query: 35 LPDGPGLHHFIAQSSL---TASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLP + K +
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPGCWLMLSRASK-L 224
Query: 212 NTLLSLEETYADIS-PVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVK 270
T SL +S R ++ +AFVS+MRGC+NMCS+CIV + G R + +
Sbjct: 225 PTCCSLWTRPMLMSCQSRQGASATSAFVSIMRGCDNMCSYCIV-LSPGAGRGVGLLPHSR 283
Query: 271 EVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFAD 330
+E + G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA
Sbjct: 284 GSEEAFLAGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGFTTNYKTKQGGLRFAH 341
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRG
Sbjct: 342 LLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRG 401
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
Y+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSM
Sbjct: 402 YSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSM 461
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T
Sbjct: 462 RQKTRAYHRLKDDVPEEVKLRRLEELITIFREEASKANQTSVGCTQLVLVEGLSKRSA-T 520
Query: 511 ELVGKSDRGHRVAF 524
+L G++D +V F
Sbjct: 521 DLCGRNDGNLKVIF 534
>gi|189502025|ref|YP_001957742.1| hypothetical protein Aasi_0614 [Candidatus Amoebophilus asiaticus
5a2]
gi|229890438|sp|B3ES11.1|MIAB_AMOA5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|189497466|gb|ACE06013.1| hypothetical protein Aasi_0614 [Candidatus Amoebophilus asiaticus
5a2]
Length = 486
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/448 (50%), Positives = 303/448 (67%), Gaps = 30/448 (6%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y E+YGCQMN+ D E+V+SI++ G+ E+ + E A+VIFINTCAIRD AE V +RL+
Sbjct: 37 LYVESYGCQMNIADSEVVVSILRPHGF-EITDTYEKADVIFINTCAIRDKAEQTVRKRLS 95
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F LKR ++P ++ VLGCMAERLK +L+ +K+VD+V GPDAYRDL
Sbjct: 96 QFNQLKR-------------RNPDLVIGVLGCMAERLKQTLLEEEKLVDLVAGPDAYRDL 142
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
PRLL VD G K INT LS EETYADISP+R++ N V+AF+S+MRGC+NMCSFC+VPFTR
Sbjct: 143 PRLLATVDSGHKAINTFLSREETYADISPIRLNSNGVSAFISIMRGCDNMCSFCVVPFTR 202
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SIVKE EL+++G +EVTLLGQNV+SY + +K+ +P EG
Sbjct: 203 GRERSRDPYSIVKEATELFEQGYREVTLLGQNVDSYKWSPNTDKKEQPTTP---QEGV-- 257
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ FA LL ++ P++R R+++ HPKD D++LY ++ N+CKYIHLP Q
Sbjct: 258 --------VNFAQLLAMVAQIHPDLRIRFSTSHPKDITDQVLYTIKAYDNICKYIHLPVQ 309
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEEHADTLTLMK 436
+G+S VL+ M R Y R YL ++ IR+I+ D G+SSD I GFC ETEE+H DTL+LM+
Sbjct: 310 SGSSRVLKLMNRTYDRAWYLQKIEDIRRIVGEDCGISSDMIAGFCTETEEDHQDTLSLME 369
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
+ Y+ +YMF YS R T A R Y DDVP VK+RRL E+I+ R+ + + +G V
Sbjct: 370 HIKYEFSYMFYYSERPGTLAARKYADDVPLAVKKRRLQEIIDKQRQHSFEKNLKDIGKVY 429
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK+ D E G++ V F
Sbjct: 430 QVLVEGPSKKS-DIEWQGRNSANKVVVF 456
>gi|390443435|ref|ZP_10231227.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Nitritalea
halalkaliphila LW7]
gi|389666620|gb|EIM78065.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Nitritalea
halalkaliphila LW7]
Length = 483
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/462 (49%), Positives = 304/462 (65%), Gaps = 35/462 (7%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
A A +V ++Y E+YGCQMN +D EIV SIMK G+ ++ E A+VIF
Sbjct: 16 AQACDVKVTAEEATGKSKKLYIESYGCQMNFSDSEIVASIMKENGFDTTSDM-EKADVIF 74
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
+NTC+IR+ AE V +RL +F LK+ +K I VLGCMAERLK+K+L
Sbjct: 75 LNTCSIREKAELTVRKRLVHFNALKK------------NKPELTIGVLGCMAERLKEKLL 122
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS 239
+ +++VDVV GPDAYRDLP L+ + G KG+NT LS EETYADI+PVR++ N V+AF+S
Sbjct: 123 EEEQIVDVVVGPDAYRDLPNLVAVAEAGDKGVNTFLSREETYADIAPVRLNSNGVSAFIS 182
Query: 240 VMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGM 299
+MRGC+NMCSFC+VPFTRGRERSR SIV E EL+ +G KEVTLLGQNV+SY
Sbjct: 183 IMRGCDNMCSFCVVPFTRGRERSRDPHSIVAEARELFAKGYKEVTLLGQNVDSY------ 236
Query: 300 EKEVEPGANWRLSEGFNSMCKVKKMG----LRFADLLDRLSLEFPEMRFRYTSPHPKDFP 355
W E N+ ++ KMG + FA LL+ ++ P++R R+++ HPKD
Sbjct: 237 --------KWSAEE--NNKARLNKMGVDAVVNFAQLLEMVAQVDPKLRVRFSTSHPKDIT 286
Query: 356 DELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSS 414
DE+LY M+ N+CKYIHLP Q+GNS VL+ M R YTRE YL+ V+KIR+I+ D G+SS
Sbjct: 287 DEVLYTMKRYANICKYIHLPVQSGNSRVLDLMNRTYTREWYLERVEKIREILGEDCGISS 346
Query: 415 DFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLT 474
D I GFC ETEEEH DTL+LM V YD +YMF YS R T A + + DD+P EVK+RRL
Sbjct: 347 DMIAGFCTETEEEHQDTLSLMDIVQYDFSYMFFYSERPGTLAAKKFKDDIPLEVKKRRLA 406
Query: 475 ELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
E+I + VG VQ +L+EG +K++ + +L G++
Sbjct: 407 EIIAKQNALSLLRNQRDVGQVQEILIEGVSKRSEE-QLKGRN 447
>gi|222424602|dbj|BAH20256.1| AT4G36390 [Arabidopsis thaliana]
Length = 310
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/246 (80%), Positives = 224/246 (91%), Gaps = 3/246 (1%)
Query: 279 GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLE 338
GVKEVTLLGQNVNSYND S + E GANW SEGF+S CKVK MGLRFADLLDRLS+E
Sbjct: 1 GVKEVTLLGQNVNSYNDDSA---DRESGANWEYSEGFSSRCKVKNMGLRFADLLDRLSVE 57
Query: 339 FPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLD 398
FPEMRFR+TSPHPKD+PDELLY+MRDR N+C IHLPAQ+GNS +LE+MRRGYTREAYLD
Sbjct: 58 FPEMRFRFTSPHPKDYPDELLYLMRDRHNICNLIHLPAQSGNSRILEQMRRGYTREAYLD 117
Query: 399 LVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHR 458
LV+KIR IIPDV ++SDFI GFCGETEEEH +TL+L++AVGYDMAYMFAYSMRE+THAHR
Sbjct: 118 LVKKIRSIIPDVAITSDFITGFCGETEEEHQETLSLVRAVGYDMAYMFAYSMREKTHAHR 177
Query: 459 NYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDR 518
NY DDVPEEVKQRRLTELI+AFRE+TG CYDSQVG+ QLVLVEGPNK+AP+TEL+GK+D+
Sbjct: 178 NYTDDVPEEVKQRRLTELIDAFRETTGPCYDSQVGSTQLVLVEGPNKRAPETELIGKTDK 237
Query: 519 GHRVAF 524
GHRV+F
Sbjct: 238 GHRVSF 243
>gi|390594092|gb|EIN03507.1| hypothetical protein PUNSTDRAFT_147038 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 590
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/513 (46%), Positives = 316/513 (61%), Gaps = 51/513 (9%)
Query: 41 LHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIM 100
L HFIA +SL A+ D P S Y E YGCQMN D +I+ I+
Sbjct: 17 LEHFIANASLGAAAEPHDPPPYLAQKLIPKS-------FYLEVYGCQMNGADSDILNRIL 69
Query: 101 KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKH 160
+AGY+ +A+++ + TCAIR+ AE K+W+RL + +A R++
Sbjct: 70 VDAGYTPSPTA-SDADIVLLITCAIRENAESKIWRRL-----------RELAPLRARGG- 116
Query: 161 PPKIVVLGCMAERLKDKILDA----------DKMVDVVCGPDAYRDLPRLL----EEVDY 206
K+ +LGCMAERLK +L+ ++MVDVVCGPDAYR LPRLL EE D
Sbjct: 117 --KVGLLGCMAERLKLSLLEGKVDEKTGKRDERMVDVVCGPDAYRSLPRLLGQVEEEGDG 174
Query: 207 GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVE 266
G+ N LS +ETYADI+P+ + TA +++MRGCNNMCS+CIVPFTRGRERSRP+
Sbjct: 175 GRGAANVQLSADETYADITPLSTDPSKKTANLTIMRGCNNMCSYCIVPFTRGRERSRPIT 234
Query: 267 SIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVE----------PGANWRLS---E 313
SI+ EV L G+KE+TLLGQNVNSY DT+ + PG + S
Sbjct: 235 SILDEVRHLSSIGIKEITLLGQNVNSYRDTTPSSMALFSSSSSTSIPPPGVSLGASLSSP 294
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
GF + + G+ FA LLDR+SL PEMR R+ SPHP++FP +LL ++ RPN+C IH
Sbjct: 295 GFKPVYRFDPSGIHFAALLDRVSLIDPEMRIRFVSPHPQNFPHDLLQLIAQRPNLCSQIH 354
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
+PAQ+G+S+VLERMRRGYTRE+YL+L +IR IP LSSDFI GFCGET+EE ADTL+
Sbjct: 355 MPAQSGSSSVLERMRRGYTRESYLELAHRIRATIPGATLSSDFIVGFCGETDEEFADTLS 414
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV- 492
L+ VG+++ + FAYS+RE+T AHR+ VDDVP+ VK RL L + + + V
Sbjct: 415 LVDEVGFELCFNFAYSLREKTRAHRHLVDDVPQRVKNERLRALNNVYERRRDERLGAMVE 474
Query: 493 -GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G QLVLV +++ D+ +G+SD R A
Sbjct: 475 DGKPQLVLVTQASRRPGDSMWIGRSDGYVRCAL 507
>gi|452825819|gb|EME32814.1| bifunctional enzyme involved in thiolation and methylation of tRNA
[Galdieria sulphuraria]
Length = 594
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/487 (46%), Positives = 314/487 (64%), Gaps = 37/487 (7%)
Query: 35 LP-DGPGLHHFIAQSSL------TASQPLADLAPA---------SEVSSATGSEVHSQGR 78
LP DG L F+A S + +AS L + +V S E+ + +
Sbjct: 65 LPNDGYTLQDFVAASQVRQVGIASASGELRKVQSKVKIGWKGHLGDVRSTPYEELGTCDK 124
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y ETYGCQMNV+D ++V I+ AG+ E+ +A ++ +NTCAIRD AE K+W RL+
Sbjct: 125 VYMETYGCQMNVSDTDVVQEILSKAGF-ELTASLNDATIVLLNTCAIRDKAERKIWHRLD 183
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDAD-KMVDVVCGPDAYRDL 197
+ E K G VLGCMAERLK+K+L+ + ++ D+V GPD+YRDL
Sbjct: 184 ALRQKQTEETKKRIVG-----------VLGCMAERLKEKLLEGEPRLADIVVGPDSYRDL 232
Query: 198 PRLLEEVDYGQK---GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL V G+ N LS++ETYADISPVR+++ ++AF+SVMRGC+N C+FC+VP
Sbjct: 233 PYLLAAVSSGENDAAAYNVQLSMDETYADISPVRLNEQGISAFISVMRGCDNFCTFCVVP 292
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSRPV++IV V L G KEV LLGQNVNSYND S + + ++ S G
Sbjct: 293 YTRGKERSRPVDTIVSHVQRLSDNGFKEVVLLGQNVNSYNDISSGKTD----SHIVYSSG 348
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F+S+ K KK G+ FA+L+ R+ P MR R+TSPHPKDFP+ELL + + PN+C++IHL
Sbjct: 349 FSSVYKPKKKGISFAELIRRVCEVNPNMRVRFTSPHPKDFPEELLDLYNEYPNLCRHIHL 408
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S +L++MRRGYT+E YL LV I++ IP+V SSD I GFCGETE +H +TL L
Sbjct: 409 PVQSGSSNILKKMRRGYTKETYLALVNHIKERIPNVSFSSDLIVGFCGETEFDHQETLDL 468
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRE-STGQCYDSQVG 493
+ V Y A+ FAYS R T A R+ VDDVP + K RRL E+I+ FRE + + ++
Sbjct: 469 LTKVKYSQAFTFAYSERSNTFAARHLVDDVPADTKGRRLQEVIQLFREIADRESIQHEMN 528
Query: 494 TVQLVLV 500
+++LVLV
Sbjct: 529 SLKLVLV 535
>gi|326798175|ref|YP_004315994.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Sphingobacterium sp. 21]
gi|326548939|gb|ADZ77324.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Sphingobacterium sp. 21]
Length = 477
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/448 (50%), Positives = 297/448 (66%), Gaps = 33/448 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN D EIV SI+ + G+S + E A+V+FINTC+IR+ AE +V RL
Sbjct: 32 KLYIESYGCQMNFADSEIVASILLDKGFSTTPDYKE-ADVVFINTCSIRENAEQRVRNRL 90
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
F ++ K P IV VLGCMAERLK K L+ +K+VDVV GPDAYRD
Sbjct: 91 KEF-------------ESAKLKKPGMIVGVLGCMAERLKSKFLEEEKLVDVVVGPDAYRD 137
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+E+VD G + +N LLS EETYADI+PVR++ N VTAF+S+MRGC+NMCSFC+VPFT
Sbjct: 138 LPNLIEKVDDGSRAVNVLLSREETYADINPVRLNTNGVTAFISIMRGCDNMCSFCVVPFT 197
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SIVKE +L+K G +EVTLLGQNV+SY + +E + AN
Sbjct: 198 RGRERSRDPYSIVKEARDLFKAGYREVTLLGQNVDSYKWSP---QEDDAAAN-------- 246
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ FA LL+ ++ P +R R+++ HPKD DE+LY + N+C YIHLP
Sbjct: 247 ------HTTITFAKLLEMVAAVDPLLRVRFSTSHPKDITDEVLYSIARHENICNYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+GNS +LE M R Y R Y++ + I++IIPD +S+D I GFC ETEEEH DTL++M
Sbjct: 301 QSGNSRILELMNRTYDRAWYMERIDTIKRIIPDCAISTDVITGFCSETEEEHQDTLSMMD 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD AYMFAYS R T A + Y DD+PEE+K+RRLTE++E R + QVG +
Sbjct: 361 YVQYDYAYMFAYSERPGTLAAKRYADDIPEEIKKRRLTEVVEKQRAHSLFRLQQQVGKIH 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +K++ D + G++D+ V F
Sbjct: 421 KVLIEGFSKRS-DKDYCGRNDQNAMVVF 447
>gi|325954192|ref|YP_004237852.1| (dimethylallyl)adenosine tRNA methylthiotransferase miaB [Weeksella
virosa DSM 16922]
gi|323436810|gb|ADX67274.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Weeksella
virosa DSM 16922]
Length = 482
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/431 (50%), Positives = 287/431 (66%), Gaps = 27/431 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ GY V E A++I +NTC+IRD AE V RL
Sbjct: 28 KLFLESYGCQMNFSDSEIVASILTEEGYQTTNQVNE-ADLILLNTCSIRDKAEQTVRNRL 86
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
N +K++ +P KI VLGCMAERLK K L+ + +VD+V GPDAYRD
Sbjct: 87 NALNAIKKQ-------------NPSLKIGVLGCMAERLKHKFLEEEHLVDIVVGPDAYRD 133
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP LL EV+ G+ IN LS EETYA+ISP+R+ N VTAFV++ RGC+NMC+FC+VPFT
Sbjct: 134 LPNLLTEVEDGRDAINVQLSKEETYAEISPIRLGGNGVTAFVTITRGCDNMCTFCVVPFT 193
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SI++E+ EL + G KEVTLLGQNV+SY G K+ F
Sbjct: 194 RGRERSRDPHSILREIQELHEAGYKEVTLLGQNVDSYLWYGGGPKK-----------DFK 242
Query: 317 SMCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ +++K + FA LLD ++++FP +R R+++ +P+D D +L M N+CKYIHLP
Sbjct: 243 NATEIQKATAVDFAQLLDMVAMQFPSIRIRFSTSNPQDMKDNVLETMAKHHNICKYIHLP 302
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ VLERM R +TRE Y +L+ KIR+IIPD LS D I GFCGETEEEH DTL+LM
Sbjct: 303 VQSGSTTVLERMNRQHTREQYFELIDKIRKIIPDCALSHDMIAGFCGETEEEHQDTLSLM 362
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V YD YMFAYS R T AH+ DDVP E K+RRL E+I ++ + + + VG
Sbjct: 363 EYVKYDFGYMFAYSDRPGTPAHKKMADDVPAETKKRRLQEIISLQQQHSAERMKAYVGKT 422
Query: 496 QLVLVEGPNKK 506
VL+EG +KK
Sbjct: 423 HEVLIEGNSKK 433
>gi|441500268|ref|ZP_20982435.1| tRNA-i(6)A37 methylthiotransferase [Fulvivirga imtechensis AK7]
gi|441435961|gb|ELR69338.1| tRNA-i(6)A37 methylthiotransferase [Fulvivirga imtechensis AK7]
Length = 488
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/460 (49%), Positives = 303/460 (65%), Gaps = 30/460 (6%)
Query: 68 ATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRD 127
+T + ++Y E+YGCQMN +D EIV SIMK G+ + E A+V+F+NTC+IR+
Sbjct: 27 STDENTGKERKLYIESYGCQMNFSDSEIVSSIMKKEGFDTTSDFNE-ADVVFLNTCSIRE 85
Query: 128 YAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMV 185
AE V RL F +K K+ P+++ VLGCMAERLK ++L+ +K+V
Sbjct: 86 KAEQTVRNRLAQFNTVK--------------KNRPEMMIGVLGCMAERLKSQLLEEEKIV 131
Query: 186 DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCN 245
D+V GPDAYRDLP L+ +VD GQK +NT LS EETYADISPVR++ N VTAF+S+MRGC+
Sbjct: 132 DLVVGPDAYRDLPGLVRQVDDGQKAVNTFLSREETYADISPVRLNSNGVTAFISIMRGCD 191
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
NMCSFC+VPFTRGRERSR SIVKE ++L+ G +EVTLLGQNV+SY + + + +
Sbjct: 192 NMCSFCVVPFTRGRERSRDPHSIVKEAEDLFNNGYREVTLLGQNVDSYKWSPEVNNKAKL 251
Query: 306 GANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
+SE N FA LL+ ++ P++R R+++ HPKD DE+L+ M
Sbjct: 252 EKTADISEIIN-----------FAQLLEMVAGVSPDLRVRFSTSHPKDITDEVLHTMSKY 300
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGET 424
N+C YIHLPAQ+GN+ VLE M R YTRE Y+D V IR+II D G+SSD I GFC ET
Sbjct: 301 ENICNYIHLPAQSGNTRVLELMNRTYTREWYIDRVDAIRRIIGEDCGISSDMIAGFCTET 360
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
EEEH DTL+LM V YD +YMF YS R T A + + DD+P EVK+RRL E+I +E +
Sbjct: 361 EEEHQDTLSLMDYVKYDFSYMFFYSERPGTLAAKKFTDDIPLEVKKRRLNEIIARQQELS 420
Query: 485 GQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +G V VL+EG +K++ D +L G++ V F
Sbjct: 421 LERNKRDIGKVHKVLIEGYSKRSED-QLQGRNSANKVVIF 459
>gi|312129884|ref|YP_003997224.1| tRNA-i(6)a37 thiotransferase enzyme miab [Leadbetterella byssophila
DSM 17132]
gi|311906430|gb|ADQ16871.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leadbetterella byssophila
DSM 17132]
Length = 464
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/455 (49%), Positives = 294/455 (64%), Gaps = 43/455 (9%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
V ++Y E+YGCQMN D E+V SI+++ GYS +V E A++I +NTCAIRD AE +
Sbjct: 21 VSGTKKLYIESYGCQMNFADSEVVASILRSNGYSTTSDVVE-ADLILLNTCAIRDNAEQR 79
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPP--KIVVLGCMAERLKDKILDADKMVDVVCG 190
V RL+ S K P KI VLGCMAERLK K L+ +KMVD+V G
Sbjct: 80 VRNRLSIL--------------NSNKKRNPELKIGVLGCMAERLKTKFLEEEKMVDLVVG 125
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
PDAYRDLP LL EV+ G K +N LS EETYADI+P+R+ N V+AF+S+MRGCNNMCSF
Sbjct: 126 PDAYRDLPNLLAEVEEGHKAVNVFLSREETYADITPIRLDSNGVSAFISIMRGCNNMCSF 185
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
C+VPFTRGRERSR SI KE EL+ +G +EVTLLGQNV+SY
Sbjct: 186 CVVPFTRGRERSRDPYSIEKEAKELFDQGYREVTLLGQNVDSY----------------- 228
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ K + FA+LL++++L P++R R+++ HPKD DE+LY M+ N+C
Sbjct: 229 -------LWKSETEQFTFANLLEKIALIHPDLRIRFSTSHPKDITDEVLYTMKKYDNICN 281
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEEHA 429
YIHLPAQ+G+S +LE M R Y RE YL + +IR+I+ + G+S D I GFC ETEE+H
Sbjct: 282 YIHLPAQSGSSRILELMNRTYDREWYLGKIDRIREILGEECGISHDLIAGFCTETEEDHQ 341
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
DTLTLM V +D YMF YS R T A + Y DDVPEEVK+RRL E+I +E + +
Sbjct: 342 DTLTLMDYVKFDYGYMFYYSERPGTPAAKKYEDDVPEEVKKRRLNEIIAKQQEHSLERNQ 401
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VG V +L+EG +K++ D +L G++D+ V F
Sbjct: 402 MTVGKVYRILIEGESKRS-DEDLCGRTDQNKMVVF 435
>gi|426391397|ref|XP_004062061.1| PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 418
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/369 (56%), Positives = 272/369 (73%), Gaps = 17/369 (4%)
Query: 170 MAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRI 229
MAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+ N LLSL+ETYAD+ PV+
Sbjct: 1 MAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVMPVQT 60
Query: 230 SKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKE----------- 278
S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++EV +L ++
Sbjct: 61 SASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEEVKKLSEQVILPPRPPKVL 120
Query: 279 ---GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL 335
G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA LLD++
Sbjct: 121 GLQGLKEVTLLGQNVNSFRDNS--EVQFNNAVPTNLSRGFTTNYKTKQGGLRFAHLLDQV 178
Query: 336 SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREA 395
S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY+REA
Sbjct: 179 SRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGYSREA 238
Query: 396 YLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTH 455
Y++LV IR+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR++T
Sbjct: 239 YVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMRQKTR 298
Query: 456 AHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGK 515
A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++ T+L G+
Sbjct: 299 AYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQLVLVEGLSKRSA-TDLCGR 357
Query: 516 SDRGHRVAF 524
+D +V F
Sbjct: 358 NDGNLKVIF 366
>gi|308800958|ref|XP_003075260.1| Predicted Fe-S oxidoreductase (ISS) [Ostreococcus tauri]
gi|116061814|emb|CAL52532.1| Predicted Fe-S oxidoreductase (ISS) [Ostreococcus tauri]
Length = 548
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/466 (47%), Positives = 307/466 (65%), Gaps = 43/466 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R++ ETYGCQMN ND ++V +++ A ++ + + +A V+ +NTCAIR+ AE +VW RL
Sbjct: 44 RVFVETYGCQMNANDSDVVRALLVEAKHA-IASSASDATVVLVNTCAIRENAESRVWTRL 102
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK-MVDVVCGPDAYRD 196
A R+ + VLGCMAERLK KIL A++ + D+V GPDAYRD
Sbjct: 103 RQLR----------AERRAPGSRLRAVGVLGCMAERLKGKILSAEEGLADMVVGPDAYRD 152
Query: 197 LPRLL----EEVDYGQKG------------INTLLSLEETYADISPVRISKNSVTAFVSV 240
+ RLL EE D ++ +N +LSL+ETYAD+ P+R S A+VSV
Sbjct: 153 VVRLLRVAREESDRRRQRETRANTLDDEDRMNVMLSLDETYADVFPLRADPMSPQAYVSV 212
Query: 241 MRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGME 300
RGC+NMC+FC+VPFTRGRERSRP ES+++E +L +GVKE+TLLGQNVNSY D S +
Sbjct: 213 TRGCDNMCAFCVVPFTRGRERSRPFESVLEECRKLIDQGVKEITLLGQNVNSYADASEVG 272
Query: 301 KEVEPGANWRL---SEGFNSMCKVKKMGLR-FADLLDRLSLEFPEMRFRYTSPHPKDFPD 356
+ A+ ++GF S+ K K++G R FADL++ ++ E R R+TSPHPKDFPD
Sbjct: 273 TSAKTDADAPFGAYAKGFTSVYKPKRVGARAFADLVEAVAAIDVECRVRFTSPHPKDFPD 332
Query: 357 ELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDF 416
+LL ++ + PNVCK +H+PAQ+G+++ LERMRRGYTREAYL+L+++ R+IIP V +SSDF
Sbjct: 333 DLLRVIANTPNVCKQLHMPAQSGSTSTLERMRRGYTREAYLELIERAREIIPGVAISSDF 392
Query: 417 ICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
I GFCGE+E+EHA+TLTL++ V Y+ A R PEEVK+RRL E+
Sbjct: 393 ISGFCGESEDEHAETLTLLETVRYEHARTRRGLRRR-----------RPEEVKKRRLAEV 441
Query: 477 IEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
IE FR +VG LVL+EG +KK P++++ G+SD G RV
Sbjct: 442 IETFRRCAADVNAREVGCTHLVLIEGASKKNPESQMSGRSDTGKRV 487
>gi|392965044|ref|ZP_10330464.1| RNA modification enzyme, MiaB family [Fibrisoma limi BUZ 3]
gi|387846427|emb|CCH52510.1| RNA modification enzyme, MiaB family [Fibrisoma limi BUZ 3]
Length = 475
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/481 (49%), Positives = 315/481 (65%), Gaps = 46/481 (9%)
Query: 49 SLTASQP----LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAG 104
+LT QP DL SE ATG + R+Y E+YGCQMN D EIV ++M+NAG
Sbjct: 7 TLTILQPEDKEAIDLPRTSEDELATGKK-----RLYIESYGCQMNFADSEIVAAVMRNAG 61
Query: 105 YSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKI 164
++ + E A++IF+NTCAIR+ AE KV RL + LKR K ++ G
Sbjct: 62 FA-TTSSAEEADLIFLNTCAIRENAEQKVRNRLQHLNALKRR-KPDLLVG---------- 109
Query: 165 VVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADI 224
+LGCMAERLK K+L+ +K+VD+V GPDAYRD+P+L+EE + GQK +N LS EETYADI
Sbjct: 110 -MLGCMAERLKTKLLEEEKVVDIVAGPDAYRDIPKLVEEAESGQKAVNVFLSREETYADI 168
Query: 225 SPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVT 284
+P+R++ N VTAFVS+MRGC+NMCSFC+VPFTRGRERSR SIV+E + L +G KEVT
Sbjct: 169 APIRLNSNGVTAFVSIMRGCDNMCSFCVVPFTRGRERSRDPHSIVREAEALLADGFKEVT 228
Query: 285 LLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRF 344
LLGQNV+SY W + S + FA LL+R++L P++R
Sbjct: 229 LLGQNVDSY--------------KWASEDSTES--------VNFAQLLERVALISPDLRV 266
Query: 345 RYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIR 404
R+++ HPKD DE+LY M N+C YIHLPAQ+GNS VL+ M R Y R Y++ + IR
Sbjct: 267 RFSTSHPKDITDEVLYTMARYDNICNYIHLPAQSGNSRVLKLMNRTYDRPWYIEKINSIR 326
Query: 405 QII-PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDD 463
+I+ D G+S+D I GFC ETEEEH +TL+LM+ V YD AYMFAYS R T A + Y DD
Sbjct: 327 RILGEDCGISTDMISGFCTETEEEHQETLSLMEYVRYDYAYMFAYSERPGTLAAKKYTDD 386
Query: 464 VPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVA 523
+PE+VK+RRL E+I ++ + + VG VQ VL+EG +K++ D L G++D+ V
Sbjct: 387 IPEDVKKRRLNEIIALQQQHSAERNRRHVGKVQRVLIEGTSKRSDDF-LCGRNDQNKMVV 445
Query: 524 F 524
F
Sbjct: 446 F 446
>gi|349605411|gb|AEQ00659.1| CDK5 regulatory subunit-associated protein 1-like protein, partial
[Equus caballus]
Length = 399
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/350 (58%), Positives = 269/350 (76%), Gaps = 3/350 (0%)
Query: 175 KDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSV 234
K++IL+ +K+VD++ GPDAYRDLPRLL + GQ+ N LLSL+ETYADI PV+ S ++
Sbjct: 1 KEEILNREKIVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADIMPVQTSPSAT 60
Query: 235 TAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN 294
+AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SIV+EV +L ++G+KEVTLLGQNVNS+
Sbjct: 61 SAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASIVEEVRKLSEQGLKEVTLLGQNVNSFR 120
Query: 295 DTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDF 354
D S E + + LS GF++ K K+ GLRFA LLD++S PEMR R+TSPHPKDF
Sbjct: 121 DNS--EVQFNNAMSTSLSRGFSTNYKTKQGGLRFAHLLDQVSRIDPEMRIRFTSPHPKDF 178
Query: 355 PDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSS 414
PDE+L ++ +R N+CK IH+PAQ+G+S VLE MRRGY+REAY++L+ IR+ IP V LSS
Sbjct: 179 PDEVLQLIHERDNICKQIHVPAQSGSSRVLEAMRRGYSREAYVELIHHIRESIPGVSLSS 238
Query: 415 DFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLT 474
DFI GFCGETEE+H T++L++ V Y+M ++FAYSMR++T A+ DDVPEEVK RRL
Sbjct: 239 DFIAGFCGETEEDHLQTVSLLREVQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLE 298
Query: 475 ELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
ELI FR+ + + VG QLVLVEG +K++ T+L G++D +V F
Sbjct: 299 ELITVFRKEATKANKTSVGCTQLVLVEGHSKRS-STDLCGRNDGNLKVIF 347
>gi|311747597|ref|ZP_07721382.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Algoriphagus sp. PR1]
gi|126575579|gb|EAZ79889.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Algoriphagus sp. PR1]
Length = 492
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/458 (49%), Positives = 299/458 (65%), Gaps = 25/458 (5%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
A A + + ++Y E+YGCQMN +D EIV SIMK G+ + + A+VIF
Sbjct: 16 AQACDFKTTVDENTGKSRKLYIESYGCQMNFSDSEIVASIMKENGFDTTSDFNQ-ADVIF 74
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
+NTC+IR+ AE V +RL F KR +K I VLGCMAERLKDK+L
Sbjct: 75 LNTCSIREKAELTVRKRLTDFNKAKR------------NKPEMTIGVLGCMAERLKDKLL 122
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS 239
+ +K+VDVV GPDAYRDLP L+ + G KG+NT LS EETYADI+PVR++ N VTAF+S
Sbjct: 123 EEEKIVDVVVGPDAYRDLPNLVSSAEDGNKGVNTFLSREETYADIAPVRLNSNGVTAFIS 182
Query: 240 VMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGM 299
+MRGC+NMCSFC+VPFTRGRERSR SIV E +L+ +G KEVTLLGQNV+SY +
Sbjct: 183 IMRGCDNMCSFCVVPFTRGRERSRDPHSIVAEAQDLYAKGYKEVTLLGQNVDSYKWSP-- 240
Query: 300 EKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELL 359
E RL++ ++ V + FA+LL+ ++ P +R R+++ HPKD DE+L
Sbjct: 241 ----EENNKARLNKKEEAVSSV----INFANLLEMVAQVSPTLRVRFSTSHPKDITDEVL 292
Query: 360 YIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPD-VGLSSDFIC 418
Y M+ N+CKYIHLP Q+GNS VL+ M R Y RE YL+ V+ IR I+ D G+SSD I
Sbjct: 293 YTMKKYDNICKYIHLPVQSGNSRVLDLMNRTYDREWYLNRVESIRNILGDECGISSDMIA 352
Query: 419 GFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIE 478
GFC ETEEEH DTLTLM V YD +YMF YS R T A + Y DD+P EVK+RRL E+I
Sbjct: 353 GFCSETEEEHQDTLTLMDIVKYDFSYMFFYSERPGTLAAKKYEDDIPLEVKKRRLAEIIS 412
Query: 479 AFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
+ + + +G Q++L+EG +KK+ D E G++
Sbjct: 413 KQSKLSHERNKLDIGKEQVILIEGISKKS-DQEYRGRN 449
>gi|256424882|ref|YP_003125535.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chitinophaga
pinensis DSM 2588]
gi|256039790|gb|ACU63334.1| RNA modification enzyme, MiaB family [Chitinophaga pinensis DSM
2588]
Length = 473
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/448 (49%), Positives = 293/448 (65%), Gaps = 37/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y E+YGCQMN ND EIV SI+K G+ NV E A ++ +NTC+IR+ AE V +RL
Sbjct: 31 KFYIESYGCQMNFNDSEIVASILKEEGFGPTRNV-EEASLVLLNTCSIREKAETTVRKRL 89
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
F +K+ ++P +V VLGCMAERLK K+L+ +K+VD+V GPDAYR
Sbjct: 90 TEFRKIKQ-------------RNPELLVGVLGCMAERLKAKLLEEEKLVDMVVGPDAYRT 136
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+EE + GQK +N LLS EETY DISPVR+ N VTAFVS+MRGCNNMCSFC+VPFT
Sbjct: 137 LPALIEEAETGQKAVNVLLSREETYGDISPVRLDSNGVTAFVSIMRGCNNMCSFCVVPFT 196
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SI++E +++ G +EVTLLGQNV+SY W + N
Sbjct: 197 RGRERSRDKASILQEATDMFNRGYREVTLLGQNVDSY--------------YWVSPDNDN 242
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ FA+LL+ ++L P +R R+++ HPKD D++LY M N+CKYIHLP
Sbjct: 243 DITT-------FANLLEAVALISPLLRVRFSTSHPKDITDDVLYTMAKYENICKYIHLPM 295
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R YTRE Y+ V +IR+I+P LS+D I GFC ETEE+H DT+TLM
Sbjct: 296 QSGSTRILQLMNRTYTREWYIKKVDRIREILPGCALSTDVITGFCTETEEDHQDTMTLMD 355
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
YD+AYMF YS R T A R Y DDVPEEVK+RRL+E+++ R + + VG
Sbjct: 356 YGQYDLAYMFFYSERPGTLAARRYQDDVPEEVKKRRLSEIVDLHRAQSLKSMQQDVGKTF 415
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +K++ D +L G++D V F
Sbjct: 416 KVLIEGVSKRSED-QLFGRTDHNKVVVF 442
>gi|384249320|gb|EIE22802.1| hypothetical protein COCSUDRAFT_29412 [Coccomyxa subellipsoidea
C-169]
Length = 514
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/443 (48%), Positives = 296/443 (66%), Gaps = 20/443 (4%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN +D EI+ I+ G++ + P A+VI +NTCAIR+ AE K++ RL LK+
Sbjct: 1 MNSSDTEILRGILAQHGFTRADD-PAGADVILLNTCAIREKAEQKIFSRLGEIKALKKT- 58
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
R + P + V+GCMAERLKD++ + K+VD+V GPDA+R LP L+ G
Sbjct: 59 -------RDSERMPVCVGVIGCMAERLKDQLFE-QKVVDIVAGPDAFRSLPGLIHLFTQG 110
Query: 208 QKG-----INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERS 262
+ G IN LS EETYAD+ PVR +V+A VS+MRGCNNMCSFCIVPFTRGRERS
Sbjct: 111 RDGEDNDLINVQLSTEETYADVRPVR-EVGAVSAAVSIMRGCNNMCSFCIVPFTRGRERS 169
Query: 263 RPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV--EPGANWRLSEGFNSMCK 320
RP SI+ EV +L +EG KEV LLGQNVNSY D SG E+ + +EGF+S+ K
Sbjct: 170 RPAASILAEVKQLHEEGCKEVLLLGQNVNSYADLSGSERASTGNEASTSYYAEGFSSVYK 229
Query: 321 VKKMG-LRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
++ G + F +LL+ ++ PEMR R+TSPHPKDF DE+L ++ N+CK +H+PAQ+G
Sbjct: 230 PRREGAIPFGELLEAVAKAVPEMRIRFTSPHPKDFSDEVLQVIAKHSNICKNLHMPAQSG 289
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ VL M+RGYTREAY LV++ R ++P++ LS+D I GFCGE EE+H TL L++ G
Sbjct: 290 STRVLSGMKRGYTREAYDALVERARALMPEIALSTDIIVGFCGEEEEDHQGTLDLLRTAG 349
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
YD A++FAYS R++THA R+ DDVP++VK RRL E I ++E ++V LVL
Sbjct: 350 YDQAFLFAYSKRDKTHAARHLQDDVPQDVKMRRLNEAIHVYKEVLTARNQAEVSCRHLVL 409
Query: 500 VEGPNKKAPDTELVGKSDRGHRV 522
VEGP++++P L G++ G RV
Sbjct: 410 VEGPSRRSPSI-LTGRTCTGKRV 431
>gi|373955798|ref|ZP_09615758.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Mucilaginibacter paludis DSM 18603]
gi|373892398|gb|EHQ28295.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Mucilaginibacter paludis DSM 18603]
Length = 498
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/459 (48%), Positives = 303/459 (66%), Gaps = 35/459 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGC MN +D EIV SI+ + G+ + NA+VIFINTC+IR+ AE +V RL
Sbjct: 33 KLYIESYGCAMNFSDSEIVASILLDQGFETTTDF-NNADVIFINTCSIRENAEQRVRNRL 91
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
F K+ ++P +V VLGCMAERLK K L+ +K+VDVV GPDAYRD
Sbjct: 92 KEFKVAKK-------------RNPGMVVGVLGCMAERLKSKFLEEEKLVDVVVGPDAYRD 138
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+++VD GQ+ +N LLS EETYADI+PVR++ N + AFVS+MRGC+NMCSFC+VPFT
Sbjct: 139 LPNLIDQVDSGQRAVNVLLSREETYADINPVRLNSNGINAFVSIMRGCDNMCSFCVVPFT 198
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SIVKE +L+ +G +EVTLLGQNV+SY + EP EGF+
Sbjct: 199 RGRERSRDAISIVKECTDLFNQGYREVTLLGQNVDSY--------KWEPLPILPGMEGFD 250
Query: 317 ---SMCKVKKMG--------LRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
S KV G + FA LL+ ++L P++R R+++ HPKD DE+LY +
Sbjct: 251 KESSDQKVSPTGGDLEGAPVVNFARLLELVALINPDLRVRFSTSHPKDITDEVLYTIARY 310
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETE 425
N+C YIHLP Q+GNS +LE M R Y R+ Y+D + IR+IIP +S+D I GFC ET+
Sbjct: 311 DNICNYIHLPVQSGNSRILEMMNRTYDRDWYIDRIDAIRRIIPGCAISTDVITGFCTETD 370
Query: 426 EEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG 485
EEH DT+++M V YD AYMF YS R T A + Y DD+PE+VK+ RL E++ ++ +
Sbjct: 371 EEHQDTVSMMDYVQYDFAYMFMYSERPGTLAAKRYADDIPEDVKKTRLQEIVAKQQQYSL 430
Query: 486 QCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+Q+G VQ VL+EG +KK+ D + G+SD+ V F
Sbjct: 431 VRLQAQLGKVQKVLIEGYSKKS-DRDYCGRSDQNAMVIF 468
>gi|307200648|gb|EFN80756.1| CDK5 regulatory subunit-associated protein 1 [Harpegnathos
saltator]
Length = 1337
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/474 (47%), Positives = 295/474 (62%), Gaps = 65/474 (13%)
Query: 50 LTASQPLADLAPASEVSSATGSEVHSQG-RIYQETYGCQMNVNDMEIVLSIMKNAGYSEV 108
+T P D++P E S ++ +G ++Y E YGCQMNVND EI+ SI+K GY +
Sbjct: 44 ITPEPPRIDISP--EESIPYVQDIRGEGQKVYFEIYGCQMNVNDTEIIWSILKARGYQQT 101
Query: 109 INVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLG 168
++ E A+++ + TC+IRD AE KVW +L Y ++ + +K KI +LG
Sbjct: 102 KDM-EGADIVLLITCSIRDNAEQKVWNKLEYLNVIRNKRRKKSGVSM-------KIGLLG 153
Query: 169 CMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVR 228
CMAERLK KILD K+VDV+ GPD+Y+DLPRLL D + +N +LS +ETYAD+ P
Sbjct: 154 CMAERLKTKILDKGKLVDVIAGPDSYKDLPRLLAVTD-SETAVNVVLSFDETYADVMP-- 210
Query: 229 ISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQ 288
G+KEVTLLGQ
Sbjct: 211 --------------------------------------------------GIKEVTLLGQ 220
Query: 289 NVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTS 348
NVNSY D S ++ V G L++GF ++ K KK GLRF DLLD++SL PEMR R+TS
Sbjct: 221 NVNSYRDLSQLQFVVPVGTGTHLAKGFKTVYKGKKGGLRFCDLLDKVSLIDPEMRVRFTS 280
Query: 349 PHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIP 408
PHPKDFPDE+L+++ +RPN+CK IHLPAQ+GNSAVL RMRRGYTREAYLDLV IR I+P
Sbjct: 281 PHPKDFPDEVLHLIAERPNICKQIHLPAQSGNSAVLVRMRRGYTREAYLDLVHNIRDILP 340
Query: 409 DVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEV 468
DV LS+DFI GFCGETEEE DTL+L++ V Y+ AYMFAYSMRE+T AHR Y DDV + V
Sbjct: 341 DVYLSADFIAGFCGETEEEFQDTLSLLEQVKYNYAYMFAYSMREKTTAHRRYKDDVEQRV 400
Query: 469 KQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
K R+ +I +R + +Q+G QLVLVEG +++ D L G++D R+
Sbjct: 401 KIERVARMITLYRREAEKLNKAQIGQRQLVLVEGVSRRT-DRNLQGRNDGNVRI 453
>gi|408674988|ref|YP_006874736.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Emticicia
oligotrophica DSM 17448]
gi|387856612|gb|AFK04709.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Emticicia
oligotrophica DSM 17448]
Length = 477
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/468 (47%), Positives = 309/468 (66%), Gaps = 40/468 (8%)
Query: 58 DLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEV 117
D+A SE +T ++ ++Y E+YGCQMN D EIV SI++ ++ + E AE+
Sbjct: 20 DVARISEDEIST-----AKRKLYIESYGCQMNFADSEIVASILRENDFATTSKIEE-AEL 73
Query: 118 IFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDK 177
I +NTCAIR+ AE KV RL + +K++ +KNV KI +LGCMAERLK K
Sbjct: 74 ILLNTCAIRENAEQKVRHRLQHLVPMKQK-RKNV-----------KIGILGCMAERLKTK 121
Query: 178 ILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAF 237
+L+ +K+VD+V GPDAYRDLP L+ EV+ GQK +N LS EETYADI+P+R+ N VTAF
Sbjct: 122 LLEEEKVVDMVVGPDAYRDLPNLINEVEDGQKAVNVFLSREETYADITPIRLDSNGVTAF 181
Query: 238 VSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTS 297
+S+MRGC+NMCSFC+VP+TRGRERSR SIVKE EL+++G +EVTLLGQNV+SY
Sbjct: 182 ISIMRGCDNMCSFCVVPYTRGRERSRDPHSIVKEATELFEQGYREVTLLGQNVDSY---- 237
Query: 298 GMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDE 357
W+ +E ++ + FA+LL+ ++L P++R R+++ HPKD DE
Sbjct: 238 ----------KWKSTE------TAQENIVTFANLLEMVALVNPDLRVRFSTSHPKDITDE 281
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDF 416
+LY ++ N+CKYIHLPAQ+G+S +LE M R Y RE Y+ + +IR+I+ + G+S D
Sbjct: 282 VLYTIKKYDNICKYIHLPAQSGSSRILELMNRTYDREWYIGKIDRIREILGEECGISQDM 341
Query: 417 ICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
I GFC ETEE+H DTL+LM V YD YMFAYS R T A + DDVP E+K RRL E+
Sbjct: 342 IAGFCTETEEDHQDTLSLMDYVKYDYGYMFAYSERPNTPAAKKLQDDVPNEIKNRRLAEI 401
Query: 477 IEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
I RE + + +G V VL+EG +K++ + L G++D+ + F
Sbjct: 402 IAKQREHSLERNQMSIGKVYKVLIEGFSKRS-NEHLSGRNDQNKMIIF 448
>gi|124002076|ref|ZP_01686930.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Microscilla marina ATCC
23134]
gi|123992542|gb|EAY31887.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Microscilla marina ATCC
23134]
Length = 493
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/457 (48%), Positives = 304/457 (66%), Gaps = 36/457 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SIM G+ V +NA+V+ +NTCAIRD AE +V RL
Sbjct: 35 KLYIESYGCQMNFSDSEIVASIMSEHGFDTTSEV-DNADVVLLNTCAIRDNAEQRVRNRL 93
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+K +K P +V VLGCMAERLK ++L+ ++MVD+V GPD+YRD
Sbjct: 94 RNLNHIK-------------NKKPGMVVGVLGCMAERLKKRLLEEEQMVDIVAGPDSYRD 140
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP+L+ + D GQ+ +N LS +ETYADI+PVR++ N VTAF+S+MRGC+NMCSFC+VPFT
Sbjct: 141 LPQLVLQADEGQEAVNVFLSRDETYADIAPVRLNSNGVTAFISIMRGCDNMCSFCVVPFT 200
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTS--------GMEKEVEPGAN 308
RGRERSR S+VKE +L+ +G +EVTLLGQNV+SY +S G +K V+ GA+
Sbjct: 201 RGRERSRDPYSVVKEAQDLFDKGYREVTLLGQNVDSYLWSSNPDVISLLGEKKAVKKGAD 260
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ + FA LL++++L P++R R+++ HPKD +++L+ M N+
Sbjct: 261 LTGVDIVD-----------FAGLLEKVALVSPDLRIRFSTSHPKDITEDVLHTMAKYENI 309
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEE 427
CKYIHLP Q+GNS VL+ M RGYTRE YL++V IR+I+ + G+SSD I GFC ET+EE
Sbjct: 310 CKYIHLPVQSGNSRVLDAMNRGYTRERYLEIVASIRRILGEECGISSDMIAGFCTETDEE 369
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
H DTLTLMK V YD +YMF YS R T A + DDVP EVK++RL E+I +E + +
Sbjct: 370 HQDTLTLMKEVKYDFSYMFYYSERPNTTAAKKMEDDVPLEVKKKRLQEIIALQQELSLKR 429
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G V VLVEG +K++ D L G++ V F
Sbjct: 430 NQQDIGKVHKVLVEGFSKRSDDY-LKGRNTANKMVIF 465
>gi|372210059|ref|ZP_09497861.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Flavobacteriaceae bacterium S85]
Length = 482
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/448 (47%), Positives = 306/448 (68%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN+ND EIV +I+ GY+ N+ E A+++ +NTC+IR+ AE V +RL
Sbjct: 31 KLYLESYGCQMNMNDSEIVAAILSEQGYNTTTNLNE-ADLVMVNTCSIREKAEQTVRKRL 89
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +K K N A K+ VLGCMAERLK K LD +K+VD+V GPDAYRDL
Sbjct: 90 EKYNAVK---KINPAM---------KVGVLGCMAERLKAKFLDEEKIVDLVVGPDAYRDL 137
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G+ +N LLS +ETYAD+SPVR++ N V+AFV++ RGC+NMC+FC+VPFTR
Sbjct: 138 PNLLSEVEDGRDAVNVLLSRDETYADVSPVRLNSNGVSAFVTITRGCDNMCTFCVVPFTR 197
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI+ E+ +L +G KE+TLLGQNV+SY G++K+ + +
Sbjct: 198 GRERSRDPQSIISEIQDLVTKGYKEITLLGQNVDSYLWYGGGLKKDFDKAS--------- 248
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
++ K +G FADLL ++ FP+ R R+ + +P+D E+L+ M PN+C+Y+HLP
Sbjct: 249 AIAKATAVG--FADLLKMVASSFPKTRVRFHTNNPQDMDLEVLHTMVTYPNICRYLHLPV 306
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ VL+RM R +TRE Y++L+ +R+++PD +S D I GFCGETEEEH DTL+LM+
Sbjct: 307 QSGSTTVLKRMNRQHTREEYIELIDNVRKLLPDCAISQDMIVGFCGETEEEHQDTLSLME 366
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A + + DDVP +VK+RRLTE+I RE + + S +G
Sbjct: 367 YVNYDYGFMFAYSERPGTLAEKKFPDDVPNDVKKRRLTEVINLQRELSLKNTQSYMGKTV 426
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ + +G++ + + V F
Sbjct: 427 EVLIEGNSKKS-EAHWMGRNSQNYAVVF 453
>gi|402832215|ref|ZP_10880868.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. CM59]
gi|402278121|gb|EJU27186.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. CM59]
Length = 481
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/450 (47%), Positives = 301/450 (66%), Gaps = 30/450 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ G++ N+ E A+++ INTC++R+ AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILHKVGFNTTENLQE-ADLVLINTCSVREKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP--KIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
F +KR H P K+ VLGCMAERLK + L+ + +VD+V GPDAY+
Sbjct: 84 EQFNAVKR--------------HKPAMKVGVLGCMAERLKHQFLEEEHIVDLVVGPDAYK 129
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLP LLEEVD G+ +N LLS +ETYADISP+R++ N VTAFVS+ RGC+NMC+FCIVPF
Sbjct: 130 DLPNLLEEVDNGRDAVNVLLSRDETYADISPIRLNSNGVTAFVSITRGCDNMCTFCIVPF 189
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEG 314
TRGRERSR SI+ E+++LW+ G KEVTLLGQNV+SY G++K+ E ++ +
Sbjct: 190 TRGRERSRDPHSIIHEIEDLWQRGFKEVTLLGQNVDSYLWYGGGLKKDFEKASDIQ---- 245
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
K + FA LLD ++ +FP+MR R+++ +P+D +++ M N+CKYIHL
Sbjct: 246 -------KVTAVNFAKLLDMVATQFPKMRIRFSTSNPQDMTLDVIDTMAKHHNICKYIHL 298
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R +TRE Y L+ IRQ IP+ +S D I GF ETEE+H DTL+L
Sbjct: 299 PVQSGSNRILKAMNRLHTREEYFALIDGIRQRIPECAISQDMITGFPSETEEDHQDTLSL 358
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
M+ V YD +MFAYS R T A R DDVPEEVK+RRLTE+I+ ++ + +QVG
Sbjct: 359 MEYVKYDFGFMFAYSERPGTLAARKIADDVPEEVKKRRLTEIIDLQQKHSLYRTQAQVGK 418
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D E +G++ + V F
Sbjct: 419 TVEVLIEGNSKKS-DQEWMGRNTQNTVVVF 447
>gi|406660591|ref|ZP_11068722.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Cecembia
lonarensis LW9]
gi|405555736|gb|EKB50748.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Cecembia
lonarensis LW9]
Length = 487
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/460 (49%), Positives = 304/460 (66%), Gaps = 25/460 (5%)
Query: 58 DLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEV 117
D A A + + ++Y E+YGCQMN +D EIV SIMK G+ + E A+V
Sbjct: 14 DEAQACDFKTTEEENTGKSKKLYIESYGCQMNFSDSEIVASIMKENGFDTTSDF-EQADV 72
Query: 118 IFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDK 177
IF+NTC+IR+ AE V RLN F +K+ +K I VLGCMAERLK+K
Sbjct: 73 IFLNTCSIREKAEQTVRNRLNQFNTVKK------------NKPELTIGVLGCMAERLKEK 120
Query: 178 ILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAF 237
+L+ +K+VDVV GPDAYRDLP L+ + G KG+NT LS EETYADISPVR++ N VTAF
Sbjct: 121 LLEEEKIVDVVVGPDAYRDLPNLVASAEEGNKGVNTFLSREETYADISPVRLNSNGVTAF 180
Query: 238 VSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTS 297
+S+MRGC+NMCSFC+VPFTRGRERSR SIV E EL+++G KEVTLLGQNV+SY +
Sbjct: 181 ISIMRGCDNMCSFCVVPFTRGRERSRDPYSIVNEAKELFEKGYKEVTLLGQNVDSYKWSP 240
Query: 298 GMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDE 357
E RL++ + + + + FA LL+ ++L P +R R+++ HPKD DE
Sbjct: 241 ------EENNKARLNKKEDEVSTL----VNFAKLLEMVALVDPALRIRFSTSHPKDITDE 290
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDF 416
+LY M+ N+CKYIHLP Q+GNS VLE M R Y R+ YLD V+ IR+I+ + G+SSD
Sbjct: 291 VLYTMKKYDNICKYIHLPVQSGNSRVLELMNRTYDRDWYLDRVRAIREILGEECGISSDM 350
Query: 417 ICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
I GFC ETEEEH DTLTLM V YD +YMF YS R T A + Y DD+P EVK+RRL E+
Sbjct: 351 IAGFCTETEEEHQDTLTLMDIVKYDFSYMFYYSERPGTLAAKKYTDDIPLEVKKRRLAEI 410
Query: 477 IEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
IE + + +G +Q +L+EG +K++ + +L G++
Sbjct: 411 IEKQNSLSLERNKLDIGKIQEILIEGTSKRS-EAQLKGRN 449
>gi|300770384|ref|ZP_07080263.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762860|gb|EFK59677.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Sphingobacterium
spiritivorum ATCC 33861]
Length = 478
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/477 (49%), Positives = 311/477 (65%), Gaps = 34/477 (7%)
Query: 50 LTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIVLSIMKNAGYSEV 108
L+ S D + E S +S GR +Y E+YGCQMN +D EIV SI+ + G+
Sbjct: 4 LSHSTKEHDESRQGEALQLEASAENSNGRKLYIESYGCQMNFSDSEIVASILMDKGFETT 63
Query: 109 INVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VL 167
+ E A+V+FINTC+IR+ AE +V RL F F K SK+P IV VL
Sbjct: 64 KDFNE-ADVVFINTCSIRENAETRVRNRLKEFEFAK-------------SKNPGMIVGVL 109
Query: 168 GCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV 227
GCMAERLK K L+ +K+VDVV GPDAYRDLP L+E+VD G K +N LLS EETYADI+PV
Sbjct: 110 GCMAERLKSKFLEEEKLVDVVVGPDAYRDLPNLIEQVDDGAKAVNVLLSREETYADINPV 169
Query: 228 RISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLG 287
R++ N +TAF+S+MRGC+NMCSFC+VPFTRGRERSR V+SI+KE +L+ G +EVTLLG
Sbjct: 170 RLNTNGITAFISIMRGCDNMCSFCVVPFTRGRERSRDVDSIIKEAQDLFNAGYREVTLLG 229
Query: 288 QNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYT 347
QNV+SY T+ + + P +E N FA LL +++ P +R R++
Sbjct: 230 QNVDSYKFTAPVAEGESP------AEPVN-----------FAQLLAKVADVSPLLRVRFS 272
Query: 348 SPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII 407
+ HPKD DE+L+ M N+C YIHLP Q+GNS VLE M R Y R Y+D V IR+I+
Sbjct: 273 TSHPKDITDEVLHTMARYENICNYIHLPVQSGNSRVLELMNRTYDRAWYIDRVDAIRRIL 332
Query: 408 PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEE 467
P+ G+S+D I GFC ETEEEH +TL++M V YD AYMFAYS R T A + Y DD+PEE
Sbjct: 333 PECGISTDVITGFCTETEEEHQETLSMMDYVKYDYAYMFAYSERPGTLAAKRYEDDIPEE 392
Query: 468 VKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+K+RRLTE++ R + + VG V +L+EG +K++ D + G++D+ V F
Sbjct: 393 IKKRRLTEVVAKQRLHSHYRIQNFVGKVHKILIEGYSKRS-DQDFAGRNDQNAMVVF 448
>gi|227538855|ref|ZP_03968904.1| 2-methylthioadenine synthetase [Sphingobacterium spiritivorum ATCC
33300]
gi|227241364|gb|EEI91379.1| 2-methylthioadenine synthetase [Sphingobacterium spiritivorum ATCC
33300]
Length = 478
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/477 (49%), Positives = 311/477 (65%), Gaps = 34/477 (7%)
Query: 50 LTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIVLSIMKNAGYSEV 108
L+ S D + E S +S GR +Y E+YGCQMN +D EIV SI+ + G+
Sbjct: 4 LSHSTKEHDESRQGEALQLEASAENSNGRKLYIESYGCQMNFSDSEIVASILMDKGFETT 63
Query: 109 INVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VL 167
+ E A+V+FINTC+IR+ AE +V RL F F K SK+P IV VL
Sbjct: 64 KDFNE-ADVVFINTCSIRENAETRVRNRLKEFEFAK-------------SKNPGMIVGVL 109
Query: 168 GCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV 227
GCMAERLK K L+ +K+VDVV GPDAYRDLP L+E+VD G K +N LLS EETYADI+PV
Sbjct: 110 GCMAERLKSKFLEEEKLVDVVVGPDAYRDLPNLIEQVDDGAKAVNVLLSREETYADINPV 169
Query: 228 RISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLG 287
R++ N +TAF+S+MRGC+NMCSFC+VPFTRGRERSR V+SI+KE +L+ G +EVTLLG
Sbjct: 170 RLNTNGITAFISIMRGCDNMCSFCVVPFTRGRERSRDVDSIIKEAQDLFNAGYREVTLLG 229
Query: 288 QNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYT 347
QNV+SY T+ + + P +E N FA LL +++ P +R R++
Sbjct: 230 QNVDSYKFTAPVAEGESP------AEPVN-----------FAQLLAKVADVSPLLRVRFS 272
Query: 348 SPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII 407
+ HPKD DE+L+ M N+C YIHLP Q+GNS VLE M R Y R Y+D V IR+I+
Sbjct: 273 TSHPKDITDEVLHTMARYENICNYIHLPVQSGNSRVLELMNRTYDRAWYIDRVDAIRRIL 332
Query: 408 PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEE 467
P+ G+S+D I GFC ETEEEH +TL++M V YD AYMFAYS R T A + Y DD+PEE
Sbjct: 333 PECGISTDVITGFCTETEEEHQETLSMMDYVKYDYAYMFAYSERPGTLAAKRYEDDIPEE 392
Query: 468 VKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+K+RRLTE++ R + + VG V +L+EG +K++ D + G++D+ V F
Sbjct: 393 IKKRRLTEVVAKQRLHSHYRIQNFVGKVHKILIEGYSKRS-DQDFAGRNDQNAMVVF 448
>gi|407451339|ref|YP_006723063.1| 2-methylthioadenine synthetase [Riemerella anatipestifer RA-CH-1]
gi|403312323|gb|AFR35164.1| 2-methylthioadenine synthetase [Riemerella anatipestifer RA-CH-1]
Length = 477
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/430 (49%), Positives = 290/430 (67%), Gaps = 25/430 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ + GY+ + V E A++I +NTC+IR+ AE V RL
Sbjct: 26 KLFLESYGCQMNFSDSEIVASILNDEGYNTTLKV-EEADLILLNTCSIREKAEQTVRMRL 84
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ F LK+E K + G VLGCMAERLK K L+ +++VD+V GPDAYRDL
Sbjct: 85 SQFKNLKKE-KPGLTVG-----------VLGCMAERLKTKFLEEEQLVDLVVGPDAYRDL 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL+E + G+ IN +LS EETYADI+PVR+ N VTAFV++ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLLKETEDGRDAINVILSKEETYADINPVRLGGNGVTAFVTITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SI+KE ELW+ G KE+TLLGQNV+SY G K + F+
Sbjct: 193 GRERSRDPHSIIKECQELWENGYKEITLLGQNVDSYLWYGGGPK-----------KDFDK 241
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + F+ LL+ ++ PEMR R+++ +P+D E+ M PN+C+Y+HLP
Sbjct: 242 ATEMQKATAIDFSQLLEMVAKAVPEMRIRFSTSNPQDMSLEVFRKMAQYPNICRYVHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
QTG++ +LE M R +TRE YL+L+++ R+I+PDV S D I GFC ETEE+H DTL+LMK
Sbjct: 302 QTGSNKMLELMNRQHTREEYLELIKEARKIVPDVAFSQDMIVGFCNETEEDHQDTLSLMK 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YMFAYS R T AH+ D+VP EVK+RRL E+I+ E + + S VG
Sbjct: 362 EVEYDYGYMFAYSERPGTPAHKKMEDNVPAEVKKRRLQEVIDLQGELSRKRMKSYVGRHH 421
Query: 497 LVLVEGPNKK 506
+L+EG +KK
Sbjct: 422 EILIEGESKK 431
>gi|255530165|ref|YP_003090537.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pedobacter
heparinus DSM 2366]
gi|255343149|gb|ACU02475.1| RNA modification enzyme, MiaB family [Pedobacter heparinus DSM
2366]
Length = 485
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/468 (48%), Positives = 304/468 (64%), Gaps = 31/468 (6%)
Query: 58 DLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEV 117
D A E V + ++Y E+YGCQMN D EIV SI+ + G+ + E A+V
Sbjct: 12 DEARQGEALVTAAPLVRNGRKLYIESYGCQMNFADSEIVASILLDQGFETTGDYKE-ADV 70
Query: 118 IFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKD 176
+FINTC+IR+ AE +V RL+ F G + ++P IV VLGCMAERLK
Sbjct: 71 VFINTCSIRENAEQRVRNRLSQF-------------GAEKRRNPKLIVGVLGCMAERLKS 117
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTA 236
K L+ +K+VDVV GPDAYR+LP+LL EV+ G K IN LLS EETYADISPVR++ N +TA
Sbjct: 118 KFLEEEKLVDVVVGPDAYRELPQLLNEVESGHKAINVLLSREETYADISPVRLNGNGITA 177
Query: 237 FVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDT 296
F+S+MRGC+NMCSFC+VPFTRGRERSR SI+ E +L+ G KEVTLLGQNV+SY
Sbjct: 178 FISIMRGCDNMCSFCVVPFTRGRERSRDPHSILAEAQDLFDRGYKEVTLLGQNVDSY--- 234
Query: 297 SGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPD 356
W+ + + +++ + FA LL++++L PE+R R+++ HPKD D
Sbjct: 235 -----------KWK-GAATDENREAQEIEVNFAQLLEKVALISPELRVRFSTSHPKDITD 282
Query: 357 ELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDF 416
E+LY + N+C YIHLP Q+G++ VLE M R YTRE Y++ + IRQIIPD +SSD
Sbjct: 283 EVLYTIAKYENICNYIHLPVQSGSTRVLELMNRTYTREWYINRIDAIRQIIPDCAISSDI 342
Query: 417 ICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
I GFC ETEEEH +TL++M VGYD A+ F+YS R T A R DDVPEEVK+RRL E+
Sbjct: 343 IAGFCTETEEEHQETLSIMDYVGYDFAFTFSYSERPGTLAARKLEDDVPEEVKKRRLAEI 402
Query: 477 IEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +E++ VG +LVEG +KK+ D + G++D+ V F
Sbjct: 403 LAKQQETSLFRLQQFVGKTVKILVEGTSKKS-DRDFCGRNDQNAMVVF 449
>gi|340617148|ref|YP_004735601.1| MiaB-like tRNA modifying protein [Zobellia galactanivorans]
gi|339731945|emb|CAZ95213.1| MiaB-like tRNA modifying protein [Zobellia galactanivorans]
Length = 481
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/448 (45%), Positives = 303/448 (67%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ N G++ N+ E A+++ +NTC+IR+ AE V +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILANEGFNTTQNLKE-ADLVLVNTCSIREKAELTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F +K++ + K+ VLGCMAERLK + L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKFNAIKKD------------RPHMKVGVLGCMAERLKHQFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L++E+D G+ +N +LS +ETY D++PVR++ N VTAFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLIQEIDEGRSAVNVILSKDETYGDVAPVRLNTNGVTAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI+ EV++LW +G KE+TLLGQNV+SY G++K+ E ++ +
Sbjct: 192 GRERSRDPQSIIDEVNDLWSKGFKEITLLGQNVDSYLWYGGGLKKDFEKASDMQ------ 245
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K + F+ LL+R++L P+MR R+++ +P+D ++++ M N+C YIHLP
Sbjct: 246 -----KATAVDFSQLLERVALAQPKMRIRFSTSNPQDMTLDVIHTMAKYDNICNYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y +L+ IR+IIPD +S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSNRILKAMNRLHTREEYFELIDNIRKIIPDCAISQDMITGFPTETEEDHKDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPEE+K+RRL+E+I R+ + + +G VQ
Sbjct: 361 YVKYDYGFMFAYSERPGTLAERKMEDDVPEEIKKRRLSEIIALQRQHCQERTEQHLGKVQ 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D +G++ + F
Sbjct: 421 EVLIEGTSKKS-DEHFMGRNSQNTVAVF 447
>gi|343085712|ref|YP_004775007.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Cyclobacterium
marinum DSM 745]
gi|342354246|gb|AEL26776.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Cyclobacterium marinum DSM 745]
Length = 486
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/449 (50%), Positives = 305/449 (67%), Gaps = 28/449 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R+Y E+YGCQMN +D EIV SIMK G+ + +NA+VIF+NTC+IRD AE V +RL
Sbjct: 34 RLYIESYGCQMNFSDSEIVASIMKETGFDTTSDY-KNADVIFLNTCSIRDKAEQTVRKRL 92
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ F +K +P KI VLGCMAERLK+K+L+ +K+VD+V GPDAYRD
Sbjct: 93 SQFNQIK-------------GANPELKIGVLGCMAERLKEKLLEEEKLVDMVVGPDAYRD 139
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+ +V+ GQKGINT LS EETYADISPVR++ N V+AF+S+MRGC+NMCSFC+VPFT
Sbjct: 140 LPNLVGQVEEGQKGINTFLSREETYADISPVRLNSNGVSAFISIMRGCDNMCSFCVVPFT 199
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SI KE EL+ G KEVTLLGQNV+SY + + RL++
Sbjct: 200 RGRERSRDPYSITKEAQELFDNGYKEVTLLGQNVDSYKWSP------QENNKARLNKKEA 253
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ +V + F+DLL+ ++ P++R R+++ HPKD DE+LY M+ N+CKYIHLP
Sbjct: 254 EITEV----VHFSDLLEMVAKVNPKLRVRFSTSHPKDITDEVLYTMKRYDNICKYIHLPV 309
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+GNS +LE M R Y R+ YL+ V+KIR+I+ D G+SSD I GFC ETEEEH DTL++M
Sbjct: 310 QSGNSRILELMNRTYDRDWYLNRVEKIREILGEDCGISSDMIAGFCSETEEEHQDTLSIM 369
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
V YD +YMF YS R T A + Y DD+P VK+RRL E+I+ + + ++G +
Sbjct: 370 DIVQYDFSYMFYYSERPGTLAAKKYPDDIPLTVKKRRLQEIIDKQSSLSMVRHKREIGQI 429
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEG +K++ TE + + ++V
Sbjct: 430 QEVLVEGISKRS--TEQLKAKNSANKVVI 456
>gi|313206813|ref|YP_004045990.1| tRNA-i(6)a37 thiotransferase enzyme miab [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|383486121|ref|YP_005395033.1| tRNA-i(6)a37 thiotransferase enzyme miab [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|386321204|ref|YP_006017366.1| 2-methylthioadenine synthetase [Riemerella anatipestifer RA-GD]
gi|416109393|ref|ZP_11591352.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Riemerella
anatipestifer RA-YM]
gi|442313971|ref|YP_007355274.1| 2-methylthioadenine synthetase [Riemerella anatipestifer RA-CH-2]
gi|312446129|gb|ADQ82484.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|315023886|gb|EFT36888.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Riemerella
anatipestifer RA-YM]
gi|325335747|gb|ADZ12021.1| 2-methylthioadenine synthetase [Riemerella anatipestifer RA-GD]
gi|380460806|gb|AFD56490.1| tRNA-i(6)a37 thiotransferase enzyme miab [Riemerella anatipestifer
ATCC 11845 = DSM 15868]
gi|441482894|gb|AGC39580.1| 2-methylthioadenine synthetase [Riemerella anatipestifer RA-CH-2]
Length = 477
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/430 (49%), Positives = 290/430 (67%), Gaps = 25/430 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ + GY+ + V E A++I +NTC+IR+ AE V RL
Sbjct: 26 KLFLESYGCQMNFSDSEIVASILNDEGYNTTLKV-EEADLILLNTCSIREKAEQTVRMRL 84
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ F LK+E K ++ G VLGCMAERLK K L+ +++VD+V GPDAYRDL
Sbjct: 85 SQFKNLKKE-KPSLTVG-----------VLGCMAERLKTKFLEEEQLVDLVVGPDAYRDL 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL+E + G+ IN +LS EETYADI+PVR+ N VTAFV++ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLLKETEDGRDAINVILSKEETYADINPVRLGGNGVTAFVTITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SI+KE ELW+ G KE+TLLGQNV+SY G K + F+
Sbjct: 193 GRERSRDPHSIIKECQELWENGYKEITLLGQNVDSYLWYGGGPK-----------KDFDK 241
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + F+ LL+ ++ PEMR R+++ +P+D E+ M PN+CKY+HLP
Sbjct: 242 ATEMQKATAVDFSQLLEMVAKAVPEMRIRFSTSNPQDMSLEVFRKMAQYPNICKYVHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
QTG++ +LE M R +TRE YL+L+++ R+I+PDV S D I GFC ETEE+H DTL+LM+
Sbjct: 302 QTGSNKMLELMNRQHTREEYLELIREARKIVPDVAFSQDMIVGFCNETEEDHQDTLSLMR 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YMFAYS R T AH+ D+VP EVK+RRL E+I+ E + + VG
Sbjct: 362 EVEYDYGYMFAYSERPGTPAHKKMEDNVPAEVKKRRLQEVIDLQGELSRKRMKGYVGRHH 421
Query: 497 LVLVEGPNKK 506
+L+EG +KK
Sbjct: 422 EILIEGESKK 431
>gi|149277185|ref|ZP_01883327.1| 2-methylthioadenine synthetase [Pedobacter sp. BAL39]
gi|149232062|gb|EDM37439.1| 2-methylthioadenine synthetase [Pedobacter sp. BAL39]
Length = 482
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/454 (50%), Positives = 303/454 (66%), Gaps = 34/454 (7%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
E+ + ++Y E+YGCQMN D EIV SI+K+ G+ + E A+V+FINTC+IR+ AE
Sbjct: 26 EIRNGRKLYIESYGCQMNFADSEIVASILKDQGFETTGDYKE-ADVVFINTCSIRENAEQ 84
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCG 190
+V RL+ F KR K+P +V VLGCMAERLK K L+ +K+VDVV G
Sbjct: 85 RVRNRLSQFSAEKR-------------KNPKLVVGVLGCMAERLKSKFLEEEKLVDVVVG 131
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
PDAYRDLP+L+ +V+ G K IN LLS EETYADISPVR++ N +TAF+S+MRGC+NMCSF
Sbjct: 132 PDAYRDLPQLIGQVEEGHKAINVLLSREETYADISPVRLNGNGITAFISIMRGCDNMCSF 191
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
C+VPFTRGRERSR SI+ E +L +G KEVTLLGQNV+SY + E GA
Sbjct: 192 CVVPFTRGRERSRDPHSILAEAQDLVDKGYKEVTLLGQNVDSYKWKGA---DAEEGA--- 245
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
++ + FA LL++++L PE+R R+++ HPKD DE+LY + N+C
Sbjct: 246 ------------EIEVNFAQLLEKVALLSPELRVRFSTSHPKDITDEVLYTIAKYDNICN 293
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
YIHLP Q+G+S VLE M R YTRE Y++ V IR+IIP +SSD I GFC ETEEEH +
Sbjct: 294 YIHLPVQSGSSRVLELMNRTYTREWYINRVDAIRRIIPGCAISSDIIAGFCTETEEEHQE 353
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL++M VGYD A+ F+YS R T A R DD+PE VK+RRL E++ +E++
Sbjct: 354 TLSMMDYVGYDFAFTFSYSERPGTLAARKLEDDIPEPVKKRRLAEILLKQQETSLYRLQQ 413
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VGT+Q +LVEG +KK+ D + G++D+ V F
Sbjct: 414 FVGTMQRILVEGTSKKS-DKDFCGRNDQNAMVVF 446
>gi|404405626|ref|ZP_10997210.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alistipes sp.
JC136]
Length = 454
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/449 (48%), Positives = 294/449 (65%), Gaps = 46/449 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R++ ETYGCQMNV+D E V+SIM+ AGY + E A+VI INTC+IRD AE ++W RL
Sbjct: 17 RLFVETYGCQMNVSDTETVVSIMQRAGYVYTERIGE-ADVILINTCSIRDNAEQRIWGRL 75
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+RE P +V ++GCMAERL++K+++ VDVV GPDAYRD
Sbjct: 76 AEMKRYRRE-------------RPGLVVGIIGCMAERLREKLVEGPHGVDVVAGPDAYRD 122
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LPRL+ E + G KG+N LLS EETYA+I+PVR+ +N V+AFV++MRGCNN CS+C+VP+T
Sbjct: 123 LPRLVREAEAGGKGVNVLLSTEETYAEIAPVRLDRNGVSAFVAIMRGCNNFCSYCVVPYT 182
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR E+IV EV L++ G +EVTLLGQNVNSY +G E G
Sbjct: 183 RGRERSRDAETIVAEVRSLFENGYREVTLLGQNVNSY--CAG-----ETG---------- 225
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
F +L+ R++ P +R R+ + HPKD D LL +M PN+C+ IHLPA
Sbjct: 226 -----------FPELIRRVAEVSPLLRVRFATSHPKDMSDRLLEVMAAMPNICRSIHLPA 274
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++A+LERM R YTRE YLD + IR+ +PD +++D I GF GETEEEHA+TL+LM+
Sbjct: 275 QSGSTAMLERMNRKYTREWYLDRIAAIRRYLPDCAITTDLIAGFSGETEEEHAETLSLMR 334
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD-SQVGTV 495
VGY+ AYMF YS R T A ++ DDVP+EVK RRL E+I A + G + VG
Sbjct: 335 EVGYEFAYMFKYSERPGTFAEKHLPDDVPDEVKSRRLQEII-ALQNELGHASNLRDVGRE 393
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K+ + +L G++ + V F
Sbjct: 394 FEVLVEGESKRDRN-QLSGRTSQNKVVVF 421
>gi|406672623|ref|ZP_11079848.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bergeyella zoohelcum CCUG
30536]
gi|405587167|gb|EKB60895.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bergeyella zoohelcum CCUG
30536]
Length = 480
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 285/430 (66%), Gaps = 25/430 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ GY+ + V E A++I +NTC+IR+ AE V RL
Sbjct: 26 KLFLESYGCQMNFSDSEIVASILNEQGYNTTLKV-EEADLILLNTCSIREKAEQTVRNRL 84
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ F LK+ SK + VLGCMAERLK K L+ + +VD+V GPDAYRDL
Sbjct: 85 SSFHHLKK------------SKPHLTVGVLGCMAERLKTKFLEEEHLVDLVVGPDAYRDL 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL+E + G+ IN +LS EETYADI+PVR+ N VTAFV++ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLLKETEGGRDAINVILSKEETYADINPVRLGGNGVTAFVTITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SI+ E ELW+ G KE+TLLGQNV+SY G K + F
Sbjct: 193 GRERSRDPHSIINECKELWENGYKEITLLGQNVDSYLWYGGGPK-----------KDFAK 241
Query: 318 MCKVKKM-GLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K+ + FA LL+ ++ PEMR R+ + +P+D ++ +M PN+C+Y+HLP
Sbjct: 242 ATEMQKLTAVHFAQLLEMVAKAVPEMRIRFATSNPQDMSLDVFRMMAKYPNICRYVHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TR+ YLDL+++ + I+PD+ S D I GFCGETEE+H DTL+LM+
Sbjct: 302 QSGSDNMLKAMNRQHTRQEYLDLIKEAKNIVPDIAFSQDMIVGFCGETEEDHQDTLSLMR 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YMFAYS R T AH+ DD+P +VKQRRL+E+I E + + S VG
Sbjct: 362 EVEYDYGYMFAYSERPGTPAHKKMEDDIPADVKQRRLSEVIALQGELSRKRMASYVGKTH 421
Query: 497 LVLVEGPNKK 506
+L+EG +KK
Sbjct: 422 EILIEGTSKK 431
>gi|383451510|ref|YP_005358231.1| TRNA-i(6)A37 modification enzyme MiaB [Flavobacterium indicum
GPTSA100-9]
gi|380503132|emb|CCG54174.1| Probable TRNA-i(6)A37 modification enzyme MiaB [Flavobacterium
indicum GPTSA100-9]
Length = 483
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/435 (48%), Positives = 292/435 (67%), Gaps = 27/435 (6%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
+Q +++ E+YGCQMN +D EIV SI+ GY+ N+ E A+++ +NTC+IRD AE V
Sbjct: 23 NQKKLFIESYGCQMNFSDSEIVASILSEQGYNTTQNL-EEADLVLVNTCSIRDKAEQTVR 81
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDA 193
+RL + +K+ +P K+ VLGCMAERLK+K LD +K+VD+V GPDA
Sbjct: 82 KRLQEYNAIKK-------------INPSMKVGVLGCMAERLKEKFLDEEKIVDMVVGPDA 128
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
Y+D+P LL+EV+ G+ IN +LS EETY DI PVR+S N V+AFVS+ RGC+NMC+FC+V
Sbjct: 129 YKDIPNLLKEVEEGRDAINVILSKEETYGDIQPVRLSSNGVSAFVSITRGCDNMCTFCVV 188
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLS 312
PFTRGRERSR ESI++E+ +LW +G KEVTLLGQNV+SY G++K+ E + +
Sbjct: 189 PFTRGRERSREPESIIQEIQDLWDKGFKEVTLLGQNVDSYLWYGGGLKKDFEKASEMQ-- 246
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
K + FA LLDR + FP+MRFR+++ +P+D E++ +M N+CKYI
Sbjct: 247 ---------KATAVDFAQLLDRCATTFPKMRFRFSTSNPQDMHLEVIEVMAKHHNICKYI 297
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G++ +L+ M R +TRE Y+ LV I +IIPD+ LS D I GF ETEE+H DTL
Sbjct: 298 HLPVQSGSTRILKEMNRQHTREEYMTLVDNIYRIIPDISLSQDMIAGFPTETEEDHQDTL 357
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+LM+ YD +MFAYS R T A R DDVPE VK+RRL E+I+ ++ + V
Sbjct: 358 SLMEHCKYDFGFMFAYSERPGTLAARKMEDDVPEAVKKRRLNEIIDLQQKMALERTKRFV 417
Query: 493 GTVQLVLVEGPNKKA 507
G V VLVE +K++
Sbjct: 418 GQVVEVLVEKDSKRS 432
>gi|313674871|ref|YP_004052867.1| tRNA-i(6)a37 thiotransferase enzyme miab [Marivirga tractuosa DSM
4126]
gi|312941569|gb|ADR20759.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marivirga tractuosa DSM
4126]
Length = 488
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/456 (48%), Positives = 301/456 (66%), Gaps = 40/456 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SIMK G+ + N NA+VIF+NTC+IR+ AE V +RL
Sbjct: 36 KLYIESYGCQMNFSDSEIVTSIMKENGF-DTTNDFNNADVIFLNTCSIREKAELTVRKRL 94
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
F + +++ P +I VLGCMAERLK K+L+ +K+VD+V GPD+YRD
Sbjct: 95 TDF-------------NKVKARKPEMQIGVLGCMAERLKTKLLEEEKIVDIVAGPDSYRD 141
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L++ VD G+K +NT LS EETYADISPVR++ N VTAF+S+MRGC+NMCSFC+VPFT
Sbjct: 142 LPNLVKTVDDGEKAVNTFLSREETYADISPVRLNSNGVTAFISIMRGCDNMCSFCVVPFT 201
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SIV+E +L+ +G +EVTLLGQNV+SY W SE N
Sbjct: 202 RGRERSRDPFSIVQEAQDLFDKGYREVTLLGQNVDSY--------------KW--SEEIN 245
Query: 317 SMCKV-------KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
+ ++ + + FA+L++ ++ P++R R+++ HPKD DE+L+ M+ N+C
Sbjct: 246 NKARLEKIEKKEEVEVINFANLIEMVANVSPDLRVRFSTSHPKDITDEVLHTMKKYENIC 305
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEEH 428
KYIHLPAQ+GNS +L+ M R Y R+ Y++ V IR I+ + G+SSD I GFC ETEEEH
Sbjct: 306 KYIHLPAQSGNSRILKMMNRTYDRDWYINRVDAIRNILGEECGISSDMIAGFCSETEEEH 365
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
DTLTLM V YD +YMF YS R T A + Y DD+P E K++RL E+I RE + +
Sbjct: 366 QDTLTLMDYVKYDFSYMFFYSERPGTLAEKRYEDDIPLETKKKRLQEIINKQREYSLERN 425
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ V VLVEG +K++ + +L G++ V F
Sbjct: 426 QLDLNKVHKVLVEGTSKRSEE-QLQGRNTANKVVIF 460
>gi|193214302|ref|YP_001995501.1| MiaB family RNA modification protein [Chloroherpeton thalassium
ATCC 35110]
gi|229890479|sp|B3QVA0.1|MIAB_CHLT3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|193087779|gb|ACF13054.1| RNA modification enzyme, MiaB family [Chloroherpeton thalassium
ATCC 35110]
Length = 451
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/453 (45%), Positives = 296/453 (65%), Gaps = 46/453 (10%)
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+ + R+Y ETYGCQMN +D EI+ SI+ +AGY+ + + A++IF+NTCA+R+ AE ++
Sbjct: 15 NQKARVYLETYGCQMNFSDTEIISSILSDAGYA-IAESEQVADIIFLNTCAVRENAEQRI 73
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVV--LGCMAERLKDKILDADKMVDVVCGP 191
RL LK K PK++V LGCMAERL++K+ +K+VD++ GP
Sbjct: 74 RNRLQNLRPLK--------------KQNPKLIVGVLGCMAERLREKLFQEEKIVDLIAGP 119
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
DAYR LP LL+ + G+K N +LSLEETYADI+P+R KN +AF+++MRGC+NMC+FC
Sbjct: 120 DAYRTLPNLLDLAESGEKAANVMLSLEETYADINPLR--KNGHSAFLAIMRGCDNMCAFC 177
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVP+TRGRERSRP+ SI+ E+ +L EG +EVTLLGQNVNSY D +
Sbjct: 178 IVPYTRGRERSRPMTSILDELKQLSDEGTREVTLLGQNVNSYYDENS------------- 224
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
G RFA+L+D+ SL P MR R+T+ HPKD EL+ ++ +R N+C++
Sbjct: 225 -------------GTRFANLMDKASLVNPNMRIRFTTSHPKDISSELIDVIAERKNLCEF 271
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLP Q+G+S +LE M RG+TRE YL+ + I+ IP+ +S+D I GFC ETE +HA T
Sbjct: 272 IHLPVQSGSSRMLELMNRGHTREDYLEKIALIKSKIPNCSISTDMISGFCTETEADHAAT 331
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L+L++ V YD A+ F YS+R T A DDVP++VKQRRL+E+I ++ + + Y +
Sbjct: 332 LSLLREVRYDYAFTFVYSVRPNTPAATRLNDDVPDDVKQRRLSEVIALQQKISAELYRND 391
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G VL+EG +K++ D +G++ V F
Sbjct: 392 IGNTHEVLIEGESKRSSDM-WMGRARNNRVVVF 423
>gi|423315890|ref|ZP_17293795.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bergeyella zoohelcum ATCC
43767]
gi|405585606|gb|EKB59430.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bergeyella zoohelcum ATCC
43767]
Length = 480
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 286/430 (66%), Gaps = 25/430 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ GY+ + V E A++I +NTC+IR+ AE V RL
Sbjct: 26 KLFLESYGCQMNFSDSEIVASILNEQGYNTTLKV-EEADLILLNTCSIREKAEQTVRNRL 84
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ F LK+ K N+ G VLGCMAERLK K L+ + +VD+V GPDAYRDL
Sbjct: 85 SSFHHLKKS-KPNLTVG-----------VLGCMAERLKTKFLEEEHLVDLVVGPDAYRDL 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL+E + G+ IN +LS +ETYADI+PVR+ N VTAFV++ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLLKETEGGRDAINVILSKDETYADINPVRLGGNGVTAFVTITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SI+ E ELW+ G KE+TLLGQNV+SY G K + F
Sbjct: 193 GRERSRDPHSIINECKELWENGYKEITLLGQNVDSYLWYGGGPK-----------KDFAK 241
Query: 318 MCKVKKM-GLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K+ + FA LL+ ++ PEMR R+ + +P+D ++ +M PN+C+Y+HLP
Sbjct: 242 ATEMQKLTAVHFAQLLEMVAKAVPEMRIRFATSNPQDMSLDVFRMMAKYPNICRYVHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TR+ YLDL+++ + I+PD+ S D I GFCGETEE+H DTL+LM+
Sbjct: 302 QSGSDNMLKAMNRQHTRQEYLDLIKEAKNIVPDIAFSQDMIVGFCGETEEDHQDTLSLMR 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YMFAYS R T AH+ DD+P +VKQRRL+E+I E + + S VG
Sbjct: 362 EVEYDYGYMFAYSERPGTPAHKKMEDDIPADVKQRRLSEVIALQGELSRKRMASYVGKTH 421
Query: 497 LVLVEGPNKK 506
+L+EG +KK
Sbjct: 422 EILIEGTSKK 431
>gi|399023460|ref|ZP_10725520.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Chryseobacterium sp. CF314]
gi|398082960|gb|EJL73696.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Chryseobacterium sp. CF314]
Length = 489
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/440 (47%), Positives = 290/440 (65%), Gaps = 25/440 (5%)
Query: 68 ATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRD 127
A + + +++ E+YGCQMN +D EIV SI+ GY+ + V E A++I +NTC+IR+
Sbjct: 23 AIAEKAGNSKKLFLESYGCQMNFSDSEIVASILNEQGYNTTLKVEE-ADLILLNTCSIRE 81
Query: 128 YAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDV 187
AE V RL+ F LK+E + N+ G VLGCMAERLK K L+ +++VD+
Sbjct: 82 KAEQTVRMRLSQFKNLKKE-RPNMTVG-----------VLGCMAERLKTKFLEEEQLVDL 129
Query: 188 VCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 247
V GPDAYRDLP LL+E + G+ IN +LS EETYADI+PVR+ N VTAFV++ RGC+NM
Sbjct: 130 VVGPDAYRDLPNLLKETEDGRDAINVILSKEETYADINPVRLGGNGVTAFVTITRGCDNM 189
Query: 248 CSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGA 307
C+FC+VPFTRGRERSR SI++E +LW G KE+TLLGQNV+SY G K
Sbjct: 190 CTFCVVPFTRGRERSRDPHSILEECKDLWNSGYKEITLLGQNVDSYLWYGGGPK------ 243
Query: 308 NWRLSEGFNSMCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRP 366
+ F +++K + F+ LLD+++ PEMR R+++ +P+D ++ M
Sbjct: 244 -----KDFTKASEMQKATAVDFSQLLDQVAKAVPEMRIRFSTSNPQDMSLDVFRTMAKHD 298
Query: 367 NVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEE 426
N+CKY+HLP Q+G++ +L+ M R +TRE YLDL++K ++I+P++ S D I GFC ETEE
Sbjct: 299 NICKYVHLPVQSGSNNMLQAMNRQHTREEYLDLIKKAKEIVPEIAFSQDMIVGFCNETEE 358
Query: 427 EHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQ 486
+H DTL+LMK V YD YMFAYS R T AH+ D++P +VKQRRL E+I E +
Sbjct: 359 DHQDTLSLMKEVEYDYGYMFAYSERPGTPAHKKMEDNIPADVKQRRLAEVIALQGELSRN 418
Query: 487 CYDSQVGTVQLVLVEGPNKK 506
S VG + VL+EG +KK
Sbjct: 419 RMKSYVGRIHQVLIEGISKK 438
>gi|255534247|ref|YP_003094618.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Flavobacteriaceae bacterium 3519-10]
gi|255340443|gb|ACU06556.1| tRNA-i(6)A37 methylthiotransferase [Flavobacteriaceae bacterium
3519-10]
Length = 508
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/440 (47%), Positives = 290/440 (65%), Gaps = 25/440 (5%)
Query: 68 ATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRD 127
A + + +++ E+YGCQMN +D EIV SI+ GY+ +N E A++I +NTC+IR+
Sbjct: 39 AIAEKPQNSKKLFLESYGCQMNFSDSEIVASILSKQGYNTTLN-HEEADLILLNTCSIRE 97
Query: 128 YAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDV 187
AE V RL+ F LK+E + N+ G VLGCMAERLK K L+ +++VD+
Sbjct: 98 KAEQTVRMRLSQFKNLKKE-RPNLTVG-----------VLGCMAERLKTKFLEEEQLVDL 145
Query: 188 VCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 247
V GPDAYRDLP LL+E D G+ IN +LS +ETYADI+PVR+ N VTAFV++ RGC+NM
Sbjct: 146 VVGPDAYRDLPNLLKETDSGRDAINVILSKDETYADINPVRLGGNGVTAFVTITRGCDNM 205
Query: 248 CSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGA 307
C+FC+VPFTRGRERSR SIV+E LW+ G KE+TLLGQNV+SY G K
Sbjct: 206 CTFCVVPFTRGRERSRDPHSIVEECKTLWENGYKEITLLGQNVDSYLWYGGGAK------ 259
Query: 308 NWRLSEGFNSMCKVKKM-GLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRP 366
+ F + +++++ +RFA LL+ +++ PEMR R+++ +P D ++ +M
Sbjct: 260 -----KDFKNASEMQQLTAIRFAQLLEMVAVAVPEMRIRFSTSNPHDMTVDVFEVMAKHD 314
Query: 367 NVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEE 426
N+CKY+HLP Q+G+ +LE+M R +TR YL+L+ + ++I+P++ S D I GFCGETEE
Sbjct: 315 NICKYVHLPVQSGSDRILEKMNRQHTRAEYLNLINRAKEIVPEISFSQDMIIGFCGETEE 374
Query: 427 EHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQ 486
+H TL+LM+ V YD YMFAYS R T AHR DDVP +VKQRRL E+I E + +
Sbjct: 375 DHQLTLSLMREVEYDYGYMFAYSERPGTPAHRKMEDDVPADVKQRRLAEVIALQGELSRK 434
Query: 487 CYDSQVGTVQLVLVEGPNKK 506
G + VL+EG +KK
Sbjct: 435 RMQGYAGRMHEVLIEGTSKK 454
>gi|399925429|ref|ZP_10782787.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Myroides
injenensis M09-0166]
Length = 482
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/455 (46%), Positives = 305/455 (67%), Gaps = 28/455 (6%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+V + +++ E+YGCQMN +D EIV SI+ +AGY+ N+ E A+++ +NTC+IRD AE
Sbjct: 19 KVTNTKKLFIESYGCQMNFSDSEIVASILSDAGYNTTTNL-EEADLVLVNTCSIRDKAEQ 77
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCG 190
V +RL+ + +K+ K+P K+ VLGCMAERLK K L+ +K+VD+V G
Sbjct: 78 TVRKRLDQYNQVKK-------------KNPGMKVGVLGCMAERLKSKFLEEEKIVDMVVG 124
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
PDAY+DLP LL++V+ G+ IN +LS +ETY DISPVR+ N VTAFVS+ RGC+NMC+F
Sbjct: 125 PDAYKDLPNLLKDVEEGRDAINVILSKDETYGDISPVRLQSNGVTAFVSITRGCDNMCTF 184
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
C+VPFTRGRERSR +SI++E+ +L + G KE+TLLGQNV+SY G
Sbjct: 185 CVVPFTRGRERSRDPQSIIEEIKDLNERGFKEITLLGQNVDSYLWYGG-----------G 233
Query: 311 LSEGFNSMCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
L + F+ +++K + FA LLD+ + FP+MRFR+++ +P+D E++ ++ N+C
Sbjct: 234 LKKDFDKATEMQKATAIDFAQLLDQCATAFPKMRFRFSTSNPQDMHIEVIEVIAKHHNIC 293
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
KYIHLP Q+G++ +LE M R +TRE Y+ LV KI ++IPD+ LS D I GF ETEE+H
Sbjct: 294 KYIHLPVQSGSTRILEEMNRQHTREEYIALVDKIYELIPDISLSQDMITGFPTETEEDHK 353
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
DTL+LM+ V YD +MFAYS R T A R DDVPEEVK+RRL+E+I + + +
Sbjct: 354 DTLSLMEHVRYDFGFMFAYSERPGTLAARKLEDDVPEEVKKRRLSEIIFTQNKISLERTQ 413
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VG VL+E +K++ D E G++ + V F
Sbjct: 414 RFVGQTVEVLIEKTSKRS-DKEWSGRNSQNTTVVF 447
>gi|374598833|ref|ZP_09671835.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Myroides odoratus DSM
2801]
gi|423322975|ref|ZP_17300817.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Myroides
odoratimimus CIP 103059]
gi|373910303|gb|EHQ42152.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Myroides odoratus DSM
2801]
gi|404609996|gb|EKB09354.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Myroides
odoratimimus CIP 103059]
Length = 483
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/449 (46%), Positives = 301/449 (67%), Gaps = 28/449 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ +AGY+ N+ E A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLFIESYGCQMNFSDSEIVASILSDAGYNTTNNL-EEADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ + R + K+P K+ VLGCMAERLK K L+ +K+VD+V GPDAY+D
Sbjct: 84 DQY-------------NRVKKKNPGMKVGVLGCMAERLKSKFLEEEKIVDMVVGPDAYKD 130
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP LL+EVD G+ IN +LS +ETY DI+PVR+ N VTAFVS+ RGC+NMC+FC+VPFT
Sbjct: 131 LPNLLKEVDEGRDAINVILSKDETYGDIAPVRLQSNGVTAFVSITRGCDNMCTFCVVPFT 190
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGF 315
RGRERSR SI+ E+ +L++ G KE+TLLGQNV+SY G++K+ + + +
Sbjct: 191 RGRERSREPHSIISEIQDLYERGFKEITLLGQNVDSYLWYGGGLKKDYDKASEIQ----- 245
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K + FA LLD + +FP+MRFR+++ +P+D E++ ++ + N+CKYIHLP
Sbjct: 246 ------KATAVDFAQLLDLCATKFPKMRFRFSTSNPQDMHMEVIEVIANHDNICKYIHLP 299
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L+ M R +TRE Y++LV KI +IPD+ LS D I GF ETEE+H DTL+LM
Sbjct: 300 VQSGSTRILQEMNRQHTREEYIELVDKIYALIPDISLSQDMITGFPTETEEDHQDTLSLM 359
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V YD +MFAYS R T A R DD+PEEVK+RRL+E+I + + + VG
Sbjct: 360 EHVRYDFGFMFAYSERPGTLAARKLEDDIPEEVKKRRLSEIIAVQGKISLERTKRFVGQT 419
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +K++ D E G++ + V F
Sbjct: 420 VEVLIEKTSKRS-DLEWSGRNSQNTTVVF 447
>gi|390947823|ref|YP_006411583.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Alistipes finegoldii DSM 17242]
gi|390424392|gb|AFL78898.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Alistipes finegoldii DSM 17242]
Length = 462
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/448 (48%), Positives = 289/448 (64%), Gaps = 44/448 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D EIV+S+M+ GY + E A+VI INTC+IRD AE ++W RL
Sbjct: 27 KLFVETYGCQMNVGDTEIVVSVMQREGYVYTERIDE-ADVILINTCSIRDNAEQRIWGRL 85
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+KR + N P +V V+GCMAERLK+K+++ VDVV GPDAYRD
Sbjct: 86 AE---MKRYRRAN----------PGLVVGVIGCMAERLKEKLVEGPHGVDVVAGPDAYRD 132
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LPRL+ E + G KG+N LLS EETYA+I+PVR+ +N V+AFV++MRGCNN CS+C+VP+T
Sbjct: 133 LPRLVREAEAGGKGVNVLLSTEETYAEIAPVRLDRNGVSAFVAIMRGCNNFCSYCVVPYT 192
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR E+I+ EV L+ G +EVTLLGQNVNSY R E
Sbjct: 193 RGRERSRDPETILAEVRTLFGNGYREVTLLGQNVNSY----------------RFGE--- 233
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ F L+ R++ P +R R+ + HPKD D LL +M + PN+C+ IHLPA
Sbjct: 234 ---------VDFPGLMRRVASISPLLRVRFATSHPKDISDRLLEVMAEMPNICRAIHLPA 284
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G S++L RM R YTRE YLD V IR+ +PD +++D I GF GETEEEHA TL+LM+
Sbjct: 285 QSGASSMLARMNRKYTREWYLDRVAAIRRYLPDCAVTTDLIAGFSGETEEEHAATLSLMR 344
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGY+ AYMF YS R T+AH++ DDVPEEVK RL E+I E + VG
Sbjct: 345 EVGYEFAYMFKYSERPGTYAHKHLPDDVPEEVKSARLAEIIALQNELSRASNLRDVGREF 404
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K+ + +L G++ + V F
Sbjct: 405 EVLVEGTSKR-DENQLSGRTSQNKVVVF 431
>gi|228471870|ref|ZP_04056641.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga gingivalis
ATCC 33624]
gi|228276800|gb|EEK15503.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga gingivalis
ATCC 33624]
Length = 481
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/450 (46%), Positives = 299/450 (66%), Gaps = 30/450 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ G++ + E A+++ INTC++R+ AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILHKVGFNTTEELHE-ADLVLINTCSVREKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP--KIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
F +KR H P K+ VLGCMAERLK + L+ + +VD+V GPDAY+
Sbjct: 84 EQFNAVKR--------------HKPAMKVGVLGCMAERLKHQFLEEEHIVDLVVGPDAYK 129
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLP LL+EVD G+ +N LLS +ETYADISP+R++ N VTAFVS+ RGC+NMC+FCIVPF
Sbjct: 130 DLPNLLQEVDNGRDAVNVLLSRDETYADISPIRLNSNGVTAFVSITRGCDNMCTFCIVPF 189
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEG 314
TRGRERSR SI+ E++ELW G +EVTLLGQNV+SY G++K+ E ++ +
Sbjct: 190 TRGRERSRDPHSIIHEIEELWARGFREVTLLGQNVDSYLWYGGGLKKDFEKASDIQ---- 245
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
K + FA LLD ++ +FP+MR R+++ +P+D +++ M N+CKYIHL
Sbjct: 246 -------KVTAVNFAKLLDMVATQFPKMRIRFSTSNPQDMTLDVIDTMAKHHNICKYIHL 298
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R +TRE Y L+ IR+ IP+ +S D I GF ETEE+H DTL+L
Sbjct: 299 PVQSGSNRILKAMNRLHTREEYFALIDGIRERIPECAISQDMITGFPTETEEDHQDTLSL 358
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
M+ V YD +MFAYS R T A R DDVP+EVK+RRLTE+I+ ++ + +QVG
Sbjct: 359 MEYVKYDFGFMFAYSERPGTLAARKIADDVPDEVKKRRLTEIIDLQQKHSLLRTQAQVGK 418
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D E +G++ + V F
Sbjct: 419 TVEVLIEGNSKKS-DQEWMGRNTQNTVVVF 447
>gi|323449468|gb|EGB05356.1| hypothetical protein AURANDRAFT_31065 [Aureococcus anophagefferens]
Length = 540
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/463 (47%), Positives = 293/463 (63%), Gaps = 34/463 (7%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+ ET GCQMNV+D E+V S++ + GY E + A+V+ +NTCAIRD AE KVW RL
Sbjct: 39 FFIETRGCQMNVSDSEVVRSLLLDGGYGEATSAAA-ADVVLLNTCAIRDKAEAKVWTRL- 96
Query: 139 YFWFLKREWKKNVATGRSQSKHP-PK--IVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
R+ + G + H P+ + VLGCMAER+++ + + + + DVV GPDAYR
Sbjct: 97 ------RDLRGRAPHGVKLAAHRRPRQTVAVLGCMAERVEEGLFE-NGLADVVVGPDAYR 149
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKN-SVTAFVSVMRGCNNMCSFCIVP 254
+LPRLL V G + ++T LSL E Y ++ P R AFVSV RGCNN C++CIVP
Sbjct: 150 ELPRLLGNVGSGPQ-MDTKLSLVEDYGEVFPTRADPTMRHGAFVSVQRGCNNACAYCIVP 208
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL--- 311
+TRGRERSR V +++ EV L+ GV+E+TLLGQNVNSY+D + + W L
Sbjct: 209 YTRGRERSRAVTTVLDEVAALYDAGVREITLLGQNVNSYHDA-------KTASAWGLPRE 261
Query: 312 -SEGFNSMCKVKKM-----GLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
S+GF K K G+RFA+LL ++ P+ R R+TSPHPKDFPD LL + D
Sbjct: 262 YSDGFVPFVKSAKRDGMADGVRFAELLVAVAEAAPDARIRFTSPHPKDFPDALLRAVADT 321
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETE 425
PNV K +HLPAQ+G+ AVL MRRGYT +AY LV + RQ IP V LSSDFI GFCGE+E
Sbjct: 322 PNVAKQLHLPAQSGSDAVLRSMRRGYTDDAYRALVDRARQTIPGVALSSDFIAGFCGESE 381
Query: 426 EEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG 485
+H T+ L++ + YDMA++FAYS R+RT A R DDVP +VK RRL E+I AFR
Sbjct: 382 ADHDATVALIEDIRYDMAFLFAYSSRDRTPAQRRLDDDVPADVKNRRLNEIIAAFRAGRD 441
Query: 486 QCYDSQVGTVQLVLVEGPNKKAP----DTELVGKSDRGHRVAF 524
+ VG LVLVEG K+AP T + G++D ++ F
Sbjct: 442 ELSHEAVGETHLVLVEGAPKRAPAGADGTFVTGRNDGYRKIVF 484
>gi|423132235|ref|ZP_17119885.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Myroides
odoratimimus CCUG 12901]
gi|371639734|gb|EHO05347.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Myroides
odoratimimus CCUG 12901]
Length = 482
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/449 (47%), Positives = 300/449 (66%), Gaps = 28/449 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ N GY+ N+ E A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLFIESYGCQMNFSDSEIVASILSNEGYNTTDNL-EEADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ + +KR K+P K+ VLGCMAERLK K L+ +K+VD+V GPDAY+D
Sbjct: 84 DQYNQVKR-------------KNPGMKVGVLGCMAERLKAKFLEEEKIVDMVVGPDAYKD 130
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP LL++V+ G+ IN +LS +ETY DISPVR+ N VTAFVS+ RGC+NMC+FC+VPFT
Sbjct: 131 LPNLLKDVEEGRDAINVILSKDETYGDISPVRLQSNGVTAFVSITRGCDNMCTFCVVPFT 190
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGF 315
RGRERSR +SI++E+ +L + G KE+TLLGQNV+SY G++K+ E ++ +
Sbjct: 191 RGRERSRDPQSIIEEITDLQERGFKEITLLGQNVDSYLWYGGGLKKDFEKASDMQ----- 245
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K + FA LLD+ + FP+MRFR+++ +P+D E++ + N+CKYIHLP
Sbjct: 246 ------KATAVDFAQLLDQCATTFPKMRFRFSTSNPQDMHIEVIESIARHENICKYIHLP 299
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L+ M R +TRE Y++LV KI +IPD+ LS D I GF ETEE+H DTL+LM
Sbjct: 300 VQSGSTRILQEMNRQHTREEYIELVDKIYALIPDISLSQDMITGFPTETEEDHQDTLSLM 359
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V YD +MFAYS R T A R DDVPEEVK+RRLTE+I + + + VG
Sbjct: 360 EHVRYDFGFMFAYSERPGTLAARKLEDDVPEEVKKRRLTEIIAVQNKISLERTKRFVGQT 419
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +K+ D E G++ + V F
Sbjct: 420 VEVLIEKTSKRNED-EWSGRNSQNTTVVF 447
>gi|225010050|ref|ZP_03700522.1| RNA modification enzyme, MiaB family [Flavobacteria bacterium
MS024-3C]
gi|225005529|gb|EEG43479.1| RNA modification enzyme, MiaB family [Flavobacteria bacterium
MS024-3C]
Length = 482
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/462 (44%), Positives = 302/462 (65%), Gaps = 30/462 (6%)
Query: 68 ATGSEVHSQG----RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTC 123
T +++ QG ++Y E+YGC MN +D E+V SI+ GY V E A+++ INTC
Sbjct: 11 GTALKLNLQGSNAKKLYIESYGCAMNFSDSEVVASILAAEGY-HTTEVLEEADLVLINTC 69
Query: 124 AIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK 183
+IRD AE V +RL F +KR S K+ VLGCMAERLK K+L+ K
Sbjct: 70 SIRDKAEQTVRKRLEKFQAVKR------------SNPQMKVGVLGCMAERLKTKLLEEAK 117
Query: 184 MVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRG 243
+VD+V GPDAY+D+P LL+EV+ G+ +N +LS EETY DI+PVR++ N +TAFVS+ RG
Sbjct: 118 IVDMVVGPDAYKDIPNLLKEVEAGRNAVNVILSKEETYGDIAPVRLASNKITAFVSITRG 177
Query: 244 CNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV 303
C+NMC+FC+VPFTRGRERSR SI+ E+ +LW +G KE+TLLGQNV+SY G
Sbjct: 178 CDNMCTFCVVPFTRGRERSRDPLSILTEIQDLWDKGYKEMTLLGQNVDSYLWYGG----- 232
Query: 304 EPGANWRLSEGFNSMCKV-KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIM 362
L + FN ++ + + F+ LL++++L+FPEMR R+++ +P+D +++ M
Sbjct: 233 ------GLKKDFNKATQMAQATAVNFSQLLEKVALKFPEMRIRFSTSNPQDMTLDVVRTM 286
Query: 363 RDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCG 422
N+CK+IHLP Q+G++ +L+ M R +TRE Y+ L+ IR IIPD +S D I GF
Sbjct: 287 AAHSNICKHIHLPVQSGSNRILKAMNRQHTREEYMALIDNIRAIIPDCAISQDMIIGFPN 346
Query: 423 ETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRE 482
ETEE+H DTL+LM+ V YD YM++YS R T A +N D++PE +K +RL E+I R+
Sbjct: 347 ETEEDHKDTLSLMEYVKYDFGYMYSYSDRPGTAAGKNLADNIPETLKSKRLAEVIAVQRK 406
Query: 483 STGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++VG ++ VLVEG +KK+ + +L+G+++ V F
Sbjct: 407 HAAMHTQNRVGKIETVLVEGVSKKS-EKDLMGRNNYNAVVVF 447
>gi|332879166|ref|ZP_08446867.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332682966|gb|EGJ55862.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 482
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/448 (47%), Positives = 295/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ GY+ +V ++A+++ INTC++RD AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILSKVGYNTTDSV-DDADLVLINTCSVRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F KR+ K K+ VLGCMAER+K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EQFNVYKRK------------KPAMKVGVLGCMAERVKHAFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LLEEV+ G++ +N +LS +ETYADI+P+R++ N VTAFVS+ RGC+NMC+FCIVPFTR
Sbjct: 132 PNLLEEVEGGREAVNVILSKDETYADIAPIRLNSNGVTAFVSITRGCDNMCTFCIVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR SI+ E+ +L G KEVTLLGQNV+SY G++K+ + + N
Sbjct: 192 GRERSRDPFSIINEIGDLQARGFKEVTLLGQNVDSYLWYGGGLKKDFSKATEMQQATAIN 251
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LLD ++ +P+MR R+++ +P+D E++ M N+CKYIHLP
Sbjct: 252 -----------FAKLLDMVATAYPKMRIRFSTSNPQDMTFEVIDTMAKHHNICKYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y L+ IRQ IPD +S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSNRILKAMNRMHTREEYFALIDGIRQRIPDCAISQDMITGFPTETEEDHRDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R VDDVPEEVK+RRLTE+I+ + + +QVG
Sbjct: 361 YVKYDFGFMFAYSERPGTLAARKIVDDVPEEVKKRRLTEIIDLQQAHSLYRTQAQVGNTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D E +G++ + V F
Sbjct: 421 EVLIEGNSKKS-DQEWMGRNSQNTVVVF 447
>gi|334365883|ref|ZP_08514832.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alistipes sp. HGB5]
gi|313157989|gb|EFR57395.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alistipes sp. HGB5]
Length = 445
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/448 (48%), Positives = 288/448 (64%), Gaps = 44/448 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D EIV+S+M+ GY + E A+VI INTC+IRD AE ++W RL
Sbjct: 10 KLFVETYGCQMNVGDTEIVVSVMQREGYVYTERIDE-ADVILINTCSIRDNAEQRIWGRL 68
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+KR + N P +V V+GCMAERLK+K+++ VDVV GPD YRD
Sbjct: 69 AE---MKRYRRAN----------PGLVVGVIGCMAERLKEKLVEGPHGVDVVAGPDVYRD 115
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LPRL+ E + G KG+N LLS EETYA+I+PVR+ +N V+AFV++MRGCNN CS+C+VP+T
Sbjct: 116 LPRLVREAEAGGKGVNVLLSTEETYAEIAPVRLDRNGVSAFVAIMRGCNNFCSYCVVPYT 175
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR E+I+ EV L+ G +EVTLLGQNVNSY R E
Sbjct: 176 RGRERSRDPETILAEVRTLFGNGYREVTLLGQNVNSY----------------RFGE--- 216
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ F L+ R++ P +R R+ + HPKD D LL +M + PN+C+ IHLPA
Sbjct: 217 ---------VDFPGLMRRVASVSPLLRVRFATSHPKDISDSLLEVMAEMPNICRAIHLPA 267
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G S++L RM R YTRE YLD V IR+ +PD +++D I GF GETEEEHA TL+LM+
Sbjct: 268 QSGASSMLARMNRKYTREWYLDRVAAIRRYLPDCAVTTDLIAGFSGETEEEHAATLSLMR 327
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGY+ AYMF YS R T+AH++ DDVPEEVK RL E+I E + VG
Sbjct: 328 EVGYEFAYMFKYSERPGTYAHKHLPDDVPEEVKSARLAEIIALQNELSRASNLRDVGREF 387
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K+ + +L G++ + V F
Sbjct: 388 EVLVEGTSKR-DENQLSGRTSQNKVVVF 414
>gi|390944920|ref|YP_006408681.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Belliella baltica DSM 15883]
gi|390418348|gb|AFL85926.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Belliella baltica DSM 15883]
Length = 485
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/459 (48%), Positives = 301/459 (65%), Gaps = 35/459 (7%)
Query: 57 ADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAE 116
A+ A A + + ++Y E+YGCQMN +D EIV SIMK+ G+ + + A+
Sbjct: 13 AEEAQACDYKTTEDENTGKAKKLYIESYGCQMNFSDSEIVASIMKDNGFDTTSDF-QQAD 71
Query: 117 VIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKD 176
VIF+NTC+IR+ AE V +RL+ F +K+ +K I VLGCMAERLK+
Sbjct: 72 VIFLNTCSIREKAELTVRKRLSQFNNIKK------------NKPELTIGVLGCMAERLKE 119
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTA 236
K+L+ +K+VDVV GPDAYRDLP L+ E + G KG+NT LS EETYADISPVR++ N V+A
Sbjct: 120 KLLEEEKLVDVVVGPDAYRDLPNLVSEAEDGNKGVNTFLSREETYADISPVRLNSNGVSA 179
Query: 237 FVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDT 296
F+S+MRGC+NMCSFC+VPFTRGRERSR S+V+E EL+ +G KEVTLLGQNV+SY
Sbjct: 180 FISIMRGCDNMCSFCVVPFTRGRERSRDPHSVVREAQELFDKGFKEVTLLGQNVDSY--- 236
Query: 297 SGMEKEVEPGANWRLSEGFNSMCKVKKMG-----LRFADLLDRLSLEFPEMRFRYTSPHP 351
W E N+ ++ K + FA LL+ ++ P++R R+++ HP
Sbjct: 237 -----------KWSPEE--NNKARLNKKDDVSTIINFAHLLEMVAQVSPKLRVRFSTSHP 283
Query: 352 KDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDV 410
KD DE+L+ M+ N+C YIHLP Q+GNS VLE M R Y R YL+ V KIR+I+ +
Sbjct: 284 KDITDEVLHTMKKYDNICNYIHLPVQSGNSRVLEMMNRTYDRAWYLERVSKIREILGEEC 343
Query: 411 GLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQ 470
G+SSD I GFC ETEEEH DTLTLM V YD +YMF YS R T A + YVDD+P EVK+
Sbjct: 344 GISSDMITGFCSETEEEHQDTLTLMDIVKYDFSYMFYYSERPGTLAAKKYVDDIPLEVKK 403
Query: 471 RRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
RRL ++I+ + + + VG +Q +L+EG +K++ +
Sbjct: 404 RRLNDIIQKQSQLSEERNKLDVGKIQEILIEGASKRSEE 442
>gi|373110959|ref|ZP_09525220.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Myroides
odoratimimus CCUG 10230]
gi|423136029|ref|ZP_17123674.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Myroides
odoratimimus CIP 101113]
gi|423329797|ref|ZP_17307603.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Myroides
odoratimimus CCUG 3837]
gi|371639234|gb|EHO04852.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Myroides
odoratimimus CIP 101113]
gi|371641440|gb|EHO07024.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Myroides
odoratimimus CCUG 10230]
gi|404602705|gb|EKB02392.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Myroides
odoratimimus CCUG 3837]
Length = 482
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/449 (47%), Positives = 300/449 (66%), Gaps = 28/449 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ N GY+ N+ E A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLFIESYGCQMNFSDSEIVASILSNEGYNTTDNL-EEADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ + +KR K+P K+ VLGCMAERLK K L+ +K+VD+V GPDAY+D
Sbjct: 84 DQYNQVKR-------------KNPGMKVGVLGCMAERLKAKFLEEEKIVDMVVGPDAYKD 130
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP LL++V+ G+ IN +LS +ETY DISPVR+ N VTAFVS+ RGC+NMC+FC+VPFT
Sbjct: 131 LPNLLKDVEEGRDAINVILSKDETYGDISPVRLQSNGVTAFVSITRGCDNMCTFCVVPFT 190
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGF 315
RGRERSR +SI++E+ +L + G KE+TLLGQNV+SY G++K+ + ++ +
Sbjct: 191 RGRERSRDPQSIIEEITDLQERGFKEITLLGQNVDSYLWYGGGLKKDFDKASDMQ----- 245
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K + FA LLD+ + FP+MRFR+++ +P+D E++ + N+CKYIHLP
Sbjct: 246 ------KATAVDFAQLLDQCATTFPKMRFRFSTSNPQDMHIEVIESIARHENICKYIHLP 299
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L+ M R +TRE Y++LV KI +IPD+ LS D I GF ETEE+H DTL+LM
Sbjct: 300 VQSGSTRILQEMNRQHTREEYIELVDKIYALIPDISLSQDMITGFPTETEEDHQDTLSLM 359
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V YD +MFAYS R T A R DDVPEEVK+RRLTE+I + + + VG
Sbjct: 360 EHVRYDFGFMFAYSERPGTLAARKLEDDVPEEVKKRRLTEIIAVQNKISLERTKRFVGQT 419
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +K+ D E G++ + V F
Sbjct: 420 VEVLIEKTSKRNED-EWSGRNSQNTTVVF 447
>gi|412988361|emb|CCO17697.1| CDK5 regulatory subunit-associated protein 1 [Bathycoccus prasinos]
Length = 628
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/512 (43%), Positives = 303/512 (59%), Gaps = 70/512 (13%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYS------EVINVPENAEVIFINTCAIRDYAEHKV 133
Y ETYGCQMN D E++ +++ + GY ++I++ EVI +NTCAIRD AE +V
Sbjct: 72 YIETYGCQMNAADSEVIAAVLTSHGYEIIESKEKMISMTSPPEVILVNTCAIRDKAEERV 131
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDAD----KMVDVVC 189
RL F KK+ + + + K I VLGCM ER+K +L D ++ D+V
Sbjct: 132 KTRLR--QFRSDTTKKSSFSTQQKKKKKAVIGVLGCMGERIKGDLLKKDSKGVRLADIVA 189
Query: 190 GPDAYRDLPRLLEEV----------------------------DYGQKG----------- 210
GPD+YRDLPRL+E D G +
Sbjct: 190 GPDSYRDLPRLIENAISNNNSNNSIGKKEKKKKKEDDDNEEKNDDGNESSRKRFEPKITE 249
Query: 211 -INTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVE 266
+N LS ETY++I P+R + S +AFV++ RGC+NMC+FCIVPFTRGRERSR
Sbjct: 250 TMNVELSTTETYSEIFPMRRGRVEDMSTSAFVTIQRGCDNMCAFCIVPFTRGRERSRDSA 309
Query: 267 SIVKEVDE-LWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR------------LSE 313
SI++E + ++E +E+ LLGQNVNSY+D S E ++ +E
Sbjct: 310 SILEEAKKRFYEENAREIVLLGQNVNSYSDKSHAAAAEEESSSSSSNTATTTTSNEVYAE 369
Query: 314 GFNSM-CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
GF S+ + FA LL + PE+R R+TSPHPKDFPD LL + D PN K +
Sbjct: 370 GFKSVYMPSRNHEYDFAKLLKDVCAISPELRVRFTSPHPKDFPDNLLQTISDTPNASKLL 429
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
H+PAQ+G+++ LERM RGY+REAY++L+ K + IIPDV SSDFI GFCGETEEEH DT+
Sbjct: 430 HMPAQSGSTSALERMNRGYSREAYMNLIDKAKAIIPDVAFSSDFISGFCGETEEEHKDTI 489
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L+K V Y+ A+ FAYS+RE+T A + DDVPEEVKQRRL E+IE FRE+ + ++
Sbjct: 490 SLLKRVQYEQAFTFAYSLREKTAASKKLTDDVPEEVKQRRLAEVIETFREAAKEKAKGEI 549
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G LVLVEG +K+ D + G++D G RV F
Sbjct: 550 GKTHLVLVEGTSKR-DDAKATGRADNGKRVVF 580
>gi|344202176|ref|YP_004787319.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Muricauda
ruestringensis DSM 13258]
gi|343954098|gb|AEM69897.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Muricauda
ruestringensis DSM 13258]
Length = 487
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/448 (44%), Positives = 302/448 (67%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ G++ N+ ++A+++ +NTC+IR+ AE V +RL
Sbjct: 31 KLYIESYGCQMNFSDSEIVASILAKEGFNTTQNL-DDADLVLVNTCSIREKAEQTVRKRL 89
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F +KR +K K+ VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 90 EKFNAVKR------------TKPNMKVGVLGCMAERLKSKFLEEEKIVDMVVGPDAYKDL 137
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L++E+D G+ +N +LS +ETY D++PVR++ N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 138 PNLIQEIDEGRNAVNVILSKDETYGDVAPVRLNTNGVSAFVSITRGCDNMCTFCVVPFTR 197
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI++EV++LW++G KE+TLLGQNV+SY G++K+ + ++ +
Sbjct: 198 GRERSRDPQSILEEVNDLWEKGFKEITLLGQNVDSYLWYGGGLKKDFDKASDMQ------ 251
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K + FA LL+ ++ P+MR R+++ +P+D +++ M N+CKYIHLP
Sbjct: 252 -----KATSVNFAGLLELVAQAQPKMRIRFSTSNPQDMTLDVIEAMAKYENICKYIHLPV 306
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y +L+ IR+IIPD +S D I GF ETEE+H DTL+LM+
Sbjct: 307 QSGSNRILKAMNRLHTREEYFELIDNIRKIIPDCAISQDMITGFPTETEEDHQDTLSLME 366
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DD+P+E K+RRL E+IE ++ + +G +
Sbjct: 367 YVKYDFGFMFAYSERPGTMAERKMEDDIPDETKKRRLQEIIEVQQKHSHYRTQQHLGKTE 426
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EGP+KK+ D +G++ + V F
Sbjct: 427 EVLIEGPSKKS-DAHWMGRNSQNTVVVF 453
>gi|83596005|gb|ABC25364.1| tRNA-i(6)A37 thiotransferase enzyme [uncultured marine bacterium
Ant29B7]
Length = 484
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/448 (46%), Positives = 298/448 (66%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV+SI+ GY E + P+ A++I +NTC+IRD AE V RL
Sbjct: 30 KLYLESYGCQMNFSDSEIVVSILDKEGY-ETTSDPKEADLILLNTCSIRDKAEQTVRNRL 88
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+F +KRE K KI +LGCMAER+K K+L+ +++VD+V GPDAYRDL
Sbjct: 89 KHFKRIKRENKDM------------KIGILGCMAERVKAKLLEEEQLVDLVVGPDAYRDL 136
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P+L++E+D G+K IN LLS +ETY DI PVR+ N VTAFVS+ RGC+NMCSFC+VPFTR
Sbjct: 137 PQLMKELDGGKKAINVLLSKDETYHDIEPVRLGGNGVTAFVSITRGCDNMCSFCVVPFTR 196
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR ++IV E +LW +G KEVTLLGQNV+SY G++K+ + ++
Sbjct: 197 GRERSRNPQTIVVECQKLWADGYKEVTLLGQNVDSYLWYGGGLKKDFKVASDM------- 249
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K L+F+ LL ++ PE+R R+ + +P+D D++L + + N+CKYIHLP
Sbjct: 250 ----AKASALQFSHLLHMVANALPEIRIRFATSNPQDMSDDVLRAIAEHKNICKYIHLPV 305
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L+ M RG+ R Y+DL+ ++++IIP+ +S D + GF ETEE+H +TL+LM
Sbjct: 306 QSGSSRILKAMNRGHDRADYIDLIDRVKRIIPNCAISQDIMSGFPTETEEDHNETLSLMS 365
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YMFAYS R T A R DDVP VK+RRL E+I+ + + + + VG V
Sbjct: 366 QVRYNFGYMFAYSERPNTMAARKLEDDVPLAVKKRRLQEIIDLQQVHSAERNAANVGQVV 425
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +K++ D ++ G++ + F
Sbjct: 426 EVLIEGYSKRS-DKDVFGRTSQNAVAVF 452
>gi|148907407|gb|ABR16837.1| unknown [Picea sitchensis]
Length = 332
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 183/242 (75%), Positives = 223/242 (92%), Gaps = 2/242 (0%)
Query: 285 LLGQNVNSYNDTSGMEKE--VEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM 342
LLGQNVNSYND S ++ V G +W LS+GF+S+CKVK GLRF++LLDRLS+EFPEM
Sbjct: 2 LLGQNVNSYNDISILDGNGAVPTGNSWALSQGFSSICKVKSTGLRFSNLLDRLSIEFPEM 61
Query: 343 RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQK 402
RFR+TSPHPKDFPD+LL++M+DR N+C+ IHLPAQ+G++AVLERMRRGYTRE YLDLV++
Sbjct: 62 RFRFTSPHPKDFPDDLLFLMKDRWNICRSIHLPAQSGSTAVLERMRRGYTREVYLDLVER 121
Query: 403 IRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVD 462
I+ IIPDVGLSSDFICGFCGETE++HADTL+L+K+VGYDMAY+FAYS+RE+THAHRNYVD
Sbjct: 122 IQNIIPDVGLSSDFICGFCGETEQDHADTLSLIKSVGYDMAYLFAYSLREKTHAHRNYVD 181
Query: 463 DVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
DVP++VKQRRL+ELI AFRESTGQ YDSQVGT QL+LVEGPNK+AP++EL+GKSDRGHR+
Sbjct: 182 DVPDDVKQRRLSELISAFRESTGQRYDSQVGTTQLLLVEGPNKRAPESELIGKSDRGHRI 241
Query: 523 AF 524
+F
Sbjct: 242 SF 243
>gi|213963289|ref|ZP_03391546.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sputigena
Capno]
gi|213954151|gb|EEB65476.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sputigena
Capno]
Length = 482
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/448 (46%), Positives = 295/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ GY+ V ++A+++ INTC++R+ AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILSKVGYNTTDTV-DDADLVLINTCSVREKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F KR+ K K+ VLGCMAER+K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EQFNVYKRK------------KPTMKVGVLGCMAERVKHAFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LLEEVD G++ +N +LS +ETYADI+P+R++ N VTAFVS+ RGC+NMC+FCIVPFTR
Sbjct: 132 PNLLEEVDEGREAVNVILSKDETYADIAPIRLNSNGVTAFVSITRGCDNMCTFCIVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR SI+ E+ +L G KEVTLLGQNV+SY G++K+ + + + N
Sbjct: 192 GRERSRDPYSILNEIADLQARGFKEVTLLGQNVDSYLWYGGGLKKDFSKASEMQQATAIN 251
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LLD ++ PEMR R+++ +P+D +++ M PN+CKYIHLP
Sbjct: 252 -----------FAKLLDMVATAQPEMRIRFSTSNPQDMTLDVIDTMAKHPNICKYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y L+ IR+ IP+ +S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSNRILKAMNRLHTREEYFTLIDSIRERIPECAISQDMIAGFPTETEEDHRDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPEEVK+RRL E+I+ ++ + +QVG V
Sbjct: 361 YVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQKHSLYRTQAQVGKVV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D E +G++ + V F
Sbjct: 421 EVLIEGTSKKSAD-EWMGRNTQNTVVVF 447
>gi|326334454|ref|ZP_08200666.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 338 str. F0234]
gi|325693421|gb|EGD35348.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 338 str. F0234]
Length = 481
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/457 (46%), Positives = 299/457 (65%), Gaps = 30/457 (6%)
Query: 71 SEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAE 130
S+ + ++Y E+YGCQMN +D EIV SI+ G++ + E A++I INTC++R+ AE
Sbjct: 18 SDTKNTRKLYIESYGCQMNFSDSEIVASILHKEGFNTTDKLHE-ADLILINTCSVREKAE 76
Query: 131 HKVWQRLNYFWFLKREWKKNVATGRSQSKHPP--KIVVLGCMAERLKDKILDADKMVDVV 188
+ +RL F +KR H P ++ VLGCMAERLK K L+ + +VD+V
Sbjct: 77 QTIRKRLEQFNTVKR--------------HKPAMRVGVLGCMAERLKHKFLEEEHIVDLV 122
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
GPDAY+DLP LL EVD G+ +N LS +ETYADISP+R++ N VTAFVS+ RGC+NMC
Sbjct: 123 VGPDAYKDLPNLLTEVDNGRDAVNVQLSKDETYADISPIRLNSNGVTAFVSITRGCDNMC 182
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGA 307
+FCIVPFTRGRERSR SI+ E+ EL + G KE+TLLGQNV+SY G++K+ E +
Sbjct: 183 TFCIVPFTRGRERSRDPHSIINEIAELQQRGYKEITLLGQNVDSYLWYGGGLKKDFEKAS 242
Query: 308 NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
+ + K + FA LLD ++ EFP+MR R+++ +P+D +++ M N
Sbjct: 243 DIQ-----------KVTAVNFAKLLDIVASEFPKMRIRFSTSNPQDMTLDVIDTMAKHHN 291
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
+CKYIHLP Q+G++ +L+ M R +TRE Y L+ IR+ IPD +S D I GF ETEE+
Sbjct: 292 ICKYIHLPVQSGSNRILKAMNRLHTREEYFALIDGIRERIPDCAISQDMITGFPTETEED 351
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
H DTL+LM+ V YD +MFAYS R T A R +DDVPEEVK+RRL E+I+ ++ +
Sbjct: 352 HQDTLSLMEYVKYDFGFMFAYSERPGTLAARKILDDVPEEVKKRRLAEIIDLQQKHSHYR 411
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+QVG VL+EG +KK+ D E +G++ + V F
Sbjct: 412 TQAQVGKTVEVLIEGNSKKS-DQEWMGRNTQNTVVVF 447
>gi|256820151|ref|YP_003141430.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Capnocytophaga
ochracea DSM 7271]
gi|256581734|gb|ACU92869.1| RNA modification enzyme, MiaB family [Capnocytophaga ochracea DSM
7271]
Length = 482
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/448 (46%), Positives = 295/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ AGY+ V E A+++ INTC++R+ AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILSKAGYNTTDTVDE-ADLVLINTCSVREKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F KR+ K K+ VLGCMAER+K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EQFNVYKRK------------KPAMKVGVLGCMAERVKHAFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LLEEV+ G++ +N +LS +ETYADI+P+R++ N VTAFVS+ RGC+NMC+FCIVPFTR
Sbjct: 132 PNLLEEVEEGREAVNVILSKDETYADIAPIRLNSNGVTAFVSITRGCDNMCTFCIVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR SI+ E+ +L G KEVTLLGQNV+SY G++K+ + + + N
Sbjct: 192 GRERSRDPYSILNEIADLQARGFKEVTLLGQNVDSYLWYGGGLKKDFSKASEMQQATAIN 251
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LLD +++ PEMR R+++ +P+D +++ M PN+CKYIHLP
Sbjct: 252 -----------FAKLLDMVAIAQPEMRIRFSTSNPQDMTLDVIDTMAKHPNICKYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y L+ IR+ IP+ +S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSNRILKAMNRLHTREEYFALIDSIRERIPECAISQDMIAGFPTETEEDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPEEVK+RRL E+I+ ++ + +Q+G
Sbjct: 361 YVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQKHSLYRTQAQIGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D E +G++ + V F
Sbjct: 421 EVLIEGNSKKS-DKEWMGRNSQNTVVVF 447
>gi|325106271|ref|YP_004275925.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pedobacter saltans DSM
12145]
gi|324975119|gb|ADY54103.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pedobacter saltans DSM
12145]
Length = 473
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/456 (48%), Positives = 307/456 (67%), Gaps = 38/456 (8%)
Query: 71 SEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAE 130
S+ ++ ++Y E+YGCQMN +D EIV SI+ +AG+ + E A+V+FINTC+IR+ AE
Sbjct: 25 SKSNTGRKLYVESYGCQMNFSDSEIVASILSDAGFVTTSDYKE-ADVVFINTCSIRENAE 83
Query: 131 HKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVC 189
+V RL F G S+ + P ++ VLGCMAERLK K L+ +K+VD+V
Sbjct: 84 IRVRNRLKEF-------------GASKVRKPDMLIGVLGCMAERLKSKFLEEEKIVDLVV 130
Query: 190 GPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
GPDAYRDLP L+ +VD G K +N LLS EETYADI+PVR++ N +TAF+S+MRGC+NMCS
Sbjct: 131 GPDAYRDLPNLIGKVDEGNKAVNVLLSREETYADINPVRLNSNGITAFISIMRGCDNMCS 190
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
FC+VPFTRGRERSR SI+KE +L+ G +EVTLLGQNV+SY W
Sbjct: 191 FCVVPFTRGRERSRDPHSIIKEAQDLFNAGYREVTLLGQNVDSY--------------KW 236
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
+ S+ N+ + FA LL++++L P++R R+++ HPKD D++LY M N+C
Sbjct: 237 KASDEENA------ESVNFAQLLEKVALVHPDLRVRFSTSHPKDITDDVLYTMAKYENIC 290
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
KYIHLP Q+GNS VLE M R Y RE Y++ + IR+I+P+ +S+D I GFC ETEEEH
Sbjct: 291 KYIHLPVQSGNSRVLEVMNRTYDREWYMEKINAIRRILPECAISTDIITGFCTETEEEHQ 350
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
+TL++ + V YD AYMF+YS R T A + + DDVPE VK+RRL E+I A +++ G
Sbjct: 351 ETLSMQEFVKYDFAYMFSYSERPGTPAAKKFTDDVPEAVKKRRLEEVI-ALQQTHGYYRL 409
Query: 490 SQ-VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +G V+ VL+EG ++K+ + + G++D+ V F
Sbjct: 410 QQHIGKVEKVLIEGFSRKSKE-DYCGRNDQNCMVVF 444
>gi|406025662|ref|YP_006705963.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
gi|404433261|emb|CCM10543.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
Length = 484
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/449 (47%), Positives = 282/449 (62%), Gaps = 28/449 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SIM G+ + A++I INTCAIRD AE + RL
Sbjct: 33 KLYIESYGCQMNFSDSEIVASIMAQQGFV-FTDQHHKADLILINTCAIRDKAEQTIRNRL 91
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
F + + P IV +LGCMAERLK ++L+ +K+VD++ GPDAYRD
Sbjct: 92 LVF-------------NQQKISQPDLIVGILGCMAERLKTQLLEEEKVVDLIAGPDAYRD 138
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LPRL+ +VD G K +NT LS EETYADI+P+R+ + VTAF+S+MRGCNNMCSFCIVPFT
Sbjct: 139 LPRLISQVDQGYKAVNTFLSKEETYADIAPIRLHSSGVTAFISIMRGCNNMCSFCIVPFT 198
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SIV+E +L++ G KE+TLLGQNV+SY+ + P +N
Sbjct: 199 RGRERSRDPYSIVQEAKKLFEAGYKEITLLGQNVDSYSWHPSVASATHPLSN-------- 250
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K + F+ LL ++ P +R R+++ HPKD D +LY M+ PN+CK+IHLP
Sbjct: 251 ---KANDQVIHFSQLLAMVAEIDPTLRVRFSTSHPKDMTDAVLYTMKRYPNICKHIHLPV 307
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+GNS +L M R Y R YL+ +Q IR I+ P +SSD I GFC ETE EH DTL+LM
Sbjct: 308 QSGNSRILALMNRTYDRAWYLERIQAIRTILGPFCAISSDMIAGFCSETEAEHHDTLSLM 367
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
V YD ++MF YS R T A R Y DDVPE VK+RRL+E+I R + V
Sbjct: 368 DEVQYDFSFMFYYSQRPGTLAARKYPDDVPETVKKRRLSEIIAKQRAHALMHNQKSIDQV 427
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK+ + L G++ + V F
Sbjct: 428 HQVLIEKRSKKS-EAFLQGRTSQNKIVVF 455
>gi|332662143|ref|YP_004444931.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Haliscomenobacter hydrossis DSM 1100]
gi|332330957|gb|AEE48058.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Haliscomenobacter hydrossis DSM 1100]
Length = 481
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/446 (47%), Positives = 287/446 (64%), Gaps = 36/446 (8%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
Y E+YGCQMN +D EIV SI+ G+ N+ E A++I +NTC+IR+ AE V +RL
Sbjct: 42 FYIESYGCQMNFSDSEIVASILAEVGFKPTRNL-ELADLILVNTCSIREKAEETVRKRLR 100
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
F +KR+ K G VLGCMAERLK K L+ +++VD+V GPDAYRDLP
Sbjct: 101 IFDAIKRQ-KPGTLVG-----------VLGCMAERLKSKFLEEERLVDLVVGPDAYRDLP 148
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+L+ + G KG+N LS EETYADISP+R+ V+AF+S+MRGC+NMCSFC+VPFTRG
Sbjct: 149 KLVATAEDGDKGVNVFLSREETYADISPLRLDSKGVSAFISIMRGCDNMCSFCVVPFTRG 208
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERSR SI+ E EL++ G +EVTLLGQNV+SY T+ E E N
Sbjct: 209 RERSRDAFSILAEAQELYERGYREVTLLGQNVDSYKWTN---PETETLVN---------- 255
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
FA LL+ ++L P++R R+++ HPKD +E+L+ + PN+CKYIHLP Q+
Sbjct: 256 ---------FAHLLEMVALVAPDLRVRFSTSHPKDITNEVLHTIAKYPNICKYIHLPVQS 306
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
GNS VLERM R Y RE Y++ ++ IRQIIPD +SSD I GFC ETE EH DTL++++
Sbjct: 307 GNSNVLERMNRTYDREWYMERIEAIRQIIPDCAISSDIIAGFCSETEAEHQDTLSMIEFA 366
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
Y M+YMF YS R T A R Y DD+ EVK+RRL E+I + + + VG V V
Sbjct: 367 DYSMSYMFFYSERPGTLAARKYPDDITLEVKKRRLQEIINLQSQVSYRHNQRDVGKVYEV 426
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
L+EG ++K+ + + G++ + + F
Sbjct: 427 LIEGDSRKS-EQDFCGRNSQNKMIVF 451
>gi|429746821|ref|ZP_19280144.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 380 str. F0488]
gi|429164993|gb|EKY07078.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 380 str. F0488]
Length = 527
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/452 (46%), Positives = 296/452 (65%), Gaps = 26/452 (5%)
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
++ ++Y E+YGCQMN +D EIV SI+ AGY+ + E A+++ INTC++R+ AE +
Sbjct: 66 NNSKKLYIESYGCQMNFSDSEIVASILSKAGYNTTDTIDE-ADLVLINTCSVREKAEQTI 124
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDA 193
+RL F KR+ K K+ VLGCMAER+K L+ +K+VD+V GPDA
Sbjct: 125 RKRLEQFNVYKRK------------KPAMKVGVLGCMAERVKHSFLEEEKIVDMVVGPDA 172
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
Y+DLP LLEEV+ G++ +N +LS +ETYADI+P+R++ N VTAFVS+ RGC+NMC+FCIV
Sbjct: 173 YKDLPNLLEEVEEGREAVNVILSKDETYADITPIRLNSNGVTAFVSITRGCDNMCTFCIV 232
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLS 312
PFTRGRERSR SI+ E+ +L G KEVTLLGQNV+SY G++K+ + + +
Sbjct: 233 PFTRGRERSRDPYSILNEIADLQARGFKEVTLLGQNVDSYLWYGGGLKKDFSKASEMQQA 292
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
N FA LLD ++ PEMR R+++ +P+D +++ M PN+CKYI
Sbjct: 293 TAIN-----------FAKLLDMVATAQPEMRIRFSTSNPQDMTLDVIDTMAKHPNICKYI 341
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G++ +L+ M R +TRE Y L+ IR+ IP+ +S D I GF ETEE+H DTL
Sbjct: 342 HLPVQSGSNRILKAMNRLHTREEYFALIDSIRERIPECAISQDMIAGFPTETEEDHQDTL 401
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+LM+ V YD +MFAYS R T A R DDVPEEVK+RRL E+I+ ++ + +Q+
Sbjct: 402 SLMEYVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQKHSLYRTQAQI 461
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VL+EG +KK+ D E +G++ + V F
Sbjct: 462 GKTVEVLIEGNSKKS-DKEWMGRNSQNTVVVF 492
>gi|393779927|ref|ZP_10368158.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 412 str. F0487]
gi|392609295|gb|EIW92106.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 412 str. F0487]
Length = 482
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/448 (46%), Positives = 295/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ AGY+ V ++A+++ INTC++R+ AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILSKAGYNTTDTV-DDADLVLINTCSVREKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F KR+ K K+ VLGCMAER+K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EQFNVYKRK------------KPAMKVGVLGCMAERVKHAFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LLEEV+ G++ +N +LS +ETYADI+P+R++ N VTAFVS+ RGC+NMC+FCIVPFTR
Sbjct: 132 PNLLEEVEEGREAVNVILSKDETYADIAPIRLNSNGVTAFVSITRGCDNMCTFCIVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR SI+ E+ +L G KEVTLLGQNV+SY G++K+ + + + N
Sbjct: 192 GRERSRDPYSILNEIADLQARGFKEVTLLGQNVDSYLWYGGGLKKDFSKASEMQQATAIN 251
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LLD ++ PEMR R+++ +P+D +++ M PN+CKYIHLP
Sbjct: 252 -----------FAKLLDMVATAQPEMRIRFSTSNPQDMTLDVIDTMAKHPNICKYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y L+ IR+ IP+ +S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSNRILKAMNRLHTREEYFTLINSIRERIPECAISQDMIAGFPTETEEDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPEEVK+RRL E+I+ ++ + +Q+G
Sbjct: 361 YVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQKHSLYRTQAQIGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D E +G++ + V F
Sbjct: 421 EVLIEGNSKKS-DKEWMGRNSQNTVVVF 447
>gi|429751358|ref|ZP_19284278.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 326 str. F0382]
gi|429180780|gb|EKY21982.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 326 str. F0382]
Length = 482
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/448 (46%), Positives = 294/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ AGY+ V E A+++ INTC++R+ AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILSKAGYNTTDTVDE-ADLVLINTCSVREKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F KR+ K K+ VLGCMAER+K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EQFNVYKRK------------KPTMKVGVLGCMAERVKHAFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LLEEV+ G++ +N +LS +ETYADI+P+R++ N VTAFVS+ RGC+NMC+FCIVPFTR
Sbjct: 132 PNLLEEVEEGREAVNVILSKDETYADIAPIRLNSNGVTAFVSITRGCDNMCTFCIVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR SI+ E+ +L G KEVTLLGQNV+SY G++K+ + + + N
Sbjct: 192 GRERSRDPYSILNEIADLQARGFKEVTLLGQNVDSYLWYGGGLKKDFSKASEMQQATAIN 251
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LLD ++ PEMR R+++ +P+D +++ M PN+CKYIHLP
Sbjct: 252 -----------FAKLLDMVATAQPEMRIRFSTSNPQDMTLDVIDTMAKHPNICKYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y L+ IR+ IP+ +S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSNRILKAMNRLHTREEYFTLIDSIRERIPECAISQDMIAGFPTETEEDHRDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPEEVK+RRL E+I+ ++ + +QVG V
Sbjct: 361 YVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQKHSLYRTQAQVGKVV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ E +G++ + V F
Sbjct: 421 EVLIEGTSKKSA-AEWMGRNTQNTVVVF 447
>gi|260061724|ref|YP_003194804.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Robiginitalea
biformata HTCC2501]
gi|88785856|gb|EAR17025.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Robiginitalea biformata
HTCC2501]
Length = 481
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/448 (46%), Positives = 293/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ G++ + E A++I +NTC+IR+ AE V +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILGQEGFNTTSRL-EEADLILVNTCSIREKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+F LK+ S K+ VLGCMAERLK + L+ +K+VD+V GPDAY+DL
Sbjct: 84 VHFNGLKK------------SNPGVKVGVLGCMAERLKSQFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ EVD GQ +N +LS EETYAD+SPVR+ N VTAFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLVREVDSGQNAVNVILSKEETYADVSPVRLGSNGVTAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI++EV +LW G KEVTLLGQNV+SY G++K+ + + + + N
Sbjct: 192 GRERSRDPQSILREVGDLWANGYKEVTLLGQNVDSYLWYGGGLKKDFDKASPMQQATAVN 251
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LL+ + +P MRFR+++ +P+D +++ M N+C YIHLP
Sbjct: 252 -----------FAGLLEMAATAYPGMRFRFSTSNPQDMTLDVIETMARFDNICNYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TRE Y L+ IR++IPD G+S D I GF ETEE+H TL+LM
Sbjct: 301 QSGSDRILKAMNRLHTREEYFGLIDNIRRLIPDCGISQDMIAGFPTETEEDHQQTLSLMD 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVP+ VK+RRL E+I+ + + + + +G V+
Sbjct: 361 YVKYDFGFMFAYSERPGTLAARKMADDVPDAVKKRRLREIIDKQQAHSLERNQAHIGRVE 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EGP++K+ D +G++ + V F
Sbjct: 421 EVLIEGPSRKS-DAHWMGRNTQNTVVVF 447
>gi|254495105|ref|ZP_05108029.1| tRNA-i(6)A37 modification enzyme MiaB [Polaribacter sp. MED152]
gi|85819455|gb|EAQ40612.1| tRNA-i(6)A37 modification enzyme MiaB [Polaribacter sp. MED152]
Length = 484
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/448 (45%), Positives = 301/448 (67%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN+ND EIV +I+ GY+ + E A+++ +NTC+IR+ AE V +RL
Sbjct: 28 KLFIESYGCQMNMNDSEIVAAILDKEGYN-TTQILEEADLVLVNTCSIREKAETTVRRRL 86
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +K+ KK K+ VLGCMAERLK+K L+ +K+VD+V GPDAY+DL
Sbjct: 87 QKYNAVKQVNKK------------MKVGVLGCMAERLKEKFLEEEKIVDLVVGPDAYKDL 134
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LLEEV G+ +N +LS EETY DISPVR++ N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 135 PNLLEEVYEGRDAVNVILSKEETYGDISPVRLNSNGVSAFVSITRGCDNMCTFCVVPFTR 194
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI++E+ ++ + KE+TLLGQNV+S+ G++K+ + +
Sbjct: 195 GRERSRDPKSILEEIQQMVDKNYKEITLLGQNVDSFLWYGGGLKKDFKKASEM------- 247
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ + FA LLD + +FP+ RFR+++ +P+D +++++M N+CKYIHLP
Sbjct: 248 ----AQATAVDFAQLLDMCATQFPKTRFRFSTSNPQDMSLDVIHVMAKHRNICKYIHLPV 303
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++A+L+ M R +TRE Y++LV I +I+P++ LS D I GFCGETE++H DTL LM+
Sbjct: 304 QSGSNAMLKAMNRQHTREEYMELVDNIFKIVPEMALSQDMIVGFCGETEQDHQDTLDLME 363
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A + DDVPE VK+RRLTE+I+ ++ +G V+
Sbjct: 364 YVKYDFGFMFAYSERPGTLAGKKMEDDVPEAVKKRRLTEVIDLQQKHALYRTQQHLGKVE 423
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK P+ E G++ + + F
Sbjct: 424 EVLIEGTSKKNPN-EWKGRNTQNTVIVF 450
>gi|365961356|ref|YP_004942923.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Flavobacterium
columnare ATCC 49512]
gi|365738037|gb|AEW87130.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Flavobacterium
columnare ATCC 49512]
Length = 483
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/449 (46%), Positives = 294/449 (65%), Gaps = 28/449 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ GY+ N+ E A+++ +NTC+IRD AE V +RL
Sbjct: 25 KMFIESYGCQMNFSDSEIVASILTEQGYNTTQNLQE-ADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ +K+ +P K+ VLGCMAERLK+K L+ +K+VD+V GPDAY+D
Sbjct: 84 EQYNAIKK-------------VNPTMKVGVLGCMAERLKEKFLEEEKIVDLVVGPDAYKD 130
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
+P LL EV+ G+ IN +LS EETY DI PVR++ N V AFVS+ RGC+NMC+FC+VPFT
Sbjct: 131 IPNLLSEVEEGRDAINVILSKEETYGDIQPVRLNSNGVNAFVSITRGCDNMCTFCVVPFT 190
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGF 315
RGRERSR +SI++E+ +LW +G KEVTLLGQNV+SY G++K+ + +
Sbjct: 191 RGRERSREPQSIIEEIQDLWNKGYKEVTLLGQNVDSYLWYGGGLKKDFIKASEMQ----- 245
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K + F+ LLD + +FP+MRFR+++ +P+D E++ M N+CKYIHLP
Sbjct: 246 ------KATAVDFSQLLDLCATKFPKMRFRFSTSNPQDMHLEVIETMAKHHNICKYIHLP 299
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L+ M R +TRE YL+LV KI QIIPD+ LS D I GF ETEE+H DTL+LM
Sbjct: 300 VQSGSTRILKEMNRQHTREEYLELVDKIYQIIPDISLSQDMIAGFPTETEEDHKDTLSLM 359
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
YD +MFAYS R T A R DD+PEEVK+RRL E+I+ ++ Q +G
Sbjct: 360 AHCKYDFGFMFAYSERPGTLAARKMEDDIPEEVKKRRLNEIIDLQQKLGLQRTQRFIGQT 419
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +K++ D G++ + V F
Sbjct: 420 VEVLVEKDSKRS-DQHWSGRNSQNTVVVF 447
>gi|408370216|ref|ZP_11167994.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Galbibacter
sp. ck-I2-15]
gi|407744294|gb|EKF55863.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Galbibacter
sp. ck-I2-15]
Length = 481
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/448 (45%), Positives = 296/448 (66%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ G++ + E+A+++ +NTC+IRD AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILSKEGFNTTQEM-EDADLVLVNTCSIRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F +KR K K+ VLGCMAERLKDK L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKFNAVKRINPK------------MKVGVLGCMAERLKDKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L++E+D G+ +N +LS EETY DISPVR++ N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLVQEIDQGRDAVNVILSKEETYGDISPVRLNSNGVSAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI+ EV +LW G KE+TLLGQNV+SY G++K+ + +
Sbjct: 192 GRERSRDPQSILDEVRDLWDRGFKEITLLGQNVDSYLWYGGGLKKDFAKATDIQ------ 245
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K + FA+LL+ ++L P+MR R+++ +P+D ++++ M N+C YIHLP
Sbjct: 246 -----KATAVNFANLLELVALAQPKMRIRFSTSNPQDMTLDVIHTMAAHKNICNYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ A+L+ M R +TR Y +L+ IR+I+P+ +S D I GF ETE++H DTL+LM+
Sbjct: 301 QSGSDAILKAMNRLHTRAEYFELIDNIRKILPECAISQDMITGFPTETEQDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPE+VK+RRLTE+I ++ + +G +
Sbjct: 361 YVKYDFGFMFAYSERPGTLAERKMEDDVPEDVKKRRLTEIINLQQKHSHYRTQQHLGKTE 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D +G++ + V F
Sbjct: 421 EVLIEGTSKKS-DMHWMGRNSQNTVVVF 447
>gi|429756483|ref|ZP_19289075.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 324 str. F0483]
gi|429171224|gb|EKY12858.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 324 str. F0483]
Length = 482
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/448 (46%), Positives = 294/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ AGY+ V E A+++ INTC++R+ AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILSKAGYNTTDTVDE-ADLVLINTCSVREKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F KR+ K K+ VLGCMAER+K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EQFNVYKRK------------KPAMKVGVLGCMAERVKHAFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LLEEV+ G++ +N +LS +ETYADI+P+R++ N VTAFVS+ RGC+NMC+FCIVPFTR
Sbjct: 132 PNLLEEVEEGREAVNVILSKDETYADIAPIRLNSNGVTAFVSITRGCDNMCTFCIVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR SI+ E+ +L G KEVTLLGQNV+SY G++K+ + + + N
Sbjct: 192 GRERSRDPYSILNEIADLQARGFKEVTLLGQNVDSYLWYGGGLKKDFSKASEMQQATAIN 251
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LLD ++ PEMR R+++ +P+D +++ M PN+CKYIHLP
Sbjct: 252 -----------FAKLLDMVATAQPEMRIRFSTSNPQDMTLDVIDTMAKHPNICKYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y L+ IR+ IP+ +S D I GF ETE++H DTL+LM+
Sbjct: 301 QSGSNRILKAMNRLHTREEYFALIDSIRERIPECAISQDMIAGFPTETEDDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPEEVK+RRL E+I+ ++ + +Q+G
Sbjct: 361 YVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQKHSLYRTQAQIGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D E +G++ + V F
Sbjct: 421 EVLIEGNSKKS-DKEWMGRNSQNTVVVF 447
>gi|420149796|ref|ZP_14656964.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 335 str. F0486]
gi|394752993|gb|EJF36598.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 335 str. F0486]
Length = 482
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/448 (46%), Positives = 294/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ AGY+ V E A+++ INTC++R+ AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILSKAGYNTTDTVDE-ADLVLINTCSVREKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F KR+ K K+ VLGCMAER+K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EQFNVYKRK------------KPAMKVGVLGCMAERVKHAFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LLEEV+ G++ +N +LS +ETYADI+P+R++ N VTAFVS+ RGC+NMC+FCIVPFTR
Sbjct: 132 PNLLEEVEEGREAVNVILSKDETYADIAPIRLNSNGVTAFVSITRGCDNMCTFCIVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR SI+ E+ +L G KEVTLLGQNV+SY G++K+ + + + N
Sbjct: 192 GRERSRDPYSILNEIADLQARGFKEVTLLGQNVDSYLWYGGGLKKDFSKASEMQQATAIN 251
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LLD ++ PEMR R+++ +P+D +++ M PN+CKYIHLP
Sbjct: 252 -----------FAKLLDMVATAQPEMRIRFSTSNPQDMTLDVIDTMAKHPNICKYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y L+ IR+ IP+ +S D I GF ETE++H DTL+LM+
Sbjct: 301 QSGSNRILKAMNRLHTREEYFALIDSIRERIPECAISQDMIAGFPTETEDDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPEEVK+RRL E+I+ ++ + +Q+G
Sbjct: 361 YVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQKHSLYRTQAQIGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D E +G++ + V F
Sbjct: 421 EVLIEGNSKKS-DKEWMGRNSQNTVVVF 447
>gi|300775426|ref|ZP_07085288.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Chryseobacterium gleum
ATCC 35910]
gi|300506166|gb|EFK37302.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Chryseobacterium gleum
ATCC 35910]
Length = 478
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/430 (47%), Positives = 285/430 (66%), Gaps = 25/430 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ GY+ + V E A++I +NTC+IR+ AE V RL
Sbjct: 26 KLFLESYGCQMNFSDSEIVASILNEQGYNTTMKV-EEADLILLNTCSIREKAEQTVRMRL 84
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ F LK+E + N+ G VLGCMAERLK K L+ +++VD+V GPDAYRDL
Sbjct: 85 SQFKNLKKE-RPNMTVG-----------VLGCMAERLKTKFLEEEQLVDLVVGPDAYRDL 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL+E D G+ IN +LS EETYADI+PVR+ N VTAFV++ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLLKETDDGRDAINVILSKEETYADINPVRLGGNGVTAFVTITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SI++E +L G KE+TLLGQNV+SY G K + F
Sbjct: 193 GRERSRDPHSIIEECKDLANNGYKEITLLGQNVDSYLWYGGGPK-----------KDFAK 241
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + FA LLD ++ PE+R R+++ +P+D ++ +M N+CKY+HLP
Sbjct: 242 ASEMQKATAVNFAQLLDLVAKAVPELRIRFSTSNPQDMSLDVFRMMAKHDNICKYVHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L M R +TRE YLDL++K ++I+P+V S D I GFC ETEE+H DTL+LM+
Sbjct: 302 QSGSNNMLAAMNRQHTREEYLDLIRKAKEIVPEVAFSQDMIVGFCNETEEDHQDTLSLMR 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YMFAYS R T AH+ D++P +VKQRRL E+I E + + S VG
Sbjct: 362 EVEYDYGYMFAYSERPGTPAHKKMEDNIPADVKQRRLAEVIALQGELSKKRMKSYVGREH 421
Query: 497 LVLVEGPNKK 506
+L+EG +KK
Sbjct: 422 QILIEGISKK 431
>gi|315225572|ref|ZP_07867382.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga ochracea
F0287]
gi|420159177|ref|ZP_14665984.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga ochracea
str. Holt 25]
gi|314944516|gb|EFS96555.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Capnocytophaga ochracea
F0287]
gi|394762475|gb|EJF44694.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga ochracea
str. Holt 25]
Length = 482
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/448 (46%), Positives = 295/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ AGY+ V ++A+++ INTC++R+ AE + +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILSKAGYNTTDTV-DDADLVLINTCSVREKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F KR+ K K+ VLGCMAER+K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EQFNVYKRK------------KPAMKVGVLGCMAERVKHAFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LLEEV+ G++ +N +LS +ETYADI+P+R++ N VTAFVS+ RGC+NMC+FCIVPFTR
Sbjct: 132 PNLLEEVEEGREAVNVILSKDETYADIAPIRLNSNGVTAFVSITRGCDNMCTFCIVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR SI+ E+ +L G KEVTLLGQNV+SY G++K+ + + + N
Sbjct: 192 GRERSRDPYSILNEIADLQARGFKEVTLLGQNVDSYLWYGGGLKKDFSKASEMQQATAIN 251
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LLD ++ PEMR R+++ +P+D +++ M PN+CKYIHLP
Sbjct: 252 -----------FAKLLDMVATAQPEMRIRFSTSNPQDMTLDVIDTMAKHPNICKYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y L+ IR+ IP+ +S D I GF ETE++H DTL+LM+
Sbjct: 301 QSGSNRILKAMNRLHTREEYFALIDSIRERIPECAISQDMIAGFPTETEDDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPEEVK+RRL E+I+ ++ + +Q+G
Sbjct: 361 YVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQKHSLYRTQAQIGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D E +G++ + V F
Sbjct: 421 EVLIEGNSKKS-DKEWMGRNSQNTVVVF 447
>gi|163753931|ref|ZP_02161054.1| 2-methylthioadenine synthetase [Kordia algicida OT-1]
gi|161326145|gb|EDP97471.1| 2-methylthioadenine synthetase [Kordia algicida OT-1]
Length = 481
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/450 (45%), Positives = 293/450 (65%), Gaps = 30/450 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN D E+V SI+ G++ N E A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLYIESYGCQMNFADSEVVASILAKEGFN-TTNRLEEADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPK--IVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+ +KR H PK + VLGCMAERLK K L+ +K+VD+V GPDAY+
Sbjct: 84 EKYNAVKR--------------HNPKMKVGVLGCMAERLKSKFLEEEKIVDMVVGPDAYK 129
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLP L++E+D G+ +N +LS EETY DISPVR++ N + A VS+ RGC+NMC+FC+VPF
Sbjct: 130 DLPNLIQEIDDGRNAVNVVLSKEETYGDISPVRLNTNGINALVSITRGCDNMCTFCVVPF 189
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEG 314
TRGRERSR +SI++E+ EL + KE+TLLGQNV+SY G++K+ + + +
Sbjct: 190 TRGRERSRDPQSILEEIQELSDKNFKEITLLGQNVDSYLWYGGGLKKDFDKASEMQ---- 245
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
K + FA LLD ++ +FP++R R+++ +P+D + + ++M N+CK+IHL
Sbjct: 246 -------KATAVDFAKLLDMVATKFPKLRLRFSTSNPQDMHESVFHVMAKHRNICKHIHL 298
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R +TRE Y L+ KI++I+P G+S D I GF ETEE+H DTL+L
Sbjct: 299 PVQSGSNRILKEMNRLHTREEYFALIDKIQEILPGCGVSQDLIAGFPTETEEDHQDTLSL 358
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
M+ V YD YMF YS R T A R DDVPE K+RRL E+IE R+ + S + T
Sbjct: 359 MEYVKYDFGYMFTYSERPGTMAGRKMEDDVPEATKKRRLAEIIELQRKHSAFRTKSHLNT 418
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VL+EG +KK+ D +G++ R F
Sbjct: 419 VQEVLIEGTSKKS-DEHWMGRTSRNTVTVF 447
>gi|375013422|ref|YP_004990410.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Owenweeksia hongkongensis DSM 17368]
gi|359349346|gb|AEV33765.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Owenweeksia hongkongensis DSM 17368]
Length = 480
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/441 (47%), Positives = 296/441 (67%), Gaps = 26/441 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI++ GY NV E A+++ +NTC+IRD AE V +RL
Sbjct: 29 KMYIESYGCQMNFSDSEIVASILQKEGYGTTKNVDE-ADLVLLNTCSIRDKAEQTVRKRL 87
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F +KR + KI VLGCMAERLKDK+LD +K+VD+V GPDAYRDL
Sbjct: 88 TNFNKMKR------------NNPGMKIGVLGCMAERLKDKLLDEEKLVDMVVGPDAYRDL 135
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L++E+D G+K +N LLS EETYAD+SPVR+ +N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 136 PNLVKELDEGRKAVNVLLSKEETYADVSPVRLGQNGVSAFVSITRGCDNMCTFCVVPFTR 195
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR ++I++E +L + G KE+TLLGQNV+S+ G++K+ E ++ + +
Sbjct: 196 GRERSRNPQTILEECIDLAENGYKEITLLGQNVDSFLWYGGGLKKDFEKASDAAKASAVD 255
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LL ++ P MR R+++ +P+D D++LY + + N+C YIHLP
Sbjct: 256 -----------FAMLLRMVAEAVPGMRIRFSTSNPQDMSDDVLYAIAEYDNICNYIHLPV 304
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L+ M RG+ RE Y+ LV +I++IIP G+S D I GF ETEE+H +TL+LM
Sbjct: 305 QSGSSRILKLMNRGHNREEYMGLVDRIKKIIPGCGISHDLITGFPTETEEDHQETLSLMD 364
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGYD YMF YS R T+A R DD+P EVK+RRL ++I + + +G V
Sbjct: 365 YVGYDFGYMFYYSERPNTYAERKMEDDIPLEVKKRRLNDIIVKQQALSLANNKKHLGKVV 424
Query: 497 LVLVEGPNKKAPDTELVGKSD 517
VL+EG +KK+ D++ G++D
Sbjct: 425 EVLIEGSSKKS-DSDWYGRTD 444
>gi|126663275|ref|ZP_01734273.1| 2-methylthioadenine synthetase [Flavobacteria bacterium BAL38]
gi|126624933|gb|EAZ95623.1| 2-methylthioadenine synthetase [Flavobacteria bacterium BAL38]
Length = 482
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/449 (45%), Positives = 297/449 (66%), Gaps = 28/449 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ GY+ N+ E+A+++ +NTC+IRD AE + +RL
Sbjct: 25 KLFIESYGCQMNFSDSEIVASILYENGYNTTQNL-EDADLVLVNTCSIRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ +K+ +P K+ VLGCMAERLK + L+ +K+VD+V GPDAY+D
Sbjct: 84 EKYNAVKK-------------INPTMKVGVLGCMAERLKSQFLEEEKIVDMVVGPDAYKD 130
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP LL EV+ G+ IN +LS EETY DISPVR++ N V AFVS+ RGC+NMC+FC+VPFT
Sbjct: 131 LPNLLAEVEEGRDAINVILSKEETYGDISPVRLNSNGVNAFVSITRGCDNMCTFCVVPFT 190
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR +SI+ E+ +L+ G KEVTLLGQNV+SY G L + ++
Sbjct: 191 RGRERSREPQSIIDEIQDLYDRGFKEVTLLGQNVDSYLWYGG-----------GLKKDYD 239
Query: 317 SMCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+++K + FA LLD+ + FP+MRFR+++ +P+D +E+L+++ N+C YIHLP
Sbjct: 240 KATEIQKATAMDFAQLLDKCATLFPKMRFRFSTSNPQDMHEEVLHVIAKHHNICNYIHLP 299
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L+ M R +TRE Y+ L+ KI IIPD+ LS D I GF ETEE+H DTL+LM
Sbjct: 300 VQSGSTRILKEMNRQHTREEYMALIDKIYSIIPDISLSQDMIAGFPTETEEDHQDTLSLM 359
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V YD +MFAYS R T A R DDVPEEVK+RRLTE+++ ++ + +G
Sbjct: 360 EYVKYDFGFMFAYSERPGTLAARKMEDDVPEEVKKRRLTEIVDLQQKHGLERTQRFIGQE 419
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +K++ D G++ + V F
Sbjct: 420 VEVLIEKESKRS-DAHWSGRNSQNTVVVF 447
>gi|333029498|ref|ZP_08457559.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides coprosuis DSM 18011]
gi|332740095|gb|EGJ70577.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides coprosuis DSM 18011]
Length = 459
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/468 (44%), Positives = 299/468 (63%), Gaps = 45/468 (9%)
Query: 57 ADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAE 116
ADL A+E++ + ++ ETYGCQMNV D E+V S+MK AGY E+ E A+
Sbjct: 8 ADLKSATEIA---------EKKLLIETYGCQMNVADSEVVASVMKMAGY-EITEDLEEAD 57
Query: 117 VIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKD 176
+F+NTC+IR+ AE K+++RL+YF+ +KR KK + G VLGCMAER+K
Sbjct: 58 AVFLNTCSIRENAELKIYKRLDYFYSMKRRKKKGLIIG-----------VLGCMAERVKQ 106
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTA 236
+++ + ++V GPDAY LP L+ V+ G+K I+ LS ETY DI P R+ +++
Sbjct: 107 SLIE-EHHANLVVGPDAYLSLPDLIASVEAGEKAIDIELSTTETYKDIIPSRLCGTAISG 165
Query: 237 FVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDT 296
FVS+MRGCNN C++CIVP+TRGRERSR VESI+ EVD+L K+G KE+TLLGQNVNSY+
Sbjct: 166 FVSIMRGCNNFCTYCIVPYTRGRERSREVESILNEVDDLIKKGYKEITLLGQNVNSYHFI 225
Query: 297 SGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPD 356
+ E G + ++F LL+ ++ P R R+++ HPKD D
Sbjct: 226 NK-----ETGED-----------------IQFHHLLEIVATHAPSTRIRFSTSHPKDMSD 263
Query: 357 ELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDF 416
+ L ++ PN+CK+IHLP Q+G+S +L+ M R YTRE YLD ++ I++IIP+ G+++D
Sbjct: 264 DTLRVIAKTPNICKHIHLPVQSGSSRILKLMNRKYTREWYLDRIEAIKRIIPNCGITTDI 323
Query: 417 ICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
CGF ETEE+H +L+LM+ +D A+MF YS R T+A +N DDVPEE+K RRL E+
Sbjct: 324 FCGFHSETEEDHQMSLSLMEQCQFDYAFMFKYSERPGTYASKNLPDDVPEEIKTRRLNEI 383
Query: 477 IEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
IE + + + +G VLVEG +KK+ D +L G+S + V F
Sbjct: 384 IELQSKLSLASNKADIGQTYEVLVEGVSKKSKD-QLFGRSQQNKVVIF 430
>gi|429750565|ref|ZP_19283589.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 332 str. F0381]
gi|429164536|gb|EKY06665.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 332 str. F0381]
Length = 482
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/455 (45%), Positives = 294/455 (64%), Gaps = 26/455 (5%)
Query: 71 SEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAE 130
S + ++Y E+YGCQMN +D EIV SI+ GY+ N E A+++ INTC++RD AE
Sbjct: 18 SNTANTKKLYIESYGCQMNFSDSEIVASILAKVGYN-TTNTVEEADLVLINTCSVRDKAE 76
Query: 131 HKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCG 190
+ +RL F KR+ K K+ VLGCMAER+K L+ +K+VD+V G
Sbjct: 77 QTIRKRLEQFNVYKRK------------KPAMKVGVLGCMAERVKHAFLEEEKIVDMVVG 124
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
PDAY+DLP LLE+V+ G++ +N +LS +ETYADI+P+R++ N VTAFVS+ RGC+NMC+F
Sbjct: 125 PDAYKDLPNLLEDVEEGREAVNVILSKDETYADIAPIRLNSNGVTAFVSITRGCDNMCTF 184
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRGRERSR SI++E+ +L G KEVTLLGQNV+SY G++K+
Sbjct: 185 CIVPFTRGRERSRDPYSILEEIADLQARGFKEVTLLGQNVDSYLWYGGGLKKDFSKATEM 244
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
+ + N FA LLD ++ +P+MR R+++ +P+D +++ M N+C
Sbjct: 245 QQATAIN-----------FAKLLDMVATAYPKMRIRFSTSNPQDMTLDVIDTMAQHHNIC 293
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
KYIHLP Q+G++ +L+ M R +TRE Y L+ IR+ IPD +S D I GF ETE +H
Sbjct: 294 KYIHLPVQSGSNRILKAMNRLHTREEYFTLIDSIRERIPDCAISQDMITGFPTETEADHQ 353
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
DTL+LM+ V YD +MFAYS R T A R DDVPEEVK+RRL E+I+ ++ +
Sbjct: 354 DTLSLMEYVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLAEIIDLQQKHSLYRTQ 413
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+Q+G VL+EG +KK+ D E +G++ + V F
Sbjct: 414 AQLGNTVEVLIEGNSKKS-DKEWMGRNTQNTVVVF 447
>gi|374373493|ref|ZP_09631153.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Niabella soli DSM 19437]
gi|373234466|gb|EHP54259.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Niabella soli DSM 19437]
Length = 476
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/451 (46%), Positives = 293/451 (64%), Gaps = 38/451 (8%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q + Y E+YGC MN D E+V +I+ G+ N+ E A++IFINTC+IR+ AE V +
Sbjct: 30 QKQFYIESYGCAMNFADSEVVAAILNKEGFGATRNM-EEADLIFINTCSIREKAEQTVRK 88
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
RL F LK E K + G VLGCMAERLK K L+ +K+VD+V GPDAYR
Sbjct: 89 RLTDFKKLKAE-KPGMLVG-----------VLGCMAERLKSKFLEEEKLVDIVVGPDAYR 136
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LPRL++E GQK +N LLS EETYADI+PVR++ N V+AFVS+MRGCNNMCSFC+VPF
Sbjct: 137 SLPRLVDEASSGQKTVNVLLSREETYADIAPVRLNSNGVSAFVSIMRGCNNMCSFCVVPF 196
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN--DTSGMEKEVEPGANWRLSE 313
TRGRERSR SI+ E +L+++G +EVTLLGQNV+SY+ +G E++
Sbjct: 197 TRGRERSRDAVSIIAECTDLFEKGYREVTLLGQNVDSYHYIPENGTEQD----------- 245
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
+ FA+LL++++L P++R R+++ HPKD D++L+ M N+CK IH
Sbjct: 246 -----------AVSFANLLEKVALISPDLRVRFSTSHPKDITDDVLHTMAAYENICKCIH 294
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G++ VL+ M R YTRE Y V +IR+++P +++D I GFC E E +H +TL+
Sbjct: 295 LPVQSGSTRVLQLMNRTYTREWYKGKVDRIRELLPGCSITADIIAGFCSEEETDHQETLS 354
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+M+ YD++YMF YS R T A R Y DDVP EVK+RRL E+IE + + Y +G
Sbjct: 355 IMEYSRYDLSYMFFYSERPGTLAQRRYKDDVPLEVKKRRLQEVIETQNRLSLENYTKDIG 414
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL++G +K++ + + VG++ + V F
Sbjct: 415 QTYKVLIDGDSKRSAE-DWVGRTSQNKVVIF 444
>gi|354604519|ref|ZP_09022508.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Alistipes indistinctus
YIT 12060]
gi|353347098|gb|EHB91374.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Alistipes indistinctus
YIT 12060]
Length = 457
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/448 (46%), Positives = 291/448 (64%), Gaps = 40/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMN D E+VLSI++ G+ + P A+VI INTC+IRD AE ++W RL
Sbjct: 20 KLYIETYGCQMNAGDSEVVLSILQGDGFRYTED-PAGADVILINTCSIRDNAEQRIWGRL 78
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
R++KK K+ +V V+GCMAERL++K++D +++V++V GPDAYRD
Sbjct: 79 REL----RQYKK---------KNKGLLVGVIGCMAERLREKLIDQEELVNLVAGPDAYRD 125
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LPRLL E G K +N LLS EETYA+ISPVR+ KN V+A++S+MRGCNNMCS+C+VP+T
Sbjct: 126 LPRLLREAGGGAKAVNVLLSGEETYAEISPVRLDKNGVSAYISIMRGCNNMCSYCVVPYT 185
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG ERSR ++I++E EL+ G +EVTLLGQNVNSY W+ E
Sbjct: 186 RGAERSRDPQTILREARELFDGGYREVTLLGQNVNSY--------------RWKNGETVA 231
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FADLL ++ P++R R+++ HPKD DE+L+ M PN+C+ IHLPA
Sbjct: 232 G----------FADLLGAVASVDPKLRVRFSTSHPKDLSDEVLHTMARYPNLCRAIHLPA 281
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +LE M R YTRE YL ++ IR+I+P +S+D I GFC ET+++H TL+LM+
Sbjct: 282 QSGSTRMLELMNRKYTREWYLGRIEAIRRILPGCSISTDLIAGFCTETDDDHRQTLSLME 341
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGY A+MF YS R T A R+ DDVP+ VK RL E+I E + + VG
Sbjct: 342 EVGYASAFMFKYSERPNTKAARHMADDVPDGVKTARLNEIIALQNELSLRSNRLDVGREF 401
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ D +L G++ + V F
Sbjct: 402 EVLVEGVSKRS-DRQLFGRTSQNKVVVF 428
>gi|372222029|ref|ZP_09500450.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Mesoflavibacter zeaxanthinifaciens S86]
Length = 486
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/448 (45%), Positives = 294/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ G++ + E A+++ +NTC+IR+ AE V +RL
Sbjct: 30 KLYIESYGCQMNFSDSEIVASILAKEGFNTTQELAE-ADLVLVNTCSIREKAEQTVRKRL 88
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F +KR V G K+ VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 89 EKFNAVKR-----VNPGM-------KVGVLGCMAERLKSKFLEEEKIVDMVVGPDAYKDL 136
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L++E+D G+ +N +LS +ETY D++PVR++ N VTAFVS+ RGC+NMC+FC+VPFTR
Sbjct: 137 PNLIQEIDEGRNAVNVILSKDETYGDVAPVRLNSNGVTAFVSITRGCDNMCTFCVVPFTR 196
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI++EV++LW +G KE+TLLGQNV+SY G++K+ E + +
Sbjct: 197 GRERSRNPQSILEEVNDLWNKGFKEITLLGQNVDSYLWYGGGLKKDFEKATDMQ------ 250
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K + FA LL+ ++ P+MR R+++ +P+D +++ M N+CKYIHLP
Sbjct: 251 -----KATSVNFAKLLEMVATAQPKMRIRFSTSNPQDMTLDVIDTMAKFENICKYIHLPV 305
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TR+ Y L+ I+ IPD +S D I GF ETEE+H DTL+LM+
Sbjct: 306 QSGSDRILKEMNRLHTRQEYFTLIDNIKARIPDCAISQDMITGFPTETEEDHQDTLSLME 365
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DD+PE++K+RRLTE+I +E VG V+
Sbjct: 366 YVKYDFGFMFAYSERPGTLAARKLEDDIPEDIKKRRLTEIINLQQEHALYRTQQHVGKVE 425
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D +G++ + V F
Sbjct: 426 EVLIEGTSKKS-DAHWMGRNTQNTVVVF 452
>gi|170592325|ref|XP_001900919.1| CDK5RAP1-like protein [Brugia malayi]
gi|158591614|gb|EDP30219.1| CDK5RAP1-like protein, putative [Brugia malayi]
Length = 453
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/436 (49%), Positives = 294/436 (67%), Gaps = 39/436 (8%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MNVND+E+V S++ ++GY E +V E A++I + TC+IR+ AE+KVW L ++R
Sbjct: 1 MNVNDVELVRSLLLSSGYVETDDVKE-ADIILLMTCSIREGAENKVWDELKVLRKIRR-- 57
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
KK V + VLGCMAER++ +L + VDVV GPD+YRDLPRLL G
Sbjct: 58 KKGV------------VGVLGCMAERVRHNLLTCTENVDVVAGPDSYRDLPRLLAIARCG 105
Query: 208 QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVES 267
IN LS+EETYAD+ PVR K S TA+VS+MRGC+NMC++CIVP+TRGRERSRP+ S
Sbjct: 106 SMAINVQLSVEETYADVVPVRKDKFSKTAYVSIMRGCDNMCTYCIVPYTRGRERSRPMNS 165
Query: 268 IVKEVDELWKEGVKEVTLLGQNVNSYNDTSGME----KEVEPGANWRLSEGFNSMCKVKK 323
I+ E+ L EGVK+VTLLGQNVNSY D S + EPG ++ GF + K K+
Sbjct: 166 ILDEIRRLSDEGVKQVTLLGQNVNSYRDLSEISFLSANLAEPG----VAPGFRTKYKPKR 221
Query: 324 MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAV 383
G F LLD++S EMR R+TSPHPKDFP E++ ++++R N+CK IHLPAQ+G++ V
Sbjct: 222 GGYXFLTLLDKVSQIDSEMRIRFTSPHPKDFPLEVIQLIKERSNICKQIHLPAQSGSNIV 281
Query: 384 LERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMA 443
L+ M RGY+RE+YL+LV +I+ ++P+V L+SDFI GFCGETE+ H ++L L+K
Sbjct: 282 LDAMDRGYSRESYLELVHRIKTVLPNVSLTSDFIAGFCGETEDCHRESLDLIK------- 334
Query: 444 YMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGP 503
+T A+R+ DDVP+EVK RR EL AFRE+ + +S +GT QLVL+E
Sbjct: 335 --------HKTKAYRHLRDDVPKEVKNRRHQELAGAFRETALKHNESLLGTKQLVLLEET 386
Query: 504 NKKAPDTELVGKSDRG 519
+K++ + L G++D G
Sbjct: 387 SKRSSE-HLRGRTDGG 401
>gi|88801432|ref|ZP_01116960.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polaribacter irgensii
23-P]
gi|88782090|gb|EAR13267.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polaribacter irgensii
23-P]
Length = 484
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 293/443 (66%), Gaps = 25/443 (5%)
Query: 68 ATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRD 127
T +++ + +++ E+YGCQMN+ND EIV +I+ GY+ + E A+++ +NTC+IR+
Sbjct: 18 VTENKIENTKKLFIESYGCQMNMNDSEIVAAILDKEGYN-TTQILEEADLVLVNTCSIRE 76
Query: 128 YAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDV 187
AE V +RL + +K+ K K+ VLGCMAERLK+K L+ +K+VD+
Sbjct: 77 KAETSVRKRLQKYNAVKKINPK------------MKVGVLGCMAERLKEKFLEEEKIVDL 124
Query: 188 VCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 247
V GPDAY+DLP LL EV G+ +N +LS +ETY DISPVR++ N VTAFVS+ RGC+NM
Sbjct: 125 VVGPDAYKDLPNLLSEVSEGRSAVNVILSKDETYGDISPVRLNTNGVTAFVSITRGCDNM 184
Query: 248 CSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPG 306
C+FC+VPFTRGRERSR +SI++E+ + + KE+TLLGQNV+S+ G++K+ +
Sbjct: 185 CTFCVVPFTRGRERSRDPKSILEEIQSMVDQNFKEITLLGQNVDSFLWFGGGLKKDFKKA 244
Query: 307 ANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRP 366
M + +G FA+LLD + +FP+ RFR+++ +P+D +++++M
Sbjct: 245 T---------EMARATAIG--FAELLDMCATKFPKTRFRFSTSNPQDMSLDVIHVMAKHI 293
Query: 367 NVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEE 426
N+CKY+HLP Q+G++A+L+ M R +TRE Y+ LV I +IIP++ LS D I GFCGETEE
Sbjct: 294 NICKYLHLPVQSGSNAMLKAMNRQHTREEYMTLVDNIFKIIPEMSLSQDMIVGFCGETEE 353
Query: 427 EHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQ 486
+H DTL LM+ V YD +MF YS R T A DDVP+ VK+RRL E+I+ +E
Sbjct: 354 DHQDTLALMQYVKYDFGFMFTYSERPGTLAGNKMDDDVPQPVKKRRLQEIIDLQQEHALF 413
Query: 487 CYDSQVGTVQLVLVEGPNKKAPD 509
+G ++ L+EG +KK PD
Sbjct: 414 RTQQHLGKIEEFLIEGTSKKNPD 436
>gi|198274122|ref|ZP_03206654.1| hypothetical protein BACPLE_00259 [Bacteroides plebeius DSM 17135]
gi|198273200|gb|EDY97469.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides plebeius DSM
17135]
Length = 457
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/465 (46%), Positives = 295/465 (63%), Gaps = 42/465 (9%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
A ++ SAT H +++ ETYGCQMNV D E++ SIM+ AGYS + E A+ +F
Sbjct: 5 ATGADFKSATE---HENKKLFIETYGCQMNVADSEVIASIMQMAGYSPC-DTLEEADAVF 60
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
+NTC+IRD AE K+ RL +F L R+ +KN+ G VLGCMAER+K++++
Sbjct: 61 MNTCSIRDNAEQKILNRLEFFHSL-RKKRKNLIVG-----------VLGCMAERVKNELI 108
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS 239
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS
Sbjct: 109 EKHH-VDLVAGPDAYLTLPDLIAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVS 167
Query: 240 VMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGM 299
+MRGCNN C +CIVP+TRGRERSR VESI+ EV +L ++G KEVTLLGQNVNSY
Sbjct: 168 IMRGCNNFCHYCIVPYTRGRERSRDVESILNEVRDLQRKGYKEVTLLGQNVNSYR----F 223
Query: 300 EKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELL 359
EK+ + + F LL ++ P+MR R+T+ HPKD DE L
Sbjct: 224 EKDGQT--------------------VTFPMLLRIVAEAVPDMRVRFTTSHPKDMSDETL 263
Query: 360 YIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICG 419
+++ + PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+IIPD GLS+D G
Sbjct: 264 HVIAEVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSG 323
Query: 420 FCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEA 479
F ETEE+H +L+LM+ YD A+MF YS R T+A ++ DDVPEE+K RRL E+IE
Sbjct: 324 FHSETEEDHQMSLSLMRECAYDSAFMFKYSERPGTYASKHLPDDVPEEIKIRRLNEMIEL 383
Query: 480 FRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + + VG VLVEG +K++ + +L G++++ V F
Sbjct: 384 QNQLSAESNAKDVGKTFEVLVEGVSKRSKE-QLFGRTEQNKVVVF 427
>gi|375144530|ref|YP_005006971.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Niastella koreensis
GR20-10]
gi|361058576|gb|AEV97567.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Niastella koreensis
GR20-10]
Length = 494
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/452 (46%), Positives = 285/452 (63%), Gaps = 25/452 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y E+YGC MN D EIV SI+ G+ N E A++I INTC+IR+ AE V +RL
Sbjct: 32 KFYIESYGCAMNFADSEIVASILNENGFGATRNF-EEADLILINTCSIREKAEQTVRKRL 90
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
KR + I VLGCMAERLK+K+L +K+VD+V GPDAYR L
Sbjct: 91 TELRKAKRHNSGAL------------IGVLGCMAERLKEKLLQEEKLVDMVVGPDAYRSL 138
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ E GQK +N LLS +ETYADI+PVR+ N V+ FVS+MRGCNNMC+FC+VPFTR
Sbjct: 139 PGLIMEAGTGQKAVNVLLSRDETYADIAPVRLDSNGVSGFVSIMRGCNNMCAFCVVPFTR 198
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY-----NDTSGMEKEVEPGANWRLS 312
GRERSR SI++E +L+ +G +EVTLLGQNV+SY N V +
Sbjct: 199 GRERSRDPHSIIRECTDLFNQGYREVTLLGQNVDSYYWVPENSNGAQINGVSANSLPTNR 258
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
EG + + FA+LL+ ++L P +R R+++ HPKD D++L+ M N+CKYI
Sbjct: 259 EGRG------EAAVTFANLLEMVALIDPLLRIRFSTSHPKDITDDVLFTMAKYENICKYI 312
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G++ VL+ M R YTRE Y+ V +I +I+PD G+SSD I GFC ETEE+H DTL
Sbjct: 313 HLPVQSGSTRVLQLMNRTYTREWYMAKVDRIMEIMPDCGISSDIITGFCTETEEDHQDTL 372
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
++M+ YDM+YMF YS R T A R Y DDVPE+VK+RRL E+++ + + +
Sbjct: 373 SIMRHSKYDMSYMFFYSERPGTLAARRYKDDVPEDVKKRRLDEVVKLQNAMSHESNLRDL 432
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VL+EG N K D + +G+S + + F
Sbjct: 433 GKTFKVLIEG-NSKRSDQDWMGRSSQNKVIVF 463
>gi|384097850|ref|ZP_09998970.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Imtechella
halotolerans K1]
gi|383836732|gb|EID76139.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Imtechella
halotolerans K1]
Length = 481
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/454 (45%), Positives = 294/454 (64%), Gaps = 26/454 (5%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+ +Q ++Y E+YGCQMN +D EIV SI+ G++ + E A+++ +NTC+IRD AE
Sbjct: 19 KTENQRKLYIESYGCQMNFSDSEIVASILSKEGFN-TTQIMEEADLVLVNTCSIRDKAEQ 77
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGP 191
+ +RL F +KR + G K+ VLGCMAERLK K L+ +K+VD+V GP
Sbjct: 78 TIRKRLEKFNAVKR-----INPGM-------KVGVLGCMAERLKSKFLEEEKIVDMVVGP 125
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
DAY+DLP L++E+D G+ +N +LS +ETY DI+PVR++ N VTAFVS+ RGC+NMC+FC
Sbjct: 126 DAYKDLPNLIQEIDEGRNAVNVILSKDETYGDIAPVRLNSNGVTAFVSITRGCDNMCTFC 185
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
+VPFTRGRERSR +SI++E+ +L G KEVTLLGQNV+SY G L
Sbjct: 186 VVPFTRGRERSRDPQSILEEIGDLVSRGFKEVTLLGQNVDSYLWYGG-----------GL 234
Query: 312 SEGFNSMCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ F+ +++K + FA LL + FP++R R+++ +P+D +++ M N+CK
Sbjct: 235 KKDFDKATEIQKATSVNFAKLLSMTAEAFPKLRIRFSTSNPQDMTLDVIEEMAKYSNICK 294
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
YIHLP Q+G+ +L M R +TR+ Y +L+ IR+I+PD +S D I GF ETEE+H D
Sbjct: 295 YIHLPVQSGSDRILNLMNRLHTRQEYFELIDNIRRILPDCAISQDMITGFPTETEEDHQD 354
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL+LM+ V YD +MFAYS R T A R DD+PEE K+RRLTE+I +E +
Sbjct: 355 TLSLMEYVKYDFGFMFAYSERPGTLAERKMEDDIPEETKKRRLTEIINLQQEHSLFRTQQ 414
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
QVG VL+EG +KK+ D +G++ + V F
Sbjct: 415 QVGRTVEVLIEGNSKKS-DAHWMGRNTQNTVVVF 447
>gi|358341476|dbj|GAA28735.2| regulatory subunit-associated protein 1 [Clonorchis sinensis]
Length = 493
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/435 (46%), Positives = 290/435 (66%), Gaps = 45/435 (10%)
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL-- 179
TCAIR+ AE+K+W+RL+++ + ++ +++ KI VLGCMAERLK+K+L
Sbjct: 2 TCAIRESAENKIWKRLHHYRLVAKQRGRSI-----------KIGVLGCMAERLKEKLLCN 50
Query: 180 ---DADKMV-----------------DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEE 219
D + D VCGPDAYRDLPRL+ + G +G + LSLEE
Sbjct: 51 PDFSIDSLTSGAISNSEPRPSPSVGADFVCGPDAYRDLPRLIADAHAGIQGASVALSLEE 110
Query: 220 TYADISPVRI----------SKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
TYAD+ PVR +++S +AF+SVMRGC+NMC++CIVPF RGRERSRP+ SI
Sbjct: 111 TYADVRPVRRCQSSEDGLEGNQSSPSAFLSVMRGCDNMCTYCIVPFVRGRERSRPLSSIR 170
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
E +L++ GV+ +TLLGQNVNSY D S + + + L+ GF+++ + K GLRF
Sbjct: 171 DEAAQLFEAGVRNITLLGQNVNSYCDLS-VPQNRTLTSKTHLTPGFHAIYRPKLGGLRFV 229
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
DLLD +S PE+R R+TSPHPKDFP E+L ++ +R N+C ++HLPAQ+G++ VL+RM R
Sbjct: 230 DLLDEISRISPELRIRFTSPHPKDFPPEVLQLIAERQNICSHLHLPAQSGSATVLDRMGR 289
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GYT +AYL LV+ +R+ IP V ++SDFI GFCGETEE+H ++ L+K VGY + F YS
Sbjct: 290 GYTPDAYLALVETVRKTIPGVAITSDFIAGFCGETEEDHEASVQLIKDVGYSFTFCFPYS 349
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MRE+T A+ VDDVP E K RR EL A R+++ + +Q+G +QLVLVEGP++++ +
Sbjct: 350 MREKTRAYHRLVDDVPLETKNRRHLELRAAGRQASLEFNRAQIGQIQLVLVEGPSRRSFE 409
Query: 510 TELVGKSDRGHRVAF 524
++ G +D +V F
Sbjct: 410 -DVFGFNDCNVKVIF 423
>gi|86143888|ref|ZP_01062256.1| hypothetical protein MED217_03540 [Leeuwenhoekiella blandensis
MED217]
gi|85829595|gb|EAQ48058.1| hypothetical protein MED217_03540 [Leeuwenhoekiella blandensis
MED217]
Length = 481
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/449 (46%), Positives = 293/449 (65%), Gaps = 28/449 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ GY+ + E+A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLFIESYGCQMNFSDSEIVASILAKEGYNTTQQL-EDADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ +K++ +P K+ VLGCMAERLK K L+ +K+VD+V GPDAY+D
Sbjct: 84 EKYNAVKKD-------------NPTMKVGVLGCMAERLKSKFLEEEKIVDLVVGPDAYKD 130
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP LL EV+ G+ IN +LS EETY DI+PVR+ N VTAFVS+ RGC+NMC+FC+VPFT
Sbjct: 131 LPNLLGEVEEGRDAINVILSKEETYGDIAPVRLQSNGVTAFVSITRGCDNMCTFCVVPFT 190
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGF 315
RGRERSR +SIV+EV++L +G KEVTLLGQNV+SY G++K+ E ++
Sbjct: 191 RGRERSRDPQSIVEEVNDLAAKGFKEVTLLGQNVDSYLWYGGGLKKDFEKASDM------ 244
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K + FA LL ++ P+MR R+++ +P+D +++ M PN+CKYIHLP
Sbjct: 245 -----AKATAVNFAGLLSLVAEAQPKMRIRFSTSNPQDMTLDVIRTMAKYPNICKYIHLP 299
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+ +L+ M R +TR+ Y +L+ IR+I+PD +S D I GF ETEE+H DTL+LM
Sbjct: 300 VQSGSDRILKEMNRLHTRQEYFELIDNIREIMPDCAISQDMITGFPTETEEDHQDTLSLM 359
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V YD +MFAYS R T A R DD+P +VK+RRL E+I +E + QVG
Sbjct: 360 EYVKYDFGFMFAYSERPGTLAARKLEDDIPLDVKKRRLAEVIALQQEHSLYNTQKQVGKT 419
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK+ D E G++ + V F
Sbjct: 420 VEVLIEKASKKS-DAEWAGRNSQNTVVVF 447
>gi|42525237|gb|AAS18318.1| CDK5 regulatory subunit associated protein 1 transcript variant 4
[Homo sapiens]
Length = 426
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/383 (53%), Positives = 267/383 (69%), Gaps = 19/383 (4%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V +L ++G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA L
Sbjct: 286 VKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGFTTNYKTKQGGLRFAHL 343
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
LD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY
Sbjct: 344 LDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGY 403
Query: 392 TREAYLDLVQKIRQIIP-DVGLS 413
+REAY++LV IR+ IP D G+S
Sbjct: 404 SREAYVELVHHIRESIPEDTGIS 426
>gi|189460206|ref|ZP_03008991.1| hypothetical protein BACCOP_00843 [Bacteroides coprocola DSM 17136]
gi|189433067|gb|EDV02052.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides coprocola DSM
17136]
Length = 457
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/465 (46%), Positives = 298/465 (64%), Gaps = 42/465 (9%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
A ++ SAT E +++ ETYGCQMNV D E++ SIM+ AGYS ++ E A+ +F
Sbjct: 5 ATGADFKSATELETK---KLFIETYGCQMNVADSEVIASIMQMAGYSPCESLDE-ADAVF 60
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
+NTC+IRD AE K+ RL +F L+++ +K++ G VLGCMAER+K+ ++
Sbjct: 61 MNTCSIRDNAEQKILNRLEFFHSLRKK-RKHLIVG-----------VLGCMAERVKNDLI 108
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS 239
+ + VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS
Sbjct: 109 E-NHHVDLVAGPDAYLTLPDLIGAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVS 167
Query: 240 VMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGM 299
+MRGCNN C +CIVP+TRGRERSR VESI+ EV +L ++G KEVTLLGQNVNSY
Sbjct: 168 IMRGCNNFCHYCIVPYTRGRERSRDVESILNEVHDLQQKGYKEVTLLGQNVNSYR----F 223
Query: 300 EKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELL 359
E+E E + F LL ++ PEMR R+T+ HPKD DE L
Sbjct: 224 EREGEV--------------------VTFPMLLRIVAEAVPEMRVRFTTSHPKDMSDETL 263
Query: 360 YIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICG 419
Y++ + PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V+ IR+IIPD GLS+D G
Sbjct: 264 YVIAEVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVEAIRRIIPDCGLSTDIFSG 323
Query: 420 FCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEA 479
F ETEE+H +L+LM+ YD A+MF YS R T+A ++ DDVPEEVK RRL E+IE
Sbjct: 324 FHSETEEDHQMSLSLMRECAYDSAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEMIEL 383
Query: 480 FRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + + VG VLVEG +K++ + +L G++++ V F
Sbjct: 384 QNQLSAESNARNVGKTFEVLVEGISKRSKE-QLFGRTEQNKVVVF 427
>gi|379730614|ref|YP_005322810.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Saprospira
grandis str. Lewin]
gi|378576225|gb|AFC25226.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Saprospira
grandis str. Lewin]
Length = 483
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/448 (46%), Positives = 287/448 (64%), Gaps = 38/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R Y E+YGCQMN +D EIV SI++ AGY+ + A++I +NTC+IR+ AE V +RL
Sbjct: 39 RFYIESYGCQMNFSDSEIVASILQEAGYAST-KYMDAADLILVNTCSIREKAEDTVRKRL 97
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
F LK+E P +V VLGCMAERLK K+LD +K+VD+V GPDAYRD
Sbjct: 98 RIFDKLKKE-------------RPGLLVGVLGCMAERLKAKLLDEEKLVDLVLGPDAYRD 144
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+ + G KGIN LS EETYADISPVR+S + VTAFV++MRGC+NMCSFC+VPFT
Sbjct: 145 LPNLIATAEDGDKGINVFLSREETYADISPVRLSDSGVTAFVTIMRGCDNMCSFCVVPFT 204
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SI+ E +L+ G +EVTLLGQNV+SY +W EG
Sbjct: 205 RGRERSRDPYSILAECQDLFDRGFREVTLLGQNVDSY--------------HWEHPEGLE 250
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ FADLL++ +L P++R R+++ HPKD D++L M N+C+YIH P
Sbjct: 251 Q--------VDFADLLEKTALIHPDLRIRFSTSHPKDITDKVLINMGKYENICEYIHFPV 302
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L++M R Y RE Y++ + +I +++P+ +SSD I GFC ETEE+H DTL++++
Sbjct: 303 QSGSSRILKKMNRTYDREWYMNKIDRIYELLPNCAVSSDVIAGFCTETEEDHQDTLSIIE 362
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
Y M+YMF YS R T A R Y DDVP EVK+RRL E+I + + +G
Sbjct: 363 HSQYSMSYMFFYSERPGTLAARKYEDDVPLEVKKRRLQEIIRLQNQISFAHNKKDIGKTF 422
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +K++ D + G++ + + F
Sbjct: 423 KVLIEKVSKRSED-DFAGRNSQNKMIVF 449
>gi|319640044|ref|ZP_07994771.1| hypothetical protein HMPREF9011_00368 [Bacteroides sp. 3_1_40A]
gi|345517058|ref|ZP_08796536.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Bacteroides
sp. 4_3_47FAA]
gi|254833830|gb|EET14139.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Bacteroides
sp. 4_3_47FAA]
gi|317388322|gb|EFV69174.1| hypothetical protein HMPREF9011_00368 [Bacteroides sp. 3_1_40A]
Length = 456
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/463 (46%), Positives = 291/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT SE +++ ETYGCQMNV D E+V SIM+ AGY V + A+ +F+N
Sbjct: 6 GADFKSATDSE---NKKLFIETYGCQMNVADSEVVASIMQMAGY-HVCETLDEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K+ ++N+ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKNKRRNLIVG-----------VLGCMAERVKDDLIE- 109
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY ++ P RI N ++ FVS+M
Sbjct: 110 NHHVDLVVGPDAYLTLPDLVASVEAGEKAINVELSTTETYREVIPSRICGNHISGFVSIM 169
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C +CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 170 RGCNNFCHYCIVPYTRGRERSRDVESILNEVRDLADKGYKEVTLLGQNVNSYR----FEK 225
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E E + F LL ++ P+MR R+T+ HPKD DE L +
Sbjct: 226 EGEI--------------------ITFPMLLRTVAEAVPDMRVRFTTSHPKDMSDETLQV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ + PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+IIPD GLS+D G+
Sbjct: 266 IAETPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSGYH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+ YD A+MF YS R T+A ++ DDVPEEVK RRL E+IE
Sbjct: 326 SETEEDHQESLSLMRECAYDSAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIELQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG V+VEG +K++ + +L G++ + V F
Sbjct: 386 RLSAESNARDVGKTFEVMVEGVSKRSRE-QLFGRTQQNKVVVF 427
>gi|325285677|ref|YP_004261467.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Cellulophaga lytica DSM 7489]
gi|324321131|gb|ADY28596.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Cellulophaga lytica DSM 7489]
Length = 480
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 295/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGC MN +D EIV SI+ G++ V E+A+++ +NTC+IR+ AE + +RL
Sbjct: 27 KLYIESYGCAMNFSDSEIVASILSEEGFN-TTKVLEDADLVLVNTCSIREKAELTIRKRL 85
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F +KR +K K+ VLGCMAERLK + L+ +K+VD+V GPDAY+DL
Sbjct: 86 EKFNAVKR------------TKPHLKVGVLGCMAERLKSQFLEEEKIVDMVVGPDAYKDL 133
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L++EVD G+ IN +LS EETY D++PVR++ N ++A+VS+ RGC+NMC+FC+VPFTR
Sbjct: 134 PNLIKEVDEGRNAINVILSKEETYGDVAPVRLNTNGISAYVSITRGCDNMCTFCVVPFTR 193
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI++EV++LW G KE+TLLGQNV+SY G L + FN
Sbjct: 194 GRERSREPQSILEEVNDLWNRGYKEITLLGQNVDSYLWYGG-----------GLKKDFNQ 242
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + FA+LL+ ++ P+MR R+++ +P+D +++ M N+CK+IHLP
Sbjct: 243 ATEMQKATAVNFANLLEMTAIAQPKMRIRFSTSNPQDLTLDVVKTMAKYDNICKHIHLPV 302
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TRE Y L+ IRQIIPD +S D I GF ETEE+H DTL+L++
Sbjct: 303 QSGSDRILKAMNRLHTREEYFTLIDNIRQIIPDCAISQDMIAGFPTETEEDHKDTLSLLE 362
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YM++YS R T A R DDVPE K+RRL E+I R+ +G ++G +
Sbjct: 363 YVKYDFGYMYSYSERPGTMAARKLEDDVPEADKKRRLAEIIALQRQHSGYRLQQRLGKID 422
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +K++ + +G++ + V F
Sbjct: 423 EVLIEGESKRSTE-HWMGRNSQNAVVVF 449
>gi|170072335|ref|XP_001870154.1| CDK5 regulatory subunit-associated protein 1 [Culex
quinquefasciatus]
gi|167868595|gb|EDS31978.1| CDK5 regulatory subunit-associated protein 1 [Culex
quinquefasciatus]
Length = 446
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/430 (48%), Positives = 280/430 (65%), Gaps = 55/430 (12%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN ND EIV SI+K Y ++ ++A+V+ + TCAIRD AE VW RL + +K
Sbjct: 1 MNTNDTEIVWSILKGHEYQRTGSI-KDADVVLLMTCAIRDGAESTVWNRLKHVRLMK--- 56
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
++ + GR+ G
Sbjct: 57 ERRESEGRALQ------------------------------------------------G 68
Query: 208 QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVES 267
QK IN LLSL+ETYAD+ PV++ + S TA+VS+MRGC+NMCS+CIVPFTRG+ERSRPV S
Sbjct: 69 QKAINVLLSLDETYADVMPVKLDRKSRTAYVSIMRGCDNMCSYCIVPFTRGKERSRPVAS 128
Query: 268 IVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLR 327
I +E L +G+KE+TLLGQNVNSY D S E + E A+ L+ GF ++ K K G R
Sbjct: 129 IREEALHLEAKGIKEITLLGQNVNSYRDLS-TESDGEKQASV-LAPGFKTVYKTKVGGRR 186
Query: 328 FADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERM 387
FA+LL L+ PEMR R+TSPHPKDFP E+L + PN+CK +HLPAQ+G+S VLERM
Sbjct: 187 FAELLTELAETVPEMRIRFTSPHPKDFPREVLETIARYPNICKNLHLPAQSGSSTVLERM 246
Query: 388 RRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFA 447
RRGY+REAYL+LV ++R I+P+V LSSDFICGFCGE++ E +TL+L++ VGY A++FA
Sbjct: 247 RRGYSREAYLNLVDEVRTIVPNVTLSSDFICGFCGESDAEFTETLSLIEQVGYHTAFLFA 306
Query: 448 YSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKA 507
YSMRE+T AHR + DDVP+ VKQ+RL ++I+ FR + VG +L+LVEG +K++
Sbjct: 307 YSMREKTTAHRRFSDDVPDSVKQQRLRDMIKVFRVGAERLNAQFVGREELILVEGASKRS 366
Query: 508 PDTELVGKSD 517
P+ +L G++D
Sbjct: 367 PN-DLAGRND 375
>gi|329956412|ref|ZP_08297009.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides clarus YIT
12056]
gi|328524309|gb|EGF51379.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides clarus YIT
12056]
Length = 455
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/463 (47%), Positives = 292/463 (63%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT E +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADE---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ KKN+ G VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKK-KKNLIVG-----------VLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPDLIAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
A+ + + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 -----ADGEV--------------ITFPALLRTVAESAPGVRIRFTTSHPKDMSDETLQV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ + PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+IIPD GLS+D GF
Sbjct: 266 IAEVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVDAIRRIIPDCGLSTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R T+A ++ DDVPEEVK RRL E+I
Sbjct: 326 SETEEDHRLSLSLMEECGYDAAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAEANARCVGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|237709181|ref|ZP_04539662.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265752708|ref|ZP_06088277.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp.
3_1_33FAA]
gi|345514229|ref|ZP_08793742.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Bacteroides
dorei 5_1_36/D4]
gi|423230601|ref|ZP_17217005.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides dorei CL02T00C15]
gi|423244310|ref|ZP_17225385.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides dorei CL02T12C06]
gi|229437210|gb|EEO47287.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Bacteroides
dorei 5_1_36/D4]
gi|229456877|gb|EEO62598.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263235894|gb|EEZ21389.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp.
3_1_33FAA]
gi|392630745|gb|EIY24731.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides dorei CL02T00C15]
gi|392642491|gb|EIY36257.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides dorei CL02T12C06]
Length = 456
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/463 (46%), Positives = 291/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT SE +++ ETYGCQMNV D E++ SIM+ AGY V + A+ +F+N
Sbjct: 6 GADFKSATDSE---NKKLFIETYGCQMNVADSEVIASIMQMAGY-HVCETLDEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K+ ++N+ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKNKRRNLIVG-----------VLGCMAERVKDDLIE- 109
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY ++ P RI N ++ FVS+M
Sbjct: 110 NHHVDLVVGPDAYLTLPDLVASVEAGEKAINVELSTTETYREVIPSRICGNHISGFVSIM 169
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C +CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 170 RGCNNFCHYCIVPYTRGRERSRDVESILNEVRDLAAKGYKEVTLLGQNVNSYR----FEK 225
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E E + F LL ++ P+MR R+T+ HPKD DE L +
Sbjct: 226 EGEI--------------------ITFPMLLRTVAEAVPDMRVRFTTSHPKDMSDETLQV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ + PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+IIPD GLS+D G+
Sbjct: 266 IAETPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSGYH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+ YD A+MF YS R T+A ++ DDVPEEVK RRL E+IE
Sbjct: 326 SETEEDHQESLSLMRECAYDSAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIELQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG V+VEG +K++ + +L G++ + V F
Sbjct: 386 RLSAESNARDVGKTFEVMVEGVSKRSRE-QLFGRTQQNKVVVF 427
>gi|212692499|ref|ZP_03300627.1| hypothetical protein BACDOR_01995 [Bacteroides dorei DSM 17855]
gi|423240772|ref|ZP_17221886.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides dorei CL03T12C01]
gi|212664974|gb|EEB25546.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides dorei DSM
17855]
gi|392643734|gb|EIY37483.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides dorei CL03T12C01]
Length = 456
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/463 (46%), Positives = 291/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT SE +++ ETYGCQMNV D E++ SIM+ AGY V + A+ +F+N
Sbjct: 6 GADFKSATDSE---NKKLFIETYGCQMNVADSEVIASIMQMAGY-HVCETLDEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K+ ++N+ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKNKRRNLIVG-----------VLGCMAERVKDDLIE- 109
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY ++ P RI N ++ FVS+M
Sbjct: 110 NHHVDLVVGPDAYLTLPDLVASVEAGEKAINVELSTTETYREVIPSRICGNHISGFVSIM 169
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C +CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 170 RGCNNFCHYCIVPYTRGRERSRDVESILNEVRDLAAKGYKEVTLLGQNVNSYR----FEK 225
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E E + F LL ++ P+MR R+T+ HPKD DE L +
Sbjct: 226 EGEI--------------------ITFPMLLRTVAEAVPDMRVRFTTSHPKDMSDETLQV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ + PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+IIPD GLS+D G+
Sbjct: 266 IVETPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSGYH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+ YD A+MF YS R T+A ++ DDVPEEVK RRL E+IE
Sbjct: 326 SETEEDHQESLSLMRECAYDSAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIELQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG V+VEG +K++ + +L G++ + V F
Sbjct: 386 RLSAESNARDVGKTFEVMVEGVSKRSRE-QLFGRTQQNKVVVF 427
>gi|150003734|ref|YP_001298478.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacteroides
vulgatus ATCC 8482]
gi|294777449|ref|ZP_06742900.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides vulgatus
PC510]
gi|423313126|ref|ZP_17291062.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides vulgatus CL09T03C04]
gi|229890425|sp|A6KZJ2.1|MIAB_BACV8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|149932158|gb|ABR38856.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|294448517|gb|EFG17066.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides vulgatus
PC510]
gi|392686340|gb|EIY79646.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides vulgatus CL09T03C04]
Length = 456
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/463 (46%), Positives = 291/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT SE +++ ETYGCQMNV D E++ SIM+ AGY V + A+ +F+N
Sbjct: 6 GADFKSATDSE---NKKLFIETYGCQMNVADSEVIASIMQMAGY-HVCETLDEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K+ ++N+ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKNKRRNLIVG-----------VLGCMAERVKDDLIE- 109
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY ++ P RI N ++ FVS+M
Sbjct: 110 NHHVDLVVGPDAYLTLPDLVASVEAGEKAINVELSTTETYREVIPSRICGNHISGFVSIM 169
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C +CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 170 RGCNNFCHYCIVPYTRGRERSRDVESILNEVRDLADKGYKEVTLLGQNVNSYR----FEK 225
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E E + F LL ++ P+MR R+T+ HPKD DE L +
Sbjct: 226 EGEI--------------------ITFPMLLRTVAEAVPDMRVRFTTSHPKDMSDETLQV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ + PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+IIPD GLS+D G+
Sbjct: 266 IAETPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSGYH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+ YD A+MF YS R T+A ++ DDVPEEVK RRL E+IE
Sbjct: 326 SETEEDHQESLSLMRECAYDSAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIELQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG V+VEG +K++ + +L G++ + V F
Sbjct: 386 RLSAESNARDVGKTFEVMVEGVSKRSRE-QLFGRTQQNKVVVF 427
>gi|409099508|ref|ZP_11219532.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pedobacter
agri PB92]
Length = 471
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 284/448 (63%), Gaps = 38/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGC MN D EIV SI+ G+ E A+VIFINTC+IR+ AE +V RL
Sbjct: 32 KLYIESYGCAMNFADSEIVASILSETGF-ETTGDYHQADVIFINTCSIRENAETRVRNRL 90
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ F KR ++P IV VLGCMAERLK K L+ +++VDVV GPDAYRD
Sbjct: 91 SQFGVEKR-------------RNPKLIVGVLGCMAERLKSKFLEEERLVDVVVGPDAYRD 137
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+E+V+ G K +N LLS EETYADISPVR++ N +TAF+S+ RGCNNMCSFC+VPFT
Sbjct: 138 LPNLIEQVESGHKAVNVLLSREETYADISPVRLNSNGITAFISITRGCNNMCSFCVVPFT 197
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SI++E L++ G +EVTLLGQNV+SY W +G
Sbjct: 198 RGRERSRDAHSIIEEAKTLFEAGYREVTLLGQNVDSY--------------TWTSEDGTE 243
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ + FA LL++ +L P++R R+++ HPKD DE+L+ + N+C YIHLP
Sbjct: 244 T--------VNFAQLLEQTALVNPDLRVRFSTSHPKDITDEVLHTIAKYDNICNYIHLPV 295
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+GN+ VLE M R YTRE Y++ + IR IIP +S+D I GFC ETEEEH +TL++M
Sbjct: 296 QSGNTRVLELMNRTYTREWYINRIDAIRNIIPGCAISTDIIAGFCTETEEEHEETLSMMD 355
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD AY F YS R T A R DD+PE+VK+RRL E++ + + VG
Sbjct: 356 YVKYDFAYNFTYSERPGTLAARKLADDIPEDVKKRRLAEILAKQQAHSLMRLQEWVGKTV 415
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D + G+ D G F
Sbjct: 416 RVLIEGTSKKS-DLDYCGRGDSGAMAIF 442
>gi|429741802|ref|ZP_19275452.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Porphyromonas catoniae
F0037]
gi|429158050|gb|EKY00617.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Porphyromonas catoniae
F0037]
Length = 465
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/462 (44%), Positives = 295/462 (63%), Gaps = 38/462 (8%)
Query: 63 SEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINT 122
+E + + + S+ R+Y ETYGCQMNV D E+V SIM+ GY + PE A+ + INT
Sbjct: 4 NETADSKSASSLSEKRVYIETYGCQMNVADSEVVASIMQMDGY-HLTEDPELADAVLINT 62
Query: 123 CAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDAD 182
C++RD AE KV R+ Y+ ++++ K+++ G VLGCMAER K ++++
Sbjct: 63 CSVRDNAEQKVLNRIEYYHSIRKKRKRSLTIG-----------VLGCMAERAKGELIEKH 111
Query: 183 KMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMR 242
VD+V GPD+Y DLP L+ V+ G+K IN LS ETY D+ P+++S ++ FVS+MR
Sbjct: 112 H-VDLVVGPDSYLDLPNLVGAVERGEKAINVELSTSETYKDVMPLKMSGVHISGFVSIMR 170
Query: 243 GCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKE 302
GCNN CS+CIVP+TRGRERSR +ESI++EV +L +G +EVTLLGQNVNSY G +
Sbjct: 171 GCNNFCSYCIVPYTRGRERSRELESIIREVTDLASKGYREVTLLGQNVNSYRFVDGDQV- 229
Query: 303 VEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIM 362
FADLL+ ++L P MR R+TSPHPKD D+ + M
Sbjct: 230 -----------------------YDFADLLEAVALAVPGMRIRFTSPHPKDMDDKAIRTM 266
Query: 363 RDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCG 422
PN+CK+IHLPAQ+GN+ +L+ M+R YTRE YL+ V IR ++PD ++SD CGF
Sbjct: 267 AKYPNICKHIHLPAQSGNNRILKLMKRNYTREWYLERVAAIRAVMPDCAITSDLFCGFHD 326
Query: 423 ETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRE 482
E+EE+ +TL+LM+ VGY+ ++MF YS R T+A + D+VPEEVK RRL E+I+ +
Sbjct: 327 ESEEDFQETLSLMREVGYEASFMFKYSERPGTYAAKYLEDNVPEEVKIRRLQEMIDLQSQ 386
Query: 483 STGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG V VL+EG +K++ + +L G++ + V F
Sbjct: 387 LSLESNLRDVGHVVEVLIEGFSKRSRE-QLFGRTQQNKVVVF 427
>gi|313205436|ref|YP_004044093.1| tRNA-i(6)a37 thiotransferase enzyme miab [Paludibacter
propionicigenes WB4]
gi|312444752|gb|ADQ81108.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paludibacter
propionicigenes WB4]
Length = 456
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/460 (45%), Positives = 294/460 (63%), Gaps = 40/460 (8%)
Query: 65 VSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCA 124
V+S + +++ ETYGCQMNV D E+V SIM+ G++ + E A+ IF+NTC+
Sbjct: 8 VTSTDFKSALNDKKLFIETYGCQMNVADSEVVASIMQMDGFALTDKITE-ADAIFVNTCS 66
Query: 125 IRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKM 184
IRD AE +V RL YF LKR+ KK + + V+GCMAER+KD++++ +
Sbjct: 67 IRDNAEQRVINRLKYFETLKRKNKKLI------------VGVVGCMAERVKDELIN-EYG 113
Query: 185 VDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGC 244
V++V GPDAY D+P L+ V+ G K IN LS ETY+D+ P RISK S++ F+S+MRGC
Sbjct: 114 VNIVVGPDAYMDIPNLIGSVEQGNKAINVDLSTTETYSDVLPTRISK-SISGFISIMRGC 172
Query: 245 NNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVE 304
NN CS+CIVP+TRGRERSR VESI+ E+ +L + KEVTLLGQNVNSY MEK+ E
Sbjct: 173 NNFCSYCIVPYTRGRERSRDVESILTELKDLQAKNYKEVTLLGQNVNSYR----MEKDGE 228
Query: 305 PGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRD 364
+ F DLL ++ PEMRFR+++ HPKD D L ++
Sbjct: 229 V--------------------IEFPDLLAIVAEAAPEMRFRFSTSHPKDMSDRTLEVIAQ 268
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
PN+CK IHLP Q+G++ +L+ M R YTRE YL+ + IR+I+P+ +S+D CGF GET
Sbjct: 269 YPNLCKSIHLPVQSGSNKILKLMNRKYTREWYLERIAAIRRILPEASISTDVFCGFHGET 328
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
EE+H +TL+L++ V +D+A+MF YS R T A +N D++ EE K RRL E+I+ RE T
Sbjct: 329 EEDHQETLSLLREVNFDLAFMFKYSERPGTFAAKNLPDNISEEEKLRRLAEIIDLQRELT 388
Query: 485 GQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VG VLVEG +K++ + +L G++ + V F
Sbjct: 389 NQGNQRDVGKTFEVLVEGFSKRSKE-QLFGRTSQNKVVIF 427
>gi|443242791|ref|YP_007376016.1| 2-methylthioadenine synthetase [Nonlabens dokdonensis DSW-6]
gi|442800190|gb|AGC75995.1| 2-methylthioadenine synthetase [Nonlabens dokdonensis DSW-6]
Length = 490
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/448 (45%), Positives = 291/448 (64%), Gaps = 25/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ G++ N+ E+A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILAKEGFNTTNNM-EDADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +K + N+ G VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNRVKNKKNPNMKVG-----------VLGCMAERLKSKFLEEEKIVDMVVGPDAYKDL 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ E+D G+ +N LLS EETY DI+PVR++ N VTAFVS+ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLVAEIDEGRDAVNVLLSKEETYGDIAPVRLNSNGVTAFVSITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI++EV++LW +G KEVTLLGQNV+SY G L + F
Sbjct: 193 GRERSRDPQSILEEVNDLWNKGFKEVTLLGQNVDSYLWYGG-----------GLKKDFKK 241
Query: 318 MCKV-KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K+ K + FA LL +++ P+MR R+++ +P+D D++L+ + N+C YIHLP
Sbjct: 242 ASKMAKATAVDFAQLLHKVANAQPDMRVRFSTSNPQDISDDVLHAIAAHRNICNYIHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TRE Y+ L+ ++ IIP+ +S D I GF ETEE+H +TL+LM+
Sbjct: 302 QSGSDRILKEMNRLHTREEYMRLIDRVHAIIPECAVSQDMITGFPTETEEDHKNTLSLME 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPE+VK+RRL E+I R + + VG
Sbjct: 362 YVKYDYGFMFAYSERPGTMAARKLEDDVPEDVKKRRLNEIIAVQRRTGHERAQYFVGKTV 421
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
L+E +KK+ D + G++ + + F
Sbjct: 422 ECLIEKESKKS-DQQWAGRNTQNYVAIF 448
>gi|325299379|ref|YP_004259296.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Bacteroides salanitronis DSM 18170]
gi|324318932|gb|ADY36823.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides salanitronis DSM 18170]
Length = 463
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/469 (45%), Positives = 295/469 (62%), Gaps = 41/469 (8%)
Query: 56 LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENA 115
+ + ++ SATG E +++ ETYGCQMNV D E+V S+M+ AGY E + A
Sbjct: 1 MTNQTAGTDFKSATGKETK---KLFIETYGCQMNVADSEVVASVMQMAGY-EPCGTLDEA 56
Query: 116 EVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLK 175
+ +F+NTC+IRD AE K+ RL +F L+++ +K++ G VLGCMAER+K
Sbjct: 57 DAVFMNTCSIRDNAEQKILNRLEFFHALRKK-RKHLIVG-----------VLGCMAERVK 104
Query: 176 DKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVT 235
+ +++ + VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N V+
Sbjct: 105 EDLIE-NHHVDLVAGPDAYLSLPDLIASVEAGEKAINVELSTTETYRDVIPSRICGNRVS 163
Query: 236 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYND 295
+VS+MRGCNN C +CIVP+TRGRERSR V SI+ EV++L ++G KEVTLLGQNVNSY
Sbjct: 164 GYVSIMRGCNNFCHYCIVPYTRGRERSRDVASILNEVNDLCQKGYKEVTLLGQNVNSY-- 221
Query: 296 TSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFP 355
R + ++ + F LL ++ P MR R+T+ HPKD
Sbjct: 222 --------------RFEQADGTV-------ITFPMLLRTVAEAVPGMRVRFTTSHPKDMS 260
Query: 356 DELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSD 415
DE L ++ D PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+IIPD GLS+D
Sbjct: 261 DETLQVIADVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTD 320
Query: 416 FICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTE 475
GF ETEE+H +L+LM+ YD A+MF YS R T+A ++ DDVPEEVK RRL E
Sbjct: 321 IFSGFHSETEEDHQMSLSLMRECAYDSAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNE 380
Query: 476 LIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
LIE + + + VG VLVEG +K++ + +L G++++ V F
Sbjct: 381 LIELQNQLSAESNAKDVGKTFEVLVEGVSKRSKE-QLFGRTEQNKVVVF 428
>gi|340622497|ref|YP_004740949.1| tRNA-i(6)A37 methylthiotransferase [Capnocytophaga canimorsus Cc5]
gi|339902763|gb|AEK23842.1| tRNA-i(6)A37 methylthiotransferase [Capnocytophaga canimorsus Cc5]
Length = 481
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/452 (44%), Positives = 297/452 (65%), Gaps = 26/452 (5%)
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
++ ++Y E+YGCQMN +D EIV SI+ GY+ E A+++ +NTC+IR+ AE +
Sbjct: 21 NNHKKLYIESYGCQMNFSDSEIVASILSEQGYN-TTQTLEEADLVLVNTCSIREKAEQTI 79
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDA 193
+RL F +KR ++ K+ VLGCMAERLK L+ +K+VD+V GPDA
Sbjct: 80 RKRLEQFNAIKR------------NRPAMKVGVLGCMAERLKHAFLEEEKIVDMVVGPDA 127
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
Y+DLP LL+EV+ G++ +N +LS +ETYADISP+R++ N VTAFVS+ RGC+NMC+FCIV
Sbjct: 128 YKDLPNLLQEVEGGREAVNVILSKDETYADISPIRLNSNGVTAFVSITRGCDNMCTFCIV 187
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLS 312
PFTRGRERSR SI+ E+ +L + G KE+TLLGQNV+SY G++K+ + + +
Sbjct: 188 PFTRGRERSRDPFSILNEIKDLEERGFKEITLLGQNVDSYLWYGGGLKKDFDKASEMQ-- 245
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
K + FA LLD +++ P+MR R+++ +P+D +++ M N+CKYI
Sbjct: 246 ---------KATAVNFAKLLDMVAIAHPKMRIRFSTSNPQDMTLDVIDTMAKHHNICKYI 296
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G++ +L+ M R +TRE Y L+ IR+ IP+ +S D I GF ETE +H DTL
Sbjct: 297 HLPVQSGSNRILKAMNRLHTREEYFTLIDNIRKRIPECAISQDMIAGFPTETEADHQDTL 356
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+LM+ V YD +MFAYS R T A R DDVPEEVK+RRL+E+I+ ++ + +V
Sbjct: 357 SLMEYVKYDFGFMFAYSERPGTLAARKIEDDVPEEVKKRRLSEIIDLQQKHSLLRTQEKV 416
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VL+EG +KK+ D + +G++ + V F
Sbjct: 417 GQICEVLIEGNSKKS-DAQWMGRNTQNTVVVF 447
>gi|424841725|ref|ZP_18266350.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Saprospira grandis DSM 2844]
gi|395319923|gb|EJF52844.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Saprospira grandis DSM 2844]
Length = 483
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/450 (45%), Positives = 287/450 (63%), Gaps = 38/450 (8%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q R Y E+YGCQMN +D EIV SI++ AGY+ + A++I +NTC+IR+ AE V +
Sbjct: 37 QKRFYIESYGCQMNFSDSEIVASILQEAGYAST-KYMDAADLILVNTCSIREKAEDTVRK 95
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAY 194
RL F LK+E P +V VLGCMAERLK K+L+ +K+VD+V GPDAY
Sbjct: 96 RLRIFDKLKKE-------------RPGLLVGVLGCMAERLKSKLLEEEKLVDMVLGPDAY 142
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
RDLP L+ + G KGIN LS EETYADISPVR+S + VTAFV++MRGC+NMCSFC+VP
Sbjct: 143 RDLPNLIATAEDGDKGINVFLSREETYADISPVRLSDSGVTAFVTIMRGCDNMCSFCVVP 202
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
FTRGRERSR SI+ E +L+ G KEVTLLGQNV+SY +W EG
Sbjct: 203 FTRGRERSRDPYSILAECQDLFDRGFKEVTLLGQNVDSY--------------HWEHPEG 248
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ FADLL++ +L P++R R+++ HPKD D++L M N+C+YIH
Sbjct: 249 LEQ--------VDFADLLEKTALIHPDLRIRFSTSHPKDITDKVLINMGKYENICEYIHF 300
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S +L++M R Y R Y++ + +I +++P+ +SSD I GFC ETEE+H D+L++
Sbjct: 301 PVQSGSSRILKKMNRSYDRAWYINKIDRIYELLPNCAISSDVIAGFCTETEEDHQDSLSI 360
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ Y M+YMF YS R T A R Y DDVP +VK+RRL E+I + + +G
Sbjct: 361 IEHSQYSMSYMFFYSERPGTLAARKYEDDVPLDVKKRRLQEIIRLQNQISFVHNKKDIGK 420
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +K++ D + G++ + + F
Sbjct: 421 TFKVLIEKVSKRSED-DFAGRNSQNKMIVF 449
>gi|150009019|ref|YP_001303762.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Parabacteroides distasonis ATCC 8503]
gi|255014851|ref|ZP_05286977.1| putative tRNA-i(6)A37 modification enzyme MiaB [Bacteroides sp.
2_1_7]
gi|262383912|ref|ZP_06077048.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_33B]
gi|298375748|ref|ZP_06985704.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 3_1_19]
gi|410102740|ref|ZP_11297665.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides sp. D25]
gi|423330231|ref|ZP_17308015.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides distasonis CL03T12C09]
gi|229890584|sp|A6LEM6.1|MIAB_PARD8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|149937443|gb|ABR44140.1| conserved hypothetical protein, putative tRNA-i(6)A37 modification
enzyme MiaB [Parabacteroides distasonis ATCC 8503]
gi|262294810|gb|EEY82742.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_33B]
gi|298266785|gb|EFI08442.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 3_1_19]
gi|409231847|gb|EKN24695.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides distasonis CL03T12C09]
gi|409237867|gb|EKN30662.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides sp. D25]
Length = 457
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/461 (45%), Positives = 300/461 (65%), Gaps = 42/461 (9%)
Query: 64 EVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTC 123
++ SAT S+ + +++ ETYGCQMNV D E+V SIMK GYS N+ E A+ IF+NTC
Sbjct: 9 DLKSATQSD---ERKLFIETYGCQMNVADSEVVASIMKMDGYSMTENI-EEADAIFVNTC 64
Query: 124 AIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK 183
++RD AE K++ RL YF LKR+ KK++ G VLGCMAER+K+ ++
Sbjct: 65 SVRDNAEQKIYGRLQYFQSLKRK-KKSLIVG-----------VLGCMAERVKEDLIHVHH 112
Query: 184 MVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRG 243
D+V GPD+Y DLP L+ V++G+K IN LS +ETY D+ P+++ ++ FVS+MRG
Sbjct: 113 -ADLVVGPDSYLDLPNLVGAVEHGEKAINVELSTQETYKDVIPLKLPGVHISGFVSIMRG 171
Query: 244 CNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV 303
CNN C++CIVP+TRGRERSR +ESI+ E+ ++ ++G KEVTLLGQNVNSY+ EKE
Sbjct: 172 CNNFCTYCIVPYTRGRERSRDIESILNEIRDMHEKGFKEVTLLGQNVNSYS----FEKEG 227
Query: 304 EPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMR 363
E + F LLDR++ E P+MR R+T+ HPKD D+ L ++
Sbjct: 228 ET--------------------ITFPILLDRVAKEVPDMRIRFTTSHPKDMSDDTLRVIA 267
Query: 364 DRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGE 423
N+CK+IHLPAQ+G+S +L+ M R YTRE YLD + IR+I+PD +S+D CGF E
Sbjct: 268 ANDNICKFIHLPAQSGSSRILKVMNRKYTREWYLDRIAAIRRIVPDCAISTDLFCGFHSE 327
Query: 424 TEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRES 483
TEE++ +TL+LM+ VGYD A++F YS R T+A + D+VPEE K RRL +I+ +
Sbjct: 328 TEEDYQETLSLMREVGYDSAFLFKYSERPGTYAASHLEDNVPEEEKVRRLQGMIDLQNKL 387
Query: 484 TGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VL+EG +K++ + +L G++ + V F
Sbjct: 388 SEESNLRDIGKTFEVLIEGFSKRSRE-QLFGRTSQNKVVIF 427
>gi|218131688|ref|ZP_03460492.1| hypothetical protein BACEGG_03309 [Bacteroides eggerthii DSM 20697]
gi|217985991|gb|EEC52330.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides eggerthii DSM
20697]
Length = 456
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/463 (46%), Positives = 293/463 (63%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V + E A+ +F+N
Sbjct: 7 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VADTLEEADAVFMN 62
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ KKN+ G VLGCMAER+KD ++
Sbjct: 63 TCSIRDNAEQKILNRLEFFHSLKKK-KKNLIVG-----------VLGCMAERVKDDLI-T 109
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 110 NHHVDLVVGPDAYLTLPDLIAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIM 169
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 170 RGCNNFCTYCIVPYTRGRERSRDVESILNEVSDLVAKGYKEVTLLGQNVNSYR----FEK 225
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
A+ + + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 226 -----ADGEV--------------ITFPMLLRIVAGAAPGVRIRFTTSHPKDMSDETLQV 266
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ + PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+I+PD GLS+D GF
Sbjct: 267 IAEVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVDAIRRIVPDCGLSTDIFSGFH 326
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R T+A ++ DDVPEEVK RRL E+I
Sbjct: 327 SETEEDHQLSLSLMEECGYDAAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQN 386
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG VLVEG +K++ D +L G++++ V F
Sbjct: 387 RLSAEANARCVGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 428
>gi|392398393|ref|YP_006434994.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Flexibacter litoralis DSM 6794]
gi|390529471|gb|AFM05201.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Flexibacter litoralis DSM 6794]
Length = 495
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/485 (45%), Positives = 314/485 (64%), Gaps = 31/485 (6%)
Query: 48 SSLTASQPLADLA------PASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMK 101
+ L A + D+A P V + Q ++Y E+YGCQMN D E+V ++M+
Sbjct: 2 NKLIADIDIVDVASEAIHEPCETVKKTADNSKEGQRKLYIESYGCQMNFADSEVVAAVMQ 61
Query: 102 NAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHP 161
G+ N E+A++IF+NTC+IR+ AE V +RL + LK+ + P
Sbjct: 62 EHGFG-TTNKAEDADLIFLNTCSIREKAEQTVRKRLVHINGLKK-------------RKP 107
Query: 162 PKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEET 220
+V VLGCMAERLK K L+ +K+VD+V GPDAYRDLP+L+ VD GQK +N LLS EET
Sbjct: 108 EMMVGVLGCMAERLKHKFLEEEKIVDLVAGPDAYRDLPKLIGSVDDGQKAVNVLLSREET 167
Query: 221 YADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGV 280
YADI+P+R++ N ++AFVS+MRGC+N+CSFC+VPFTRGRERSRP +SIV+E+ +L +G
Sbjct: 168 YADIAPIRLNSNGISAFVSIMRGCDNVCSFCVVPFTRGRERSRPADSIVQEIKDLVAQGY 227
Query: 281 KEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFP 340
KEVTLLGQNV+SY T+ + + ++ AN+ G K FA LL+ ++
Sbjct: 228 KEVTLLGQNVDSYKWTN-VPRTIK-AANFEAETG------QKVRNENFATLLEMVAQIDS 279
Query: 341 EMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLV 400
+R R+T+ HPKD D++L++M N+CKYIHLP Q+GNS VL+ M R Y+RE Y+D V
Sbjct: 280 NLRVRFTTSHPKDMTDDVLHVMAKYENICKYIHLPVQSGNSRVLKLMNRTYSREWYIDRV 339
Query: 401 QKIRQII-PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRN 459
IR+I+ D +SSD I GFC ETEEEH +TLTLM+ V YD +YMF YS R T A +
Sbjct: 340 DAIRRILGDDCAISSDMIAGFCTETEEEHQETLTLMEYVNYDYSYMFFYSERPGTLAAKK 399
Query: 460 YVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRG 519
Y+DD+P ++K++RL+++IE + + +G VLVEG +K++ D +L G++
Sbjct: 400 YLDDIPMDIKKKRLSQIIELQSKHSLARNQRLIGKTHKVLVEGESKRS-DKDLQGRTTDN 458
Query: 520 HRVAF 524
+ F
Sbjct: 459 KVIIF 463
>gi|423346915|ref|ZP_17324602.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides merdae CL03T12C32]
gi|409218576|gb|EKN11544.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides merdae CL03T12C32]
Length = 456
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/452 (45%), Positives = 295/452 (65%), Gaps = 39/452 (8%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
V + +++ ETYGCQMNV D E+V SIMK GY+ V + E+A+ IF+NTC++RD AE K
Sbjct: 15 VTEEKKLFIETYGCQMNVADSEVVASIMKMDGYA-VTDKIEDADAIFVNTCSVRDNAEQK 73
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
++ RL YF LKR+ KK++ G VLGCMAER+K+++++ D+V GPD
Sbjct: 74 IYGRLQYFQSLKRK-KKSLVIG-----------VLGCMAERVKEELIEVHH-ADLVVGPD 120
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
+Y DLP L+ V++G+K IN LS +ETY D+ P+++ ++ FVS+MRGCNN C++CI
Sbjct: 121 SYMDLPNLVGAVEHGEKAINVELSTQETYKDVIPLKLGGVHISGFVSIMRGCNNFCTYCI 180
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRGRERSR +ESI+ E+ ++ +G KEVTLLGQNVNSY EKE E
Sbjct: 181 VPYTRGRERSRDIESILNEIRDMRDKGFKEVTLLGQNVNSYL----FEKEGEK------- 229
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ F LL R++ E PEMR R+T+ HPKD DE L+++ + N+CK I
Sbjct: 230 -------------ISFPALLKRVAEEVPEMRVRFTTSHPKDMSDETLHVIAEHDNICKMI 276
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLPAQ+G+S +L+ M R YTRE YLD + IR+I+PD +S+D CGF ETEE++ +TL
Sbjct: 277 HLPAQSGSSRILKVMNRKYTREWYLDRIAAIRRILPDCAISTDLFCGFHSETEEDYQETL 336
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+LM+ VGYD A++F YS R T+A ++ D V EE K RRL +I+ + + + +
Sbjct: 337 SLMREVGYDSAFLFKYSERPGTYAAQHLPDTVSEEEKVRRLQGMIDLQNQLSEESNKRDI 396
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VL+EG +K++ + +L G++ + V F
Sbjct: 397 GKVFEVLIEGFSKRSRE-QLFGRTSQNKVVIF 427
>gi|399028656|ref|ZP_10729843.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Flavobacterium sp. CF136]
gi|398073747|gb|EJL64911.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Flavobacterium sp. CF136]
Length = 481
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 294/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D EIV SI+ GY+ +V E A+++ +NTC+IRD AE + +RL
Sbjct: 25 KLFIESYGCAMNFSDSEIVASILSEGGYN-TTSVLEEADLVLVNTCSIRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLK + L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRINPK------------MKVGVLGCMAERLKSQFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G+ IN +LS EETY DISPVR+ N +TA VS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLLVEVEEGRDAINVILSKEETYGDISPVRLMSNGITALVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI++E+ +LW +G KE+TLLGQNV+SY G++K+ E + +
Sbjct: 192 GRERSREPQSIMREIQDLWDKGFKEITLLGQNVDSYLWYGGGLKKDFESASEMQ------ 245
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K + F LL+ +++ FP+MR R+++ +P+D + +L+++ PN+CK+IHLP
Sbjct: 246 -----KATAVDFDQLLEMVAVGFPKMRIRFSTSNPQDMHESVLHVIAKHPNICKHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y+ L+ KIR IIP+ +S D I GF ETE++H DT++LM+
Sbjct: 301 QSGSNRILKEMNRLHTREEYMTLIDKIRAIIPNASISQDMIAGFPTETEQDHQDTMSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YM++YS R T A R DDVPEE K RRL E+++ ++ + +G +
Sbjct: 361 YVKYNFGYMYSYSERPGTLAGRKMEDDVPEETKARRLQEIVDLQQKHAWFRSEEFIGQIV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +KK+ + E G++ + V F
Sbjct: 421 EVLVEKVSKKSKE-EFSGRNSQSITVVF 447
>gi|390953568|ref|YP_006417326.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Aequorivita sublithincola DSM 14238]
gi|390419554|gb|AFL80311.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Aequorivita sublithincola DSM 14238]
Length = 483
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 293/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGC MN +D EIV SI+ + GY+ N+ E A+++ +NTC+IRD AE + +RL
Sbjct: 27 KLYIESYGCAMNFSDSEIVASILADQGYN-TTNLLEEADLVLVNTCSIRDKAEQTIRKRL 85
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLK+K L+ +K+VD+V GPDAY+D+
Sbjct: 86 EKYNAVKRINPK------------MKVGVLGCMAERLKEKFLEEEKIVDLVVGPDAYKDI 133
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL+EV+ G+ +N +LS EETY DISPVR+ N +TA+VS+ RGC+NMC+FC+VPFTR
Sbjct: 134 PNLLKEVEEGRDAVNVILSKEETYGDISPVRLGGNGITAYVSITRGCDNMCTFCVVPFTR 193
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI+ E+D+L ++ KE+TLLGQNV+SY G++K+ + + + + +
Sbjct: 194 GRERSRDPQSILHEIDDLAEKNYKEITLLGQNVDSYLWFGGGLKKDFKNASEMQQATATD 253
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LLD + PEMR R+++ +P+D +E+L+I+ N+C +IHLP
Sbjct: 254 -----------FAQLLDMAATAHPEMRIRFSTNNPQDMHEEVLHIVAKHKNICNHIHLPV 302
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y+ L+ +I++IIPD +S D I GF ETEE+H DT++LM+
Sbjct: 303 QSGSTRILKEMNRQHTREQYMKLIDRIKEIIPDCSISQDMIIGFPTETEEDHQDTMSLME 362
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y YM+ YS R T A R DDVPEE K RRLTE+++ + ++ S +G
Sbjct: 363 YVKYSFGYMYKYSERPGTMAARKLEDDVPEETKSRRLTEIVDLQQRNSAIRTASFLGKTV 422
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK D E G+++ + F
Sbjct: 423 TVLIEKESKKNKD-EWSGRTEHNNTAVF 449
>gi|423304436|ref|ZP_17282435.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides uniformis CL03T00C23]
gi|423310450|ref|ZP_17288434.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides uniformis CL03T12C37]
gi|392681621|gb|EIY74978.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides uniformis CL03T12C37]
gi|392684765|gb|EIY78088.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides uniformis CL03T00C23]
Length = 457
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/463 (46%), Positives = 289/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V + E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VADTLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ K+ + G VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKK-KRGLIVG-----------VLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 ---PDGET----------------ITFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLQV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ D PNVCK+IHLP Q+G+S +L+ M R Y RE Y+D V IR+IIPD GLS+D GF
Sbjct: 266 IADMPNVCKHIHLPVQSGSSRILKLMNRKYDREWYMDRVAAIRRIIPDCGLSTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R THA ++ DDVPEEVK RRL E+I
Sbjct: 326 SETEEDHQLSLSLMEECGYDSAFMFKYSERPGTHASKHLPDDVPEEVKIRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAEANARCVGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|154494340|ref|ZP_02033660.1| hypothetical protein PARMER_03695 [Parabacteroides merdae ATCC
43184]
gi|423725471|ref|ZP_17699608.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides merdae CL09T00C40]
gi|154085784|gb|EDN84829.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Parabacteroides merdae
ATCC 43184]
gi|409234595|gb|EKN27423.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides merdae CL09T00C40]
Length = 456
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/452 (45%), Positives = 295/452 (65%), Gaps = 39/452 (8%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
V + +++ ETYGCQMNV D E+V SIMK GY+ V + E+A+ IF+NTC++RD AE K
Sbjct: 15 VTEEKKLFIETYGCQMNVADSEVVASIMKMDGYA-VTDKIEDADAIFVNTCSVRDNAEQK 73
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
++ RL YF LKR+ KK++ G VLGCMAER+K+++++ D+V GPD
Sbjct: 74 IYGRLQYFQSLKRK-KKSLVIG-----------VLGCMAERVKEELIEVHH-ADLVVGPD 120
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
+Y DLP L+ V++G+K IN LS +ETY D+ P+++ ++ FVS+MRGCNN C++CI
Sbjct: 121 SYMDLPNLVGAVEHGEKAINVELSTQETYKDVIPLKLGGVHISGFVSIMRGCNNFCTYCI 180
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRGRERSR +ESI+ E+ ++ +G KEVTLLGQNVNSY EKE E
Sbjct: 181 VPYTRGRERSRDIESILNEIRDMRDKGFKEVTLLGQNVNSYL----FEKEGEK------- 229
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ F LL R++ E PEMR R+T+ HPKD DE L+++ + N+CK I
Sbjct: 230 -------------ISFPALLKRVAEEVPEMRVRFTTSHPKDMSDETLHVIAEHDNICKMI 276
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLPAQ+G+S +L+ M R YTRE YLD + IR+I+PD +S+D CGF ETEE++ +TL
Sbjct: 277 HLPAQSGSSRILKVMNRKYTREWYLDRIAAIRRILPDCAISTDLFCGFHSETEEDYQETL 336
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+LM+ VGYD A++F YS R T+A ++ D V EE K RRL +I+ + + + +
Sbjct: 337 SLMREVGYDSAFLFKYSERPGTYAAQHLPDTVSEEEKVRRLQGMIDLQNQLSEESNKRDI 396
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VL+EG +K++ + +L G++ + V F
Sbjct: 397 GKVFEVLIEGFSKRSRE-QLFGRTSQNKVVIF 427
>gi|160888105|ref|ZP_02069108.1| hypothetical protein BACUNI_00513 [Bacteroides uniformis ATCC 8492]
gi|156862416|gb|EDO55847.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides uniformis
ATCC 8492]
Length = 457
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/463 (46%), Positives = 288/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V + E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VADTLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ K+ + G VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKK-KRGLIVG-----------VLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPELIASVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 ---PDGET----------------ITFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLQV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ D PNVCK+IHLP Q+G+S +L+ M R Y RE Y+D V IR+IIPD GLS+D GF
Sbjct: 266 IADMPNVCKHIHLPVQSGSSRILKLMNRKYDREWYMDRVAAIRRIIPDCGLSTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R THA + DDVPEEVK RRL E+I
Sbjct: 326 SETEEDHQLSLSLMEECGYDSAFMFKYSERPGTHASKYLPDDVPEEVKIRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAEANARCVGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|329963728|ref|ZP_08301174.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides fluxus YIT
12057]
gi|328527738|gb|EGF54730.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides fluxus YIT
12057]
Length = 458
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/463 (46%), Positives = 290/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAGTLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ ++ + + VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKKKRRLI------------VGVLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPELIAAVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L ++G KEVTLLGQNVNSY
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLAQKGYKEVTLLGQNVNSY------RF 222
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E GA + F LL ++ P MR R+T+ HPKD DE L +
Sbjct: 223 EKPDGAV-----------------VTFPMLLRTVAEAAPGMRVRFTTSHPKDMSDETLQV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ D PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+IIPD GLS+D GF
Sbjct: 266 IADMPNVCKHIHLPVQSGSSRILKLMNRRYTREWYLERVAAIRRIIPDCGLSTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R T+A ++ DDVPEEVK RRL E+I
Sbjct: 326 SETEEDHQLSLSLMEECGYDAAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAEANARCVGRTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|365875854|ref|ZP_09415379.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Elizabethkingia anophelis Ag1]
gi|442587549|ref|ZP_21006365.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Elizabethkingia anophelis R26]
gi|365756366|gb|EHM98280.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Elizabethkingia anophelis Ag1]
gi|442562720|gb|ELR79939.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Elizabethkingia anophelis R26]
Length = 478
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 279/430 (64%), Gaps = 25/430 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ GY+ + V E A++I +NTC+IR+ AE V RL
Sbjct: 26 KLFLESYGCQMNFSDSEIVASILNEQGYNTTLKV-EEADLILLNTCSIREKAEQTVRMRL 84
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ F ++E N+ G VLGCMAERLK K L+ + +VD+V GPDAYRDL
Sbjct: 85 SQFK-KQKESNPNLTVG-----------VLGCMAERLKTKFLEEEHLVDLVVGPDAYRDL 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL+E + G+ IN +LS EETYADI+PVR+ N VTAFV++ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLLKETEGGRDAINVILSKEETYADINPVRLGGNGVTAFVTITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SIV E EL+ G KEVTLLGQNV+SY G K + F
Sbjct: 193 GRERSRDPHSIVNECVELFNNGYKEVTLLGQNVDSYLWYGGGPK-----------KDFAK 241
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + F++LL ++ P+MR R+++ +P+D ++ + M N+CKY+HLP
Sbjct: 242 ASEMQKATAVNFSNLLAMVATAVPDMRIRFSTSNPQDMSLDVFHTMAKYDNICKYVHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TR YL L+ + ++I+P+V S D I GFCGETEE+H DTL+LM+
Sbjct: 302 QSGSDNMLKAMNRQHTRAEYLSLINEAKKIVPEVAFSQDMIIGFCGETEEDHQDTLSLMR 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YMFAYS R T AH+ DD+P ++KQ+RL E+I E + S VG
Sbjct: 362 EVEYDYGYMFAYSERPGTPAHKKMEDDIPADIKQKRLAEVIALQGELSRSRMKSYVGRTH 421
Query: 497 LVLVEGPNKK 506
+L+EG +KK
Sbjct: 422 DILIEGTSKK 431
>gi|424665700|ref|ZP_18102736.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis HMW 616]
gi|404573953|gb|EKA78704.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis HMW 616]
Length = 457
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/463 (45%), Positives = 294/463 (63%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E+A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEDADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K++ KK++ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKK-KKHLIVG-----------VLGCMAERVKDDLIE- 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
VD+V GPDAY LP L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 HHHVDLVVGPDAYLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KE+TLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVSKGYKEITLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E G + F LL ++ P++R R+T+ HPKD DE L +
Sbjct: 225 E---GGEV----------------VTFPMLLRVVAEAAPDVRIRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++I+PD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVSAIKRIVPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+A GYD A+MF YS R T+A ++ D+VPEEVK RRL E+I
Sbjct: 326 SETEEDHQESLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNTRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|145521116|ref|XP_001446413.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413891|emb|CAK79016.1| unnamed protein product [Paramecium tetraurelia]
Length = 504
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/479 (43%), Positives = 308/479 (64%), Gaps = 33/479 (6%)
Query: 51 TASQPLADLAPASEVSSATGSEVHSQG---RIYQETYGCQMNVNDMEIVLSIMKNAGYSE 107
T+ + + ++ SE +V++ + + ETYGCQMN ND +IV SI+ + GYS
Sbjct: 16 TSKRSINEIPSLSEFMKQQDPQVNNTNNGPKFFIETYGCQMNANDSQIVQSILSSEGYSN 75
Query: 108 VINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVL 167
++ E A++IF+NTC+IR AE KV+QR++ +SQ+K + +L
Sbjct: 76 TNDISE-ADIIFLNTCSIRANAEKKVFQRMSEL--------------KSQNK---VLGIL 117
Query: 168 GCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQ-KGINTLLSLEETYADISP 226
GCMAERLK+++ + +++ GPD+Y+ LP LL + K I+T LSL ETY DI P
Sbjct: 118 GCMAERLKEQLFV--QGANIIVGPDSYKSLPTLLNSFQLTRDKQIDTNLSLTETYDDILP 175
Query: 227 VRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLL 286
+ + +S+T +VS+MRGCNNMCSFC+VPFTRGRERSR ESI++E+ L ++G+KEVTLL
Sbjct: 176 INPT-DSITTYVSIMRGCNNMCSFCVVPFTRGRERSRNPESILEEIQILTQKGIKEVTLL 234
Query: 287 GQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKK-MGLRFADLLDRLSLEFPEMRFR 345
GQNVNSY ++ + + + GF + K++ GLRF LLD ++++FP+ R R
Sbjct: 235 GQNVNSY-----FFQDEKISSQHENTVGFTELYKLRSGNGLRFDQLLDEIAVKFPKTRIR 289
Query: 346 YTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQ 405
+TSPHPK+FP ++L ++ PN+CK IH+P Q+G+ +L++MRR YTR A +DL + R
Sbjct: 290 FTSPHPKNFPKKVLEVIAKHPNICKNIHIPIQSGSDEILKKMRRNYTRGAIVDLCNEART 349
Query: 406 IIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVP 465
+IP+V LS+D I GFC ETE + TL+L++ V ++ A+MFAYSMRE+THA+RN D+VP
Sbjct: 350 LIPNVTLSTDVIVGFCDETEYDFEQTLSLLQLVQFENAFMFAYSMREKTHAYRNLQDNVP 409
Query: 466 EEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
E VK RL +LIE + ++G +VLVE K +L G++D V F
Sbjct: 410 ESVKSSRLEKLIEQQHKIMNYKNSLEIGKKHIVLVEQLGNKP--NQLKGRTDSNKGVVF 466
>gi|423281352|ref|ZP_17260263.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis HMW 610]
gi|404583056|gb|EKA87739.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis HMW 610]
Length = 457
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/463 (45%), Positives = 293/463 (63%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K++ KK++ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKK-KKHLIVG-----------VLGCMAERVKDDLIE- 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
VD+V GPDAY LP L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 HHHVDLVVGPDAYLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KE+TLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVSKGYKEITLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E G + F LL ++ P++R R+T+ HPKD DE L +
Sbjct: 225 E---GGEV----------------VTFPMLLRAVAEAAPDVRVRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++I+PD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVSAIKRIVPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+A GYD A+MF YS R T+A ++ D+VPEEVK RRL E+I
Sbjct: 326 SETEEDHQESLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNTRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|270295132|ref|ZP_06201333.1| tRNA-I(6)A37 thiotransferase [Bacteroides sp. D20]
gi|317478131|ref|ZP_07937306.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 4_1_36]
gi|270274379|gb|EFA20240.1| tRNA-I(6)A37 thiotransferase [Bacteroides sp. D20]
gi|316905729|gb|EFV27508.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 4_1_36]
Length = 457
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/463 (46%), Positives = 288/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V + E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VADTLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ K+ + G VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKK-KRGLIVG-----------VLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 ---PDGET----------------ITFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLQV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ D PNVCK+IHLP Q+G+S +L+ M R Y RE Y+D V IR+IIPD GLS+D GF
Sbjct: 266 IADMPNVCKHIHLPVQSGSSRILKLMNRKYDREWYMDRVAAIRRIIPDCGLSTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R THA + DDVPEEVK RRL E+I
Sbjct: 326 SETEEDHQLSLSLMEECGYDSAFMFKYSERPGTHASKYLPDDVPEEVKIRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAEANARCVGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|163787659|ref|ZP_02182106.1| hypothetical protein FBALC1_03932 [Flavobacteriales bacterium
ALC-1]
gi|159877547|gb|EDP71604.1| hypothetical protein FBALC1_03932 [Flavobacteriales bacterium
ALC-1]
Length = 481
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/455 (43%), Positives = 292/455 (64%), Gaps = 29/455 (6%)
Query: 74 HSQG---RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAE 130
H +G +++ E+YGC MN +D EIV SI+ + G++ N+ E A+++ +NTC+IRD AE
Sbjct: 18 HKEGNKRKLFIESYGCAMNFSDSEIVASILSDQGFNTTKNLEE-ADLVLVNTCSIRDKAE 76
Query: 131 HKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCG 190
V +RL + +KR K K+ VLGCMAERLK K L+ +K+VD+V G
Sbjct: 77 QTVRKRLQQYNVVKRTNPK------------MKVGVLGCMAERLKTKFLEEEKIVDLVVG 124
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
PDAY+DLP LL EVD G+ IN +LS EETY DISPVR++ N VTAFVS+ RGC+NMC+F
Sbjct: 125 PDAYKDLPNLLAEVDEGRDAINVILSKEETYGDISPVRLNTNGVTAFVSITRGCDNMCTF 184
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
C+VPFTRGRERSR +SI++E+++LW +G KE+TLLGQNV+SY G++K+ + +
Sbjct: 185 CVVPFTRGRERSRDPQSIIEEINDLWAKGFKEITLLGQNVDSYLWYGGGLKKDFDKATDL 244
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
+ K + FA LL+ + P+MR R+++ +P+DF +++ M N+C
Sbjct: 245 Q-----------KATAVNFASLLELAAKAQPKMRIRFSTSNPQDFTLDVIETMSKYDNIC 293
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
K+IHLP Q+G+ +L+ M R +TRE Y +L+ IR+IIP+ +S D I GF E E++H
Sbjct: 294 KHIHLPVQSGSDRILKEMNRLHTREEYFELIDNIRRIIPECSISQDLIAGFPTENEQDHQ 353
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
DTL+LM+ V Y+ YMF YS R T A R DDVPEE K+RRL ++++ R+ +
Sbjct: 354 DTLSLMEYVKYNFGYMFTYSERPGTMAGRKMEDDVPEETKKRRLNDIVQLQRKHSDFRTR 413
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ T +L+E +KK+ D + G++ F
Sbjct: 414 QHLNTTVEILIEKSSKKS-DLQWSGRTSDNTVAVF 447
>gi|313149788|ref|ZP_07811981.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313138555|gb|EFR55915.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 457
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/463 (45%), Positives = 293/463 (63%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K++ KK++ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKK-KKHLIVG-----------VLGCMAERVKDDLIE- 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
VD+V GPDAY LP L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 HHHVDLVVGPDAYLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KE+TLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVSKGYKEITLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E G + F LL ++ P++R R+T+ HPKD DE L +
Sbjct: 225 E---GGEV----------------VTFPMLLRVVAEAAPDVRVRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++I+PD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVSAIKRIVPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+A GYD A+MF YS R T+A ++ D+VPEEVK RRL E+I
Sbjct: 326 SETEEDHQESLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNTRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|160884905|ref|ZP_02065908.1| hypothetical protein BACOVA_02895 [Bacteroides ovatus ATCC 8483]
gi|423214564|ref|ZP_17201092.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides xylanisolvens CL03T12C04]
gi|156109940|gb|EDO11685.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides ovatus ATCC
8483]
gi|392692979|gb|EIY86215.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides xylanisolvens CL03T12C04]
Length = 457
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/468 (45%), Positives = 290/468 (61%), Gaps = 45/468 (9%)
Query: 57 ADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAE 116
AD A+E++ +++ ETYGCQMNV D E++ S+M+ AGYS V E A+
Sbjct: 7 ADFKSATEMTD-------DNKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEAD 58
Query: 117 VIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKD 176
+F+NTC+IRD AE K+ RL +F LK++ K+ + + VLGCMAER+KD
Sbjct: 59 AVFMNTCSIRDNAEQKILNRLEFFHSLKKKKKRLI------------VGVLGCMAERVKD 106
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTA 236
++ + VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++
Sbjct: 107 DLI-TNHHVDLVVGPDAYLTLPDLIAAVETGEKAINVELSTTETYRDVIPSRICGNHISG 165
Query: 237 FVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDT 296
FVS+MRGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY
Sbjct: 166 FVSIMRGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSY--- 222
Query: 297 SGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPD 356
R + + F LL ++ P +R R+T+ HPKD D
Sbjct: 223 -------------RFERPTGEV-------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSD 262
Query: 357 ELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDF 416
E L ++ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++IIPD GL++D
Sbjct: 263 ETLEVIAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDI 322
Query: 417 ICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
GF ETEE+HA +L+LM+A GYD A+MF YS R T+A ++ D+VPEEVK RRL E+
Sbjct: 323 FSGFHSETEEDHAMSLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEI 382
Query: 477 IEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
I + + +G VLVEG +K++ D +L G++++ V F
Sbjct: 383 IALQNRLSAESNQRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 429
>gi|408490329|ref|YP_006866698.1| tRNA-i(6)A37 methylthiotransferase MaiB [Psychroflexus torquis ATCC
700755]
gi|408467604|gb|AFU67948.1| tRNA-i(6)A37 methylthiotransferase MaiB [Psychroflexus torquis ATCC
700755]
Length = 485
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/448 (45%), Positives = 291/448 (64%), Gaps = 28/448 (6%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y E+YGC MN +D EIV SI+ GY+ + E A+++ +NTC+IRD AE V +RL
Sbjct: 26 LYIESYGCAMNFSDSEIVASILNKEGYNTTNELSE-ADLVLVNTCSIRDKAEQTVRKRLE 84
Query: 139 YFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +K+ +P K+ VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 85 KYNAVKK-------------INPSMKVGVLGCMAERLKSKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LLEEV+ G+ IN +LS EETY DISPVR+ N V+AFVS+ RGC+NMC+FCIVPFTR
Sbjct: 132 PNLLEEVESGRDAINVILSKEETYGDISPVRLQSNGVSAFVSITRGCDNMCTFCIVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SI+ EV++LW +G KE+TLLGQNV+SY G L + F S
Sbjct: 192 GRERSRDPLSIIDEVNDLWSKGFKEITLLGQNVDSYLWYGG-----------GLKKDFKS 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + F+ LLD ++ P MR R+++ +P+D +++ +M N+C YIHLP
Sbjct: 241 ATEMQKATAVGFSHLLDIVAKAQPGMRIRFSTSNPQDMTIDVIEVMAKHNNICDYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L++M R +TRE Y L+ IR+IIP G+S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSDRILKKMNRLHTREEYFRLIDNIRKIIPGCGISQDMIIGFPSETEEDHKDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YMFAYS R T + + DD+PE K++RL E+I+ ++ + + +G ++
Sbjct: 361 NVKYNFGYMFAYSERPGTLGAKKFEDDIPEATKKKRLQEIIDVQQKHSRFRTEQHLGKIE 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +KK+ D++ G++ + V F
Sbjct: 421 EVLVEKESKKS-DSQWSGRNTQNTTVVF 447
>gi|167753302|ref|ZP_02425429.1| hypothetical protein ALIPUT_01575 [Alistipes putredinis DSM 17216]
gi|167659233|gb|EDS03363.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alistipes putredinis DSM
17216]
Length = 458
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 284/448 (63%), Gaps = 44/448 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D EIV++IM+ GY + E A+V+ INTC+IRD AE ++W RL
Sbjct: 18 KLFVETYGCQMNVGDTEIVVAIMQQEGYVYTDKI-EEADVVLINTCSIRDNAEQRIWGRL 76
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L+R + P +V ++GCMAERL++++L+ + VD+V GPDAYRD
Sbjct: 77 REMAHLRR-------------RRPGLLVGIIGCMAERLRERLLEGENPVDIVAGPDAYRD 123
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LPRL+ E G +G+N LLS EETYA+I+PVR+ +N V++++++MRGCNN CS+C+VP+T
Sbjct: 124 LPRLVREAGEGGRGVNVLLSREETYAEIAPVRLDRNGVSSYIAIMRGCNNYCSYCVVPYT 183
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG ERSR ++I+ E L++ G +EVTLLGQNVNSY
Sbjct: 184 RGVERSRDPQTILSEALCLFENGYREVTLLGQNVNSY----------------------- 220
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ + F +L+ +S P +R R+ + HPKD D LL +M +PN+C+ IHLPA
Sbjct: 221 -----RYGAVDFPELMRLVSEISPLLRVRFATSHPKDMSDRLLEVMASKPNICRCIHLPA 275
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +LE+M R YTRE YLD + IR+ +PD +++D I GFC ET+E+H TL+LM+
Sbjct: 276 QSGSSRMLEKMNRKYTREWYLDRIAAIRRYMPDCAITTDLIAGFCSETDEDHRQTLSLMR 335
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGY+ AYMF YS R T A R+ DDVP+ VK RL E+I + + VG
Sbjct: 336 EVGYEFAYMFKYSERPDTFAQRHMPDDVPDSVKTARLNEIIALQNTLSAESNARDVGKEF 395
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+LVEG +K++ D +L G++ + V F
Sbjct: 396 EILVEGTSKRS-DRQLFGRTSQNKVVVF 422
>gi|317474690|ref|ZP_07933964.1| MiaB family RNA modification enzyme [Bacteroides eggerthii
1_2_48FAA]
gi|316909371|gb|EFV31051.1| MiaB family RNA modification enzyme [Bacteroides eggerthii
1_2_48FAA]
Length = 456
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/463 (46%), Positives = 292/463 (63%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGY V + E A+ +F+N
Sbjct: 7 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYF-VADTLEEADAVFMN 62
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ KKN+ G VLGCMAER+KD ++
Sbjct: 63 TCSIRDNAEQKILNRLEFFHSLKKK-KKNLIVG-----------VLGCMAERVKDDLI-T 109
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 110 NHHVDLVVGPDAYLTLPDLIAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIM 169
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 170 RGCNNFCTYCIVPYTRGRERSRDVESILNEVSDLVAKGYKEVTLLGQNVNSYR----FEK 225
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
A+ + + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 226 -----ADGEV--------------ITFPMLLRIVAGAAPGVRIRFTTSHPKDMSDETLQV 266
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ + PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+I+PD GLS+D GF
Sbjct: 267 IAEVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVDAIRRIVPDCGLSTDIFSGFH 326
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R T+A ++ DDVPEEVK RRL E+I
Sbjct: 327 SETEEDHQLSLSLMEECGYDAAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQN 386
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG VLVEG +K++ D +L G++++ V F
Sbjct: 387 RLSAEANARCVGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 428
>gi|423343052|ref|ZP_17320766.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides johnsonii CL02T12C29]
gi|409216728|gb|EKN09711.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides johnsonii CL02T12C29]
Length = 457
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/461 (44%), Positives = 298/461 (64%), Gaps = 42/461 (9%)
Query: 64 EVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTC 123
++ SA G E + +++ ETYGCQMNV D E+V SIMK GY+ V + E+A+ IF+NTC
Sbjct: 9 DLKSAAGME---EKKLFIETYGCQMNVADSEVVASIMKMDGYA-VTDKIEDADAIFVNTC 64
Query: 124 AIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK 183
++RD AE K++ RL YF LKR+ KK + G VLGCMAER+K+++++
Sbjct: 65 SVRDNAEQKIYGRLQYFQSLKRK-KKTLVIG-----------VLGCMAERVKEELIEVHH 112
Query: 184 MVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRG 243
D+V GPD+Y DLP L+ V++G+K IN LS +ETY D+ P+++ ++ FVS+MRG
Sbjct: 113 -ADLVVGPDSYMDLPNLVGAVEHGEKAINVELSTQETYKDVIPLKLGGVHISGFVSIMRG 171
Query: 244 CNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV 303
CNN C++CIVP+TRGRERSR +ESI+ E+ ++ ++G KEVTLLGQNVNSY EKE
Sbjct: 172 CNNFCTYCIVPYTRGRERSRDIESILNEIRDMREKGFKEVTLLGQNVNSYL----FEKEG 227
Query: 304 EPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMR 363
E + F LL R++ E PEMR R+T+ HPKD DE L+++
Sbjct: 228 EK--------------------ISFPVLLKRVAEEVPEMRVRFTTSHPKDMSDETLHVIA 267
Query: 364 DRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGE 423
+ N+CK IHLPAQ+G+S +L+ M R YTRE YLD + IR+I+P +S+D CGF E
Sbjct: 268 EHDNICKMIHLPAQSGSSRILKVMNRKYTREWYLDRIAAIRRILPGCAISTDLFCGFHSE 327
Query: 424 TEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRES 483
TEE++ +TL+LM+ VGYD A++F YS R T+A ++ D V EE K RRL +I+
Sbjct: 328 TEEDYEETLSLMREVGYDSAFLFKYSERPGTYAAQHLPDTVSEEEKVRRLQGMIDLQNRL 387
Query: 484 TGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G V VL+EG +K++ + +L G++ + V F
Sbjct: 388 SEESNKRDIGKVFEVLIEGFSKRSRE-QLFGRTSQNKVVIF 427
>gi|89891819|ref|ZP_01203321.1| 2-methylthioadenine synthetase [Flavobacteria bacterium BBFL7]
gi|89515974|gb|EAS18639.1| 2-methylthioadenine synthetase [Flavobacteria bacterium BBFL7]
Length = 490
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 287/448 (64%), Gaps = 25/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGCQMN +D EIV SI+ G++ NV E A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLYIESYGCQMNFSDSEIVASILSKEGFN-TTNVLEEADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +K N+ G VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNRVKERQNPNMKVG-----------VLGCMAERLKSKFLEEEKIVDMVVGPDAYKDL 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ E+D G+ +N +LS EETY DI+PVR++ N VTAFVS+ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLVAEIDEGRDAVNVILSKEETYGDIAPVRLNTNGVTAFVSITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI++E+ +L +G KEVTLLGQNV+SY G++K+
Sbjct: 193 GRERSRDPQSILEEIADLTSKGFKEVTLLGQNVDSYLWYGGGLKKDFAKATPM------- 245
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ + FA LL++++ FP +R R+ + +P+D D++L+ + + N+C YIHLP
Sbjct: 246 ----AQATAVDFAQLLNQVATAFPNLRVRFATSNPQDISDDVLHAIANHRNICNYIHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TRE Y+ L+ ++ IIP+ +S D I GF ETEE+H DTL+LM+
Sbjct: 302 QSGSDRILKEMNRLHTREEYMRLIDRVHTIIPECAVSQDMITGFPTETEEDHQDTLSLME 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R DDVPE+VK RRL E+I R + + +G
Sbjct: 362 YVKYDYGFMFAYSERPGTMAARKMEDDVPEDVKSRRLNEIIAIQRRTGLERAQYFIGKTV 421
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
L+E +KK+ D++ G++ + + F
Sbjct: 422 ECLIEKESKKS-DSQWAGRNSQNYVAVF 448
>gi|146299610|ref|YP_001194201.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Flavobacterium
johnsoniae UW101]
gi|229890535|sp|A5FIU2.1|MIAB_FLAJ1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|146154028|gb|ABQ04882.1| RNA modification enzyme, MiaB family [Flavobacterium johnsoniae
UW101]
Length = 481
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 292/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D E+V SI+ + GY+ +V E A+++ +NTC+IRD AE + +RL
Sbjct: 25 KLFIESYGCAMNFSDSEVVASILSDGGYN-TTSVLEEADLVLVNTCSIRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLK + L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRTNPK------------MKVGVLGCMAERLKSQFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G+ IN +LS EETY DISPVR+ N +TA VS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLLAEVEEGRDAINVILSKEETYGDISPVRLMSNGITALVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI+ E+ +LW +G KE+TLLGQNV+SY G L + F +
Sbjct: 192 GRERSREPQSIMAEIQDLWSKGFKEITLLGQNVDSYLWYGG-----------GLKKDFVN 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + F LL+ +++ FP+MR R+++ +P+D + +L++M PN+CK+IHLP
Sbjct: 241 ASEMQKATAVDFDQLLEMVAVGFPKMRIRFSTSNPQDMHESILHVMAKYPNICKHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R ++RE Y+ L+ KIR I+PD +S D I GF ETE++H DT++LM+
Sbjct: 301 QSGSNRILKEMNRLHSREEYMALIDKIRAIVPDASISQDMIAGFPTETEQDHQDTMSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YM++YS R T A R DDV EE K RRL E+++ ++ + VG
Sbjct: 361 YVKYNFGYMYSYSERPGTLAGRKMKDDVEEETKARRLQEIVDLQQKHAWFRSEEFVGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +KK+ D E G++ + V F
Sbjct: 421 EVLVEKVSKKSKD-EFSGRNSQSITVVF 447
>gi|53711319|ref|YP_097311.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacteroides
fragilis YCH46]
gi|60679624|ref|YP_209768.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacteroides
fragilis NCTC 9343]
gi|265764766|ref|ZP_06093041.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
gi|336407573|ref|ZP_08588070.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp.
2_1_56FAA]
gi|375356426|ref|YP_005109197.1| putative SAM/TRAM family methylase protein [Bacteroides fragilis
638R]
gi|383116393|ref|ZP_09937143.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides sp. 3_2_5]
gi|423248050|ref|ZP_17229066.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL03T00C08]
gi|423253001|ref|ZP_17233932.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL03T12C07]
gi|423259623|ref|ZP_17240546.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL07T00C01]
gi|423263402|ref|ZP_17242405.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL07T12C05]
gi|423270066|ref|ZP_17249038.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL05T00C42]
gi|423272478|ref|ZP_17251425.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL05T12C13]
gi|81317302|sp|Q5LJ70.1|MIAB_BACFN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|81384036|sp|Q650P7.1|MIAB_BACFR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|52214184|dbj|BAD46777.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|60491058|emb|CAH05806.1| putative SAM/TRAM family methylase protein [Bacteroides fragilis
NCTC 9343]
gi|251948349|gb|EES88631.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides sp. 3_2_5]
gi|263254150|gb|EEZ25584.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
gi|301161106|emb|CBW20643.1| putative SAM/TRAM family methylase protein [Bacteroides fragilis
638R]
gi|335947477|gb|EGN09268.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp.
2_1_56FAA]
gi|387775933|gb|EIK38036.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL07T00C01]
gi|392657528|gb|EIY51161.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL03T12C07]
gi|392660924|gb|EIY54522.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL03T00C08]
gi|392699611|gb|EIY92785.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL05T00C42]
gi|392707697|gb|EIZ00813.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL07T12C05]
gi|392708908|gb|EIZ02010.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis CL05T12C13]
Length = 457
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/463 (45%), Positives = 293/463 (63%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K++ KK++ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKK-KKHLIVG-----------VLGCMAERVKDDLIE- 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
VD+V GPDAY LP L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 HHHVDLVVGPDAYLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KE+TLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVSKGYKEITLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E G + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 E---GGEV----------------VTFPMLLRLVAEAAPGIRVRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++I+PD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIVPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+A GYD A+MF YS R T+A ++ D+VPEE+K RRL E+I
Sbjct: 326 SETEEDHRESLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEEIKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNNRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|395803365|ref|ZP_10482612.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Flavobacterium
sp. F52]
gi|395434411|gb|EJG00358.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Flavobacterium
sp. F52]
Length = 481
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/448 (44%), Positives = 291/448 (64%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D E+V SI+ + GY+ +V E A+++ +NTC+IRD AE + +RL
Sbjct: 25 KLFIESYGCAMNFSDSEVVASILSDGGYN-TTSVLEEADLVLVNTCSIRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLK + L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRTNPK------------MKVGVLGCMAERLKSQFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G+ IN +LS EETY DISPVR+ N +TA VS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLLAEVEEGRDAINVILSKEETYGDISPVRLMSNGITALVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI+ E+ +LW +G KEVTLLGQNV+SY G L + F +
Sbjct: 192 GRERSREPQSIMAEIQDLWNKGYKEVTLLGQNVDSYLWYGG-----------GLKKDFVN 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + F LL+ ++ FP+MR R+++ +P+D + +L+++ PN+CK+IHLP
Sbjct: 241 ASEMQKATAVDFEQLLEMVAAGFPKMRIRFSTSNPQDMHESILHVIAKYPNICKHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R ++RE Y+ L+ KIR I+PD +S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSNRILKEMNRLHSREEYMALIDKIRAIVPDASISQDMIAGFPTETEEDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YM++YS R T A R DDV EE K RRL E+++ ++ + VG
Sbjct: 361 YVKYNFGYMYSYSERPGTLAGRKMKDDVEEETKARRLQEIVDLQQKHAWFRSEEFVGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +KK+ D E G++ + V F
Sbjct: 421 EVLVEKVSKKSKD-EFSGRNSQSITVVF 447
>gi|150026019|ref|YP_001296845.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Flavobacterium
psychrophilum JIP02/86]
gi|229890536|sp|A6H119.1|MIAB_FLAPJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|149772560|emb|CAL44043.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 481
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 292/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D EIV SI+ GY+ NV E A+++ +NTC+IRD AE + +RL
Sbjct: 25 KLFIESYGCAMNFSDSEIVASILSGNGYN-TTNVLEEADLVLVNTCSIRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLKDK L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRINPK------------MKVGVLGCMAERLKDKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G+ IN +LS +ETY DISPVR+ N +TA V++ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLLNEVEEGRDAINVILSKDETYGDISPVRLMSNGITALVAITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI+ E+ +LW +G KE+TLLGQNV+SY G L + F +
Sbjct: 192 GRERSREPQSIMAEIQDLWHKGFKEITLLGQNVDSYLWYGG-----------GLKKDFTN 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + F LL+ +++ FP+MR R+++ +P+D + +L++M N+CK+IHLP
Sbjct: 241 ASEIQKATAVDFDQLLEMVAVGFPKMRIRFSTSNPQDMHESILHVMAKHSNICKHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y+ L+ KIR IIP+ +S D I GF ETEE+H DT++LM+
Sbjct: 301 QSGSNRILKEMNRLHTREEYMILIDKIRAIIPNASISQDMIAGFPTETEEDHQDTISLMQ 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YM++YS R T A R DDV +E+K RRL E+++ ++ + +G
Sbjct: 361 YVKYNFGYMYSYSERPGTLAGRKMKDDVSDEIKARRLQEIVDLQQKHAWWRSEDFIGQTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +KK+ + E G++ + V F
Sbjct: 421 EVLVEKVSKKSTE-EFSGRNSQSITVVF 447
>gi|301312074|ref|ZP_07217996.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 20_3]
gi|423339373|ref|ZP_17317114.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides distasonis CL09T03C24]
gi|300830176|gb|EFK60824.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 20_3]
gi|409230754|gb|EKN23615.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides distasonis CL09T03C24]
Length = 457
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/461 (44%), Positives = 299/461 (64%), Gaps = 42/461 (9%)
Query: 64 EVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTC 123
++ SAT S+ + +++ ETYGCQMNV D E+V SIMK GYS N+ E A+ IF+NTC
Sbjct: 9 DLKSATQSD---ERKLFIETYGCQMNVADSEVVASIMKMDGYSMTENI-EEADAIFVNTC 64
Query: 124 AIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK 183
++RD AE K++ RL YF LKR+ KK++ G VLGCMAER+K+ ++
Sbjct: 65 SVRDNAEQKIYGRLQYFQSLKRK-KKSLIVG-----------VLGCMAERVKEDLIHVHH 112
Query: 184 MVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRG 243
D+V GPD+Y DLP L+ V++G+K IN LS +ETY D+ P+++ ++ FVS+MRG
Sbjct: 113 -ADLVVGPDSYLDLPNLVGAVEHGEKAINVELSTQETYKDVIPLKLPGVHISGFVSIMRG 171
Query: 244 CNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV 303
CNN C++CIVP+TRGRERSR +ESI+ E+ ++ ++G KEVTLLGQNVNSY+ EKE
Sbjct: 172 CNNFCTYCIVPYTRGRERSRDIESILNEIRDMHEKGFKEVTLLGQNVNSYS----FEKEG 227
Query: 304 EPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMR 363
E + F LLD ++ E P+MR R+T+ HPKD D+ L ++
Sbjct: 228 ET--------------------ITFPILLDCVAKEVPDMRIRFTTSHPKDMSDDTLRVIA 267
Query: 364 DRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGE 423
N+CK+IHLPAQ+G+S +L+ M R YTRE YLD + IR+I+PD +S+D CGF E
Sbjct: 268 ANDNICKFIHLPAQSGSSRILKVMNRKYTREWYLDRIAAIRRIVPDCAISTDLFCGFHSE 327
Query: 424 TEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRES 483
TEE++ +TL+LM+ VGYD A++F YS R T+A + D+VPEE K RRL +I+ +
Sbjct: 328 TEEDYQETLSLMREVGYDSAFLFKYSERPGTYAASHLEDNVPEEEKVRRLQGMIDLQNKL 387
Query: 484 TGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VL+EG +K++ + +L G++ + V F
Sbjct: 388 SEESNLRDIGKTFEVLIEGFSKRSRE-QLFGRTSQNKVVIF 427
>gi|256840979|ref|ZP_05546486.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13]
gi|256736822|gb|EEU50149.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13]
Length = 457
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/461 (44%), Positives = 298/461 (64%), Gaps = 42/461 (9%)
Query: 64 EVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTC 123
++ SAT S+ + +++ ETYGCQMNV D E+V SIMK GYS N+ E A+ IF+NTC
Sbjct: 9 DLKSATQSD---ERKLFIETYGCQMNVADSEVVASIMKMDGYSMTENI-EEADAIFVNTC 64
Query: 124 AIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK 183
++RD AE K++ RL YF LKR+ KK++ G VLGCMAER+K+ ++
Sbjct: 65 SVRDNAEQKIYGRLQYFQSLKRK-KKSLIVG-----------VLGCMAERVKEDLIHVHH 112
Query: 184 MVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRG 243
D+V GPD+Y DLP L+ V++G+K IN LS +ETY D+ P+++ ++ FVS+MRG
Sbjct: 113 -ADLVVGPDSYLDLPNLVGAVEHGEKAINVELSTQETYKDVIPLKLPGVHISGFVSIMRG 171
Query: 244 CNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV 303
CNN C++CIVP+TRGRERSR +ESI+ E+ ++ ++G KEVTLLGQNVNSY+ EKE
Sbjct: 172 CNNFCTYCIVPYTRGRERSRDIESILNEIRDMHEKGFKEVTLLGQNVNSYS----FEKEG 227
Query: 304 EPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMR 363
E + F LLDR++ E P+MR R+T+ HPKD D+ L ++
Sbjct: 228 ET--------------------ITFPILLDRVAKEVPDMRIRFTTSHPKDMSDDTLRVIA 267
Query: 364 DRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGE 423
N+CK+IHLPAQ+G+S +L M R YTRE YLD + IR+I+PD +S+D CGF E
Sbjct: 268 ANDNICKFIHLPAQSGSSRILMVMNRKYTREWYLDRIAAIRRIVPDCAISTDLFCGFHSE 327
Query: 424 TEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRES 483
TE ++ +TL+LM+ VGYD A++F YS R T+A + D+VPEE K RRL +I+ +
Sbjct: 328 TEGDYQETLSLMREVGYDSAFLFKYSERPGTYAASHLEDNVPEEEKVRRLQGMIDLQNKL 387
Query: 484 TGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VL+EG +K++ + +L G++ + V F
Sbjct: 388 SEESNLRDIGKTFEVLIEGFSKRSRE-QLFGRTSQNKVVIF 427
>gi|120437909|ref|YP_863595.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Gramella
forsetii KT0803]
gi|229890549|sp|A0M7D3.1|MIAB_GRAFK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|117580059|emb|CAL68528.1| tRNA-i(6)A37 modification enzyme MiaB [Gramella forsetii KT0803]
Length = 481
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/448 (44%), Positives = 292/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D EIV SI+ G++ N+ E A+++ +NTC+IR+ AE V +RL
Sbjct: 25 KLFIESYGCAMNFSDSEIVASILSKEGFNTTQNLEE-ADLVLVNTCSIREKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR + G K+ VLGCMAERLKDK L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKR-----INPGM-------KVGVLGCMAERLKDKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ EV+ G+ IN +LS EETY DISPVR+ N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLINEVEEGRDAINVILSKEETYGDISPVRLQSNGVSAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SIV+EV++L +G KE+TLLGQNV+SY G L + F +
Sbjct: 192 GRERSRDPQSIVEEVNDLAAKGYKEITLLGQNVDSYLWYGG-----------GLKKDFKN 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K FA LL ++ P+MR R+++ +P+D +++ M N+C YIHLP
Sbjct: 241 ATEIQKATATNFAALLKLVAEAQPKMRIRFSTSNPQDMTLDVIEAMAAYRNICNYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L++M R +TRE Y L+ I+++IP+ G+S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSDRILKKMNRLHTREEYFTLIDNIKKMIPNCGISHDLITGFPTETEEDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YMF YS R T A R DD+PEE K+RRL E+++ ++ + Q +S +GT
Sbjct: 361 YVKYDFGYMFTYSERPGTTAERKLEDDIPEETKKRRLQEIVDLQQKHSKQNTNSVIGTTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK+ + G+++R F
Sbjct: 421 EVLIEKESKKS-NKHWSGRNERNTVTVF 447
>gi|423282638|ref|ZP_17261523.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis HMW 615]
gi|404582206|gb|EKA86901.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides fragilis HMW 615]
Length = 457
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/463 (45%), Positives = 293/463 (63%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K++ KK++ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKK-KKHLIVG-----------VLGCMAERVKDDLIE- 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
VD+V GPDAY LP L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 HHHVDLVVGPDAYLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KE+TLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVSKGYKEITLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E G + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 E---GGEV----------------VTFPMLLRLVAEAAPGIRVRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++I+PD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIVPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+A GYD A+MF YS R T+A ++ D+VPEE+K RRL E+I
Sbjct: 326 SETEEDHRESLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEEIKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNNRCIGKTCEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|262405697|ref|ZP_06082247.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
gi|294810637|ref|ZP_06769287.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides xylanisolvens
SD CC 1b]
gi|345510888|ref|ZP_08790448.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Bacteroides
sp. D1]
gi|229442911|gb|EEO48702.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Bacteroides
sp. D1]
gi|262356572|gb|EEZ05662.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
gi|294442179|gb|EFG10996.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides xylanisolvens
SD CC 1b]
Length = 457
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/468 (45%), Positives = 290/468 (61%), Gaps = 45/468 (9%)
Query: 57 ADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAE 116
AD A+E++ +++ ETYGCQMNV D E++ S+M+ AGYS V E A+
Sbjct: 7 ADFKSATEMTD-------DNKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEAD 58
Query: 117 VIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKD 176
+F+NTC+IRD AE K+ RL +F LK++ K+ + + VLGCMAER+KD
Sbjct: 59 AVFMNTCSIRDNAEQKILNRLEFFHSLKKKKKRLI------------VGVLGCMAERVKD 106
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTA 236
++ + VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++
Sbjct: 107 DLI-TNHHVDLVVGPDAYLTLPDLIAAVETGEKAINVELSTTETYRDVIPSRICGNHISG 165
Query: 237 FVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDT 296
FVS+MRGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY
Sbjct: 166 FVSIMRGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSY--- 222
Query: 297 SGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPD 356
R + + F LL ++ P +R R+T+ HPKD D
Sbjct: 223 -------------RFERPTGEV-------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSD 262
Query: 357 ELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDF 416
E L ++ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++IIPD GL++D
Sbjct: 263 ETLEVIAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDI 322
Query: 417 ICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
GF ETE++HA +L+LM+A GYD A+MF YS R T+A ++ D+VPEEVK RRL E+
Sbjct: 323 FSGFHSETEKDHAMSLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEI 382
Query: 477 IEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
I + + +G VLVEG +K++ D +L G++++ V F
Sbjct: 383 IALQNRLSAESNQRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 429
>gi|167763971|ref|ZP_02436098.1| hypothetical protein BACSTE_02354 [Bacteroides stercoris ATCC
43183]
gi|167698087|gb|EDS14666.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides stercoris
ATCC 43183]
Length = 455
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/447 (47%), Positives = 286/447 (63%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E++ S+M+ AGYS V + E A+ +F+NTC+IRD AE K+ RL
Sbjct: 19 KLFIETYGCQMNVADSEVIASVMQMAGYS-VADTLEEADAVFMNTCSIRDNAEQKILNRL 77
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+F LK++ KKN+ G VLGCMAER+KD ++ + VD+V GPDAY L
Sbjct: 78 EFFHSLKKK-KKNLIVG-----------VLGCMAERVKDDLI-TNHHVDLVVGPDAYLSL 124
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+MRGCNN C++CIVP+TR
Sbjct: 125 PDLIAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIVPYTR 184
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK A+ +
Sbjct: 185 GRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK-----ADGEV------ 229
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ F LL ++ P +R R+T+ HPKD DE L ++ + PNVCK+IHLP Q
Sbjct: 230 --------VTFPMLLRTVAESAPGVRIRFTTSHPKDMSDETLQVIAEVPNVCKHIHLPVQ 281
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M R YTRE YL+ V IR+II D GLS+D GF ETEE+H +L+LM+
Sbjct: 282 SGSSRILKLMNRKYTREWYLERVDAIRRIISDCGLSTDIFSGFHSETEEDHRLSLSLMEE 341
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
GYD A+MF YS R T+A ++ DDVPEEVK RRL E+I + + +G
Sbjct: 342 CGYDAAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQNRLSAEANARCMGKTYE 401
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ D +L G++++ V F
Sbjct: 402 VLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|298483271|ref|ZP_07001450.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. D22]
gi|298270588|gb|EFI12170.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. D22]
Length = 457
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/468 (45%), Positives = 289/468 (61%), Gaps = 45/468 (9%)
Query: 57 ADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAE 116
AD A+E++ +++ ETYGCQMNV D E++ S+M+ AGYS V E A+
Sbjct: 7 ADFKSATEMTD-------DNKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEAD 58
Query: 117 VIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKD 176
+F+NTC+IRD AE K+ RL +F LK++ K+ + + VLGCMAER+KD
Sbjct: 59 AVFMNTCSIRDNAEQKILNRLEFFHSLKKKKKRLI------------VGVLGCMAERVKD 106
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTA 236
++ + VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++
Sbjct: 107 DLI-TNHHVDLVVGPDAYLTLPDLIAAVETGEKAINVELSTTETYRDVIPSRICGNHISG 165
Query: 237 FVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDT 296
FVS+MRGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY
Sbjct: 166 FVSIMRGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSY--- 222
Query: 297 SGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPD 356
R + + F LL ++ P +R R+T+ HPKD D
Sbjct: 223 -------------RFERPTGEV-------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSD 262
Query: 357 ELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDF 416
E L ++ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++IIPD GL++D
Sbjct: 263 ETLEVIAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDI 322
Query: 417 ICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
GF ETEE+HA +L+LM+A GYD A+MF YS R T+A ++ D+VPEEVK RL E+
Sbjct: 323 FSGFHSETEEDHAMSLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVHRLNEI 382
Query: 477 IEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
I + + +G VLVEG +K++ D +L G++++ V F
Sbjct: 383 IALQNRLSAESNQRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 429
>gi|229495400|ref|ZP_04389135.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Porphyromonas
endodontalis ATCC 35406]
gi|229317843|gb|EEN83741.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Porphyromonas
endodontalis ATCC 35406]
Length = 462
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/452 (44%), Positives = 287/452 (63%), Gaps = 35/452 (7%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
+ + +I+ ETYGCQMNV D E+V +IM+ AGY E+ + P++A+ I INTC++R+ AE K
Sbjct: 7 LQTTKKIHIETYGCQMNVADSEVVAAIMETAGY-EMSDSPDDADAILINTCSVRENAEKK 65
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
V RL ++ L+R+ K P I VLGCMAER++ ++++ D+V GPD
Sbjct: 66 VLNRLEHYNQLRRKHGK-----------PSIIGVLGCMAERVRQELIEKHG-ADIVAGPD 113
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
AY DLP L V+ G+K IN LS ETY D+ P++++ +T FVS+MRGC+N C++CI
Sbjct: 114 AYNDLPNLFAAVETGEKAINIDLSRTETYRDVIPLKLAGLHITGFVSIMRGCDNYCTYCI 173
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG ERSR VESI++E+D + + G +EVTLLGQNVNSY + P A
Sbjct: 174 VPYTRGHERSREVESILREIDHMVELGYREVTLLGQNVNSYRREAAT-----PDAP---- 224
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
FADLL ++ P+MR R+TSPHPKD D+ + +M PN+CK I
Sbjct: 225 ------------PFDFADLLQAVAERAPKMRIRFTSPHPKDMSDKTIAVMARYPNICKQI 272
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G++ +L++M+RGYTRE YLD V+ IR+ +P+ + +D CGFCGE+EE+ +TL
Sbjct: 273 HLPVQSGSNHILKQMKRGYTREWYLDRVRAIREAMPECSIGTDMFCGFCGESEEDFQETL 332
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
LM+ V +D A+MF YS R T A ++ DDVPEE K RRL E+I E + +
Sbjct: 333 RLMREVAFDSAFMFKYSERPGTFAAKHLQDDVPEETKIRRLNEMIALQNELSLASNKRDI 392
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VLVEG +K++ + EL G++ + V F
Sbjct: 393 GKQFEVLVEGTSKRSRE-ELFGRTSQNKVVVF 423
>gi|153807123|ref|ZP_01959791.1| hypothetical protein BACCAC_01400 [Bacteroides caccae ATCC 43185]
gi|423219896|ref|ZP_17206392.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides caccae CL03T12C61]
gi|149130243|gb|EDM21453.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides caccae ATCC
43185]
gi|392624462|gb|EIY18551.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides caccae CL03T12C61]
Length = 455
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/463 (45%), Positives = 289/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ K+ + + VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKKKKRLI------------VGVLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPDLIAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVSDLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 ---PTGEI----------------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++IIPD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+HA +L+LM+ GYD A+MF YS R T+A ++ D+VPE+VK RRL E+I
Sbjct: 326 SETEEDHALSLSLMEECGYDAAFMFKYSERPGTYASKHLEDNVPEDVKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNQRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|357061061|ref|ZP_09121822.1| hypothetical protein HMPREF9332_01379 [Alloprevotella rava F0323]
gi|355375286|gb|EHG22574.1| hypothetical protein HMPREF9332_01379 [Alloprevotella rava F0323]
Length = 454
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/459 (44%), Positives = 289/459 (62%), Gaps = 41/459 (8%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
+ SE SS + H +Y ETYGCQMNV D E+V S+MK AGY N+ E A+ +F
Sbjct: 3 SSGSEKSSIFAAMKH----LYIETYGCQMNVADSEVVASVMKMAGYEPTENIDE-ADAVF 57
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
+NTC++RD AE ++ RL+ L++ ++ + I VLGCMAER+K+ +L
Sbjct: 58 LNTCSVRDKAEQRIIHRLDELNGLRKHGRQLI------------IGVLGCMAERVKEGLL 105
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS 239
+ + D+V GPDAY LP L+ + + G K INT LSL ETY DI P R+ + ++ FVS
Sbjct: 106 N-EHHADLVAGPDAYLTLPDLVAQAETGHKAINTELSLTETYRDIVPERVCGSQLSGFVS 164
Query: 240 VMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGM 299
+ RGCNN C +CIVP+TRGRERSR +ESI++EV++L G KEVTLLGQNVNSY
Sbjct: 165 ITRGCNNFCHYCIVPYTRGRERSRDLESILQEVNDLHARGFKEVTLLGQNVNSYK----- 219
Query: 300 EKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELL 359
W ++G + L F +LL ++ P +R R+T+ HPKD D+ L
Sbjct: 220 ---------WVSADGERT--------LGFPELLRAVARAVPNIRVRFTTSHPKDMSDDTL 262
Query: 360 YIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICG 419
++ + PNVC++IHLP Q+G+ +L+RM R YTRE YLD V IR+I+P+ GLS+D G
Sbjct: 263 RVIAEEPNVCRHIHLPVQSGSDVILKRMNRKYTREWYLDRVAAIRRIVPNCGLSTDIFAG 322
Query: 420 FCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEA 479
+CGETEE+H +L+LM+ GYD A+MF YS R T+A ++ DD+PEE K RRL ELI
Sbjct: 323 YCGETEEDHQQSLSLMRECGYDSAFMFKYSERPGTYASKHLPDDIPEETKIRRLNELIAL 382
Query: 480 FRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDR 518
E + + G +LVEG +K++ D +L G++++
Sbjct: 383 QNELSAESNKRDEGREFEILVEGVSKRSRD-QLFGRTEQ 420
>gi|409123764|ref|ZP_11223159.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Gillisia sp.
CBA3202]
Length = 481
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/440 (45%), Positives = 291/440 (66%), Gaps = 26/440 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D EIV SI++ G++ N+ E+A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLFIESYGCAMNFSDSEIVASILQKEGFNTTQNL-EDADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 84 QKYNAVKRINPK------------MKVGVLGCMAERLKSKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ EV+ G+ +N +LS +ETY DISPVR+ N V+A VS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLISEVEEGRNAVNVILSKDETYGDISPVRLQSNGVSALVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI++EV++L +G KE+TLLGQNV+SY G L + F +
Sbjct: 192 GRERSRDPQSILEEVNDLASKGFKEITLLGQNVDSYLWYGG-----------GLKKDFKN 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K F+ LL ++ P+MR R+++ +P+D +++ +M PN+CK+IHLP
Sbjct: 241 ASEIEKATATNFSSLLKIVAEAHPKMRIRFSTSNPQDMTMDVVDMMVKYPNICKHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+++VL+RM R +TRE Y L+ IR+ IPD +S D I GFCGETEE+H DTL+LM+
Sbjct: 301 QSGSNSVLKRMNRLHTREEYFTLIDDIRKRIPDCVISQDMIAGFCGETEEDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YM++YS R T + + DDVPE+VKQRRL E+++ R + VG
Sbjct: 361 YVKYDFGYMYSYSERPGTLGAKKFEDDVPEDVKQRRLAEIVKLQRSHSLLRTQGYVGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKS 516
VL+E +KK+ D + G++
Sbjct: 421 EVLIERESKKS-DQQWSGRT 439
>gi|427384947|ref|ZP_18881452.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides oleiciplenus YIT 12058]
gi|425728208|gb|EKU91067.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides oleiciplenus YIT 12058]
Length = 455
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/463 (46%), Positives = 290/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS + E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYSAA-DTLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ K+N+ G VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKK-KRNLIVG-----------VLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPDLVAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVSDLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 ---PDGEV----------------VTFPMLLRTVAEAAPGVRVRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V I +I+PD GLS+D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVDAIHRIVPDCGLSTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+A GYD A+MF YS R T+A ++ DDVPEEVK RRL E+I
Sbjct: 326 SETEEDHQLSLSLMEACGYDSAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ + +LVG++++ V F
Sbjct: 386 RLSAESNARCIGKTYEVLVEGVSKRSRE-QLVGRTEQNRVVVF 427
>gi|397690621|ref|YP_006527875.1| RNA modification enzyme, MiaB family [Melioribacter roseus P3M]
gi|395812113|gb|AFN74862.1| RNA modification enzyme, MiaB family [Melioribacter roseus P3M]
Length = 441
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/450 (46%), Positives = 282/450 (62%), Gaps = 45/450 (10%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
++ +Y ETYGCQMN D E+V+ I+KN G+ N+ E A VI +NTC++RD AE K++
Sbjct: 2 NKNNVYIETYGCQMNFADSELVMGILKNKGFEVTRNIDE-ANVILLNTCSVRDNAEQKIF 60
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
RL++ +KRE + V I +LGCMAERL+ ++++ K+VDVV GPD Y
Sbjct: 61 HRLDHLKRIKRENPQAV------------IGILGCMAERLRKRLIEEKKIVDVVVGPDEY 108
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
R LP ++ G+KGI LS ETY DI P R ++ ++A++SVMRGC+ C+FC+VP
Sbjct: 109 RRLPEYIDHAFGGEKGIGVKLSRTETYDDIIPYR--EDGISAWISVMRGCDKFCTFCVVP 166
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
FTRGRERSR ++SIV EV L + KEVTLLGQNVNSYND
Sbjct: 167 FTRGRERSRSLDSIVNEVKSLSERNFKEVTLLGQNVNSYNDN------------------ 208
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
G FADLL + PEMR R+T+ HP+D D+LLY + + N+C YIHL
Sbjct: 209 ----------GRDFADLLSACADAAPEMRIRFTTSHPQDLSDKLLYAIAEHDNICNYIHL 258
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +LE M R YT E YL+L++K R+IIP V S+D I GF ETEE+H TL +
Sbjct: 259 PVQSGSNRILELMNRTYTIEHYLNLIEKARKIIPGVSFSTDIIAGFPTETEEDHRMTLEV 318
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
MK V YD AYMF YS RE T A+ + DDVPEE+K RRL E+I+ ++ + + S +G
Sbjct: 319 MKEVKYDGAYMFKYSPREGTKAY-SMTDDVPEEIKIRRLNEIIDLQQQISYEINQSLIGK 377
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++VLVEG +KK+ D L G++D F
Sbjct: 378 EEVVLVEGVSKKS-DEFLSGRTDTNKVAVF 406
>gi|423223014|ref|ZP_17209483.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides cellulosilyticus CL02T12C19]
gi|392640283|gb|EIY34085.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides cellulosilyticus CL02T12C19]
Length = 456
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/463 (45%), Positives = 289/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS + E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYSTA-DTLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F+ LK++ K+N+ G VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFYSLKKK-KRNLIVG-----------VLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPDLVAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVSDLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 ---PDGEV----------------VTFPMLLRTVAEAAPGVRVRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I +I+PD GLS+D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVDAIHRIVPDCGLSTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ YD A+MF YS R T+A ++ DDVPEEVK RRL E+I
Sbjct: 326 SETEEDHQLSLSLMEKCAYDSAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ + +LVG++++ V F
Sbjct: 386 RLSAESNARCIGKTYEVLVEGVSKRSRE-QLVGRTEQNRVVVF 427
>gi|295135976|ref|YP_003586652.1| tRNA-i(6)A37 modification enzyme MiaB [Zunongwangia profunda
SM-A87]
gi|294983991|gb|ADF54456.1| tRNA-i(6)A37 modification enzyme MiaB [Zunongwangia profunda
SM-A87]
Length = 481
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/448 (44%), Positives = 287/448 (64%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D EIV SI+ GY+ + E A+++ +NTC+IR+ AE V +RL
Sbjct: 25 KLFIESYGCQMNFSDSEIVASILSKEGYNTTQQL-EEADLVLVNTCSIREKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR N+ G VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKR-INPNMKVG-----------VLGCMAERLKSKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ EV+ G+ +N +LS EETY DISPVR+ N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLINEVEEGRNAVNVILSKEETYGDISPVRLQTNGVSAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI++EV++L G KE+TLLGQNV+SY G++K+ + +
Sbjct: 192 GRERSRDPQSIIEEVNDLASRGYKEITLLGQNVDSYLWYGGGLKKDFKDATPMQ------ 245
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K FA LL ++ P+MR R+++ +P+D +++ +M N+C YIHLP
Sbjct: 246 -----KATATSFASLLKMVAEAQPKMRIRFSTSNPQDMTLDVIEVMAAHRNICNYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L++M R +TRE Y L+ I+++IPD G+S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSDKMLKKMNRLHTREEYFTLIDNIKKLIPDCGISHDIITGFPTETEEDHKDTLSLMQ 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD +MFAYS R T A R + DDVPEE K+RRLTE++ +E + +G
Sbjct: 361 YVKYDFGFMFAYSERPGTMAARKFEDDVPEETKKRRLTEIVNLQQEHSKYRTQQFIGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK+ D G++ + V F
Sbjct: 421 EVLIEKSSKKS-DAHWSGRNTQNTVVVF 447
>gi|380693024|ref|ZP_09857883.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacteroides
faecis MAJ27]
Length = 455
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/463 (45%), Positives = 289/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ KKN+ G VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKK-KKNLIVG-----------VLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPELIAAVEAGEKAINVDLSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 ---PTGEV----------------VTFPMLLRTVAEAAPGVRVRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++I+PD GL++D GF
Sbjct: 266 IARVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIVPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R T+A ++ D+VPE+VK RRL E+I
Sbjct: 326 SETEEDHQLSLSLMEECGYDAAFMFKYSERPGTYASKHLEDNVPEDVKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNQRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|375254232|ref|YP_005013399.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Tannerella forsythia ATCC
43037]
gi|363408991|gb|AEW22677.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Tannerella forsythia ATCC
43037]
Length = 451
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/447 (45%), Positives = 289/447 (64%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R+Y ETYGCQMNV D E+V S+M+ GY E+ N A+ IF+NTC++RD AE +V RL
Sbjct: 13 RLYIETYGCQMNVADSEVVASVMQTDGY-ELTNDIREADAIFVNTCSVRDNAEQRVVGRL 71
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
YF L+++ KK++ G VLGCMAER+K+++++ D+V GPD+Y DL
Sbjct: 72 QYFQSLRKQ-KKHLIIG-----------VLGCMAERVKEELVNRHG-ADLVAGPDSYMDL 118
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ V+ G+K I+ LS +ETY D+ P++++ VT FVS+MRGCNN CS+CIVP+TR
Sbjct: 119 PNLVGAVERGEKAIHVELSTQETYRDVIPLKMAGVHVTGFVSIMRGCNNFCSYCIVPYTR 178
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR ++SI+ E+ ++ ++G K+VTLLGQNVNSY + +G
Sbjct: 179 GRERSRDIDSILNEIRDMRQKGYKDVTLLGQNVNSYR--------------YETPDG--- 221
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K +G F LLDR++ PEMR R+ + HPKD DE+LY+M N+CK+IHLPAQ
Sbjct: 222 ----KIIG--FPQLLDRVAEAVPEMRIRFMTSHPKDMSDEMLYVMAAHKNICKFIHLPAQ 275
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L M R YTRE YLD + IR+I+P+ +S+D CG+ ETEE++ +TL+LM+
Sbjct: 276 SGSSRMLAVMNRKYTREWYLDRIAAIRRILPECAISTDLFCGYHSETEEDYEETLSLMRE 335
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD A+MF YS R T+A ++ DDV EEVK RRL +IE + + +G
Sbjct: 336 VGYDAAFMFKYSERPGTYAAKHLPDDVSEEVKVRRLQGMIELQNQLSEASNRRDIGKTFE 395
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ D L G ++ V F
Sbjct: 396 VLVEGFSKRSRD-RLFGHTEHNKVVIF 421
>gi|298386977|ref|ZP_06996531.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 1_1_14]
gi|298260127|gb|EFI02997.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 1_1_14]
Length = 455
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/463 (45%), Positives = 288/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ KK + G VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKK-KKALIVG-----------VLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPELIAAVEAGEKAINVDLSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 ---PTGEV----------------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++IIPD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R T+A ++ D+VPE+VK RRL E+I
Sbjct: 326 SETEEDHQLSLSLMEECGYDAAFMFKYSERPGTYASKHLEDNVPEDVKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNQRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|442743204|ref|YP_007374508.1| RNA modification protein [Candidatus Uzinura diaspidicola str.
ASNER]
gi|442739272|gb|AGC66968.1| RNA modification protein [Candidatus Uzinura diaspidicola str.
ASNER]
Length = 470
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/436 (44%), Positives = 285/436 (65%), Gaps = 25/436 (5%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
+ ++ ++Y E YGCQMN++D EI+ S++ G+ + +A++I +NTC+IR+ AE
Sbjct: 12 IKNERKLYIENYGCQMNLSDSEIISSLLAEEGFFTFSKI-YDADLILLNTCSIREKAESN 70
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
+ +RL F ++K++ + +LGCMAERLK + L+ +K+VD+V GPD
Sbjct: 71 IRRRLIEFQYIKKKKPSIIIG------------LLGCMAERLKKRWLEEEKIVDLVVGPD 118
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
+YR LP L+ V+ G+ IN L S EE YAD++P+R+ N +TAFVS+ RGC+NMCSFC+
Sbjct: 119 SYRALPMLISRVEDGKSSINVLFSKEENYADVNPIRLGDNGITAFVSITRGCDNMCSFCV 178
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRL 311
VPFTRGRERSR SI+KE +LW +G KEV LLGQNV+SY GM+K+ + +
Sbjct: 179 VPFTRGRERSRDPASIIKECQKLWSQGYKEVNLLGQNVDSYFWYGGGMKKDFSKASPLQ- 237
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
K L FADLL+ ++ P+MR R+++ +P D + +L I+ PN+CKY
Sbjct: 238 ----------KATYLSFADLLELVARSVPKMRIRFSTSNPYDITENVLKIISHYPNICKY 287
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLP Q+G++ VLE M R YT E Y+ L++KIR+II D +S D I GF GE EE+H T
Sbjct: 288 IHLPLQSGSTRVLELMNRRYTSEKYVSLIRKIRKIITDCAISHDIIAGFSGEFEEDHRQT 347
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L LM+ V YD YMF YS+R T A ++ DDVPEE+K+RRL E++ ++ + +C +Q
Sbjct: 348 LNLMEYVRYDFGYMFIYSLRTGTKAEKSLFDDVPEEIKKRRLQEILFLQKKHSYECLQAQ 407
Query: 492 VGTVQLVLVEGPNKKA 507
G +Q VL+EG ++K+
Sbjct: 408 RGKIQEVLIEGESRKS 423
>gi|29348604|ref|NP_812107.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacteroides
thetaiotaomicron VPI-5482]
gi|383124773|ref|ZP_09945434.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides sp. 1_1_6]
gi|81443605|sp|Q8A2W0.1|MIAB_BACTN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|29340509|gb|AAO78301.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251841074|gb|EES69155.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides sp. 1_1_6]
Length = 455
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/463 (45%), Positives = 288/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ KK + G VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKK-KKALIVG-----------VLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPELIAAVEAGEKAINVDLSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 ---PTGEV----------------VTFPMLLRMVAEAAPGVRIRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++IIPD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R T+A ++ D+VPE+VK RRL E+I
Sbjct: 326 SETEEDHQLSLSLMEECGYDAAFMFKYSERPGTYASKHLEDNVPEDVKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNQRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|345867729|ref|ZP_08819734.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bizionia argentinensis
JUB59]
gi|344047896|gb|EGV43515.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bizionia argentinensis
JUB59]
Length = 479
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/448 (44%), Positives = 290/448 (64%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D E+V SI+ GY+ N+ E+A+++ +NTC+IRD AE + +RL
Sbjct: 25 KLFIESYGCAMNFSDSEVVASILYKEGYNTTQNL-EDADLVLVNTCSIRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +K+ K K+ VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKKINPK------------MKVGVLGCMAERLKSKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G+ IN +LS +ETY DISPVR++ N +TAFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLLSEVEAGRDAINVMLSKDETYGDISPVRLNTNGITAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI++EV++LW +G KE+TLLGQNV+SY G++K+ E ++
Sbjct: 192 GRERSRDPQSIMEEVNDLWSKGYKEITLLGQNVDSYLWYGGGLKKDFEKASDME------ 245
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K + F LL+ + P MR R+++ +P+D +++ M N+CK+IHLP
Sbjct: 246 -----KATAVNFCKLLELCAEAQPNMRIRFSTSNPQDMTLDVVETMAKYKNICKHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TRE Y +L+ IR+I+P+ +S D I GF ETE +H DTL+LM+
Sbjct: 301 QSGSDRILKEMNRLHTREEYKELITNIRKILPECSISMDMISGFPTETEADHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD A+M++YS R T A RN DDVPE VK+RRL E+I A R + +G
Sbjct: 361 FVKYDFAFMYSYSERPGTMAGRNMKDDVPETVKKRRLQEIIAAQRAHGHIRTQANLGRTL 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK+ D E G++ + V F
Sbjct: 421 EVLIEKSSKKS-DLEWSGRTSQNTVVIF 447
>gi|319900623|ref|YP_004160351.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides helcogenes P
36-108]
gi|319415654|gb|ADV42765.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides helcogenes P
36-108]
Length = 459
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/447 (46%), Positives = 284/447 (63%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+NTC+IRD AE K+ RL
Sbjct: 19 KLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMNTCSIRDNAEQKILNRL 77
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+F LK++ K+++ G VLGCMAER+KD ++ + VD+V GPDAY L
Sbjct: 78 EFFHSLKKK-KRHLIVG-----------VLGCMAERVKDDLI-TNHHVDLVVGPDAYLTL 124
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+MRGCNN C++CIVP+TR
Sbjct: 125 PELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIVPYTR 184
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK P
Sbjct: 185 GRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK---PDGGV-------- 229
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ F LL ++ +R R+T+ HPKD DE L ++ D PNVCK+IHLP Q
Sbjct: 230 --------VTFPILLRMVAEAAQGVRIRFTTSHPKDMSDETLQVIADMPNVCKHIHLPVQ 281
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M R YTRE YL+ V IR+IIPD GLS+D GF ETEE+H +L+LM+
Sbjct: 282 SGSSRILKLMNRRYTREWYLERVAAIRRIIPDCGLSTDIFSGFHSETEEDHQLSLSLMEE 341
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
GYD A+MF YS R T+A ++ DDVPEEVK RRL E+I + + VG +
Sbjct: 342 CGYDAAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQNRLSAEANARCVGRMYE 401
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ + +L G++++ V F
Sbjct: 402 VLVEGVSKRSRN-QLFGRTEQNRVVVF 427
>gi|305666326|ref|YP_003862613.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Maribacter sp. HTCC2170]
gi|88708318|gb|EAR00555.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Maribacter sp. HTCC2170]
Length = 481
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/436 (43%), Positives = 290/436 (66%), Gaps = 27/436 (6%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
V + ++ E+YGC MN +D EIV SI+ N G++ + E+A+++ +NTC+IR+ AE
Sbjct: 20 VKNTRNLFIESYGCAMNFSDSEIVASILANEGFNTTQKL-EDADLVLVNTCSIREKAELT 78
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGP 191
V +RL + +K+ K P K+ VLGCMAERLK K+L+ +K+VD+V GP
Sbjct: 79 VRKRLEKYNAIKK-------------KRPHMKVGVLGCMAERLKSKLLEEEKIVDMVVGP 125
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
DAY+DLP L++E+D G++ +N +LS +ETY DI+PVR++ N V+A VS+ RGC+NMC+FC
Sbjct: 126 DAYKDLPNLIQEIDEGREAVNVILSKDETYGDIAPVRLNTNGVSALVSITRGCDNMCTFC 185
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWR 310
+VPFTRGRERSR +SI+ EV++LW +G KE+TLLGQNV+SY G++K+ + + +
Sbjct: 186 VVPFTRGRERSRDSQSIIAEVNDLWNKGFKEITLLGQNVDSYLWYGGGLKKDFDKASEMQ 245
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
++ + FA+LLD ++ P+M R+++ +P+D +++ M N+C
Sbjct: 246 IATAVD-----------FANLLDMVAEAQPKMWIRFSTSNPQDMSLDVIKTMAKHDNICN 294
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+G++ +L+ M R +T E Y +L+ IR+IIP++ LS D I GF ETEE+H D
Sbjct: 295 HIHLPVQSGSNRILKAMNRLHTIEEYFELIDNIRKIIPEIALSHDMISGFPTETEEDHQD 354
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL ++ V YD YM++YS R T A R DD+PE+ KQRRL+E+I RE +
Sbjct: 355 TLAVLDRVKYDYGYMYSYSERPGTMAARKMDDDIPEKTKQRRLSEIIALQREHCQFRTEK 414
Query: 491 QVGTVQLVLVEGPNKK 506
+G+VQ +L+EG +KK
Sbjct: 415 HLGSVQEILIEGTSKK 430
>gi|333382392|ref|ZP_08474062.1| Dimethylallyladenosine tRNA methylthiotransferase miaB
[Dysgonomonas gadei ATCC BAA-286]
gi|332828703|gb|EGK01395.1| Dimethylallyladenosine tRNA methylthiotransferase miaB
[Dysgonomonas gadei ATCC BAA-286]
Length = 456
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/447 (45%), Positives = 290/447 (64%), Gaps = 37/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+M+ GY+ + + E+A+ +F+NTC+IRD AE +V QRL
Sbjct: 19 KLFIETYGCQMNVADSEVVASVMQMDGYT-MTDKLEDADAVFVNTCSIRDNAEQRVIQRL 77
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+YF LKR+ K N+ G VLGCMAER+K+++ D VDVV GPDAY DL
Sbjct: 78 DYFNALKRKKKPNMIIG-----------VLGCMAERVKEELHDKHH-VDVVVGPDAYLDL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ + G+K IN +LS ETY D+ P+RI N ++ F+S+MRGC+ +CS+CIVP+TR
Sbjct: 126 PNLVGAAESGEKAINVVLSKTETYKDVIPLRIGGNHISGFISIMRGCDKVCSYCIVPYTR 185
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI+ EV +L +G KEVTLLGQNVNSY E E G
Sbjct: 186 GRERSRLPQSILNEVADLRDKGFKEVTLLGQNVNSY------RYENEDGTV--------- 230
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ F+ LL+ ++LE P+MR R+T+ +P D DE L ++ N+CK+IHLP Q
Sbjct: 231 --------VDFSRLLEIVALEAPKMRIRFTTSYPTDMTDETLEVIAKYDNLCKFIHLPVQ 282
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L M+R Y RE YL+ ++ I++IIP GLS+D +CGF ETEE+ +TL+LM+
Sbjct: 283 SGSSRMLNVMKRKYDREWYLNRIEAIKRIIPGCGLSTDIMCGFHSETEEDQQETLSLMRE 342
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D A+MF YS R T A + DDVPE+VK +RL E+IE E + + +G V
Sbjct: 343 VCFDSAFMFKYSERPGTFAAKKLEDDVPEDVKIKRLQEIIELQNECSLESNKRDIGKVFE 402
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ + +L G++ + V F
Sbjct: 403 VLVEGFSKRSKE-QLFGRTSQNKVVIF 428
>gi|189464718|ref|ZP_03013503.1| hypothetical protein BACINT_01062 [Bacteroides intestinalis DSM
17393]
gi|189436992|gb|EDV05977.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides intestinalis
DSM 17393]
Length = 470
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/463 (46%), Positives = 288/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS + E A+ +F+N
Sbjct: 21 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYSTA-DTLEEADAVFMN 76
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ K+N+ G VLGCMAER+KD ++
Sbjct: 77 TCSIRDNAEQKILNRLEFFHSLKKK-KRNLIVG-----------VLGCMAERVKDDLI-T 123
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 124 NHHVDLVVGPDAYLTLPDLVAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIM 183
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 184 RGCNNFCTYCIVPYTRGRERSRDVESILNEVSDLVVKGYKEVTLLGQNVNSYR----FEK 239
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 240 ---PDGEV----------------VTFPMLLRTVAEAAPGVRVRFTTSHPKDMSDETLEV 280
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YL V IR+IIPD GLS+D GF
Sbjct: 281 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLGRVDAIRRIIPDCGLSTDIFSGFH 340
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R T+A ++ DDV EEVK RRL E+I
Sbjct: 341 SETEEDHLLSLSLMEICGYDSAFMFKYSERPGTYASKHLPDDVSEEVKIRRLNEIIALQN 400
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ + +LVG++++ V F
Sbjct: 401 RLSAESNARCIGKTYEVLVEGVSKRSRE-QLVGRTEQNRVVVF 442
>gi|319952447|ref|YP_004163714.1| tRNA-i(6)a37 thiotransferase enzyme miab [Cellulophaga algicola DSM
14237]
gi|319421107|gb|ADV48216.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Cellulophaga algicola DSM
14237]
Length = 480
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/448 (43%), Positives = 289/448 (64%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGC MN +D E+V SI+ G++ + E A+++ +NTC+IR+ AE V +RL
Sbjct: 25 KLYIESYGCAMNFSDSEVVASILAKEGFN-TTQILEEADLVLVNTCSIREKAELTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F +K+ ++ K+ VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKFNAVKK------------TRPHMKVGVLGCMAERLKSKFLEEEKIVDMVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L++E+D G+ +N +LS +ETY DISPVR+ N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLIKEIDEGRDAVNVILSKDETYGDISPVRLQTNGVSAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI+KE+ +L KEVTLLGQNV+SY G++KE E + +
Sbjct: 192 GRERSREPQSILKEIQDLHDSNFKEVTLLGQNVDSYLWYGGGLKKEFEKATDMQ------ 245
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K + F+ LLD ++ +FP+MR R+++ +P+D +++ + N+C +IHLP
Sbjct: 246 -----KATAVNFSSLLDTVAKKFPKMRIRFSTSNPQDMTLDVIETVAKHKNICNHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +T E Y+ L+ IR+I+PD +S D I GF ETEE+H T+ ++K
Sbjct: 301 QSGSNRILKEMNRLHTIEEYITLIDNIRRILPDCAISQDMISGFPTETEEDHQATIDVLK 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YM++YS R T A R DDVPEE K+RRL E+I RE+ +G +
Sbjct: 361 RVQYDFGYMYSYSERPGTMAARKLEDDVPEETKKRRLAEIIAVQRENGHIKTREHLGKTE 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +KK+ D + +G++ + V F
Sbjct: 421 EVLIEGSSKKS-DQDWMGRNSQNAVVIF 447
>gi|330997206|ref|ZP_08321059.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paraprevotella
xylaniphila YIT 11841]
gi|329571001|gb|EGG52708.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paraprevotella
xylaniphila YIT 11841]
Length = 441
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/447 (45%), Positives = 280/447 (62%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+M+ AGY E + A+ +F+NTC++RD AE K+ RL
Sbjct: 3 KLFIETYGCQMNVADSEVVASVMRMAGY-ETCETLDEADAVFLNTCSVRDNAEQKIINRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
L+R+ + V I VLGCMAER+K+++++ + VD+V GPDAY L
Sbjct: 62 EALHALRRKGRHLV------------IGVLGCMAERVKEELIE-NHHVDLVAGPDAYLSL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ +V+ G K IN LS+ ETY D+ P R+ + ++ FVS+MRGCNN C +CIVP+TR
Sbjct: 109 PDLIAQVELGHKAINVELSVTETYRDVIPQRVCGSHISGFVSIMRGCNNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L K G KEVTLLGQNVNSY G K V
Sbjct: 169 GRERSRDVESILNEVRDLKKRGYKEVTLLGQNVNSYLHVGGDGKTVS------------- 215
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
F LL ++ E MR R+T+ HPKD D+ L ++ + PNVC++IHLP Q
Sbjct: 216 ----------FPQLLRLVAHEADGMRVRFTTSHPKDMSDDTLRVIAEEPNVCRHIHLPVQ 265
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L+ M R YTRE YLD V IR+I+PD GLS+D G+C ETEE+H +L+LM+
Sbjct: 266 SGSDRILKLMNRKYTREWYLDRVAAIRRIVPDCGLSTDIFSGYCSETEEDHQMSLSLMRE 325
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
YD A+MF YS R T+A ++ DDVPE+VK RRL ELI E + + G V
Sbjct: 326 CAYDSAFMFKYSERPGTYASKHLPDDVPEDVKVRRLNELIALQNELSAESNRHCEGRVYE 385
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ + +L G++++ V F
Sbjct: 386 VLVEGVSKRSKE-QLFGRTEQNKVVVF 411
>gi|313887037|ref|ZP_07820737.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Porphyromonas
asaccharolytica PR426713P-I]
gi|312923563|gb|EFR34372.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Porphyromonas
asaccharolytica PR426713P-I]
Length = 450
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/447 (44%), Positives = 280/447 (62%), Gaps = 37/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R++ ETYGCQMNV D EI+ + M+ AGY + E A+ + INTC++RD AE ++ RL
Sbjct: 11 RVFIETYGCQMNVADSEIIAAQMQLAGYQLTDQIDE-ADAVLINTCSVRDNAEQRIIHRL 69
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ N+ R +S HP + VLGCMAER+++ ++ D VD+V GPDAY DL
Sbjct: 70 D-----------NLNGQRRRSGHPQIVGVLGCMAERVRETLIQ-DHGVDLVAGPDAYTDL 117
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ + G+ I+ LS ETY+D+ PVR+ ++ FVS+MRGC+N C++CIVP+TR
Sbjct: 118 PHLIAAAEAGEPAISIELSKSETYSDVIPVRLPGLHISGFVSIMRGCDNFCTYCIVPYTR 177
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR ESIV+EV + +EG +EVTLLGQNVNSY W+ G
Sbjct: 178 GRERSRDPESIVREVQRMAQEGYREVTLLGQNVNSYC--------------WQSETG--- 220
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ FADLL +++ P MR R+TSPHPKD DE L +M PN+C++IH P Q
Sbjct: 221 ------VSYTFADLLRKVAEAVPTMRIRFTSPHPKDMKDETLEVMSLYPNICRHIHFPLQ 274
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ +LERM R YTRE YL+ V++IR +PD GLS+D CGF GETEE+ +TL +M+
Sbjct: 275 SGSNRILERMHRRYTREWYLERVERIRDYMPDCGLSTDVFCGFSGETEEDFQETLEVMRQ 334
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
D A+MF YS R T+A R+ VDDVPEEVK RL +I E + + + VG
Sbjct: 335 ARLDSAFMFKYSERPGTYASRHLVDDVPEEVKVERLNRMIALQNELSLESNERDVGKSFE 394
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +K++ D + G++ + + F
Sbjct: 395 VLIEGYSKRSRD-DFFGRTQQNKVIVF 420
>gi|402495018|ref|ZP_10841752.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Aquimarina
agarilytica ZC1]
Length = 482
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/444 (45%), Positives = 285/444 (64%), Gaps = 28/444 (6%)
Query: 68 ATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRD 127
AT S +++ +++ E+YGCQMN +D E+V SI+ N G++ N E+A+++ +NTC+IRD
Sbjct: 17 ATNS--NNKRKLFIESYGCQMNFSDSEVVASILANNGFN-TTNKLEDADLVLVNTCSIRD 73
Query: 128 YAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVD 186
AE V +RL + +KR +++P K+ VLGCMAERLK+K LD +K+VD
Sbjct: 74 KAEQTVRKRLEKYNAVKR------------NQNPKMKVGVLGCMAERLKEKFLDEEKIVD 121
Query: 187 VVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNN 246
+V GPDAY+DLP LL EVD G+ +N +LS +ETY DISPVR+ N V+A VS+ RGC+N
Sbjct: 122 LVVGPDAYKDLPNLLNEVDEGRDAVNVILSKDETYGDISPVRLQSNGVSALVSITRGCDN 181
Query: 247 MCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEP 305
MC+FC+VPFTRGRERSR +SI++EV +L +G KEVTLLGQNV+SY G++K+ E
Sbjct: 182 MCTFCVVPFTRGRERSRDPQSIMQEVADLISKGYKEVTLLGQNVDSYLWYGGGLKKDFEK 241
Query: 306 GANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
+ K FA LLD ++ + P++R R+++ +P+D + + +M
Sbjct: 242 ASEI-----------AKATATNFAKLLDLIATKHPKLRIRFSTSNPQDMTMDAIDVMAKH 290
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETE 425
N+C YIHLP Q+G++ VL+ M R +TRE Y +L+ I+ IPD S D I GF ETE
Sbjct: 291 KNICNYIHLPVQSGSNRVLKAMNRQHTREEYFELIDNIKTRIPDCAFSQDMITGFPTETE 350
Query: 426 EEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG 485
E+H DTL+LM+ V Y YMFAYS R T A R DD+ E +K+RRL E+I+ +
Sbjct: 351 EDHQDTLSLMEYVKYHFGYMFAYSERPGTLAERKLEDDISEAIKKRRLQEVIDKQQAHAK 410
Query: 486 QCYDSQVGTVQLVLVEGPNKKAPD 509
+G VLVE +KK+ +
Sbjct: 411 LRTAEYLGKTLEVLVERTSKKSAE 434
>gi|363581288|ref|ZP_09314098.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Flavobacteriaceae bacterium HQM9]
Length = 482
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 282/442 (63%), Gaps = 26/442 (5%)
Query: 70 GSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYA 129
+ +++ +++ E+YGCQMN +D E+V SI+ G++ N E+A+++ +NTC+IRD A
Sbjct: 17 ATNANNKRKLFIESYGCQMNFSDSEVVASILATNGFN-TTNKLEDADLVLVNTCSIRDKA 75
Query: 130 EHKVWQRLNYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVV 188
E V +RL + +KR +++P K+ VLGCMAERLK K L+ +K+VD+V
Sbjct: 76 EQTVRKRLEKYNAVKR------------NQNPKMKVGVLGCMAERLKSKFLEEEKIVDLV 123
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
GPDAY+DLP LL EVD G+ +N +LS +ETY DISPVR+ N V+A VS+ RGC+NMC
Sbjct: 124 VGPDAYKDLPNLLNEVDEGRDAVNVILSKDETYGDISPVRLQSNGVSALVSITRGCDNMC 183
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
+FC+VPFTRGRERSR +SI++EV +L ++G KEVTLLGQNV+SY G
Sbjct: 184 TFCVVPFTRGRERSRDPQSIIQEVTDLVEKGYKEVTLLGQNVDSYLWYGG---------- 233
Query: 309 WRLSEGFNSMCKV-KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
L + F+ ++ K FA LLD ++ +P++R R+++ +P+D E + +M N
Sbjct: 234 -GLKKDFDKASEIAKATATNFAKLLDLIATTYPKLRIRFSTSNPQDMTMEAIDVMAKHNN 292
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
+C YIHLP Q+G++ +L+ M R +TRE Y +L+ I++ +PD S D I GF ETEE+
Sbjct: 293 ICNYIHLPVQSGSNRILKEMNRQHTREEYFELIDNIKKRLPDCAFSQDMITGFPTETEED 352
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
H DTL+LM V Y YMFAYS R T A R DD+PE VK+RRL E+I +
Sbjct: 353 HKDTLSLMDYVKYHFGYMFAYSERPGTLAERKLADDIPETVKKRRLQEVINKQQAHAKLR 412
Query: 488 YDSQVGTVQLVLVEGPNKKAPD 509
+G VLVE +KK+ +
Sbjct: 413 TAEYLGRTLEVLVERTSKKSAE 434
>gi|386819821|ref|ZP_10107037.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Joostella marina DSM 19592]
gi|386424927|gb|EIJ38757.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Joostella marina DSM 19592]
Length = 481
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/454 (43%), Positives = 291/454 (64%), Gaps = 26/454 (5%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
EV + ++Y E+YGCQMN +D EIV SI+ G++ + E A+++ +NTC+IRD AE
Sbjct: 19 EVTNSRKLYIESYGCQMNFSDSEIVASILAKEGFNTTEKMEE-ADLVLVNTCSIRDKAEQ 77
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGP 191
V +RL F +KR K K+ VLGCMAERLKDK L+ +K+VD+V GP
Sbjct: 78 TVRKRLEKFNAVKRINPK------------MKVGVLGCMAERLKDKFLEEEKIVDMVVGP 125
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
DAY+DLP L++E+ G+ +N +LS EETY D++PVR++ N V+AFVS+ RGC+NMC+FC
Sbjct: 126 DAYKDLPNLVQEIGEGKNAVNVILSKEETYGDVAPVRLNTNGVSAFVSITRGCDNMCTFC 185
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWR 310
+VPFTRGRERSR +SI++EV L + G KE+TLLGQNV+SY G++K+ + ++ +
Sbjct: 186 VVPFTRGRERSRDPQSILEEVKNLAERGFKEITLLGQNVDSYLWYGGGLKKDYDKASDMQ 245
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
K + F++LL ++ P+MR R+++ +P+D +++ M N+CK
Sbjct: 246 -----------KATAVNFSELLSLVAEAHPKMRIRFSTSNPQDMTLDVIETMAKHKNICK 294
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+G++ +L+ M R +TRE Y +L+ IR+I+P+ +S D I GF ET ++H D
Sbjct: 295 HIHLPVQSGSNRILKEMNRLHTREEYFELIDNIRKILPECSVSQDMIIGFPTETTKDHED 354
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
T+ LM+ V YD YMF YS R T A R DDVPEE K+ RLTE+I ++ +
Sbjct: 355 TMDLMEHVKYDFGYMFTYSERPGTLAERKLEDDVPEETKKSRLTEIINLQQKHSAFRTKQ 414
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G VL+EG +KK+ D +G++ + F
Sbjct: 415 NLGKTVEVLIEGNSKKS-DAHWMGRTSQNTVTVF 447
>gi|255693332|ref|ZP_05417007.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides finegoldii
DSM 17565]
gi|260620909|gb|EEX43780.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides finegoldii
DSM 17565]
Length = 455
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/447 (46%), Positives = 282/447 (63%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+NTC+IRD AE K+ RL
Sbjct: 19 KLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMNTCSIRDNAEQKILNRL 77
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+F LK++ K + + VLGCMAER+KD ++ + VD+V GPDAY L
Sbjct: 78 EFFHSLKKKKKHLI------------VGVLGCMAERVKDDLI-TNHHVDLVVGPDAYLTL 124
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+MRGCNN C++CIVP+TR
Sbjct: 125 PDLIAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIVPYTR 184
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK P
Sbjct: 185 GRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK---PTGET-------- 229
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ F LL ++ P +R R+T+ HPKD DE L ++ PNVCK+IHLP Q
Sbjct: 230 --------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQ 281
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M R YTRE YLD V I++IIPD GL++D GF ETEE+HA +L+LM+
Sbjct: 282 SGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSGFHSETEEDHAMSLSLMEE 341
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
GYD A+MF YS R T+A ++ D+VPEEVK RRL E+I + + +G
Sbjct: 342 CGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEIIALQNRLSAESNQRCIGKTYE 401
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ D +L G++++ V F
Sbjct: 402 VLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>gi|381187469|ref|ZP_09895033.1| tRNA-i(6)A37 methylthiotransferase [Flavobacterium frigoris PS1]
gi|379650597|gb|EIA09168.1| tRNA-i(6)A37 methylthiotransferase [Flavobacterium frigoris PS1]
Length = 481
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/448 (43%), Positives = 291/448 (64%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D EIV SI+ GY+ V E A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLFIESYGCAMNFSDSEIVASILSGNGYN-TTQVLEEADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLK + L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRINPK------------MKVGVLGCMAERLKTQFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL+EV+ G+ IN +LS +ETY DISPVR+ N +TA VS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLLQEVEEGRNAINVILSKDETYGDISPVRLMSNGITALVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI+KE+ +LW +G KE+TLLGQNV+S+ G L + F +
Sbjct: 192 GRERSREPQSIMKEIQDLWDKGFKEITLLGQNVDSFLWYGG-----------GLKKDFVA 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + F LL+ +++ FP+MR R+++ +P+D + +L+++ N+CK+IHLP
Sbjct: 241 ATEMQKATAVDFDQLLEMVAVGFPKMRIRFSTSNPQDMHESVLHVIAKHNNICKHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y+ L+ KIR IIP+ +S D I GF ETE++H DTL+LM+
Sbjct: 301 QSGSNRILKEMNRLHTREEYMTLIDKIRAIIPNGSISQDMIAGFPTETEQDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YM++YS R T A R DDV +E K RRL E+++ ++ + +G
Sbjct: 361 YVKYNFGYMYSYSERPGTLAGRKMEDDVTDETKARRLQEIVDLQQKHAWSRSEEFIGQTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +KK+ + E G++ + V F
Sbjct: 421 EVLVEKVSKKSTE-EFSGRNSQSITVVF 447
>gi|260885970|ref|ZP_05736252.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella tannerae ATCC
51259]
gi|260851116|gb|EEX70985.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella tannerae ATCC
51259]
Length = 458
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/443 (44%), Positives = 279/443 (62%), Gaps = 37/443 (8%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMNV D E+V S+MK AGY N+ E A+ +F+NTC++RD AE ++ RL+
Sbjct: 24 ETYGCQMNVADSEVVASVMKMAGYEPTENLDE-ADAVFLNTCSVRDNAEQRIIHRLDALH 82
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLL 201
L++ ++ + I VLGCMAER+K+ +L D D+V GPDAY LP L+
Sbjct: 83 ALRKHGRRLI------------IGVLGCMAERVKEGLLH-DHHADLVAGPDAYLSLPDLI 129
Query: 202 EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRER 261
+ + G K +N LS ETY D+ P R+ + ++ FVS+MRGCNN C +CIVP+TRGRER
Sbjct: 130 AQAEAGHKAMNIELSTSETYRDVVPERVCGSKLSGFVSIMRGCNNFCHYCIVPYTRGRER 189
Query: 262 SRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKV 321
SR VESI++EV +L + KEVTLLGQNVNSY W+ E
Sbjct: 190 SRDVESILREVADLHDKHFKEVTLLGQNVNSYC--------------WQADE-------- 227
Query: 322 KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNS 381
+ + F LL R++ FP+MR R+ +PHPKD DE L+++ + PNVC++IHLP Q+G++
Sbjct: 228 QSEAVNFPGLLRRVARAFPDMRIRFVTPHPKDMSDETLHVIAEEPNVCRHIHLPVQSGSN 287
Query: 382 AVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYD 441
+L+ M R YTRE YLD V IR+I+P+ GLS+D G+C ET E+H ++L+LM+ VGYD
Sbjct: 288 RILKLMNRKYTREWYLDRVAAIRRIVPECGLSTDIFVGYCSETPEDHQESLSLMEEVGYD 347
Query: 442 MAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVE 501
A+MF YS R T+A ++ DD+ E VK RL ELI + + G V VL+E
Sbjct: 348 SAFMFKYSERPGTYASKHLPDDISEAVKVERLEELIALQNRKSAEANRRCEGKVYEVLIE 407
Query: 502 GPNKKAPDTELVGKSDRGHRVAF 524
G +K++ D +L G++++ V F
Sbjct: 408 GTSKRSRD-QLFGRTEQNKVVIF 429
>gi|332881524|ref|ZP_08449173.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|357045600|ref|ZP_09107235.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paraprevotella clara YIT
11840]
gi|332680522|gb|EGJ53470.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|355531462|gb|EHH00860.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paraprevotella clara YIT
11840]
Length = 441
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/447 (45%), Positives = 284/447 (63%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+M+ AGY E + A+ +F+NTC++RD AE K+ RL
Sbjct: 3 KLFIETYGCQMNVADSEVVASVMRMAGY-ETCETLDEADAVFLNTCSVRDNAEQKIINRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
L+R+ + + I VLGCMAER+K+++++ + VDVV GPDAY L
Sbjct: 62 EALHALRRKGRHLI------------IGVLGCMAERVKEELIE-NHHVDVVAGPDAYLSL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ +V+ G K IN LS+ ETY D+ P R+ + ++ FVS+MRGCNN C +CIVP+TR
Sbjct: 109 PDLIAQVELGHKAINVELSVTETYKDVIPQRVCGSHISGFVSIMRGCNNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L K G KEVTLLGQNVNSY + GA+ +
Sbjct: 169 GRERSRDVESILNEVRDLKKRGYKEVTLLGQNVNSY---------LHEGADGKT------ 213
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ F +LL ++ E MR R+T+ HPKD D+ L ++ + PNVC++IHLP Q
Sbjct: 214 --------VSFPELLRLVAHEADGMRVRFTTSHPKDMSDDTLRVIAEEPNVCRHIHLPVQ 265
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ +L+ M R YTRE YLD V IR+I+PD GLS+D G+C ETEE+H +L+LM+
Sbjct: 266 SGSNRILKLMNRKYTREWYLDRVAAIRRIVPDCGLSTDIFSGYCSETEEDHQMSLSLMRE 325
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
YD A+MF YS R T+A ++ DDV E+VK RRL ELI E + + G V
Sbjct: 326 CAYDSAFMFKYSERPGTYASKHLPDDVSEDVKVRRLNELIALQNELSAESNRRCEGRVYE 385
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ + +L G++++ V F
Sbjct: 386 VLVEGVSKRSKE-QLFGRTEQNKVVVF 411
>gi|298206730|ref|YP_003714909.1| SAM/TRAM family methylase [Croceibacter atlanticus HTCC2559]
gi|83849361|gb|EAP87229.1| putative SAM/TRAM family methylase protein [Croceibacter atlanticus
HTCC2559]
Length = 482
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 284/448 (63%), Gaps = 25/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D EIV SIM G++ N+ E+A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLFIESYGCAMNFSDSEIVASIMAKEGFNTTPNL-EDADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR+ N+ G VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRDHNPNMKVG-----------VLGCMAERLKSKFLEEEKIVDLVVGPDAYKDL 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L++EV+ G+ +N +LS +ETY D+SPVR+ N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLIKEVEEGRDAVNVILSKDETYGDVSPVRLQTNGVSAFVSITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI+ EV L + G KE+TLLGQNV+SY GM+K+
Sbjct: 193 GRERSRDPQSILDEVRNLSENGYKEITLLGQNVDSYLWYGGGMKKDFSKAT--------- 243
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
M + G F LL ++ FP MR R+++ +P+D ++++ M N+CK+IHLP
Sbjct: 244 PMQQATATG--FPQLLKMVAETFPNMRIRFSTSNPQDMTEDVIKTMAAYSNICKHIHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TRE Y L+ IR +PD +S D I GF ETE++H DTL+LM+
Sbjct: 302 QSGSDRILKEMNRLHTREEYFSLIDTIRAYMPDCSISQDMIIGFPTETEQDHKDTLSLME 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YM+ YS R T A R DDVPEEVK+RRL+E++ R+ + + +G
Sbjct: 362 KVQYNFGYMYKYSERPGTMAGRKMEDDVPEEVKKRRLSEVVALQRQLSQLQTEKNIGKTV 421
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +KK+ D E G++ + F
Sbjct: 422 EVLVERESKKS-DKEWSGRTSQNAVAVF 448
>gi|336403499|ref|ZP_08584214.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Bacteroides
sp. 1_1_30]
gi|295085878|emb|CBK67401.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacteroides xylanisolvens
XB1A]
gi|335945829|gb|EGN07636.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Bacteroides
sp. 1_1_30]
Length = 460
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/447 (46%), Positives = 281/447 (62%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+NTC+IRD AE K+ RL
Sbjct: 21 KLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMNTCSIRDNAEQKILNRL 79
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+F LK++ K + + VLGCMAER+KD ++ + VD+V GPDAY L
Sbjct: 80 EFFHSLKKKKKHLI------------VGVLGCMAERVKDDLI-TNHHVDLVVGPDAYLTL 126
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+MRGCNN C++CIVP+TR
Sbjct: 127 PDLIAAVETGEKAINVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIVPYTR 186
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L +G KEVTLLGQNVNSY R
Sbjct: 187 GRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSY----------------RFERPTGE 230
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ + F LL ++ P +R R+T+ HPKD DE L ++ PNVCK+IHLP Q
Sbjct: 231 V-------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQ 283
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M R YTRE YLD V I++IIPD GL++D GF ETEE+HA +L+LM+
Sbjct: 284 SGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSGFHSETEEDHALSLSLMEE 343
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
GYD A+MF YS R T+A ++ D+VPEEVK RRL E+I + + +G
Sbjct: 344 CGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEIIALQNRLSAESNQRCIGKTYE 403
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ D +L G++++ V F
Sbjct: 404 VLVEGVSKRSRD-QLFGRTEQNRVVVF 429
>gi|237722101|ref|ZP_04552582.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293371177|ref|ZP_06617713.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides ovatus SD CMC
3f]
gi|299145161|ref|ZP_07038229.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 3_1_23]
gi|229448970|gb|EEO54761.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292633738|gb|EFF52291.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides ovatus SD CMC
3f]
gi|298515652|gb|EFI39533.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 3_1_23]
Length = 457
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/447 (46%), Positives = 281/447 (62%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+NTC+IRD AE K+ RL
Sbjct: 21 KLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMNTCSIRDNAEQKILNRL 79
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+F LK++ K + + VLGCMAER+KD ++ + VD+V GPDAY L
Sbjct: 80 EFFHSLKKKKKHLI------------VGVLGCMAERVKDDLI-TNHHVDLVVGPDAYLTL 126
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+MRGCNN C++CIVP+TR
Sbjct: 127 PDLIAAVETGEKAINVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIVPYTR 186
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L +G KEVTLLGQNVNSY R
Sbjct: 187 GRERSRDVESILNEVADLVTKGYKEVTLLGQNVNSY----------------RFERPTGE 230
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ + F LL ++ P +R R+T+ HPKD DE L ++ PNVCK+IHLP Q
Sbjct: 231 V-------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQ 283
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M R YTRE YLD V I++IIPD GL++D GF ETEE+HA +L+LM+
Sbjct: 284 SGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSGFHSETEEDHALSLSLMEE 343
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
GYD A+MF YS R T+A ++ D+VPEEVK RRL E+I + + +G
Sbjct: 344 CGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEIIALQNRLSAESNQRCIGKTYE 403
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ D +L G++++ V F
Sbjct: 404 VLVEGVSKRSRD-QLFGRTEQNRVVVF 429
>gi|423290887|ref|ZP_17269736.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides ovatus CL02T12C04]
gi|423293833|ref|ZP_17271960.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides ovatus CL03T12C18]
gi|392664752|gb|EIY58289.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides ovatus CL02T12C04]
gi|392677791|gb|EIY71207.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides ovatus CL03T12C18]
Length = 460
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/447 (46%), Positives = 281/447 (62%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+NTC+IRD AE K+ RL
Sbjct: 21 KLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMNTCSIRDNAEQKILNRL 79
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+F LK++ K + + VLGCMAER+KD ++ + VD+V GPDAY L
Sbjct: 80 EFFHSLKKKKKHLI------------VGVLGCMAERVKDDLI-TNHHVDLVVGPDAYLTL 126
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+MRGCNN C++CIVP+TR
Sbjct: 127 PDLIAAVETGEKAINVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIVPYTR 186
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L +G KEVTLLGQNVNSY R
Sbjct: 187 GRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSY----------------RFERPTGE 230
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ + F LL ++ P +R R+T+ HPKD DE L ++ PNVCK+IHLP Q
Sbjct: 231 V-------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQ 283
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M R YTRE YLD V I++IIPD GL++D GF ETEE+HA +L+LM+
Sbjct: 284 SGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSGFHSETEEDHALSLSLMEE 343
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
GYD A+MF YS R T+A ++ D+VPEEVK RRL E+I + + +G
Sbjct: 344 CGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEIIALQNRLSAESNQRCIGKTYE 403
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ D +L G++++ V F
Sbjct: 404 VLVEGVSKRSRD-QLFGRTEQNRVVVF 429
>gi|423300993|ref|ZP_17279017.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides finegoldii CL09T03C10]
gi|408472328|gb|EKJ90856.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides finegoldii CL09T03C10]
Length = 512
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/463 (45%), Positives = 288/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 58 GADFKSATADD---SKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 113
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ K + + VLGCMAER+KD ++
Sbjct: 114 TCSIRDNAEQKILNRLEFFHSLKKKKKHLI------------VGVLGCMAERVKDDLI-T 160
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 161 NHHVDLVVGPDAYLTLPDLIAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIM 220
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 221 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK 276
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 277 ---PTGET----------------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLEV 317
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++IIPD GL++D GF
Sbjct: 318 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSGFH 377
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+HA +L+LM+ GYD A+MF YS R T+A ++ D+VPEEVK RRL E+I
Sbjct: 378 SETEEDHAMSLSLMEECGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEIIALQN 437
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ D +L G++++ V F
Sbjct: 438 RLSAESNQRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 479
>gi|336412992|ref|ZP_08593345.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Bacteroides
ovatus 3_8_47FAA]
gi|335943038|gb|EGN04880.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Bacteroides
ovatus 3_8_47FAA]
Length = 457
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/447 (46%), Positives = 281/447 (62%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+NTC+IRD AE K+ RL
Sbjct: 21 KLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMNTCSIRDNAEQKILNRL 79
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+F LK++ K + + VLGCMAER+KD ++ + VD+V GPDAY L
Sbjct: 80 EFFHSLKKKKKHLI------------VGVLGCMAERVKDDLI-TNHHVDLVVGPDAYLTL 126
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+MRGCNN C++CIVP+TR
Sbjct: 127 PDLIAAVETGEKAINVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIVPYTR 186
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L +G KEVTLLGQNVNSY R
Sbjct: 187 GRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSY----------------RFERPTGE 230
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ + F LL ++ P +R R+T+ HPKD DE L ++ PNVCK+IHLP Q
Sbjct: 231 V-------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQ 283
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M R YTRE YLD V I++IIPD GL++D GF ETEE+HA +L+LM+
Sbjct: 284 SGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSGFHSETEEDHALSLSLMEE 343
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
GYD A+MF YS R T+A ++ D+VPEEVK RRL E+I + + +G
Sbjct: 344 CGYDAAFMFKYSERPGTYASKHLEDNVPEEVKVRRLNEIIALQNRLSAESNQRCIGKTYE 403
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ D +L G++++ V F
Sbjct: 404 VLVEGVSKRSRD-QLFGRTEQNRVVVF 429
>gi|393782574|ref|ZP_10370757.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides salyersiae CL02T12C01]
gi|392672801|gb|EIY66267.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides salyersiae CL02T12C01]
Length = 457
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/463 (44%), Positives = 288/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGY V + A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYG-VAGSLDEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ KKN+ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKK-KKNLIVG-----------VLGCMAERVKDDLIEH 109
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 110 HH-VDLVVGPDAYLTLPELVASVEAGEKAINVDLSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KE+TLLGQNVNSY +
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVTKGYKEITLLGQNVNSYR-FEKQDG 227
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
EV + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 228 EV----------------------VTFPMLLRIVAEAAPGVRIRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R Y RE YL+ V I++IIPD GL++D GF
Sbjct: 266 IAQMPNVCKHIHLPVQSGSSRILKLMNRKYNREWYLERVDAIKRIIPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+ GYD A+MF YS R T+A ++ D+VPEEVK RRL E+I
Sbjct: 326 SETEEDHQESLSLMEICGYDAAFMFKYSERPGTYASKHLEDNVPEEVKIRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ + +L G++++ V F
Sbjct: 386 RLSAESNARCIGKTYEVLVEGVSKRSRE-QLFGRTEQNRVVVF 427
>gi|332299874|ref|YP_004441795.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Porphyromonas asaccharolytica DSM 20707]
gi|332176937|gb|AEE12627.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Porphyromonas asaccharolytica DSM 20707]
Length = 450
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/447 (44%), Positives = 279/447 (62%), Gaps = 37/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R++ ETYGCQMNV D EI+ + M+ AGY + E A+ + INTC++RD AE ++ RL
Sbjct: 11 RVFIETYGCQMNVADSEIIAAQMQLAGYQLTDQIDE-ADAVLINTCSVRDNAEQRIIHRL 69
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ N+ R +S HP + VLGCMAER+++ ++ D VD+V GPDAY DL
Sbjct: 70 D-----------NLNGQRRRSGHPQIVGVLGCMAERVRETLIQ-DHGVDLVAGPDAYTDL 117
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ + G+ I+ LS ETY+D+ PVR+ ++ FVS+MRGC+N C++CIVP+TR
Sbjct: 118 PHLIAAAEAGEPAISIELSKSETYSDVIPVRLPGLHISGFVSIMRGCDNFCTYCIVPYTR 177
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR ESIV+EV + +EG +EVTLLGQNVNSY W+ G
Sbjct: 178 GRERSRDPESIVREVQRMAQEGYREVTLLGQNVNSYC--------------WQSETG--- 220
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ FADLL +++ P MR R+TSPHPKD DE L +M PN+C++IH P Q
Sbjct: 221 ------VSYTFADLLRKVAEAVPTMRIRFTSPHPKDMKDETLEVMSLYPNICRHIHFPLQ 274
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ +LERM R YTRE YL+ V++IR +PD GLS+D CGF GETEE+ +TL +M+
Sbjct: 275 SGSNRILERMHRRYTREWYLERVERIRDYMPDCGLSTDVFCGFSGETEEDFQETLEVMRQ 334
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
D A+MF YS R T+A R+ VDDVPEEVK RL +I E + + + V
Sbjct: 335 ARLDSAFMFKYSERPGTYASRHLVDDVPEEVKVERLNRMIALQNELSLESNERDVDKSFE 394
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +K++ D + G++ + + F
Sbjct: 395 VLIEGYSKRSHD-DFFGRTQQNKVIVF 420
>gi|410095997|ref|ZP_11290988.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides goldsteinii CL02T12C30]
gi|409227403|gb|EKN20301.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Parabacteroides goldsteinii CL02T12C30]
Length = 456
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/454 (43%), Positives = 292/454 (64%), Gaps = 39/454 (8%)
Query: 71 SEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAE 130
+ + + +++ ETYGCQMNV D E+V SIMK GY+ + + E+A+ +F+NTC++RD AE
Sbjct: 13 TAANEEKKLFIETYGCQMNVADSEVVASIMKMDGYT-LTDKIEDADAVFVNTCSVRDNAE 71
Query: 131 HKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCG 190
KV+ RL YF LKR+ KK++ G VLGCMAER+K+++++ D+V G
Sbjct: 72 QKVYGRLQYFQSLKRK-KKSLIVG-----------VLGCMAERVKEELINVHH-ADLVVG 118
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
PD+Y DLP L+ V++G+K IN LS +ETY D+ P+++ ++ FVS+MRGCNN C++
Sbjct: 119 PDSYMDLPNLVGAVEHGEKAINVELSTQETYKDVMPLKLGGVHISGFVSIMRGCNNFCTY 178
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
CIVP+TRGRERSR VESI+ E+ ++ +G KE TLLGQNVNSY EK+ E
Sbjct: 179 CIVPYTRGRERSRDVESILNEIRDMRDKGFKEATLLGQNVNSY----AFEKDGET----- 229
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ F LL+R++LE P MR R+ + HPKD D+ L ++ N+CK
Sbjct: 230 ---------------VTFPMLLERVALEAPNMRIRFVTSHPKDMSDDTLRVIAAHNNICK 274
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
YIHLPAQ+G+S +L+ M R YTRE YLD + IR+I+P+ +++D CGF ETEE++ +
Sbjct: 275 YIHLPAQSGSSKILKVMNRKYTREWYLDRIAAIRRIVPEASIATDLFCGFHSETEEDYQE 334
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL+LM+ V YD A++F YS R T+A ++ D V EE K RRL +I+ + + +
Sbjct: 335 TLSLMREVRYDAAFLFKYSERPGTYAAKHLPDTVSEEEKVRRLQGMIDLQNQLSEESNLR 394
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G VL+EG +K++ + +L G++ + V F
Sbjct: 395 DIGKEFEVLIEGFSKRSRE-QLFGRTSQNKVVIF 427
>gi|149369934|ref|ZP_01889785.1| 2-methylthioadenine synthetase [unidentified eubacterium SCB49]
gi|149356425|gb|EDM44981.1| 2-methylthioadenine synthetase [unidentified eubacterium SCB49]
Length = 479
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/448 (43%), Positives = 283/448 (63%), Gaps = 25/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D EIV SI+ G++ E A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLFIESYGCAMNFSDSEIVASILSEQGFN-TTQTLEEADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR+ + G VLGCMAERLK+K LD +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRDINPKMKVG-----------VLGCMAERLKEKFLDEEKIVDMVVGPDAYKDL 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G +N +LS +ETY DI+PVR++ N + A VS+ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLLAEVEAGNDAVNVVLSKDETYGDIAPVRLNTNGINALVSITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI+ E+ +L G KEVTLLGQNV+SY G++K+ + N
Sbjct: 193 GRERSRDPKSILDEISKLANSGYKEVTLLGQNVDSYLWYGGGLKKDYK-----------N 241
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ K F+ LLD ++ PEMR R+++ +P+D +E+ ++M N+CK++HLP
Sbjct: 242 ATEMEKATATSFSQLLDLVASAQPEMRIRFSTSNPQDMTEEVFHVMAKHKNICKHVHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +T E YL LV ++ +IIP+ +S D I GF ETE++H DTL LM+
Sbjct: 302 QSGSNRILKEMNRQHTVEEYLALVNRMWEIIPEASISQDMIIGFPSETEQDHKDTLDLME 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V + YM+ YS R T A R + DDVPE K+RRL E+++ R+ VG V
Sbjct: 362 KVKFSFGYMYKYSERPGTMAARKFEDDVPEATKKRRLQEIVDQQRKDAAYRTQQFVGKVT 421
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK PD + G++++ V F
Sbjct: 422 EVLIEKVSKKNPD-QWSGRNEQSIGVVF 448
>gi|347536792|ref|YP_004844217.1| putative TRNA-i(6)A37 modification protein MiaB [Flavobacterium
branchiophilum FL-15]
gi|345529950|emb|CCB69980.1| Probable TRNA-i(6)A37 modification enzyme MiaB [Flavobacterium
branchiophilum FL-15]
Length = 481
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 292/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y E+YGC MN D EIV SI+ GY+ + E A+++ +NTC+IRD AE + +RL
Sbjct: 25 KLYIESYGCAMNFADSEIVASILLENGYNTTSELEE-ADLVLVNTCSIRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR+ SQ K + VLGCMAERLK++ L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRK--------NSQMK----VGVLGCMAERLKNQFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL+EV+ G++ IN +LS EETY DISPVR+ N VTAFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLLKEVESGREAINVILSKEETYGDISPVRLMSNGVTAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI+KE+ +L + KE+TLLGQNV+SY G++K+ ++ +
Sbjct: 192 GRERSRDPQSILKEILDLQNKNYKEITLLGQNVDSYLWYGGGLKKDFVNASDMQ------ 245
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K + F LL+ ++ FP++R R+++ +P+D D +L+++ N+CK+IHLP
Sbjct: 246 -----KATAVGFDQLLEMVATTFPKLRIRFSTSNPQDMHDNVLHVIAKYDNICKHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y+ L++KI QIIP+ ++ D I GF ETE +H DTL LM+
Sbjct: 301 QSGSNRILKAMNRLHTREEYIGLIRKIEQIIPNCAVTQDLIAGFPTETEADHQDTLHLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
+V Y YM+AYS R T A R DDVPE VK RRL E+++ R +G +G
Sbjct: 361 SVKYSFGYMYAYSERPGTLAGRKMEDDVPETVKLRRLQEIVDLQRIHSGFRTQEFLGQTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK+ + + G++ + V F
Sbjct: 421 EVLIEKTSKKS-ENDWSGRNSQSIMVVF 447
>gi|429739623|ref|ZP_19273372.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella saccharolytica
F0055]
gi|429156280|gb|EKX98914.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella saccharolytica
F0055]
Length = 438
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/448 (43%), Positives = 288/448 (64%), Gaps = 41/448 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY E+ +A+ IF+NTC++R+ AE+K+++RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-ELCENEADADAIFMNTCSVRENAENKIYRRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ ++ + + VLGCMAER+KD +L+ + +V GPD+Y +L
Sbjct: 62 DTLHAEQKKGRRVI------------LGVLGCMAERVKDDLLE-NHHAQLVAGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G K I+ LS ETY D+ P R++ ++ FVS+MRGC+N C +CIVP+TR
Sbjct: 109 PDMIAQAEAGHKAIDIELSKTETYKDVIPQRVALAKISGFVSIMRGCDNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR V SI+ EV +L ++G KEVTLLGQNVNSY
Sbjct: 169 GRERSRDVTSIINEVLDLQRQGYKEVTLLGQNVNSY------------------------ 204
Query: 318 MCKVKKMG-LRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
C V + G + F LL ++ P MR R+++PHPKD DE L+++ + PNVC++IHLP
Sbjct: 205 -CFVGEEGEITFPRLLRIIAETVPTMRIRFSTPHPKDMSDETLHVIAEVPNVCRHIHLPI 263
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ VL+ M R YT E YLD VQ IR I+PD GLS+D G+ ETEE+H +L +M+
Sbjct: 264 QSGSDKVLKLMNRRYTVEWYLDRVQAIRNIVPDCGLSTDIFVGYHDETEEDHQQSLDIMR 323
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGYD A+MF YS R T+A ++ D+VPEEVK RRL ELI+ E++ + G ++
Sbjct: 324 RVGYDSAFMFKYSERPGTYASKHLPDNVPEEVKIRRLNELIQVQNENSALANKQEEGRIR 383
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+K++ + +L G++++ V F
Sbjct: 384 EVLVEGPSKRSRE-QLCGRTEQNKMVVF 410
>gi|402846548|ref|ZP_10894860.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Porphyromonas sp. oral
taxon 279 str. F0450]
gi|402267949|gb|EJU17339.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Porphyromonas sp. oral
taxon 279 str. F0450]
Length = 466
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/469 (43%), Positives = 296/469 (63%), Gaps = 42/469 (8%)
Query: 56 LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENA 115
+ + PA +T + R+Y ETYGCQMNV D E+V SIM+ G+ + PE A
Sbjct: 1 MTKIEPAQSAQPSTAT----ARRVYIETYGCQMNVADSEVVASIMQMDGF-HLTEDPELA 55
Query: 116 EVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLK 175
+ IF+NTC++RD AE KV R+ Y+ ++R+ ++ + G VLGCMAER K
Sbjct: 56 DAIFLNTCSVRDNAEQKVLNRIAYYHSIRRKKRRRIIIG-----------VLGCMAERAK 104
Query: 176 DKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVT 235
++++ VD+V GPD+Y DLP L+ V+ G+K IN LS ETY D+ P++I +++
Sbjct: 105 GELIEKHH-VDLVVGPDSYLDLPNLVGAVERGEKAINVQLSTTETYKDVLPLKIGGLNLS 163
Query: 236 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYND 295
FVS+MRGCNN CS+CIVP+TRGRERSR +ESI++EV +L +G +E+TLLGQNVNSY
Sbjct: 164 GFVSIMRGCNNFCSYCIVPYTRGRERSRELESIIREVKDLEAKGYREITLLGQNVNSY-- 221
Query: 296 TSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFP 355
R +G + F DLL++++L P++R R+TSPHPKD
Sbjct: 222 --------------RFVDGDRT--------YDFGDLLEQVALAVPKIRIRFTSPHPKDMD 259
Query: 356 DELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSD 415
D+ + +M PN+CK+IHLPAQ+GN +L+ M+R YTRE YL+ V IR+ +PD ++SD
Sbjct: 260 DKAIAMMAKYPNICKHIHLPAQSGNDRILKLMKRNYTREWYLERVAAIRRAMPDCAITSD 319
Query: 416 FICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTE 475
CGF E+EE+ DTL+LM+ V YD A++F YS R T+A + +D++PEE K RRL E
Sbjct: 320 IFCGFHDESEEDFQDTLSLMREVVYDNAFLFKYSERPGTYAAKYLIDNIPEEEKIRRLNE 379
Query: 476 LIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+IE + + + VG VL+EG +K++ + +L G++ + V F
Sbjct: 380 MIELQTQLSLESNLRDVGKTFEVLIEGFSKRSRE-QLFGRNQQNKVVVF 427
>gi|383115697|ref|ZP_09936452.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides sp. D2]
gi|313694899|gb|EFS31734.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides sp. D2]
Length = 460
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/468 (44%), Positives = 287/468 (61%), Gaps = 45/468 (9%)
Query: 57 ADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAE 116
AD A+E++ +++ ETYGCQMNV D E++ S+M+ AGYS V E A+
Sbjct: 7 ADFKSATEMND-------DNKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEAD 58
Query: 117 VIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKD 176
+F+NTC+IRD AE K+ RL +F LK++ K + + VLGCMAER+KD
Sbjct: 59 AVFMNTCSIRDNAEQKILNRLEFFHSLKKKKKHLI------------VGVLGCMAERVKD 106
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTA 236
++ + VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++
Sbjct: 107 DLI-TNHHVDLVVGPDAYLTLPDLIAAVETGEKAINVELSTTETYRDVIPSRICGNHISG 165
Query: 237 FVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDT 296
FVS+MRGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY
Sbjct: 166 FVSIMRGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSY--- 222
Query: 297 SGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPD 356
R + + F LL ++ P +R R+T+ HPKD D
Sbjct: 223 -------------RFERPTGEV-------VTFPMLLRTVAEAAPGVRIRFTTSHPKDMSD 262
Query: 357 ELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDF 416
E L ++ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++IIPD GL++D
Sbjct: 263 ETLEVIAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDI 322
Query: 417 ICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
GF ETEE+HA +L+LM+ GYD A+MF YS R T+A ++ D+V EEVK RRL E+
Sbjct: 323 FSGFHSETEEDHALSLSLMEECGYDAAFMFKYSERPGTYASKHLEDNVSEEVKVRRLNEI 382
Query: 477 IEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
I + + +G VLVEG +K++ D +L G++++ V F
Sbjct: 383 IALQNRLSAESNQRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 429
>gi|393785907|ref|ZP_10374051.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides nordii CL02T12C05]
gi|392661021|gb|EIY54618.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bacteroides nordii CL02T12C05]
Length = 457
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/465 (44%), Positives = 293/465 (63%), Gaps = 43/465 (9%)
Query: 65 VSSATGSEVHS-----QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
+S TG++ S +++ ETYGCQMNV D E++ S+M+ AGYS V + + A+ +F
Sbjct: 1 MSELTGADFKSATADDNKKLFIETYGCQMNVADSEVIASVMQMAGYS-VADSLDEADAVF 59
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
+NTC+IRD AE K+ RL +F LK++ K + + VLGCMAER+KD ++
Sbjct: 60 MNTCSIRDNAEQKILNRLEFFHSLKKKKKHLI------------VGVLGCMAERVKDDLI 107
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS 239
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY ++ P RI N ++ FVS
Sbjct: 108 E-HHHVDLVVGPDAYLTLPELIASVEAGEKAINVELSTTETYREVIPSRICGNHISGFVS 166
Query: 240 VMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGM 299
+MRGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KE+TLLGQNVNSY
Sbjct: 167 IMRGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEITLLGQNVNSYR----F 222
Query: 300 EKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELL 359
E+E N + + F LL ++ P +R R+T+ HPKD DE L
Sbjct: 223 ERE-----NGEV--------------ITFPMLLRTVAEAAPGVRIRFTTSHPKDMSDETL 263
Query: 360 YIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICG 419
++ NVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++IIPD GL++D G
Sbjct: 264 EVIAQVSNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSG 323
Query: 420 FCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEA 479
F ETEE+H ++L+LM+A GYD A+MF YS R T+A ++ D+VPE+VK RRL E+I
Sbjct: 324 FHSETEEDHQESLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEDVKVRRLNEIIAL 383
Query: 480 FRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G V VLVEG +K++ + +L G++++ V F
Sbjct: 384 QNRLSAESNARCIGNVYEVLVEGVSKRSRE-QLFGRTEQNRVVVF 427
>gi|261878931|ref|ZP_06005358.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella bergensis DSM
17361]
gi|270334514|gb|EFA45300.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella bergensis DSM
17361]
Length = 452
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/439 (45%), Positives = 284/439 (64%), Gaps = 26/439 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY E+ + + A+ IF+NTC+IR+ AE+K++ RL
Sbjct: 4 KLYIETYGCQMNVADSEVVASVMKMAGY-ELTDNEDEADAIFLNTCSIRENAENKIYHRL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ L E +K ++ P + VLGCMAER+KD ++ + ++VCGPDAY +L
Sbjct: 63 DA---LHAEQRKRAVETQNPKCPTPILGVLGCMAERVKDDLV-KNHHANLVCGPDAYLNL 118
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ V+ GQ+ ++ LS ETY DI P RI N ++ FVS+MRGCNN C +CIVPFTR
Sbjct: 119 PEMIAAVEMGQEAVDVQLSTTETYRDIIPQRIGGNRISGFVSIMRGCNNFCHYCIVPFTR 178
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+KEV +L +G KEVTLLGQNVNSY G
Sbjct: 179 GRERSRDVESILKEVHDLHDKGFKEVTLLGQNVNSY--------------------GLLP 218
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL ++ E P+MR R+T+ +P+D ++++ + D PN+C +IH P Q
Sbjct: 219 NGKRPENGTSFAELLRLVAREVPDMRVRFTTSNPEDMTEDIIQAVADEPNLCNHIHFPVQ 278
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M R YTRE YL+ V IR+IIPD GL++D G+ ETEE+H TL LM+
Sbjct: 279 SGSSKILKLMNRKYTREDYLEKVAAIRRIIPDCGLTTDVFVGYHDETEEDHQMTLDLMRE 338
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A ++ D+VPEEVK RRL ELI+ + + + G
Sbjct: 339 VGFDSAFMFKYSERPGTYAAKHLPDNVPEEVKVRRLNELIQLQTQISAEQNKKDEGKEFE 398
Query: 498 VLVEGPNKKAPDTELVGKS 516
+L+E +K++ +L+G++
Sbjct: 399 ILLERFSKRS-RQQLMGRT 416
>gi|374596721|ref|ZP_09669725.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Gillisia limnaea DSM
15749]
gi|373871360|gb|EHQ03358.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Gillisia limnaea DSM
15749]
Length = 476
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/448 (43%), Positives = 287/448 (64%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN +D E+V SI+ G++ N+ E A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLFIESYGCQMNFSDSEVVASILLKEGFNTTQNL-EEADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRINPK------------MKVGVLGCMAERLKSKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L++EV+ G+ +N +LS EETY DISPVR+ N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLIKEVEEGRNAVNVILSKEETYGDISPVRLQSNGVSAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI++EV +L ++G KE+TLLGQNV+SY G L + F +
Sbjct: 192 GRERSRDPQSILEEVRDLAEKGYKEITLLGQNVDSYLWYGG-----------GLKKDFKT 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K F +LL ++ P MR R+++ +P+D +++ +M N+C +IHLP
Sbjct: 241 ASEIQKATATNFTNLLKMVAEAQPHMRIRFSTSNPQDMTLDVIELMSRYKNICNHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y L+ IR+I+PD +S D I GF ETEE+H DTL+L+
Sbjct: 301 QSGSNRILKEMNRLHTREEYFTLIDNIRKILPDCSISQDLIIGFPTETEEDHWDTLSLLD 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YM++YS R T A R DDVPEE+K+RRL E++ R+ + +G
Sbjct: 361 YVKYDFGYMYSYSDRPGTMASRKLEDDVPEEIKKRRLAEIVAVQRKHSLYRTQEFLGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK+ D E G++ + F
Sbjct: 421 EVLIEKESKKS-DLEWSGRTQQNTVAVF 447
>gi|393907785|gb|EJD74780.1| tRNA-I(6)A37 thiotransferase enzyme MiaB, variant [Loa loa]
Length = 415
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/354 (53%), Positives = 252/354 (71%), Gaps = 9/354 (2%)
Query: 170 MAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRI 229
MAER++ +L + VDVV GPD+YRDLPRLL G IN LSLEETYADI PVR
Sbjct: 1 MAERVRHNLLTYTENVDVVAGPDSYRDLPRLLAIARCGSMAINVQLSLEETYADIVPVRK 60
Query: 230 SKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQN 289
K S TAFVS+MRGC+NMC++C+VP+TRGRERSRP+ SI+ E+ L EGVK+VTLLGQN
Sbjct: 61 DKFSKTAFVSIMRGCDNMCTYCVVPYTRGRERSRPINSILDEIRSLSDEGVKQVTLLGQN 120
Query: 290 VNSYNDTSGMEKE----VEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFR 345
VNSY D S + EPG + GF + K KK G F LLD++S PEMR R
Sbjct: 121 VNSYRDLSEISFPSACLTEPGT----APGFRTKYKPKKGGRTFLTLLDKVSQIDPEMRIR 176
Query: 346 YTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQ 405
+TSPHPKDFP E++ ++++R N+CK IHLPAQ+G++AVL+ M RGY+RE+YL+LV +I+
Sbjct: 177 FTSPHPKDFPLEVIQLIKERSNICKQIHLPAQSGSNAVLDAMDRGYSRESYLELVDRIKA 236
Query: 406 IIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVP 465
++P+V L+SDFI GFCGETEE H ++L L++ V Y Y+F YS RE+T A+R+ D+V
Sbjct: 237 VLPNVSLTSDFIAGFCGETEESHRESLDLIRHVVYSFCYVFPYSQREKTKAYRHLKDNVS 296
Query: 466 EEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRG 519
+EVK RR EL FRE+ + ++ VGT QLVL+E +K++ + L G+ D G
Sbjct: 297 KEVKNRRHQELANVFRETALKHNEALVGTEQLVLLEETSKRSSE-HLRGRIDGG 349
>gi|429725786|ref|ZP_19260603.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
473 str. F0040]
gi|429148923|gb|EKX91919.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
473 str. F0040]
Length = 482
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/462 (42%), Positives = 287/462 (62%), Gaps = 34/462 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++ ETYGCQMNV D E+V S+M+ AGY ++ + A+ +F+NTC++RD AE K+ RL
Sbjct: 3 KLLIETYGCQMNVADSEVVASVMRMAGYEPCEDI-DQADAVFLNTCSVRDNAEQKIIHRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
L+++ ++ + + VLGCMAER+KD++L+ D+V GPDAY L
Sbjct: 62 QALHALRKKGRRLI------------LGVLGCMAERVKDELLEKHH-ADLVAGPDAYLSL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ + + GQK IN LSL ETY DI P R + ++ FVS+ RGCNN C FCIVP+TR
Sbjct: 109 PDLVAQAEVGQKAINIDLSLTETYGDIMPERFCGSKISGFVSITRGCNNFCHFCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR V+SI+ E +L K G KEVTLLGQNVNSY + E N L E F +
Sbjct: 169 GRERSRNVQSIINECLDLQKRGFKEVTLLGQNVNSYKAKRDASGDTER-PNSELEE-FET 226
Query: 318 MCKVKKMGLR-----------------FADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
+ K + + F +LL ++ P+MR R+++PHPKD D L
Sbjct: 227 QTRNKAIATKDIKSTEAEADFNKDYVFFPELLRTVARAVPDMRIRFSTPHPKDMSDATLR 286
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
++ + PNVC++IHLP Q+G+ +L++M R Y RE Y++ V+ I II D +S+D G+
Sbjct: 287 VIAEEPNVCRHIHLPVQSGSDVILKKMNRKYNREWYINRVKAIHDIIEDCAISTDIFAGY 346
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGETEE+H +L+LM+ VGYD ++MF YS R T+A R+ D++PEE K RRL E+IE
Sbjct: 347 CGETEEDHQLSLSLMREVGYDSSFMFKYSERPGTYASRHLEDNIPEETKIRRLNEMIELQ 406
Query: 481 RESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
E + + ++ VG +L+EG +K++ + EL G++++ V
Sbjct: 407 NELSLKANEAWVGREADILLEGVSKRSRE-ELFGRTEQNKVV 447
>gi|336172675|ref|YP_004579813.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Lacinutrix sp. 5H-3-7-4]
gi|334727247|gb|AEH01385.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Lacinutrix sp. 5H-3-7-4]
Length = 479
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/448 (43%), Positives = 282/448 (62%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D EIV SI+ GY+ + E+A+++ +NTC+IRD AE V +RL
Sbjct: 25 KLFIESYGCAMNFSDSEIVASILDEQGYNTTSKL-EDADLVLVNTCSIRDKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLK K L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRTNPK------------MKVGVLGCMAERLKSKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G IN +LS +ETY D+SPVR++ N VTAFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLLAEVEEGHDAINVVLSKDETYGDVSPVRLNSNGVTAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI++E+++LW +G KE+TLLGQNV+SY G L + F+
Sbjct: 192 GRERSRDPQSIIEEINDLWSKGYKEITLLGQNVDSYLWYGG-----------GLKKDFSK 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
++K + F+ LL + P+MR R+++ +P+D E++ M N+C +IHLP
Sbjct: 241 ASDIQKATAVDFSKLLQICAEAQPKMRIRFSTSNPQDMSLEVIKTMAKYKNICNHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +TR+ Y L+ I+ IIPD +S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSDRILKAMNRLHTRKEYFTLIDNIKTIIPDCAISQDMIAGFPTETEEDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YMF YS R T A R DD+PE VK RRL E+IE + + +G
Sbjct: 361 YVKYNFGYMFTYSERPGTLAERKLDDDIPEAVKSRRLKEIIELQLKHSELRTREHLGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK+ + + G++++ F
Sbjct: 421 EVLIERESKKSKE-QWSGRTEKNLVAVF 447
>gi|228471151|ref|ZP_04055970.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Porphyromonas uenonis
60-3]
gi|228307091|gb|EEK16165.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Porphyromonas uenonis
60-3]
Length = 452
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 279/447 (62%), Gaps = 37/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R+Y ETYGCQMNV D EI+ + M+ AGY + E A+ + INTC++RD AE ++ +RL
Sbjct: 11 RVYIETYGCQMNVADSEIIAAQMQLAGYQLTDQIDE-ADAVLINTCSVRDNAELRIVRRL 69
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ N+ R +S HP + VLGCMAER+++ ++ + VD+V GPDAY DL
Sbjct: 70 D-----------NLNGQRRRSGHPQIVGVLGCMAERVQETLIQ-NHGVDLVAGPDAYTDL 117
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ + G+ I+ LS ETY+D+ P+R+ ++ FVS+MRGC+N C++CIVP+TR
Sbjct: 118 PHLIAAAEAGEPAISIELSKSETYSDVIPIRLPGLHISGFVSIMRGCDNFCTYCIVPYTR 177
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR ESI++EV + +EG +EVTLLGQNVNSY E GA++
Sbjct: 178 GRERSRDPESIIREVQRMAQEGYREVTLLGQNVNSYC------WHTETGASYT------- 224
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
FADLL ++ P MR R+TSPHPKD DE L +M N+C +IH P Q
Sbjct: 225 ----------FADLLRSVAEAVPTMRIRFTSPHPKDMKDETLEVMSRYHNICSHIHFPLQ 274
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ +LERMRR YTRE YL+ V++IR +PD GLS+D CGF GETEE+ +TL +M+
Sbjct: 275 SGSNRILERMRRRYTREWYLERVERIRDYMPDCGLSTDVFCGFSGETEEDFQETLEVMRL 334
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
D A+MF YS R T+A + VDDVPEEVK RL +I E + + + VG
Sbjct: 335 ARLDSAFMFKYSERPGTYASHHLVDDVPEEVKVERLNRMIALQNELSLESNERDVGKSFE 394
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+EG +K++ D + G++ + + F
Sbjct: 395 VLIEGYSKRSHD-DFFGRTQQNKVIVF 420
>gi|282879448|ref|ZP_06288185.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccalis ATCC
35310]
gi|281298420|gb|EFA90852.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccalis ATCC
35310]
Length = 497
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 286/448 (63%), Gaps = 30/448 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+M+ AGY E+ + E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 51 KLYIETYGCQMNVADSEVVASVMQMAGY-EICDKEEEADAIFLNTCSVRENAENKIYNRL 109
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +R+ +N+ G VLGCMAER+KD +LD + D+VCGPD+Y +L
Sbjct: 110 DSL-HAERKKGRNLILG-----------VLGCMAERVKDDLLD-NHHTDLVCGPDSYLNL 156
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G K I+ LS ETY D+ P R+ + FVS+MRGCNN C +CIVP+TR
Sbjct: 157 PDMIAQAETGNKAIDIELSKTETYKDVVPQRLLIGKIGGFVSIMRGCNNFCHYCIVPYTR 216
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI++EV +L + KE+TLLGQNVNSY + + E ++
Sbjct: 217 GRERSRDVESILREVRDLRDKHCKEITLLGQNVNSYC--------------FTIPEHLSA 262
Query: 318 MCK-VKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ + + F LL R++ E P +R R+TS HPKD D+ L ++ + PNVCK+IHLP
Sbjct: 263 TGETIPAETIDFPKLLRRVAHEVPGVRIRFTSSHPKDMSDDTLRVIAEEPNVCKHIHLPV 322
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R YT E Y+D + IR+IIPD G+S+D G+ GETEE+H +L LM+
Sbjct: 323 QSGSNKILKLMNRKYTVEWYMDRINAIRRIIPDCGISTDMFVGYHGETEEDHQQSLVLMR 382
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGYD A+MF YS R T+A ++ DDVPEE K RRL E+I E + G
Sbjct: 383 TVGYDSAFMFKYSERPGTYASKHLPDDVPEEEKIRRLNEMIHLQTELSAVSNKKDEGKTF 442
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ + +L G++++ V F
Sbjct: 443 DVLVEGFSKRSRE-QLCGRTEQNKMVVF 469
>gi|333379845|ref|ZP_08471563.1| Dimethylallyladenosine tRNA methylthiotransferase miaB
[Dysgonomonas mossii DSM 22836]
gi|332884749|gb|EGK05005.1| Dimethylallyladenosine tRNA methylthiotransferase miaB
[Dysgonomonas mossii DSM 22836]
Length = 456
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 285/447 (63%), Gaps = 37/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+M+ GY+ + + E A+ +F+NTC+IRD AE +V QRL
Sbjct: 19 KLFIETYGCQMNVADSEVVASVMQMDGYT-MTDKLEEADAVFVNTCSIRDNAEQRVIQRL 77
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+YF LKR+ K N+ G VLGCMAER+K+++ D VDVV GPDAY DL
Sbjct: 78 DYFNALKRKKKPNMIIG-----------VLGCMAERVKEELHDKHH-VDVVVGPDAYLDL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ + G K IN LS ETY D+ P+RI N ++ F+S+MRGC+ +CS+CIVP+TR
Sbjct: 126 PNLVGAAENGNKAINVQLSKTETYKDVIPLRIGGNHISGFISIMRGCDKVCSYCIVPYTR 185
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI+ E++ L +G KE TLLGQNVNSY T+ E G+
Sbjct: 186 GRERSRSPQSILNELENLRDKGFKEATLLGQNVNSYRFTN------EDGS---------- 229
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ F LL+ + P+MR R+T+ +P D DE L ++ N+CK+IHLP Q
Sbjct: 230 -------VVDFPALLEMTAKAAPKMRIRFTTSYPTDMTDETLEVIAKYDNLCKFIHLPVQ 282
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L M+R Y RE YL+ ++ I++IIP G+S+D +CGF ETEE+ +TL+LM+
Sbjct: 283 SGSSKMLNVMKRKYDREWYLNRIEAIKRIIPGCGISTDIMCGFHSETEEDQQETLSLMRE 342
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D A+MF YS R T+A + DD+PE+VK +RL E+I+ E + + VG V
Sbjct: 343 VCFDSAFMFKYSERPGTYASKKLEDDIPEDVKIKRLQEIIDLQNECSLESNKRDVGKVFE 402
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ + +L G++ + V F
Sbjct: 403 VLVEGFSKRSRE-QLFGRTSQNKVVIF 428
>gi|359405402|ref|ZP_09198171.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella stercorea DSM
18206]
gi|357558705|gb|EHJ40186.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella stercorea DSM
18206]
Length = 443
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/447 (43%), Positives = 285/447 (63%), Gaps = 35/447 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V SIM+ AGY N E A+ IF+NTC+IR+ AE+K++ RL
Sbjct: 3 KLFIETYGCQMNVADSEVVASIMQMAGYELCENEAE-ADAIFLNTCSIRENAENKIYGRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
K++ ++ + + VLGCMAER+++ ++ + ++VCGPD+Y +L
Sbjct: 62 ETLHAEKKKGRELI------------LGVLGCMAERVREDLIQ-NHFANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + GQ +N LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVP+TR
Sbjct: 109 PDMIAQCENGQNAMNIELSTTETYRDVVPQRIGGNRVSGFVSIMRGCNNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI++EV +L G KEVTLLGQNVNSY G
Sbjct: 169 GRERSRDVESILREVRDLHDRGFKEVTLLGQNVNSY--------------------GLTP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P+MR R+T+ +P+D D++LY + + PN+CK+IH PAQ
Sbjct: 209 AGKRIEGGCSFAELLHKVAQSVPDMRVRFTTSNPEDMTDDILYAVAEEPNLCKHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ +L+ M R YTRE YL+ V+ IR+IIP GLS+D G+ ET E+HA+TL+L++
Sbjct: 269 SGSTKILKLMNRKYTREQYLERVEAIRRIIPGCGLSTDLFVGYHDETPEDHAETLSLVRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+D A+MF YS R T+A ++ D+VPEEVK RL ELI E + + +G
Sbjct: 329 CQFDSAFMFKYSERPGTYAAKHLPDNVPEEVKIERLNELISLQTEVSAEQNRKDIGKTFE 388
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ +L+G++++ V F
Sbjct: 389 VLVEGYSKRSRQ-QLMGRTEQNKAVVF 414
>gi|365121624|ref|ZP_09338540.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Tannerella sp. 6_1_58FAA_CT1]
gi|363645114|gb|EHL84388.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Tannerella sp. 6_1_58FAA_CT1]
Length = 458
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/463 (42%), Positives = 294/463 (63%), Gaps = 39/463 (8%)
Query: 63 SEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINT 122
SE + +E + +++ ETYGCQMNV D E+V SIM+ GY+ + + E+A+ I +NT
Sbjct: 5 SEADFKSATEQTVEKKLFIETYGCQMNVADSEVVASIMQMDGYA-LCDSIEDADAILVNT 63
Query: 123 CAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDAD 182
C+IRD AE KV RL YF L+++ KKN+ G +LGCMAER+K+++L+
Sbjct: 64 CSIRDNAEQKVLSRLQYFNSLRKK-KKNLVIG-----------ILGCMAERVKEELLEKH 111
Query: 183 KMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMR 242
VD+V GPDAY DLP L+ V+ G+K IN LS ETY +I P RI N ++ F+S+MR
Sbjct: 112 H-VDLVVGPDAYLDLPNLIGAVEQGEKAINVDLSTTETYKNIIPKRIGGNRISGFISIMR 170
Query: 243 GCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKE 302
GCNN CS+CIVP+TRGRERSR ESI+KE+++L G KEVTLLGQNVNSY + ++
Sbjct: 171 GCNNFCSYCIVPYTRGRERSREPESILKELNDLKDRGFKEVTLLGQNVNSYIFSRPNGEK 230
Query: 303 VEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPE-MRFRYTSPHPKDFPDELLYI 361
++ F LL ++ E +R R+T+ HPKD D++LY
Sbjct: 231 ID-----------------------FPALLALVAKEAGSGIRIRFTTSHPKDMSDDILYT 267
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PN+C +IHLP Q+G++ +L+ M R YTRE YLD + IR+IIPD G+++D GF
Sbjct: 268 IAANPNICHHIHLPVQSGSNRILKLMNRKYTREWYLDRIAAIRRIIPDCGITTDMFSGFH 327
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ET+E+ A+TL+LM+ VG+D ++MF YS R T+A ++ D++ EE+K +RL ++I+
Sbjct: 328 SETDEDFAETLSLMQTVGFDASFMFKYSERPGTYASKHLPDNIAEEIKIKRLEQMIDLQN 387
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + + +G VLVEG +K++ + +L G++ + V F
Sbjct: 388 KLSAESNKRDIGKTFEVLVEGYSKRSRE-DLFGRTGQNKVVVF 429
>gi|418744000|ref|ZP_13300359.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira santarosai
str. CBC379]
gi|410795395|gb|EKR93292.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira santarosai
str. CBC379]
Length = 447
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/451 (44%), Positives = 280/451 (62%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYMETYGCQMNEYDSGIVSSLMKEAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K PK+V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPKLVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRNGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G+++VTLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLTEKGIRQVTLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FADL+ L E R R+TSPHPKDFP LL +M +P C IH
Sbjct: 214 --------KEQGRDFADLIRMLLDETNIERIRFTSPHPKDFPVHLLRLMAQQPRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V+KIR I+PDVG+++D I GF ETEEE DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVRKIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A R D+VPEE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMAQRKLPDNVPEETKSSRLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VL+E ++K+ + +L G++ G F
Sbjct: 386 RIYPVLIENTSRKS-EKQLCGRTPCGRMTVF 415
>gi|260910435|ref|ZP_05917107.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
472 str. F0295]
gi|260635511|gb|EEX53529.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
472 str. F0295]
Length = 440
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/447 (42%), Positives = 286/447 (63%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V ++M+ AGY E+ A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVAAVMQMAGY-EMCQDEAEADAIFMNTCSVRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ +K + + VLGCMAER+KD +++ + +V GPD+Y +L
Sbjct: 62 DTLHAEQKKGRKVI------------LGVLGCMAERVKDDLIE-NHHAQLVAGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G K I+ LS ETY DI P R++ ++ FVS+MRGC+N C +CIVP+TR
Sbjct: 109 PDMIAQAEAGNKAIDIALSKTETYKDIVPQRVALAKISGFVSIMRGCDNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR V+SI+ EV L ++G KEVTLLGQNVNSY + + V+
Sbjct: 169 GRERSRDVDSILNEVRNLQQQGYKEVTLLGQNVNSYRFVNDEGQTVD------------- 215
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
F LL ++ P MR R+++PHPKD D L ++ + PNVC++IHLP Q
Sbjct: 216 ----------FPQLLRLVAEAVPTMRIRFSTPHPKDMSDATLRVIAEVPNVCRHIHLPIQ 265
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ VL+ M R YT E YL V+ IR+++PD GLS+D G+ GETE +H ++L +M+
Sbjct: 266 SGSDKVLKLMNRKYTVEWYLSRVKAIRELVPDCGLSTDIFVGYHGETEADHEESLRIMRE 325
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD A+MF YS R T+A ++ DDVPE+VK RRL ELI E++ + ++VG ++
Sbjct: 326 VGYDSAFMFKYSERPGTYASKHLPDDVPEDVKIRRLNELIMVQNENSARANHAEVGNIRE 385
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+K++ + +L G++++ V F
Sbjct: 386 VLVEGPSKRSRE-QLCGRTEQNKMVVF 411
>gi|288928957|ref|ZP_06422803.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
317 str. F0108]
gi|288329941|gb|EFC68526.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
317 str. F0108]
Length = 440
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/447 (42%), Positives = 287/447 (64%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V ++M+ AGY E+ +A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVAAVMQMAGY-EMCQDEADADAIFMNTCSVRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ +K + + VLGCMAER+KD +++ + +V GPD+Y +L
Sbjct: 62 DTLHAEQKKGRKVI------------LGVLGCMAERVKDDLIE-NHHAQLVAGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G K I+ LS ETY D+ P R++ ++ FVS+MRGC+N C +CIVP+TR
Sbjct: 109 PDMIAQAEAGNKAIDIALSKTETYRDVVPKRVALAKISGFVSIMRGCDNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR V+SI+ EV L ++G KEVTLLGQNVNSY + E G
Sbjct: 169 GRERSRDVDSILNEVRNLQQQGYKEVTLLGQNVNSYQFVN------EEGQT--------- 213
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ F LL ++ P MR R+++PHPKD D L ++ + PNVC++IHLP Q
Sbjct: 214 --------IDFPQLLRLVAEAVPTMRIRFSTPHPKDMSDATLRVIAEVPNVCRHIHLPIQ 265
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ VL+ M R YT E YL V+ IR+++PD GLS+D G+ GETE +H ++L +M+
Sbjct: 266 SGSDKVLKLMNRKYTVEWYLSRVKAIRELVPDCGLSTDIFVGYHGETEADHEESLRIMRE 325
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD A+MF YS R T+A ++ DDVPE+VK RRL ELI E++ + ++VG V+
Sbjct: 326 VGYDSAFMFKYSERPGTYASKHLPDDVPEDVKIRRLNELIMVQNENSARANHAEVGNVRE 385
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+K++ + +L G++++ V F
Sbjct: 386 VLVEGPSKRSRE-QLCGRTEQNKMVVF 411
>gi|378734948|emb|CCG14146.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [uncultured Flavobacteriia
bacterium]
Length = 481
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/457 (42%), Positives = 295/457 (64%), Gaps = 26/457 (5%)
Query: 69 TGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDY 128
T + + ++Y E++GC MN +D EIV SI+ GY+ + E AE+I +NTC+IRD
Sbjct: 16 TKKVIKNDKKLYIESFGCAMNFSDSEIVASILSKKGYNTTDTIEE-AELILVNTCSIRDK 74
Query: 129 AEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVV 188
AE + +RL + LK+ K K+ VLGCMAERLK K L+ +K+VD+V
Sbjct: 75 AEQTIRKRLEKYNSLKKNNPK------------MKVGVLGCMAERLKHKFLEEEKIVDLV 122
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
GPDAY+DLP LLEEVD G+ IN LLS +ETY DISPVR++ N V+AF+S+ RGC+NMC
Sbjct: 123 VGPDAYKDLPNLLEEVDSGRNAINVLLSKDETYGDISPVRLNSNGVSAFISITRGCDNMC 182
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGA 307
+FC+VPFTRGRERSR +SI+ E+++L +G KE+TLLGQNV+SY GM+K+ +
Sbjct: 183 TFCVVPFTRGRERSRDPQSIIDELNDLAAKGFKEITLLGQNVDSYLWYGGGMKKDFTKAS 242
Query: 308 NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
+ KV +G FA LL+ ++ P++R R+++ +P+D +++ +M N
Sbjct: 243 EIQ---------KVSSIG--FAKLLELCAITQPKIRIRFSTSNPQDMSLDVITLMAKYDN 291
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
+C +IHLP Q+G+++VL+ M R ++RE YL+LV+ I+++IPD +S D I GF E++E+
Sbjct: 292 ICNHIHLPVQSGSNSVLKAMNRQHSREEYLNLVKNIKKLIPDCTISHDMIVGFPNESDED 351
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
H DT++LMK V Y +M+ YS R T A R D+V E+VK++RL E+++ + + +
Sbjct: 352 HNDTVSLMKEVVYSFGFMYKYSERPGTLAERKLEDNVEEKVKKQRLQEIVDLQQIHSLKR 411
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VL+E +KK+ D + GK++ V F
Sbjct: 412 TKEFLNKKVEVLIERQSKKS-DKQWAGKTEHNKVVVF 447
>gi|359685296|ref|ZP_09255297.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
santarosai str. 2000030832]
gi|410449721|ref|ZP_11303774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira sp. Fiocruz
LV3954]
gi|418753196|ref|ZP_13309449.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira santarosai
str. MOR084]
gi|422004550|ref|ZP_16351766.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
santarosai serovar Shermani str. LT 821]
gi|409966442|gb|EKO34286.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira santarosai
str. MOR084]
gi|410016478|gb|EKO78557.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira sp. Fiocruz
LV3954]
gi|417256728|gb|EKT86143.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
santarosai serovar Shermani str. LT 821]
gi|456875775|gb|EMF90967.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira santarosai
str. ST188]
Length = 447
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/451 (44%), Positives = 280/451 (62%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYMETYGCQMNEYDSGIVSSLMKEAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K PK+V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPKLVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRNGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G+++VTLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLTEKGIRQVTLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FADL+ L E R R+TSPHPKDFP LL +M +P C IH
Sbjct: 214 --------KEQGRDFADLIRMLLDETNIERIRFTSPHPKDFPVHLLRLMAQQPRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V+KIR I+PDVG+++D I GF ETEEE DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVRKIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A R D+VPEE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMAQRKLPDNVPEETKSSRLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +L+E ++K+ + +L G++ G F
Sbjct: 386 RIYPILIENTSRKS-EKQLCGRTPCGRMTVF 415
>gi|282880437|ref|ZP_06289144.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella timonensis
CRIS 5C-B1]
gi|281305540|gb|EFA97593.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella timonensis
CRIS 5C-B1]
Length = 451
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 289/447 (64%), Gaps = 28/447 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+M+ AGY E+ E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLFIETYGCQMNVADSEVVASVMQMAGY-ELCEQEEEADAIFLNTCSVRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +R+ +N+ G VLGCMAER+KD +L+ + D+VCGPD+Y +L
Sbjct: 62 DALH-AERKKGRNLILG-----------VLGCMAERVKDDLLN-NHHTDLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G K I+ LS ETY D+ P R+ V+ FVS+MRGCNN C +CIVP+TR
Sbjct: 109 PDMMAQAETGNKAIDIELSKTETYKDVVPQRLMIGKVSGFVSIMRGCNNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +ESI++EV +L + KE+TLLGQNVNSY T E++++ G
Sbjct: 169 GRERSRDIESILREVRDLRDKHYKEITLLGQNVNSYCFTVP-ERQLDNGET--------- 218
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ + F LL R++ E P++R R+TS HPKD D+ L+++ + PNVCK+IHLP Q
Sbjct: 219 ---IAAHTIDFPQLLRRVAHEVPDIRIRFTSSHPKDMSDDTLHVIAEEPNVCKHIHLPVQ 275
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ +L+ M R YT E Y+D ++ I++IIPD G+S+D G+ GETEE+H +L LM+
Sbjct: 276 SGSNKILKLMNRKYTVEWYMDRIRAIQRIIPDCGISTDIFVGYHGETEEDHQLSLQLMRT 335
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD A+MF YS R T+A ++ D+VPEE K RRL E+I E + G
Sbjct: 336 VGYDSAFMFKYSERPGTYASKHLPDNVPEEEKIRRLNEMIHLQTELSAISNKKDEGKEFE 395
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ + +L G++++ V
Sbjct: 396 VLVEGFSKRSRE-QLCGRTEQNKMVVL 421
>gi|421113652|ref|ZP_15574092.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira santarosai
str. JET]
gi|410800939|gb|EKS07117.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira santarosai
str. JET]
Length = 447
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/451 (44%), Positives = 280/451 (62%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYMETYGCQMNEYDSGIVSSLMKEAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K PK+V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPKLVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRSGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G+++VTLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLTEKGIRQVTLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FADL+ L E R R+TSPHPKDFP LL +M +P C IH
Sbjct: 214 --------KEQGRDFADLIRMLLDETNIERIRFTSPHPKDFPVHLLRLMAQQPRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V+KIR I+PDVG+++D I GF ETEEE DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVRKIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A R D+VPEE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMAQRKLPDNVPEETKSSRLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +L+E ++K+ + +L G++ G F
Sbjct: 386 RIYPILIENTSRKS-EKQLCGRTPCGRMTVF 415
>gi|304383561|ref|ZP_07366021.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella marshii DSM
16973]
gi|304335371|gb|EFM01641.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella marshii DSM
16973]
Length = 441
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/447 (43%), Positives = 282/447 (63%), Gaps = 37/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+M+ AGY E+ E A+ +F+NTC++R+ AE+K++ RL
Sbjct: 3 KLFIETYGCQMNVADSEVVASVMQMAGY-EMCESIEEADAVFLNTCSVRENAENKIYHRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+S KH + VLGCMAER++D +++ + D+V GPD+Y +L
Sbjct: 62 EALH------------AKSTKKHRVILGVLGCMAERVRDDLIE-NHHADLVAGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ + + GQK IN LS ETY DI P RI N ++ FVS+MRGC+N C +CIVP+TR
Sbjct: 109 PDLIAQAELGQKAINIELSKTETYRDIVPQRIMGNHISGFVSIMRGCDNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +ESIVKEV +L ++G KE+TLLGQNVNSY ++ ++G +
Sbjct: 169 GRERSRDIESIVKEVHDLQEKGFKEITLLGQNVNSYR--------------FQPADGSSE 214
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ F LL ++ FP+MR R+++PHPKD DE L+++ + PN+C +IHLP Q
Sbjct: 215 --------IGFPQLLRHVARAFPKMRVRFSTPHPKDMSDETLHVIAEEPNLCNHIHLPVQ 266
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL+ M R YT E Y D V +R+IIPD GLS+D G+ GE EE+H +L LM+
Sbjct: 267 SGSNKVLKLMNRRYTAEWYRDRVAAVRRIIPDCGLSTDIFVGYHGEEEEDHRQSLALMEE 326
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+ YD A+MF YS R T+A ++ D+VPEE+K RRL E+I+ + G +
Sbjct: 327 IVYDSAFMFKYSERPGTYASKHLPDNVPEEIKLRRLAEMIDLQTRMSAVANKKDEGKMFE 386
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +K++ +L G++ + V F
Sbjct: 387 VLVENFSKRSRQ-QLCGRTQQNKMVVF 412
>gi|85818018|gb|EAQ39186.1| tRNA-i(6)A37 modification enzyme MiaB [Dokdonia donghaensis MED134]
Length = 484
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/455 (43%), Positives = 286/455 (62%), Gaps = 27/455 (5%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
++ + +++ E+YGCQMN D E+V SI+ N GY+ N+ E A+++ +NTC+IR+ AE
Sbjct: 19 KLENSKKLFIESYGCQMNFADSEVVASILANEGYNTTQNL-EEADLVLVNTCSIREKAEV 77
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGP 191
V +RL + +KR+ + G VLGCMAERLK K L+ +K+VD+V GP
Sbjct: 78 TVRKRLEKYQAVKRKQNPTMKVG-----------VLGCMAERLKSKFLEEEKIVDLVVGP 126
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
DAY+D+P LL EV+ G+ +N +LS EETY DISPVR+ N VTAFVS+ RGC+NMC+FC
Sbjct: 127 DAYKDIPNLLSEVEEGRDAVNVILSKEETYGDISPVRLQTNGVTAFVSITRGCDNMCTFC 186
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWR 310
+VPFTRGRERSR +SI++EV +L G KE+TLLGQNV+SY G++K+ + +
Sbjct: 187 VVPFTRGRERSRDPQSILEEVQDLANRGFKEITLLGQNVDSYLWYGGGLKKDFDKASEM- 245
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
K + FA L+D ++ P+MR R+++ +P+D +++ +M N+C
Sbjct: 246 ----------AKATAVNFAQLMDMVAKAQPKMRIRFSTSNPQDMTLDVIEVMASHKNICN 295
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
YIHLP Q+G+ +L+ M R +T Y L+ I+ +IPD+G+S D I GF ETEE+H
Sbjct: 296 YIHLPVQSGSDRILKLMNRQHTVAEYKTLIDNIKNLIPDIGISQDMITGFPTETEEDHQG 355
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRE-STGQCYD 489
TL L+ V YD +MF YS R T A R DD+P E+K+RRL ++I+ RE S
Sbjct: 356 TLDLIDYVKYDYGFMFYYSERPGTLAERKMEDDIPLEIKKRRLQDVIDLQREISRKNLLR 415
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q T++ VL+E +KK D E G++D+ F
Sbjct: 416 YQDQTIE-VLIEKESKKNKD-EWSGRNDQNVVAVF 448
>gi|376317115|emb|CCG00488.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [uncultured Flavobacteriia
bacterium]
Length = 445
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/438 (44%), Positives = 285/438 (65%), Gaps = 26/438 (5%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN D E+V SI+K GY E+ + +A ++ +NTC+IRD AE V +L F K+E
Sbjct: 1 MNFADSEVVASILKEDGY-ELTDKANDANLVLLNTCSIRDKAEQTVRNKLKNFNSQKKEN 59
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
K K+ +LGCMAERLK+K+LD +K+VD+V GPD+Y+DLP LL+EV++
Sbjct: 60 K------------DLKVGLLGCMAERLKEKLLDEEKIVDLVVGPDSYKDLPNLLDEVEHN 107
Query: 208 QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVES 267
Q+ +N +LS ETY DISPVR+ N + AFVS+ RGC+NMC+FC+VPFTRGRERSR +S
Sbjct: 108 QRAVNVILSKSETYGDISPVRLYNNGINAFVSITRGCDNMCTFCVVPFTRGRERSRNPDS 167
Query: 268 IVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGL- 326
I++E++EL ++G KE+TLLGQNV+SY G K + F + +K+
Sbjct: 168 ILREINELNEKGYKEITLLGQNVDSYLWYGGGPK-----------KDFKKASEYQKLNAK 216
Query: 327 RFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLER 386
RF+DLL+ ++ FPE+R R+++ +P+D +++ M N+C YIHLP Q+G+ +L++
Sbjct: 217 RFSDLLELVASNFPEIRIRFSTSNPQDMTADVIETMAKYKNICNYIHLPIQSGSDRILKK 276
Query: 387 MRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMF 446
M R +TRE YL L++KIR+IIP+ G+S D I GF E E +H DTL+LM+ V YD YMF
Sbjct: 277 MNRLHTREEYLKLIKKIREIIPNCGISHDMITGFPTENERDHHDTLSLMEEVKYDFGYMF 336
Query: 447 AYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKK 506
AYS R T+A R++ DD+ E+KQRRL E+I ++ + + + VL++ +KK
Sbjct: 337 AYSERPGTYAARHFKDDICPEIKQRRLEEIITLQQKHSFERNKRFINRKCSVLIDKSSKK 396
Query: 507 APDTELVGKSDRGHRVAF 524
+ D G++ + V F
Sbjct: 397 SDDY-WSGRTSENNVVVF 413
>gi|294675532|ref|YP_003576148.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella ruminicola 23]
gi|294471893|gb|ADE81282.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella ruminicola 23]
Length = 470
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/452 (45%), Positives = 276/452 (61%), Gaps = 45/452 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+M+ AGY E + A+ +F+NTC++RD AE K++ RL
Sbjct: 29 KLYIETYGCQMNVADSEVVASVMQMAGY-ETTETIDEADAVFLNTCSVRDNAEQKIYHRL 87
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+R K+ + PK++ VLGCMAER + +LD + D+V GPDAY
Sbjct: 88 EALDAERRRRLKS-------NPEAPKMILGVLGCMAERAQRDLLD-NHFADLVAGPDAYL 139
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRIS-KNSVTAFVSVMRGCNNMCSFCIVP 254
LP L+ + + G K +NT LS ETY D+ P RI + + FVS+MRGCNN C +CIVP
Sbjct: 140 SLPDLIAQAELGHKAMNTELSTSETYKDVVPQRIGIGHKIGGFVSIMRGCNNFCHYCIVP 199
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN--DTSGMEKEVEPGANWRLS 312
+TRGRERSR VESI++EV +L +G KEVTLLGQNVNSY DT
Sbjct: 200 YTRGRERSRDVESILREVRDLRDKGFKEVTLLGQNVNSYKFEDTD--------------- 244
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
F LL R++ E P MR R+T+ HPKD DE L ++ + PNVCK+I
Sbjct: 245 ---------------FPTLLRRVAEEVPTMRVRFTTSHPKDMSDETLKVIAEVPNVCKHI 289
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L+ M R YTRE Y+D V IR+IIPD GLS+D G+ ETEE+H +L
Sbjct: 290 HLPVQSGSDRILKLMNRKYTREWYMDRVHAIRRIIPDCGLSTDIFVGYHSETEEDHQLSL 349
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
LM+ VGYD A+MF YS R T+A ++ DDVPEE K RRL ELI E +
Sbjct: 350 DLMREVGYDSAFMFKYSERPGTYASKHLPDDVPEEEKIRRLNELIALQTEMSAIQNKKDE 409
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VLVEG +K++ + +L G++++ V F
Sbjct: 410 GKEFDVLVEGFSKRSRE-QLCGRTEQNKMVVF 440
>gi|409196682|ref|ZP_11225345.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Marinilabilia
salmonicolor JCM 21150]
Length = 462
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/452 (44%), Positives = 276/452 (61%), Gaps = 42/452 (9%)
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
H+ ++Y ETYGCQMN D E+V S+M+ GY E +A+ IFINTC+IR+ AE +V
Sbjct: 21 HNGKKLYIETYGCQMNFADSEVVASVMQMDGY-ETSGSHTDADAIFINTCSIRENAEQRV 79
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPD 192
R+ LK++ HP ++ ++GCMAER K+++ + D+V GPD
Sbjct: 80 LARVRELKALKKQ-------------HPKLVIGIIGCMAERAKEQLFEVG--ADLVAGPD 124
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
AY DLP L+ V+ G+K IN LS ETY DI P R+ N +AF+S+MRGCNN C++CI
Sbjct: 125 AYMDLPNLVSLVEQGEKAINVELSTTETYRDIIPKRLGPNKTSAFISIMRGCNNFCTYCI 184
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRGRERSR ESI +E D+L KEG KEV+LLGQNVNSY +G +KE++
Sbjct: 185 VPYTRGRERSRDPESIREEFDKLVKEGYKEVSLLGQNVNSYLHKNG-DKEMD-------- 235
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
F LLD L+ EFPE R R+T+ +PKD DE L +M N+CK+I
Sbjct: 236 ---------------FPVLLDFLATEFPETRIRFTTSNPKDMSDETLKVMAAHHNLCKHI 280
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G++ +L+ M R YT E Y + ++ I +I+P G+++D CGF ETEE+H TL
Sbjct: 281 HLPLQSGSTKILKLMNRKYTAEWYKNRIEAIHEILPGCGITTDVFCGFHSETEEDHQATL 340
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
LM+ G+DMA+MF YS R T+AH+ D+VPEEVK RL E+I + + +
Sbjct: 341 DLMQWAGFDMAFMFKYSERPGTYAHKKLPDNVPEEVKGTRLQEIIALQNRLSLESNQKDI 400
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VLVE +KK+ E G++ + V F
Sbjct: 401 GKTFEVLVESVSKKSTQ-EFFGRTSQNKVVVF 431
>gi|417779503|ref|ZP_12427288.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira weilii str.
2006001853]
gi|410780332|gb|EKR64926.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira weilii str.
2006001853]
Length = 449
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/451 (44%), Positives = 280/451 (62%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K PK+V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPKLVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRSGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G+++VTLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLAEKGIRQVTLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FADL+ L E R R+TSPHPKDFP LL +M P C IH
Sbjct: 214 --------KEQGRDFADLIRMLLDETTIERIRFTSPHPKDFPVRLLRLMAQNPRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVREIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A + D+VPEE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMAQKKLPDNVPEETKSARLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V +L+E ++K+ + +L G++ G F
Sbjct: 386 RVYSILIENTSRKS-EKQLCGRTPCGRMAVF 415
>gi|359727231|ref|ZP_09265927.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
weilii str. 2006001855]
Length = 449
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/451 (44%), Positives = 280/451 (62%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K PK+V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPKLVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRSGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G+++VTLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLAEKGIRQVTLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FADL+ L E R R+TSPHPKDFP LL +M P C IH
Sbjct: 214 --------KEQGRDFADLIRMLLDETTIERIRFTSPHPKDFPVRLLRLMAQNPRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVREIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A + D+VPEE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMAQKKLPDNVPEETKSARLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V +L+E ++K+ + +L G++ G F
Sbjct: 386 RVYSILIENTSRKS-EKQLCGRTPCGRMTVF 415
>gi|346224891|ref|ZP_08846033.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Anaerophaga
thermohalophila DSM 12881]
Length = 461
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/463 (43%), Positives = 276/463 (59%), Gaps = 44/463 (9%)
Query: 64 EVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTC 123
+ + A S ++ +IY ETYGCQMN D E+V S+M+ GY E + A+ IFINTC
Sbjct: 10 DTTEAVLSYGSTEKKIYIETYGCQMNFADSEVVASVMQMDGY-ETTSEYAQADAIFINTC 68
Query: 124 AIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDA 181
+IR+ AE +V R + ++ K P ++ ++GCMAER+KD++ +
Sbjct: 69 SIRENAEQRVLGR--------------IKELKALKKKKPGLILGIIGCMAERVKDRLFEE 114
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
D+V GPDAY DLP L+ + GQK IN LS ETY D+ P R+ ++AFVS+M
Sbjct: 115 G--ADIVAGPDAYLDLPNLVSMAEQGQKTINVELSRTETYRDVIPKRLGPGKISAFVSIM 172
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++C+VP+TRGRERSR SI KE+ L K G KE+TLLGQNVNS+
Sbjct: 173 RGCNNFCTYCVVPYTRGRERSRDPLSIKKEIAGLVKNGYKEITLLGQNVNSF-------- 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
+ K K + F +LLD L+ EFPE R R+T+ HPKD D+ L +
Sbjct: 225 ----------------LYKEKNSTMNFPELLDFLAHEFPETRIRFTTSHPKDMSDDTLRV 268
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
M N+CK+IHLP Q+G++ +L M R YT E Y V+ IR I+P G+++D CGF
Sbjct: 269 MARHQNLCKHIHLPLQSGSNRILNLMNRKYTAEWYKSRVEAIRNILPGCGITTDVFCGFH 328
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H TL LMK G+DMAYMF YS R T+A + D+VPEEVK RRLTE+IE
Sbjct: 329 SETEEDHRQTLELMKWAGFDMAYMFKYSERPGTYAQKKLPDNVPEEVKSRRLTEIIELQN 388
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + + + +G VL E +KK+ D E VG++ + V F
Sbjct: 389 QLSLRSNQNDIGKTFEVLTESISKKSKD-EFVGRTSQNKVVVF 430
>gi|288800434|ref|ZP_06405892.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
299 str. F0039]
gi|288332647|gb|EFC71127.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
299 str. F0039]
Length = 441
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/447 (43%), Positives = 284/447 (63%), Gaps = 37/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+M+ AGY N E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLFIETYGCQMNVADSEVVASVMQMAGYEMCDNEAE-ADAIFMNTCSVRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ +K + + VLGCMAER+KD +++ + D+V GPD+Y +L
Sbjct: 62 DTLHAEQKKGRKLI------------LGVLGCMAERVKDDLIN-NHHADLVAGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G K I+ LS ETY DI P RI+ + + FVS+MRGC+N C +CIVP+TR
Sbjct: 109 PDMIAQAETGSKAIDIELSKTETYKDIVPQRIALSKIGGFVSIMRGCDNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VES++ EV +L K+G +EVTLLGQNVNSY+ + + EV
Sbjct: 169 GRERSRDVESVLAEVRDLCKQGYREVTLLGQNVNSYSFENEVTGEVTS------------ 216
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
F DLL ++ E P MR R+++ HPKD D+ L ++ + PNVCK+IHLP Q
Sbjct: 217 ----------FPDLLRLVAREVPTMRIRFSTSHPKDMSDDTLRVIAEEPNVCKHIHLPVQ 266
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ VL+ M R YT YLD V+ I++IIPD G+S+D G+ GE EE+H +L LMK
Sbjct: 267 SGSDKVLKLMNRKYTVAWYLDRVKAIKEIIPDCGISTDIFVGYHGEEEEDHQMSLELMKT 326
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD ++MF YS R T+A ++ D++ EEVK RRL E+I+ + + G V
Sbjct: 327 VGYDSSFMFKYSERPGTYASKHLPDNISEEVKLRRLNEMIQLQTQLSAISNKKDEGKVFE 386
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+K++ + +L G++++ V F
Sbjct: 387 VLVEGPSKRSRE-QLCGRTEQNKMVVF 412
>gi|421132655|ref|ZP_15592820.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
str. 2008720114]
gi|410355860|gb|EKP03246.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
str. 2008720114]
Length = 449
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 279/449 (62%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRGGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L ++G+++VTLLGQNVNSY
Sbjct: 176 TRGRERSRDPKSIVREVQDLVQKGIRQVTLLGQNVNSY---------------------- 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K+ G FA L+ L E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 214 ------KEQGTDFAGLIRMLLDETSIERIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +LD+V++IR +PDVG+++D I GF ETEEE DTL ++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLDVVKEIRNTVPDVGITTDIIVGFPNETEEEFEDTLAVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ + +L G++ G F
Sbjct: 388 YSILIENISRKS-EKQLCGRTPCGRMTVF 415
>gi|421107681|ref|ZP_15568232.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
str. H2]
gi|410007268|gb|EKO60979.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
str. H2]
Length = 449
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/449 (44%), Positives = 283/449 (63%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRGGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L ++G+++VTLLGQNVNSY E++ + R+
Sbjct: 176 TRGRERSRDPKSIVREVQDLVQKGIRQVTLLGQNVNSYK-----EQDTDFAGLIRM---- 226
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
LLD S+E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 227 ---------------LLDETSIE----RIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +LD+V++IR +PDVG+++D I GF ETEEE DTLT++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLDVVKEIRNTVPDVGITTDIIVGFPNETEEEFEDTLTVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ + +L G++ G F
Sbjct: 388 YSILIENISRKS-EKQLCGRTPCGRMTVF 415
>gi|332292317|ref|YP_004430926.1| MiaB family RNA modification protein [Krokinobacter sp. 4H-3-7-5]
gi|332170403|gb|AEE19658.1| RNA modification enzyme, MiaB family [Krokinobacter sp. 4H-3-7-5]
Length = 483
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/449 (43%), Positives = 282/449 (62%), Gaps = 27/449 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN D E+V SI+ N GY+ + E A+++ +NTC+IR+ AE V +RL
Sbjct: 25 KLFIESYGCQMNFADSEVVASILANEGYN-TTQILEEADLVLVNTCSIREKAEVTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR+ N+ G VLGCMAERLK K L+ +K+VD+V GPDAY+D+
Sbjct: 84 EKYQAVKRKQNPNMKVG-----------VLGCMAERLKSKFLEEEKIVDLVVGPDAYKDI 132
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G+ +N +LS EETY DISPVR+ N VTAFVS+ RGC+NMC+FC+VPFTR
Sbjct: 133 PNLLSEVEEGRNAVNVILSKEETYGDISPVRLLTNGVTAFVSITRGCDNMCTFCVVPFTR 192
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFN 316
GRERSR +SI++EV +L ++G KE+TLLGQNV+SY G++K+ + +
Sbjct: 193 GRERSRDPQSILEEVQDLAEKGFKEITLLGQNVDSYLWYGGGLKKDFDKASEM------- 245
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K + FA L+D ++ P+MR R+++ +P+D +++ +M NVC YIHLP
Sbjct: 246 ----AKATAVNFAQLMDTVAKAQPKMRIRFSTSNPQDMTLDVIEVMAKHKNVCNYIHLPV 301
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +T Y L+ I+ +IP +G+S D I GF ETEE+H TL L+
Sbjct: 302 QSGSDRILQLMNRQHTVAEYKTLIDNIKNLIPHIGISQDMITGFPTETEEDHQGTLDLIN 361
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRE-STGQCYDSQVGTV 495
V YD +MF YS R T A R DD+P +K+RRL ++I+ R S Q TV
Sbjct: 362 YVKYDFGFMFYYSERPGTMAERKMEDDIPLAIKKRRLQDVIDLQRAISRDNLLRYQDQTV 421
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +L+E +KK D E G++D+ F
Sbjct: 422 E-ILIEKESKKNKD-EWSGRNDQNVVAVF 448
>gi|418728281|ref|ZP_13286856.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. UI 12758]
gi|410776945|gb|EKR56918.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. UI 12758]
Length = 449
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 279/449 (62%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+M++A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMRDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRKGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L ++G++++TLLGQNVNSY
Sbjct: 176 TRGRERSRDPKSIVREVQDLVQKGIRQITLLGQNVNSY---------------------- 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K+ FA L+ L E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 214 ------KEQDTDFAGLIQMLLDETSIERIRFTSPHPKDFPTHLLQLMSENPRFCSNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL ++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLDVVKEIRNIVPDVGITTDIIVGFPNETEEEFEDTLAVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ + +L G++ G F
Sbjct: 388 YSILIENISRKS-EKQLCGRTPCGRMTVF 415
>gi|323343556|ref|ZP_08083783.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oralis ATCC
33269]
gi|323095375|gb|EFZ37949.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oralis ATCC
33269]
Length = 434
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 282/447 (63%), Gaps = 43/447 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V + A+ +F+NTC++R+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCDTESEADAVFLNTCSVRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ ++ + + VLGCMAER+KD +++ + D+V GPD+Y +L
Sbjct: 62 DALHAERKKGRELI------------LGVLGCMAERVKDDLIE-NHHADLVAGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G K I+ LS ETY D+ P R+ + FVS+MRGC+N C +CIVP+TR
Sbjct: 109 PDMIAQAETGNKAIDIELSKTETYKDVVPQRVILGKIGGFVSIMRGCDNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +ESI++EV +L + KEVTLLGQNVNSY R +
Sbjct: 169 GRERSRDIESILREVIDLRDKHYKEVTLLGQNVNSY----------------RFGD---- 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ F LL R++ P+MR R+T+ HPKD DE L+++ D PNVCK+IHLP Q
Sbjct: 209 --------IGFPQLLRRVAEVVPDMRVRFTTSHPKDMSDETLHVIADMPNVCKHIHLPVQ 260
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL+ M R YTRE Y+D VQ IR+I+PD GLS+D G+ GETEE+H +L+LMK
Sbjct: 261 SGSNKVLKLMNRKYTREWYMDRVQAIRRIVPDCGLSTDIFVGYHGETEEDHRQSLSLMKE 320
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD A+MF YS R T+A ++ D+V EE K RRL ELI E + G
Sbjct: 321 VGYDSAFMFKYSERPGTYASKHLPDNVSEEEKVRRLNELIHLQTELSAVSNKRDEGKEFD 380
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ ++L G++++ V F
Sbjct: 381 VLVEGFSKRSR-SQLCGRTEQNKMVVF 406
>gi|421114972|ref|ZP_15575386.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410013693|gb|EKO71770.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
Length = 449
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 279/449 (62%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+M++A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMRDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRKGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L ++G++++TLLGQNVNSY
Sbjct: 176 TRGRERSREPKSIVREVQDLVQKGIRQITLLGQNVNSY---------------------- 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K+ FA L+ L E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 214 ------KEQDTDFAGLIQMLLDETSIERIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL ++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLDVVKEIRNIVPDVGITTDIIVGFPNETEEEFEDTLAVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ + +L G++ G F
Sbjct: 388 YSILIENISRKS-EKQLCGRTPCGRMTVF 415
>gi|24213805|ref|NP_711286.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
interrogans serovar Lai str. 56601]
gi|45658409|ref|YP_002495.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|386073368|ref|YP_005987685.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai
str. IPAV]
gi|417763426|ref|ZP_12411404.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. 2002000624]
gi|417764936|ref|ZP_12412903.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417769972|ref|ZP_12417886.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Pomona str. Pomona]
gi|417776836|ref|ZP_12424669.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. 2002000621]
gi|417785765|ref|ZP_12433467.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. C10069]
gi|418667061|ref|ZP_13228476.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418671161|ref|ZP_13232515.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. 2002000623]
gi|418681122|ref|ZP_13242356.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418692949|ref|ZP_13254019.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. FPW2026]
gi|418700282|ref|ZP_13261224.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418703252|ref|ZP_13264140.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418709794|ref|ZP_13270580.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418714226|ref|ZP_13274786.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. UI 08452]
gi|418727711|ref|ZP_13286299.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. UI 12621]
gi|421084635|ref|ZP_15545491.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira santarosai
str. HAI1594]
gi|421103382|ref|ZP_15563982.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421119134|ref|ZP_15579459.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. Brem 329]
gi|421127280|ref|ZP_15587504.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421134131|ref|ZP_15594273.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|81406958|sp|Q72PA4.1|MIAB_LEPIC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|81470597|sp|Q8F743.1|MIAB_LEPIN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|24194637|gb|AAN48304.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai
str. 56601]
gi|45601652|gb|AAS71132.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353457157|gb|AER01702.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai
str. IPAV]
gi|400327225|gb|EJO79480.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400353380|gb|EJP05556.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357284|gb|EJP13424.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. FPW2026]
gi|409940632|gb|EKN86271.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. 2002000624]
gi|409948225|gb|EKN98215.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Pomona str. Pomona]
gi|409951106|gb|EKO05623.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. C10069]
gi|409959069|gb|EKO22846.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. UI 12621]
gi|410021869|gb|EKO88652.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410348082|gb|EKO98920.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. Brem 329]
gi|410367128|gb|EKP22516.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432585|gb|EKP76940.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira santarosai
str. HAI1594]
gi|410435370|gb|EKP84502.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410573514|gb|EKQ36563.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. 2002000621]
gi|410581830|gb|EKQ49637.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. 2002000623]
gi|410757136|gb|EKR18751.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410760183|gb|EKR26379.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410767123|gb|EKR37802.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410770029|gb|EKR45256.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410789169|gb|EKR82871.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
str. UI 08452]
gi|455666195|gb|EMF31646.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455793121|gb|EMF44835.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456822880|gb|EMF71350.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Canicola str. LT1962]
Length = 449
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 279/449 (62%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+M++A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMRDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRKGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L ++G++++TLLGQNVNSY
Sbjct: 176 TRGRERSRDPKSIVREVQDLVQKGIRQITLLGQNVNSY---------------------- 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K+ FA L+ L E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 214 ------KEQDTDFAGLIQMLLDETSIERIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL ++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLDVVKEIRNIVPDVGITTDIIVGFPNETEEEFEDTLAVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ + +L G++ G F
Sbjct: 388 YSILIENISRKS-EKQLCGRTPCGRMTVF 415
>gi|418685220|ref|ZP_13246397.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418739328|ref|ZP_13295716.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|410740216|gb|EKQ84937.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410753580|gb|EKR10545.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 449
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 282/449 (62%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSASSD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRGGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L ++G+++VTLLGQNVNSY E++ + R+
Sbjct: 176 TRGRERSRDPKSIVREVQDLVQKGIRQVTLLGQNVNSYK-----EQDTDFAGLIRM---- 226
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
LLD S+E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 227 ---------------LLDETSIE----RIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +LD+V++IR +PDVG+++D I GF ETEEE DTL ++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLDVVKEIRNTVPDVGITTDIIVGFPNETEEEFEDTLAVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ + +L G++ G F
Sbjct: 388 YSILIENISRKS-EKQLCGRTPCGRMTVF 415
>gi|398338526|ref|ZP_10523229.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
kirschneri serovar Bim str. 1051]
gi|418696016|ref|ZP_13257026.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
str. H1]
gi|421088922|ref|ZP_15549739.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
str. 200802841]
gi|409956196|gb|EKO15127.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
str. H1]
gi|410002320|gb|EKO52840.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
str. 200802841]
Length = 449
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 282/449 (62%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRGGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L ++G+++VTLLGQNVNSY E++ + R+
Sbjct: 176 TRGRERSRDPKSIVREVQDLVQKGIRQVTLLGQNVNSYK-----EQDTDFAGLIRM---- 226
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
LLD S+E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 227 ---------------LLDETSIE----RIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +LD+V++IR +PDVG+++D I GF ETEEE DTL ++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLDVVKEIRNTVPDVGITTDIIVGFPNETEEEFEDTLAVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ + +L G++ G F
Sbjct: 388 YSILIENISRKS-EKQLCGRTPCGRMTVF 415
>gi|398336022|ref|ZP_10520727.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
kmetyi serovar Malaysia str. Bejo-Iso9]
Length = 449
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 281/449 (62%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PE++++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSSSPD-PEDSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRGGENSIALTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L +G+++VTLLGQNVNSY + E F
Sbjct: 176 TRGRERSRDPKSIVREVQDLADKGIRQVTLLGQNVNSYKEQG---------------EDF 220
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ K+ LLD S+E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 221 AGLIKM---------LLDETSIE----RIRFTSPHPKDFPTHLLRLMAENPRFCPNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +L++V++IR I+PDVG+++D I GF ETEEE DTL ++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLEVVKEIRSIVPDVGITTDIIVGFPNETEEEFEDTLAVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ + +L G++ G F
Sbjct: 388 YSILIENTSRKS-EKQLCGRTPCGRMTVF 415
>gi|418675772|ref|ZP_13237058.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|400323537|gb|EJO71385.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
Length = 449
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 281/449 (62%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRGGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L ++G+++VTLLGQNVNSY E++ + R+
Sbjct: 176 TRGRERSRDPKSIVREVQDLVQKGIRQVTLLGQNVNSYK-----EQDTDFAGLIRM---- 226
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
LLD S+E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 227 ---------------LLDETSIE----RIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +LD+V++IR +PDVG+++D I GF ETEEE DTL ++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLDVVKEIRNTVPDVGITTDIIVGFPNETEEEFEDTLAVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ +L G++ G F
Sbjct: 388 YSILIENISRKS-KKQLCGRTPCGRMTVF 415
>gi|418735050|ref|ZP_13291462.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410749306|gb|EKR02198.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 449
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 196/451 (43%), Positives = 279/451 (61%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K P++V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPELVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRSGEHSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G++++TLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLTEKGIRQITLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FA L+ L E R R+TSPHPKDFP LL +M P C IH
Sbjct: 214 --------KEQGTDFAGLIQMLLDETTIERIRFTSPHPKDFPVRLLRLMAQNPRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVREIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A + D+VPEE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMARKKLPDNVPEETKSARLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V +L+E ++K+ + +L G++ G F
Sbjct: 386 RVYSILIENTSRKS-EKQLCGRTPCGRMTVF 415
>gi|281421531|ref|ZP_06252530.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella copri DSM
18205]
gi|281404603|gb|EFB35283.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella copri DSM
18205]
Length = 444
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 187/447 (41%), Positives = 285/447 (63%), Gaps = 35/447 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+M+ AGY E+ E A+ IF+NTC+IR+ AE+K++ RL
Sbjct: 3 KLFIETYGCQMNVADSEVVASVMQMAGY-EICEKEEEADAIFLNTCSIRENAENKIYHRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ +K + + VLGCMAER+KD ++ + ++VCGPD+Y +L
Sbjct: 62 DTLHAEQKKGRKVI------------LGVLGCMAERVKDDLIQ-NHYANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G IN LS ETY DI P RI N V+ FVS+MRGCNN C +CIVP+TR
Sbjct: 109 PDMIAQCEMGTNAINIELSKTETYRDIVPQRIGGNRVSGFVSIMRGCNNFCHYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR ESI++EV +L + G KEVTLLGQNVNSY G +
Sbjct: 169 GRERSRDAESILREVRDLQQRGFKEVTLLGQNVNSY--------------------GLSP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K ++ L FA+LL ++ P+MR R+T+ +P+D +++L+ + + PN+CK+IH PAQ
Sbjct: 209 SGKREEGSLSFAELLHMVAQAVPDMRVRFTTSNPEDMTEDILHAIAEEPNLCKHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ +L+ M R YTRE YL + I++IIP G+++D G+ ETEE+H +TL+L+K
Sbjct: 269 SGSNKILKLMNRKYTREEYLQRIADIKRIIPGCGITTDIFVGYHDETEEDHQETLSLVKE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A ++ D+V EE K RL ELI+ E + + G V
Sbjct: 329 VGFDSAFMFKYSERPGTYAAKHLPDNVSEETKIARLNELIKLQTEVSAEQNKKDEGKVFT 388
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E +K++ + +++G++++ V
Sbjct: 389 ILIENFSKRSRE-QMMGRTEQNKAVVI 414
>gi|298372633|ref|ZP_06982623.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroidetes oral taxon
274 str. F0058]
gi|298275537|gb|EFI17088.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroidetes oral taxon
274 str. F0058]
Length = 440
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 274/445 (61%), Gaps = 43/445 (9%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMNV D E+V +IM + GY N E A+ I INTC++RD AE KV RL YF
Sbjct: 8 ETYGCQMNVADSEVVAAIMLSDGYQMTDNEKE-ADTIIINTCSVRDNAEQKVISRLQYFN 66
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLL 201
L R+ K++ G V+GCMAER+++++L+ +D V GPD+Y DLP L+
Sbjct: 67 SL-RKNNKDLNIG-----------VIGCMAERMQEELLEKHN-IDFVAGPDSYLDLPNLV 113
Query: 202 EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRER 261
V+ G+K IN LS ETY D+ P RI K S+ FVS+MRGCN CS+CIVP+TRGRER
Sbjct: 114 GAVEKGEKAINIKLSKTETYKDVMPARIGK-SILGFVSIMRGCNKFCSYCIVPYTRGRER 172
Query: 262 SRPVESIVKEVDELWKEGVKEVTLLGQNVNSY--NDTSGMEKEVEPGANWRLSEGFNSMC 319
SR VESI+ EV L G KEVTLLGQNV+SY ND G +
Sbjct: 173 SREVESIINEVKNLQANGYKEVTLLGQNVDSYLYNDGKGNATD----------------- 215
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
F+ LL++++L P+MR R+T+ +P D D+ L ++ PN+C+YIHLP Q+G
Sbjct: 216 --------FSQLLEKVALAVPDMRIRFTTSYPNDMTDQTLEVIAQYPNICRYIHLPVQSG 267
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ L+ M+R YTRE YLD + IR+I+P+ + +D CGF E+E++ DTL+LM+ V
Sbjct: 268 SNKTLKLMKRKYTREEYLDRIAAIRRILPEASIGTDIFCGFSDESEQDFEDTLSLMREVR 327
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+DMA+MF YS R T A ++ D++PEEVK RL ++I + + + +G VL
Sbjct: 328 FDMAFMFKYSERPGTFAAKHLPDNIPEEVKIHRLNQIIALQNQLSLTSNLNDIGKTFEVL 387
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +K++ D + G++ + V F
Sbjct: 388 VEGYSKRSRD-DFYGRTSQNKVVIF 411
>gi|325279819|ref|YP_004252361.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Odoribacter splanchnicus DSM 20712]
gi|324311628|gb|ADY32181.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Odoribacter splanchnicus DSM 20712]
Length = 443
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 198/451 (43%), Positives = 278/451 (61%), Gaps = 46/451 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y ETYGCQMNV D E+V +I+ AG+ + E A+VI +NTC++R+ AE +V R+
Sbjct: 4 KFYIETYGCQMNVADSEVVAAILTAAGFEHTTDKNE-ADVILVNTCSVRENAEQRVRGRV 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
F +++ ++P +V V+GCMAERL K+ + +K V++V GPDAY D
Sbjct: 63 QGFSEIRK-------------RNPHLLVGVMGCMAERLGAKLFEEEKNVNIVVGPDAYMD 109
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+E+ G+K IN LS ETY DI P RI + +++ FVS+MRGCNN C++CIVP+T
Sbjct: 110 LPLLIEQAAQGKKAINIELSTTETYKDICPSRIDETAISGFVSIMRGCNNFCTYCIVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR SIV EV +L + G KEVTLLGQNVNSY
Sbjct: 170 RGRERSRSPHSIVGEVIDLQRRGYKEVTLLGQNVNSY----------------------- 206
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ K ++ + F LL+ ++ P+MR R+ + HPKD D+ L + PN+CK IHLP
Sbjct: 207 -LYKDEQTRVDFPALLELVARTVPDMRIRFATSHPKDMSDKTLETIARWPNICKAIHLPV 265
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+++VL+ M R YTRE YLD + IR+I+PD G+S+D GF E+EE++ TL LM+
Sbjct: 266 QSGSNSVLKDMNRKYTREWYLDRIAAIRRIVPDCGISTDVFVGFHNESEEDYRQTLELMR 325
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ---VG 493
VG+D+AYMF YS R T A ++ D++ E K RRL ELI+ TG +S +G
Sbjct: 326 EVGFDLAYMFKYSERPGTQASKSLPDNIDETTKGRRLQELIDL---QTGWSLESNRRDIG 382
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +KK+ D E+ G+S + + F
Sbjct: 383 KTFEVLVEGVSKKSSD-EMFGRSSQNKVIVF 412
>gi|317504443|ref|ZP_07962422.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella salivae DSM
15606]
gi|315664431|gb|EFV04119.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella salivae DSM
15606]
Length = 444
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 184/400 (46%), Positives = 261/400 (65%), Gaps = 34/400 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 4 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEEEADAIFLNTCSVRENAENKIYNRL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ ++ + + VLGCMAER+KD ++ + +VCGPD+Y +L
Sbjct: 63 DTLHAEQKKGRQLI------------LGVLGCMAERVKDDLI-KNHHASLVCGPDSYLNL 109
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ E + G ++T LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVP+TR
Sbjct: 110 PTMIAECELGHAAVDTDLSTTETYRDVLPQRIGGNRVSGFVSIMRGCNNFCHYCIVPYTR 169
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L +G KEVTLLGQNVNSY G
Sbjct: 170 GRERSRDVESILAEVKDLHDKGFKEVTLLGQNVNSY--------------------GLLP 209
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P+MR R+T+ +P+D +++L+ + D PN+CK+IH PAQ
Sbjct: 210 NGKRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMSEDILHAIADEPNLCKHIHFPAQ 269
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ +L+ M R YTRE YLD V I++IIP GL++D G+ ETEE+ TL+L+K
Sbjct: 270 SGSNKILKLMNRKYTREDYLDKVAAIKRIIPGCGLTTDIFVGYHNETEEDQEQTLSLVKE 329
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
VGYD A+MF YS R T+A ++ D+VPEEVK RL +LI
Sbjct: 330 VGYDSAFMFKYSERPGTYAAKHLADNVPEEVKIARLNQLI 369
>gi|421099179|ref|ZP_15559838.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira borgpetersenii
str. 200901122]
gi|410797753|gb|EKR99853.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira borgpetersenii
str. 200901122]
Length = 449
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/451 (43%), Positives = 278/451 (61%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K P++V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPELVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P I N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRSGENSISLTRLSKIETYDEIEPRVI--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G+++VTLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLTEKGIRQVTLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FA L+ L E R R+TSPHPKDFP LL +M C IH
Sbjct: 214 --------KEQGRDFAGLIQMLLDETTIERIRFTSPHPKDFPVHLLRLMAQNSRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVREIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A + D+VPEE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMAQKKLPDNVPEETKSARLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V +L+E ++K+ + +L G++ G F
Sbjct: 386 RVYSILIENTSRKS-EKQLCGRTPCGRMTVF 415
>gi|456864769|gb|EMF83156.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira weilii serovar
Topaz str. LT2116]
Length = 449
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/451 (43%), Positives = 278/451 (61%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K PK+V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPKLVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRSGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G+++VTLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLAEKGIRQVTLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FA L+ L E R R+TSPHPKDFP LL +M C IH
Sbjct: 214 --------KEQGTDFAGLIQMLLDETTIERIRFTSPHPKDFPVRLLRLMAQNSRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETE+E DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVREIRNIVPDVGITTDIIVGFPNETEDEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A + D+VPEE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMARKKLPDNVPEETKSARLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V +L+E ++K+ + +L G++ G F
Sbjct: 386 RVYSILIENTSRKS-EKQLCGRTPCGRMAVF 415
>gi|212550847|ref|YP_002309164.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|229890446|sp|B6YRD1.1|MIAB_AZOPC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|212549085|dbj|BAG83753.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 449
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/447 (43%), Positives = 278/447 (62%), Gaps = 40/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
RI+ ETYGCQMN+ D EIV++I++ G+ N+ E A+V+ INTC++R+ AE K++ RL
Sbjct: 14 RIFIETYGCQMNIADSEIVIAIVQMDGFEYTENILE-ADVVLINTCSVRENAEKKIFSRL 72
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
YF LK++ + + I VLGCMA+R+++ ++ VD+V GPD+Y DL
Sbjct: 73 QYFQSLKKKRNQLI------------IGVLGCMAKRIRETLIQ-QYHVDLVVGPDSYMDL 119
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ V+ G K IN LS E Y I P+++S+ ++ F+S++RGCNN CS+CIVP+TR
Sbjct: 120 PHLIGTVEKGAKAININLSSTEVYKGIVPLKLSRIKISGFISIIRGCNNFCSYCIVPYTR 179
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI+ E+ L ++G KEV LLGQNVNSY + +E
Sbjct: 180 GRERSRDPKSILNELHILKEQGYKEVILLGQNVNSY---------------FYKNENITD 224
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
F LL+ ++L PEMR R+T+ HPKD DE L ++ N+CK+IHLP Q
Sbjct: 225 ----------FPHLLELVALNAPEMRIRFTTSHPKDMGDETLRVIAKYNNICKHIHLPIQ 274
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L M R YTRE YL V IR+I+P+V +S+D CGF ETEE+H TL+LMK
Sbjct: 275 SGSSKILRAMNRKYTREWYLQRVTSIRKIVPEVSISTDLFCGFPSETEEDHKKTLSLMKE 334
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A R D+VPEEVK RRL E+I + + +G
Sbjct: 335 VGFDSAFMFKYSERPETYASRYLPDNVPEEVKIRRLNEIITLQLKISLMKNKENIGKTME 394
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+EG +K++ + +L G++ + V F
Sbjct: 395 ILIEGFSKRSRE-QLFGRTLQNKIVLF 420
>gi|116327643|ref|YP_797363.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
borgpetersenii serovar Hardjo-bovis str. L550]
gi|116330557|ref|YP_800275.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
borgpetersenii serovar Hardjo-bovis str. JB197]
gi|122281687|sp|Q04UA3.1|MIAB_LEPBJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|122284560|sp|Q053R5.1|MIAB_LEPBL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|116120387|gb|ABJ78430.1| 2-methylthioadenine synthetase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124246|gb|ABJ75517.1| 2-methylthioadenine synthetase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 449
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/451 (43%), Positives = 278/451 (61%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K P++V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPELVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRSGEHSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G+++VTLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLTEKGIRQVTLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FA L+ L E R R+TSPHPKDFP LL +M P C IH
Sbjct: 214 --------KEQGTDFAGLIQMLLDETTIERIRFTSPHPKDFPVRLLRLMAQNPRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVREIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A + D+V EE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMARKKLPDNVSEETKSARLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V +L+E ++K+ + +L G++ G F
Sbjct: 386 RVYSILIENTSRKS-EKQLCGRTPCGRMTVF 415
>gi|449017031|dbj|BAM80433.1| probable 2-methylthioadenine synthetase [Cyanidioschyzon merolae
strain 10D]
Length = 605
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 220/460 (47%), Positives = 290/460 (63%), Gaps = 53/460 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMK-NAGYSEVIN----VPENAEVIFINTCAIRDYAEHK 132
+++ ETYGC MN +D EIV SI+ + +++N P+ A+V+ IN+CAIRD E +
Sbjct: 115 KVFIETYGCAMNTSDSEIVASILAARPDWFQLLNGPSASPDEADVVLINSCAIRDKPEVR 174
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILD---ADKMVDVV 188
V QRL+ +R GR Q + P +I+ +LGCMAERLK ++LD + ++VD+V
Sbjct: 175 VLQRLSMLRAAER--------GRGQ-RAPRRILGLLGCMAERLKTRLLDEMPSKRLVDLV 225
Query: 189 CGPDAYRDLPRLLEEV----DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGC 244
GPD+YRDLP LL+ + D + + LSLEETYADI+P+R +TA+VS+MRGC
Sbjct: 226 VGPDSYRDLPLLLQGLVRTTDLQRFAYHVQLSLEETYADIAPLR-DHGLITAYVSIMRGC 284
Query: 245 NNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVE 304
NN C+FC+VP TRG ERSR SI E++ L EG KEV LLGQNVNSY S
Sbjct: 285 NNHCAFCVVPQTRGPERSREPASIWNEIESLGNEGFKEVVLLGQNVNSYCYQSD------ 338
Query: 305 PGANWRLSEGFNSMCKVKKMGLRFADLLDRLS--LEFPEMRFRYTSPHPKDFPDELLYI- 361
+ KV K FADLL+ + E MR RYTSPHPKDFP E+L +
Sbjct: 339 -----------HPYPKVTK----FADLLEGVCEIAERHSMRVRYTSPHPKDFPHEVLRLY 383
Query: 362 MRDRP-NVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICG 419
R P +C+ IH+P Q+G+S VL RMRRGYTRE YL LV +IR + DV LS+D I G
Sbjct: 384 TRYAPGTLCRQIHVPMQSGSSEVLRRMRRGYTREEYLALVARIRDTVGADVALSTDIISG 443
Query: 420 FCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEA 479
FCGETE EHA+T++LM+ V +D A+MFAYS RERT A R Y DD+P+EVK RRL E+I
Sbjct: 444 FCGETEAEHAETISLMEQVRFDQAFMFAYSERERTIAARLYADDIPKEVKLRRLGEIIST 503
Query: 480 FRESTGQCYDSQVGTVQLVLVE----GPNKKAPDTELVGK 515
+ + + + VGT Q VLVE ++ D+E+ GK
Sbjct: 504 QLKISAERARAMVGTEQRVLVEEVVHANERQRLDSEISGK 543
>gi|359690307|ref|ZP_09260308.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418758567|ref|ZP_13314749.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|384114469|gb|EIE00732.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira licerasiae
serovar Varillal str. VAR 010]
Length = 449
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 199/451 (44%), Positives = 285/451 (63%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+M+ A + E ++ PE ++VIF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMQGAQF-ETVSDPELSDVIFLNTCAIRENAHAKIYGR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L +LK+ ++P ++ VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKK-------------RNPDLVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNYR 116
Query: 196 DLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L++ + ++ ++ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP
Sbjct: 117 TLPELIQTIRSDKQPVSLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVP 174
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRGRERSR SIV+E +L +GVK++TLLGQNVNSY SEG
Sbjct: 175 YTRGRERSRDPHSIVRETRDLVAQGVKQLTLLGQNVNSYK-----------------SEG 217
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
F+ FA L+ RL LE ++ R R+TSPHPKDFP LL +M + P C IH
Sbjct: 218 FD-----------FAGLV-RLLLEETDIERIRFTSPHPKDFPMHLLELMAENPRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+GN+ VLE M+R Y++E +L++V +I+ I+P+VGL++D I GF GET+E+ DTL
Sbjct: 266 LPLQSGNTDVLENMKRTYSKEEFLEVVDQIKTIVPNVGLTTDIIVGFPGETDEQFEDTLD 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ VG+DMA+MF YS RE T A + Y DDVPEEVK RLT+L++ + + +++G
Sbjct: 326 MVRKVGFDMAFMFKYSEREGTIAQKRYPDDVPEEVKGERLTKLVDLQTSISAEQNKARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+LVEG +KK+ E G++ G F
Sbjct: 386 KTFPILVEGASKKS-SKEACGRTPCGRMTVF 415
>gi|288925880|ref|ZP_06419810.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccae D17]
gi|402307623|ref|ZP_10826645.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella sp. MSX73]
gi|288337304|gb|EFC75660.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccae D17]
gi|400378335|gb|EJP31193.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella sp. MSX73]
Length = 444
Score = 364 bits (934), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 192/447 (42%), Positives = 279/447 (62%), Gaps = 35/447 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+MK AGY E+ E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 4 KLFIETYGCQMNVADSEVVASVMKMAGY-ELCEKEEEADAIFLNTCSVRENAENKIYHRL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ ++ + + VLGCMAER+KD ++D + +VCGPD+Y +L
Sbjct: 63 DTLHAERKKGRELI------------LGVLGCMAERVKDDLID-NHHASLVCGPDSYLNL 109
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G K I+ LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 110 PDMVAQCEMGNKAIDIELSKTETYRDVIPQRIGGNHVSGFVSIMRGCNNFCHYCIVPFTR 169
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+KEV +L G KEVTLLGQNVNSY G
Sbjct: 170 GRERSRDVESILKEVCDLRDRGFKEVTLLGQNVNSY--------------------GLLP 209
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K G FA LL +++ PEMR R+T+ +P+D D+++ + D PN+C +IH PAQ
Sbjct: 210 NGKRPADGTSFAQLLRKVAETVPEMRVRFTTSNPEDMTDDIVQAVADMPNLCNHIHFPAQ 269
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ VL M R YTR+ YLD V I+++IPD G+++D G+ E+EE++ TL+L++
Sbjct: 270 SGSDKVLRLMNRKYTRQQYLDKVATIKRLIPDCGITTDIFVGYHDESEEDYQQTLSLVRE 329
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD A+MF YS R T+A + D+VPEE K RRL ELI+ E + G +
Sbjct: 330 VGYDSAFMFKYSERPGTYAAEHLPDNVPEEEKVRRLNELIKLQTEISALQNKKDEGKEFV 389
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E +K++ +L+G++++ V
Sbjct: 390 ILIENFSKRSRQ-QLMGRTEQNKAVVI 415
>gi|345881401|ref|ZP_08832921.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Prevotella
oulorum F0390]
gi|343919640|gb|EGV30384.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Prevotella
oulorum F0390]
Length = 446
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 191/445 (42%), Positives = 279/445 (62%), Gaps = 35/445 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY ++ A+ IF+NTC++R+ AE+K++ RL
Sbjct: 4 KLYIETYGCQMNVADSEVVASVMKMAGY-DLCEDENEADAIFLNTCSVRENAENKIFHRL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ +K + + VLGCMAER+KD ++ + +VCGPDAY +L
Sbjct: 63 DTLHAEQKKGRKLI------------LGVLGCMAERVKDDLIQ-NHHCSLVCGPDAYLNL 109
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ E + G ++T LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVP+TR
Sbjct: 110 PEMIAECELGHTVMDTELSTTETYRDVLPQRIGGNKVSGFVSIMRGCNNFCHYCIVPYTR 169
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L ++G KEVTLLGQNVNSY G
Sbjct: 170 GRERSRDVESILNEVKDLAQKGFKEVTLLGQNVNSY--------------------GLLP 209
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K K G FA+LL +++ P MR R+T+ +P+D +++L+ + + PN+CK+IH PAQ
Sbjct: 210 NGKRPKEGTSFAELLRKVAQSVPHMRVRFTTSNPEDMTEDILHAVAEEPNLCKHIHFPAQ 269
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S VL+ M R YTRE YLD V I++IIPD GL++D G+ ETE++ TL LM+
Sbjct: 270 SGSSKVLKLMNRKYTREEYLDKVAAIKRIIPDCGLTTDIFVGYHNETEDDQQLTLDLMRT 329
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D A+MF YS R T+A ++ D+VPEE+K RL +LI+ E + G +
Sbjct: 330 VAFDSAFMFKYSERPGTYAAQHLPDNVPEEIKIARLNQLIQLQNEISAAQNKKDEGKEFI 389
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
+L E K+ + +L+G++++ V
Sbjct: 390 ILTERFGKRDRN-QLMGRTEQNKAV 413
>gi|371778147|ref|ZP_09484469.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Anaerophaga
sp. HS1]
Length = 464
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/450 (43%), Positives = 276/450 (61%), Gaps = 42/450 (9%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+ ++Y ETYGCQMNV D E+V SIM+ GY+ V A IFINTC+IR+ AE +V
Sbjct: 22 EKQLYIETYGCQMNVADSEVVASIMQMDGYTTTSEV-SGANAIFINTCSIRENAEQRVLG 80
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAY 194
R+ F LK+ K+P I+ V+GCMAER K+++LD VD+V GPDAY
Sbjct: 81 RIREFKALKK-------------KNPSLILGVIGCMAERAKEELLDEG--VDLVAGPDAY 125
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
DLP L+ + G+K IN LS +TY DI P R+ N+++AFVS+MRGCNN CS+C+VP
Sbjct: 126 LDLPNLVSMAEQGEKAINVELSETQTYRDIIPKRLGPNNISAFVSIMRGCNNFCSYCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRGRERSR SI E+++L K+G KE+TLLGQNVNSY
Sbjct: 186 YTRGRERSRDPFSIKHEIEDLVKKGYKEITLLGQNVNSYR-------------------- 225
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F++ + + F +LLD L FP R R+T+ HPKD E L ++ N+CK+IHL
Sbjct: 226 FDN----QNTKMNFPELLDFLGNTFPHTRIRFTTSHPKDMSLETLKVIARHQNLCKHIHL 281
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YT + Y + + IR+IIP+ +S+D + GF ETEE+H TL +
Sbjct: 282 PIQSGSTRMLKLMNRKYTAQEYREKIMAIREIIPECAISTDILSGFHSETEEDHQQTLEM 341
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
M+ +DMAYMF YS R T+A + D+VP EVK +RL E+I+ + + Q + +G
Sbjct: 342 MRWAKFDMAYMFKYSERPGTYAQKKLPDNVPPEVKGQRLNEIIQLQNQLSLQSNKNDIGK 401
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK+ + E VG++ + V F
Sbjct: 402 TFEVLIENISKKSKN-EFVGRTSQNKVVVF 430
>gi|374384516|ref|ZP_09642036.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Odoribacter laneus YIT
12061]
gi|373228424|gb|EHP50733.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Odoribacter laneus YIT
12061]
Length = 440
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 197/448 (43%), Positives = 270/448 (60%), Gaps = 40/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y ETYGCQMNV D E+V +I+ GY + + E A++I +NTC++R+ AE +V R+
Sbjct: 4 KFYIETYGCQMNVADSEVVAAILTAKGYEHIKDRNE-ADIILVNTCSVRENAEQRVRGRV 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F + R Q+ H I V+GCMAERL +K+ + +K V+++ GPDAY DL
Sbjct: 63 QGF-----------SEVRKQNPHLL-IGVMGCMAERLGEKLFEQEKNVNIIVGPDAYMDL 110
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+E+ G+K IN LS ETY DI P RI + S++ FVS+MRGCNN C++CIVP+TR
Sbjct: 111 PLLIEKASRGEKAINIQLSETETYKDICPSRIDETSISGFVSIMRGCNNFCTYCIVPYTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SIV EV +L K G KEVTLLGQNVNSY
Sbjct: 171 GRERSRSPHSIVSEVMDLQKRGYKEVTLLGQNVNSY------------------------ 206
Query: 318 MC-KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
C K + + F LL ++ P MR R+ + HPKD D+ L + N+CK IHLP
Sbjct: 207 -CYKDESTTVDFPALLALVARTVPSMRIRFATSHPKDMSDQTLETIARHSNICKAIHLPV 265
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+++VL+ M R YTRE YLD + IR+I+PD G+S+D GF E E + +TL+LM+
Sbjct: 266 QSGSNSVLKNMNRKYTREWYLDRIAAIRRIVPDCGISTDVFVGFHNENETDFRETLSLME 325
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D+AYMF YS R T A + D++ EE K RRL ELI+ + + +G
Sbjct: 326 EVKFDLAYMFKYSERPGTVASKRLPDNIDEETKGRRLQELIDLQIGWSLESNRKDIGKTF 385
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +KK+PD E+ G+S + + F
Sbjct: 386 EVLVEGVSKKSPD-EMFGRSSQNKVIVF 412
>gi|299142064|ref|ZP_07035198.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oris C735]
gi|298576526|gb|EFI48398.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oris C735]
Length = 444
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 191/445 (42%), Positives = 280/445 (62%), Gaps = 35/445 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V E A+ IF+NTC+IR+ AE+K++ RL
Sbjct: 4 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEEEADAIFLNTCSIRENAENKIYNRL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ ++ + + VLGCMAER+KD ++ + +VCGPD+Y +L
Sbjct: 63 DTLHAEQKKGRQLI------------LGVLGCMAERVKDDLI-KNHHASLVCGPDSYLNL 109
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ E + G ++T LS ETY ++ P RI N V+ FVS+MRGCNN C +CIVP+TR
Sbjct: 110 PTMIAECELGHATVDTNLSTTETYRNVLPQRIGGNRVSGFVSIMRGCNNFCHYCIVPYTR 169
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L +G KEVTLLGQNVNSY G
Sbjct: 170 GRERSRDVESILAEVKDLHDKGFKEVTLLGQNVNSY--------------------GLLP 209
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P+MR R+T+ +P+D +++L+ + + PN+CK+IH PAQ
Sbjct: 210 NGKRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDILHAIAEEPNLCKHIHFPAQ 269
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L+ M R YTRE YLD V I++IIP GL++D G+ ETEE+ TL+L+K
Sbjct: 270 SGSDKILKLMNRKYTREEYLDKVAAIKRIIPGCGLTTDIFVGYHDETEEDQQLTLSLVKE 329
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A ++ D+V EEVK RL ELI +G+ G+ +
Sbjct: 330 VGFDSAFMFKYSERPGTYAAKHLPDNVSEEVKIARLNELIHLQTAISGEQNKKDEGSEFV 389
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
+L E +KK + L+G++++ V
Sbjct: 390 ILTERFSKKDRN-HLMGRTEQNKAV 413
>gi|282858916|ref|ZP_06268056.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella bivia
JCVIHMP010]
gi|424899994|ref|ZP_18323536.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Prevotella bivia DSM 20514]
gi|282588298|gb|EFB93463.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella bivia
JCVIHMP010]
gi|388592194|gb|EIM32433.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Prevotella bivia DSM 20514]
Length = 442
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 192/447 (42%), Positives = 276/447 (61%), Gaps = 35/447 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V E A+ IF+NTC+IR+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCEKEEEADAIFLNTCSIRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
KR+ + + + VLGCMAER++D +++ + ++VCGPD+Y +L
Sbjct: 62 ETLHAEKRKGRDLI------------LGVLGCMAERVRDDLIE-NHYANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G + LS ETY +I P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PDMIAQCENGNNACDIELSTTETYRNIIPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI++EV +L G +EVTLLGQNVNSY G
Sbjct: 169 GRERSRDVESILQEVQDLKGRGFREVTLLGQNVNSY--------------------GLLP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P MR R+T+ +P+D +++L + D PN+C +IH PAQ
Sbjct: 209 NGKRPENGTSFAELLRKVAQSVPNMRVRFTTSNPEDMTEDILQAIADEPNLCHHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+++VL+ M R YTRE YLD V IR+IIPD GL++D G+ E+ E+H TL LM+
Sbjct: 269 SGSNSVLKDMNRKYTREEYLDKVAAIRRIIPDCGLTTDIFVGYHNESLEDHQQTLDLMRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A ++ D+V EE K RRL ELI + + + G
Sbjct: 329 VGFDSAFMFKYSERPGTYAAKHLPDNVSEEEKVRRLNELIHLQTQISAEMNKKDEGKEFD 388
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E K++ D +L+G++ + V
Sbjct: 389 ILIERFGKRSHD-QLMGRTPQNKAVVI 414
>gi|315606981|ref|ZP_07881987.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccae ATCC
33574]
gi|315251362|gb|EFU31345.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella buccae ATCC
33574]
Length = 444
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 191/447 (42%), Positives = 278/447 (62%), Gaps = 35/447 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+MK AGY E+ E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 4 KLFIETYGCQMNVADSEVVASVMKMAGY-ELCEKEEEADAIFLNTCSVRENAENKIYHRL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ ++ + + VLGCMAER+KD ++D + +VCGPD+Y +L
Sbjct: 63 DTLHAERKKGRELI------------LGVLGCMAERVKDDLID-NHHASLVCGPDSYLNL 109
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G K I+ LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 110 PDMVAQCEMGNKAIDIELSKTETYRDVIPQRIGGNHVSGFVSIMRGCNNFCHYCIVPFTR 169
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+KEV +L G KEVTLLGQNVNSY G
Sbjct: 170 GRERSRDVESILKEVCDLRDRGFKEVTLLGQNVNSY--------------------GLLP 209
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K G FA LL +++ EMR R+T+ +P+D D+++ + D PN+C +IH PAQ
Sbjct: 210 NGKRPADGTSFAQLLRKVAETVSEMRVRFTTSNPEDMTDDIVQAVADMPNLCNHIHFPAQ 269
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ VL M R YTR+ YLD V I+++IPD G+++D G+ E+EE++ TL+L++
Sbjct: 270 SGSDKVLRLMNRKYTRQQYLDKVATIKRLIPDCGITTDIFVGYHDESEEDYQQTLSLVRE 329
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD A+MF YS R T+A + D+VPEE K RRL ELI+ E + G +
Sbjct: 330 VGYDSAFMFKYSERPGTYAAEHLPDNVPEEEKVRRLNELIKLQTEISALQNKKDEGKEFV 389
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E +K++ +L+G++++ V
Sbjct: 390 ILIENFSKRSRQ-QLMGRTEQNKAVVI 415
>gi|281424718|ref|ZP_06255631.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oris F0302]
gi|281401088|gb|EFB31919.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella oris F0302]
Length = 444
Score = 360 bits (925), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 280/445 (62%), Gaps = 35/445 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V E A+ IF+NTC+IR+ AE+K++ RL
Sbjct: 4 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEEEADAIFLNTCSIRENAENKIYNRL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ L E KK GR + VLGCMAER+KD ++ + +VCGPD+Y +L
Sbjct: 63 DT---LHAEQKK----GRQLI-----LGVLGCMAERVKDDLI-KNHHASLVCGPDSYLNL 109
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ E + G ++T LS ETY ++ P RI N V+ FVS+MRGCNN C +CIVP+TR
Sbjct: 110 PTMIAECELGHATVDTNLSTTETYRNVLPQRIGGNRVSGFVSIMRGCNNFCHYCIVPYTR 169
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L +G KEVTLLGQNVNSY G
Sbjct: 170 GRERSRDVESILAEVKDLHDKGFKEVTLLGQNVNSY--------------------GLLP 209
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P+MR R+T+ +P+D +++L+ + + PN+CK+IH PAQ
Sbjct: 210 NGKRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDILHAIAEEPNLCKHIHFPAQ 269
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ +L+ M R YTRE YLD V I++IIP GL++D G+ ETEE+ TL+L+K
Sbjct: 270 SGSNKILKLMNRKYTREEYLDKVAAIKRIIPGCGLTTDIFVGYHDETEEDQQLTLSLVKE 329
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A + D+V EEVK RL ELI +G+ G+ +
Sbjct: 330 VGFDSAFMFKYSERPGTYAAKYLPDNVSEEVKIARLNELIHLQTTISGEQNKKDEGSEFV 389
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
+L E +KK + L+G++++ V
Sbjct: 390 ILTERFSKKDRN-HLMGRTEQNKAV 413
>gi|340347153|ref|ZP_08670266.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella dentalis DSM
3688]
gi|433652359|ref|YP_007278738.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Prevotella dentalis DSM 3688]
gi|339610236|gb|EGQ15096.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella dentalis DSM
3688]
gi|433302892|gb|AGB28708.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Prevotella dentalis DSM 3688]
Length = 467
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 190/424 (44%), Positives = 265/424 (62%), Gaps = 26/424 (6%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV D E+V S+M+ AGY E+ + + A+ IF+NTC+IR+ AE+K++ RL
Sbjct: 4 KLFIETYGCQMNVADSEVVASVMQMAGY-ELTDNEDEADAIFLNTCSIRENAENKIYHRL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ L R K + +S P + VLGCMAER+KD ++ + ++VCGPD+Y +L
Sbjct: 63 DTLHAL-RNSKFRIQNSKSAG---PILGVLGCMAERVKDDLV-KNHHANLVCGPDSYLNL 117
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + G ++ LS ETY D+ P RI N ++ FVS+MRGCNN C +CIVPFTR
Sbjct: 118 PEMMAAAENGLPAVDVTLSTTETYRDVIPQRIGGNRISGFVSIMRGCNNFCHYCIVPFTR 177
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+KEV +L +G KEVTLLGQNVNSY G
Sbjct: 178 GRERSRDVESILKEVRDLHDKGFKEVTLLGQNVNSY--------------------GLLP 217
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K G FA LL ++ P+MR R+T+ +P+D +++L+ + PN+C +IH PAQ
Sbjct: 218 NGKRPADGTLFAQLLRLVARAVPDMRVRFTTSNPEDMTEDILHAVAGEPNLCNHIHFPAQ 277
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M R YTRE YL V IR+IIPD G+++D G+ ETEE+ TL+L++
Sbjct: 278 SGSSKILKLMNRKYTREEYLGKVAAIRRIIPDCGITTDIFVGYHDETEEDQQQTLSLVRE 337
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A + D+VPEEVK RL ELI E + G V
Sbjct: 338 VGFDSAFMFKYSERPGTYAASHLPDNVPEEVKTDRLNELIRLQTEVSAAQNRKDEGKVFE 397
Query: 498 VLVE 501
VL+E
Sbjct: 398 VLIE 401
>gi|300175767|emb|CBK21310.2| unnamed protein product [Blastocystis hominis]
Length = 500
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/451 (42%), Positives = 281/451 (62%), Gaps = 32/451 (7%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN D EI+ +++ G +E N E A+VI +NTC++R++AE ++W RL F L +++
Sbjct: 1 MNRADSEIMETLLSECGMTESKN-EEEADVIIMNTCSVREHAESRIWNRLKQFRNLDKKY 59
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
KK + + GCMA RL+ K+L++ VDVV GPD+Y LP L+ + G
Sbjct: 60 KKRTI-----------LCISGCMATRLRTKLLESG--VDVVVGPDSYVHLPPLIFDAFNG 106
Query: 208 QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVES 267
++ +T L+ Y ISP + T +++MRGCNNMCS+C+VP+TRGRERS V+
Sbjct: 107 KQAFHTELNGNNDYDAISPSFLEPLPATQ-ITIMRGCNNMCSYCVVPYTRGRERSVDVDV 165
Query: 268 IVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVK-KMGL 326
+++EV + G KE+ LLGQNVNSY D S + K E + + GF S K K G+
Sbjct: 166 VLREVKRAEEHGYKEIMLLGQNVNSYCDRSHLAKGSE---KYETTPGFRSPTSTKAKTGI 222
Query: 327 RFADLLDRLSLEFPEMRFRYTSPHPK-----------DFPDELLYIMRDRPNVCKYIHLP 375
F +LL ++ E PE R R+ SPHPK DFP +L ++ + PN+C+ +HLP
Sbjct: 223 LFPELLRLVAEEVPETRIRFMSPHPKVEIGGRKIYLKDFPMSVLEVIAEHPNICRSLHLP 282
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+++ L+RM R YTREA++ LV IR I+PD +S+D I GFCGETE EHADT+ LM
Sbjct: 283 LQSGSNSCLQRMNRPYTREAFIQLVDAIRSILPDCAISTDVIAGFCGETEAEHADTVELM 342
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ +G+D A+M+ YSMRE T+A R + DD+P EVK+RRL E+ +AF + + SQ G V
Sbjct: 343 REIGFDHAFMYLYSMRENTYAWRYFKDDIPLEVKKRRLVEIQDAFYSTLREKLPSQKGKV 402
Query: 496 QLVLVEGPNKKAP--DTELVGKSDRGHRVAF 524
+LVLVEG +K++ + ++ G+ D F
Sbjct: 403 ELVLVEGESKRSKPGEMQMKGRCDGNRMCVF 433
>gi|345884806|ref|ZP_08836206.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Prevotella
sp. C561]
gi|345042305|gb|EGW46406.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Prevotella
sp. C561]
Length = 442
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 193/447 (43%), Positives = 281/447 (62%), Gaps = 35/447 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCEKEEEADAIFLNTCSVRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
L E KK GR + VLGCMAER+++ ++ + ++VCGPD+Y +L
Sbjct: 62 EA---LHAEQKK----GRDLI-----LGVLGCMAERVRNDLIQ-NHHANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G ++ LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PDMIAQCENGTNAMDIELSTTETYRDVIPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+KEV +L +G KEVTLLGQNVNSY G
Sbjct: 169 GRERSRDVESILKEVKDLHDKGFKEVTLLGQNVNSY--------------------GLLP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G+ FA+LL +++ P+MR R+T+ +P+D ++++ + PN+C +IH PAQ
Sbjct: 209 NGKRPENGVSFAELLHKVAQSVPDMRVRFTTSNPEDMTEDIIEAVATEPNLCNHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+++VL+ M R YTRE YL+ V IR++IPD GL++D G+ E+EE+ TL+LM+
Sbjct: 269 SGSNSVLKVMNRKYTREDYLEKVAAIRRLIPDCGLTTDIFIGYHNESEEDFQQTLSLMRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A ++ D+VPEE K RRL ELI E + + G
Sbjct: 329 VGFDSAFMFKYSERPGTYAAKHLPDNVPEEEKIRRLNELIRLQTEISAEQNKKDEGKEFD 388
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E K++ + +L+G++ + V
Sbjct: 389 ILIERFGKRSRE-QLMGRTPQNKAVVM 414
>gi|307564743|ref|ZP_07627271.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella amnii CRIS
21A-A]
gi|307346465|gb|EFN91774.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella amnii CRIS
21A-A]
Length = 442
Score = 357 bits (916), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 189/447 (42%), Positives = 277/447 (61%), Gaps = 35/447 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V ++A+ IFINTC+IR+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCEKEDDADAIFINTCSIRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
KR+ + + + VLGCMAER++D ++D + ++VCGPD+Y +L
Sbjct: 62 ESLHAEKRKGRDLI------------LGVLGCMAERVRDDLID-NHHANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G + LS ETY +I P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PDMIAQCENGNNACDIELSTTETYRNIIPQRIGGNKVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI++EV++L + G KEVTLLGQNVNSY G
Sbjct: 169 GRERSRDVESILQEVNDLKERGFKEVTLLGQNVNSY--------------------GLLP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K K G FA+LL +++ P MR R+T+ +P+D +++L+++ N+C +IH PAQ
Sbjct: 209 NGKRPKNGTSFAELLQKVAQSVPNMRVRFTTSNPEDMTEDILHVVAQEDNLCNHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL+ M R YTRE YL+ V IR IIP+ GL++D G+ E+ E+H TL L++
Sbjct: 269 SGSNTVLKDMNRKYTREEYLEKVAAIRSIIPNCGLTTDIFVGYHNESIEDHHQTLDLVRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A ++ D+V E+ K RRL ELI + + + G
Sbjct: 329 VGFDSAFMFKYSERPGTYAAKHLPDNVSEQEKIRRLNELIHLQTQISAEQNKKDEGKEFD 388
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E K++ D +L+G++ + V
Sbjct: 389 ILIERFGKRSHD-QLMGRNPQNKAVVI 414
>gi|308809858|ref|XP_003082238.1| Predicted Fe-S oxidoreductase (ISS) [Ostreococcus tauri]
gi|116060706|emb|CAL57184.1| Predicted Fe-S oxidoreductase (ISS), partial [Ostreococcus tauri]
Length = 481
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/434 (45%), Positives = 264/434 (60%), Gaps = 63/434 (14%)
Query: 127 DYAEHKVWQRLNYFWFL----KREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDAD 182
D E K+ QRL YF + KR + V R S + G A
Sbjct: 3 DKPEPKICQRLAYFRSIGSMKKRRARPVVGFARGGS-------IAGHRA----------- 44
Query: 183 KMVDVVCGPDAYRDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
GP DLP L++ V G K +N LS+EETYADI PVR + +AFV++M
Sbjct: 45 -------GPGCVSDLPNLIDAVRGTGAKAMNVQLSVEETYADIIPVR-EVGTHSAFVTIM 96
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY-------- 293
RGC+N C+FCIVP+TRGRERSR + SI+ E+ L + G+KEVTLLGQNVNSY
Sbjct: 97 RGCDNACAFCIVPYTRGRERSRDLASIMYEIRSLSERGIKEVTLLGQNVNSYAGDVTSAT 156
Query: 294 --------------------NDTSGMEKEVEPGANWRLSEGFNSMC---KVKKMGLRFAD 330
N +S + A ++GF S + ++ ++FA+
Sbjct: 157 TRDFLSQLVGEDVDAVELVANASSAGLAGAQGSAFVGYADGFKSRYDPERKREGTIQFAE 216
Query: 331 LLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
LLD+++ PEMR R+TSPHPKDFPD++L ++RDRPNV K +H+PAQ+G++A LERM RG
Sbjct: 217 LLDKVASVDPEMRIRFTSPHPKDFPDDVLRVIRDRPNVSKCLHMPAQSGSTATLERMARG 276
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
YTREAY++L+ ++R IIP +++D I GFCGETE +H DT++LM +GY+ A+MFAYS
Sbjct: 277 YTREAYIELIDRVRMIIPGCAVTTDIISGFCGETEADHEDTVSLMTRIGYEQAFMFAYSE 336
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
RE T AHR+ DDVPE+VKQRRL E+I+AFR G+ ++G+ VLVEGP+KK P+
Sbjct: 337 REGTGAHRHQKDDVPEDVKQRRLQEVIDAFRAKAGEKQRMEIGSTHCVLVEGPSKKNPE- 395
Query: 511 ELVGKSDRGHRVAF 524
EL GK+D V F
Sbjct: 396 ELTGKTDTSKWVIF 409
>gi|325268417|ref|ZP_08135049.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella multiformis
DSM 16608]
gi|324989271|gb|EGC21222.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella multiformis
DSM 16608]
Length = 442
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/439 (44%), Positives = 278/439 (63%), Gaps = 35/439 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEEEADAIFLNTCSVRENAENKIYHRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
L E KK GR + VLGCMAER++D ++ + ++VCGPD+Y +L
Sbjct: 62 EA---LHAEQKK----GRGLI-----LGVLGCMAERVRDDLIQ-NHHANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G ++ LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PDMIAQCENGMNAMDIELSTTETYRDVVPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+KEV +L +G KEVTLLGQNVNSY + P N R E
Sbjct: 169 GRERSRDVESILKEVHDLHDKGFKEVTLLGQNVNSYG--------LLP--NGRRPEN--- 215
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
G FA+LL +++ P+MR R+T+ +P+D ++++ + PN+C +IH PAQ
Sbjct: 216 -------GTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDIVEAVAAEPNLCHHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL+ M R YTRE YL V IR+++PD GL++D G+ ETEE+ TL+LM+
Sbjct: 269 SGSNNVLKLMNRKYTREDYLAKVAAIRRLVPDCGLTTDIFIGYHNETEEDFQQTLSLMRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A R+ D+VPEE K RRL ELI E + + G
Sbjct: 329 VGFDSAFMFKYSERPGTYAARHLPDNVPEEEKIRRLNELIRLQTEISAEQNRKDEGREFD 388
Query: 498 VLVEGPNKKAPDTELVGKS 516
+L+E K++ + +L+G++
Sbjct: 389 ILIERFGKRSRE-QLMGRT 406
>gi|325859700|ref|ZP_08172830.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella denticola CRIS
18C-A]
gi|325482626|gb|EGC85629.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella denticola CRIS
18C-A]
Length = 442
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 189/439 (43%), Positives = 278/439 (63%), Gaps = 35/439 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEEEADAIFLNTCSVRENAENKIYHRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++ ++ + + VLGCMAER++D ++ + ++VCGPD+Y +L
Sbjct: 62 EALHAEQKKGRRLI------------LGVLGCMAERVRDDLIQ-NHHANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G ++ LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PDMIAQCENGMNAMDIELSTTETYRDVVPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+KEV +L +G KEVTLLGQNVNSY + P N R E
Sbjct: 169 GRERSRDVESILKEVHDLHDKGFKEVTLLGQNVNSYG--------LLP--NGRRPEN--- 215
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
G FA+LL +++ P+MR R+T+ +P+D ++++ + PN+C +IH PAQ
Sbjct: 216 -------GTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDIVEAIAAEPNLCNHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL+ M R YTRE YL V IR+++PD GL++D G+ ETEE+ TL+LM+
Sbjct: 269 SGSNNVLKLMNRKYTREDYLAKVAAIRRLVPDCGLTTDIFIGYHNETEEDFQQTLSLMRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A R+ D+VPE+ K RRL ELI E + + G
Sbjct: 329 VGFDSAFMFKYSERPGTYAARHLPDNVPEDEKIRRLNELIRLQTEISAEQNRKDEGREFD 388
Query: 498 VLVEGPNKKAPDTELVGKS 516
+L+E K++ + +L+G++
Sbjct: 389 ILIERFGKRSRE-QLMGRT 406
>gi|327312819|ref|YP_004328256.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella denticola
F0289]
gi|326945460|gb|AEA21345.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella denticola
F0289]
Length = 442
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 189/439 (43%), Positives = 277/439 (63%), Gaps = 35/439 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEEEADAIFLNTCSVRENAENKIYHRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++ ++ + + VLGCMAER++D ++ + ++VCGPD+Y +L
Sbjct: 62 EALHAEQKKGRRLI------------LGVLGCMAERVRDDLIQ-NHHANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G ++ LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PDMIAQCENGMNAMDIELSTTETYRDVVPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+KEV +L +G KEVTLLGQNVNSY + P N R E
Sbjct: 169 GRERSRDVESILKEVHDLHDKGFKEVTLLGQNVNSYG--------LLP--NGRRPEN--- 215
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
G FA+LL +++ P MR R+T+ +P+D ++++ + PN+C +IH PAQ
Sbjct: 216 -------GTSFAELLRKVAQSVPNMRVRFTTSNPEDMTEDIVEAIAAEPNLCNHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL+ M R YTRE YL V IR+++PD GL++D G+ ETEE+ TL+LM+
Sbjct: 269 SGSNNVLKLMNRKYTREDYLAKVAAIRRLVPDCGLTTDIFIGYHNETEEDFQQTLSLMRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A R+ D+VPE+ K RRL ELI E + + G
Sbjct: 329 VGFDSAFMFKYSERPGTYAARHLPDNVPEDEKIRRLNELIRLQTEISAEQNRKDEGREFD 388
Query: 498 VLVEGPNKKAPDTELVGKS 516
+L+E K++ + +L+G++
Sbjct: 389 ILIERFGKRSRE-QLMGRT 406
>gi|373499570|ref|ZP_09589978.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Prevotella
micans F0438]
gi|371957286|gb|EHO75053.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Prevotella
micans F0438]
Length = 442
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 190/447 (42%), Positives = 278/447 (62%), Gaps = 35/447 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY N E A+ IF+NTC+IR+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGYDICENENE-ADAIFLNTCSIRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ ++ + + VLGCMAER++D ++ + V++VCGPD+Y +L
Sbjct: 62 DTLHAERKKGRELI------------LGVLGCMAERVRDDLIQ-NHNVNLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G ++ LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PDMIAQCENGHNALDIELSTTETYRDVIPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR V+SI++EV +L ++G KEVTLLGQNVNSY G
Sbjct: 169 GRERSRDVDSILREVADLQEKGFKEVTLLGQNVNSY--------------------GLLP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL ++ PEMR R+T+ +P+D +++L+ + PN+C +IH PAQ
Sbjct: 209 NGKRPENGTSFAELLTIVARSVPEMRVRFTTSNPEDMTEDILHAVAAEPNLCNHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ VL M R YTRE YL V+ IR+IIPD GL++D G+ ETE + TL+LM+
Sbjct: 269 SGSDKVLRLMNRKYTREDYLRKVEAIRRIIPDCGLTTDLFVGYHDETEADQELTLSLMRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D A+MF YS R T+A ++ D+VPEE K RRL ELI E + + + G
Sbjct: 329 VRFDSAFMFKYSERPGTYAAKHMPDNVPEEEKVRRLNELIALQTEISAERNKADEGREFD 388
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E K++ + +L+G++ + V
Sbjct: 389 ILIERFGKRSKE-QLMGRTQQNKAVVI 414
>gi|357043304|ref|ZP_09104999.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Prevotella
histicola F0411]
gi|355368478|gb|EHG15895.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Prevotella
histicola F0411]
Length = 442
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 186/439 (42%), Positives = 278/439 (63%), Gaps = 35/439 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V E A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEEEADAIFLNTCSVRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +R+ ++ + + VLGCMAER+++ ++ + ++VCGPD+Y +L
Sbjct: 62 DTLHAEQRKGRELI------------LGVLGCMAERVRNDLIQ-NHHANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G+ ++ LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PDMIAQCENGRNAMDIELSTTETYRDVIPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+KEV +L +G KEVTLLGQNVNSY G
Sbjct: 169 GRERSRDVESILKEVQDLHDKGFKEVTLLGQNVNSY--------------------GLLP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P+MR R+T+ +P+D ++++ + PN+C +IH PAQ
Sbjct: 209 NGKRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDIIEAVAAEPNLCHHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+++VL+ M R YTRE YL V IR++IPD GL++D G+ ETEE+ TL+LM+
Sbjct: 269 SGSNSVLKLMNRKYTREDYLRKVAAIRRLIPDCGLTTDIFIGYHNETEEDFQQTLSLMRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A ++ D+V E+ K RRL ELI E + + G
Sbjct: 329 VGFDSAFMFKYSERPGTYAAKHLPDNVSEDEKIRRLNELIRLQTEISAEQNKKDEGKEFD 388
Query: 498 VLVEGPNKKAPDTELVGKS 516
+L+E K++ + +L+G++
Sbjct: 389 ILIERFGKRSRE-QLMGRT 406
>gi|288801850|ref|ZP_06407292.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella melaninogenica
D18]
gi|302346093|ref|YP_003814446.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella melaninogenica
ATCC 25845]
gi|288335892|gb|EFC74325.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella melaninogenica
D18]
gi|302149644|gb|ADK95906.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella melaninogenica
ATCC 25845]
Length = 442
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 191/447 (42%), Positives = 280/447 (62%), Gaps = 35/447 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V + A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEDEADAIFLNTCSVRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
L E KK GR + VLGCMAER++D ++ + ++VCGPD+Y +L
Sbjct: 62 EA---LHAEQKK----GRDLI-----LGVLGCMAERVRDDLIQ-NHHANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G ++ LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PDMIAQCENGTNALDIELSTTETYRDVIPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+KEV +L +G KEVTLLGQNVNSY G
Sbjct: 169 GRERSRDVESILKEVKDLHDKGFKEVTLLGQNVNSY--------------------GLLP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G+ FA+LL +++ P+MR R+T+ +P+D ++++ + PN+C +IH PAQ
Sbjct: 209 NGKRPENGVSFAELLHKVAQSVPDMRVRFTTSNPEDMTEDIIEAVATEPNLCNHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+++VL+ M R YTRE YL+ V IR+++PD GL++D G+ E+EE+ TL+LM+
Sbjct: 269 SGSNSVLKVMNRKYTREDYLEKVAAIRRLVPDCGLTTDIFIGYHNESEEDFQQTLSLMRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A ++ D+V EE K RRL ELI E + + G
Sbjct: 329 VGFDSAFMFKYSERPGTYAAKHLPDNVSEEEKIRRLNELIRLQTEISAEQNKKDEGKEFD 388
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E K++ + +L+G++ + V
Sbjct: 389 ILIERFGKRSRE-QLMGRTPQNKAVVM 414
>gi|340351367|ref|ZP_08674287.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella pallens ATCC
700821]
gi|339618734|gb|EGQ23326.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella pallens ATCC
700821]
Length = 464
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/445 (42%), Positives = 278/445 (62%), Gaps = 35/445 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R+Y ETYGCQMNV D E+V S+MK AGY +V A+ IFINTC+IR+ AE+K++ RL
Sbjct: 24 RLYIETYGCQMNVADSEVVASVMKMAGY-DVCEDESQADAIFINTCSIRENAENKIYNRL 82
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ KR+ ++ + + VLGCMAER++ +++ + ++VCGPD+Y +L
Sbjct: 83 ETLYAEKRKGREVI------------LGVLGCMAERVRKDLIE-NHHANLVCGPDSYLNL 129
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + G ++ LS ETY D+ P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 130 PEMIARCENGHNAMDVDLSTTETYKDVVPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 189
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI++EV +L G KEVTLLGQNVNSY G
Sbjct: 190 GRERSRDVESILREVKDLHDRGFKEVTLLGQNVNSY--------------------GLLP 229
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P+MR R+++ +P+D +++L+ + D PN+CK+IH PAQ
Sbjct: 230 NGKRPENGTSFAELLRKVAQSVPDMRVRFSTSNPEDMTEDILHAVADEPNLCKHIHFPAQ 289
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL+ M R YTRE YL+ V IR+IIP+ GL++D G+ ET ++ TL+L++
Sbjct: 290 SGSNTVLKNMNRKYTREDYLEKVAAIRRIIPNCGLTTDIFVGYHNETLDDQELTLSLVRE 349
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+D A+MF YS R T+A ++ D++ EE K RRL ELI+ E + G
Sbjct: 350 CQFDSAFMFKYSERPGTYAAKHLPDNISEEEKVRRLNELIKLQTEISAAQNKKDEGKEFD 409
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
VL+E +K++ + +L+G++++ V
Sbjct: 410 VLIERFSKRSRE-QLMGRTEQNKAV 433
>gi|340350121|ref|ZP_08673122.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella nigrescens
ATCC 33563]
gi|339609604|gb|EGQ14474.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella nigrescens
ATCC 33563]
Length = 464
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 191/467 (40%), Positives = 286/467 (61%), Gaps = 35/467 (7%)
Query: 56 LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENA 115
LA+L + + + E ++Y ETYGCQMNV D E+V S+MK AGY +V + A
Sbjct: 2 LANLPTNTYLCTLRKQEGKLMKKLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEDEA 60
Query: 116 EVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLK 175
+ IF+NTC+IR+ AE+K++ RL + KR+ ++ + + VLGCMAER++
Sbjct: 61 DAIFLNTCSIRENAENKIYNRLETLYAEKRKGREVI------------LGVLGCMAERVR 108
Query: 176 DKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVT 235
++D + ++VCGPD+Y +LP ++ + G ++ LS ETY DI P RI N V+
Sbjct: 109 KDLID-NHHANLVCGPDSYLNLPEMIARCENGHNAMDVDLSTTETYRDIVPQRIGGNRVS 167
Query: 236 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYND 295
FVS+MRGCNN C +CIVPFTRGRERSR VESI++EV +L G KEVTLLGQNVNSY
Sbjct: 168 GFVSIMRGCNNFCHYCIVPFTRGRERSRDVESILREVKDLHDRGFKEVTLLGQNVNSY-- 225
Query: 296 TSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFP 355
G K + G FA+LL +++ P+MR R+++ +P+D
Sbjct: 226 ------------------GLLPNGKRPENGTSFAELLRKVAQSVPDMRVRFSTSNPEDMT 267
Query: 356 DELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSD 415
+++L+ + D PN+C +IH PAQ+G++ VL+ M R YTRE YL+ V IR+IIP+ GL++D
Sbjct: 268 EDILHAVADEPNLCNHIHFPAQSGSNTVLKNMNRKYTREDYLEKVAAIRRIIPNCGLTTD 327
Query: 416 FICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTE 475
G+ ET E+ TL+L++ +D A+MF YS R T+A ++ D++ EE K RRL E
Sbjct: 328 IFVGYHNETLEDQELTLSLVRECQFDSAFMFKYSERPGTYAAKHLPDNISEEEKVRRLNE 387
Query: 476 LIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
LI+ E + G VL+E +K++ + +L+G++++ V
Sbjct: 388 LIKLQTEISAIQNKKDEGKEFDVLIERFSKRSRE-QLMGRTEQNKAV 433
>gi|398342805|ref|ZP_10527508.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Leptospira
inadai serovar Lyme str. 10]
Length = 464
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 192/450 (42%), Positives = 277/450 (61%), Gaps = 47/450 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+M+ A Y E ++ PE ++VIF+NTCAIR+ A K++ R
Sbjct: 26 GKVYIETYGCQMNEYDSGIVTSLMQGAQY-ETVSDPEESDVIFLNTCAIRENAHAKIYGR 84
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L +LK+ ++P ++ VLGCMA+ L + + + +D+V GPD YR
Sbjct: 85 LQSLGYLKK-------------RNPSLVIGVLGCMAQNLGEDLFHQELPLDLVVGPDNYR 131
Query: 196 DLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L+ + G+ ++ T LS ETY +I P + N V AFV++MRGCNN C+FC+VP
Sbjct: 132 SLPDLISRIRTGEHSVSLTRLSKIETYDEIEPRVV--NGVQAFVTIMRGCNNFCTFCVVP 189
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRGRERSR +SIV+E +L +GVK++TLLGQNVNSY
Sbjct: 190 YTRGRERSRDPQSIVRETRDLVAQGVKQLTLLGQNVNSY--------------------- 228
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
K + FA L+ L E R R+TSPHPKDFP LL +M + P C IHL
Sbjct: 229 -------KFEDIDFAGLVRLLLNETEIERIRFTSPHPKDFPLHLLELMAENPRFCPNIHL 281
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ VL M+R Y+RE +L++V +IR +P VGL++D I GF GET+E++ +TL +
Sbjct: 282 PLQSGSTEVLTNMKRVYSREEFLEVVDRIRGYVPQVGLTTDIIVGFPGETDEQYEETLDV 341
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG+DMA+MF YS RE T A + Y DDV EEVK RLT+L++ + + +++G
Sbjct: 342 VRKVGFDMAFMFKYSEREGTIAQKRYPDDVAEEVKGERLTKLVDLQTAISLEQNQARIGK 401
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+EG +KK+ + E+ G++ G F
Sbjct: 402 TYPILIEGISKKSAN-EVCGRTPCGRMTVF 430
>gi|303236111|ref|ZP_07322713.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella disiens
FB035-09AN]
gi|302483693|gb|EFL46686.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella disiens
FB035-09AN]
Length = 443
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/447 (41%), Positives = 279/447 (62%), Gaps = 35/447 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V E A+ IF+NTC+IR+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCEKEEEADAIFLNTCSIRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ KR+ ++ + + VLGCMAER++ +++ + ++VCGPD+Y +L
Sbjct: 62 ETLYAEKRKGREVI------------LGVLGCMAERVRKDLIE-NHYANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + G ++ LS ETY DI P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PEMIARCENGHNAMDVDLSTTETYRDIVPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI++EV +L G KEVTLLGQNVNSY G
Sbjct: 169 GRERSRDVESILREVKDLHDRGFKEVTLLGQNVNSY--------------------GLLP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P+MR R+++ +P+D +++L+ + + PN+C +IH PAQ
Sbjct: 209 NGKRPENGTSFAELLRKVAQSVPDMRVRFSTSNPEDMTEDILHAVAEEPNLCNHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL+ M R YTRE YL+ V IR+IIP+ GL++D G+ ET E+ TL+L++
Sbjct: 269 SGSNKVLKDMNRKYTREDYLEKVAAIRRIIPNCGLTTDIFVGYHDETLEDQELTLSLVRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+D A+MF YS R T+A ++ D+V EE K RRL ELI+ E + Q G
Sbjct: 329 CQFDSAFMFKYSERPGTYAAKHLPDNVSEEEKVRRLNELIKLQTEISAQQNKKDEGKEFD 388
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E +K++ + +L+G++++ V
Sbjct: 389 ILIERFSKRSRE-QLMGRTEQNKAVVI 414
>gi|336397805|ref|ZP_08578605.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella
multisaccharivorax DSM 17128]
gi|336067541|gb|EGN56175.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella
multisaccharivorax DSM 17128]
Length = 457
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/400 (46%), Positives = 252/400 (63%), Gaps = 20/400 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY N E A+ IF+NTC++R+ AE+K++QRL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGYEPTDNEAE-ADAIFLNTCSVRENAENKIYQRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ K++ N G VLGCMAER+KD +++ + ++VCGPDAY L
Sbjct: 62 DQLHADKKKNGLNTVLG-----------VLGCMAERVKDDLVE-NHHANIVCGPDAYMGL 109
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + G ++ LS ETY + P RI N V+ FVS+MRGCNN C +CIVP+TR
Sbjct: 110 PEMMAAAEQGLPAVDVKLSTTETYRSVLPTRIGGNHVSGFVSIMRGCNNFCHYCIVPYTR 169
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI+ EV +L G KEVTLLGQNVNSY ++ P + E
Sbjct: 170 GRERSRDVESILAEVRDLHDRGFKEVTLLGQNVNSYGLQPNGKR---PENGIIIEEDGGQ 226
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
V FA LL ++ P+MR R+T+ +P+D +++L+ + D PN+C +IH PAQ
Sbjct: 227 ELHV----CSFAKLLRSVAEAVPDMRVRFTTSNPEDMTEDILHAVADEPNLCPHIHFPAQ 282
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL M R YTRE YL V IR+IIPD GL++D G+ ETE++ TL+LMK
Sbjct: 283 SGSTKVLRDMNRKYTREEYLARVGTIRRIIPDCGLTTDIFVGYHDETEDDFQQTLSLMKT 342
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
V +D A+MF YS R T+A ++ D+V EE K RRL ELI
Sbjct: 343 VRFDAAFMFKYSERPGTYAAKHLPDNVSEEEKIRRLNELI 382
>gi|260592003|ref|ZP_05857461.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella veroralis
F0319]
gi|260536287|gb|EEX18904.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella veroralis
F0319]
Length = 450
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 183/439 (41%), Positives = 276/439 (62%), Gaps = 35/439 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V + + A+ IF+NTC++R+ AE+K++ RL
Sbjct: 11 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCDNEDEADAIFLNTCSVRENAENKIYHRL 69
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ +K + + VLGCMAER++D ++ + ++VCGPD+Y +L
Sbjct: 70 DTLHAEQKKGRKLI------------LGVLGCMAERVRDDLI-QNHFANLVCGPDSYLNL 116
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G ++ LS ETY D+ P R N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 117 PDMIAQCENGNNALDIELSTTETYRDVIPQRFGGNRVSGFVSIMRGCNNFCHYCIVPFTR 176
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR V+SI+KEV +L +G KEVTLLGQNVNSY G
Sbjct: 177 GRERSRDVDSILKEVKDLHDKGFKEVTLLGQNVNSY--------------------GLLP 216
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P+MR R+T+ +P+D ++++ + PN+C +IH PAQ
Sbjct: 217 NGKRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMTEDIIKAVASEPNLCNHIHFPAQ 276
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL M R YTRE YL V IR++IPD GL++D G+ ETE ++ +TL+LM+
Sbjct: 277 SGSNEVLRLMNRKYTREDYLRKVDTIRRLIPDCGLTTDIFIGYHNETEADYQETLSLMRE 336
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A ++ D+V E+ K RRL ELI E + + G
Sbjct: 337 VGFDSAFMFKYSERPGTYAAKHLPDNVSEDEKIRRLNELIRLQTEISAEQNKKDEGKEFE 396
Query: 498 VLVEGPNKKAPDTELVGKS 516
+L+E K++ + +L+G++
Sbjct: 397 ILIERFGKRSRE-QLMGRT 414
>gi|194335519|ref|YP_002017313.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pelodictyon
phaeoclathratiforme BU-1]
gi|229890587|sp|B4SCB6.1|MIAB_PELPB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|194307996|gb|ACF42696.1| RNA modification enzyme, MiaB family [Pelodictyon
phaeoclathratiforme BU-1]
Length = 440
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 263/445 (59%), Gaps = 42/445 (9%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
Y T+GCQMN D + S+++ AGY + A +I +NTCA+R+ A ++ L +
Sbjct: 10 YIHTFGCQMNQADSATITSLLQQAGYVAA-ESEDRAGIILLNTCAVRENAVDRIEHYLQH 68
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+ K+ + + +LGC+ + ++++ +D++ GPD YR LP+
Sbjct: 69 LQGLKKRDKRLI------------VGILGCIPQHQREEMFATSPAIDLLAGPDTYRTLPQ 116
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L+E+ G K + ++ ETY I PVR + S++AFV VMRGCNNMC++C+VPFTRGR
Sbjct: 117 LIEQARSGAKPFSLDFNVAETYEGIDPVR--QGSISAFVPVMRGCNNMCAYCVVPFTRGR 174
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERS P +++ EV +L G E+TLLGQNVNSY+D
Sbjct: 175 ERSHPFRAVMGEVQKLVASGYSEITLLGQNVNSYDD------------------------ 210
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+ G+ FA LLD +S P+ R R+T+ HPKD EL+ + +RPN+C +IHLP Q+G
Sbjct: 211 --PEQGVNFAALLDAVSCAAPQARVRFTTSHPKDISGELVRTIANRPNICNHIHLPVQSG 268
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++A L RM RG+T E YL+ + IR ++P V LS+D I GFCGE EE+H +L L+ +
Sbjct: 269 STATLGRMNRGHTIEEYLEKIALIRSLLPGVTLSTDIIAGFCGEQEEDHQASLELLSTLR 328
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D AYMF YS R T A R VDDVPE VK+RRL E+I+ +G+ + +G+V VL
Sbjct: 329 FDSAYMFYYSTRPGTFAARTLVDDVPEVVKKRRLQEIIDLQNTISGELFQQAIGSVVEVL 388
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
E +K++ + +L+G++ V F
Sbjct: 389 AESESKRSAE-QLMGRTPGNRAVVF 412
>gi|410940489|ref|ZP_11372295.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira noguchii str.
2006001870]
gi|410784371|gb|EKR73356.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira noguchii str.
2006001870]
Length = 428
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 190/438 (43%), Positives = 273/438 (62%), Gaps = 45/438 (10%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ RL +LK+
Sbjct: 1 MNEYDSGIVSSLMKDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNRLQSLGYLKKR- 58
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
N+ G VLGCMA+ L D + + +D+V GPD YR LP L++ + G
Sbjct: 59 NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRSLPELIQRIRGG 107
Query: 208 QKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVE 266
+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+TRGRERSR +
Sbjct: 108 ENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPYTRGRERSRDPK 165
Query: 267 SIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGL 326
SIV+EV +L ++G++++TLLGQNVNSY E++ + R+
Sbjct: 166 SIVREVQDLVQKGIRQITLLGQNVNSYK-----EQDTDFAGLIRM--------------- 205
Query: 327 RFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLER 386
LLD S+E R R+TSPHPKDFP LL +M + P C IHLP Q GN+ VLE
Sbjct: 206 ----LLDETSIE----RIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLPLQAGNTRVLEE 257
Query: 387 MRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMF 446
M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL +++ V +DMA+MF
Sbjct: 258 MKRSYSKEEFLDVVKEIRNIVPDVGITTDIIVGFPNETEEEFEDTLAVVREVQFDMAFMF 317
Query: 447 AYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKK 506
YS RE T A R D+VPEEVK RLT+L++ + + +++G V +L+E ++K
Sbjct: 318 KYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRVYSILIENISRK 377
Query: 507 APDTELVGKSDRGHRVAF 524
+ + +L G++ G F
Sbjct: 378 S-EKQLCGRTPCGRMTVF 394
>gi|445116928|ref|ZP_21378679.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella nigrescens
F0103]
gi|444839955|gb|ELX67000.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella nigrescens
F0103]
Length = 464
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 189/467 (40%), Positives = 286/467 (61%), Gaps = 35/467 (7%)
Query: 56 LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENA 115
LA+L + + + E ++Y ETYGCQMNV D E+V S+MK AGY +V + A
Sbjct: 2 LANLPTNTYLCTLRKQEGKLMKKLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEDEA 60
Query: 116 EVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLK 175
+ IF+NTC+IR+ AE+K++ RL + K++ ++ + + VLGCMAER++
Sbjct: 61 DAIFLNTCSIRENAENKIYNRLETLYAEKKKGREVI------------LGVLGCMAERVR 108
Query: 176 DKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVT 235
++D + ++VCGPD+Y +LP ++ + G ++ LS ETY +I P RI N V+
Sbjct: 109 KDLID-NHHANLVCGPDSYLNLPEMIARCENGHNAMDVDLSTTETYRNIVPQRIGGNRVS 167
Query: 236 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYND 295
FVS+MRGCNN C +CIVPFTRGRERSR VESI++EV +L G KEVTLLGQNVNSY
Sbjct: 168 GFVSIMRGCNNFCHYCIVPFTRGRERSRDVESILREVKDLHDRGFKEVTLLGQNVNSY-- 225
Query: 296 TSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFP 355
G K + G FA+LL +++ P+MR R+++ +P+D
Sbjct: 226 ------------------GLLPNGKRPENGTSFAELLRKVAQSVPDMRVRFSTSNPEDMT 267
Query: 356 DELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSD 415
+++L+ + D PN+C +IH PAQ+G++ VL+ M R YTRE YL+ V IR+IIP+ GL++D
Sbjct: 268 EDILHAVADEPNLCNHIHFPAQSGSNTVLKNMNRKYTREDYLEKVAAIRRIIPNCGLTTD 327
Query: 416 FICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTE 475
G+ ET E+ TL+L++ +D A+MF YS R T+A ++ D++ EE K RRL E
Sbjct: 328 IFVGYHNETLEDQELTLSLVRECQFDSAFMFKYSERPGTYAAKHLPDNISEEEKVRRLNE 387
Query: 476 LIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
LI+ E + G VL+E +K++ + +L+G++++ V
Sbjct: 388 LIKLQTEISAIQNKKDEGKEFDVLIERFSKRSRE-QLMGRTEQNKAV 433
>gi|383810742|ref|ZP_09966230.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
306 str. F0472]
gi|383356590|gb|EID34086.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella sp. oral taxon
306 str. F0472]
Length = 442
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/439 (41%), Positives = 276/439 (62%), Gaps = 35/439 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V + + A+ IF+NTC++R+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCDNEDEADAIFLNTCSVRENAENKIYHRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +++ +K + + VLGCMAER++D ++ + ++VCGPD+Y +L
Sbjct: 62 DTLHAEQKKGRKLI------------LGVLGCMAERVRDDLIQ-NHFANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + + G ++ LS ETY D+ P R N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PDMIAQCENGNNALDIELSTTETYRDVIPQRFGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR V+SI+KEV +L +G KEVTLLGQNVNSY G
Sbjct: 169 GRERSRDVDSILKEVKDLHDKGFKEVTLLGQNVNSY--------------------GLLP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P+MR R+T+ +P+D +++ + PN+C +IH PAQ
Sbjct: 209 NGKRPENGTSFAELLRKVAQSVPDMRVRFTTSNPEDMTVDIIEAVASEPNLCNHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL M R YTRE YL ++ IR++IPD GL++D G+ ETE ++ +TL+LM+
Sbjct: 269 SGSNKVLRLMNRKYTREDYLSNIEAIRRLIPDCGLTTDIFIGYHDETEADYQETLSLMRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A ++ D+V E+ K RRL ELI E + + G
Sbjct: 329 VGFDSAFMFKYSERPGTYAAKHLPDNVSEDEKIRRLNELIRLQTEISAEQNKKDEGKEFE 388
Query: 498 VLVEGPNKKAPDTELVGKS 516
+L+E K++ + +L+G++
Sbjct: 389 ILIERFGKRSRE-QLMGRT 406
>gi|456985651|gb|EMG21406.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 428
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/438 (42%), Positives = 269/438 (61%), Gaps = 45/438 (10%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN D IV S+M++A YS + PEN+++IF+NTCAIR+ A K++ RL +LK+
Sbjct: 1 MNEYDSGIVSSLMRDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNRLQSLGYLKKR- 58
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
N+ G VLGCMA+ L D + + +D+V GPD YR LP L++ + G
Sbjct: 59 NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRSLPELIQRIRKG 107
Query: 208 QKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVE 266
+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+TRGRERSR +
Sbjct: 108 ENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPYTRGRERSREPK 165
Query: 267 SIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGL 326
SIV+EV +L ++G++++TLLGQNVNSY K+
Sbjct: 166 SIVREVQDLVQKGIRQITLLGQNVNSY----------------------------KEQDT 197
Query: 327 RFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLER 386
FA L+ L E R R+TSPHPKDFP LL +M + P C IHLP Q GN+ VLE
Sbjct: 198 DFAGLIQMLLDETSIERIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLPLQAGNTRVLEE 257
Query: 387 MRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMF 446
M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL +++ V +DMA+MF
Sbjct: 258 MKRSYSKEEFLDVVKEIRNIVPDVGITTDIIVGFPNETEEEFEDTLAVVREVQFDMAFMF 317
Query: 447 AYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKK 506
YS RE T A R D+VPEEVK RLT+L++ + + +++G V +L+E ++K
Sbjct: 318 KYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRVYSILIENISRK 377
Query: 507 APDTELVGKSDRGHRVAF 524
+ + +L G++ G F
Sbjct: 378 S-EKQLCGRTPCGRMTVF 394
>gi|456971134|gb|EMG11805.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
Length = 428
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/438 (42%), Positives = 269/438 (61%), Gaps = 45/438 (10%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN D IV S+M++A YS + PEN+++IF+NTCAIR+ A K++ RL +LK+
Sbjct: 1 MNEYDSGIVSSLMRDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNRLQSLGYLKKR- 58
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
N+ G VLGCMA+ L D + + +D+V GPD YR LP L++ + G
Sbjct: 59 NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRSLPELIQRIRKG 107
Query: 208 QKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVE 266
+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+TRGRERSR +
Sbjct: 108 ENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPYTRGRERSRDPK 165
Query: 267 SIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGL 326
SIV+EV +L ++G++++TLLGQNVNSY K+
Sbjct: 166 SIVREVQDLVQKGIRQITLLGQNVNSY----------------------------KEQDT 197
Query: 327 RFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLER 386
FA L+ L E R R+TSPHPKDFP LL +M + P C IHLP Q GN+ VLE
Sbjct: 198 DFAGLIQMLLDETSIERIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLPLQAGNTRVLEE 257
Query: 387 MRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMF 446
M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL +++ V +DMA+MF
Sbjct: 258 MKRSYSKEEFLDVVKEIRNIVPDVGITTDIIVGFPNETEEEFEDTLAVVREVQFDMAFMF 317
Query: 447 AYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKK 506
YS RE T A R D+VPEEVK RLT+L++ + + +++G V +L+E ++K
Sbjct: 318 KYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRVYSILIENISRK 377
Query: 507 APDTELVGKSDRGHRVAF 524
+ + +L G++ G F
Sbjct: 378 S-EKQLCGRTPCGRMTVF 394
>gi|387132633|ref|YP_006298605.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella intermedia 17]
gi|386375481|gb|AFJ07986.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Prevotella intermedia 17]
Length = 443
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/445 (41%), Positives = 278/445 (62%), Gaps = 35/445 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNV D E+V S+MK AGY +V + A+ IF+NTC+IR+ AE+K++ RL
Sbjct: 3 KLYIETYGCQMNVADSEVVASVMKMAGY-DVCENEDEADAIFLNTCSIRENAENKIYNRL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ K++ ++ + + VLGCMAER++ +++ + ++VCGPD+Y +L
Sbjct: 62 ETLYAEKKKGREVI------------LGVLGCMAERVRKDLIE-NHHANLVCGPDSYLNL 108
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ + G ++ LS ETY DI P RI N V+ FVS+MRGCNN C +CIVPFTR
Sbjct: 109 PEMIARCENGHNAMDVDLSTTETYRDIVPQRIGGNRVSGFVSIMRGCNNFCHYCIVPFTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR VESI++EV +L G KEVTLLGQNVNSY G
Sbjct: 169 GRERSRDVESILREVKDLHDRGFKEVTLLGQNVNSY--------------------GLLP 208
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K + G FA+LL +++ P+MR R+++ +P+D +++L+ + D PN+C +IH PAQ
Sbjct: 209 NGKRPENGTSFAELLRKVAQSVPDMRVRFSTSNPEDMTEDILHAVADEPNLCNHIHFPAQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++ VL+ M R YTRE YL+ V IR+IIP+ GL++D G+ ET E+ TL+L++
Sbjct: 269 SGSNTVLKNMNRKYTREDYLEKVAAIRRIIPNCGLTTDIFVGYHNETLEDQELTLSLVRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+D A+MF YS R T+A ++ D++ EE K RRL ELI+ E + G
Sbjct: 329 CQFDSAFMFKYSERPGTYAAKHLPDNISEEEKVRRLNELIKLQTEISAIQNKKDEGKEFD 388
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
VL+E +K++ + +L+G++++ V
Sbjct: 389 VLIERFSKRSRE-QLMGRTEQNKAV 412
>gi|418721784|ref|ZP_13280958.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira borgpetersenii
str. UI 09149]
gi|421095826|ref|ZP_15556534.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira borgpetersenii
str. 200801926]
gi|410361241|gb|EKP12286.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira borgpetersenii
str. 200801926]
gi|410741828|gb|EKQ90581.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira borgpetersenii
str. UI 09149]
Length = 428
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 188/440 (42%), Positives = 269/440 (61%), Gaps = 49/440 (11%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ RL +LK
Sbjct: 1 MNEYDSGIVSSLMKDAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNRLQSLGYLK--- 56
Query: 148 KKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVD 205
K P++V VLGCMA+ L D + + +D+V GPD YR LP L++ +
Sbjct: 57 -----------KRNPELVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNYRSLPELIQRIR 105
Query: 206 YGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRP 264
G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+TRGRERSR
Sbjct: 106 SGEHSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPYTRGRERSRD 163
Query: 265 VESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKM 324
+SIV+E+ +L ++G++++TLLGQNVNSY K+
Sbjct: 164 PKSIVREIQDLTEKGIRQITLLGQNVNSY----------------------------KEQ 195
Query: 325 GLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVL 384
G FA L+ L E R R+TSPHPKDFP LL +M P C IHLP Q GN+ VL
Sbjct: 196 GTDFAGLIQMLLDETTIERIRFTSPHPKDFPVRLLRLMAQNPRFCPNIHLPLQAGNTRVL 255
Query: 385 ERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAY 444
E M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL +++ V +DMA+
Sbjct: 256 EEMKRSYSKEEFLDVVREIRNIVPDVGITTDIIVGFPNETEEEFEDTLAVVREVQFDMAF 315
Query: 445 MFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPN 504
MF YS RE T A + D+VPEE K RLT+L++ + + +++G V +L+E +
Sbjct: 316 MFKYSEREGTMARKKLPDNVPEETKSARLTKLVDLQTSISHEQNRARIGRVYSILIENTS 375
Query: 505 KKAPDTELVGKSDRGHRVAF 524
+K+ + +L G++ G F
Sbjct: 376 RKS-EKQLCGRTPCGRMTVF 394
>gi|194334797|ref|YP_002016657.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Prosthecochloris aestuarii DSM 271]
gi|229890596|sp|B4S564.1|MIAB_PROA2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|194312615|gb|ACF47010.1| RNA modification enzyme, MiaB family [Prosthecochloris aestuarii
DSM 271]
Length = 441
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/442 (42%), Positives = 268/442 (60%), Gaps = 42/442 (9%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMN D EI+ S++ GY ++ ++A+++ +NTCA+R+ A K+ L+
Sbjct: 9 TFGCQMNQADTEIISSLLTAEGYC-LVAEEDDADLVMLNTCAVRENAVEKIMHHLDSLKG 67
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
L+R + V V+GC+ + ++++ ++D + GPD+YR LP L+
Sbjct: 68 LRRRRRGLVVG------------VIGCVPQYYREEMFQKSGVIDFIAGPDSYRKLPGLIR 115
Query: 203 EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERS 262
G +G L+ ETY DI P+R S++AF+ VMRGCNNMC+FC+VPFTRGRERS
Sbjct: 116 NAFQGIRGAELFLTQSETYGDIEPMR--SGSISAFIPVMRGCNNMCAFCVVPFTRGRERS 173
Query: 263 RPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVK 322
R ++S++ EV L +G +E+TLLGQNVNSY D E GA+
Sbjct: 174 RSLQSVLDEVRRLEGQGYRELTLLGQNVNSYRDD-------EAGAD-------------- 212
Query: 323 KMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSA 382
FA LLD +S EMR R+T+ HPKD ++L+ ++ R NVC IHLP Q+G+S
Sbjct: 213 -----FALLLDEVSKAAGEMRVRFTTSHPKDISEDLVNVVAQRENVCNAIHLPVQSGSSR 267
Query: 383 VLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDM 442
+LE M RG+TR YLD + IR +P V LS+D I GFCGETEE+H TL+LM+ V +D
Sbjct: 268 MLEVMHRGHTRREYLDKIAMIRSAVPGVALSTDLIAGFCGETEEDHLQTLSLMEEVRFDY 327
Query: 443 AYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEG 502
AYMF YS+R T+A R+ DDV E K+RRL E+I+ +G+ + + VG+VQ VL E
Sbjct: 328 AYMFYYSVRPGTYAARHLTDDVALEEKKRRLQEIIDLQSGISGEIFGNDVGSVQEVLAES 387
Query: 503 PNKKAPDTELVGKSDRGHRVAF 524
++++ D L+G+SD V F
Sbjct: 388 ESRRSSDM-LMGRSDTNRVVVF 408
>gi|374583918|ref|ZP_09657010.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptonema illini DSM
21528]
gi|373872779|gb|EHQ04773.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptonema illini DSM
21528]
Length = 473
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/451 (43%), Positives = 266/451 (58%), Gaps = 50/451 (11%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
I+ ETYGCQMN D IV S+ K+ GYS + E A VI +NTCA+R+ A +V+ RL
Sbjct: 29 IFVETYGCQMNEYDSGIVRSLFKDRGYS-AVRSEEEAGVILLNTCAVREKAHERVYGRLQ 87
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVV--LGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+LK K P++V+ LGCMA+ L + + VD++ GPD YR+
Sbjct: 88 SLSYLK--------------KRNPRLVIGILGCMAQNLGEDLFAMGLPVDLILGPDNYRN 133
Query: 197 LPRLLEEV--DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L++ + + G+ T +S ETY ++ P +S AFV++MRGCNN C+FC+VP
Sbjct: 134 LPELIDRMRDEPGRSYQLTRISSTETYEELEPEVVS--GPLAFVTIMRGCNNFCTFCVVP 191
Query: 255 FTRGRERSRPVESIVKEVDELW-KEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
+TRGRERSR SIV+EV L + GV+E+TLLGQNVNSY SG +
Sbjct: 192 YTRGRERSREPGSIVREVQNLIDRRGVREITLLGQNVNSYRHESGGD------------- 238
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
F DL+ RL E R R+TSPHP DFP+ LL +M + C IH
Sbjct: 239 --------------FTDLVKRLLDETSIRRIRFTSPHPHDFPERLLRLMAETDRFCSSIH 284
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
+P Q+G++ VL RMRR YT E Y+DLV IR I+PDV L++D I GF GETEE+ TL
Sbjct: 285 MPVQSGSTEVLRRMRRDYTAEEYMDLVSLIRDIVPDVELTTDVIVGFPGETEEDFQKTLD 344
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L++ VGY+ AYMF YS RE T A + Y DDVPEEVK RLT LI +G+ + G
Sbjct: 345 LVEKVGYEKAYMFHYSEREHTAAKKQYADDVPEEVKLERLTRLIALQTRISGERNRADHG 404
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+EGP++++ D E +G+++ G V
Sbjct: 405 REYDILLEGPSRRS-DKEWMGRTESGKVVVM 434
>gi|339249691|ref|XP_003373833.1| putative radical SAM domain protein [Trichinella spiralis]
gi|316969966|gb|EFV53984.1| putative radical SAM domain protein [Trichinella spiralis]
Length = 405
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 180/358 (50%), Positives = 235/358 (65%), Gaps = 23/358 (6%)
Query: 168 GCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV 227
GCMA+R +VD++ GPDAYRDLPRL+ + GQ+ +NT+ S +ETYADI PV
Sbjct: 16 GCMAKRSAHPSGSEVGLVDLIAGPDAYRDLPRLIASCETGQQAVNTIFSYDETYADIHPV 75
Query: 228 RISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLG 287
R +S S+MRGC+NMCS+C+VPFTRG E+SRP GVKEVTLLG
Sbjct: 76 RRDSSSQ----SIMRGCSNMCSYCVVPFTRGFEKSRP--------------GVKEVTLLG 117
Query: 288 QNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYT 347
QNVNSY D V+ L+ GF ++ K KK G+RFA+LL RLS +R R+T
Sbjct: 118 QNVNSYCDADPSSTIVD--GQLYLASGFVNVVKRKKCGIRFAELLQRLSNINSNVRIRFT 175
Query: 348 SPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII 407
SPHPKDFPDE+L ++R+ PN+C +HLPAQ+G++ VL+RM RGYT EAY++LV+KI+ I
Sbjct: 176 SPHPKDFPDEVLDVIRNHPNICNSVHLPAQSGSNNVLQRMHRGYTVEAYMNLVEKIKDKI 235
Query: 408 PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEE 467
P V L+SDFI GFCGET+E+H T+ L+K V Y Y F YSMRERT AHR Y DDVP +
Sbjct: 236 PGVTLTSDFISGFCGETDEDHEQTVQLIKNVQYSYCYTFVYSMRERTKAHRRYCDDVPID 295
Query: 468 VKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTEL-VGKSDRGHRVAF 524
VK+ R +L FR+ +G VLVE +K++ TE +G+SD ++ F
Sbjct: 296 VKKARSQQLQNEFRKGALILNRKFIGKTLTVLVEKESKRS--TEFWMGRSDGNLKIIF 351
>gi|418750263|ref|ZP_13306549.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira licerasiae
str. MMD4847]
gi|404272866|gb|EJZ40186.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira licerasiae
str. MMD4847]
Length = 428
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/440 (43%), Positives = 275/440 (62%), Gaps = 49/440 (11%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN D IV S+M+ A + E ++ PE ++VIF+NTCAIR+ A K++ RL +LK+
Sbjct: 1 MNEYDSGIVSSLMQGAQF-ETVSDPELSDVIFLNTCAIRENAHAKIYGRLQSLGYLKK-- 57
Query: 148 KKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDY 206
++P ++ VLGCMA+ L D + + +D+V GPD YR LP L++ +
Sbjct: 58 -----------RNPDLVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNYRTLPELIQTIRS 106
Query: 207 GQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPV 265
++ ++ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+TRGRERSR
Sbjct: 107 DKQPVSLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPYTRGRERSRDP 164
Query: 266 ESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMG 325
SIV+E +L +GVK++TLLGQNVNSY SEGF+
Sbjct: 165 HSIVRETRDLVAQGVKQLTLLGQNVNSYK-----------------SEGFD--------- 198
Query: 326 LRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVL 384
FA L+ RL LE ++ R R+TSPHPKDFP LL +M + P C IHLP Q+GN+ VL
Sbjct: 199 --FAGLV-RLLLEETDIERIRFTSPHPKDFPMHLLELMAENPRFCPNIHLPLQSGNTDVL 255
Query: 385 ERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAY 444
E M+R Y++E +L++V +I+ I+P+VGL++D I GF GET+E+ DTL +++ VG+DMA+
Sbjct: 256 ENMKRTYSKEEFLEVVDQIKTIVPNVGLTTDIIVGFPGETDEQFEDTLDMVRKVGFDMAF 315
Query: 445 MFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPN 504
MF YS RE T A + Y DDVPEEVK RLT+L++ + + +++G +LVEG +
Sbjct: 316 MFKYSEREGTIAQKRYPDDVPEEVKGERLTKLVDLQTSISAEQNKARIGKTFPILVEGAS 375
Query: 505 KKAPDTELVGKSDRGHRVAF 524
KK+ E G++ G F
Sbjct: 376 KKS-SKEACGRTPCGRMTVF 394
>gi|256370749|ref|YP_003108574.1| RNA modification protein, MiaB family [Candidatus Sulcia muelleri
SMDSEM]
gi|256009541|gb|ACU52901.1| RNA modification protein, MiaB family [Candidatus Sulcia muelleri
SMDSEM]
Length = 458
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/433 (41%), Positives = 278/433 (64%), Gaps = 24/433 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y E YGCQMN++D EIV SI+ N G+ + ++ +NA +I INTC+IR+ +E+K+ R+
Sbjct: 5 KYYIENYGCQMNISDSEIVCSILDNEGFIQT-DLIQNANIILINTCSIREKSENKILLRI 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
N +LK +KKN+ G +LGCMAE K K +K+V+++ GPD+YR+L
Sbjct: 64 NQIKYLK-NYKKNLIIG-----------ILGCMAEIFKKKFFKINKIVNLILGPDSYREL 111
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L++++ + K INT S ETY+DI P R K +TAFV++MRGC+NMC+FC+VPFT
Sbjct: 112 PFLIKKILNQNGKYINTYFSNNETYSDILPKR-KKEKITAFVTIMRGCDNMCTFCVVPFT 170
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE+SR SI+KE + L+++G KE+ LLGQNV+SY G K+ ++ L N
Sbjct: 171 RGREKSRDPISILKECEFLFQKGFKEIILLGQNVDSYFWYGGGLKKNFNKFSFSLKN--N 228
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
++ + F LL+ ++ P MR R+ + +P +L +M+ N+CK+IHLP
Sbjct: 229 TI-------INFPKLLELVAKTVPFMRIRFWTSNPNQITFNVLNVMKKYKNICKHIHLPV 281
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L M R Y+RE Y+ L+ +I +IIP+ +S D I GFC E+E++H +TL LM
Sbjct: 282 QSGSNKILSLMNRKYSREEYILLINQIYKIIPNCSISCDIITGFCNESEKDHNETLNLMN 341
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ +YMF YS R+ T+A + + D+V +K+RRLTE+I R+ + +G +Q
Sbjct: 342 YVKYNFSYMFIYSPRKLTYAFKKFNDNVSLTIKKRRLTEIINLQRKHSYYRLKKSIGKIQ 401
Query: 497 LVLVEGPNKKAPD 509
+L+EG +KK+ +
Sbjct: 402 EILIEGISKKSRN 414
>gi|373461693|ref|ZP_09553431.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella maculosa OT
289]
gi|371951585|gb|EHO69430.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Prevotella maculosa OT
289]
Length = 430
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/435 (42%), Positives = 268/435 (61%), Gaps = 36/435 (8%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MNV D E+V S+MK AGY +V E A+ IF+NTC++R+ AE+K++ RL+ +++
Sbjct: 1 MNVADSEVVASVMKMAGY-DVCEHEEEADAIFLNTCSVRENAENKIYNRLDTLHAEQKKG 59
Query: 148 KKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYG 207
++ + + VLGCMAER+KD ++ + +VCGPD+Y +LP ++ E + G
Sbjct: 60 RRLI------------LGVLGCMAERVKDDLV-KNHHASLVCGPDSYLNLPSMIAECELG 106
Query: 208 QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVES 267
++T LS ETY D+ P RI V+ FVS+MRGCNN C +CIVPFTRGRERSR VES
Sbjct: 107 HASVDTELSTTETYRDVLPQRIG-GRVSGFVSIMRGCNNFCHYCIVPFTRGRERSRDVES 165
Query: 268 IVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLR 327
I+ EV +L +G KEVTLLGQNVNSY G K + G
Sbjct: 166 ILAEVKDLHDKGFKEVTLLGQNVNSY--------------------GLLPNGKRPENGTS 205
Query: 328 FADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERM 387
FA+LL +++ P+MR R+T+ +P+D +++LY + D PN+C +IH PAQ+G+ +L M
Sbjct: 206 FAELLRKVAQSVPDMRVRFTTSNPEDMSEDILYAIADEPNLCNHIHFPAQSGSDKILHLM 265
Query: 388 RRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFA 447
R YTRE YL+ V I++IIPD GL++D G+ ETEE+ TL+L+K VG+D A+MF
Sbjct: 266 NRKYTREDYLNKVAAIKRIIPDCGLTTDIFVGYHNETEEDQQLTLSLVKEVGFDSAFMFK 325
Query: 448 YSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKA 507
YS R T+A ++ D+VPE VK RL ELI+ + + G ++L E +KK
Sbjct: 326 YSERPGTYAAKHLADNVPEAVKIARLNELIQLQTAISAEQNKKDEGKDFVILTERFSKKD 385
Query: 508 PDTELVGKSDRGHRV 522
+ L+G++++ V
Sbjct: 386 RN-HLMGRTEQNKAV 399
>gi|357421083|ref|YP_004928532.1| RNA modification protein [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
gi|354803593|gb|AER40707.1| RNA modification protein [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
Length = 452
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/452 (40%), Positives = 271/452 (59%), Gaps = 47/452 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
Y E+YGCQMNV+D EI++SI+ G+ N+ + A +I +NTCAIR+ AE + RL
Sbjct: 8 YIESYGCQMNVSDTEIIISILLKNGFLFTENLKK-ANIILLNTCAIREKAELTIKNRLQQ 66
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAE---RLKDKILDADKMVDVVCGPDAYRD 196
L + KK+ G +LGC+++ ++D ++D GPD+Y+
Sbjct: 67 ---LIKNKKKSTLLG-----------ILGCLSKISVSMRDHF---SNIIDFSVGPDSYKS 109
Query: 197 LPRLLEEVDYGQKGINTLL-SLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
+P ++ + G+K L + +ETY+D++P R KN +T F+S+ RGCNNMCSFCIVPF
Sbjct: 110 IPNIISSLMKGKKNPKIFLKNQKETYSDVNPFR-KKNKITTFLSITRGCNNMCSFCIVPF 168
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY---NDTSGMEKEVEPGANWRLS 312
TRGRERSR SI++E L+K G KEVTLLGQNV+SY ND +
Sbjct: 169 TRGRERSRNPYSIIEECKNLYKNGFKEVTLLGQNVDSYLWINDQKTI------------- 215
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
K+ + F++LLD L+ E P MR R+++ +P D D+++ I+ N+CK+I
Sbjct: 216 -------KINNDKIDFSNLLDLLATEIPFMRIRFSTSNPHDMSDKVIEIISKYSNICKHI 268
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G++ +L+ M R YTRE YL L++KIR IP+ +S D I GFC E E++H T+
Sbjct: 269 HLPVQSGSNKILKLMNRKYTREKYLSLIKKIRSKIPECSISHDIITGFCDEEEKDHQQTI 328
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+LM V Y+ YMF+YS R T+A+R D+VPE +K+RRL E+I+ R + +
Sbjct: 329 SLMNEVKYNYGYMFSYSPRPGTYAYRKLKDNVPEYIKKRRLREIIDLQRNHSFVHMKKNI 388
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G +Q VL+EG +KK D + GK+ + V F
Sbjct: 389 GKIQEVLIEGESKKN-DQDWYGKTTQNTVVVF 419
>gi|262340984|ref|YP_003283839.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
synthetase [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272321|gb|ACY40229.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
synthetase [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 453
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 171/428 (39%), Positives = 265/428 (61%), Gaps = 39/428 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
Y E YGCQMN++D EIV+SI+ N G+ + N E A++I N+C+IR+ AE + +RL
Sbjct: 15 FYIENYGCQMNLSDSEIVISILSNDGFV-LSNNLEKADIILFNSCSIREKAELTLKKRLE 73
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
FLK++ K V+GC+++++ + +++ +K +D P++Y+ +
Sbjct: 74 QLQFLKKKKKTLFG-------------VIGCLSKKIINFLIE-EKKIDFFVNPNSYKKIS 119
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+ G+K ++ ETY+DI P +++ VT F+S+ RGC+NMC+FCIVPFTRG
Sbjct: 120 DFIRYAMDGKKSLHLNHQKNETYSDIQPFYLNQKKVTTFLSITRGCDNMCTFCIVPFTRG 179
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERS SI+++ L++ G KE+TLLGQNV+SY R S+GF
Sbjct: 180 RERSSSPYSIIEQCKHLYQNGYKEITLLGQNVDSY----------------RWSKGF--- 220
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
+ + F++LL+ L+LE P MR R+++ +P D D++L I+ PN+CK+IHLP Q+
Sbjct: 221 -----ITIGFSELLNLLALEIPSMRIRFSTSNPHDMSDKVLEIISKHPNICKHIHLPVQS 275
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ +L M R YTRE YL LV +IR IIP+ +S D + GFC E E++H DT+ LM +
Sbjct: 276 GSNKILRLMNRKYTREKYLSLVNRIRTIIPECSISHDIMTGFCNEEEKDHQDTIDLMNKI 335
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
Y+ YMF+YS R T+A+RN D+VP++VK++RL E+I+ R + +G VQ +
Sbjct: 336 QYNYGYMFSYSPRPGTYAYRNLQDNVPKDVKKKRLKEIIDLQRNHSSFRMKEYLGKVQEI 395
Query: 499 LVEGPNKK 506
L+EG +KK
Sbjct: 396 LIEGESKK 403
>gi|293977904|ref|YP_003543334.1| tRNA-i(6)A37 thiotransferase protein MiaB [Candidatus Sulcia
muelleri DMIN]
gi|292667835|gb|ADE35470.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Sulcia
muelleri DMIN]
Length = 455
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 180/435 (41%), Positives = 267/435 (61%), Gaps = 32/435 (7%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+ + Y E YGCQMN++D EIV SI+ N G+ + N+ E A +I INTC+IRD +E K+
Sbjct: 3 KKKFYIENYGCQMNISDSEIVSSILNNKGFIKTENLKE-ANIILINTCSIRDKSEKKILL 61
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
R+N F+ KKN + I +LGCMA + K+ + K++++V GPD+YR
Sbjct: 62 RINQIKFI---IKKN---------NDILIGILGCMASKFKN--IKEKKLINLVVGPDSYR 107
Query: 196 DLPRLLEEVDYGQKG----INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
++P L+ + +KG I+T S ETYADI P R K +TAFV++MRGC+NMC+FC
Sbjct: 108 EIPNLINNF-FKKKGEYISISTSFSKTETYADIIPKREEK-KITAFVTIMRGCDNMCTFC 165
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
+VPFTRGRE+SR SI+KE L+K+G KE+ LLGQNV+SY G K+ +
Sbjct: 166 VVPFTRGREKSRDPYSIIKECKFLFKKGYKEIILLGQNVDSYLWYGGGLKKKFKIKEIKN 225
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
E N F+ LL+ +++ P MR R+ + +P D D +L +++ N+CK+
Sbjct: 226 EEIIN-----------FSKLLELVAISVPLMRIRFCTSNPNDMSDNVLNVIKKYINICKH 274
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLP Q+G++ +L M R +T E Y+ L+ KI++IIP+ LS D I GFC E E +H +T
Sbjct: 275 IHLPVQSGSNRILSLMNRKHTCEDYILLINKIKKIIPNCSLSCDIITGFCNENENDHNET 334
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L LM V Y+ +YMF YS R T+A++ +D+V K+RRLTE+I + +
Sbjct: 335 LNLMNYVKYNFSYMFIYSHRIGTYAYKKLIDNVSLSTKKRRLTEIINLQKTHSYYRNRKY 394
Query: 492 VGTVQLVLVEGPNKK 506
+G++Q +L+EG + K
Sbjct: 395 IGSIQDILIEGISTK 409
>gi|161833793|ref|YP_001597989.1| RNA modification protein [Candidatus Sulcia muelleri GWSS]
gi|229891010|sp|A8Z642.1|MIAB_SULMW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|152206283|gb|ABS30593.1| RNA modification enzyme, MiaB family [Candidatus Sulcia muelleri
GWSS]
Length = 453
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/433 (41%), Positives = 266/433 (61%), Gaps = 30/433 (6%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+ + Y E YGCQMN++D EIV SI+ N G+ + N+ E A +I INTC+IRD +E K+
Sbjct: 3 KKKFYIENYGCQMNISDSEIVSSILNNKGFIKTENLKE-ANIILINTCSIRDKSEKKILL 61
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
R+N F+ KKN + I +LGCMA + K+ + K++++V GPD+YR
Sbjct: 62 RINQIKFI---IKKN---------NDILIGILGCMAYKFKN--IKEKKLINLVVGPDSYR 107
Query: 196 DLPRLLEEVDYGQKG--INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
++P L+ + +KG I+T S ETYADI P R K +TAFV++MRGC+NMC+FC+V
Sbjct: 108 EIPNLINNF-FKKKGEYISTSFSKTETYADIIPKREEK-KITAFVTIMRGCDNMCTFCVV 165
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
PFTRGRE+SR SI+KE L+K+G KE+ LLGQNV+SY G K+ + E
Sbjct: 166 PFTRGREKSRDPYSIIKECKFLFKKGYKEIILLGQNVDSYLWYGGGLKKKFKIKEIKNEE 225
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
N F+ LL+ +++ P MR R+ + +P D D +L +++ N+CK+IH
Sbjct: 226 IIN-----------FSKLLELVAISVPLMRIRFCTSNPNDMSDNVLNVIKKYINICKHIH 274
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G++ +L M R +T E Y+ L+ KI+ IIP+ LS D I GFC E E +H +TL
Sbjct: 275 LPVQSGSNRILSLMNRKHTCEDYILLINKIKNIIPNCSLSCDIITGFCNENENDHNETLN 334
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
LM V Y+ +YMF YS R T+A++ +D+V K+RRLTE+I + + +G
Sbjct: 335 LMNYVKYNFSYMFIYSHRIGTYAYKKLIDNVSLSTKKRRLTEIINLQKTHSYYRNRKYIG 394
Query: 494 TVQLVLVEGPNKK 506
++Q +L+EG + K
Sbjct: 395 SIQDILIEGISTK 407
>gi|21674804|ref|NP_662869.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobium
tepidum TLS]
gi|81790619|sp|Q8KB05.1|MIAB_CHLTE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|21648022|gb|AAM73211.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 444
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 185/460 (40%), Positives = 265/460 (57%), Gaps = 69/460 (15%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPE----NAEVIFINTCAIRDYAEHKVW 134
Y T+GCQMN D EIV ++++ G+ VP NA+++ +N+CA+R+ AE ++
Sbjct: 12 FYIHTFGCQMNQADSEIVTALLRAEGF-----VPSADETNADIVLLNSCAVRENAEERLG 66
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
L + KR K+ V I VLGC+ + ++++ VD + GPD Y
Sbjct: 67 NILMHLKGRKRRCKELV------------IGVLGCVPQFERERVFSDYPFVDFIVGPDNY 114
Query: 195 RDLPRLLEEV----------DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGC 244
R+L L+ + DY Q ETYA I PVR S++AF+ VMRGC
Sbjct: 115 RELAGLVAGLREAVARPALLDYDQT---------ETYAGIEPVR--AGSISAFLPVMRGC 163
Query: 245 NNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVE 304
NN C+FC+VP TRGRERS E +V EV L K G +EVTLLGQNVNS+ D
Sbjct: 164 NNHCAFCVVPVTRGRERSVGFERVVAEVVALEKAGFREVTLLGQNVNSWRDA-------- 215
Query: 305 PGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRD 364
+ GL FA LL+ +SL P MR R+T+ HPKD + L+ ++
Sbjct: 216 ------------------EKGLDFAGLLEGVSLAVPSMRIRFTTSHPKDISEALVKVIAA 257
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
RPN+C +IHLP Q+G+S +L+ M+RG+TRE YLD + IR IP+V +++D I GFC ET
Sbjct: 258 RPNLCNHIHLPVQSGSSRMLDLMKRGHTREEYLDRIAMIRSYIPEVAITTDLIAGFCTET 317
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
E++H +TL+LM+AVGYD A+MF YS+R T A RN DDVP+ VK+ RL E+IE +
Sbjct: 318 EKDHRETLSLMEAVGYDTAFMFHYSVRPGTWAARNLPDDVPDTVKKARLQEIIELQNAIS 377
Query: 485 GQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + ++G VL E +K++ ++ L+G++ V F
Sbjct: 378 REIFQREIGKTVEVLAEAESKRS-ESMLMGRTPENRVVVF 416
>gi|374290272|ref|YP_005037325.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
synthetase [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358377064|gb|AEU09252.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
synthetase [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 463
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 173/438 (39%), Positives = 267/438 (60%), Gaps = 33/438 (7%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
V + Y E+YGCQMN++D EIV SI+ N G+ N+ + A +I +N+C+IR E
Sbjct: 7 VFKKHFFYIESYGCQMNISDNEIVTSILLNNGFFLTENL-KIANIILLNSCSIRTKVELA 65
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
+ RL +LK+E P +LGC++ +K LD + +++ GPD
Sbjct: 66 IKNRLQKLQYLKKE-------------KPILFGILGCLSNSMKKNFLD-NNLINFTIGPD 111
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
Y+ +P ++ G+K + S +ETY +I P R KN +TAF+S+ RGC+NMC+FCI
Sbjct: 112 YYKKIPSIISLSMKGEKISHIFSSKKETYDNIKPFR-KKNKITAFLSITRGCDNMCTFCI 170
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY----NDTSGMEKEVEPGAN 308
VPFTRGRE SR SI+KE L+K+G KEVTLLGQNV+SY ND G++K +
Sbjct: 171 VPFTRGREISRDPYSIIKECKTLYKKGFKEVTLLGQNVDSYVWLGND--GLKKRI----- 223
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ + KK + F+ LLD L++E P MR R+++ +P D ++++ ++ N+
Sbjct: 224 ------YKKIYTEKKKIIDFSKLLDLLAIEIPFMRIRFSTSNPHDMSNKVIEVISKHSNI 277
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
CK+IHLP Q+G+ +L+ M R YTR+ YL L++KI+ IIP+ +S D + GFC E E++H
Sbjct: 278 CKHIHLPVQSGSDKILKLMNRKYTRKQYLSLIKKIKFIIPECSISHDIMTGFCNEDEKDH 337
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+T++LM V Y+ YMF+YS R T+++ ++VPE +K++RL E+I R+ +
Sbjct: 338 QETISLMNEVKYNYGYMFSYSPRPGTYSYNKLENNVPEFIKKKRLQEIINLQRDHSIFQM 397
Query: 489 DSQVGTVQLVLVEGPNKK 506
+G +Q VL+EG +KK
Sbjct: 398 KKYIGKIQEVLIEGESKK 415
>gi|261749500|ref|YP_003257186.1| RNA modification protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497593|gb|ACX84043.1| RNA modification protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 466
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 180/450 (40%), Positives = 272/450 (60%), Gaps = 37/450 (8%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
Y E+YGCQMN++D EI++SI+ G+ N+ + A +I +NTCAIR AE + RL
Sbjct: 16 YIESYGCQMNISDTEIIISILSKNGFLLTNNLKK-AHIILLNTCAIRKKAELSIKNRLEN 74
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
+LK S ++ P +LGC+++ K ++D GP++YR +P
Sbjct: 75 LRYLK-----------SNNQKIPLFGILGCLSKSEK-----YSNLIDFSIGPNSYRKIPD 118
Query: 200 LLEEVDYG-QKGINTLLSLE---ETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
++ V +K I +L E ETY +ISP S +T F+S+ RGC+NMC+FCIVPF
Sbjct: 119 IIRLVMMNDEKKIKPILLSENQNETYENISPSP-SIKKITTFLSITRGCDNMCTFCIVPF 177
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEG 314
TRGRERS SI+KE + L+++G KEVTLLGQNV+SY G++K+++ N
Sbjct: 178 TRGRERSSSPYSIIKECENLYEKGYKEVTLLGQNVDSYLWFGGGLKKQIKIDNN------ 231
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + F+ LLD L+ + P MR R+++ +P D D ++ ++ N+CK+IHL
Sbjct: 232 -------NEKIIDFSRLLDLLASKIPFMRIRFSTSNPHDMSDRVIEVISKHSNICKHIHL 284
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE YL L+QKIR IIP+ +S D I GFC E EE+H +T++L
Sbjct: 285 PVQSGSNKILKLMNRKYTREKYLSLIQKIRSIIPECSISHDIITGFCNEEEEDHLETISL 344
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
M V YD YMF+YS R T+A++ D+VPE +K++RL E+I+ R + +GT
Sbjct: 345 MNKVKYDYGYMFSYSPRAGTYAYKKLKDNVPENIKKKRLKEIIDLQRIHSIFRMKKYLGT 404
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+Q VL+EG +KK + + G++ + V F
Sbjct: 405 IQEVLIEGKSKKN-NQDWYGRNTQNIVVVF 433
>gi|402882757|ref|XP_003904900.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like,
partial [Papio anubis]
Length = 281
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 209/283 (73%), Gaps = 11/283 (3%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q ++Y ETYGCQMNVND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W
Sbjct: 8 QRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWN 66
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
RL+ LK T R +S+ P +I +LGCMAERLK++IL+ +KMVDV+ GPDAYR
Sbjct: 67 RLHQLKALK--------TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDVLAGPDAYR 118
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
DLPRLL + GQ+ N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPF
Sbjct: 119 DLPRLLAIAESGQQAANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPF 178
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSRPV SI++EV +L ++G+KEVTLLGQNVNS+ D S E + + LS GF
Sbjct: 179 TRGRERSRPVASILEEVKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNNAVSTNLSRGF 236
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDEL 358
+ K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+
Sbjct: 237 TTNYKAKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEV 279
>gi|193211917|ref|YP_001997870.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobaculum
parvum NCIB 8327]
gi|229890476|sp|B3QR49.1|MIAB_CHLP8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|193085394|gb|ACF10670.1| RNA modification enzyme, MiaB family [Chlorobaculum parvum NCIB
8327]
Length = 443
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/447 (39%), Positives = 264/447 (59%), Gaps = 43/447 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+ T+GCQMN+ D EIV +I+ G++ + A+++ +NTCA+R A + L+
Sbjct: 5 FFIHTFGCQMNMADTEIVTAILVEGGFAPAED-EGTADMVLLNTCAVRANAVDRAGNVLS 63
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
+ +KR +K + G +LGC+ + ++++ VD + GPD YRDL
Sbjct: 64 HLKGMKRR-RKGLVVG-----------LLGCVPQYEREQLFGDFPFVDFIVGPDNYRDLC 111
Query: 199 RLLEEVDYG-QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
++ V G Q+ +ETYA I P+R N V+ F+ VMRGCNN C+FC+VP TR
Sbjct: 112 GIVRSVREGEQRRAFIDYDQQETYAGIDPIR--ANRVSTFLPVMRGCNNHCAFCVVPVTR 169
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERS + ++ EV L + G +EVTLLGQNVNS+
Sbjct: 170 GRERSVAFDRVIAEVAALEQAGYREVTLLGQNVNSW------------------------ 205
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
C K L FA LL+ +S P MR R+T+ HPKD + L+ ++ +RPN+CK+IHLP Q
Sbjct: 206 -CDADK-SLDFAGLLEGVSHAAPSMRIRFTTSHPKDISESLVRVIGERPNLCKHIHLPVQ 263
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M+RG+TRE YLD + IR+++P V +++D I GFC ETE +H +TL+LM+A
Sbjct: 264 SGSSRMLDLMKRGHTREEYLDKIAMIRELVPGVAITTDLIAGFCTETEVDHRETLSLMEA 323
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD A+MF YS+R T A RN DDVPE VK+ RL E+I+ + + Y ++G V
Sbjct: 324 VGYDTAFMFYYSVRPGTWAARNLPDDVPEAVKKARLQEIIDLQTAMSRELYQREIGKVVE 383
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL E +K++ ++L+G++ V F
Sbjct: 384 VLAEAESKRSA-SQLMGRTSENRAVVF 409
>gi|145219118|ref|YP_001129827.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobium
phaeovibrioides DSM 265]
gi|229890605|sp|A4SCW6.1|MIAB_PROVI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|145205282|gb|ABP36325.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Chlorobium
phaeovibrioides DSM 265]
Length = 448
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 175/452 (38%), Positives = 264/452 (58%), Gaps = 43/452 (9%)
Query: 74 HSQGR-IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
H +GR Y T+GCQMN D I+ +I+ + G+ V E+A+++ +NTCA+R+ A +
Sbjct: 3 HEKGRSFYIHTFGCQMNQADSAIITAILMDGGF-RVAGSQEDADIVILNTCAVRENAVER 61
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
+ +L + KR KK++ G V GC+ + LK ++L+ ++D + GPD
Sbjct: 62 ITHQLQFLRGAKRR-KKSLLVG-----------VAGCVPQHLKREMLEMFPVIDFLAGPD 109
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
YR+LP L+ + + G++ +EETYA I P+R + V AFV V RGCNNMC+FC+
Sbjct: 110 TYRNLPALIGDAEEGKRPAALEFRIEETYAGIDPLR--EVGVGAFVPVTRGCNNMCAFCV 167
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VPFTRGRERS+P +++ EV + ++G E+TLLGQNVNSY D
Sbjct: 168 VPFTRGRERSQPFSAVMDEVRRVVEKGYGEITLLGQNVNSYAD----------------- 210
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ G FA LL +S E P R R+T+ HPKD +L+ + D PN+C ++
Sbjct: 211 ---------PEEGRDFASLLRAVSREAPGCRIRFTTSHPKDISPDLVDAIADSPNICNHV 261
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S +L RM RG+ + YL+ V +R+ IP V L++D I GFCGE +E+H TL
Sbjct: 262 HLPVQSGSSRMLHRMNRGHGIDEYLETVALLRRRIPGVSLTTDLIAGFCGEEDEDHEATL 321
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V YD A+MF YS R T A + D VP VK++RL E+I+ + +C V
Sbjct: 322 ALLREVRYDNAFMFYYSPRFGTAAWKTLADTVPLAVKKQRLQEIIDLQLSISAECLQEAV 381
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G+V VL E ++++ + +L+G++ V F
Sbjct: 382 GSVVDVLAESESRRSTE-QLMGRTGTNRAVVF 412
>gi|302037248|ref|YP_003797570.1| isopentenyl-adenosine A37 tRNA methylthiolase MiaB [Candidatus
Nitrospira defluvii]
gi|300605312|emb|CBK41645.1| Isopentenyl-adenosine A37 tRNA methylthiolase MiaB [Candidatus
Nitrospira defluvii]
Length = 452
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/447 (40%), Positives = 261/447 (58%), Gaps = 51/447 (11%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
++ ET+GCQMN D E+V S+++ AG+ E E A+V+ +NTCAIR+ A +KV+ L
Sbjct: 10 VHIETFGCQMNEYDSELVRSLLRKAGF-EFTEDRERADVMLMNTCAIRENAHNKVYGHLA 68
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
+K + P + VLGCMA+ LK+++ + +VDV+ GPD YR LP
Sbjct: 69 ELKAVK-------------EQRPLVVGVLGCMAQNLKEELTEKQPLVDVLVGPDGYRQLP 115
Query: 199 RLL------EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LL EE ++G+ LS ETY DI P R S A++++MRGC+N CSFC+
Sbjct: 116 GLLTNALNAEEQGLARRGMAVDLSEYETYDDILPER--DCSSNAWIAIMRGCDNFCSFCV 173
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRGRERSR + I++EV+ G ++TLLGQNVNSY +W +
Sbjct: 174 VPYTRGRERSRDPQGILREVEASVATGHTQITLLGQNVNSYR-----------YEDWDFA 222
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
++ +V G+R R R+TSPHPKDFP LL + PN+CK+I
Sbjct: 223 RLILAVAEVP--GVR---------------RVRFTSPHPKDFPAALLDAVAGHPNICKHI 265
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+GN +LE M R Y+R+ YLDL IR+ P + L++D ICGFC ETEEE DT
Sbjct: 266 HLPLQSGNDRILELMNRTYSRKEYLDLAAHIRRRHPGIALTTDIICGFCSETEEEFLDTY 325
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+++ V Y AY+F YS R+ T A R + DDVPE VK R++ L++ R T + +
Sbjct: 326 RVVEEVQYHSAYVFKYSERKNTIAARKFPDDVPEAVKGERVSRLVDLQRPITARLNRELI 385
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRG 519
G V+VEG +K++ D + +G++D G
Sbjct: 386 GQTLPVMVEGDSKRSTD-QWMGRTDTG 411
>gi|78188191|ref|YP_378529.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobium
chlorochromatii CaD3]
gi|123770899|sp|Q3AU39.1|MIAB_CHLCH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|78170390|gb|ABB27486.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Chlorobium
chlorochromatii CaD3]
Length = 449
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/449 (38%), Positives = 253/449 (56%), Gaps = 44/449 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
Y T+GCQMN D I+ +I++N GY N +A ++ +NTCA+R++A +V L
Sbjct: 9 FYIHTFGCQMNQADSGIMTAILQNEGYVAASN-EADAGIVLLNTCAVREHATERVGHLLQ 67
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
+ K+ K + G V GC+ + ++ + +VD + GPD YR LP
Sbjct: 68 HLHGRKKRSKGRLLVG-----------VTGCIPQYEREVLFKNYPVVDFLAGPDTYRSLP 116
Query: 199 RLLEEVDYGQKGIN---TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
L+++V KG + ETY I PVR S S++AFV VMRGCNN C++C+VP
Sbjct: 117 LLIKQVQQAGKGATEAALAFNSAETYDGIEPVRSS--SMSAFVPVMRGCNNHCAYCVVPL 174
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERS P +++ EV +L + G +E+TLLGQNVNSY D P A
Sbjct: 175 TRGRERSHPKAAVLNEVRQLAEAGYREITLLGQNVNSYYD---------PLAQC------ 219
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
FA+LL +S P R R+T+ HPKD + L+ + + N+C +IHLP
Sbjct: 220 -----------NFAELLAAVSCAAPATRIRFTTSHPKDISEALVRTIAEHSNICNHIHLP 268
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+S +L M+RG+T E YL+ + IR +IP+V LS+D I GFCGETE +H TL L+
Sbjct: 269 VQSGSSRILRLMQRGHTIEEYLEKIALIRSLIPNVTLSTDMIAGFCGETEADHQATLRLL 328
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +D A+MF YS R RT A DDVPE +K+ RL E+IE + + VG+V
Sbjct: 329 EEVQFDSAFMFYYSPRPRTPAAEKLTDDVPEALKKARLQEIIECQNRISASLFSQAVGSV 388
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL E ++++ + +L+G++ V F
Sbjct: 389 VEVLAEAESRRSSE-QLMGRTAGNRTVVF 416
>gi|189501144|ref|YP_001960614.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobium
phaeobacteroides BS1]
gi|229890477|sp|B3ENP4.1|MIAB_CHLPB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|189496585|gb|ACE05133.1| RNA modification enzyme, MiaB family [Chlorobium phaeobacteroides
BS1]
Length = 447
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 268/455 (58%), Gaps = 42/455 (9%)
Query: 70 GSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYA 129
G+ + ++Y T+GCQMN D EI+ +++++ GY + E A+++ +NTCA+R+ A
Sbjct: 7 GNVLQMTKKVYIRTFGCQMNQADTEIITALLQDEGYV-MTGSEERADLVILNTCAVRENA 65
Query: 130 EHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVC 189
K+ L++ G+ +S+ + V+GC+ + ++K+ +D +
Sbjct: 66 VEKILHTLDHM------------KGKRRSRPGLLVGVIGCVPQYYREKMFGMADGIDFLA 113
Query: 190 GPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
GPD YR LP ++ G +G + S +ETY I P R +++AF+ VMRGCNN C+
Sbjct: 114 GPDTYRQLPAMIANAGQGIRGADFGFSSDETYCGIEPAR--SGTISAFIPVMRGCNNRCA 171
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
FC+VPFTRG+ERSRP S++++V L G KE+TLLGQNVNSY+D
Sbjct: 172 FCVVPFTRGKERSRPFRSVLEDVGRLAASGYKEITLLGQNVNSYSDD------------- 218
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
+ C F +LLDR+++ +R R+T+ HPKD + L+ ++ R N+C
Sbjct: 219 ------EAACD-------FTELLDRVAVAAEGVRIRFTTSHPKDISESLVRVIAARNNIC 265
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
IHLP Q+G++ +L+ M RG+TRE Y + + IR IP V +S+D I GFCGET E+H
Sbjct: 266 NAIHLPVQSGSTRMLKLMNRGHTREEYFEKIAMIRSAIPGVTVSTDLIAGFCGETLEDHQ 325
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
TL++M+ V +D AYMF YS+R T+A ++ DDVPEE K+RRL E+I +G+
Sbjct: 326 ATLSMMEDVRFDFAYMFYYSVRPGTYAAKHLPDDVPEEEKKRRLEEIIALQGSISGERNA 385
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++VG V VL E +K++ + L+G++D V F
Sbjct: 386 AEVGAVVEVLAESESKRSSEM-LMGRTDTNRVVVF 419
>gi|449533478|ref|XP_004173701.1| PREDICTED: CDK5RAP1-like protein-like, partial [Cucumis sativus]
Length = 288
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 160/229 (69%), Positives = 181/229 (79%), Gaps = 17/229 (7%)
Query: 21 SLNLSRNFSHSSLDLPDGPGLHHFIAQSSLTAS-QPLADLAPA--SEVSSATG------- 70
++ LS +FS S+ G FIA ++ + S Q +L P+ SE S G
Sbjct: 65 AIPLSGSFSRSTRRFRGG-----FIAAATASGSVQRSEELRPSISSEQSWVLGQNGTESL 119
Query: 71 --SEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDY 128
S+V GR+Y ETYGCQMN+NDME+VLSIMK AGYSE ++ PE AE+IFINTCAIRD
Sbjct: 120 PASDVPLSGRVYHETYGCQMNINDMEVVLSIMKKAGYSETVDTPETAEIIFINTCAIRDN 179
Query: 129 AEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVV 188
AE KVWQRLNYFWFLKR WK NVATGRSQS+HPPK+VVLGCMAERLKDKILD+DKMVDVV
Sbjct: 180 AEQKVWQRLNYFWFLKRNWKSNVATGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVV 239
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAF 237
CGPDAYRDLPRLL+EVDYGQKGINTLLSLEETYADISPVRI+KNSVTAF
Sbjct: 240 CGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAF 288
>gi|78186125|ref|YP_374168.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobium
luteolum DSM 273]
gi|123743738|sp|Q3B6A6.1|MIAB_PELLD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|78166027|gb|ABB23125.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Chlorobium luteolum DSM
273]
Length = 446
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 259/447 (57%), Gaps = 42/447 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R Y +T+GCQMN D I+ ++ +AG+ + ++A+V+ +NTCA+R+ A K+ L
Sbjct: 6 RFYIQTFGCQMNEADSGIIARVLLDAGFRRA-DTEQDADVVLLNTCAVRENAVEKIAHLL 64
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ K+ +K + G VLGC+ + ++++ +D + GPD+YR L
Sbjct: 65 EHLKGAKKR-RKTLQVG-----------VLGCVPQHQREEMFSRFPAIDFIAGPDSYRRL 112
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+++ + ETY I VR + ++AF+ VMRGCNNMC+FC+VPFTR
Sbjct: 113 PSLIDDAASAVRSAMLDFDPSETYVGIRQVR--EGRISAFIPVMRGCNNMCAFCVVPFTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERS+P+ + E EL + G +E+TLLGQNVNSY+D +
Sbjct: 171 GRERSQPLAMVTGEARELAEAGYREITLLGQNVNSYSDPAS------------------- 211
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
G F+ LLD ++L P++R R+T+ HPKD L+ + RPN+C+++HLP Q
Sbjct: 212 -------GATFSALLDAVALAAPDVRIRFTTSHPKDISVGLIDTIARRPNICRHVHLPVQ 264
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +VL RM RG+ YL+ ++ IR +P V LS+D I GFCGE EE+H TL L++
Sbjct: 265 SGSDSVLRRMNRGHGISEYLEKIRIIRDALPGVTLSTDIIAGFCGEREEDHRATLDLLRT 324
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D A+MF YS RE T A R DDV E K+RRL E+I+ +E + + QVGTV
Sbjct: 325 VRFDAAFMFHYSTREGTLAARTLPDDVAETDKKRRLQEIIDLQQEISAENNRRQVGTVAE 384
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL E ++++P L+G++D V F
Sbjct: 385 VLAESESRRSPG-RLLGRTDGNRAVVF 410
>gi|189347647|ref|YP_001944176.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobium
limicola DSM 245]
gi|229890475|sp|B3EGT4.1|MIAB_CHLL2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|189341794|gb|ACD91197.1| RNA modification enzyme, MiaB family [Chlorobium limicola DSM 245]
Length = 442
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/448 (38%), Positives = 258/448 (57%), Gaps = 45/448 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y T+GCQMN D I+ ++++ GY + + E A +I +NTCA+R+ A ++ L
Sbjct: 7 KFYIHTFGCQMNQADSGIIAALLEQDGYQQA-SSEEEAGIIMLNTCAVRENAVERIAHYL 65
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ KR K P +V L GC+ + ++++ ++D + GPD YR
Sbjct: 66 QHVKGFKR-------------KCPELLVGLTGCIPQYRREELFTVFPVIDFLAGPDTYRV 112
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+ E G + + ETY ++ R S+TAFV +MRGCNNMC+FC+VPFT
Sbjct: 113 LPVLIAEAGKG-RAARLDFNPFETYDGVTQAR--TQSLTAFVPIMRGCNNMCAFCVVPFT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P S++ EV L + G +E+TLLGQNVNSY+D+
Sbjct: 170 RGRERSHPFGSVLDEVRALAESGCREITLLGQNVNSYHDS-------------------- 209
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ G F+ LLD +S E PE R R+T+ HPKD L+ M RPN+C ++HLP
Sbjct: 210 ------QSGADFSRLLDAVSREAPETRIRFTTSHPKDMSHSLVETMASRPNICNHLHLPV 263
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L RM RG+ E Y + ++ +R+ IP + LS+D I GFCGE++ +H TL LM+
Sbjct: 264 QSGSTRMLARMNRGHDIEDYRNKIELLRERIPGISLSTDLIAGFCGESDADHCQTLELMR 323
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D A+MF YS+R T A R DDVPEEVK++RL E+I+ + + +G+V
Sbjct: 324 EVRFDSAFMFYYSVRPGTLAARTMPDDVPEEVKKQRLQEIIDLQNGISAELLRLAIGSVV 383
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE ++++ D +L+G++ V F
Sbjct: 384 EVLVESESRRSSD-QLMGRTGGNRVVVF 410
>gi|110598152|ref|ZP_01386430.1| tRNA-i(6)A37 modification enzyme MiaB [Chlorobium ferrooxidans DSM
13031]
gi|110340284|gb|EAT58781.1| tRNA-i(6)A37 modification enzyme MiaB [Chlorobium ferrooxidans DSM
13031]
Length = 428
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 253/441 (57%), Gaps = 50/441 (11%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAE----VIFINTCAIRDYAEHKVWQRLNYFWFL 143
MN D I+ +++ GY VP +E +I +NTCA+R+ A ++ L + +
Sbjct: 1 MNQADSAIMAALLVEDGY-----VPAESEGEAGIILLNTCAVRENAVERIEHYLQHLLGM 55
Query: 144 KREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEE 203
KR+ K + + V GC+ + ++++ +D + GPD YR LP L+ +
Sbjct: 56 KRKQKDLI------------LGVAGCIPQYQREEMFSMSPAIDFLAGPDTYRSLPLLISQ 103
Query: 204 VDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSR 263
G++ + + ETYA I P R + +TAFV VMRGCNNMC++C+VPFTRGRERS
Sbjct: 104 ARSGKRAASLEFNPAETYAGIDPRR--QGLITAFVPVMRGCNNMCAYCVVPFTRGRERSH 161
Query: 264 PVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKK 323
+ S++ EV ++ G +E+TLLGQNVNSY S +++++
Sbjct: 162 TMSSVLDEVRKVAASGYREITLLGQNVNSY---SAPDRDMD------------------- 199
Query: 324 MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAV 383
FA LL+ +S + PE+R R+T+ HPKD + L+ + RPN+C +IHLP Q+G+S V
Sbjct: 200 ----FAGLLEAVSRQAPELRIRFTTSHPKDISESLVRTIARRPNICNHIHLPVQSGSSRV 255
Query: 384 LERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMA 443
L M RG+T E Y + + IR +IPDV LS+D I GFCGE E +H TL L+ + +D A
Sbjct: 256 LGLMNRGHTIEQYREKIALIRSVIPDVSLSTDLIAGFCGEDEADHQLTLKLLSDIRFDAA 315
Query: 444 YMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGP 503
YMF YS R T A R DDVPE VK+RRL E+I+ + +GQ +G+V VL E
Sbjct: 316 YMFFYSTRPGTLAARTLEDDVPEAVKKRRLQEIIDLQNDISGQLLQQSIGSVVEVLAESE 375
Query: 504 NKKAPDTELVGKSDRGHRVAF 524
++++ +L+G++D V F
Sbjct: 376 SRRSA-AQLMGRTDTNRAVVF 395
>gi|94502388|ref|ZP_01308846.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Sulcia
muelleri str. Hc (Homalodisca coagulata)]
gi|94451055|gb|EAT14022.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Sulcia
muelleri str. Hc (Homalodisca coagulata)]
Length = 438
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 257/420 (61%), Gaps = 30/420 (7%)
Query: 89 NVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWK 148
N++D EIV SI+ N G+ + N+ E A +I INTC+IRD +E K+ R+N F+ K
Sbjct: 1 NISDSEIVSSILNNKGFIKTENLKE-ANIILINTCSIRDKSEKKILLRINQIKFI---IK 56
Query: 149 KNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQ 208
KN + I +LGCMA + K+ + K++++V GPD+YR++P L+ + +
Sbjct: 57 KN---------NDILIGILGCMAYKFKN--IKEKKLINLVVGPDSYREIPNLINNF-FKK 104
Query: 209 KG--INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVE 266
KG I+T S ETYADI P R K +TAFV++MRGC+NMC+FC+VPFTRGRE+SR
Sbjct: 105 KGEYISTSFSKTETYADIIPKREEK-KITAFVTIMRGCDNMCTFCVVPFTRGREKSRDPY 163
Query: 267 SIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGL 326
SI+KE L+K+G KE+ LLGQNV+SY G K+ + E N
Sbjct: 164 SIIKECKFLFKKGYKEIILLGQNVDSYLWYGGGLKKKFKIKEIKNEEIIN---------- 213
Query: 327 RFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLER 386
F+ LL+ +++ P MR R+ + +P D D +L +++ N+CK+IHLP Q+G++ +L
Sbjct: 214 -FSKLLELVAISVPLMRIRFCTSNPNDMSDNVLNVIKKYINICKHIHLPVQSGSNRILSL 272
Query: 387 MRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMF 446
M R +T E Y+ L+ KI+ IIP+ LS D I GFC E E +H +TL LM V Y+ +YMF
Sbjct: 273 MNRKHTCEDYILLINKIKNIIPNCSLSCDIITGFCNENENDHNETLNLMNYVKYNFSYMF 332
Query: 447 AYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKK 506
YS R T+A++ +D+V K+RRLTE+I + + +G++Q +L+EG + K
Sbjct: 333 IYSHRIGTYAYKKLIDNVSLSTKKRRLTEIINLQKTHSYYRNRKYIGSIQDILIEGISTK 392
>gi|387907186|ref|YP_006337522.1| MiaB family RNA modification protein [Blattabacterium sp. (Blaberus
giganteus)]
gi|387582079|gb|AFJ90857.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
synthetase [Blattabacterium sp. (Blaberus giganteus)]
Length = 444
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 168/427 (39%), Positives = 257/427 (60%), Gaps = 37/427 (8%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
Y E YGCQMN++D I+ SI+ G+ N+ + A +I +N C+IR+ AE + +RL
Sbjct: 9 YIENYGCQMNISDSNIITSILLKNGFFLSENLKK-ANIILLNACSIREKAELTLKKRLE- 66
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
+ KK + G ++GC ++++K+ +L +KM D PD+YR++P
Sbjct: 67 -QLKFLKKKKKICVG-----------IIGCFSKQIKNFLLQ-EKMADFFVNPDSYREIPN 113
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+ G++ + + ETYADIS ++ +K +T F+S+ GCNNMC+FCIVPFTRGR
Sbjct: 114 FIYYSTIGKQYFH-VAKKNETYADISSIQNNK-KITTFLSITIGCNNMCTFCIVPFTRGR 171
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR SI+KE L+K G KE+TLLGQNV+SY ++
Sbjct: 172 ERSRDPYSIIKECKRLYKNGYKEITLLGQNVDSYLWIDTIQN------------------ 213
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
KK + F+ LD L+ E P MR R+++ +P D +++L ++ N+CK+IHLP Q+G
Sbjct: 214 --KKNIVNFSKFLDLLAKEIPYMRIRFSTSNPHDMSNQVLKVISKHKNICKHIHLPVQSG 271
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L+ M R YTRE YL LV++IR IIP+ +S D I GFC E E +H DT++LM +
Sbjct: 272 SNKILKLMNRKYTREKYLFLVKQIRNIIPECSISHDIITGFCNENERDHQDTISLMNEIK 331
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
Y+ YMF+YS R T+A+R DDVP+++K+RRL E+I+ + + +G ++ VL
Sbjct: 332 YNYGYMFSYSPRPGTYAYRKLKDDVPKDIKKRRLKEIIDLQIKHSFYRMQEHLGNIEEVL 391
Query: 500 VEGPNKK 506
+EG +KK
Sbjct: 392 IEGESKK 398
>gi|444335493|ref|YP_007391862.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
synthetase [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
gi|444299872|gb|AGD98109.1| MiaB family tRNA modification enzyme: 2-methylthioadenine
synthetase [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
Length = 467
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 269/450 (59%), Gaps = 36/450 (8%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
Y E+YGC MN +D EI++SI+ G+ N+ + A +I +NTCAIR AE + +RL+
Sbjct: 16 YIESYGCHMNTSDTEIIISILSKNGFLLTNNLKK-AHIILLNTCAIRKKAELSIEKRLDN 74
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
+LK S ++ P +LGC+++ K ++D GP++YR +P
Sbjct: 75 LRYLK-----------SNNQKIPLFGILGCLSKSEK-----YSNLIDFSIGPNSYRKIPD 118
Query: 200 LLEEVDYG-QKGINT---LLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
++ V +K I L ++ + I +K +T F+S+ RGC+NMC+FCIVPF
Sbjct: 119 IIRLVMMNDEKKIKIHFYYLIIKMKHMKILVPIHNKKKITTFLSITRGCDNMCTFCIVPF 178
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEG 314
TRGRERS SI+KE + L+++G KEVTLLGQNV+SY G++K+++
Sbjct: 179 TRGRERSSSPYSIIKECENLYEKGYKEVTLLGQNVDSYLWFGGGLKKKIKID-------- 230
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
NS K+ + F+ LLD L+ + P MR R+++ +P D D ++ ++ N+CK+IHL
Sbjct: 231 -NSNEKI----IDFSRLLDLLASKIPFMRIRFSTSNPHDMSDRVIEVISKHSNICKHIHL 285
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YT E YL L+QKIR I+P+ +S D I GFC E EE+H +T++L
Sbjct: 286 PVQSGSNKILKLMNRKYTIEKYLSLIQKIRSIVPECSISHDIITGFCNEEEEDHLETISL 345
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
M V YD YMF+YS R T+A++ D+VPE VK+RRL E+I+ R + +GT
Sbjct: 346 MNKVKYDYGYMFSYSPRPGTYAYKKLKDNVPENVKKRRLKEIIDLQRIHSIFRMKKYLGT 405
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+Q VL+EG +KK + + G++ + V F
Sbjct: 406 IQEVLIEGKSKKN-NQDWYGRNTQNIVVVF 434
>gi|119358129|ref|YP_912773.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chlorobium
phaeobacteroides DSM 266]
gi|229890478|sp|A1BIX2.1|MIAB_CHLPD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|119355478|gb|ABL66349.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Chlorobium
phaeobacteroides DSM 266]
Length = 442
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 172/448 (38%), Positives = 255/448 (56%), Gaps = 45/448 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y T+GCQMN D I+ ++++ GY + + E A +I +NTCA+R+ A ++ L
Sbjct: 7 KFYIHTFGCQMNQADSGIITALLEKEGYQQAAS-EEEAGIIMLNTCAVRENAVERISHYL 65
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ KR K P IV L GC+ + ++++ ++D + GPD YR
Sbjct: 66 QHVKGFKR-------------KCPELIVGLTGCIPQYRREELFTVFPVIDFLAGPDTYRV 112
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+ E + + ETY + R S+ AFV ++RGCNNMC+FC+VPFT
Sbjct: 113 LPALIAEAG-DSRSARLEFNAFETYDGVRQAR--TQSLNAFVPIIRGCNNMCAFCVVPFT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P ES++ EV L +G +E+TLLGQNVNSY+D +
Sbjct: 170 RGRERSHPFESVLDEVRALADDGCREITLLGQNVNSYHDPAS------------------ 211
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
G F+ LLD +S E PE R R+T+ HPKD L+ M RPN+C ++HLP
Sbjct: 212 --------GADFSRLLDAVSREAPETRIRFTTSHPKDMSHSLVETMALRPNICNHLHLPV 263
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L RM RG+ E Y + ++ +R+ IP + LS+D I GFCGE+E +H TL LM+
Sbjct: 264 QSGSTRMLARMNRGHDIEEYRNKIELLRKWIPGISLSTDLIAGFCGESEADHDQTLELMR 323
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +MF YS+R+ T A R DDVPEEVK++RL E+I+ + + G+V
Sbjct: 324 EVRFDSVFMFYYSVRQGTLAARTMPDDVPEEVKKQRLQEIIDLQNGISAELLGLAPGSVV 383
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE ++++ D +L+G++D V F
Sbjct: 384 EVLVESESRRSSD-QLMGRTDGNRVVVF 410
>gi|392404344|ref|YP_006440956.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Turneriella parva DSM
21527]
gi|390612298|gb|AFM13450.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Turneriella parva DSM
21527]
Length = 473
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 253/454 (55%), Gaps = 54/454 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y ETYGCQMN D + I+++ P A++I +NTCAIR+ A KV+ RL
Sbjct: 34 QFYIETYGCQMNEYDSLLAGKILESNATQTA--SPAEADIILLNTCAIRENAHQKVYNRL 91
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
RE + G K+ +LGCMA+ L++ +L + VD + GPDA R+L
Sbjct: 92 -------RELSRFHKAG-------AKVGILGCMAQNLREDLLYENLPVDFIMGPDALRNL 137
Query: 198 PRLLEE--VDYGQKGINTLLSLEETYADISP-----VRISKNSVTAFVSVMRGCNNMCSF 250
+L++ D G+ +N LS ETY DI P +R + +TA V++ RGC+N C+F
Sbjct: 138 AQLVDSPTADTGRSFLN--LSRIETYDDIVPTFEHHMRYRDSKITASVTIQRGCDNFCAF 195
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
C+VP+TRGRERSRP++SIV EV L + GVK V LLGQNVNSY+
Sbjct: 196 CVVPYTRGRERSRPIDSIVAEVQALAESGVKTVILLGQNVNSYHHEKA------------ 243
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
RF DL++ L R ++SPHPKDFP EL+ +M P C
Sbjct: 244 ----------------RFIDLIEALLARTTIARIYFSSPHPKDFPVELIDLMAAEPRFCN 287
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+H+P Q G + L RM+R YTRE +L++V+++R + DV +S+D I GF GE++ + +
Sbjct: 288 QVHMPLQAGANNTLRRMKRNYTREEFLEIVERVRARVHDVAISTDVIAGFPGESDADFEE 347
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL +M+ +D A+MFAYS R+ T A R Y DDVPE VK+ RL +I+ + +
Sbjct: 348 TLEMMRLADFDSAFMFAYSERKGTIAQRLYPDDVPEAVKKERLARMIDLQLKRSHTNNLR 407
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VG V + E P+++ ++ + + G +V F
Sbjct: 408 YVGQVVEAMAEQPSRRDA-SDWIARMSNGRKVVF 440
>gi|156339127|ref|XP_001620089.1| hypothetical protein NEMVEDRAFT_v1g149213 [Nematostella vectensis]
gi|156204445|gb|EDO27989.1| predicted protein [Nematostella vectensis]
Length = 323
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/320 (45%), Positives = 217/320 (67%), Gaps = 25/320 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGCQMN+ND EIV SI+ G++ ++ E+A+++ +NTC+IR+ AE + +RL
Sbjct: 28 KLFIESYGCQMNMNDSEIVASILAQQGFNTTQHL-EDADLVLVNTCSIREKAEQTIRKRL 86
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +K KKN K+ VLGCMAERLK+K L+ +K+VD+V GPDAYRDL
Sbjct: 87 QKYNAVK---KKNTKM---------KVGVLGCMAERLKEKFLEEEKIVDLVVGPDAYRDL 134
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL+E+D G+ +N +LS +ETY D++PVR++ N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 135 PNLLQEIDEGRDAVNVILSKDETYGDVAPVRLNNNGVSAFVSITRGCDNMCTFCVVPFTR 194
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI++E+ + + KE+TLLGQNV+SY G L + F
Sbjct: 195 GRERSRDPQSILEEIQSMADQNFKEITLLGQNVDSYLWYGG-----------GLKKDFKK 243
Query: 318 MCKV-KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
++ + + FA LLD + FP+MRFR+++ +P+D ++++ M N+CKYIHLP
Sbjct: 244 ATEIAQATAVDFAQLLDMAATRFPKMRFRFSTSNPQDMSLDVIHTMAKHKNICKYIHLPV 303
Query: 377 QTGNSAVLERMRRGYTREAY 396
Q+G++ +L+ M R +TRE Y
Sbjct: 304 QSGSNKMLKAMNRQHTREEY 323
>gi|302338928|ref|YP_003804134.1| tRNA-i(6)A37 thiotransferase protein MiaB [Spirochaeta smaragdinae
DSM 11293]
gi|301636113|gb|ADK81540.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Spirochaeta smaragdinae
DSM 11293]
Length = 440
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/453 (37%), Positives = 255/453 (56%), Gaps = 52/453 (11%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
GR + ETYGCQMN+ + + ++ G+S PE A+++ +NTCA+R AE ++W R
Sbjct: 3 GRFFLETYGCQMNIAESNAMTLQLEALGWSAA-ERPEEADIVLLNTCAVRQTAEDRIWGR 61
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ Y+ FLK ++V GCMAERL ++I+ K VD V G R
Sbjct: 62 IGYYKFLK-------------ESRDFTLIVTGCMAERLGEEIIKESKAVDYVLGTFQKRK 108
Query: 197 LPRLLEEVDYGQKGINTLLSLEET----YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
L E+ G + + ++ + P ++K + AF+ +M GCNN CS+CI
Sbjct: 109 L----SEIACGHGETHAPVKADDLSVSPHFQFEPYHLAKGAFKAFLPIMHGCNNFCSYCI 164
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+ RGRE SR E I +E++ L ++GV+E+TLLGQNVNSYN W +
Sbjct: 165 VPYVRGREISRSPEDIFREIERLEEKGVREITLLGQNVNSYN--------------WNDT 210
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRF-RYTSPHPKDFPDELLYIMRDRPNVCKY 371
LRF DLL +++ +R+ R+ S HPKD P EL+ ++ + VC +
Sbjct: 211 -------------LRFPDLLAKIASMTDSIRWIRFMSSHPKDIPQELIRVIAEHETVCNH 257
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLP Q G+++VL RM R YTRE Y DLV+ +R +IP + LS+D + GF GE+EE+ T
Sbjct: 258 IHLPVQHGSNSVLRRMNRKYTREHYFDLVEMMRSVIPGLSLSTDLMIGFPGESEEDFELT 317
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L++ VG+D A+ + Y+ RE T A+ + + VP EVK RL LIE RE + ++
Sbjct: 318 LDLVRQVGFDDAFTYYYNPREGTAAY-DMAEQVPHEVKLDRLKTLIELQREISFARRKAR 376
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G + VLVE KK + EL+ +++R VAF
Sbjct: 377 IGDSERVLVEQRAKKR-EGELLARTNRNEMVAF 408
>gi|170759550|ref|YP_001787122.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum A3 str. Loch Maree]
gi|229890489|sp|B1KSA4.1|MIAB_CLOBM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|169406539|gb|ACA54950.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A3
str. Loch Maree]
Length = 450
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 260/456 (57%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
++++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINAIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV I + E++ + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSILKIQEKEDSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEDEIKKLISEGYKEITLLGQNVNSYG------KDLEPK-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FADLL+R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFADLLERVNTIDGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVVNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>gi|298712341|emb|CBJ33133.1| n/a [Ectocarpus siliculosus]
Length = 442
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/301 (51%), Positives = 203/301 (67%), Gaps = 19/301 (6%)
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+ G + ETYGCQMNV+D E+V +I+ AG+SE + E A V+ NTCAIR+ AE KV
Sbjct: 145 RTAGSFFIETYGCQMNVSDTEVVRAILLKAGFSEADTL-EEAGVVLANTCAIRERAEGKV 203
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPP-------KIVVLGCMAERLKDKILDADKMVD 186
W RL +F ++R +K AT ++++ P KI VLGCMAERLK+ +L+ VD
Sbjct: 204 WDRLKFFSSIRRR-RKLAATHAAKARQPVPGGLSDLKIGVLGCMAERLKESLLERGG-VD 261
Query: 187 VVCGPDAYRDLPRLLEEVDYGQKG-----INTLLSLEETYADISPVRISKNS---VTAFV 238
+V GPDAYRDLPRLLE V G +N LS +ETYADI+PVR+ N+ V+AF+
Sbjct: 262 LVTGPDAYRDLPRLLELVGTSGSGESTGAVNVQLSQDETYADIAPVRLVNNTSEAVSAFI 321
Query: 239 SVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG 298
S+MRGCNNMC++CIVPFTRGRERSRP+ SIV E L +GV+EVTLLGQNVNSY+D S
Sbjct: 322 SIMRGCNNMCTYCIVPFTRGRERSRPLGSIVDEAMRLRDDGVREVTLLGQNVNSYHDRSE 381
Query: 299 MEKEVEPGANWRLSEGFNSMCKVK-KMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDE 357
+ G ++ + GF + + + G FA+LL ++ PE+R R+TSPHPKDFPDE
Sbjct: 382 ASTALYNGTDYTTTAGFGNTFRSRGGAGAYFAELLAEVASAVPEVRVRFTSPHPKDFPDE 441
Query: 358 L 358
+
Sbjct: 442 V 442
>gi|456890851|gb|EMG01635.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Leptospira borgpetersenii
str. 200701203]
Length = 359
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 221/356 (62%), Gaps = 32/356 (8%)
Query: 170 MAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVR 228
MA+ L D + + +D+V GPD YR LP L++ + G+ I+ T LS ETY +I P
Sbjct: 1 MAQNLGDDLFHQELPLDLVVGPDNYRSLPELIQRIRSGEHSISLTRLSKIETYDEIEPRV 60
Query: 229 ISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQ 288
+ N + AFV++MRGCNN C+FC+VP+TRGRERSR +SIV+E+ +L ++G++++TLLGQ
Sbjct: 61 V--NGIQAFVTIMRGCNNFCTFCVVPYTRGRERSRDPKSIVREIQDLTEKGIRQITLLGQ 118
Query: 289 NVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTS 348
NVNSY K+ G FA L+ L E R R+TS
Sbjct: 119 NVNSY----------------------------KEQGTDFAGLIQMLLDETTIERIRFTS 150
Query: 349 PHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIP 408
PHPKDFP LL +M P C IHLP Q GN+ VLE M+R Y++E +LD+V++IR I+P
Sbjct: 151 PHPKDFPVRLLRLMAQNPRFCPNIHLPLQAGNTRVLEEMKRSYSKEEFLDVVREIRNIVP 210
Query: 409 DVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEV 468
DVG+++D I GF ETEEE DTL +++ V +DMA+MF YS RE T A + D+VPEE
Sbjct: 211 DVGITTDIIVGFPNETEEEFEDTLAVVREVQFDMAFMFKYSEREGTMARKKLPDNVPEET 270
Query: 469 KQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
K RLT+L++ + + +++G V +L+E ++K+ + +L G++ G F
Sbjct: 271 KSARLTKLVDLQTSISHEQNRARIGRVYSILIENTSRKS-EKQLCGRTPCGRMTVF 325
>gi|170755938|ref|YP_001781349.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum B1 str. Okra]
gi|429246333|ref|ZP_19209663.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum CFSAN001628]
gi|229890487|sp|B1IM69.1|MIAB_CLOBK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|169121150|gb|ACA44986.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum B1
str. Okra]
gi|428756643|gb|EKX79185.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum CFSAN001628]
Length = 450
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 260/456 (57%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
++++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINAIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV + + E++ + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSVLKIQEKEDSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEDEIKKLISEGYKEITLLGQNVNSYG------KDLEPK-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL+R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLERVNTIDGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVVNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>gi|381210061|ref|ZP_09917132.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Lentibacillus
sp. Grbi]
Length = 526
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 178/454 (39%), Positives = 267/454 (58%), Gaps = 46/454 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + TYGCQMN +D E++ I+ GY E N ++A++I +NTCAIR+ AE+KV
Sbjct: 80 GKGRKFMIRTYGCQMNEHDTEVMAGILNEMGY-ESTNDTKDADIILLNTCAIRENAENKV 138
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ + + LKRE K ++ G V GCM+ E++ ++I+ VD++ G
Sbjct: 139 FGEIGHLKALKRE-KPDLILG-----------VCGCMSQEEKVVNRIMKKHPQVDLIFGT 186
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP L++E +G++ + + S E + P + K V A+V++M GC+ C++C
Sbjct: 187 HNIHRLPHLVKEAMFGKEKVVEVWSKEGDIIENLP-KARKGKVKAWVNIMYGCDKFCTYC 245
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVP TRG+ERSR E I++EV L +G KE+TLLGQNVN+Y G ++
Sbjct: 246 IVPMTRGKERSRLPEDIIQEVRHLTAQGYKEITLLGQNVNAY------------GKDFED 293
Query: 312 SEGFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
S+ GL DL+D L ++ P R R+T+ HP+DF D L+ ++ N+
Sbjct: 294 SD----------YGL--GDLMDDLHKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLLD 339
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+G+S VL++M R YTRE YL+LV+KIR+ +P+ L++D I GF ETEE+ +
Sbjct: 340 HIHLPVQSGSSEVLKKMNRRYTREEYLELVRKIREAMPNATLTTDIIVGFPNETEEQFEE 399
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
T++L++ VG++ A+ F YS RE T A R DDVPEEVK++RL L E + + +
Sbjct: 400 TMSLVEEVGFESAFTFIYSPREGTPAARKQ-DDVPEEVKKQRLYRLNELVNKQSAESMQH 458
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +KK PD L G ++R V F
Sbjct: 459 YKDKVVKVLVEGESKKDPDV-LAGYTERNKLVNF 491
>gi|153941109|ref|YP_001391056.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum F str. Langeland]
gi|384462089|ref|YP_005674684.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum F
str. 230613]
gi|229890488|sp|A7GE46.1|MIAB_CLOBL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|152937005|gb|ABS42503.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum F
str. Langeland]
gi|295319106|gb|ADF99483.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum F
str. 230613]
Length = 450
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 259/456 (56%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
++++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINTIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV + + E++ + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSVLKIQEKEDSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEAEIKKLISEGYKEITLLGQNVNSYG------KDLEPN-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVVNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>gi|365154971|ref|ZP_09351367.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
smithii 7_3_47FAA]
gi|363628896|gb|EHL79597.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
smithii 7_3_47FAA]
Length = 514
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 178/451 (39%), Positives = 262/451 (58%), Gaps = 47/451 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I+ GY E + PE+A VI +NTCAIR+ AE+KV+ +
Sbjct: 70 KFYIRTYGCQMNEHDTEVMAGILMQLGY-EPTDQPEDANVILLNTCAIRENAENKVFGEI 128
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK E K ++ G V GCM+ E + +K+L + VD+V G
Sbjct: 129 GHLKPLKME-KPDLLLG-----------VCGCMSQEESVVNKLLKQYQYVDMVFGTHNIH 176
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L E ++ + + S E + P ++ + + A+V++M GC+ C++CIVP+
Sbjct: 177 RLPHILNEAYMAKEMVVEVWSKEGDVVENLP-KVRQGKIKAWVNIMYGCDKFCTYCIVPY 235
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY-NDTSGMEKEVEPGANWRLSEG 314
TRG+ERSR E I++EV +L +G KE+TLLGQNVN+Y D + ME
Sbjct: 236 TRGKERSRRPEDIIQEVRQLAAQGYKEITLLGQNVNAYGKDFTDME-------------- 281
Query: 315 FNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
GL DL+D L ++ P R R+T+ HP+DF D L+ ++ + N+ ++IH
Sbjct: 282 ---------YGL--GDLMDDLRKIDIP--RIRFTTSHPRDFDDHLIEVLAKKGNLMEHIH 328
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G+S +L+ M R YTRE YL+LV+KI++ IPDV L++D I GF ETEE+ +TL+
Sbjct: 329 LPVQSGSSEILKIMARKYTREQYLELVRKIKKAIPDVALTTDIIVGFPNETEEQFEETLS 388
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L++ VG++ AY F YS RE T A + D+VP EVK+ RL L E E + + G
Sbjct: 389 LVREVGFESAYTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNELVNELSAKAMKKYEG 447
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +K PD L G + R V F
Sbjct: 448 KIVEVLVEGESKNNPDV-LAGYTRRNKLVNF 477
>gi|169830740|ref|YP_001716722.1| RNA modification protein [Candidatus Desulforudis audaxviator
MP104C]
gi|229890512|sp|B1I241.1|MIAB_DESAP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|169637584|gb|ACA59090.1| RNA modification enzyme, MiaB family [Candidatus Desulforudis
audaxviator MP104C]
Length = 443
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 253/448 (56%), Gaps = 43/448 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
++ T+GCQMN D E++ +++ GY ++ E A+++ INTC +R+ AE++VW L
Sbjct: 8 VHTITFGCQMNEFDSELMTGLLEGMGYEPAKSLRE-ADLVLINTCCVRESAENRVWGLLG 66
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRD 196
KR+ + + + V GC+ E ++I+ +VD+V G +
Sbjct: 67 SLKRYKRDKPELI------------VAVSGCLPQQEGTAEEIIRRFPVVDLVLGTHNRHE 114
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+EEV G++ + + + + PVR K+ + A+V V+ GCNN C++C+VP+
Sbjct: 115 LPGLIEEVRAGRRPVLGVRQPDSAVPEGLPVR-RKSGLRAWVPVIHGCNNFCTYCVVPYV 173
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE SR +++V EV L G +EVTLLGQNVNSY G
Sbjct: 174 RGRECSRRPDAVVDEVCGLAAAGYREVTLLGQNVNSYGRDLGE----------------- 216
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
G+ FA LL RL R R+T+ HP+DF D L+ ++ VC++IHLPA
Sbjct: 217 --------GIDFAALLARLDGVEGLWRIRFTTSHPRDFTDRLIEVVARAAKVCEHIHLPA 268
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G++ VL+RM RGYTRE YLDLV +IR +PDV L++D + GF GETEE+ ADTL L++
Sbjct: 269 QAGSNRVLQRMNRGYTREDYLDLVARIRAAVPDVSLTTDLMVGFPGETEEDFADTLDLVR 328
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGYD A+ F Y+ R T A + D VPE+VK RR+ ELI+ +E ++ G V
Sbjct: 329 RVGYDQAFTFVYNPRRGTPAA-GWPDQVPEDVKSRRIQELIQVQKEIGLARNRAEEGKVL 387
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+ PD L G+S V F
Sbjct: 388 EVLVEGPSATRPDL-LSGRSRTNKTVVF 414
>gi|148379760|ref|YP_001254301.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum A str. ATCC 3502]
gi|153933044|ref|YP_001384058.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum A str. ATCC 19397]
gi|153936669|ref|YP_001387598.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum A str. Hall]
gi|229890482|sp|A7FUL1.1|MIAB_CLOB1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890486|sp|A5I2S3.1|MIAB_CLOBH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|148289244|emb|CAL83340.1| putative radical SAM superfamily protein [Clostridium botulinum A
str. ATCC 3502]
gi|152929088|gb|ABS34588.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A
str. ATCC 19397]
gi|152932583|gb|ABS38082.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A
str. Hall]
Length = 450
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 257/456 (56%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINVIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV + + E + + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSVLKIQEKENSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEAEIKKLISEGYKEITLLGQNVNSYG------KDLEPN-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVLNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>gi|387817996|ref|YP_005678341.1| tRNA-i(6)A37 methylthiotransferase [Clostridium botulinum H04402
065]
gi|322806038|emb|CBZ03605.1| tRNA-i(6)A37 methylthiotransferase [Clostridium botulinum H04402
065]
Length = 450
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 258/456 (56%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
++++ G + ET+GCQMN D E + ++K GY E+A+VI NTC +R+ AE
Sbjct: 9 DINAIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EEREDADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV + + E + + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSVLKIQEKENSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEAEIKKLISEGYKEITLLGQNVNSYG------KDLEPN-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVLNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>gi|182678041|ref|YP_001832187.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Beijerinckia
indica subsp. indica ATCC 9039]
gi|229890430|sp|B2IIK5.1|MIAB_BEII9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|182633924|gb|ACB94698.1| RNA modification enzyme, MiaB family [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 510
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 250/443 (56%), Gaps = 39/443 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ++YGCQMNV D E + ++ GY+E + PE+A+++ +NTC IR++A KV+ L
Sbjct: 35 KLFVKSYGCQMNVYDAERMADLLAPEGYAET-SAPEDADLVILNTCHIREHAAEKVFSEL 93
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E + A GR P KIVV GC+A+ ++IL K VD+V GP +Y L
Sbjct: 94 GKLRLLKAEQQ---AAGR-----PVKIVVAGCVAQAEGEEILRRQKAVDLVVGPQSYHRL 145
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADI---SPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL V + ++T E+ + + P +I++ V AFV+V GC+ CSFC+VP
Sbjct: 146 PDLLRRVAHTPGLVDTEFPAEDKFDHLVAPQPEKIAERGVGAFVTVQEGCDKFCSFCVVP 205
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRPVE+I+ EV+ L GV+EVTL+GQNVN+Y+ G
Sbjct: 206 YTRGAETSRPVEAILAEVETLIASGVREVTLIGQNVNAYH-------------------G 246
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F++M A L+ R++ +R RYT+ HP D ++L+ RD P + ++HL
Sbjct: 247 FDAMTGAPA---SLASLMARVAAMPGLLRIRYTTSHPNDMGEDLIAAHRDIPALMPFLHL 303
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L M R + YL+L+ IR PD+ LSSDFI GF GETE + TL L
Sbjct: 304 PVQSGSDKILAAMNRRHKAGDYLELIASIRAARPDIALSSDFIVGFPGETEADFEATLAL 363
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD-SQVG 493
++ VG+ A+ F YS R T + D + E+VK +RL L +A E Q ++ + +G
Sbjct: 364 IEQVGFASAFSFKYSQRPGTPG-ADRPDQIDEDVKAQRLARL-QALLEEQRQAFNKAMIG 421
Query: 494 TVQLVLVEGPNKKAPDTELVGKS 516
V VL E P + ++ GK+
Sbjct: 422 RVLPVLFEKPGRHP--GQIAGKT 442
>gi|403069111|ref|ZP_10910443.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Oceanobacillus
sp. Ndiop]
Length = 518
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 260/444 (58%), Gaps = 43/444 (9%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E++ I+ GY N E+A++I +NTCAIR+ AE+KV+ + +
Sbjct: 81 TYGCQMNEHDTEVMAGILTEMGYESTSNT-EDADIILLNTCAIRENAENKVFGEIGHLKP 139
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPRL 200
LK E K ++ G V GCM+ E + D+IL + +D++ G LP+L
Sbjct: 140 LKLE-KPDLIIG-----------VCGCMSQEESVVDRILKKHQHIDLIFGTHNIHRLPQL 187
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
++E +G++ I + S E + P ++ K + A+V++M GC+ C++CIVP TRG+E
Sbjct: 188 IKEALFGKEMIVEVWSKEGDVIENLP-KVRKGKIKAWVNIMYGCDKFCTYCIVPMTRGKE 246
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
RSR E I++EV L +G +EVTLLGQNVN+Y K+ E + L + N + K
Sbjct: 247 RSRRPEDIIQEVRHLVAQGYQEVTLLGQNVNAYG------KDFE-DIQYGLGDLMNDIHK 299
Query: 321 VKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGN 380
+ + P R R+T+ HP+DF D L+ ++ N+ +IHLP Q+G+
Sbjct: 300 I----------------DIP--RVRFTTSHPRDFDDRLIEVLAQGGNLLDHIHLPVQSGS 341
Query: 381 SAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGY 440
+ +L++M R Y+RE YL+LV+KIR+ IP+ L++D I GF ETEE+ +T+TLM+ VG+
Sbjct: 342 TEILKKMNRKYSREDYLELVRKIRKAIPNATLTTDIIVGFPNETEEQFEETMTLMEEVGF 401
Query: 441 DMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLV 500
+ AY + YS RE T A R DDVPE+VK++RL L E + + + G VLV
Sbjct: 402 EAAYTYIYSPREGTPAARK-TDDVPEDVKKQRLYRLNELVNKQSAESMKKYDGQTVKVLV 460
Query: 501 EGPNKKAPDTELVGKSDRGHRVAF 524
EG +KK PD L G +++ V F
Sbjct: 461 EGESKKDPDV-LAGYTEKNKLVNF 483
>gi|237795210|ref|YP_002862762.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum Ba4 str. 657]
gi|229262035|gb|ACQ53068.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum Ba4
str. 657]
Length = 450
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 257/456 (56%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
++++ G+ + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINAIGKFFIETWGCQMNEEDSEKLSGMLKREGYVRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + L EV + + E+ + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFANYLNEVKKKDTSVLKIQEKEDIIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEAEIKKLISEGYKEITLLGQNVNSYG------KDLEPK-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------ITFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHNRFNRLVEVVNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRAGKLVNF 422
>gi|417908008|ref|ZP_12551775.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus capitis
VCU116]
gi|341595095|gb|EGS37773.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus capitis
VCU116]
Length = 514
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/447 (38%), Positives = 260/447 (58%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I+K GYS ++ + A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVMAGILKALGYSATTDINQ-ADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLP 198
LK+E P ++ V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLP 178
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LEE + + + S E + P ++ + S+ A+V++M GC+ C++CIVPFTRG
Sbjct: 179 EILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGSIKAWVNIMYGCDKFCTYCIVPFTRG 237
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
+ERSR E I+ EV EL +EG +E+TLLGQNVNSY K++E
Sbjct: 238 KERSRRPEDIINEVRELAREGYQEITLLGQNVNSYG------KDIED------------- 278
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ DLL+ +S ++ P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 279 -----LDYGLGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV +I+ IP++ L++D I G+ ETEE+ +TL+L
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVNRIKTAIPNIALTTDIIVGYPNETEEQFEETLSLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V ++ AY + YS R+ T A + D+VP EVK+ RL L + E + + VG +
Sbjct: 392 VEFEHAYTYLYSQRDGTPAAK-MKDNVPTEVKKERLQRLNKKVGEYSQKAMSKYVGKIVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK DT L G +D+ V F
Sbjct: 451 VLCEGASKK-DDTVLAGYTDKNKLVNF 476
>gi|345019810|ref|ZP_08783423.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Ornithinibacillus scapharcae TW25]
Length = 525
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 258/445 (57%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E++ I+ GY E A++I +NTCAIR+ AE+KV+ + +
Sbjct: 88 TYGCQMNEHDTEVMAGILSEMGYESTTETSE-ADLILLNTCAIRENAENKVFGEIGHLKP 146
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPRL 200
LK E K ++ G V GCM+ E + D+I+ + +D+V G LP L
Sbjct: 147 LKTE-KPDLILG-----------VCGCMSQEESVVDRIMKKHQHIDLVFGTHNIHRLPNL 194
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
++E +G++ + + S E + P + K + A+V++M GC+ C++CIVP TRG+E
Sbjct: 195 VQEAMFGKEQVVEVWSKEGDIIENLP-KARKGKIKAWVNIMYGCDKFCTYCIVPMTRGKE 253
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
RSR + I++E+ L EG +EVTLLGQNVN+Y G ++
Sbjct: 254 RSRRPDDIIQEIRHLAAEGYQEVTLLGQNVNAY------------GKDF----------- 290
Query: 321 VKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+ + RF DL+D + ++ P R R+T+ HP+DF D L+ ++ N+ +IHLP Q+G
Sbjct: 291 -EDIDYRFGDLMDDIRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHLPVQSG 347
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S VL+ M R YTRE YL++V+KIR+ IP+ L++D I GF ET+E+ +T+TL++ VG
Sbjct: 348 SSEVLKLMNRKYTREDYLEVVRKIREAIPNATLTTDIIVGFPNETDEQFEETMTLVEEVG 407
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
++ AY F YS RE T A + DDVPEEVK++RL L E + + S G VL
Sbjct: 408 FEAAYTFIYSPREGTPAAKKK-DDVPEEVKKQRLYRLNELVNKQSAASMKSYEGKTVKVL 466
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +KK P+ L G +++ V F
Sbjct: 467 VEGESKKDPNI-LAGYTEKNKLVNF 490
>gi|421837500|ref|ZP_16271663.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum CFSAN001627]
gi|409740346|gb|EKN40648.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum CFSAN001627]
Length = 450
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 256/456 (56%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINVIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV + + E + + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSVLKIQEKENSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L E KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEAEIKKLISEDYKEITLLGQNVNSYG------KDLEPN-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVLNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>gi|347753703|ref|YP_004861268.1| MiaB family RNA modification protein [Bacillus coagulans 36D1]
gi|347586221|gb|AEP02488.1| RNA modification enzyme, MiaB family [Bacillus coagulans 36D1]
Length = 515
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 179/453 (39%), Positives = 265/453 (58%), Gaps = 51/453 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY+ V E+A+V+ +NTCAIR+ AE+KV+ +
Sbjct: 70 KFYIRTYGCQMNEHDTEVMAGIFMQLGYTPTETV-EDADVVLLNTCAIRENAENKVFGEI 128
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK E K ++ G V GCM+ E + +KIL VD+V G
Sbjct: 129 GHLKPLKTE-KPDMLIG-----------VCGCMSQEESVVNKILQKHPHVDMVFGTHNIH 176
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L+E + + + S E + P ++ K ++ A+V++M GC+ C++CIVP+
Sbjct: 177 RLPHILKEAYMSKAMVVEVWSKEGDVIESLP-KVRKGNIKAWVNIMYGCDKFCTYCIVPY 235
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV EL +G KE+TLLGQNVN+Y + F
Sbjct: 236 TRGKERSRRPEDIIQEVRELAAKGYKEITLLGQNVNAY------------------GKDF 277
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + + GL DL+D L + P R R+T+ HP+DF D L+ ++ + N+ ++IHL
Sbjct: 278 DDL----EYGL--GDLMDDLRKINIP--RIRFTTSHPRDFDDRLIEVLAKKGNLVEHIHL 329
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S +L+ M R YTRE YL+LV+KI+ IPDV LS+D I GF ETEE+ +TL+L
Sbjct: 330 PVQSGSSEILKIMGRKYTREQYLELVRKIKAAIPDVALSTDIIVGFPNETEEQFEETLSL 389
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQ---RRLTELIEAFRESTGQCYDSQ 491
K VG++ AY F YS RE T A R D++P EVK+ +RL EL+ A+ ++ + Y+ Q
Sbjct: 390 YKEVGFETAYTFIYSPREGTPAAR-MKDNIPMEVKKERLQRLNELVNAYSKAAMEKYEGQ 448
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K P+ L G + + V F
Sbjct: 449 VVE---VLVEGESKNNPEI-LAGYTRKNKLVNF 477
>gi|168180374|ref|ZP_02615038.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum
NCTC 2916]
gi|226949042|ref|YP_002804133.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum A2 str. Kyoto]
gi|182668731|gb|EDT80709.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum
NCTC 2916]
gi|226843034|gb|ACO85700.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum A2
str. Kyoto]
Length = 450
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 255/456 (55%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINVIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV + + E + + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSVLKIQEKENSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L E KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEAEIKKLISEDYKEITLLGQNVNSYG------KDLEPN-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EKTLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVLNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>gi|336113897|ref|YP_004568664.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus coagulans 2-6]
gi|335367327|gb|AEH53278.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus coagulans 2-6]
Length = 515
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 179/453 (39%), Positives = 265/453 (58%), Gaps = 51/453 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY+ V E+A+V+ +NTCAIR+ AE+KV+ +
Sbjct: 70 KFYIRTYGCQMNEHDTEVMAGIFMQLGYTPTETV-EDADVVLLNTCAIRENAENKVFGEI 128
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK E K ++ G V GCM+ E + +KIL VD+V G
Sbjct: 129 GHLKPLKTE-KPDMLIG-----------VCGCMSQEESVVNKILQKHPHVDMVFGTHNIH 176
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L+E + + + S E + P ++ K ++ A+V++M GC+ C++CIVP+
Sbjct: 177 RLPYILKEAYMSKAMVVEVWSKEGDVIESLP-KVRKGNIKAWVNIMYGCDKFCTYCIVPY 235
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV EL +G KE+TLLGQNVN+Y + F
Sbjct: 236 TRGKERSRRPEDIIQEVRELAAKGYKEITLLGQNVNAY------------------GKDF 277
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + + GL DL+D L + P R R+T+ HP+DF D L+ ++ + N+ ++IHL
Sbjct: 278 DDL----EYGL--GDLMDDLRKINIP--RIRFTTSHPRDFDDRLIEVLAKKGNLVEHIHL 329
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S +L+ M R YTRE YL+LV+KI+ IPDV LS+D I GF ETEE+ +TL+L
Sbjct: 330 PVQSGSSEILKIMGRKYTREQYLELVRKIKAAIPDVALSTDIIVGFPNETEEQFEETLSL 389
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQ---RRLTELIEAFRESTGQCYDSQ 491
K VG++ AY F YS RE T A R D++P EVK+ +RL EL+ A+ ++ + Y+ Q
Sbjct: 390 YKEVGFETAYTFIYSPREGTPAAR-MKDNIPMEVKKERLQRLNELVNAYSKAAMEKYEGQ 448
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K P+ L G + + V F
Sbjct: 449 VVE---VLVEGESKNNPEI-LAGYTRKNKLVNF 477
>gi|339009505|ref|ZP_08642077.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Brevibacillus laterosporus LMG 15441]
gi|421875805|ref|ZP_16307387.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Brevibacillus
laterosporus GI-9]
gi|338773983|gb|EGP33514.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Brevibacillus laterosporus LMG 15441]
gi|372455212|emb|CCF16936.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Brevibacillus
laterosporus GI-9]
Length = 503
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 258/444 (58%), Gaps = 47/444 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + I + GY+ + E A+VI NTCAIR+ AE KV+ L +
Sbjct: 68 TYGCQMNEHDTETMAGIFEAMGYTATEDTME-ADVILFNTCAIREGAEDKVFGELGHMKH 126
Query: 143 LKREWKKNVATGRSQSKHPPKIVVL-GCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LKR +P I+ L GCM+ E++ +K+L + VD++ G LP
Sbjct: 127 LKR-------------NNPNLILGLCGCMSQEEKVVNKVLRSYSEVDMIFGTHNIHRLPV 173
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL + + ++ + + S E + P + + A+V++M GC+ C++CIVP+TRG+
Sbjct: 174 LLRDAMFSKEMVIEVWSKEGDIIENMP-KTRTGDIKAWVNIMYGCDKFCTYCIVPYTRGK 232
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E +V EV EL ++G KE+ +LGQNVN+Y K+ E
Sbjct: 233 ERSRRPEDVVAEVRELARQGFKEIMVLGQNVNAYG------KDFED-------------- 272
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
+K GL DLLD L ++ P R R+T+ HP+DF D L+ ++ N+ + IHLPAQ+
Sbjct: 273 --RKYGL--GDLLDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLVEQIHLPAQS 326
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G+S VL++M R YTRE Y++LV+KI+ IPDV LS+D I GF GETEE+ +TL+LMK V
Sbjct: 327 GSSEVLKKMARKYTREHYMELVRKIKAAIPDVSLSTDIIVGFPGETEEQFQETLSLMKEV 386
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
YD AY F YS RE T A + VD+VPEEVK+ RL L+ E + + VG +
Sbjct: 387 EYDSAYTFIYSPREGTPA-ASMVDNVPEEVKKDRLQRLMAVQNEISLRKNQEMVGKTYEL 445
Query: 499 LVEGPNKKAPDTELVGKSDRGHRV 522
L+EG ++K P+ L G++ G V
Sbjct: 446 LIEGESRKNPEV-LAGRTRTGKLV 468
>gi|224537220|ref|ZP_03677759.1| hypothetical protein BACCELL_02097, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224521143|gb|EEF90248.1| hypothetical protein BACCELL_02097 [Bacteroides cellulosilyticus
DSM 14838]
Length = 337
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 206/332 (62%), Gaps = 24/332 (7%)
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
AY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+MRGCNN C++CI
Sbjct: 1 AYLTLPDLVAAVEAGEKAINVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCI 60
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK P
Sbjct: 61 VPYTRGRERSRDVESILNEVSDLVAKGYKEVTLLGQNVNSYR----FEK---PNGEV--- 110
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ F LL ++ P +R R+T+ HPKD DE L ++ PNVCK+I
Sbjct: 111 -------------VTFPMLLRTVAEAAPGVRVRFTTSHPKDMSDETLEVIAQVPNVCKHI 157
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S +L+ M R YTRE YLD V I +I+PD GLS+D GF ETEE+H +L
Sbjct: 158 HLPVQSGSSRILKLMNRKYTREWYLDRVDAIHRIVPDCGLSTDIFSGFHSETEEDHQLSL 217
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+LM+ YD A+MF YS R T+A ++ DDVPEEVK RRL E+I + + +
Sbjct: 218 SLMEKCAYDSAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIALQNRLSAESNARCI 277
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VLVEG +K++ + +LVG++++ V F
Sbjct: 278 GKTYEVLVEGVSKRSRE-QLVGRTEQNRVVVF 308
>gi|18310075|ref|NP_562009.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
perfringens str. 13]
gi|110800579|ref|YP_695795.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
perfringens ATCC 13124]
gi|168207484|ref|ZP_02633489.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens E
str. JGS1987]
gi|168214970|ref|ZP_02640595.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
CPE str. F4969]
gi|168218108|ref|ZP_02643733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
NCTC 8239]
gi|169342621|ref|ZP_02629366.2| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens C
str. JGS1495]
gi|182626330|ref|ZP_02954085.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens D
str. JGS1721]
gi|422345797|ref|ZP_16426711.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Clostridium perfringens WAL-14572]
gi|422873993|ref|ZP_16920478.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
perfringens F262]
gi|81767470|sp|Q8XLE9.1|MIAB_CLOPE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|123049876|sp|Q0TRE5.1|MIAB_CLOP1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|18144754|dbj|BAB80799.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|110675226|gb|ABG84213.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
ATCC 13124]
gi|169299263|gb|EDS81332.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens C
str. JGS1495]
gi|170661180|gb|EDT13863.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens E
str. JGS1987]
gi|170713591|gb|EDT25773.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
CPE str. F4969]
gi|177908349|gb|EDT70894.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens D
str. JGS1721]
gi|182379874|gb|EDT77353.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
NCTC 8239]
gi|373227462|gb|EHP49776.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Clostridium perfringens WAL-14572]
gi|380304988|gb|EIA17271.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
perfringens F262]
Length = 447
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 249/445 (55%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN D E + ++K+ GY N E A +I NTC +R+ AE+KV+ L
Sbjct: 16 TYGCQMNEEDSEKLSGMLKSQGYERTEN-KEEASIIIFNTCCVRENAENKVFGNLGQLKQ 74
Query: 143 LKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK+ K+P ++ + GCM ++ + DK+L VD++ G P
Sbjct: 75 LKK-------------KNPNLVIAICGCMMQQVGMADKVLKTFPYVDIIFGTHNAHKFPE 121
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L V + +L+ EE + P+ K+ V AFV++M GCNN C++CIVP+ RGR
Sbjct: 122 YLHRVLQEGVQVKEILNKEEGIVEGLPID-RKSDVKAFVTIMYGCNNFCTYCIVPYVRGR 180
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+KE++EL +G KE+TLLGQNVNSY G+E++++
Sbjct: 181 ERSRKSEDIIKEIEELVSQGYKEITLLGQNVNSYG--KGLEEDID--------------- 223
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
FA LL +++ R R+ + HPKD D+++ +++ +C+ +HLP Q+G
Sbjct: 224 --------FAGLLRKVNEVKGLERVRFMTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSG 275
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S +L+ M R Y RE YLDLV+KI+ IPDV L++D I GF GETEE+ DTL+L + VG
Sbjct: 276 SSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVG 335
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
YD A+ F YS R T A + + +P+++K R L+EA + G V VL
Sbjct: 336 YDSAFTFIYSRRNHTPADK-MENQIPDDIKHDRFNRLVEAINKKVVIKNKEYEGKVVEVL 394
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEGP+K +T+L G++ G V F
Sbjct: 395 VEGPSKN-DETKLTGRTRNGKLVNF 418
>gi|296121908|ref|YP_003629686.1| MiaB family RNA modification protein [Planctomyces limnophilus DSM
3776]
gi|296014248|gb|ADG67487.1| RNA modification enzyme, MiaB family [Planctomyces limnophilus DSM
3776]
Length = 501
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 253/467 (54%), Gaps = 56/467 (11%)
Query: 60 APASEVSSATGS-------EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVP 112
AP +E S+A + E G++Y ET GCQMN+ D E+V++ ++ GY E+ + P
Sbjct: 4 APKTETSTALSAHEQGAPGERDHNGKLYIETVGCQMNMLDSELVVAALRREGY-ELTSQP 62
Query: 113 ENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAE 172
++A+ I NTC++R++AEHK++ L +++ + V I V+GCMA+
Sbjct: 63 DDADTILFNTCSVREHAEHKIYSALGRLKHARKQRPQQV------------IGVMGCMAQ 110
Query: 173 RLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQ---------KGINTLLSLEETYAD 223
+ + I D VD+V G ++P L++ + + T + ++
Sbjct: 111 KDQSLIFDRAPHVDIVVGTGQMAEIPGLIKNARKDRERALAVSLDRKAGTRREVSASFQS 170
Query: 224 ISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGV 280
P+R + + AFV +M GC+ C++C+VP TRG E+SR I+ EV L +GV
Sbjct: 171 YDPLREPEMRPSPYQAFVRIMFGCDKFCTYCVVPMTRGPEQSRLPSEILAEVAHLAGQGV 230
Query: 281 KEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFP 340
KEVTLLGQ VNSY K VE G WRLS+ +M + M
Sbjct: 231 KEVTLLGQTVNSY-------KCVENGKTWRLSDLLAAMHETPGM---------------- 267
Query: 341 EMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLV 400
+RF++ + +P+D D+LL +RD P YIH+P Q G VL RM+RGYT Y ++
Sbjct: 268 -LRFKFVTSYPRDMTDDLLIALRDLPKCSHYIHVPLQHGCDDVLTRMKRGYTTAHYREMH 326
Query: 401 QKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNY 460
Q+I++ +P +SSDFI GFCGETEE H +L ++ + +++F YS R T A +
Sbjct: 327 QRIKEYLPYSAVSSDFIVGFCGETEESHQKSLEAIREYRFKNSFIFKYSERPGTKAQSLF 386
Query: 461 VDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKA 507
DD+P+EVK+RR EL+E E + + + +G VLVEGP+K A
Sbjct: 387 QDDIPDEVKKRRNQELLELQNEISEEDNAAFIGREVEVLVEGPSKNA 433
>gi|406981912|gb|EKE03298.1| hypothetical protein ACD_20C00223G0005 [uncultured bacterium]
Length = 440
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 163/447 (36%), Positives = 258/447 (57%), Gaps = 40/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ET GCQMN +D E + I+ + GY E I ENA+++ INTC+IR AE+K + L
Sbjct: 4 KVYIETLGCQMNKSDTERIFGILGDIGY-EKIEEAENADLLIINTCSIRAAAENKAYSYL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +WKK SK KI + GC+A+ K+ + + +D++ G +L
Sbjct: 63 GVW----GKWKK--------SKPELKIAMCGCVAQHTKESLFNKAPYIDLIFGTHNIAEL 110
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL ++D +K + L + E+ + S +R + ++A++ ++ GC+ C++CIVP+TR
Sbjct: 111 PELLSKLDSQEKVYSVLQTPYESNGEFSIIR--EKGISAWLPIIEGCDYFCTYCIVPYTR 168
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GR+RSR E I+KE ++ EG KE+ LLGQ V+SY + FN
Sbjct: 169 GRQRSRKPEDIIKEARDIANEGYKEIILLGQTVDSY------------------GKDFND 210
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ A+LL L+ +R R+ + HP D D L+ +++ VC+Y H+P Q
Sbjct: 211 E------NINLANLLRELNKIENILRIRFVTSHPADITDNLISTVKELDKVCEYFHIPMQ 264
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+ +L++MRRGYTRE Y+ LV+KIR +PDVG++SDFI GF ETEE+ DTLT+++
Sbjct: 265 SGNTEILKQMRRGYTREDYITLVEKIRSQMPDVGITSDFIAGFPRETEEQFEDTLTIVEQ 324
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+ +D AYS R+RT A + + +P+++K++RL L E ++ST + + VG V
Sbjct: 325 ITFDHCNTAAYSPRKRTPAAV-WKEQLPQDIKKKRLNLLNEKVKQSTVKSNEKYVGRVLE 383
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL E N+K + L G++ V F
Sbjct: 384 VLAENYNEKEGNIILNGRTRNNKIVHF 410
>gi|110803553|ref|YP_698478.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
perfringens SM101]
gi|123341843|sp|Q0STS9.1|MIAB_CLOPS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|110684054|gb|ABG87424.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium perfringens
SM101]
Length = 447
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 249/445 (55%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN D E + ++K+ GY N E A +I NTC +R+ AE+KV+ L
Sbjct: 16 TYGCQMNEEDSEKLSGMLKSQGYERTEN-KEEASIIIFNTCCVRENAENKVFGNLGQLKQ 74
Query: 143 LKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK+ K+P ++ + GCM ++ + DK+L VD++ G P
Sbjct: 75 LKK-------------KNPNLVIAICGCMMQQVGMADKVLKTFPYVDIIFGTHNAHKFPE 121
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L V + +L+ EE + P+ K+ V AFV++M GCNN C++CIVP+ RGR
Sbjct: 122 YLHRVLQEGVQVKEILNKEEGIVEGLPID-RKSDVKAFVTIMYGCNNFCTYCIVPYVRGR 180
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+KE++EL +G KE+TLLGQNVNSY G+E++++
Sbjct: 181 ERSRKSEDIIKEIEELVSKGYKEITLLGQNVNSYG--KGLEEDID--------------- 223
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
FA LL +++ R R+ + HPKD D+++ +++ +C+ +HLP Q+G
Sbjct: 224 --------FAGLLRKVNEVKGLERVRFMTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSG 275
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S +L+ M R Y RE YLDLV+KI+ IPDV L++D I GF GETEE+ DTL+L + VG
Sbjct: 276 SSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVG 335
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
YD A+ F YS R T A + + +P+++K R L+EA + G V VL
Sbjct: 336 YDSAFTFIYSRRNHTPADK-MENQIPDDIKHDRFNRLVEAINKKVVIKNKEYEGKVVEVL 394
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEGP+K +T+L G++ G V F
Sbjct: 395 VEGPSKN-DETKLTGRTRNGKLVNF 418
>gi|168184857|ref|ZP_02619521.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum Bf]
gi|182672056|gb|EDT84017.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum Bf]
Length = 450
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 256/456 (56%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
++++ G+ + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINAIGKFFIETWGCQMNEEDSEKLSGMLKREGYVRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK K+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------YKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + L EV + + E+ + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFANYLNEVKKKDTSVLKIQEKEDIIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEAEIKKLISEGYKEITLLGQNVNSYG------KDLEPK-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------ITFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHNRFNRLVEVVNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRAGKLVNF 422
>gi|242373585|ref|ZP_04819159.1| 2-methylthioadenine synthetase [Staphylococcus epidermidis
M23864:W1]
gi|242348948|gb|EES40550.1| 2-methylthioadenine synthetase [Staphylococcus epidermidis
M23864:W1]
Length = 514
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/446 (39%), Positives = 261/446 (58%), Gaps = 45/446 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I+K GYS ++ + A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVMAGILKALGYSATSDINQ-ADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + + I V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKERPECL------------IGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + S+ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGSIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+ EV EL +EG +E+TLLGQNVNSY K++E G ++ L
Sbjct: 239 ERSRRPEDIINEVRELAREGYQEITLLGQNVNSYG------KDIE-GLDYGL-------- 283
Query: 320 KVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
DLL+ +S ++ P R R+T+ HP DF D ++ ++ + N+ +IHLP Q+
Sbjct: 284 ---------GDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQS 332
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
GN+AVL+ M R YTRE+YLDLV +I+ IPD+ L++D I G+ ETEE+ +TL+L V
Sbjct: 333 GNNAVLKIMGRKYTRESYLDLVSRIKNAIPDIALTTDIIVGYPNETEEQFEETLSLYDEV 392
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
++ AY + YS R+ T A + D+VP EVK+ RL L + E + + G + V
Sbjct: 393 EFEHAYTYLYSQRDGTPAAK-MKDNVPTEVKKERLQRLNKKVGEYSQKAMSQYEGEIVTV 451
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
L EG +KK DT L G + + V F
Sbjct: 452 LCEGSSKK-DDTVLAGYTAKNKLVNF 476
>gi|331269503|ref|YP_004395995.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum
BKT015925]
gi|329126053|gb|AEB75998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum
BKT015925]
Length = 452
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 255/452 (56%), Gaps = 45/452 (9%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+ R + T+GCQMN D E + ++K GY+ ++ ++A+V+ NTC +R+ AE KV+
Sbjct: 15 EKRFFISTWGCQMNEEDSEKISGLLKGIGYTRT-DIRDDADVVIFNTCCVRENAEQKVYG 73
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKI-VVLGCMAER--LKDKILDADKMVDVVCGPD 192
L LKR K+P I +V GCM ++ + +K+++ VD++ G
Sbjct: 74 HLGELKALKR-------------KNPDLILIVTGCMMQQKGMPEKVMEKFPHVDIIAGTY 120
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP +E V K I + E+ + PV K+ + AFV++M GCNN CS+CI
Sbjct: 121 NSYKLPEYIERVKTEGKSIIEIWDKEKDIVEGLPVD-RKSDIKAFVTIMYGCNNFCSYCI 179
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+ RGRERSR ++I+ E+ +L +G KE+TLLGQNVNSY K + P N
Sbjct: 180 VPYVRGRERSRDPQNIIDEIKDLVSKGYKEITLLGQNVNSYG------KGLTPEMN---- 229
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
FADLL ++ R R+ + HPKD DEL+ M + VC+
Sbjct: 230 ---------------FADLLRMVNKIEGLERIRFMTSHPKDVSDELIKAMAECEKVCEQG 274
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
H Q+G++ +LE+M R YTRE YL+LV+K+R +P+VG+S+D I G+ GETEE+ +TL
Sbjct: 275 HFALQSGSTKILEKMNRKYTREDYLNLVKKLRAAMPNVGISTDIIVGYPGETEEDFQETL 334
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+++K + +D A+ F YS RE T A + + D VP++VK R L+EA E +
Sbjct: 335 SIVKEIEFDSAFTFIYSKREGTPAAK-HEDQVPDDVKHVRFNRLVEAINEIMSRKNKKFD 393
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEGP+K DT+L+G++ G V F
Sbjct: 394 GEVVEVLVEGPSKN-DDTKLMGRTRTGKLVNF 424
>gi|223044509|ref|ZP_03614536.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus capitis
SK14]
gi|222442106|gb|EEE48224.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus capitis
SK14]
Length = 514
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 259/447 (57%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I+K GYS ++ + A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVMAGILKALGYSATTDINQ-ADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLP 198
LK+E P ++ V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLP 178
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LEE + + + S E + P ++ + S+ A+V++M GC+ C++CIVPFTRG
Sbjct: 179 EILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGSIKAWVNIMYGCDKFCTYCIVPFTRG 237
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
+ERSR E I+ EV EL +EG +E+TLLGQNVNSY K++E
Sbjct: 238 KERSRRPEDIINEVRELAREGYQEITLLGQNVNSYG------KDIED------------- 278
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ DLL+ +S ++ P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 279 -----LDYGLGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV +I+ IP++ L++D I G+ ETEE+ +TL+L
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVNRIKTAIPNIALTTDIIVGYPNETEEQFEETLSLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V ++ AY + YS R+ T A + D+VP EVK+ RL L + E + + G +
Sbjct: 392 VEFEHAYTYLYSQRDGTPAAK-MKDNVPTEVKKERLQRLNKKVGEYSQKAMSKYEGKIVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK DT L G +D+ V F
Sbjct: 451 VLCEGASKK-DDTVLAGYTDKNKLVNF 476
>gi|149183373|ref|ZP_01861809.1| YmcB [Bacillus sp. SG-1]
gi|148848916|gb|EDL63130.1| YmcB [Bacillus sp. SG-1]
Length = 521
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 258/450 (57%), Gaps = 44/450 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + ++A+VI +NTCAIR+ AE+KV+ L
Sbjct: 68 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATDNTDDADVILLNTCAIRENAENKVFGEL 126
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LKRE K I V GCM+ E + +KIL VD++ G
Sbjct: 127 GHLKHLKRE------------KPELLIGVCGCMSQEESVVNKILKTYHQVDMIFGTHNIH 174
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L E + + + S E + P ++ + ++ A+V++M GC+ C++CIVP+
Sbjct: 175 RLPNILNEAYMSKAMVVEVWSKEGDVIENLP-KVRRGNIKAWVNIMYGCDKFCTYCIVPY 233
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV L +G +EVTLLGQNVN+Y K++E N+ L
Sbjct: 234 TRGKERSRRPEEIIQEVRHLAAQGYQEVTLLGQNVNAYG------KDIEDLENYGL---- 283
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L ++ P R R+T+ HP+DF D L+ ++ + N+ ++IHL
Sbjct: 284 -------------GDLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKKGNLVEHIHL 328
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+SAVL+ M R YTRE +L+LV KI+ +P V L++D I G+ ETEE+ +TL+L
Sbjct: 329 PVQSGSSAVLKIMARKYTRERFLELVGKIKAAMPGVALTTDIIVGYPNETEEQFEETLSL 388
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG++ A+ + YS RE T A + D+VP EVK+ RL L + E +G+ G
Sbjct: 389 YREVGFESAFTYIYSPREGTPAAK-MNDNVPMEVKKERLQRLNQLVNEYSGEALKQYEGK 447
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +KK P+ L G + R V F
Sbjct: 448 IVEVLVEGESKKNPEI-LAGYTRRSKLVNF 476
>gi|23099083|ref|NP_692549.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Oceanobacillus
iheyensis HTE831]
gi|81746368|sp|Q8EQR4.1|MIAB_OCEIH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|22777311|dbj|BAC13584.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 519
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 257/446 (57%), Gaps = 47/446 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E++ I+ GY E V E A++I +NTCAIR+ AE+KV+ + +
Sbjct: 82 TYGCQMNEHDTEVMAGILSEMGY-ESTTVTEEADIILLNTCAIRENAENKVFGEIGHLKP 140
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK E +P I+ V GCM+ E + D+IL + +D++ G LP
Sbjct: 141 LKLE-------------NPDLIIGVCGCMSQEESVVDRILQKHQHIDLIFGTHNIHRLPH 187
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L++E +G++ I + S E + P + K + A+V++M GC+ C++CIVP TRG+
Sbjct: 188 LVKEALFGKEMIVEVWSKEGDIIENLP-KARKGKIKAWVNIMYGCDKFCTYCIVPMTRGK 246
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR + I++EV L +G +EVTLLGQNVN+Y +++E G
Sbjct: 247 ERSRRPKDIIQEVRHLVAQGYQEVTLLGQNVNAYGKDF---EDIEYG------------- 290
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
DL++ + ++ P R R+T+ HP+DF D L+ ++ N+ +IHLP Q+
Sbjct: 291 --------LGDLMNDIHKIDIP--RVRFTTSHPRDFDDRLIEVLAQGGNLLDHIHLPVQS 340
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G+S +L++M R YTRE YL+LV+KIR +P+ L++D I GF ETEE+ +T+TL++ V
Sbjct: 341 GSSEILKKMNRKYTREEYLELVRKIRIAMPNATLTTDIIVGFPNETEEQFEETMTLVEEV 400
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
G++ AY F YS RE T A R DDVPEEVK++RL L E + + G V
Sbjct: 401 GFEAAYTFIYSPREGTPAARKK-DDVPEEVKKQRLYRLNELVNKQSAASMKDYAGKKVKV 459
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +KK P+ L G +++ V F
Sbjct: 460 LVEGESKKDPEV-LAGYTEKNKLVNF 484
>gi|253681530|ref|ZP_04862327.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum D
str. 1873]
gi|253561242|gb|EES90694.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum D
str. 1873]
Length = 447
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 255/452 (56%), Gaps = 45/452 (9%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+ R + T+GCQMN D E + ++K GY+ ++ ++A+V+ NTC +R+ AE KV+
Sbjct: 10 EKRFFISTWGCQMNEEDSEKISGLLKGIGYTRT-DIRDDADVVIFNTCCVRENAEQKVYG 68
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKI-VVLGCMAER--LKDKILDADKMVDVVCGPD 192
L LKR K+P I +V GCM ++ + +K+++ VDV+ G
Sbjct: 69 HLGELKALKR-------------KNPDLILIVTGCMMQQKGMPEKVMEKFPHVDVIAGTY 115
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP +E V K I + E+ + PV K+ + AFV++M GCNN CS+CI
Sbjct: 116 NSYKLPEYIERVKTEGKSIIEIWDKEKDIVEGLPVD-RKSDIKAFVTIMYGCNNFCSYCI 174
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+ RGRERSR ++IV E+ +L +G KE+TLLGQNVNSY G+ E+
Sbjct: 175 VPYVRGRERSRDPQNIVDEIKDLVSKGYKEITLLGQNVNSYG--KGLIPEI--------- 223
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
FADLL ++ R R+ + HPKD DEL+ M + VC+
Sbjct: 224 --------------NFADLLRMVNKIEGLERIRFMTSHPKDVSDELIKAMAECEKVCEQG 269
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
H Q+G++ +LE+M R YTRE YL+LV+K+R +P++G+S+D I G+ GETEE+ +TL
Sbjct: 270 HFALQSGSTKILEKMNRKYTREDYLNLVKKLRVAMPNIGISTDIIVGYPGETEEDFEETL 329
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+++K + +D A+ F YS RE T A + + D VP++VK R L+EA E +
Sbjct: 330 SIVKEIEFDSAFTFIYSKREGTPAAK-HEDQVPDDVKHARFNRLVEAINEIMARKNKKFD 388
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEGP+K DT+L+G++ G V F
Sbjct: 389 GEVVEVLVEGPSKN-DDTKLMGRTRTGKLVNF 419
>gi|354581491|ref|ZP_09000395.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus lactis 154]
gi|353201819|gb|EHB67272.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus lactis 154]
Length = 519
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 258/446 (57%), Gaps = 48/446 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + +++ GY + E A++I +NTCAIR+ AE KV+ L +
Sbjct: 80 TYGCQMNEHDSETIKGLLEQMGYQSTEDRKE-ADIILLNTCAIRENAEDKVFGELGHLKH 138
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPRL 200
LK E K ++ G V GCM+ E + ++IL VD++ G LP L
Sbjct: 139 LKTE-KPDMLLG-----------VCGCMSQEEAVVNRILQKHGFVDLIFGTHNIHRLPHL 186
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
++E + ++ + + S E + P + + + +V++M GC+ C++CIVP+TRG+E
Sbjct: 187 IQEALFSKEMVVEVWSKEGDIVENLPKK--REGLRGWVNIMYGCDKFCTYCIVPYTRGKE 244
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSMC 319
RSR E ++ EV EL ++G KE+TLLGQNVN+Y D + +E
Sbjct: 245 RSRRPEDVIAEVRELARQGYKEITLLGQNVNAYGKDFTDIE------------------- 285
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
RF DL+D + ++ P R R+T+ HP+DF D L+ ++ N+ ++IHLP Q+
Sbjct: 286 ------YRFGDLMDDIRKIDIP--RVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQS 337
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G+S VL+RM R YTRE+YL+LV+KI+Q IPDV L++D I GF GET+E+ +TL+L++ V
Sbjct: 338 GSSQVLKRMSRKYTRESYLELVRKIKQAIPDVVLTTDIIVGFPGETDEQFEETLSLVREV 397
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
GYD A+ F YS RE T A D+VP EVK +RL L E E + + D +G V
Sbjct: 398 GYDSAFTFIYSPREGTPA-AVMEDNVPMEVKSQRLQRLNEVINEFSRKSNDQLLGATVEV 456
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +K D+ L G++ V F
Sbjct: 457 LVEGISKNN-DSVLSGRTRSNKLVHF 481
>gi|345874156|ref|ZP_08825972.1| adenosine tRNA methylthiotransferase [Neisseria weaveri LMG 5135]
gi|343970801|gb|EGV38972.1| adenosine tRNA methylthiotransferase [Neisseria weaveri LMG 5135]
Length = 444
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 255/456 (55%), Gaps = 44/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+V +++ T+GCQMN D E +LS++ + E A++I NTC++R+ A+
Sbjct: 2 DVDFMKKVFIRTFGCQMNEYDSEKMLSVLAEDDELVQVGEAEEADIILFNTCSVREKAQE 61
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCG 190
KV+ L LK +K+P I+ V GC+A + ++I+ VDVV G
Sbjct: 62 KVFSDLGRVKSLK-------------AKNPNLIIGVGGCVASQEGEEIVKRAPFVDVVFG 108
Query: 191 PDAYRDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
P LP+L++E + G+ ++ E + + P R+ S AFVS+M GC+ CS
Sbjct: 109 PQTLHRLPKLIDEKKETGRSQVDISFPEIEKFDHLPPARVEGGS--AFVSIMEGCSKYCS 166
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
FC+VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 167 FCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMEDG--- 217
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNV 368
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P +
Sbjct: 218 -------EICD-------FAMLL-RIVHEIPGIERMRFTTSHPREFSDRIIECYRDLPKL 262
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
++HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE+E
Sbjct: 263 VSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEQEF 322
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
TL L+K + +D++++F YS R T A N DD P+E K RRL L E T +
Sbjct: 323 EQTLKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPQEEKVRRLEALNEVIEAETARIN 381
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
S +GTVQ LVEG +KK PD +L G++ V F
Sbjct: 382 QSMLGTVQRCLVEGVSKKDPD-QLQGRTANNRVVNF 416
>gi|418324135|ref|ZP_12935386.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
pettenkoferi VCU012]
gi|365227632|gb|EHM68824.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
pettenkoferi VCU012]
Length = 529
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 182/457 (39%), Positives = 263/457 (57%), Gaps = 52/457 (11%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGY--SEVINVPENAEVIFINTCAIRDYAEH 131
+GR + +TYGCQMN +D E++ I+ GY +E IN A+VI INTCAIR+ AE+
Sbjct: 80 GRGRTFMIKTYGCQMNAHDTEVMAGILSALGYQPTEDINT---ADVILINTCAIRENAEN 136
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVC 189
KV+ + LKRE + +V G V GCM+ E + +KIL + + VD++
Sbjct: 137 KVFSEIGNLKHLKRE-RPDVLLG-----------VCGCMSQEESVVNKILKSFQNVDMIF 184
Query: 190 GPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
G LP +LEE + + + S E + P ++ + ++ A+V++M GC+ C+
Sbjct: 185 GTHNIHRLPEILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCT 243
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGAN 308
+CIVPFTRG+ERSR E I++EV EL +EG +EVTLLGQNVNSY D G++
Sbjct: 244 YCIVPFTRGKERSRKPEDIIQEVRELAREGYQEVTLLGQNVNSYGKDIDGLD-------- 295
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
GL DLL +S ++ P R R+T+ HP DF D ++ ++ N
Sbjct: 296 ---------------YGL--GDLLADISKIDIP--RVRFTTSHPWDFTDRMIEVIAQGGN 336
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
+ +IHLP Q+GN+AVL+ M R YTRE+YL+LV +I+ IPDV L++D I G+ ETEE+
Sbjct: 337 IVPHIHLPVQSGNNAVLKIMGRKYTRESYLNLVDRIKAQIPDVALTTDIIVGYPNETEEQ 396
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
+TL+L VG++ AY + YS R+ T A R DDVP+EVK+ RL L +G+
Sbjct: 397 FEETLSLYDEVGFEHAYTYLYSERDGTPAAR-MKDDVPKEVKKDRLQRLNRKVAAYSGEA 455
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VL EG +KK D L G +++ V F
Sbjct: 456 MKPYEGEVVSVLCEGTSKK-DDEVLAGYTEKNKLVNF 491
>gi|314933472|ref|ZP_07840837.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus caprae
C87]
gi|313653622|gb|EFS17379.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus caprae
C87]
Length = 514
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 171/447 (38%), Positives = 259/447 (57%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I+K GYS ++ + A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVMAGILKALGYSATTDINQ-ADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLP 198
LK+E P ++ V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLP 178
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LEE + + + S E + P ++ + S+ A+V++M GC+ C++CIVPFTRG
Sbjct: 179 EILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGSIKAWVNIMYGCDKFCTYCIVPFTRG 237
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
+ERSR E I+ EV EL +EG +E+TLLGQNVNSY K++E
Sbjct: 238 KERSRRPEDIINEVRELAREGYQEITLLGQNVNSYG------KDIED------------- 278
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ DLL+ +S ++ P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 279 -----LDYGLGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV +I+ IP++ L++D I G+ ETEE+ +TL+L
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVNRIKTAIPNIALTTDIIVGYPNETEEQFEETLSLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V ++ AY + YS R+ T A + D+VP EVK+ RL L + E + + G +
Sbjct: 392 VEFEHAYTYLYSQRDGTPAAK-MKDNVPTEVKKERLQRLNKKVGEYSQKAMSQYEGEIVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK DT L G +++ V F
Sbjct: 451 VLCEGASKK-DDTVLAGYTEKNKLVNF 476
>gi|410458684|ref|ZP_11312441.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
azotoformans LMG 9581]
gi|409931034|gb|EKN68022.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
azotoformans LMG 9581]
Length = 515
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 263/456 (57%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
EV + + Y TYGCQMN +D E++ I+ G+ E + E A++I +NTCA+R+ AE+
Sbjct: 64 EVGKEKKFYIRTYGCQMNEHDTEVMAGILTEMGF-ENTDSTEEADIILLNTCAVRENAEN 122
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVC 189
KV+ + + LKRE K ++ G V GCM+ E + +++L + VD++
Sbjct: 123 KVFGEIGHLKQLKRE-KPDLILG-----------VCGCMSQEEGVVNRLLQKHQQVDLIF 170
Query: 190 GPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
G LP+LL+E +G++ + + S E + P +I + A+V++M GC+ C+
Sbjct: 171 GTHNIHRLPQLLKEAMFGKERVVEVWSKEGDVIENLP-KIRNGKIKAWVNIMYGCDKFCT 229
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
+CIVP+TRG+ERSR E I+ EV +L ++G KE+TLLGQNVN+Y
Sbjct: 230 YCIVPYTRGKERSRRPEDIIDEVRDLARQGYKEITLLGQNVNAY---------------- 273
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ F M K GL DL+D + ++ P R R+T+ HP+DF D L+ ++ N+
Sbjct: 274 --GKDFEDM----KYGL--GDLMDEIRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNL 323
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+G++ +L+ M R YTRE YL+LV+KI++ IP+V L++D I GF ET+E+
Sbjct: 324 MDHIHLPVQSGSTEMLKIMSRKYTREQYLELVRKIKEAIPNVSLTTDLIVGFPNETDEQF 383
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
DTL+L + V YD AY F YS RE T A + VD+VP EVK+ RL L E + +
Sbjct: 384 EDTLSLYREVEYDSAYTFIYSPREGTPAA-DMVDNVPMEVKKERLQRLNALVNEISAKKN 442
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +K P+ L G + + V F
Sbjct: 443 KQYQDKIVEVLVEGESKNNPEI-LAGYTRKNKLVNF 477
>gi|260892471|ref|YP_003238568.1| MiaB family RNA modification protein [Ammonifex degensii KC4]
gi|260864612|gb|ACX51718.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
Length = 447
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/439 (37%), Positives = 252/439 (57%), Gaps = 46/439 (10%)
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
++G+ Y TYGCQMN D E++ +++ GY+ PE A++I +NTC +R+ AE+KV
Sbjct: 5 QARGKYYIFTYGCQMNEWDSEVMAGLVEEMGYTRA-GSPEEADLILLNTCCVRESAENKV 63
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCG 190
W L + GR + + P ++ V GC+ +R +I VD++ G
Sbjct: 64 WGLLG-------------SLGRLKQRRPWLLLGVTGCLPQRPGAAAEIKRRFPFVDLIVG 110
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
+LPRL+ E + GQ + + E+ + P+R ++ + A+V +M GCNN C++
Sbjct: 111 TYNRHELPRLILEAERGQ--VVAVSPEEQEIVEGLPIR-RESRLRAWVPIMFGCNNFCTY 167
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
CIVP+ RG+ERSR E I++EV EL KEG +E+ LLGQNVN+Y G++ V
Sbjct: 168 CIVPYVRGKERSRRPEDILREVKELAKEGYREIFLLGQNVNAYG--KGLQPPVT------ 219
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
FADLL +L+ R RYT+ HP+DF ++L+ + + P VC+
Sbjct: 220 -----------------FADLLRQLNAVEGIWRIRYTTSHPRDFGEDLIRAVAELPKVCE 262
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
HLP Q G+ +L RM RGYTR+ YL+LV++IR+++P S+D + GF GETEE+
Sbjct: 263 NFHLPVQAGSDKILRRMGRGYTRQDYLNLVRRIREVLPQASFSTDIMVGFPGETEEDFEQ 322
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL L++ VG+D A++F Y+ R T A ++ D VP EVK R+ L+ + + + +
Sbjct: 323 TLLLVREVGFDQAFIFIYNPRPGTPAA-SFPDQVPHEVKVERIKRLLALQQAISRERNRA 381
Query: 491 QVGTVQLVLVEGPNKKAPD 509
+VG V VLVEGP++ PD
Sbjct: 382 EVGKVHEVLVEGPSRTNPD 400
>gi|333923603|ref|YP_004497183.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|333749164|gb|AEF94271.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 459
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 257/458 (56%), Gaps = 48/458 (10%)
Query: 72 EVHSQGRIYQE--TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYA 129
E+ S+G+ + T+GCQMN D E + ++++ GY E A++I +NTC +R+ A
Sbjct: 11 EIKSEGQKFYHVITFGCQMNERDSESLAGMLEDMGYLPT-ESREEADIIILNTCCVRETA 69
Query: 130 EHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVD 186
E KV F L R + VA P I+ V GCM+ E + KI + VD
Sbjct: 70 ESKV------FGLLGRLRQLKVA-------KPDLIIGVAGCMSQQEEVAKKIRHSFPFVD 116
Query: 187 VVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNN 246
++ G +LPR++++V Q+ + + + E+ A+ PVR K+ + A+V++M GCNN
Sbjct: 117 IIFGTHNIHELPRMIQQVRENQEAVLEVWATEKGIAENVPVR-RKDKLKAWVTIMYGCNN 175
Query: 247 MCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPG 306
C++CIVP+ RGRERSR E+I++E+ L +G KEVTLLGQNVNSY
Sbjct: 176 FCTYCIVPYVRGRERSRNPENIIEEIKGLVAQGYKEVTLLGQNVNSYG------------ 223
Query: 307 ANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRP 366
K +M RFADLL L R R+ + HP+DF L+ I+
Sbjct: 224 -------------KDLQMDYRFADLLLDLDKITGLKRIRFMTSHPRDFDQRLIDIIASTN 270
Query: 367 NVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEE 426
VC++ HLPAQ G++ +L+ M RGYTRE YL L+ IR+ IP ++SD + GF GETEE
Sbjct: 271 KVCEHFHLPAQAGSNRILKLMNRGYTREHYLQLIDNIRKAIPGASITSDIMVGFPGETEE 330
Query: 427 EHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQ 486
+ ADTL L++ V YD A+ F Y++R T A + ++ VPEEVK R+ +LI+ + + +
Sbjct: 331 DFADTLDLVRRVRYDSAFTFVYNIRSGTPAAK--MEQVPEEVKSARIQKLIDLQNQISLE 388
Query: 487 CYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G V VLVEG K PD +L G+S V F
Sbjct: 389 NNRQEEGKVLEVLVEGETKTNPD-KLAGRSRTNKLVVF 425
>gi|312111583|ref|YP_003989899.1| MiaB family RNA modification protein [Geobacillus sp. Y4.1MC1]
gi|336235965|ref|YP_004588581.1| MiaB family RNA modification protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|423720511|ref|ZP_17694693.1| RNA modification protein, miaB family [Geobacillus
thermoglucosidans TNO-09.020]
gi|311216684|gb|ADP75288.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1]
gi|335362820|gb|AEH48500.1| RNA modification enzyme, MiaB family [Geobacillus
thermoglucosidasius C56-YS93]
gi|383366566|gb|EID43856.1| RNA modification protein, miaB family [Geobacillus
thermoglucosidans TNO-09.020]
Length = 523
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 256/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE+A VI +NTCAIR+ AE+KV+ +
Sbjct: 81 KFYIRTYGCQMNEHDTEVMAGIFMELGY-EPTDRPEDANVILLNTCAIRENAENKVFGEI 139
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LK++ +P ++ V GCM+ E + +KIL + VD++ G
Sbjct: 140 GHLKQLKQD-------------NPDLLLGVCGCMSQEESVVNKILKQYQYVDMIFGTHNI 186
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L E ++ + + S E + P + K ++ A+V++M GC+ C++CIVP
Sbjct: 187 HRLPHILHEAYMSKEMVVEVWSKEGDVIENLP-KARKGNIKAWVNIMYGCDKFCTYCIVP 245
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++EV L +G KEVTLLGQNVN+Y +
Sbjct: 246 YTRGKERSRRPEDIIQEVRHLAAQGYKEVTLLGQNVNAY------------------GKD 287
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F M K GL DL+D L + R R+T+ HP+DF D L+ ++ R N+ ++IHL
Sbjct: 288 FTDM----KYGL--GDLMDELR-KIDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHL 340
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE YL+LV+KI+ IPDV L++D I GF ETEE+ +TL+L
Sbjct: 341 PVQSGSTEILKLMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETEEQFEETLSL 400
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A + VD+VP EVK+ RL L E + + G
Sbjct: 401 YREVEFDSAYTFIYSPREGTPAAK-MVDNVPMEVKKERLHRLNALVNEISARKMKEYEGK 459
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K PD L G + + V F
Sbjct: 460 VVEVLVEGESKNNPDV-LAGYTRKNKLVNF 488
>gi|239826699|ref|YP_002949323.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacillus
sp. WCH70]
gi|239806992|gb|ACS24057.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. WCH70]
Length = 523
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 176/450 (39%), Positives = 256/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE+A VI +NTCAIR+ AE+KV+ +
Sbjct: 81 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDRPEDANVILLNTCAIRENAENKVFGEI 139
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK Q+ + V GCM+ E + +KIL + VD++ G
Sbjct: 140 GHLKPLK------------QNNPDLLLGVCGCMSQEESVVNKILKQYQYVDMIFGTHNIH 187
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L E ++ + + S E + P + + ++ A+V++M GC+ C++CIVP+
Sbjct: 188 RLPYILHEAYMSKEMVVEVWSKEGDVIENLP-KARRGNIKAWVNIMYGCDKFCTYCIVPY 246
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV L +G KE+TLLGQNVN+Y + F
Sbjct: 247 TRGKERSRRPEDIIQEVRHLAAQGYKEITLLGQNVNAY------------------GKDF 288
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M K GL DL+D L ++ P R R+T+ HP+DF D L+ ++ R N+ ++IHL
Sbjct: 289 TDM----KYGL--GDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHL 340
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE YL+LV+KI++ IPDV L++D I GF ETEE+ +TL+L
Sbjct: 341 PVQSGSTEILKLMGRKYTREEYLELVRKIKEAIPDVALTTDIIVGFPNETEEQFEETLSL 400
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A + VD+VP EVK+ RL L E + + G
Sbjct: 401 YREVEFDSAYTFIYSPREGTPAAK-MVDNVPMEVKKERLQRLNALVNEISARKMKEYEGK 459
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K PD L G + + V F
Sbjct: 460 VVEVLVEGESKNNPDV-LAGYTRKNKLVNF 488
>gi|118443818|ref|YP_878177.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
novyi NT]
gi|229890490|sp|A0Q0M5.1|MIAB_CLONN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|118134274|gb|ABK61318.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium novyi NT]
Length = 452
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R + T+GCQMN D E + ++K GY+ ++ + A+V+ NTC +R+ AE KV+ L
Sbjct: 17 RFFISTWGCQMNEEDSEKISGLLKGIGYTRT-DIRDEADVVIFNTCCVRENAEQKVYGHL 75
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKI-VVLGCMAER--LKDKILDADKMVDVVCGPDAY 194
LKR K+P I +V GCM ++ + +K+++ VD++ G
Sbjct: 76 GELKALKR-------------KNPNLILIVTGCMMQQKGMPEKVMEKFPHVDIIAGTYNS 122
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +E V I + E+ + PV K+ + AFV++M GCNN CS+CIVP
Sbjct: 123 YKLPEYIERVKTEGNSIIEIWDKEKGIVEGLPVD-RKSDIKAFVTIMYGCNNFCSYCIVP 181
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+ RGRERSR ++I+ E+ +L +G KE+TLLGQNVNSY G+E E+
Sbjct: 182 YVRGRERSRDPQNIIDEIKDLVSKGYKEITLLGQNVNSYG--KGLEPEI----------N 229
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F ++ LR + +D L R R+ + HPKD DEL+ M + VC+ H
Sbjct: 230 FATL-------LRMVNKIDGLE------RIRFMTSHPKDVSDELIKAMAECEKVCEQGHF 276
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
Q+G++ +L++M R YTRE YL LV+K+R+ +P+VG+S+D I G+ GETE++ DTL++
Sbjct: 277 ALQSGSTEILQKMNRKYTREDYLTLVKKLRKAMPNVGISTDIIIGYPGETEKDFEDTLSI 336
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+K + +D A+ F YS RE T A + D VPE+VK R +L+EA E + G
Sbjct: 337 VKEIEFDSAFTFIYSKREGTPAAK-LEDQVPEDVKHTRFNKLVEAVNEIMARKNKEFEGK 395
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+K DT+L+G++ G V F
Sbjct: 396 TVEVLVEGPSKN-DDTKLMGRTRSGKLVNF 424
>gi|196247551|ref|ZP_03146253.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. G11MC16]
gi|229890686|sp|A4IMH7.2|MIAB_GEOTN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|196212335|gb|EDY07092.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. G11MC16]
Length = 523
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 257/450 (57%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE+A VI +NTCAIR+ AE+KV+ L
Sbjct: 81 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDRPEDANVILLNTCAIRENAENKVFGEL 139
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
Y LK + +P ++ V GCM+ E + +KIL + VD++ G
Sbjct: 140 GYLKPLK-------------TTNPDLLLGVCGCMSQEEAVVNKILKQYQYVDLIFGTHNI 186
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L E ++ + + S E + P ++ K ++ A+V++M GC+ C++CIVP
Sbjct: 187 HRLPYILHEAYMSKEMVVEVWSKEGDVVENLP-KVRKGNIKAWVNIMYGCDKFCTYCIVP 245
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++EV +L +G KE+TLLGQNVN+Y +
Sbjct: 246 YTRGKERSRRPEDIIQEVRQLAAQGYKEITLLGQNVNAY------------------GKD 287
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FN + + GL DL+D L + R R+T+ HP+DF D L+ ++ R N+ ++IHL
Sbjct: 288 FNDI----QYGL--GDLMDELR-KIDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHL 340
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE YL+LV+KI+ IPDV L++D I GF ET+E+ +TL+L
Sbjct: 341 PVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETDEQFEETLSL 400
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A + D+VP EVK+ RL L +E + G
Sbjct: 401 YREVEFDSAYTFIYSPREGTPAAK-MNDNVPMEVKKERLQRLNALVQEIAAKKMKQYEGQ 459
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K PD L G + + V F
Sbjct: 460 VVEVLVEGESKTNPDV-LAGYTRKNKLVHF 488
>gi|325266776|ref|ZP_08133449.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Kingella denitrificans
ATCC 33394]
gi|324981778|gb|EGC17417.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Kingella denitrificans
ATCC 33394]
Length = 441
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 166/435 (38%), Positives = 246/435 (56%), Gaps = 42/435 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +L+++ + G E +N P+ A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLAVLAEEHGGIEQVNEPDGADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK++ NV G V GC+A + + I++ VDVV GP
Sbjct: 63 LGRVKHLKKD-NPNVIIG-----------VAGCVASQEGEAIIERAPYVDVVFGPQTLHR 110
Query: 197 LPRL-LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP++ +++ G ++ E + + P R+ S AF+S+M GC+ CSFC+VP+
Sbjct: 111 LPKMIMDKETTGLSQVDISFPEIEKFDHLPPARVEGGS--AFISIMEGCSKYCSFCVVPY 168
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 169 TRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMENG--------- 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++HL
Sbjct: 214 -EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFSDAIIECYRDLPKLVSHLHL 264
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL L
Sbjct: 265 PIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKL 324
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+K + +D++++F YS R T A N DD P E K RRL L E T + + +GT
Sbjct: 325 VKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTMLGT 383
Query: 495 VQLVLVEGPNKKAPD 509
VQ LVEG +KK PD
Sbjct: 384 VQRCLVEGVSKKDPD 398
>gi|168186342|ref|ZP_02620977.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum C
str. Eklund]
gi|169295705|gb|EDS77838.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum C
str. Eklund]
Length = 447
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 173/451 (38%), Positives = 256/451 (56%), Gaps = 47/451 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R + T+GCQMN D E + ++K GY+ ++ + A+V+ NTC +R+ AE KV+ L
Sbjct: 12 RFFISTWGCQMNEEDSEKISGLLKGIGYTRT-DIRDEADVVIFNTCCVRENAEQKVYGHL 70
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKI-VVLGCMAER--LKDKILDADKMVDVVCGPDAY 194
LKR K+P I +V GCM ++ + +K+++ VD++ G
Sbjct: 71 GELKALKR-------------KNPNLILIVTGCMMQQKGMPEKVMEKFPHVDIIAGTYNS 117
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +E V I + E+ + PV K+ + AFV++M GCNN CS+CIVP
Sbjct: 118 YKLPEYIERVKTEGNSIIEIWDKEKGIVEGLPVD-RKSDIKAFVTIMYGCNNFCSYCIVP 176
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+ RGRERSR ++I+ E+ +L +G KE+TLLGQNVNSY G+E E+
Sbjct: 177 YVRGRERSRDPKNIIDEIKDLVSKGYKEITLLGQNVNSYG--KGLEPEIS---------- 224
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FADLL ++ R R+ + HPKD DEL+ M + VC+ H
Sbjct: 225 -------------FADLLRMVNKIDGLERIRFMTSHPKDVSDELIEAMAECDKVCEQGHF 271
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
Q+G++ VLE+M R YTRE YL LV+K+R+ +P+VG+S+D I G+ GETE++ DTL++
Sbjct: 272 ALQSGSTEVLEKMNRKYTREDYLTLVKKLRKTMPNVGISTDIIIGYPGETEKDFEDTLSI 331
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG-QCYDSQVG 493
+K + +D A+ F YS RE T A + D VPE+VK R +L+EA E + D +
Sbjct: 332 VKEIEFDSAFTFIYSKREGTPAAK-LEDQVPEDVKHTRFNKLVEAVNEIMARKNKDFEEK 390
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
TV+ VLVEGP+K DT+L+G++ G V F
Sbjct: 391 TVE-VLVEGPSKN-DDTKLMGRTRSGKLVNF 419
>gi|323703565|ref|ZP_08115210.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfotomaculum
nigrificans DSM 574]
gi|323531468|gb|EGB21362.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfotomaculum
nigrificans DSM 574]
Length = 459
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 175/458 (38%), Positives = 257/458 (56%), Gaps = 48/458 (10%)
Query: 72 EVHSQGRIYQE--TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYA 129
E+ S+G+ + T+GCQMN D E + ++++ GY E A++I +NTC +R+ A
Sbjct: 11 EIKSEGQKFYHVITFGCQMNERDSESLAGMLEDMGYLPT-ESREEADIIILNTCCVRETA 69
Query: 130 EHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVD 186
E KV F L R + VA P I+ V GCM+ E + KI + VD
Sbjct: 70 ESKV------FGLLGRLRQLKVA-------KPDLIIGVAGCMSQQEEVAKKIRHSFPFVD 116
Query: 187 VVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNN 246
++ G +LPR++++V Q+ + + + E+ A+ PVR K+ + A+V++M GCNN
Sbjct: 117 IIFGTHNIHELPRMIQQVRENQEAVLEVWATEKGIAENVPVR-RKDKLKAWVTIMYGCNN 175
Query: 247 MCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPG 306
C++CIVP+ RGRERSR E+I++E+ L +G KEVTLLGQNVNSY
Sbjct: 176 FCTYCIVPYVRGRERSRNPENIIEEIKGLVAQGYKEVTLLGQNVNSYG------------ 223
Query: 307 ANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRP 366
K +M RFADLL L R R+ + HP+DF L+ ++
Sbjct: 224 -------------KDLQMDYRFADLLLDLDKITGLKRIRFMTSHPRDFDQRLIDVIASTN 270
Query: 367 NVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEE 426
VC++ HLPAQ G++ +L+ M RGYTRE YL L+ IR+ IP ++SD + GF GETEE
Sbjct: 271 KVCEHFHLPAQAGSNRILKLMNRGYTREHYLQLIDNIRKAIPGASITSDIMVGFPGETEE 330
Query: 427 EHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQ 486
+ ADTL L++ V YD A+ F Y++R T A + ++ VPEEVK R+ +LI+ + + +
Sbjct: 331 DFADTLDLVRRVRYDSAFTFVYNIRSGTPAAK--MEQVPEEVKSARIQKLIDLQNQISLE 388
Query: 487 CYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G V VLVEG K PD +L G+S V F
Sbjct: 389 NNRQEEGKVLEVLVEGETKTNPD-KLAGRSRTNKLVVF 425
>gi|392957597|ref|ZP_10323120.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
macauensis ZFHKF-1]
gi|391876560|gb|EIT85157.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
macauensis ZFHKF-1]
Length = 506
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 176/450 (39%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY +V E A VI +NTCAIR+ AE+KV+ L
Sbjct: 62 KFYIRTYGCQMNEHDTEVMAGIFTEMGYEPTTDVQE-ANVILLNTCAIRENAENKVFGEL 120
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK E K ++ G V GCM+ E + KIL VD++ G
Sbjct: 121 GHLKPLKLE-KPDLLIG-----------VCGCMSQEESVVTKILQTYDQVDMIFGTHNIH 168
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP++++E ++ + + S E + P R+ K ++ +V++M GC+ C++CIVP+
Sbjct: 169 RLPQIIKEAYLSKEMVVEVWSKEGDIVENLP-RVRKGNIQGWVNIMYGCDKFCTYCIVPY 227
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV L + G +EVTLLGQNVN+Y + F
Sbjct: 228 TRGKERSRRPEDIIEEVRHLARNGYQEVTLLGQNVNAY------------------GKDF 269
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M + GL DL+D + ++ P R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 270 EDM----EYGL--GDLMDEMRKIDIP--RVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHL 321
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q GNS +L+ M R YTRE Y++LV KI+Q IP L++D I GF ETEE+ +TL+L
Sbjct: 322 PVQHGNSEILKLMARKYTREHYMELVGKIKQAIPHAALTTDIIVGFPNETEEQFEETLSL 381
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+K V YD AY F YS RE T A + +D+VP EVK+ RL L E + ++ + +
Sbjct: 382 VKEVQYDAAYTFIYSPREGTPAAK-MIDNVPLEVKKERLQRLNATLNEISLSKNEAYIDS 440
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +KK PD L G + V F
Sbjct: 441 VVEVLVEGESKKNPDV-LTGHTSSNKVVNF 469
>gi|340354922|ref|ZP_08677618.1| tRNA-I(6)A37 modification enzyme MiaB [Sporosarcina newyorkensis
2681]
gi|339622936|gb|EGQ27447.1| tRNA-I(6)A37 modification enzyme MiaB [Sporosarcina newyorkensis
2681]
Length = 515
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 257/454 (56%), Gaps = 46/454 (10%)
Query: 75 SQGR-IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
QGR Y TYGCQMN +D E++ I GY E + ++A+VI +NTCAIR+ AE+KV
Sbjct: 66 GQGRKFYIRTYGCQMNEHDTEVMAGIFMALGY-EATDTVKDADVILLNTCAIRENAENKV 124
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ L + LK E + ++ G V GCM+ E + +KIL VD++ G
Sbjct: 125 FGELGHLKPLKLE-RPDLLIG-----------VCGCMSQEESVVNKILKTYDQVDMIFGT 172
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +L E ++ + + S E + P ++ + A+V++M GC+ C++C
Sbjct: 173 HNIHRLPHILHEAYMSKEMVIEVWSKEGDVIENLP-KVRHGKIKAWVNIMYGCDKFCTYC 231
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVP+TRG+ERSR E I++EV +L EG KE+TLLGQNVN+Y
Sbjct: 232 IVPYTRGKERSRRPEDIIQEVRQLAAEGYKEITLLGQNVNAY------------------ 273
Query: 312 SEGFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ F+ + R DL+D L ++ P R R+T+ HP+DF D L+ ++ N+
Sbjct: 274 GKDFDDIT------YRLGDLMDDLRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLVD 325
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+G+S +L+ M R YTRE+YL+LV KIR IP L++D I GF ET+E+ +
Sbjct: 326 HIHLPVQSGSSDMLKIMARKYTRESYLELVNKIRTAIPTASLTTDIIVGFPNETDEQFEE 385
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
T++L + VG+DMA+ + YS RE T A + D+VP EVK+ RL L + + + +
Sbjct: 386 TMSLYREVGFDMAFTYIYSAREGTPAAK-MQDNVPMEVKKERLQRLNKLVNDMSAEAMKP 444
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +KK PD L G +++ V F
Sbjct: 445 YKGQVVKVLVEGESKKNPDV-LAGYTEKSKLVNF 477
>gi|291279773|ref|YP_003496608.1| tRNA-i(6)A37 thiotransferase enzyme [Deferribacter desulfuricans
SSM1]
gi|290754475|dbj|BAI80852.1| tRNA-i(6)A37 thiotransferase enzyme [Deferribacter desulfuricans
SSM1]
Length = 439
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/435 (39%), Positives = 245/435 (56%), Gaps = 48/435 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV---W 134
+++ +T+GCQMN D E + +I + GYS N+ E A INTC++R+ HKV
Sbjct: 2 KLFIKTFGCQMNEYDSERIAAIFQERGYSLTDNL-EEASFAVINTCSVREKPYHKVESEL 60
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
RL F L ++K I V GC+A++ +K LD VD+V G A
Sbjct: 61 GRLKKFKKLNPDFK---------------IAVCGCVAQQDGEKFLDRFDYVDLVFGTSAI 105
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
L L++ V+ G++ +T +E PV V+AFV++M+GC+N CS+CIVP
Sbjct: 106 DRLHSLIDLVEKGERICDTSEGDDELSI---PVFGRGKKVSAFVTIMKGCDNFCSYCIVP 162
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+ RGRE+SR I+ E+ L GVKEVTLLGQNVNSY G+++++
Sbjct: 163 YVRGREKSRKPSEILDEIKYLVNNGVKEVTLLGQNVNSYG--KGLDEDI----------- 209
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F LL ++ R R+ + HPKDF DEL++ +RD P VC+Y+HL
Sbjct: 210 ------------NFPKLLYKVHDINGLERIRFVTSHPKDFDDELIFAIRDLPKVCEYLHL 257
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G++ VL+ M R YT E Y D V K +++IPD+ LSSDFI GF GET E+ A+TL
Sbjct: 258 PLQAGSNKVLKMMNRKYTYEEYRDKVLKAKEMIPDLALSSDFIVGFPGETVEDFAETLKA 317
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+K + Y+ + F YS R +T A N+VDD+ ++ K RRL EL+ + T + S VG
Sbjct: 318 IKEIRYESIFAFKYSPRPKTKAS-NFVDDITDDEKSRRLNELLSIQSKITEEINKSYVGK 376
Query: 495 VQLVLVEGPNKKAPD 509
VQ +LVEG +KK +
Sbjct: 377 VQEILVEGKSKKGEN 391
>gi|138894823|ref|YP_001125276.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacillus
thermodenitrificans NG80-2]
gi|134266336|gb|ABO66531.1| tRNA 2-methylthioadenosine synthase [Geobacillus
thermodenitrificans NG80-2]
Length = 580
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 257/450 (57%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE+A VI +NTCAIR+ AE+KV+ L
Sbjct: 138 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDRPEDANVILLNTCAIRENAENKVFGEL 196
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
Y LK + +P ++ V GCM+ E + +KIL + VD++ G
Sbjct: 197 GYLKPLK-------------TTNPDLLLGVCGCMSQEEAVVNKILKQYQYVDLIFGTHNI 243
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L E ++ + + S E + P ++ K ++ A+V++M GC+ C++CIVP
Sbjct: 244 HRLPYILHEAYMSKEMVVEVWSKEGDVVENLP-KVRKGNIKAWVNIMYGCDKFCTYCIVP 302
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++EV +L +G KE+TLLGQNVN+Y +
Sbjct: 303 YTRGKERSRRPEDIIQEVRQLAAQGYKEITLLGQNVNAY------------------GKD 344
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FN + + GL DL+D L + R R+T+ HP+DF D L+ ++ R N+ ++IHL
Sbjct: 345 FNDI----QYGL--GDLMDELR-KIDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHL 397
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE YL+LV+KI+ IPDV L++D I GF ET+E+ +TL+L
Sbjct: 398 PVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETDEQFEETLSL 457
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A + D+VP EVK+ RL L +E + G
Sbjct: 458 YREVEFDSAYTFIYSPREGTPAAK-MNDNVPMEVKKERLQRLNALVQEIAAKKMKQYEGQ 516
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K PD L G + + V F
Sbjct: 517 VVEVLVEGESKTNPDV-LAGYTRKNKLVHF 545
>gi|239636980|ref|ZP_04677974.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus warneri
L37603]
gi|239597330|gb|EEQ79833.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus warneri
L37603]
Length = 514
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 259/447 (57%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GYS ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVMAGILEALGYSATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLP 198
LK+E P ++ V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHRLP 178
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LEE + + + S E + P ++ + A+V++M GC+ C++CIVPFTRG
Sbjct: 179 EILEEAYLSKAMVVEVWSKEGDVIENLP-KVRDGHIKAWVNIMYGCDKFCTYCIVPFTRG 237
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
+ERSR E I+ EV EL +EG +E+TLLGQNVNSY K++E G ++ L
Sbjct: 238 KERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYG------KDIE-GLDYGL------- 283
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL+ +S ++ P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 284 ----------GDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV +I++ IP++ L++D I G+ ETEE+ DTLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVSRIKEAIPNIALTTDIIVGYPNETEEQFEDTLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP EVK+ RL L + E + + +
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPTEVKKERLQRLNKKVGEYSQKAMSQYENEIVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D+ L G + + V F
Sbjct: 451 VLCEGSSKK-DDSVLAGYTSKNKLVNF 476
>gi|417642888|ref|ZP_12292968.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus warneri
VCU121]
gi|445059788|ref|YP_007385192.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
warneri SG1]
gi|330686356|gb|EGG97959.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU121]
gi|443425845|gb|AGC90748.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
warneri SG1]
Length = 514
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 259/447 (57%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GYS ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVMAGILEALGYSATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLP 198
LK+E P ++ V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHRLP 178
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LEE + + + S E + P ++ + A+V++M GC+ C++CIVPFTRG
Sbjct: 179 EILEEAYLSKAMVVEVWSKEGDVIENLP-KVRDGHIKAWVNIMYGCDKFCTYCIVPFTRG 237
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
+ERSR E I+ EV EL +EG +E+TLLGQNVNSY K++E G ++ L
Sbjct: 238 KERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYG------KDIE-GLDYGL------- 283
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL+ +S ++ P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 284 ----------GDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV +I++ IP++ L++D I G+ ETEE+ DTLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVSRIKEAIPNIALTTDIIVGYPNETEEQFEDTLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + E + + +
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPTDVKKERLQRLNKKVGEYSQKAMSQYENEIVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK DT L G + + V F
Sbjct: 451 VLCEGSSKK-DDTVLAGYTSKNKLVNF 476
>gi|307718683|ref|YP_003874215.1| hypothetical protein STHERM_c09960 [Spirochaeta thermophila DSM
6192]
gi|306532408|gb|ADN01942.1| hypothetical protein STHERM_c09960 [Spirochaeta thermophila DSM
6192]
Length = 448
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 256/446 (57%), Gaps = 41/446 (9%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGCQMN + E ++ ++ AG+ + P+ A+V+ +NTCA+R AE ++ RL Y
Sbjct: 5 WVETYGCQMNKAESEALIRDLEEAGWGRA-SAPDEADVVVLNTCAVRQTAEERIAGRLGY 63
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
+ +LK+ GR +V++GCMAER+K+++L+A VDVV G + R
Sbjct: 64 YRYLKKH-------GRFV------LVLMGCMAERMKEEVLEAFPHVDVVVGTFQKKSFVR 110
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL E + LL EE + S AFV +M GCNN CS+CIVP+ RGR
Sbjct: 111 LLRERAEDLTLLQQLLLTEEDEYSFEKIHHSGPGFKAFVPIMHGCNNFCSYCIVPYVRGR 170
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
E SR I +E++ L ++GVKE+TLLGQNVNSY T W E
Sbjct: 171 EVSRHPSEIFEEIEALLEKGVKEITLLGQNVNSYRFT------------WEGKE------ 212
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRF-RYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
+RFA LL + FPE+ + R+ + HPKD DEL+ +M P++CK++HLP Q
Sbjct: 213 ------VRFAGLLREIVHRFPELPWLRFLTSHPKDLSDELIEVMSASPSICKHLHLPVQH 266
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ +L M R YTRE YL+LV++IR +P + L++D + GF GETEE+ TL LM+ V
Sbjct: 267 GSNRILGAMNRRYTREHYLNLVERIRTAMPGIALTTDILVGFPGETEEDLELTLDLMRRV 326
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
+ AY + Y+ R+ T A+ + D +P EVK+ RL +I RE + + ++G + V
Sbjct: 327 RFADAYTYYYNPRKGTRAY-EWGDPIPLEVKKERLDRVIRLQRELSLEWKQMRIGRMVDV 385
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVE ++K D E++ ++++ V F
Sbjct: 386 LVEEVSRKRED-EVLARTEQDEMVVF 410
>gi|404378460|ref|ZP_10983552.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Simonsiella muelleri ATCC 29453]
gi|294483587|gb|EFG31271.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Simonsiella muelleri ATCC 29453]
Length = 441
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/435 (37%), Positives = 246/435 (56%), Gaps = 42/435 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +L+++ + G E IN P+ A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLAVLAEEHGDIEQINEPDGADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK+E N+ G V GC+A + + I++ VDVV GP
Sbjct: 63 LGRVKHLKKE-NPNLIIG-----------VAGCVASQEGEAIIERAPYVDVVFGPQTLHR 110
Query: 197 LPRL-LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP++ +++ G ++ E + + P R+ S AF+S+M GC+ CSFC+VP+
Sbjct: 111 LPKMIMDKETTGLSQVDISFPEIEKFDHLPPARVEGGS--AFISIMEGCSKYCSFCVVPY 168
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 169 TRGEEFSRPLNDVLTEIAHLAQQGVKEINLLGQNVNAYRG------EMDNG--------- 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++HL
Sbjct: 214 -EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFSDAIIECYRDLPKLVSHLHL 264
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL L
Sbjct: 265 PIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKL 324
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+K + +D++++F YS R T A N DD P E K RRL L E T + + +GT
Sbjct: 325 VKDIAFDLSFVFIYSPRPGTPA-ANLPDDTPHEEKVRRLEALNEVIEAETARINQAMLGT 383
Query: 495 VQLVLVEGPNKKAPD 509
+Q LVEG +KK PD
Sbjct: 384 IQRCLVEGVSKKDPD 398
>gi|56419838|ref|YP_147156.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacillus
kaustophilus HTA426]
gi|375008279|ref|YP_004981912.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Geobacillus thermoleovorans CCB_US3_UF5]
gi|81347575|sp|Q5L0E8.1|MIAB_GEOKA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|56379680|dbj|BAD75588.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|359287128|gb|AEV18812.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Geobacillus thermoleovorans CCB_US3_UF5]
Length = 531
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE A VI +NTCAIR+ AE+KV+ L
Sbjct: 81 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDRPEEANVILLNTCAIRENAENKVFGEL 139
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
Y LK + +P ++ V GCM+ E + KIL + VD++ G
Sbjct: 140 GYLKPLK-------------TTNPDLLLGVCGCMSQEESVVKKILKQYQYVDLIFGTHNI 186
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L E ++ + + S E + P ++ K + A+V++M GC+ C++CIVP
Sbjct: 187 HRLPYILHEAYMSKEMVVEVWSKEGDVVENLP-KVRKGKIKAWVNIMYGCDKFCTYCIVP 245
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++EV +L +G KE+TLLGQNVN+Y +
Sbjct: 246 YTRGKERSRRPEDIIQEVRQLAAQGYKEITLLGQNVNAY------------------GKD 287
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F + + GL DL+D L + R R+T+ HP+DF D L+ ++ R N+ ++IHL
Sbjct: 288 FTDI----QYGL--GDLMDELR-KIDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHL 340
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE YL+LV+KI+ IPDV L++D I GF ET+E+ +TL+L
Sbjct: 341 PVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETDEQFEETLSL 400
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A N D+VP EVK+ RL L + +E + G
Sbjct: 401 YREVEFDSAYTFIYSPREGTPAA-NMKDNVPMEVKKERLKRLNDLVQEIAAKKMKQYEGQ 459
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K PD L G + + V F
Sbjct: 460 VVEVLVEGESKTNPDV-LAGYTRKNKLVHF 488
>gi|297530521|ref|YP_003671796.1| tRNA-i(6)A37 thiotransferase protein MiaB [Geobacillus sp. C56-T3]
gi|448237459|ref|YP_007401517.1| tRNA-i(6)A37 modification enzyme [Geobacillus sp. GHH01]
gi|297253773|gb|ADI27219.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. C56-T3]
gi|445206301|gb|AGE21766.1| tRNA-i(6)A37 modification enzyme [Geobacillus sp. GHH01]
Length = 531
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/463 (38%), Positives = 257/463 (55%), Gaps = 48/463 (10%)
Query: 68 ATGSEVHSQGR---IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCA 124
A E GR Y TYGCQMN +D E++ I GY E + PE A VI +NTCA
Sbjct: 68 AIPEEFRGMGRGRKFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDRPEEANVILLNTCA 126
Query: 125 IRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDA 181
IR+ AE+KV+ L Y LK + +P ++ V GCM+ E + KIL
Sbjct: 127 IRENAENKVFGELGYLKPLK-------------TTNPDLLLGVCGCMSQEESVVKKILKQ 173
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD++ G LP +L E ++ + + S E + P ++ K + A+V++M
Sbjct: 174 YQYVDLIFGTHNIHRLPYILHEAYMSKEMVVEVWSKEGDVVENLP-KVRKGKIKAWVNIM 232
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
GC+ C++CIVP+TRG+ERSR E I++EV +L +G KE+TLLGQNVN+Y
Sbjct: 233 YGCDKFCTYCIVPYTRGKERSRRPEDIIQEVRQLAAQGYKEITLLGQNVNAY-------- 284
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
+ F + + GL DL+D L + R R+T+ HP+DF D L+ +
Sbjct: 285 ----------GKDFTDI----QYGL--GDLMDELR-KIDIARIRFTTSHPRDFDDRLIEV 327
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ R N+ ++IHLP Q+G++ +L+ M R YTRE YL+LV+KI+ IPDV L++D I GF
Sbjct: 328 LAKRGNLVEHIHLPVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFP 387
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ET+E+ +TL+L + V +D AY F YS RE T A N D+VP EVK+ RL L + +
Sbjct: 388 NETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAA-NMKDNVPMEVKKERLKRLNDLVQ 446
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
E + G V VLVEG +K PD L G + + V F
Sbjct: 447 EIAAKKMKQYEGQVVEVLVEGESKTNPDV-LAGYTRKNKLVHF 488
>gi|333374559|ref|ZP_08466399.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Kingella kingae ATCC
23330]
gi|332975197|gb|EGK12097.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Kingella kingae ATCC
23330]
Length = 440
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/437 (38%), Positives = 248/437 (56%), Gaps = 46/437 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +L+++ + G E + PE A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLAVLAEEHGGIEQVAEPEGADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK++ + + I V GC+A + + I++ VDVV GP
Sbjct: 63 LGRVKHLKKDNPQLI------------IGVAGCVASQEGEAIIERAPYVDVVFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP+++ VD G++ + +S E + + P R+ S AF+S+M GC+ CSFC+V
Sbjct: 111 LPKMI--VDKETTGLSQVDISFPEIEKFDHLPPARVEGGS--AFISIMEGCSKYCSFCVV 166
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 167 PYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDNG------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++
Sbjct: 214 ---EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFSDAIIECYRDLPKLVSHL 262
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL
Sbjct: 263 HLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTL 322
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L+K + +D++++F YS R T A N DD P E K RRL L E T Q S +
Sbjct: 323 KLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETAQINQSML 381
Query: 493 GTVQLVLVEGPNKKAPD 509
GT+Q LVEG +KK PD
Sbjct: 382 GTIQRCLVEGVSKKDPD 398
>gi|390957754|ref|YP_006421511.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Terriglobus roseus DSM 18391]
gi|390412672|gb|AFL88176.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Terriglobus roseus DSM 18391]
Length = 444
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/447 (36%), Positives = 244/447 (54%), Gaps = 45/447 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
Y ET+GCQMN +D E V+ +++ GY V + E AE+I NTC+IRD AE KV+ RLN
Sbjct: 8 FYMETFGCQMNAHDSEKVIGTLEHEGYVRVQD-EEAAELILYNTCSIRDKAEQKVFHRLN 66
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
E+K+ G+ + VLGC+A++ +KI + V +V G +YR+LP
Sbjct: 67 -------EYKRMQGEGK-------QFAVLGCVAQQEGEKIFEKAPFVSLVSGSASYRNLP 112
Query: 199 RLLEEVDYGQKGINTLLSLEETYADI-SPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
+L ++ G+K I L A + N +++++ GC+ CS+C+VP+TR
Sbjct: 113 EMLVRLEAGEKRITGLDDRRTQDATFDTEFTTRSNPHRGYITIIEGCDKFCSYCVVPYTR 172
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G+ERSR +SI+ E + G ++ LLGQNVNSY D G
Sbjct: 173 GKERSRASDSIMAEAQRMASLGYTDIQLLGQNVNSYRDPLGQRT---------------- 216
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
FA +L+ + + R R+T+ HP+DF +++ ++ P VC ++HLP Q
Sbjct: 217 ----------FAQVLESIGVLHGVRRVRFTTSHPRDFTPDIIEVIDRMPTVCDHVHLPVQ 266
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+SAVL+ M+R YTRE YL+ + I+ D+ +++D I GF GETEE+ T++L+
Sbjct: 267 SGSSAVLKAMQREYTREWYLERIGWIKAAKRDISMTTDIIVGFPGETEEDFEMTMSLLDE 326
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD Y F YS R T A D VP++VK RL L++A RE Y+ +G V
Sbjct: 327 VGYDAVYAFQYSQRPNTPA-VGMPDTVPDDVKSSRLQRLMDAQRERQRIAYERHMGQVMD 385
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
V+VEG N + ++ G+S + V F
Sbjct: 386 VMVEGYNSQR--GQITGRSSQNKTVNF 410
>gi|122879210|ref|YP_201405.6| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
oryzae pv. oryzae KACC 10331]
gi|229891224|sp|Q5GZ51.2|MIAB_XANOR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
Length = 484
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 244/450 (54%), Gaps = 35/450 (7%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ + E+ + PE A+V+ +NTC+IR+ A+ KV+
Sbjct: 35 RGKLYIKTHGCQMNEYDSAKMADVLAASEGLELTDNPEEADVVLVNTCSIREKAQEKVFS 94
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L WK A G+ P I V GC+A + + I+ VD+V GP
Sbjct: 95 QLG-------RWKALKAGGK-----PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 142
Query: 196 DLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L+ + G+ ++ E + + R S AFVS+M GC+ CSFC+VP
Sbjct: 143 RLPELIRARRESGKSQVDISFPEIEKFDRLPEPRAEGPS--AFVSIMEGCSKYCSFCVVP 200
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y G + +P L
Sbjct: 201 YTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAG-DPAQYADLGLL 259
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
++ +++ +G R R+T+ HP +F D L+ RD P + Y+HL
Sbjct: 260 IRTIAQIEGIG-----------------RIRFTTSHPLEFSDSLVDAYRDVPQLANYLHL 302
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GETE + T+ L
Sbjct: 303 PVQAGSDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKL 362
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG+D ++ F YS R T A + DD PE VKQ RL L S VG+
Sbjct: 363 IEDVGFDQSFSFVYSRRPGTPAS-DLQDDTPETVKQARLARLQAHISAHAASISQSMVGS 421
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLVEGP+++ P+ EL GKS+ V F
Sbjct: 422 VQRVLVEGPSRRDPN-ELTGKSENMRPVNF 450
>gi|261419508|ref|YP_003253190.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacillus
sp. Y412MC61]
gi|319766323|ref|YP_004131824.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. Y412MC52]
gi|261375965|gb|ACX78708.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. Y412MC61]
gi|317111189|gb|ADU93681.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacillus sp. Y412MC52]
Length = 531
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 177/463 (38%), Positives = 255/463 (55%), Gaps = 48/463 (10%)
Query: 68 ATGSEVHSQGR---IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCA 124
A E GR Y TYGCQMN +D E++ I GY E + PE A VI +NTCA
Sbjct: 68 AIPEEFRGMGRGRKFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDRPEEANVILLNTCA 126
Query: 125 IRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDA 181
IR+ AE+KV+ L Y LK + +P ++ V GCM+ E + KIL
Sbjct: 127 IRENAENKVFGELGYLKPLK-------------TTNPDLLLGVCGCMSQEESVVKKILKQ 173
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD++ G LP +L E ++ + + S E + P ++ K + A+V++M
Sbjct: 174 YQYVDLIFGTHNIHRLPYILHEAYMSKEMVVEVWSKEGDVVENLP-KVRKGKIKAWVNIM 232
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
GC+ C++CIVP+TRG+ERSR E I++EV +L +G KE+TLLGQNVN+Y
Sbjct: 233 YGCDKFCTYCIVPYTRGKERSRRPEDIIQEVRQLAAQGYKEITLLGQNVNAY-------- 284
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
G ++ + DL+D L + R R+T+ HP+DF D L+ +
Sbjct: 285 ----GKDF------------TDIQYSLGDLMDELR-KIDIARIRFTTSHPRDFDDRLIEV 327
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ R N+ ++IHLP Q+G++ +L+ M R YTRE YL+LV+KI+ IPDV L++D I GF
Sbjct: 328 LAKRGNLVEHIHLPVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFP 387
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ET+E+ +TL+L + V +D AY F YS RE T A N D+VP EVK+ RL L + +
Sbjct: 388 NETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAA-NMKDNVPMEVKKERLKRLNDLVQ 446
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
E + G V VLVEG +K PD L G + + V F
Sbjct: 447 EIAAKKMKQYEGQVVEVLVEGESKTNPDV-LAGYTRKNKLVHF 488
>gi|410456328|ref|ZP_11310191.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
bataviensis LMG 21833]
gi|409928242|gb|EKN65360.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
bataviensis LMG 21833]
Length = 514
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 257/449 (57%), Gaps = 43/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + E+A VI +NTCAIR+ AE+KV+ L
Sbjct: 70 KFYIRTYGCQMNEHDTEVMAGIFLALGY-EPTDRTEDANVILLNTCAIRENAENKVFGEL 128
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK E K ++ G V GCM+ E + +KIL + VD++ G
Sbjct: 129 GHLKALKLE-KPDLLIG-----------VCGCMSQEESVVNKILKTYQQVDMIFGTHNIH 176
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L E ++ + + S E + P ++ + + A+V++M GC+ C++CIVPF
Sbjct: 177 RLPNILHEAYMSKEMVVEVWSKEGDVIENLP-KVRRGKIKAWVNIMYGCDKFCTYCIVPF 235
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV +L +G +EVTLLGQNVN+Y K++E G N+ L E
Sbjct: 236 TRGKERSRRPEEIIQEVRQLAAQGYQEVTLLGQNVNAYG------KDLE-GVNYGLGELM 288
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ + K+ + P R R+T+ HP+DF D L+ ++ N+ +IHLP
Sbjct: 289 DDLRKI----------------DIP--RIRFTTSHPRDFDDRLIEVLAKGGNLMDHIHLP 330
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ VL+ M R YTRE YL+LV+KI+ IP+V L++D I G+ ET+E+ +T++L
Sbjct: 331 VQSGSTDVLKIMARKYTREQYLELVRKIKAAIPNVALTTDIIVGYPNETDEQFEETMSLY 390
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ VGY++AY F YS RE T A + D+VP EVK+ RL L E + + G +
Sbjct: 391 REVGYELAYTFIYSPREGTPAAK-MEDNVPMEVKKARLQRLNALVNELSLEAMKKHEGQI 449
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K PD L G + R V F
Sbjct: 450 LDVLVEGESKNNPDV-LAGYTSRNKLVNF 477
>gi|187779606|ref|ZP_02996079.1| hypothetical protein CLOSPO_03202 [Clostridium sporogenes ATCC
15579]
gi|187773231|gb|EDU37033.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium sporogenes
ATCC 15579]
Length = 450
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 255/456 (55%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+++ G+ + ET+GCQMN D E + ++K Y E A+VI NTC +R+ AE
Sbjct: 9 DINIIGKFFIETWGCQMNEEDSEKLSGMLKRESYIRT-EEREEADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK +K+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------AKNPNLIIAVTGCMMQQAGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + L EV + + E++ + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFSNYLNEVKKKHTSVLKIQEKEDSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ L +G KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEDEIKNLVSKGYKEITLLGQNVNSYG------KDLEPN-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLKRVNTIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSDMLKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKTVEYDSAFTFLYSIRKGTPAAK-FDDQVPEDVKHKRFNRLVEVVNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRAGKLVNF 422
>gi|387926953|ref|ZP_10129632.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
methanolicus PB1]
gi|387589097|gb|EIJ81417.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
methanolicus PB1]
Length = 514
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 255/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE+A VI +NTCAIR+ AE+KV+ +
Sbjct: 70 KFYIRTYGCQMNEHDTEVMAGIFMGLGY-EPTDKPEDANVILLNTCAIRENAENKVFGEI 128
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK E K ++ G V GCM+ E + +KIL + VD++ G
Sbjct: 129 GHLKALKME-KPDLLLG-----------VCGCMSQEELVVNKILKQYQYVDMIFGTHNIH 176
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L E ++ + + S E + P ++ + ++ A+V++M GC+ C++CIVP+
Sbjct: 177 RLPNILHEAYMSKEMVVEVWSKEGDIIENLP-KVRRGNIKAWVNIMYGCDKFCTYCIVPY 235
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV L +G KE+TLLGQNVN+Y G ++
Sbjct: 236 TRGKERSRRPEDIIQEVRHLAAQGYKEITLLGQNVNAY------------GKDF------ 277
Query: 316 NSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M R DL++ +S ++ P R R+T+ HP+DF D L+ ++ N+ +IHL
Sbjct: 278 ------TDMKYRLGDLMEEISKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLMPHIHL 329
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ VL+ M R YTRE YL+LV+KI+ IPDV L++D I G+ ETEE+ +TL+L
Sbjct: 330 PVQSGSTDVLKIMARKYTREEYLELVRKIKAAIPDVALTTDIIVGYPNETEEQFEETLSL 389
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG++ AY F YS RE T A + D+VP EVK+ RL L E + G
Sbjct: 390 YREVGFESAYTFIYSPREGTPAAK-MQDNVPMEVKKERLQRLNTLVNELSRDAMKKYQGQ 448
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +K PD L G + + V F
Sbjct: 449 IVEVLVEGESKNNPDV-LAGYTRKNKLVNF 477
>gi|261379974|ref|ZP_05984547.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria subflava
NJ9703]
gi|284797173|gb|EFC52520.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria subflava
NJ9703]
Length = 440
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 247/437 (56%), Gaps = 46/437 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +LS++ + G E + P++A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQPDDADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK E NV G V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-EKNPNVIIG-----------VAGCVASQEGENIVKRAPYVDVVFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP+L+ VD G++ + +S E + + P R+ S AF+S+M GC+ CS+C+V
Sbjct: 111 LPKLI--VDKETTGLSQIDISFPEIEKFDHLPPARVEGGS--AFISIMEGCSKYCSYCVV 166
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 167 PYTRGEEFSRPLNDVLTEIAGLAQQGVKEINLLGQNVNAYRG------EMENG------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++
Sbjct: 214 ---EICD-------FATLL-RIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSHL 262
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL
Sbjct: 263 HLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTL 322
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L+K + +D++++F YS R T A N DD P E K RRL L E T + + V
Sbjct: 323 KLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTMV 381
Query: 493 GTVQLVLVEGPNKKAPD 509
GTVQ LVEG +KK PD
Sbjct: 382 GTVQRCLVEGISKKDPD 398
>gi|452128135|ref|ZP_21940714.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
holmesii H558]
gi|451926350|gb|EMD76486.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
holmesii H558]
Length = 471
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/467 (37%), Positives = 253/467 (54%), Gaps = 46/467 (9%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
APA+ + T S G+IY T+GCQMN D + ++ +++ EV + PE A+VI
Sbjct: 11 APAASSPAPTAS-----GKIYIRTFGCQMNEYDSDKMMDVLREDQGLEVTDNPEEADVIL 65
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
NTC++R+ A+ KV+ L LK+ V I V GC+A + + I+
Sbjct: 66 FNTCSVREKAQEKVFSDLGRVQHLKKLNPHLV------------IGVGGCVASQEGEAIV 113
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFV 238
VDVV GP LP L+ D G ++ E + ++ P RI TAFV
Sbjct: 114 KRAPYVDVVFGPQTLHRLPELIRRRRDEGVSQVDISFPEIEKFDNMPPARI--EGATAFV 171
Query: 239 SVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG 298
S+M GC+ CSFC+VP+TRG E SRP E ++ EV +L +GV+EVTLLGQNVN+Y
Sbjct: 172 SIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEVADLADQGVREVTLLGQNVNAYR---- 227
Query: 299 MEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDE 357
R+ EG + + FA LL+ + E P + R RYT+ HPK+
Sbjct: 228 ----------GRM-EGSDEIAD-------FAMLLEYVH-EIPGIERIRYTTSHPKEMTQR 268
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
++ P + ++HLP Q G+ VL M+RGYT + +V+K+R P++ LSSDFI
Sbjct: 269 MVEAYARLPKLVSFLHLPVQAGSDRVLSAMKRGYTALEFKSVVRKLRAARPNLTLSSDFI 328
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GF GETEE+ T+ L+ VG+D ++ F YS R T A + DD P++VK +RL +L
Sbjct: 329 VGFPGETEEDFQKTMKLIADVGFDTSFSFVYSRRPGTPAA-DLSDDTPQDVKLKRLQQLQ 387
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
E S VGT Q +LVEGP+++ P+ EL+G+++ V F
Sbjct: 388 ALINEQAAAIAQSMVGTRQRLLVEGPSRRDPN-ELMGRTENNRIVNF 433
>gi|325914746|ref|ZP_08177084.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Xanthomonas vesicatoria
ATCC 35937]
gi|325539023|gb|EGD10681.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Xanthomonas vesicatoria
ATCC 35937]
Length = 489
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 243/457 (53%), Gaps = 44/457 (9%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ + E+ + PE+A+V+ +NTC+IR+ A+ KV+
Sbjct: 35 RGKLYIKTHGCQMNEYDSAKMADVLAASEGLELTDNPEDADVVLVNTCSIREKAQEKVFS 94
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L + LK K T P I V GC+A + + I+ VD+V GP
Sbjct: 95 QLGRWRLLKESRAKAGGT-------PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 147
Query: 196 DLPRLL--------EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 247
LP L+ +VD I L E AD +AFVS+M GC+
Sbjct: 148 RLPELIRARRQSGKSQVDISFPEIEKFDRLPEPRAD---------GPSAFVSIMEGCSKY 198
Query: 248 CSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGA 307
CSFC+VP+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y G + + E
Sbjct: 199 CSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAD-EAAQ 257
Query: 308 NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
L ++ +++ +G R R+T+ HP +F D L+ R P
Sbjct: 258 YADLGLLIRTIAQIEGIG-----------------RIRFTTSHPLEFSDSLVDAYRGVPQ 300
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
+ Y+HLP Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GETE +
Sbjct: 301 LANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETEAD 360
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
T+ L++ VG+D ++ F YS R T A + DD P+ VKQ RL L
Sbjct: 361 FEKTMKLIEDVGFDQSFSFVYSRRPGTPAA-DLEDDTPDAVKQARLARLQAHISAHAATI 419
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
S VG+VQ VLVEGP+++ P+ EL GKS+ V F
Sbjct: 420 SQSMVGSVQRVLVEGPSRRDPN-ELTGKSENMRPVNF 455
>gi|433445654|ref|ZP_20409960.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Anoxybacillus
flavithermus TNO-09.006]
gi|432000930|gb|ELK21818.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Anoxybacillus
flavithermus TNO-09.006]
Length = 526
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 256/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE+A VI +NTCAIR+ AE+KV+ +
Sbjct: 84 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDRPEDANVILLNTCAIRENAENKVFGEI 142
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK Q+ + V GCM+ E + +KIL + VD++ G
Sbjct: 143 GHLKPLK------------QNNPDLLLGVCGCMSQEESVVNKILKQFQYVDMIFGTHNIH 190
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L+E ++ + + S E + P ++ K ++ A+V++M GC+ C++CIVP+
Sbjct: 191 RLPYILKEAYMSKEMVVEVWSKEGDVIENLP-KVRKGNIKAWVNIMYGCDKFCTYCIVPY 249
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV L +G KE+TLLGQNVN+Y + F
Sbjct: 250 TRGKERSRRPEDIIQEVRHLAAQGYKEITLLGQNVNAY------------------GKDF 291
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M K GL DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 292 TDM----KYGL--GDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLVEHIHL 343
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S VL+ M R YTRE YL+LV+KI++ IP V L++D I GF ET+E+ +TL+L
Sbjct: 344 PVQSGSSEVLKMMARKYTREQYLELVRKIKEAIPGVALTTDIIVGFPNETDEQFEETLSL 403
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D A+ F YS RE T A + VD+VP EVK+ RL L E + + G
Sbjct: 404 YREVEFDSAFTFIYSPREGTPAAK-MVDNVPMEVKKERLQRLNALVNEISAKKMKEYEGQ 462
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K PD L G + + V F
Sbjct: 463 VVEVLVEGESKNNPDV-LAGYTRKNKLVNF 491
>gi|212639354|ref|YP_002315874.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Anoxybacillus
flavithermus WK1]
gi|229890441|sp|B7GJM6.1|MIAB_ANOFW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|212560834|gb|ACJ33889.1| 2-methylthioadenine synthetase [Anoxybacillus flavithermus WK1]
Length = 527
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 256/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE+A VI +NTCAIR+ AE+KV+ +
Sbjct: 85 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDRPEDANVILLNTCAIRENAENKVFGEI 143
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK Q+ + V GCM+ E + +KIL + VD++ G
Sbjct: 144 GHLKPLK------------QNNPDLLLGVCGCMSQEESVVNKILKQFQYVDMIFGTHNIH 191
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L+E ++ + + S E + P ++ K ++ A+V++M GC+ C++CIVP+
Sbjct: 192 RLPYILKEAYMSKEMVVEVWSKEGDVIENLP-KVRKGNIKAWVNIMYGCDKFCTYCIVPY 250
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV L +G KE+TLLGQNVN+Y + F
Sbjct: 251 TRGKERSRRPEDIIQEVRHLAAQGYKEITLLGQNVNAY------------------GKDF 292
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M K GL DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 293 TDM----KYGL--GDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLVEHIHL 344
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S VL+ M R YTRE YL+LV+KI++ IP V L++D I GF ET+E+ +TL+L
Sbjct: 345 PVQSGSSEVLKMMARKYTREQYLELVRKIKEAIPGVALTTDIIVGFPNETDEQFEETLSL 404
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D A+ F YS RE T A + VD+VP EVK+ RL L E + + G
Sbjct: 405 YREVEFDSAFTFIYSPREGTPAAK-MVDNVPMEVKKERLQRLNALVNEISAKKMKEYEGQ 463
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K PD L G + + V F
Sbjct: 464 VVEVLVEGESKNNPDV-LAGYTRKNKLVNF 492
>gi|420187502|ref|ZP_14693522.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM039]
gi|394255944|gb|EJE00880.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM039]
Length = 514
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 258/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L AV ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLSLYDAVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGIYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VL EG +KK + L G +D+ V F
Sbjct: 442 SQYEGKIVTVLCEGSSKKDENV-LAGYTDKNKLVNF 476
>gi|452124739|ref|ZP_21937323.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
holmesii F627]
gi|451923969|gb|EMD74110.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
holmesii F627]
Length = 471
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 174/467 (37%), Positives = 253/467 (54%), Gaps = 46/467 (9%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
APA+ + T S G+IY T+GCQMN D + ++ +++ EV + PE A+VI
Sbjct: 11 APAASSPAPTAS-----GKIYIRTFGCQMNEYDSDKMVDVLREDQGLEVTDNPEEADVIL 65
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
NTC++R+ A+ KV+ L LK+ V I V GC+A + + I+
Sbjct: 66 FNTCSVREKAQEKVFSDLGRVQHLKKLNPHLV------------IGVGGCVASQEGEAIV 113
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFV 238
VDVV GP LP L+ D G ++ E + ++ P RI TAFV
Sbjct: 114 KRAPYVDVVFGPQTLHRLPELIRRRRDEGVSQVDISFPEIEKFDNMPPARI--EGATAFV 171
Query: 239 SVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG 298
S+M GC+ CSFC+VP+TRG E SRP E ++ EV +L +GV+EVTLLGQNVN+Y
Sbjct: 172 SIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEVADLADQGVREVTLLGQNVNAYR---- 227
Query: 299 MEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDE 357
R+ EG + + FA LL+ + E P + R RYT+ HPK+
Sbjct: 228 ----------GRM-EGSDEIAD-------FAMLLEYVH-EIPGIERIRYTTSHPKEMTQR 268
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
++ P + ++HLP Q G+ VL M+RGYT + +V+K+R P++ LSSDFI
Sbjct: 269 MVEAYARLPKLVSFLHLPVQAGSDRVLSAMKRGYTALEFKSVVRKLRAARPNLTLSSDFI 328
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GF GETEE+ T+ L+ VG+D ++ F YS R T A + DD P++VK +RL +L
Sbjct: 329 VGFPGETEEDFQKTMKLIADVGFDTSFSFVYSRRPGTPAA-DLSDDTPQDVKLKRLQQLQ 387
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
E S VGT Q +LVEGP+++ P+ EL+G+++ V F
Sbjct: 388 ALINEQAAAIAQSMVGTRQRLLVEGPSRRDPN-ELMGRTENNRIVNF 433
>gi|289550913|ref|YP_003471817.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus lugdunensis
HKU09-01]
gi|315658416|ref|ZP_07911288.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
lugdunensis M23590]
gi|385784541|ref|YP_005760714.1| hypothetical protein SLUG_16020 [Staphylococcus lugdunensis
N920143]
gi|418414214|ref|ZP_12987430.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635639|ref|ZP_13198010.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
lugdunensis VCU139]
gi|289180445|gb|ADC87690.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus lugdunensis
HKU09-01]
gi|315496745|gb|EFU85068.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
lugdunensis M23590]
gi|339894797|emb|CCB54093.1| conserved hypothetical protein [Staphylococcus lugdunensis N920143]
gi|374841668|gb|EHS05128.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
lugdunensis VCU139]
gi|410877852|gb|EKS25744.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 514
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 171/454 (37%), Positives = 259/454 (57%), Gaps = 46/454 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
QGR + +TYGCQMN +D E++ I++ GY ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GQGRTFLIKTYGCQMNAHDTEVMAGILEALGYQSTSDIQE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ + LK+ ++ I V GCM+ E + +KIL + + VD++ G
Sbjct: 124 FSEIGNLKHLKK------------NRPDCLIGVCGCMSQEESVVNKILKSYQNVDMIFGT 171
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +LEE + + + S E + P ++ + ++ A+V++M GC+ C++C
Sbjct: 172 HNIHKLPEILEEAYMSKAMVVDVWSKEGDIIENLP-KVREGNIKAWVNIMYGCDKFCTYC 230
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY K++E
Sbjct: 231 IVPFTRGKERSRRPEDIIAEVKELAREGYQEITLLGQNVNSYG------KDIE------- 277
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 278 -----------DIDYELGDLLEAISKIDIP--RVRFTTSHPWDFTDRMIQVIAQGGNIVP 324
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+GN+AVL+ M R YTRE+YL+LV KI+ IP++ L++D I G+ ETE++ +
Sbjct: 325 HIHLPVQSGNNAVLKIMGRKYTRESYLELVSKIKAAIPNIALTTDIIVGYPNETEDQFEE 384
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TLTL V ++ AY + YS R+ T A + D+VP EVK++RL L + + + Q
Sbjct: 385 TLTLYDEVAFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKQRLQRLNQKVGQYSQQAMSH 443
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
T VL EG +KK DT L G + + V F
Sbjct: 444 YENTTVTVLCEGTSKK-DDTVLAGYTGKNKLVNF 476
>gi|220932005|ref|YP_002508913.1| MiaB family RNA modification protein [Halothermothrix orenii H 168]
gi|219993315|gb|ACL69918.1| RNA modification enzyme, MiaB family [Halothermothrix orenii H 168]
Length = 450
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 163/431 (37%), Positives = 248/431 (57%), Gaps = 44/431 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNV+D E + +++ GY N+ E A++I +NTCA+R+ AE +V+ R+ F
Sbjct: 10 TYGCQMNVHDSEKLAGMLEEMGYKSTNNL-EEADIIMVNTCAVRENAELRVFGRVGDFKR 68
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKD--KILDADKMVDVVCGPDAYRDLPR 199
LK K+P I+ V GCM + ++ K+ + VD++ G +P
Sbjct: 69 LK-------------EKNPDLIIGVGGCMMQIDENARKLYEKYPHVDLIFGTHNIHHIPE 115
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L++ + + I + + EE P + ++ A++S+++GCNN C++CIVP+ RGR
Sbjct: 116 LIKRIKEERGRIIEVWNQEEGLIPDIPYK-REDDFKAWISIIQGCNNFCTYCIVPYVRGR 174
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSRP I+ E +L EGVKE+TLLGQNVNSY
Sbjct: 175 ERSRPAADIISEARKLASEGVKEITLLGQNVNSYG------------------------- 209
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
K K + FADLL RL+ R RY + HP+DF D+++ I+++ VC++ HLP Q+G
Sbjct: 210 KDLKEDIDFADLLKRLNRVEGIKRIRYMTSHPRDFSDKMIKIIKECDKVCEHFHLPVQSG 269
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L++M RGYT+ YL+L++KI+ IPD +++D I GF GETEE+ +TL +++ V
Sbjct: 270 STRILKKMNRGYTQAEYLNLIKKIKSQIPDYSITTDIIVGFPGETEEDFQETLKVIREVR 329
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+DMAY F YS R+ T A R + D V E++KQ RLT LIE + + G VL
Sbjct: 330 FDMAYTFKYSPRKGTPAAR-HKDQVSEKIKQDRLTRLIEVQNSISLENNRKLKGKTVEVL 388
Query: 500 VEGPNKKAPDT 510
+EG ++ PDT
Sbjct: 389 IEGESRNNPDT 399
>gi|58426983|gb|AAW76020.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 550
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 244/450 (54%), Gaps = 35/450 (7%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ + E+ + PE A+V+ +NTC+IR+ A+ KV+
Sbjct: 101 RGKLYIKTHGCQMNEYDSAKMADVLAASEGLELTDNPEEADVVLVNTCSIREKAQEKVFS 160
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L WK A G+ P I V GC+A + + I+ VD+V GP
Sbjct: 161 QLG-------RWKALKAGGK-----PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 208
Query: 196 DLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L+ + G+ ++ E + + R S AFVS+M GC+ CSFC+VP
Sbjct: 209 RLPELIRARRESGKSQVDISFPEIEKFDRLPEPRAEGPS--AFVSIMEGCSKYCSFCVVP 266
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y G + +P L
Sbjct: 267 YTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAG-DPAQYADLGLL 325
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
++ +++ +G R R+T+ HP +F D L+ RD P + Y+HL
Sbjct: 326 IRTIAQIEGIG-----------------RIRFTTSHPLEFSDSLVDAYRDVPQLANYLHL 368
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GETE + T+ L
Sbjct: 369 PVQAGSDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKL 428
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG+D ++ F YS R T A + DD PE VKQ RL L S VG+
Sbjct: 429 IEDVGFDQSFSFVYSRRPGTPAS-DLQDDTPETVKQARLARLQAHISAHAASISQSMVGS 487
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLVEGP+++ P+ EL GKS+ V F
Sbjct: 488 VQRVLVEGPSRRDPN-ELTGKSENMRPVNF 516
>gi|269213889|ref|ZP_06158241.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria cinerea ATCC
14685]
gi|269145278|gb|EEZ71696.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria cinerea ATCC
14685]
Length = 518
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 247/442 (55%), Gaps = 44/442 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAE 130
+ + +++ T+GCQMN D E +LS++ + G E + P++A++I NTC++R+ A+
Sbjct: 73 KTQTMKKVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQPDDADIILFNTCSVREKAQ 132
Query: 131 HKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVC 189
KV+ L LK K+P I+ V GC+A + + I+ VDVV
Sbjct: 133 EKVFSDLGRVRPLK-------------EKNPDLIIGVAGCVASQEGENIVKRAPYVDVVF 179
Query: 190 GPDAYRDLPRLL-EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
GP LP+L+ ++ G I+ E + + P R+ S AF+S+M GC+ C
Sbjct: 180 GPQTLHRLPKLIVDKETTGLSQIDISFPEIEKFDHLPPARVEGGS--AFISIMEGCSKYC 237
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
S+C+VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 238 SYCVVPYTRGEEFSRPLNDVLTEIAGLAQQGVKEINLLGQNVNAYRG------EMENG-- 289
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPN 367
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P
Sbjct: 290 --------EICD-------FATLL-RIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPK 333
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
+ ++HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E
Sbjct: 334 LVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETERE 393
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
TL L+K + +D++++F YS R T A N DD P E K RRL L E T +
Sbjct: 394 FEQTLKLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARI 452
Query: 488 YDSQVGTVQLVLVEGPNKKAPD 509
+ VGTVQ LVEG +KK PD
Sbjct: 453 NQTMVGTVQRCLVEGISKKDPD 474
>gi|374815351|ref|ZP_09719088.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Treponema
primitia ZAS-1]
Length = 460
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 167/454 (36%), Positives = 252/454 (55%), Gaps = 44/454 (9%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGCQMN + + +++ G+S V N E+A++ +NTC++R AE +V+ RL
Sbjct: 4 FFETYGCQMNSAESAALALVLRERGWSAVEN-GESADLTILNTCSVRQTAEQRVFGRLAQ 62
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
+ LK++ R P ++V GCMAERL + + + VD V G + P
Sbjct: 63 YQSLKKK--------RRSLGQPFTLIVAGCMAERLGEGLKEKFDAVDYVMGTASRSVFPA 114
Query: 200 LLEEVDYGQ-------KGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
+LE ++ GQ I +L+ E+ S + + +FV +M GCNN CS+CI
Sbjct: 115 ILETLEKGQGPDLRSDDSITAILTGEKPQFSFSSSHLEEGRFRSFVPIMHGCNNYCSYCI 174
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+ RGRE SR SI +E+ L GV+E+TLLGQNVNSY G V+
Sbjct: 175 VPYVRGREISRSPASIAEEIRLLSDRGVREITLLGQNVNSYRFEDGERAPVD-------- 226
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEF---PEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
F LL+ ++ E P R+ S HPKD + + +M + P C
Sbjct: 227 ---------------FPALLELVAHETESSPIRWVRFLSSHPKDLSSQAIRVMAEHPVFC 271
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
+++HL Q G++AVL M R YTRE YL+LV +IRQ +PD+ LS+DF+ GF GETEE+
Sbjct: 272 RHLHLCVQHGSNAVLNAMNRRYTRERYLELVDEIRQAMPDISLSTDFLVGFPGETEEDLE 331
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
TL LM+ V + AYM+ Y+ RE T A+ ++ V EE+K+ RL +I ++ T +
Sbjct: 332 LTLDLMERVKFHYAYMYHYNPREGTAAY-DFPGRVGEELKRNRLARVIALQKKHTQELLK 390
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVA 523
+VG+ + +L+EG ++K D EL+G+++R VA
Sbjct: 391 RRVGSRETILIEGISRKNAD-ELIGRTERDEMVA 423
>gi|416124308|ref|ZP_11595304.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis FRI909]
gi|420176865|ref|ZP_14683259.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM057]
gi|420179459|ref|ZP_14685750.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM053]
gi|319401418|gb|EFV89628.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis FRI909]
gi|394251772|gb|EJD96848.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM057]
gi|394253663|gb|EJD98659.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM053]
Length = 517
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 257/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TLTL V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLTLYDDVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGMYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VL EG +KK + L G +D+ V F
Sbjct: 442 SQYEGKIVTVLCEGSSKKDENV-LAGYTDKNKLVNF 476
>gi|242242576|ref|ZP_04797021.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
W23144]
gi|418329422|ref|ZP_12940490.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|418615521|ref|ZP_13178463.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU118]
gi|418630421|ref|ZP_13192903.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU128]
gi|420174938|ref|ZP_14681384.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM061]
gi|420191659|ref|ZP_14697570.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM023]
gi|242234003|gb|EES36315.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
W23144]
gi|365230457|gb|EHM71552.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|374816960|gb|EHR81151.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU118]
gi|374837962|gb|EHS01520.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU128]
gi|394244471|gb|EJD89813.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM061]
gi|394265810|gb|EJE10457.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM023]
Length = 514
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 258/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TLTL V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLTLYDDVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGMYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VL EG +KK ++ L G +D+ V F
Sbjct: 442 SQYEGKIVTVLCEGSSKK-DESVLAGYTDKNKLVNF 476
>gi|335429548|ref|ZP_08556446.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haloplasma
contractile SSD-17B]
gi|334889558|gb|EGM27843.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haloplasma
contractile SSD-17B]
Length = 482
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/447 (39%), Positives = 263/447 (58%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+T+GCQMNV+D E++ I++N G++ N E A++I +NTCAIR+ AE+KV+ ++
Sbjct: 49 DTFGCQMNVHDTEVMSGILQNMGFNHTKN-EEEADIIILNTCAIRENAENKVFGKIGALK 107
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLP 198
LKRE +P I+ V GCM+ E++ + +L+ + VD++ G LP
Sbjct: 108 HLKRE-------------NPDLILGVCGCMSQEEKIVNTLLEKYQHVDLIFGTHNIHRLP 154
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
L + ++ I + S E + P R + SV A+V++ GC+ C++CIVPFTRG
Sbjct: 155 EYLRDAYLNKERIVEVWSQEGDIVEHMPKR-REGSVKAWVNITYGCDEFCTYCIVPFTRG 213
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
+ERSR + I+ EV EL + G KEVTLLGQNVNSY G ++
Sbjct: 214 KERSRLPKDIINEVRELAELGYKEVTLLGQNVNSY------------GKDF--------- 252
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K +K G F DLL+ L+ ++ P R R+T+ HPKDF D+ + + N+ ++IHLP Q
Sbjct: 253 -KDEKYG--FGDLLNDLNKVDIP--RVRFTTSHPKDFDDKSVAALGKGGNLVEHIHLPVQ 307
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+ VL+RM R YTRE YL+LV+K+++ IP+V L++D I GF ET+E+ DTL+L+K
Sbjct: 308 SGNTDVLKRMNRKYTREDYLELVRKLKETIPNVSLTTDIIVGFPNETDEQFEDTLSLVKE 367
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGY+ A+ F YS RE T A + D+VP EVK+ RL L + E + ++ G V
Sbjct: 368 VGYEGAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNKLVNEGYRKGHEQYKGQVVE 426
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +K D+ L G + V F
Sbjct: 427 VLCEGTSKN-DDSILAGYTRTNKLVNF 452
>gi|418634076|ref|ZP_13196474.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU129]
gi|420189484|ref|ZP_14695458.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM037]
gi|420204215|ref|ZP_14709775.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM015]
gi|374838068|gb|EHS01625.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU129]
gi|394262034|gb|EJE06819.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM037]
gi|394274229|gb|EJE18654.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM015]
Length = 514
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 258/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TLTL V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLTLYDDVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGMYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VL EG +KK ++ L G +D+ V F
Sbjct: 442 SQYEGKIVTVLCEGSSKK-DESVLAGYTDKNKLVNF 476
>gi|424834370|ref|ZP_18259081.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
sporogenes PA 3679]
gi|365978716|gb|EHN14785.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
sporogenes PA 3679]
Length = 450
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 255/456 (55%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+++ G+ + ET+GCQMN D E + ++K GY E A+VI NTC +R+ AE
Sbjct: 9 DINIIGKFFIETWGCQMNEEDSEKLSGMLKREGYIRT-EEREEADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK +K+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------AKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + L EV + + E++ + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFSNYLNEVKKKHTSVLKIQEKEDSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ L +G KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEDEIKNLVSKGYKEITLLGQNVNSYG------KDLEPK-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------ITFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V +S+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSDMLKKMNRHYDREKYLDVVSKIKRLIPNVAISTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL L+K V YD A+ F YS+R+ T A + + + VPE+VK +R L+E E + +
Sbjct: 329 EETLNLVKTVEYDSAFTFLYSIRKGTPAAK-FENQVPEDVKHKRFNRLVEVVNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G V+ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKVEEVLVEGTSKN-DEGKLMGRTRTGKLVNF 422
>gi|415886653|ref|ZP_11548433.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
methanolicus MGA3]
gi|387587340|gb|EIJ79663.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
methanolicus MGA3]
Length = 514
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 255/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE+A VI +NTCAIR+ AE+KV+ +
Sbjct: 70 KFYIRTYGCQMNEHDTEVMAGIFMGLGY-EPTDRPEDANVILLNTCAIRENAENKVFGEI 128
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK E K ++ G V GCM+ E + +KIL + VD++ G
Sbjct: 129 GHLKALKME-KPDLLLG-----------VCGCMSQEESVVNKILKQYQYVDMIFGTHNIH 176
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L E ++ + + S E + P ++ + ++ A+V++M GC+ C++CIVP+
Sbjct: 177 RLPNILHEAYMSKEMVVEVWSKEGDIIENLP-KVRRGNIKAWVNIMYGCDKFCTYCIVPY 235
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV L +G KE+TLLGQNVN+Y + F
Sbjct: 236 TRGKERSRRPEDIIQEVRHLAAQGYKEITLLGQNVNAY------------------GKDF 277
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M K GL DL++ + ++ P R R+T+ HP+DF D L+ ++ N+ +IHL
Sbjct: 278 TDM----KYGL--GDLMEEIRKIDIP--RVRFTTSHPRDFDDHLIEVLAKGGNLMPHIHL 329
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ VL+ M R YTRE YL+LV+KI+ IPDV L++D I G+ ETEE+ +TL+L
Sbjct: 330 PVQSGSTDVLKIMARKYTREEYLELVRKIKAAIPDVALTTDIIVGYPNETEEQFEETLSL 389
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG++ AY F YS RE T A + D+VP EVK+ RL L E + G
Sbjct: 390 YREVGFESAYTFIYSPREGTPAAK-MQDNVPMEVKKERLQRLNALVNELSRDAMKKYEGQ 448
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +K PD L G + + V F
Sbjct: 449 IVEVLVEGESKNNPDV-LAGYTSKNKLVNF 477
>gi|381401758|ref|ZP_09926651.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Kingella
kingae PYKK081]
gi|380833317|gb|EIC13192.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Kingella
kingae PYKK081]
Length = 440
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/437 (37%), Positives = 249/437 (56%), Gaps = 46/437 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +L+++ + G E ++ PE A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLAVLAEEHGGIEQVSEPEGADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK++ + + I V GC+A + + I++ VDVV GP
Sbjct: 63 LGRVKHLKKDNPQLI------------IGVAGCVASQEGEAIIERAPYVDVVFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP+++ VD G++ + +S E + + P R+ S AF+S+M GC+ CSFC+V
Sbjct: 111 LPKMI--VDKETTGLSQVDISFPEIEKFDHLPPARVEGGS--AFISIMEGCSKYCSFCVV 166
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 167 PYTRGEEFSRPLNDVLTEIANLVQQGVKEINLLGQNVNAYRG------EMDNG------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++
Sbjct: 214 ---EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFSDAIIECYRDLPKLVSHL 262
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL
Sbjct: 263 HLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTL 322
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L+K + +D++++F YS R T A N DD P E K RRL L E T + + +
Sbjct: 323 KLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTML 381
Query: 493 GTVQLVLVEGPNKKAPD 509
GT+Q LVEG +KK PD
Sbjct: 382 GTIQRCLVEGVSKKDPD 398
>gi|319639318|ref|ZP_07994069.1| hypothetical protein HMPREF0604_01693 [Neisseria mucosa C102]
gi|317399502|gb|EFV80172.1| hypothetical protein HMPREF0604_01693 [Neisseria mucosa C102]
Length = 440
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 248/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +LS++ + G E + P++A++I NTC++R+ A+ K++
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQPDDADIILFNTCSVREKAQEKIFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPDLIIGVAGCVASQEGENIVKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+L+ VD G++ + +S E + + P R+ S AF+S+M GC+ CS+C+
Sbjct: 110 RLPKLI--VDKETTGLSQIDISFPEIEKFDHLPPARVEGGS--AFISIMEGCSKYCSYCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIAGLAQQGVKEINLLGQNVNAYRG------EMENG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
VGTVQ LVEG +KK PD
Sbjct: 381 VGTVQRCLVEGISKKDPD 398
>gi|241759310|ref|ZP_04757416.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria flavescens
SK114]
gi|241320446|gb|EER56743.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria flavescens
SK114]
Length = 440
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 248/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +LS++ + G E + P++A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQPDDADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPDLIIGVAGCVASQEGENIVKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+L+ VD G++ + +S E + + P R+ S AF+S+M GC+ CS+C+
Sbjct: 110 RLPKLI--VDKETTGLSQIDISFPEIEKFDHLPPARVEGGS--AFISIMEGCSKYCSYCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIAGLAQQGVKEINLLGQNVNAYRG------EMENG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|315648053|ref|ZP_07901154.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
vortex V453]
gi|315276699|gb|EFU40042.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
vortex V453]
Length = 519
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 254/445 (57%), Gaps = 46/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + +++ GY + + A++I +NTCAIR+ AE KV+ L +
Sbjct: 80 TYGCQMNEHDSETIKGLLEQMGY-QATEDRKQADIILLNTCAIRENAEDKVFGELGHLKH 138
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPRL 200
LK E K ++ G V GCM+ E + ++IL VD++ G LP L
Sbjct: 139 LKIE-KPDMLLG-----------VCGCMSQEESVVNRILQKHGFVDLIFGTHNVHRLPHL 186
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
++E + ++ + + S E + P + + + +V++M GC+ C++CIVP+TRG+E
Sbjct: 187 IQEALFSKEMVVEVWSKEGDIIENLPKK--REGLRGWVNIMYGCDKFCTYCIVPYTRGKE 244
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
RSR E ++ EV EL ++G KE+TLLGQNVN+Y G ++
Sbjct: 245 RSRRPEDVIAEVRELARQGYKEITLLGQNVNAY------------GKDF----------- 281
Query: 321 VKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+ + RF DL+D + ++ P R R+T+ HP+DF D L+ ++ N+ ++IHLP Q+G
Sbjct: 282 -EDIEYRFGDLMDAIHKIDIP--RVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQSG 338
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S VL++M R YTRE YL+L KI++ IP+V ++D I GF GET+E+ +TL+L++ VG
Sbjct: 339 SSQVLKKMSRKYTRETYLELAHKIKKAIPNVAFTTDIIVGFPGETDEQFEETLSLVREVG 398
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
YD AY F YS RE T A D+VP EVK RL L A E + Q D +G VL
Sbjct: 399 YDAAYTFIYSPREGTPA-AVMEDNVPMEVKSERLQRLNAAISEYSRQSNDRLLGATVEVL 457
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +K D+ L G++ V F
Sbjct: 458 VEGVSKNN-DSMLSGRTRTNKLVHF 481
>gi|42523558|ref|NP_968938.1| hypothetical protein Bd2086 [Bdellovibrio bacteriovorus HD100]
gi|81617194|sp|Q6MLC6.1|MIAB_BDEBA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|39575764|emb|CAE79931.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 453
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/430 (36%), Positives = 243/430 (56%), Gaps = 47/430 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y TYGCQMNVND E + ++++ + V + P+ A +I IN+C++R+ HKV+ +
Sbjct: 23 VYISTYGCQMNVNDTERMYALLEMQNFVPVTD-PKKASLIIINSCSVREKPVHKVYSEVG 81
Query: 139 YFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ ++KR K+P KI V GC+ ++ K+ ++ M+D V G D L
Sbjct: 82 TYKYMKR-------------KNPELKIGVGGCVGQQEKENLMKTQPMIDFVFGTDQIDSL 128
Query: 198 PRLLEEVDYGQKG-INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+L+ + G++ +N+ Y + VR V +V++ +GC+N C+FC+VP+T
Sbjct: 129 PQLVAKSFAGERRLVNSRFEHRSPYHIETLVR--NPGVATYVNITKGCDNFCTFCVVPYT 186
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE+SRPV+ I+ ++ L K GVKEVTLLGQNVNSY G++
Sbjct: 187 RGREKSRPVQHILTDIRHLVKRGVKEVTLLGQNVNSYQGDEGID---------------- 230
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN-VCKYIHLP 375
FADLL +++ E R RYT+ HPKDF +L+ +M + N + +YIHLP
Sbjct: 231 -----------FADLLAKVAKETDVERIRYTTSHPKDFNQKLVDVMAEHSNKIMEYIHLP 279
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G++ VLERM R YTRE YL+ + I++ +P+V S+D I GF GETEE+ DTL ++
Sbjct: 280 FQAGSTKVLERMNRNYTREEYLERIAMIQKGLPNVCFSTDIIVGFPGETEEDFQDTLNMV 339
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
VG++ + F+YS R T A + + D +PE+VK RL L + + GT
Sbjct: 340 TEVGFETIFAFSYSPRPFTKAAK-FEDQLPEDVKNERLNRLFDVHEAMAFERVKRYEGTT 398
Query: 496 QLVLVEGPNK 505
VLVE ++
Sbjct: 399 MKVLVENVDR 408
>gi|285018048|ref|YP_003375759.1| 2-methylthioadenine synthetase [Xanthomonas albilineans GPE PC73]
gi|283473266|emb|CBA15771.1| putative 2-methylthioadenine synthetase protein [Xanthomonas
albilineans GPE PC73]
Length = 470
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/460 (35%), Positives = 245/460 (53%), Gaps = 34/460 (7%)
Query: 66 SSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAI 125
+S + ++G++Y +T+GCQMN D + ++ A E+ + PE A+V+ +NTC+I
Sbjct: 12 TSTPATPSPARGKLYIKTHGCQMNEYDSAKMADVLAAAEGLELTDNPEEADVVLVNTCSI 71
Query: 126 RDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMV 185
R+ A+ KV+ +L + LK K+ + I V GC+A + + I+ V
Sbjct: 72 REKAQEKVFSQLGRWKALKAGGKQVI------------IGVGGCVASQEGEAIVKRAPYV 119
Query: 186 DVVCGPDAYRDLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGC 244
D+V GP LP L+ GQ ++ E + + R S AFVS+M GC
Sbjct: 120 DLVFGPQTLHRLPELIRARRASGQSQVDISFPEVEKFDRLPEPRAEGPS--AFVSIMEGC 177
Query: 245 NNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVE 304
+ CSFC+VP+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y E
Sbjct: 178 SKYCSFCVVPYTRGEEISRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGPYADADVGE 237
Query: 305 PGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRD 364
+ L S+ +++ +G R R+T+ HP +F D L+ RD
Sbjct: 238 DPQHADLGLLIRSIAQIEGIG-----------------RIRFTTSHPLEFSDSLVDAYRD 280
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
P + Y+HLP Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GET
Sbjct: 281 VPQLANYLHLPVQAGSDRILSAMKRGYTALEFKQKIRKLRAVRPDIAISSDFIVGFPGET 340
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
+ + T+ L++ VG+D ++ F YS R T A + DD PE VK RLT L
Sbjct: 341 DADFDKTMRLIEDVGFDQSFSFIYSRRPGTPAA-DLEDDTPEAVKHARLTRLQAHINAHA 399
Query: 485 GQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q S +G+VQ VLVEGP+KK P EL GK++ V F
Sbjct: 400 QQISRSMIGSVQTVLVEGPSKKNP-AELTGKTENMRSVNF 438
>gi|289424090|ref|ZP_06425876.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptostreptococcus
anaerobius 653-L]
gi|289155515|gb|EFD04194.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptostreptococcus
anaerobius 653-L]
Length = 482
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/447 (37%), Positives = 259/447 (57%), Gaps = 45/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+T+GCQMN +D E+++S++++ GYS ++ + A+++ NTCA+R+ AE KV+ L +
Sbjct: 44 QTFGCQMNEHDSEMLISMLESIGYSRALS-EDTADIVIYNTCAVRENAELKVYGNLGHLK 102
Query: 142 FLKREWKKNVATGRSQSKHPP-KIVVLGCM--AERLKDKILDADKMVDVVCGPDAYRDLP 198
+KR K P KIVV GCM E + ++I + VD+V G P
Sbjct: 103 SIKR-------------KRPDMKIVVCGCMMQQEHIVEEIKAKHQHVDLVFGTHNLYKFP 149
Query: 199 RLLEEVDYGQKGINTLLSLE-ETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
LL K + + ++ E + R K + AFV++M GCNN C++CIVP+TR
Sbjct: 150 ELLASTFESDKILVDVWDIDGEVVEGLKSNR--KFDIKAFVNIMYGCNNFCTYCIVPYTR 207
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR + I+ E+++L K GV+EVTLLGQNVNSY T +E+E R+S
Sbjct: 208 GRERSRKPKDIISEIEDLVKGGVREVTLLGQNVNSYGKT--LEEE------DRIS----- 254
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
FADLL R++ R R+ S HPKD D+++Y MRD VC+++HLP Q
Sbjct: 255 ----------FADLLRRVNEIEGLERIRFMSSHPKDISDDVIYAMRDCKKVCEFLHLPFQ 304
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
G++++L++M R Y++E YL++++K ++ IPD+ S+D + GF GET+E+ DT+ + +
Sbjct: 305 VGSTSLLKKMNRHYSKEDYLNIIKKAKEEIPDLAFSTDIMIGFPGETDEDVQDTIDICEE 364
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D A+ F YS R+ T A + D +PEE+K +R +++ +G+ G +
Sbjct: 365 VRFDTAFTFIYSKRQGTPAAK-MEDQIPEEIKHKRFDKVLSVINRISGEKNHLYDGKIVE 423
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +KK + GKS + V F
Sbjct: 424 VLVEGASKKDSSI-MTGKSRQNKTVNF 449
>gi|395752214|ref|XP_002830253.2| PREDICTED: CDK5 regulatory subunit-associated protein 1-like,
partial [Pongo abelii]
Length = 295
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/246 (56%), Positives = 179/246 (72%), Gaps = 3/246 (1%)
Query: 279 GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLE 338
G+KEVTLLGQNVNS+ D S E + LS GF + K K+ GLRFA LLD++S
Sbjct: 1 GLKEVTLLGQNVNSFRDNS--EVQFNNAVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRV 58
Query: 339 FPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLD 398
PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ+G+S VLE MRRGY+REAY++
Sbjct: 59 DPEMRIRFTSPHPKDFPDEVLQLIHERENICKQIHLPAQSGSSRVLEAMRRGYSREAYVE 118
Query: 399 LVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHR 458
LV +R+ IP V LSSDFI GFCGETEE+H T++L++ V Y+M ++FAYSMR++T A+
Sbjct: 119 LVHHVRESIPGVSLSSDFIAGFCGETEEDHIQTVSLLREVQYNMGFLFAYSMRQKTRAYH 178
Query: 459 NYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDR 518
DDVP+EVK RRL ELI FRE + + VG QLVLVEG +K++ T+L G++D
Sbjct: 179 RLKDDVPKEVKLRRLEELITVFREEATKANQTSVGCTQLVLVEGLSKRSA-TDLCGRNDG 237
Query: 519 GHRVAF 524
+V F
Sbjct: 238 NLKVIF 243
>gi|418411712|ref|ZP_12984978.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus epidermidis BVS058A4]
gi|410891295|gb|EKS39092.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus epidermidis BVS058A4]
Length = 514
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 257/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLSLYDDVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGIYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VL EG +KK + L G +D+ V F
Sbjct: 442 SQYEGKVVTVLCEGSSKKDENV-LAGYTDKNKLVNF 476
>gi|418325516|ref|ZP_12936722.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU071]
gi|365228118|gb|EHM69303.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU071]
Length = 514
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 257/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLSLYDDVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGIYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VL EG +KK + L G +D+ V F
Sbjct: 442 SQYEGKVVTVLCEGSSKKDENV-LAGYTDKNKLVNF 476
>gi|225024104|ref|ZP_03713296.1| hypothetical protein EIKCOROL_00972 [Eikenella corrodens ATCC
23834]
gi|224943129|gb|EEG24338.1| hypothetical protein EIKCOROL_00972 [Eikenella corrodens ATCC
23834]
Length = 441
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/435 (37%), Positives = 245/435 (56%), Gaps = 42/435 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
++Y T+GCQMN D + +L+++ + G E + P+NA++I NTC++R+ A+ KV+
Sbjct: 3 KVYIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVAEPDNADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +K++ NV G V GC+A + I++ VDVV GP
Sbjct: 63 LGRIKPIKQK-NPNVIIG-----------VAGCVASQEGAAIIERAPYVDVVFGPQTLHR 110
Query: 197 LPRLL-EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP+++ ++ G ++ E + + P R+ S AF+S+M GC+ CSFC+VP+
Sbjct: 111 LPKMIVDKETTGHSQVDISFPEIEKFDHLPPARVDGGS--AFISIMEGCSKYCSFCVVPY 168
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 169 TRGEEFSRPLGDVLTEIAGLAQQGVKEINLLGQNVNAYRG------EMDNG--------- 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++HL
Sbjct: 214 -EICD-------FATLL-RIVHEIPGIERLRFTTSHPREFSDAIIECYRDLPKLVSHLHL 264
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL L
Sbjct: 265 PIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKL 324
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+K + +D++++F YS R T A N DD P E K RRL L E T + + +GT
Sbjct: 325 VKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTMIGT 383
Query: 495 VQLVLVEGPNKKAPD 509
VQ LVEG +KK PD
Sbjct: 384 VQRCLVEGISKKDPD 398
>gi|420169829|ref|ZP_14676407.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM070]
gi|420206387|ref|ZP_14711897.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM008]
gi|420209429|ref|ZP_14714866.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM003]
gi|394243129|gb|EJD88503.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM070]
gi|394278226|gb|EJE22543.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM008]
gi|394278876|gb|EJE23188.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM003]
Length = 514
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 257/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIKVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLSLYDDVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGIYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VL EG +KK + L G +D+ V F
Sbjct: 442 SQYEGKIVTVLCEGSSKKDENV-LAGYTDKNKLVNF 476
>gi|261407895|ref|YP_003244136.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
sp. Y412MC10]
gi|261284358|gb|ACX66329.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp.
Y412MC10]
Length = 519
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 255/445 (57%), Gaps = 46/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + +++ GY + + A++I +NTCAIR+ AE KV+ L +
Sbjct: 80 TYGCQMNEHDSETIKGLLEQMGYRATED-RKQADIILLNTCAIRENAEDKVFGELGHLKH 138
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPRL 200
LK E K ++ G V GCM+ E + ++IL VD++ G LP L
Sbjct: 139 LKTE-KPDMLLG-----------VCGCMSQEESVVNRILQKHGFVDLIFGTHNVHRLPHL 186
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
++E + ++ + + S E + P + + + +V++M GC+ C++CIVP+TRG+E
Sbjct: 187 IQEALFSKEMVVEVWSKEGDIVENLPKK--REGLRGWVNIMYGCDKFCTYCIVPYTRGKE 244
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
RSR E ++ EV EL ++G KE+TLLGQNVN+Y G ++
Sbjct: 245 RSRRPEDVIAEVRELARQGYKEITLLGQNVNAY------------GKDF----------- 281
Query: 321 VKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+ + RF DL+D + ++ P R R+T+ HP+DF D L+ ++ N+ ++IHLP Q+G
Sbjct: 282 -EDIQYRFGDLMDDIHKIDIP--RVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQSG 338
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S VL++M R YTRE YL+L KI++ IP+V ++D I GF GET+E+ +TL+L++ VG
Sbjct: 339 SSQVLKKMSRKYTRETYLELAHKIKKAIPNVAFTTDIIVGFPGETDEQFEETLSLVREVG 398
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
YD AY F YS RE T A D+VP EVK RL L A E + + D +G+ VL
Sbjct: 399 YDSAYTFIYSPREGTPA-AVMEDNVPMEVKSERLQRLNAAINEYSRKSNDRLLGSTVEVL 457
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +K D+ L G++ V F
Sbjct: 458 VEGVSKNN-DSMLSGRTRTNKLVHF 481
>gi|27467889|ref|NP_764526.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
epidermidis ATCC 12228]
gi|57866805|ref|YP_188442.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
epidermidis RP62A]
gi|251810724|ref|ZP_04825197.1| 2-methylthioadenine synthetase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876275|ref|ZP_06285142.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis SK135]
gi|293366743|ref|ZP_06613419.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417646301|ref|ZP_12296162.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU144]
gi|417658991|ref|ZP_12308604.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU045]
gi|417909904|ref|ZP_12553637.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU037]
gi|417910848|ref|ZP_12554564.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU105]
gi|417913346|ref|ZP_12557013.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU109]
gi|418605439|ref|ZP_13168764.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU041]
gi|418607743|ref|ZP_13170966.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU057]
gi|418609881|ref|ZP_13173015.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU065]
gi|418612172|ref|ZP_13175218.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU117]
gi|418616672|ref|ZP_13179596.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU120]
gi|418622040|ref|ZP_13184796.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU123]
gi|418624502|ref|ZP_13187177.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU125]
gi|418626753|ref|ZP_13189349.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU126]
gi|418628490|ref|ZP_13191035.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU127]
gi|418664683|ref|ZP_13226149.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU081]
gi|419768123|ref|ZP_14294260.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-250]
gi|419770912|ref|ZP_14296974.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-K]
gi|420163370|ref|ZP_14670117.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM095]
gi|420165173|ref|ZP_14671877.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM088]
gi|420167650|ref|ZP_14674302.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM087]
gi|420172708|ref|ZP_14679206.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM067]
gi|420182962|ref|ZP_14689095.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM049]
gi|420193970|ref|ZP_14699799.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM021]
gi|420197182|ref|ZP_14702906.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM020]
gi|420201994|ref|ZP_14707589.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM018]
gi|420214227|ref|ZP_14719506.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH05005]
gi|420216059|ref|ZP_14721281.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH05001]
gi|420218841|ref|ZP_14723891.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH04008]
gi|420221916|ref|ZP_14726841.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH08001]
gi|420224778|ref|ZP_14729616.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH06004]
gi|420227083|ref|ZP_14731856.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH05003]
gi|420229406|ref|ZP_14734112.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH04003]
gi|420231764|ref|ZP_14736409.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH051668]
gi|420234452|ref|ZP_14739015.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH051475]
gi|421607205|ref|ZP_16048451.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
epidermidis AU12-03]
gi|81674874|sp|Q5HPP8.1|MIAB_STAEQ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|81843816|sp|Q8CSS3.1|MIAB_STAES RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|27315434|gb|AAO04568.1|AE016747_65 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637463|gb|AAW54251.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
RP62A]
gi|251805884|gb|EES58541.1| 2-methylthioadenine synthetase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295300|gb|EFA87827.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis SK135]
gi|291319044|gb|EFE59414.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329728030|gb|EGG64474.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU144]
gi|329736630|gb|EGG72896.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU045]
gi|341652513|gb|EGS76301.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU037]
gi|341655036|gb|EGS78772.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU105]
gi|341655628|gb|EGS79352.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU109]
gi|374402536|gb|EHQ73561.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU041]
gi|374403860|gb|EHQ74855.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU057]
gi|374406217|gb|EHQ77120.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU065]
gi|374410129|gb|EHQ80890.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU081]
gi|374820054|gb|EHR84168.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU117]
gi|374820750|gb|EHR84826.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU120]
gi|374827415|gb|EHR91277.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU123]
gi|374827731|gb|EHR91592.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU125]
gi|374831297|gb|EHR95039.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU126]
gi|374837336|gb|EHS00902.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU127]
gi|383361044|gb|EID38427.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-250]
gi|383362461|gb|EID39813.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-K]
gi|394235059|gb|EJD80633.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM095]
gi|394236340|gb|EJD81874.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM088]
gi|394237678|gb|EJD83164.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM087]
gi|394241385|gb|EJD86799.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM067]
gi|394249425|gb|EJD94638.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM049]
gi|394265989|gb|EJE10635.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM020]
gi|394266668|gb|EJE11293.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM021]
gi|394269967|gb|EJE14490.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM018]
gi|394283592|gb|EJE27757.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH05005]
gi|394289947|gb|EJE33817.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH08001]
gi|394291586|gb|EJE35384.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH04008]
gi|394292509|gb|EJE36251.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH05001]
gi|394294181|gb|EJE37867.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH06004]
gi|394297584|gb|EJE41181.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH05003]
gi|394299172|gb|EJE42723.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH04003]
gi|394302306|gb|EJE45754.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH051668]
gi|394304255|gb|EJE47662.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIH051475]
gi|406656997|gb|EKC83390.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
epidermidis AU12-03]
Length = 514
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 257/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLSLYDDVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGIYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VL EG +KK + L G +D+ V F
Sbjct: 442 SQYEGKIVTVLCEGSSKKDENV-LAGYTDKNKLVNF 476
>gi|417653280|ref|ZP_12303014.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21193]
gi|417797253|ref|ZP_12444451.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21305]
gi|448743364|ref|ZP_21725273.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
KT/Y21]
gi|329733662|gb|EGG69990.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21193]
gi|334267301|gb|EGL85765.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21305]
gi|445563293|gb|ELY19455.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
KT/Y21]
Length = 514
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 253/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I+K GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILKALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|420199076|ref|ZP_14704760.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM031]
gi|394272762|gb|EJE17212.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM031]
Length = 514
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 257/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDIDE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLSLYDDVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGIYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VL EG +KK + L G +D+ V F
Sbjct: 442 SQYEGKIVTVLCEGSSKKDENV-LAGYTDKNKLVNF 476
>gi|332982488|ref|YP_004463929.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mahella australiensis
50-1 BON]
gi|332700166|gb|AEE97107.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Mahella australiensis
50-1 BON]
Length = 443
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 245/445 (55%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + I+ + GY E A++I NTC +R++AE +V+ +
Sbjct: 10 TYGCQMNEHDSEKMAGILSDMGY-EWTEDKAGADIILFNTCCVREHAEQRVYGNIGMLKP 68
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK+ +P I+ V GCM ++ + K+ VD++ G +LP+
Sbjct: 69 LKQ-------------VNPDLIIGVCGCMMQQEGMAQKLAQTFPFVDIIFGTHNLNELPK 115
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L++E + + + + + + P+R + V+A+V+VM GCNN C++CIVP+ RGR
Sbjct: 116 LIDEAKASRFTVVDIHEQDHEFDESMPIR-RASKVSAWVTVMYGCNNFCTYCIVPYVRGR 174
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
E SR + IV EV EL +G KE+TLLGQNVNSY S +++VE
Sbjct: 175 EHSRRPDDIVNEVKELADQGYKEITLLGQNVNSYGKDS--DEKVE--------------- 217
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
FADLL L R R+T+ HPKD D L+Y MRD VC +HLP Q+G
Sbjct: 218 --------FADLLRMLDDIEGVERIRFTTSHPKDLSDNLIYAMRDCKKVCHQLHLPVQSG 269
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L RM R YT+E YL+LV+KI+ IPD+ LS+D I GF GET+E+ DTL +++
Sbjct: 270 STRILRRMNRHYTKEGYLELVEKIKANIPDIALSTDIIVGFPGETDEDFEDTLDVVRRAQ 329
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
YD+AY F YS R T A + D P E+KQ+RL LI+ T + G V VL
Sbjct: 330 YDLAYTFIYSKRSGTPAAK-LEDPTPREIKQQRLQRLIDLQTAITREKNQRLNGAVVEVL 388
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEGP++ +++G++ V F
Sbjct: 389 VEGPSRNGK-GQMMGRTTGNKVVNF 412
>gi|373857373|ref|ZP_09600115.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus sp. 1NLA3E]
gi|372453023|gb|EHP26492.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus sp. 1NLA3E]
Length = 514
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 260/450 (57%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I + GY V E+A VI +NTCAIR+ AE+KV+ +
Sbjct: 70 KFYIRTYGCQMNEHDTEVMAGICLSLGYQPTDTV-EDANVILLNTCAIRENAENKVFGEI 128
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK+E + ++ G V GCM+ E + +KIL +D++ G
Sbjct: 129 GHLKVLKKE-RPDLLLG-----------VCGCMSQEESVVNKILSKHPHIDMIFGTHNIH 176
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L+E ++ + + S E + P ++ + ++ A+V++M GC+ C++CIVPF
Sbjct: 177 RLPNILQEAYMSKEMVVEVWSKEGDVIENLP-KVRRGNIKAWVNIMYGCDKFCTYCIVPF 235
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEG 314
TRG+ERSR E I++EV +L +G +E+TLLGQNVN+Y D + M N+ L
Sbjct: 236 TRGKERSRRPEDIIQEVRQLAAQGYQEITLLGQNVNAYGKDLTEM--------NYGLG-- 285
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
N M +++ MG+ R R+++ HP+DF D L+ ++ + N+ ++IHL
Sbjct: 286 -NLMDEIRLMGVP---------------RIRFSTSHPRDFDDHLIKVLAKKGNLMEHIHL 329
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ VL+ M R YTRE YL+LVQKI+ IPDV L++D I G+ ETEE+ +T++L
Sbjct: 330 PVQSGSTDVLKIMARKYTREQYLELVQKIKAAIPDVTLTTDIIVGYPNETEEQFEETMSL 389
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG++ AY F YS RE T A + + D+VP EVK+ RL L E + + G
Sbjct: 390 VREVGFEAAYTFIYSPREGTPAAKMH-DNVPLEVKKERLQRLNTLVNEQSAEAMKQYKGQ 448
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K + L G + + V F
Sbjct: 449 VVEVLVEGVSKNNSEV-LAGYTRKSKLVNF 477
>gi|229891223|sp|B2SW86.2|MIAB_XANOP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
Length = 484
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 243/450 (54%), Gaps = 35/450 (7%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ + E+ + PE A+V+ +NTC+IR+ A+ KV+
Sbjct: 35 RGKLYIKTHGCQMNEYDSAKMADVLAASEGLELTDNPEEADVVLVNTCSIREKAQEKVFS 94
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L WK A G+ P I V GC+A + + I+ VD+V GP
Sbjct: 95 QLG-------RWKALKAGGK-----PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 142
Query: 196 DLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L+ + G+ ++ E + + R S AFVS+M GC+ CSFC+VP
Sbjct: 143 RLPELIRARRESGKSQVDISFPEIEKFDRLPEPRAEGPS--AFVSIMEGCSKYCSFCVVP 200
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y G + +P L
Sbjct: 201 YTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAG-DPAQYADLGLL 259
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
++ +++ +G R R+T+ HP +F D L+ RD P + +HL
Sbjct: 260 IRTIAQIEGIG-----------------RIRFTTSHPLEFSDSLVDAYRDVPQLANCLHL 302
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GETE + T+ L
Sbjct: 303 PVQAGSDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKL 362
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG+D ++ F YS R T A + DD PE VKQ RL L S VG+
Sbjct: 363 IEDVGFDQSFSFVYSRRPGTPAS-DLQDDTPETVKQARLARLQAHISAHAASISQSMVGS 421
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLVEGP+++ P+ EL GKS+ V F
Sbjct: 422 VQRVLVEGPSRRDPN-ELTGKSENMRPVNF 450
>gi|420185401|ref|ZP_14691493.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM040]
gi|394254387|gb|EJD99356.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM040]
Length = 514
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 257/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GY+ ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYNATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RIRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLSLYDNVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGIYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VL EG +KK + L G +D+ V F
Sbjct: 442 SQYEGKVVTVLCEGSSKKDENV-LAGYTDKNKLVNF 476
>gi|420212653|ref|ZP_14718001.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM001]
gi|394279614|gb|EJE23920.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis NIHLM001]
Length = 514
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 258/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLLGQNVNSY D G++ E+
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLGQNVNSYGKDIEGLDYEL------ 283
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 284 -------------------GDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLSLYDDVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGIYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VL EG +KK + L G +D+ V F
Sbjct: 442 SQYEGKIVTVLCEGSSKKDENV-LAGYTDKNKLVNF 476
>gi|222055271|ref|YP_002537633.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter
daltonii FRC-32]
gi|221564560|gb|ACM20532.1| RNA modification enzyme, MiaB family [Geobacter daltonii FRC-32]
Length = 440
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 165/432 (38%), Positives = 247/432 (57%), Gaps = 45/432 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y +T+GCQMNV+D E + ++KN GY N A++I +NTC++R AE KV+ L
Sbjct: 7 LYLQTFGCQMNVSDSEKIAGLLKNIGYRPT-NDSSLADLIILNTCSVRARAEEKVYNHLV 65
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ LKR+ PKI+ V GC+A++ +++L +D V G
Sbjct: 66 QYKGLKRKR--------------PKILIGVGGCVAQQEGERLLLNIPHLDFVFGTHNLHL 111
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+ + G++ T ++ D+ PV S N V+ FV+VM+GC+N CS+CIVP+
Sbjct: 112 LPELVLSAEKGERQAETDFIDNDSRLDLFPVDNSTNGVSRFVTVMQGCDNFCSYCIVPYV 171
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE SR I++E+ +L +GVKEVTLLGQNVNSY G++ + E
Sbjct: 172 RGREISRRSADILEEISQLAAKGVKEVTLLGQNVNSY----GLKSDGE------------ 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
L F LL ++S E P + R R+T+ HPKDF +L+ + P +CK++HLP
Sbjct: 216 ---------LDFVTLLRQVS-EIPGIERLRFTTSHPKDFSRQLIDCFAEMPKLCKHVHLP 265
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
AQ G++AVL M RGY+RE YL L+ +++ + P + ++ D I GF GETE + +TL+L+
Sbjct: 266 AQAGSNAVLSAMNRGYSREEYLSLIGQLKTVSPGIQITGDIIVGFPGETETDFQETLSLL 325
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V Y + F YS R T A Y D + ++ KQ RL L+ R+ T + S G+V
Sbjct: 326 EEVRYTDVFSFIYSKRPETKAA-GYTDHISQKEKQMRLDRLLAMQRKITLENNRSFEGSV 384
Query: 496 QLVLVEGPNKKA 507
Q VLVEG +++
Sbjct: 385 QEVLVEGESRRG 396
>gi|70726621|ref|YP_253535.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
haemolyticus JCSC1435]
gi|123734986|sp|Q4L5Z6.1|MIAB_STAHJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|68447345|dbj|BAE04929.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 514
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 259/454 (57%), Gaps = 46/454 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I++ GY+ ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILQALGYTATEDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ + LK+ ++ I V GCM+ E + +KIL + + VD++ G
Sbjct: 124 FSEIGNLKHLKK------------NRPEALIGVCGCMSQEESVVNKILKSYQNVDMIFGT 171
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +LEE + + + S E + P ++ + S A+V++M GC+ C++C
Sbjct: 172 HNIHKLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVREGSTKAWVNIMYGCDKFCTYC 230
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVPFTRG+ERSR E I++EV L ++G KE+TLLGQNVNSY
Sbjct: 231 IVPFTRGKERSRRPEDIIEEVRGLARDGYKEITLLGQNVNSYGKD--------------- 275
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+K + DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 276 ---------IKDLEYGLGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNIVP 324
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+GN+AVL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+ +
Sbjct: 325 HIHLPVQSGNNAVLKIMGRKYTRESYLDLVNRIKKSIPNVALTTDIIVGYPNETEEQFEE 384
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL+L V ++ AY + YS R+ T A + D+VPE+VK+ RL L + + + +
Sbjct: 385 TLSLYDEVQFEHAYTYLYSQRDGTPAAK-MKDNVPEDVKKARLQRLNKKVGHYSEKAMNQ 443
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VL EG +KK DT L G +++ V F
Sbjct: 444 YEGKTVTVLCEGSSKK-DDTVLAGYTEKNKLVNF 476
>gi|294669853|ref|ZP_06734912.1| hypothetical protein NEIELOOT_01746 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308246|gb|EFE49489.1| hypothetical protein NEIELOOT_01746 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 440
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 244/436 (55%), Gaps = 44/436 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNA-GYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +LS+++ G E + P+ A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLSVLEEEHGGIEQVAEPDEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K P I+ V GC+A + + I+ VD+V GP
Sbjct: 63 LGRVRPLK-------------DKKPDLIIGVAGCVASQEGEAIVKRAPFVDIVFGPQTLH 109
Query: 196 DLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LPRL+++ + G ++ E + + P R+ S AF+S+M GC+ CSFC+VP
Sbjct: 110 RLPRLIDDKKETGLPQVDISFPEIEKFDHLPPARVDGGS--AFISIMEGCSKYCSFCVVP 167
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y G+ + E
Sbjct: 168 YTRGEEFSRPLNDVLTEIAGLAQQGVKEINLLGQNVNAYR---GLMDDGE---------- 214
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++H
Sbjct: 215 ---VCD-------FATLL-RIVHEIPGIERIRFTTSHPREFSDAIIECYRDLPKLVSHLH 263
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL
Sbjct: 264 LPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLK 323
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L+K + +D++++F YS R T A N DD P E K RRL L E T + + VG
Sbjct: 324 LVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTMVG 382
Query: 494 TVQLVLVEGPNKKAPD 509
TVQ LVEG +KK P+
Sbjct: 383 TVQRCLVEGVSKKDPE 398
>gi|188576122|ref|YP_001913051.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188520574|gb|ACD58519.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 460
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 243/450 (54%), Gaps = 35/450 (7%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ + E+ + PE A+V+ +NTC+IR+ A+ KV+
Sbjct: 11 RGKLYIKTHGCQMNEYDSAKMADVLAASEGLELTDNPEEADVVLVNTCSIREKAQEKVFS 70
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L WK A G+ P I V GC+A + + I+ VD+V GP
Sbjct: 71 QLG-------RWKALKAGGK-----PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 118
Query: 196 DLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L+ + G+ ++ E + + R S AFVS+M GC+ CSFC+VP
Sbjct: 119 RLPELIRARRESGKSQVDISFPEIEKFDRLPEPRAEGPS--AFVSIMEGCSKYCSFCVVP 176
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y G + +P L
Sbjct: 177 YTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAG-DPAQYADLGLL 235
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
++ +++ +G R R+T+ HP +F D L+ RD P + +HL
Sbjct: 236 IRTIAQIEGIG-----------------RIRFTTSHPLEFSDSLVDAYRDVPQLANCLHL 278
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GETE + T+ L
Sbjct: 279 PVQAGSDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKL 338
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG+D ++ F YS R T A + DD PE VKQ RL L S VG+
Sbjct: 339 IEDVGFDQSFSFVYSRRPGTPAS-DLQDDTPETVKQARLARLQAHISAHAASISQSMVGS 397
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLVEGP+++ P+ EL GKS+ V F
Sbjct: 398 VQRVLVEGPSRRDPN-ELTGKSENMRPVNF 426
>gi|421862951|ref|ZP_16294653.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379482|emb|CBX21848.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 442
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 168/438 (38%), Positives = 248/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + P++A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQPDDADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIAGLAQQGVKEINLLGQNVNAYRG------EMENG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
VGTVQ LVEG +KK PD
Sbjct: 381 VGTVQRCLVEGISKKDPD 398
>gi|319649479|ref|ZP_08003635.1| YmcB protein [Bacillus sp. 2_A_57_CT2]
gi|317398641|gb|EFV79323.1| YmcB protein [Bacillus sp. 2_A_57_CT2]
Length = 515
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 258/460 (56%), Gaps = 50/460 (10%)
Query: 72 EVHSQG---RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDY 128
E H G + Y TYGCQMN +D E++ I GY +V E+A VI +NTCAIR+
Sbjct: 61 EFHGMGNGRKFYIRTYGCQMNEHDTEVMAGIFLGLGYEHTESV-EDANVILLNTCAIREN 119
Query: 129 AEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMV 185
AE+KV+ L + LK+E +P ++ V GCM+ E + +KIL V
Sbjct: 120 AENKVFGELGHLKHLKKE-------------NPDLLIGVCGCMSQEESVVNKILKTYNQV 166
Query: 186 DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCN 245
D++ G LP +L+E ++ + + S E + P ++ + ++ A+V++M GC+
Sbjct: 167 DMIFGTHNIHRLPNILQEAYMSKEMVIEVWSKEGDVIENLP-KVRRGNIKAWVNIMYGCD 225
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
C++CIVP+TRG+ERSR E I++EV +L +G +E+TLLGQNVN+Y
Sbjct: 226 KFCTYCIVPYTRGKERSRRPEDIIQEVRQLAAQGYQEITLLGQNVNAY------------ 273
Query: 306 GANWRLSEGFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRD 364
G ++ + M DL+D + ++ P R R+T+ HP+DF D L+ ++
Sbjct: 274 GKDF------------EDMNYGLGDLMDEMRKIDIP--RVRFTTSHPRDFDDHLIEVLAK 319
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
N+ ++IHLP Q+G++ VL+ M R YTRE YL+LV+KI+ IP+ ++D I G+ ET
Sbjct: 320 GGNLVEHIHLPVQSGSTDVLKIMARKYTREQYLELVRKIKAAIPEATFTTDIIVGYPNET 379
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
EE+ +T++L + VG++ AY F YS RE T A + VD+VP EVK+ RL L E +
Sbjct: 380 EEQFEETISLYREVGFEAAYTFIYSPREGTPAAK-MVDNVPMEVKKERLQRLNAVVNELS 438
Query: 485 GQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G VLVEG +K P+ L G + + V F
Sbjct: 439 AEAMKKYKGQTVEVLVEGESKNNPEI-LAGYTRKNKLVNF 477
>gi|228475022|ref|ZP_04059750.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus hominis
SK119]
gi|228271007|gb|EEK12395.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus hominis
SK119]
Length = 514
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 172/457 (37%), Positives = 262/457 (57%), Gaps = 52/457 (11%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I++ Y ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILQALDYQATDDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ + LK+ + + I V GCM+ E + +KIL + + VD++ G
Sbjct: 124 FSEIGNLKHLKKNRPETL------------IGVCGCMSQEESVVNKILKSYQNVDMIFGT 171
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +LEE + + + S E + P ++ + S A+V++M GC+ C++C
Sbjct: 172 HNIHKLPEILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGSTKAWVNIMYGCDKFCTYC 230
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVPFTRG+ERSR + I++EV EL +EG KE+TLLGQNVNSY
Sbjct: 231 IVPFTRGKERSRRPQDIIEEVRELAREGYKEITLLGQNVNSYGKD--------------- 275
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+K + +DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 276 ---------IKDLDYGLSDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNIVP 324
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+GN+AVL+ M R Y+RE+YLDLV +I++ IP+V L++D I G+ ETEE+ +
Sbjct: 325 HIHLPVQSGNNAVLKIMGRKYSRESYLDLVDRIKEAIPNVALTTDIIVGYPNETEEQFEE 384
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL---IEAFRESTGQC 487
TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + E Q
Sbjct: 385 TLSLYDEVQFEHAYTYLYSQRDGTPAAK-MKDNVPTEVKKDRLQRLNKKVGQYSEKAMQN 443
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Y+ QV T VL EG +KK +T L G +++ V F
Sbjct: 444 YEGQVVT---VLCEGTSKK-DETVLAGYTEKNKLVNF 476
>gi|320103836|ref|YP_004179427.1| MiaB family RNA modification protein [Isosphaera pallida ATCC
43644]
gi|319751118|gb|ADV62878.1| RNA modification enzyme, MiaB family [Isosphaera pallida ATCC
43644]
Length = 633
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 167/453 (36%), Positives = 244/453 (53%), Gaps = 52/453 (11%)
Query: 67 SATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIR 126
SA GS+ R++ ET GCQMNV D E+V+ ++ GY E+ + P+ A+ I NTC++R
Sbjct: 35 SAPGSDAPPPRRLFIETVGCQMNVLDSELVVERLRRDGY-ELTSDPQQADTILFNTCSVR 93
Query: 127 DYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMV 185
+AE KV+ L LK E HP I VLGCMA++ + +IL V
Sbjct: 94 QHAEDKVYSALGRLRGLKAE-------------HPEVTIGVLGCMAQKDQKRILQRAPHV 140
Query: 186 DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEET----------YADISPVR---ISKN 232
D++ GP +P L+ G++ + T SL T + + P R K
Sbjct: 141 DLMVGPGQLEVVPELIARAKNGERKL-TAFSLPRTAGSRDRVAASFNEFDPARRKEARKV 199
Query: 233 SVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNS 292
AFV +M GC+ C++CIVP RG E+SR + IV+EV L +G +EVTLLGQ VNS
Sbjct: 200 PFQAFVRIMMGCDKFCTYCIVPSVRGPEQSRHPDEIVEEVRNLVDQGTREVTLLGQTVNS 259
Query: 293 YNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPK 352
Y + + R++ FADLL +L R ++ + +P
Sbjct: 260 YRHKT---------PDGRITS--------------FADLLAKLHDIDGLRRIKFVTNYPN 296
Query: 353 DFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGL 412
D DELL +RD P + +Y+H+PAQ+G VL+RM+RGYT Y D++ +IR+ +P+ +
Sbjct: 297 DMTDELLAAIRDLPRISRYLHVPAQSGCDQVLKRMKRGYTVGLYNDMMARIRETLPEAAV 356
Query: 413 SSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRR 472
+SDFI GFCGETE T+ L++ + +++F YS RE T A+ + DDVPE VK+RR
Sbjct: 357 TSDFIVGFCGETEASFQKTVDLVRRWRFKNSFIFKYSPREGTKAYNLFPDDVPEAVKRRR 416
Query: 473 LTELIEAFRESTGQCYDSQVGTVQLVLVEGPNK 505
EL+ + + VG +LVEGP+K
Sbjct: 417 NNELLAVQNAIALEDQQAFVGRTVEILVEGPSK 449
>gi|418559142|ref|ZP_13123688.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21252]
gi|371975433|gb|EHO92727.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21252]
Length = 514
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 254/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + + G +
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQIVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|429729049|ref|ZP_19263737.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Peptostreptococcus
anaerobius VPI 4330]
gi|429146198|gb|EKX89258.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Peptostreptococcus
anaerobius VPI 4330]
Length = 482
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 258/446 (57%), Gaps = 45/446 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMN +D E+++S++++ GYS ++ + A+++ NTCA+R+ AE KV+ L +
Sbjct: 45 TFGCQMNEHDSEMLISMLESIGYSRALS-EDTADIVIYNTCAVRENAELKVYGNLGHLKS 103
Query: 143 LKREWKKNVATGRSQSKHPP-KIVVLGCM--AERLKDKILDADKMVDVVCGPDAYRDLPR 199
+KR K P KIVV GCM E + ++I + VD+V G P
Sbjct: 104 IKR-------------KRPDMKIVVCGCMMQQEHIVEEIKAKHQHVDLVFGTHNLYKFPE 150
Query: 200 LLEEVDYGQKGINTLLSLE-ETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
LL K + + ++ E + R K + AFV++M GCNN C++CIVP+TRG
Sbjct: 151 LLASTFESDKILVDVWDIDGEVVEGLKSNR--KFDIKAFVNIMYGCNNFCTYCIVPYTRG 208
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERSR + I+ E+++L K GV+EVTLLGQNVNSY T +E+ + R+S
Sbjct: 209 RERSRKPKDIISEIEDLVKGGVREVTLLGQNVNSYGKT--LEE------DDRIS------ 254
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
FADLL R++ R R+ S HPKD D+++Y MRD VC+++HLP Q
Sbjct: 255 ---------FADLLRRVNEIEGLERIRFMSSHPKDISDDVIYAMRDCKKVCEFLHLPFQV 305
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++++L++M R Y++E YL++++K ++ IPD+ S+D + GF GET+E+ DT+ + + V
Sbjct: 306 GSTSLLKKMNRHYSKEDYLNIIKKAKEEIPDLAFSTDIMIGFPGETDEDVQDTIDICEEV 365
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
+D A+ F YS R+ T A + D +PEE+K +R +++ +G+ G + V
Sbjct: 366 RFDTAFTFIYSKRQGTPAAK-MEDQIPEEIKHKRFDKVLSVINRISGEKNHLYDGKIVEV 424
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +KK + GKS + V F
Sbjct: 425 LVEGASKKDSSI-MTGKSRQNKTVNF 449
>gi|314936546|ref|ZP_07843893.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus hominis
subsp. hominis C80]
gi|313655165|gb|EFS18910.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus hominis
subsp. hominis C80]
Length = 514
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 172/457 (37%), Positives = 261/457 (57%), Gaps = 52/457 (11%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I++ Y ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILQALDYQATDDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ + LK+ + + I V GCM+ E + +KIL + + VD++ G
Sbjct: 124 FSEIGNLKHLKKNRPETL------------IGVCGCMSQEESVVNKILKSYQNVDMIFGT 171
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +LEE + + + S E + P ++ + S A+V++M GC+ C++C
Sbjct: 172 HNIHKLPEILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGSTKAWVNIMYGCDKFCTYC 230
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVPFTRG+ERSR + I++EV EL +EG KE+TLLGQNVNSY
Sbjct: 231 IVPFTRGKERSRRPQDIIEEVRELAREGYKEITLLGQNVNSYGKD--------------- 275
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+K + DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 276 ---------IKDLDYGLGDLLEDISNIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNIVP 324
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+GN+AVL+ M R Y+RE+YLDLV +I++ IP+V L++D I G+ ETEE+ +
Sbjct: 325 HIHLPVQSGNNAVLKIMGRKYSRESYLDLVDRIKEAIPNVALTTDIIVGYPNETEEQFEE 384
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL---IEAFRESTGQC 487
TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + E Q
Sbjct: 385 TLSLYDEVQFEHAYTYLYSQRDGTPAAK-MKDNVPTEVKKDRLQRLNKKVGQYSEKAMQN 443
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Y+ QV T VL EG +KK +T L G +++ V F
Sbjct: 444 YEGQVVT---VLCEGTSKK-DETVLAGYTEKNKLVNF 476
>gi|418620502|ref|ZP_13183306.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus hominis
VCU122]
gi|374822632|gb|EHR86652.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus hominis
VCU122]
Length = 514
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 172/457 (37%), Positives = 261/457 (57%), Gaps = 52/457 (11%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I++ Y ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILQALDYQATDDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ + LK+ + + I V GCM+ E + +KIL + + VD++ G
Sbjct: 124 FSEIGNLKHLKKNRPETL------------IGVCGCMSQEESVVNKILKSYQNVDMIFGT 171
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +LEE + + + S E + P ++ + S A+V++M GC+ C++C
Sbjct: 172 HNIHKLPEILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGSTKAWVNIMYGCDKFCTYC 230
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVPFTRG+ERSR + I++EV EL +EG KE+TLLGQNVNSY
Sbjct: 231 IVPFTRGKERSRRPQDIIEEVRELAREGYKEITLLGQNVNSYGKD--------------- 275
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+K + DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 276 ---------IKDLDYGLGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNIVP 324
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+GN+AVL+ M R Y+RE+YLDLV +I++ IP+V L++D I G+ ETEE+ +
Sbjct: 325 HIHLPVQSGNNAVLKIMGRKYSRESYLDLVDRIKEAIPNVALTTDIIVGYPNETEEQFEE 384
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL---IEAFRESTGQC 487
TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + E Q
Sbjct: 385 TLSLYDEVQFEHAYTYLYSQRDGTPAAK-MKDNVPTEVKKDRLQRLNKKVGQYSEKAMQN 443
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Y+ QV T VL EG +KK +T L G +++ V F
Sbjct: 444 YEGQVVT---VLCEGTSKK-DETVLAGYTEKNKLVNF 476
>gi|359797982|ref|ZP_09300561.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Achromobacter
arsenitoxydans SY8]
gi|359364172|gb|EHK65890.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Achromobacter
arsenitoxydans SY8]
Length = 480
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 262/483 (54%), Gaps = 44/483 (9%)
Query: 45 IAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMK-NA 103
+ ++SL + + D PA+ S+ T V S ++Y T+GCQMN D + + +++ +
Sbjct: 1 MQETSLKRAGNVRDGGPAALPSADTS--VGSPRKLYIRTFGCQMNEYDSDKMADVLREDQ 58
Query: 104 GYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPK 163
G E+ + PE A+VI NTC++R+ A+ KV+ L LK+ N+ G
Sbjct: 59 GGLELTDNPEEADVILFNTCSVREKAQEKVFSDLGRVQHLKK-TNPNLVIG--------- 108
Query: 164 IVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEV-DYGQKGINTLLSLEETYA 222
V GC+A + + I+ VDVV GP LP L++ D G+ ++ E +
Sbjct: 109 --VGGCVASQEGEAIVKRAPYVDVVFGPQTLHRLPDLIKRRRDEGRSQVDISFPEIEKFD 166
Query: 223 DISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKE 282
++ P R+ + TAFVS+M GC+ CSFC+VP+TRG E SRP + ++ EV +L +GVKE
Sbjct: 167 NMPPPRV--DGATAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFDDVLIEVADLADQGVKE 224
Query: 283 VTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM 342
VTLLGQNVN+Y E+ FA LL+ + E P +
Sbjct: 225 VTLLGQNVNAYRGRMADSDEIA----------------------DFAMLLEYVH-EIPGI 261
Query: 343 -RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQ 401
R RYT+ HPK+ ++ P + ++HLP Q G+ VL M+RGYT + +V+
Sbjct: 262 ERIRYTTSHPKEMTQRMVDAYARLPKLVSFLHLPVQAGSDRVLAAMKRGYTTLEFKSVVR 321
Query: 402 KIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYV 461
++R PD+ LSSDFI GF GETEE+ T+ L++ VG+D ++ F YS R T A +
Sbjct: 322 RLRAARPDLTLSSDFIVGFPGETEEDFEKTMKLIEDVGFDTSFSFVYSRRPGTPAA-DLT 380
Query: 462 DDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHR 521
DD P++VK RRL L E + VGT Q +LVEGP+++ P+ EL+G+++
Sbjct: 381 DDTPQDVKLRRLQRLQALINEQAATIARNMVGTRQRLLVEGPSRRDPN-ELMGRTENNRI 439
Query: 522 VAF 524
V F
Sbjct: 440 VNF 442
>gi|329923527|ref|ZP_08279002.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp. HGF5]
gi|328941235|gb|EGG37532.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp. HGF5]
Length = 519
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 255/445 (57%), Gaps = 46/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + +++ GY + + A++I +NTCAIR+ AE KV+ L +
Sbjct: 80 TYGCQMNEHDSETIKGLLELMGYRATED-RKQADIILLNTCAIRENAEDKVFGELGHLKH 138
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPRL 200
LK E K ++ G V GCM+ E + ++IL VD++ G LP L
Sbjct: 139 LKTE-KPDMLLG-----------VCGCMSQEESVVNRILQKHGFVDLIFGTHNVHRLPHL 186
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
++E + ++ + + S E + P + + + +V++M GC+ C++CIVP+TRG+E
Sbjct: 187 IQEALFSKEMVVEVWSKEGDIVENLPKK--REGLRGWVNIMYGCDKFCTYCIVPYTRGKE 244
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
RSR E ++ EV EL ++G KE+TLLGQNVN+Y G ++
Sbjct: 245 RSRRPEDVIAEVRELARQGYKEITLLGQNVNAY------------GKDF----------- 281
Query: 321 VKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+ + RF DL+D + ++ P R R+T+ HP+DF D L+ ++ N+ ++IHLP Q+G
Sbjct: 282 -EDIQYRFGDLMDDIHKIDIP--RVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQSG 338
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S VL++M R YTRE YL+L KI++ IP+V ++D I GF GET+E+ +TL+L++ VG
Sbjct: 339 SSQVLKKMSRKYTRETYLELAHKIKKAIPNVAFTTDIIVGFPGETDEQFEETLSLVREVG 398
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
YD AY F YS RE T A D+VP EVK RL L A E + + D +G+ VL
Sbjct: 399 YDSAYTFIYSPREGTPA-AVMEDNVPMEVKSERLQRLNAAINEYSRKSNDRLLGSTVEVL 457
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +K D+ L G++ V F
Sbjct: 458 VEGVSKNN-DSMLSGRTRTNKLVHF 481
>gi|349573718|ref|ZP_08885691.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria shayeganii 871]
gi|348014674|gb|EGY53545.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria shayeganii 871]
Length = 443
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 170/437 (38%), Positives = 246/437 (56%), Gaps = 47/437 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ T+GCQMN D E +LS++ ++ E A++I NTC++R+ A+ KV+ L
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLSVLAEGDDLVQVSEAEEADIILFNTCSVREKAQEKVFSDL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
LK +K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 GRIKPLK-------------AKNPNLIIGVGGCVASQEGEAIVKRAPYVDVVFGPQTLHR 109
Query: 197 LPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP+++ VD G++ + +S E + + P R+ S AFVS+M GC+ CSFC+V
Sbjct: 110 LPQMI--VDKETTGLSQVDISFPEIEKFDHLPPARVEGGS--AFVSIMEGCSKYCSFCVV 165
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y GA + +
Sbjct: 166 PYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYR-----------GA---MDD 211
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
G +C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++
Sbjct: 212 G--GICD-------FATLL-RIVHEIPGIERMRFTTSHPREFSDAIIECYRDLPKLVSHL 261
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL
Sbjct: 262 HLPVQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTL 321
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L+K V +D++++F YS R T A N DD P E K RRL L E T + S +
Sbjct: 322 KLVKDVAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQSML 380
Query: 493 GTVQLVLVEGPNKKAPD 509
GTVQ LVEG +KK PD
Sbjct: 381 GTVQRCLVEGISKKDPD 397
>gi|418563261|ref|ZP_13127702.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21262]
gi|371971386|gb|EHO88787.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21262]
Length = 514
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 252/446 (56%), Gaps = 45/446 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+ EV EL +EG KE+TLLGQNVNSY
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKD----------------------- 275
Query: 320 KVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
++ + DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q+
Sbjct: 276 -LQNIKYDLGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQS 332
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL V
Sbjct: 333 GNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEV 392
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
G++ AY + YS R+ T A + D+VP +VK+ RL L + + G V
Sbjct: 393 GFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVTV 451
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
L EG +KK D L G +D+ V F
Sbjct: 452 LCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|82750892|ref|YP_416633.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus RF122]
gi|123727480|sp|Q2YXS2.1|MIAB_STAAB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|82656423|emb|CAI80843.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 514
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 253/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|379722815|ref|YP_005314946.1| protein MiaB [Paenibacillus mucilaginosus 3016]
gi|386725590|ref|YP_006191916.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
mucilaginosus K02]
gi|378571487|gb|AFC31797.1| MiaB [Paenibacillus mucilaginosus 3016]
gi|384092715|gb|AFH64151.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
mucilaginosus K02]
Length = 490
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 254/446 (56%), Gaps = 46/446 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E + +++ GY + A++I +NTCA+R+ AE KV+ L +
Sbjct: 54 QTYGCQMNEHDTETIKGLLEGLGYRATED-RRQADIILLNTCAVRENAEDKVFGELGHLK 112
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK E K ++ G V GCM+ E ++IL VD++ G LP
Sbjct: 113 HLKTE-KPSLLLG-----------VCGCMSQEEATVNRILKKHPFVDLIFGTHNIHRLPF 160
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L++E + ++ + + S E + P + + + A+V++M GC+ C++CIVP+TRG+
Sbjct: 161 LVKEAMFSKEMVIEVWSKEGDIIENLPKK--REGLKAWVNIMYGCDKFCTYCIVPYTRGK 218
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E ++ EV EL ++G KEV LLGQNVN+Y G ++
Sbjct: 219 ERSRRPEDVIAEVRELARQGYKEVMLLGQNVNAY------------GKDF---------- 256
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
+ + RF DL+D + ++ P R R+T+ HP+DF D L+ ++ + N+ ++IHLP Q+
Sbjct: 257 --EDLEYRFGDLMDDIRKIDIP--RVRFTTSHPRDFDDHLIEVLAQKGNLMEHIHLPVQS 312
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ VL+RM R YTRE YL+LV KI+ IPDV L+SDFI GF GETEE+ +T+ L++ V
Sbjct: 313 GSNEVLKRMSRKYTREQYLELVAKIKAAIPDVVLTSDFIVGFPGETEEQFEETVALVREV 372
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
GYD A+ F YS RE T A D VP++VK RRL L + E+ + + +G V
Sbjct: 373 GYDFAFTFIYSPREGTPA-AGMEDTVPQDVKSRRLRRLNDVLSENMKRSNEKLLGQTVEV 431
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +K D L G++ V F
Sbjct: 432 FVEGVSKNN-DRVLAGRTRTNKLVHF 456
>gi|379021003|ref|YP_005297665.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus aureus subsp.
aureus M013]
gi|386728979|ref|YP_006195362.1| tRNA 2-methylthioadenosine synthase [Staphylococcus aureus subsp.
aureus 71193]
gi|387602570|ref|YP_005734091.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus ST398]
gi|404478634|ref|YP_006710064.1| hypothetical protein C248_1326 [Staphylococcus aureus 08BA02176]
gi|418310560|ref|ZP_12922099.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21331]
gi|418950186|ref|ZP_13502382.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-160]
gi|418980640|ref|ZP_13528416.1| tRNA 2-methylthioadenosine synthase [Staphylococcus aureus subsp.
aureus DR10]
gi|283470508|emb|CAQ49719.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus ST398]
gi|359830312|gb|AEV78290.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus aureus subsp.
aureus M013]
gi|365236612|gb|EHM77499.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21331]
gi|375377559|gb|EHS81018.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-160]
gi|379991615|gb|EIA13084.1| tRNA 2-methylthioadenosine synthase [Staphylococcus aureus subsp.
aureus DR10]
gi|384230272|gb|AFH69519.1| tRNA 2-methylthioadenosine synthase [Staphylococcus aureus subsp.
aureus 71193]
gi|404440123|gb|AFR73316.1| hypothetical protein C248_1326 [Staphylococcus aureus 08BA02176]
Length = 514
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 253/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|417901652|ref|ZP_12545528.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21266]
gi|341845491|gb|EGS86693.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21266]
Length = 514
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 253/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|28210988|ref|NP_781932.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
tetani E88]
gi|75542486|sp|Q895H1.1|MIAB_CLOTE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|28203427|gb|AAO35869.1| miaB protein [Clostridium tetani E88]
Length = 453
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 253/465 (54%), Gaps = 45/465 (9%)
Query: 63 SEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINT 122
+ + + S+ + +G + ET+GCQMN D E + ++KN GY + A++I NT
Sbjct: 3 NNIVNTIHSDKNQKGTFFIETWGCQMNEEDSEKLSGMLKNIGYKNAED-KNQADIIIFNT 61
Query: 123 CAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCM--AERLKDKIL 179
C +R+ AE KV+ L LK SK+P I+ V GCM E + + I+
Sbjct: 62 CCVRENAELKVYGNLGALKGLK-------------SKNPNLIIAVCGCMMQQEGMAEAII 108
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVS 239
VD++ G P L K I + EE + PV K+S AFV+
Sbjct: 109 KKYPFVDIIFGTHNSYKFPEYLNRAKQEGKSIIEVWDKEEEIVEGIPVD-RKSSTKAFVT 167
Query: 240 VMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGM 299
+M GCNN C++CIVP+ RGRERSR V I KE+ EL K G KE+TLLGQNVNSY
Sbjct: 168 IMYGCNNFCTYCIVPYVRGRERSREVSDIEKEIKELVKSGYKEITLLGQNVNSYG----- 222
Query: 300 EKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELL 359
K++EP + FA+LL ++ R R+ + HPKD ++++
Sbjct: 223 -KDLEPK-------------------VSFAELLRHVNEIEGIERVRFMTSHPKDLTEDVI 262
Query: 360 YIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICG 419
Y +++ +C +IHLP Q+G+S +L++M R Y RE YL+LV KI++ IP+V +++D I G
Sbjct: 263 YAIKECDKLCNHIHLPVQSGSSRILKKMNRYYNREDYLNLVNKIKEEIPNVAITTDIIVG 322
Query: 420 FCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEA 479
F GETEE+ +TL L+K V YD A+ F YS R+ T A+ + + VPE+VK R +L+E
Sbjct: 323 FPGETEEDFNETLELVKEVEYDSAFTFLYSKRKGTPAY-DIEEQVPEDVKHDRFKKLVEV 381
Query: 480 FRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+S + + VLVEG +K + +L G++D V F
Sbjct: 382 VNKSCEKNNKKYQDRIVKVLVEGESKNDKN-KLSGRTDTAKLVNF 425
>gi|426404031|ref|YP_007023002.1| hypothetical protein Bdt_2049 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860699|gb|AFY01735.1| hypothetical protein Bdt_2049 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 453
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 243/430 (56%), Gaps = 47/430 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y TYGCQMNVND E + ++++ + V + P+ A +I IN+C++R+ HKV+ +
Sbjct: 23 VYISTYGCQMNVNDTERMYALLEMQNFVPVAD-PKMASLIIINSCSVREKPVHKVYSEVG 81
Query: 139 YFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ ++KR K+P KI V GC+ ++ K+ ++ M+D V G D L
Sbjct: 82 TYKYMKR-------------KNPDLKIGVGGCVGQQEKENLMKTQPMIDFVFGTDQIDSL 128
Query: 198 PRLLEEVDYGQKG-INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+L+ + G++ +N+ Y + VR V +V++ +GC+N C+FC+VP+T
Sbjct: 129 PQLVAKSFAGERRLVNSRFEHRSPYHIETLVR--NPGVATYVNITKGCDNFCTFCVVPYT 186
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE+SRPV+ I+ ++ L K GVKEVTLLGQNVNSY G++
Sbjct: 187 RGREKSRPVQHILTDIRHLVKRGVKEVTLLGQNVNSYQGDEGID---------------- 230
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN-VCKYIHLP 375
FADLL +++ E R RYT+ HPKDF +L+ +M + + + +YIHLP
Sbjct: 231 -----------FADLLAKVAKETDVERIRYTTSHPKDFNQKLVDVMSEHSSKIMEYIHLP 279
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G++ VLERM R YTRE YL+ + I++ +P+V S+D I GF GETEE+ DTL ++
Sbjct: 280 FQAGSTKVLERMNRNYTREEYLERIAMIQKGLPNVCFSTDIIVGFPGETEEDFQDTLNMV 339
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
VG++ + F+YS R T A + + D +PE+VK RL L + + GT
Sbjct: 340 TEVGFETIFAFSYSPRPFTKAAK-FEDQLPEDVKNERLNRLFDVHEAMAFERVKRYEGTT 398
Query: 496 QLVLVEGPNK 505
VLVE ++
Sbjct: 399 MKVLVENVDR 408
>gi|294500858|ref|YP_003564558.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus megaterium QM
B1551]
gi|384045292|ref|YP_005493309.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Bacillus
megaterium WSH-002]
gi|294350795|gb|ADE71124.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus megaterium QM
B1551]
gi|345442983|gb|AEN88000.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
megaterium WSH-002]
Length = 520
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 173/453 (38%), Positives = 252/453 (55%), Gaps = 44/453 (9%)
Query: 75 SQGR-IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
QGR Y TYGCQMN +D E++ I GY +V E+A VI +NTCAIR+ AE+KV
Sbjct: 74 GQGRKFYIRTYGCQMNEHDTEVMAGIFLGLGYEPTDSV-EDAHVILLNTCAIRENAENKV 132
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ L + LKRE + + I V GCM+ E + +KIL + VD++ G
Sbjct: 133 FGELGHLKALKRERPELL------------IGVCGCMSQEESVVNKILQKHQHVDMIFGT 180
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +L E ++ + + S E + P R K SV A+V++M GC+ C++C
Sbjct: 181 HNIHRLPHILNEAYLAKEMVIEVWSKEGDVIENLP-RARKGSVKAWVNIMYGCDKFCTYC 239
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVP+TRG+ERSR E I++EV L +G KE+TLLGQNVN+Y G ++
Sbjct: 240 IVPYTRGKERSRRPEDIIQEVRHLAAQGYKEITLLGQNVNAY------------GKDF-- 285
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+ M DL+D + + R R+T+ HP+DF D L+ ++ N+ +
Sbjct: 286 ----------EDMTYGLGDLMDEIR-KIDVARIRFTTSHPRDFDDRLIEVLAKGGNLVDH 334
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLP Q+G+S +L+ M R Y+RE YL+LV+KI++ IP L++D I GF ET+E+ +T
Sbjct: 335 IHLPVQSGSSDILKIMARKYSREHYLELVRKIKEAIPTASLTTDIIVGFPNETDEQFEET 394
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
++L + V +D AY F YS RE T A + D+VP EVK+ RL L E + +
Sbjct: 395 MSLYREVEFDSAYTFIYSPREGTPAAK-MQDNVPMEVKKERLQRLNALVNEISAKKLKEY 453
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K P+ L G +++ V F
Sbjct: 454 EGKVVEVLVEGESKNNPEV-LAGYTEKSKLVNF 485
>gi|416164449|ref|ZP_11607214.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
N1568]
gi|325127523|gb|EGC50449.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
N1568]
Length = 442
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/438 (38%), Positives = 247/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + P++A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQPDDADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIVKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPA-ANLHDDTPHEEKVRRLEALNEVIEAETAHINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
VGTVQ LVEG +KK PD
Sbjct: 381 VGTVQRCLVEGISKKDPD 398
>gi|225076607|ref|ZP_03719806.1| hypothetical protein NEIFLAOT_01655 [Neisseria flavescens
NRL30031/H210]
gi|224952107|gb|EEG33316.1| hypothetical protein NEIFLAOT_01655 [Neisseria flavescens
NRL30031/H210]
Length = 440
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +LS++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPDLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIAGLAQQGVKEINLLGQNVNAYRG------EMENG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDAIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
VGTVQ LVEG +KK PD
Sbjct: 381 VGTVQRCLVEGISKKDPD 398
>gi|299535293|ref|ZP_07048616.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Lysinibacillus
fusiformis ZC1]
gi|424737164|ref|ZP_18165620.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Lysinibacillus
fusiformis ZB2]
gi|298729275|gb|EFI69827.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Lysinibacillus
fusiformis ZC1]
gi|422948996|gb|EKU43372.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Lysinibacillus
fusiformis ZB2]
Length = 517
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 258/455 (56%), Gaps = 48/455 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+G+ Y TYGCQMN +D E++ I GY+ V E A+V+ +NTCAIR+ AE+KV
Sbjct: 68 GEGKSYHIMTYGCQMNEHDTEVMAGIFMQLGYTPT-EVIEEADVVLLNTCAIRENAENKV 126
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ L + KR K+P ++ V GCM+ E + +KIL + VD+V G
Sbjct: 127 FGELGFLLKYKR-------------KNPEMLIGVCGCMSQEESVVNKILRSYPHVDMVFG 173
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +L+E ++ + + S E + P + S+ A+V++M GC+ C++
Sbjct: 174 THNIHRLPNILKEAYMSKEMVIEVWSKEGDVIENLPKK-RLGSIKAWVNIMYGCDKFCTY 232
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
CIVP+TRG+ERSR E I+ EV EL G KE+ LLGQNVN+Y G ++
Sbjct: 233 CIVPYTRGKERSRRPEEIIAEVRELAAAGYKEIMLLGQNVNAY------------GKDF- 279
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
+ + R DL+D L ++ P R R+T+ HP+DF D L+ ++ R N+
Sbjct: 280 -----------EDIDYRLGDLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKRGNLV 326
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
++IHLP Q+G++ VL+ M R YTRE +L LV +I+ IP+V L++D I G+ ETEE+
Sbjct: 327 EHIHLPVQSGSNDVLKIMARKYTREHFLGLVDRIKAAIPEVTLTTDIIVGYPNETEEQFE 386
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
+TL+L + VG+D A+ + YS RE T A + +D+VPEEVK+ RL L E E + + +
Sbjct: 387 ETLSLYREVGFDAAFTYIYSPREGTPAAK-MIDNVPEEVKKERLQRLNEVVGEYSRKALE 445
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K+ D L G + + V F
Sbjct: 446 RLNGQVVEVLVEGTSKRRDDV-LAGYTRKNRLVNF 479
>gi|49483455|ref|YP_040679.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus MRSA252]
gi|253731911|ref|ZP_04866076.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257425346|ref|ZP_05601771.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257428007|ref|ZP_05604405.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430640|ref|ZP_05607022.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257433400|ref|ZP_05609758.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus E1410]
gi|257436242|ref|ZP_05612289.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus M876]
gi|258423867|ref|ZP_05686752.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9635]
gi|282903847|ref|ZP_06311735.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus C160]
gi|282905610|ref|ZP_06313465.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282908586|ref|ZP_06316416.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282910864|ref|ZP_06318667.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282914069|ref|ZP_06321856.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
aureus M899]
gi|282918991|ref|ZP_06326726.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus C427]
gi|282924114|ref|ZP_06331790.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus C101]
gi|283958035|ref|ZP_06375486.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus A017934/97]
gi|293501101|ref|ZP_06666952.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 58-424]
gi|293510063|ref|ZP_06668771.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus M809]
gi|293526649|ref|ZP_06671334.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
aureus M1015]
gi|295427779|ref|ZP_06820411.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|297591263|ref|ZP_06949901.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus MN8]
gi|384547535|ref|YP_005736788.1| hypothetical protein SAOV_1294 [Staphylococcus aureus subsp. aureus
ED133]
gi|384550049|ref|YP_005739301.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384867822|ref|YP_005748018.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus TCH60]
gi|386830827|ref|YP_006237481.1| hypothetical protein SAEMRSA15_11270 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387780400|ref|YP_005755198.1| radical SAM superfamily protein [Staphylococcus aureus subsp.
aureus LGA251]
gi|415683881|ref|ZP_11449083.1| hypothetical protein CGSSa00_05748 [Staphylococcus aureus subsp.
aureus CGS00]
gi|416839343|ref|ZP_11902737.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus O11]
gi|417797911|ref|ZP_12445097.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21310]
gi|417887012|ref|ZP_12531151.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21195]
gi|417891742|ref|ZP_12535799.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21200]
gi|417896062|ref|ZP_12540029.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21235]
gi|417903382|ref|ZP_12547229.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21269]
gi|418282932|ref|ZP_12895689.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21202]
gi|418314153|ref|ZP_12925632.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21334]
gi|418566690|ref|ZP_13131063.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21264]
gi|418582126|ref|ZP_13146204.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1605]
gi|418597696|ref|ZP_13161218.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21342]
gi|418603172|ref|ZP_13166563.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21345]
gi|418646140|ref|ZP_13208255.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-55]
gi|418655440|ref|ZP_13217300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-105]
gi|418875228|ref|ZP_13429488.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC93]
gi|418889085|ref|ZP_13443221.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1524]
gi|418891925|ref|ZP_13446040.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1176]
gi|418897830|ref|ZP_13451900.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC341D]
gi|418900700|ref|ZP_13454757.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1214]
gi|418909003|ref|ZP_13463006.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG149]
gi|418917087|ref|ZP_13471046.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1267]
gi|418922874|ref|ZP_13476791.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1233]
gi|418982205|ref|ZP_13529913.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1242]
gi|418985874|ref|ZP_13533560.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1500]
gi|418993913|ref|ZP_13541549.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG290]
gi|421150244|ref|ZP_15609900.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|81651243|sp|Q6GHE3.1|MIAB_STAAR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|49241584|emb|CAG40270.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|253724321|gb|EES93050.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257271803|gb|EEV03941.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257274848|gb|EEV06335.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278768|gb|EEV09387.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257281493|gb|EEV11630.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus E1410]
gi|257284524|gb|EEV14644.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus M876]
gi|257845896|gb|EEV69925.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9635]
gi|282314086|gb|EFB44478.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus C101]
gi|282316801|gb|EFB47175.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus C427]
gi|282322137|gb|EFB52461.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
aureus M899]
gi|282325469|gb|EFB55778.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282327648|gb|EFB57931.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282330902|gb|EFB60416.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282595465|gb|EFC00429.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus C160]
gi|283790184|gb|EFC29001.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus A017934/97]
gi|290920721|gb|EFD97784.1| tRNA-I(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
aureus M1015]
gi|291096106|gb|EFE26367.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 58-424]
gi|291467007|gb|EFF09525.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus M809]
gi|295128137|gb|EFG57771.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|297576149|gb|EFH94865.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus MN8]
gi|298694584|gb|ADI97806.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
gi|302332898|gb|ADL23091.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus JKD6159]
gi|312438327|gb|ADQ77398.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus TCH60]
gi|315194179|gb|EFU24572.1| hypothetical protein CGSSa00_05748 [Staphylococcus aureus subsp.
aureus CGS00]
gi|323441074|gb|EGA98781.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus O11]
gi|334277033|gb|EGL95272.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21310]
gi|341840963|gb|EGS82435.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21235]
gi|341850003|gb|EGS91136.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21269]
gi|341851028|gb|EGS91957.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21200]
gi|341858434|gb|EGS99224.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21195]
gi|344177502|emb|CCC87971.1| radical SAM superfamily protein [Staphylococcus aureus subsp.
aureus LGA251]
gi|365168529|gb|EHM59867.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21202]
gi|365234291|gb|EHM75229.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21334]
gi|371969960|gb|EHO87398.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21264]
gi|374393758|gb|EHQ65062.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21342]
gi|374393901|gb|EHQ65204.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21345]
gi|375021606|gb|EHS15102.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-55]
gi|375037156|gb|EHS30209.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-105]
gi|377703168|gb|EHT27484.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1214]
gi|377704486|gb|EHT28795.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1242]
gi|377705692|gb|EHT29996.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1500]
gi|377710536|gb|EHT34774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1605]
gi|377731257|gb|EHT55314.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1176]
gi|377736197|gb|EHT60227.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1233]
gi|377745963|gb|EHT69938.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG290]
gi|377750261|gb|EHT74199.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1267]
gi|377754041|gb|EHT77951.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG149]
gi|377754595|gb|EHT78504.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1524]
gi|377760865|gb|EHT84741.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC341D]
gi|377770288|gb|EHT94050.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC93]
gi|385196219|emb|CCG15841.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|394329634|gb|EJE55736.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus str. Newbould 305]
Length = 514
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 253/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|114770160|ref|ZP_01447698.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
HTCC2255]
gi|114548997|gb|EAU51880.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
HTCC2255]
Length = 442
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 249/445 (55%), Gaps = 42/445 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y +T+GCQMNV D E + + + GY+EV + PE A++I +NTC IR+ A K++ L
Sbjct: 7 LYIKTFGCQMNVYDSERMATSLGADGYNEV-SSPEEADMILLNTCHIREKAAEKIYSDLG 65
Query: 139 YFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F LK +K+P KI V GC+A+ ++I+ +VD+V GP AY L
Sbjct: 66 RFKSLK-------------AKNPDLKIGVTGCVAQAEGEEIIKRQPLVDIVVGPQAYHRL 112
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P + + ++ G+K ++T E+ + + +K + +AF++V GC+ C+FC+VPFTR
Sbjct: 113 PAMAKSIENGKKVVDTDFPEEDKFEHLPAAPKTKRAPSAFLTVQEGCDKFCAFCVVPFTR 172
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRPV I+ E +L + GV+++TLLGQNVN+Y+ G K + L +
Sbjct: 173 GAEVSRPVLQIINEARDLVERGVRDITLLGQNVNAYH---GAMK----SGDANLPQLIKE 225
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ K++++ R R+T+ HP D EL+ + + Y+HLP Q
Sbjct: 226 LSKIEEL-----------------KRIRFTTSHPNDMTQELIDAHGEMEKLMPYLHLPVQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L+ M R +T ++YL++++ +R PD+ LS DFI GF GET+E+ TL L++
Sbjct: 269 SGSDKILKGMNRKHTAKSYLEVIENLRVARPDIALSGDFIVGFPGETDEDFEQTLELVRE 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y AY F YS R T A N + VPEE+K RL+ L + + + VG V
Sbjct: 329 VKYAQAYSFKYSTRPGTPAAENK-NQVPEEIKSERLSRLQALLSQHQKEFMGTMVGKVLP 387
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
VL+E P + D +LVG+S+ H V
Sbjct: 388 VLLERPGRL--DGQLVGRSEYLHGV 410
>gi|379795659|ref|YP_005325657.1| (Dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356872649|emb|CCE58988.1| (Dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 514
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/448 (37%), Positives = 254/448 (56%), Gaps = 49/448 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEV--INVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+TYGCQMN +D E++ I++ GY INV A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATSDINV---ADVILINTCAIRENAENKVFSEIGN 129
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDL 197
LK+E + ++ G V GCM+ E + +KIL + + VD++ G L
Sbjct: 130 LKHLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHL 177
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P +LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTR
Sbjct: 178 PEILEEAYLSKAMVVEVWSKEGDVIENLP-KVRQGNIKAWVNIMYGCDKFCTYCIVPFTR 236
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G+ERSR E I+ EV EL +EG KE+TLLGQNVNSY
Sbjct: 237 GKERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKD--------------------- 275
Query: 318 MCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
++ M DLL+ +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP
Sbjct: 276 ---LQDMQYDLGDLLEAISKIAIP--RVRFTTSHPWDFTDHMIDVIAEGGNIVPHIHLPV 330
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+GN+AVL+ M R YTRE+YLDLV++I++ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 331 QSGNNAVLKIMGRKYTRESYLDLVKRIKERIPNVALTTDIIVGYPNESEEQFEETLTLYD 390
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V ++ AY + YS R+ T A + D+VP +VK+ RL L + + G
Sbjct: 391 EVKFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKMVGHYSQMAMSKYEGQTV 449
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK + L G +D+ V F
Sbjct: 450 TVLCEGSSKKDEEV-LAGYTDKNKLVNF 476
>gi|358052768|ref|ZP_09146591.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
simiae CCM 7213]
gi|357257741|gb|EHJ07975.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
simiae CCM 7213]
Length = 514
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 253/446 (56%), Gaps = 45/446 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVLAGILEALGYKATSDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVIEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR + I+ EV EL +EG +E+TLLGQNVNSY
Sbjct: 239 ERSRRPQDIIDEVRELAREGYQEITLLGQNVNSYGKD----------------------- 275
Query: 320 KVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
++ M DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q+
Sbjct: 276 -LQDMSYGLGDLLQDISKIAIP--RVRFTTSHPWDFTDHMIDVIAEGGNIVPHIHLPVQS 332
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
GN+ VL+ M R YTRE+YLDLV +I+ IP+V L++D I G+ E+EE+ +TLTL V
Sbjct: 333 GNNKVLKIMGRKYTRESYLDLVSRIKAKIPNVALTTDIIVGYPNESEEQFEETLTLYDEV 392
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
++ AY + YS R+ T A + D+VP +VK+ RL L + E + + G + V
Sbjct: 393 AFEHAYTYLYSQRDGTPAAK-MTDNVPLDVKKERLQRLNKKVGEYSQRAMSQYEGQIVTV 451
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
L EG +KK +T L G +D+ V F
Sbjct: 452 LCEGSSKK-DETVLAGYTDKNKLVNF 476
>gi|57651862|ref|YP_186168.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus COL]
gi|87160782|ref|YP_493882.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88195002|ref|YP_499802.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|151221413|ref|YP_001332235.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus str. Newman]
gi|161509458|ref|YP_001575117.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|221142526|ref|ZP_03567019.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|258452591|ref|ZP_05700597.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A5948]
gi|262048179|ref|ZP_06021066.1| hypothetical protein SAD30_1955 [Staphylococcus aureus D30]
gi|262051352|ref|ZP_06023575.1| hypothetical protein SA930_2074 [Staphylococcus aureus 930918-3]
gi|282920536|ref|ZP_06328257.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9765]
gi|284024285|ref|ZP_06378683.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus 132]
gi|294848288|ref|ZP_06789035.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9754]
gi|304381143|ref|ZP_07363796.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|379014483|ref|YP_005290719.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus VC40]
gi|384861885|ref|YP_005744605.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384869827|ref|YP_005752541.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Staphylococcus aureus subsp. aureus T0131]
gi|415686484|ref|ZP_11450573.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
CGS01]
gi|417649432|ref|ZP_12299231.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21189]
gi|418281421|ref|ZP_12894232.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21178]
gi|418284601|ref|ZP_12897318.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21209]
gi|418317632|ref|ZP_12929048.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21232]
gi|418570835|ref|ZP_13135096.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21283]
gi|418579126|ref|ZP_13143221.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1114]
gi|418642893|ref|ZP_13205079.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-24]
gi|418648229|ref|ZP_13210274.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-88]
gi|418649345|ref|ZP_13211373.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-91]
gi|418660127|ref|ZP_13221769.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-111]
gi|418873503|ref|ZP_13427798.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-125]
gi|418903505|ref|ZP_13457546.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1770]
gi|418906228|ref|ZP_13460255.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC345D]
gi|418911899|ref|ZP_13465882.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG547]
gi|418925529|ref|ZP_13479431.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG2018]
gi|418928552|ref|ZP_13482438.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1612]
gi|418947382|ref|ZP_13499756.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-157]
gi|418955535|ref|ZP_13507475.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-189]
gi|422742757|ref|ZP_16796757.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus MRSA177]
gi|424785125|ref|ZP_18211928.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus aureus CN79]
gi|440706013|ref|ZP_20886762.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21282]
gi|440734738|ref|ZP_20914350.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|81694614|sp|Q5HGD9.1|MIAB_STAAC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|123407056|sp|Q2FZ02.1|MIAB_STAA8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|123486136|sp|Q2FHE6.1|MIAB_STAA3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229891005|sp|A6QGJ1.1|MIAB_STAAE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229891006|sp|A8Z1W3.1|MIAB_STAAT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|57286048|gb|AAW38142.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
aureus COL]
gi|87126756|gb|ABD21270.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|87202560|gb|ABD30370.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374213|dbj|BAF67473.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368267|gb|ABX29238.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257859809|gb|EEV82651.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A5948]
gi|259160727|gb|EEW45748.1| hypothetical protein SA930_2074 [Staphylococcus aureus 930918-3]
gi|259163745|gb|EEW48300.1| hypothetical protein SAD30_1955 [Staphylococcus aureus D30]
gi|282594198|gb|EFB99185.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9765]
gi|294825088|gb|EFG41510.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9754]
gi|302751114|gb|ADL65291.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|304340126|gb|EFM06067.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|315198534|gb|EFU28863.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320143843|gb|EFW35615.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus MRSA177]
gi|329313962|gb|AEB88375.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus T0131]
gi|329727801|gb|EGG64252.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21189]
gi|365165243|gb|EHM57071.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21178]
gi|365173149|gb|EHM63736.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21209]
gi|365244900|gb|EHM85552.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21232]
gi|371983015|gb|EHP00163.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21283]
gi|374363180|gb|AEZ37285.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus VC40]
gi|375016006|gb|EHS09650.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-24]
gi|375026646|gb|EHS20025.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-88]
gi|375029718|gb|EHS23043.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-91]
gi|375033017|gb|EHS26228.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-111]
gi|375366040|gb|EHS70052.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-125]
gi|375371018|gb|EHS74810.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-189]
gi|375376125|gb|EHS79674.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-157]
gi|377697153|gb|EHT21508.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1114]
gi|377725277|gb|EHT49392.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG547]
gi|377738464|gb|EHT62473.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1612]
gi|377742520|gb|EHT66505.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1770]
gi|377744598|gb|EHT68575.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG2018]
gi|377765528|gb|EHT89378.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC345D]
gi|421956535|gb|EKU08864.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus aureus CN79]
gi|436431766|gb|ELP29119.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|436507544|gb|ELP43224.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21282]
Length = 514
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 252/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLNVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|357404242|ref|YP_004916166.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylomicrobium
alcaliphilum 20Z]
gi|351716907|emb|CCE22572.1| putative tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylomicrobium
alcaliphilum 20Z]
Length = 451
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 252/447 (56%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T GCQMN D + + ++K + E+ + P+ A+V+ +NTC++R+ A+ KV+ L
Sbjct: 4 KLYIQTNGCQMNEYDSDKMRDVLKASHGLELTDKPDEADVLLLNTCSVREKAQEKVFSAL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
W +E K +V G V GC+A + + I VD+V GP L
Sbjct: 64 G-VWRPFKELKPDVIIG-----------VGGCVASQEGEAIQKRAPFVDIVFGPQTLHRL 111
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P+LL+E K + + E D P ++ AFVSVM GC+ C+FC+VP+TR
Sbjct: 112 PQLLDEARNKHKRVIDISFPEIEKFDALPEPRAEGP-KAFVSVMEGCSKYCTFCVVPYTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRP++ ++ E+ L K+GV+EV LLGQNVN+Y A+ +++
Sbjct: 171 GEEISRPLDDVITEITILAKQGVREVNLLGQNVNAYRGLM---------ADGDIAD---- 217
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
FA LL ++ R R+T+ +P +F D L+ + P + ++HLP Q
Sbjct: 218 ----------FALLLHHVAAIDGIDRIRFTTSNPVEFSDSLIEAYAEIPQLVDHLHLPVQ 267
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ A+L++M+RG+ R Y ++++K+R++ P++ LSSDFI GF GET+ + DT+ L++
Sbjct: 268 SGSDAILKKMKRGHARAEYFEIIRKLREVRPNISLSSDFIIGFPGETDRDFDDTMDLIET 327
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+G+D++Y F YS R T A + DDVP EVK++RL L E Q S V TVQ
Sbjct: 328 IGFDLSYSFIYSQRPGTPAA-DLPDDVPVEVKKQRLQRLQNRINEMAAQISASMVDTVQT 386
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK P ++ G+++ V F
Sbjct: 387 VLVEGPSKKNP-LQMQGRTENNRVVNF 412
>gi|322435958|ref|YP_004218170.1| MiaB family RNA modification protein [Granulicella tundricola
MP5ACTX9]
gi|321163685|gb|ADW69390.1| RNA modification enzyme, MiaB family [Granulicella tundricola
MP5ACTX9]
Length = 440
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 244/446 (54%), Gaps = 44/446 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
Y ET+GCQMN +D E V+ ++ GY++V + E A +I NTC+IRD AE KV+ RLN
Sbjct: 5 FYIETFGCQMNAHDSEKVVGTLEQQGYAQVQDEAE-AGLILYNTCSIRDKAEQKVFHRLN 63
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
E+KK G+ + V+GC+A++ +KI D V +V G +YR+LP
Sbjct: 64 -------EYKKMQGEGK-------RFAVIGCVAQQEGEKIFDRAPYVSIVAGSASYRNLP 109
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LE ++ G + I L + T +P N +++++ GC+ C++C+VP+TRG
Sbjct: 110 GMLERLERGDQRITGLDDKKTTETFETPFVARTNQHRGYITIIEGCDKFCAYCVVPYTRG 169
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
ERSR S+++E + G E+ LLGQNVNSY D SG +
Sbjct: 170 NERSRSAASVMEEARRMADSGYTEIQLLGQNVNSYRDPSGAKS----------------- 212
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
FA+LL + R R+T+ HP+DF +++ ++ P +C ++HLP Q+
Sbjct: 213 ---------FAELLHAVGTIPGIRRVRFTTSHPRDFTRDIVEVIDATPTLCDHVHLPVQS 263
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ +L M R YTRE YL+ + ++ D+ ++SD I GF GET+E+ DT TL+ AV
Sbjct: 264 GSTRILAAMAREYTREWYLERIAWMKAAKRDISMTSDIIVGFPGETDEDLEDTATLLDAV 323
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
GYD + F YS R T + + D + +EVK RL L++ RE Y +G V V
Sbjct: 324 GYDAIFAFKYSPRPNTPS-VSMADSLSDEVKAARLQILLDRQREIQRINYQRHIGQVVEV 382
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
+VEG N++ ++VG++ + + F
Sbjct: 383 MVEGHNRQ--RNQVVGRTSQNKTLNF 406
>gi|15924282|ref|NP_371816.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926875|ref|NP_374408.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus N315]
gi|21282904|ref|NP_645992.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus MW2]
gi|49486131|ref|YP_043352.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus MSSA476]
gi|148267782|ref|YP_001246725.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus JH9]
gi|150393841|ref|YP_001316516.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus JH1]
gi|156979613|ref|YP_001441872.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus Mu3]
gi|253733470|ref|ZP_04867635.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006079|ref|ZP_05144680.2| hypothetical protein SauraM_06400 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257795652|ref|ZP_05644631.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9781]
gi|258421638|ref|ZP_05684562.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9719]
gi|258434794|ref|ZP_05688868.1| tRNA 2-methylthioadenosine synthase [Staphylococcus aureus A9299]
gi|258444630|ref|ZP_05692959.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A8115]
gi|258447537|ref|ZP_05695681.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A6300]
gi|258449379|ref|ZP_05697482.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A6224]
gi|258454758|ref|ZP_05702722.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A5937]
gi|269202909|ref|YP_003282178.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
aureus ED98]
gi|282892780|ref|ZP_06301015.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A8117]
gi|282927634|ref|ZP_06335250.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A10102]
gi|295406229|ref|ZP_06816036.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A8819]
gi|296274850|ref|ZP_06857357.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus subsp. aureus MR1]
gi|297244457|ref|ZP_06928340.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A8796]
gi|300912143|ref|ZP_07129586.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus TCH70]
gi|384864519|ref|YP_005749878.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|385781520|ref|YP_005757691.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 11819-97]
gi|387150435|ref|YP_005741999.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus aureus 04-02981]
gi|415691142|ref|ZP_11453381.1| hypothetical protein CGSSa03_06074 [Staphylococcus aureus subsp.
aureus CGS03]
gi|417651210|ref|ZP_12300973.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21172]
gi|417802625|ref|ZP_12449682.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21318]
gi|417892236|ref|ZP_12536290.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21201]
gi|417898390|ref|ZP_12542310.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21259]
gi|418424433|ref|ZP_12997555.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus VRS1]
gi|418430268|ref|ZP_13003184.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus VRS3a]
gi|418433234|ref|ZP_13006011.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus VRS4]
gi|418436905|ref|ZP_13008707.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS5]
gi|418439777|ref|ZP_13011484.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS6]
gi|418442829|ref|ZP_13014431.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus VRS7]
gi|418454712|ref|ZP_13025974.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS11a]
gi|418457588|ref|ZP_13028791.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS11b]
gi|418568964|ref|ZP_13133304.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21272]
gi|418572271|ref|ZP_13136483.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21333]
gi|418599718|ref|ZP_13163198.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21343]
gi|418638108|ref|ZP_13200411.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-3]
gi|418654665|ref|ZP_13216561.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-99]
gi|418662198|ref|ZP_13223751.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-122]
gi|418878141|ref|ZP_13432376.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1165]
gi|418880971|ref|ZP_13435190.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1213]
gi|418883899|ref|ZP_13438094.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1769]
gi|418886554|ref|ZP_13440702.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1150]
gi|418894992|ref|ZP_13449087.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1057]
gi|418914390|ref|ZP_13468362.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC340D]
gi|418920371|ref|ZP_13474304.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC348]
gi|418931363|ref|ZP_13485204.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1750]
gi|418934195|ref|ZP_13488018.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC128]
gi|418988114|ref|ZP_13535787.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1835]
gi|418991156|ref|ZP_13538817.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1096]
gi|419784943|ref|ZP_14310701.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-M]
gi|424768022|ref|ZP_18195315.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CM05]
gi|443636863|ref|ZP_21120956.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21236]
gi|448741809|ref|ZP_21723766.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus KT/314250]
gi|81649395|sp|Q6G9S1.1|MIAB_STAAS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|81704466|sp|Q7A110.1|MIAB_STAAW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|81705771|sp|Q7A5W3.1|MIAB_STAAN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|81781679|sp|Q99UI1.1|MIAB_STAAM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229891002|sp|A7X1T3.1|MIAB_STAA1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229891003|sp|A6U1B1.1|MIAB_STAA2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229891004|sp|A5ISH6.1|MIAB_STAA9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|13701092|dbj|BAB42387.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247062|dbj|BAB57454.1| similar to tRNA 2-methylthioadenosine synthase [Staphylococcus
aureus subsp. aureus Mu50]
gi|21204343|dbj|BAB95040.1| conserved hypotehtical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244574|emb|CAG43003.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|147740851|gb|ABQ49149.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus JH9]
gi|149946293|gb|ABR52229.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus JH1]
gi|156721748|dbj|BAF78165.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|253728524|gb|EES97253.1| 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257789624|gb|EEV27964.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9781]
gi|257842324|gb|EEV66749.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9719]
gi|257849155|gb|EEV73137.1| tRNA 2-methylthioadenosine synthase [Staphylococcus aureus A9299]
gi|257850123|gb|EEV74076.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A8115]
gi|257853728|gb|EEV76687.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A6300]
gi|257857367|gb|EEV80265.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A6224]
gi|257863141|gb|EEV85905.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A5937]
gi|262075199|gb|ACY11172.1| tRNA-i(6)A37 modification enzyme MiaB [Staphylococcus aureus subsp.
aureus ED98]
gi|282590637|gb|EFB95714.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A10102]
gi|282764777|gb|EFC04902.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A8117]
gi|285816974|gb|ADC37461.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus aureus 04-02981]
gi|294968817|gb|EFG44839.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A8819]
gi|297178487|gb|EFH37733.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A8796]
gi|300886389|gb|EFK81591.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus TCH70]
gi|312829686|emb|CBX34528.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315131086|gb|EFT87070.1| hypothetical protein CGSSa03_06074 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329727394|gb|EGG63850.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21172]
gi|334274261|gb|EGL92583.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21318]
gi|341848423|gb|EGS89586.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21259]
gi|341858203|gb|EGS99004.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21201]
gi|364522509|gb|AEW65259.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 11819-97]
gi|371978149|gb|EHO95399.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21272]
gi|371984755|gb|EHP01864.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21333]
gi|374396376|gb|EHQ67617.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21343]
gi|375014490|gb|EHS08171.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-99]
gi|375023332|gb|EHS16795.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-3]
gi|375036889|gb|EHS29950.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-122]
gi|377694263|gb|EHT18628.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1165]
gi|377694798|gb|EHT19162.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1057]
gi|377714645|gb|EHT38844.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1750]
gi|377714986|gb|EHT39184.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1769]
gi|377719902|gb|EHT44072.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1835]
gi|377723278|gb|EHT47403.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1096]
gi|377725507|gb|EHT49620.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1150]
gi|377731864|gb|EHT55917.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIG1213]
gi|377757892|gb|EHT81780.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC340D]
gi|377765730|gb|EHT89579.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC348]
gi|377770938|gb|EHT94697.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CIGC128]
gi|383363544|gb|EID40876.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus IS-M]
gi|387718663|gb|EIK06621.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus VRS3a]
gi|387720340|gb|EIK08252.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus VRS1]
gi|387725674|gb|EIK13278.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus VRS4]
gi|387728009|gb|EIK15509.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS5]
gi|387730739|gb|EIK18100.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS6]
gi|387737494|gb|EIK24560.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus VRS7]
gi|387745827|gb|EIK32577.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS11a]
gi|387747320|gb|EIK34029.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS11b]
gi|402348659|gb|EJU83638.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus CM05]
gi|408423478|emb|CCJ10889.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Staphylococcus aureus subsp. aureus ST228]
gi|408425468|emb|CCJ12855.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Staphylococcus aureus subsp. aureus ST228]
gi|408427456|emb|CCJ14819.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Staphylococcus aureus subsp. aureus ST228]
gi|408429443|emb|CCJ26608.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Staphylococcus aureus subsp. aureus ST228]
gi|408431431|emb|CCJ18746.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Staphylococcus aureus subsp. aureus ST228]
gi|408433425|emb|CCJ20710.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Staphylococcus aureus subsp. aureus ST228]
gi|408435416|emb|CCJ22676.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Staphylococcus aureus subsp. aureus ST228]
gi|408437401|emb|CCJ24644.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Staphylococcus aureus subsp. aureus ST228]
gi|443406840|gb|ELS65410.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21236]
gi|445547447|gb|ELY15716.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus KT/314250]
Length = 514
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 252/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLNVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|148265155|ref|YP_001231861.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter
uraniireducens Rf4]
gi|229890547|sp|A5G670.1|MIAB_GEOUR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|146398655|gb|ABQ27288.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacter uraniireducens
Rf4]
Length = 440
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 245/445 (55%), Gaps = 44/445 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y ET+GCQMNV+D E + +++K GY + + A+++ +NTC++R AE KV+ L
Sbjct: 7 LYLETFGCQMNVSDSEKIAALLKGIGYFPTQDSSQ-ADLVILNTCSVRAKAEEKVYNHLV 65
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ LKR K P I+ V GC+A++ +++L +D+V G L
Sbjct: 66 QYKGLKR-------------KKPGIILGVGGCVAQQEGERLLANVPHLDIVFGTHNLHLL 112
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ + G++ ET D+ PV + V+ FV+VM+GC N CS+CIVP+ R
Sbjct: 113 PELVRAAEKGERLAEVGFIDNETRLDLFPVDERTDGVSRFVTVMQGCENFCSYCIVPYVR 172
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRE SR I+ EV + GVKEVTLLGQNVNSY S E
Sbjct: 173 GREISRRSADILGEVRGMAGNGVKEVTLLGQNVNSYGLKSSGE----------------- 215
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ F LL +SL R R+T+ HPKDF L+ + P +C++IHLPAQ
Sbjct: 216 --------MSFIALLREVSLIPGIERIRFTTSHPKDFSQPLIDCFAEIPKLCRHIHLPAQ 267
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G++AVL M RGYTRE YL + +++ P + ++ D I GF GETEE+ TL+LM+
Sbjct: 268 SGSNAVLAAMNRGYTREEYLGSIARLKAACPSIQITGDIIVGFPGETEEDFQATLSLMEE 327
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y + F YS R T A Y D+V ++ KQ RL+ L++ R T + S VGTVQ
Sbjct: 328 VRYTDVFSFIYSKRPETKAA-GYADEVGQDEKQGRLSRLLDLQRRITLETNKSFVGTVQQ 386
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
VL+EG +++ + G++ G+RV
Sbjct: 387 VLIEGESRRG--GQFYGRTS-GNRV 408
>gi|302874905|ref|YP_003843538.1| MiaB family RNA modification protein [Clostridium cellulovorans
743B]
gi|307690475|ref|ZP_07632921.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
cellulovorans 743B]
gi|302577762|gb|ADL51774.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
743B]
Length = 452
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 249/447 (55%), Gaps = 49/447 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMN D E + ++ GY E E A +I NTCA+R+ AE KV+ +
Sbjct: 22 TFGCQMNEEDSEKLSGVLMEMGY-EKTEKREEASIIIFNTCAVRENAELKVFGNIG---- 76
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
A + + K+P I+ + GCM ++ + ++++ VD++ G P
Sbjct: 77 ---------ALKKMKEKNPSLIIGICGCMMQQKGMAEEVIKKYPFVDIIFGTHNSHMFPE 127
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPV-RISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
L V K + +L E + P+ R+S S+ AFV++M GCNN C++CIVP+ RG
Sbjct: 128 YLNSVKQHGKSVVEILDKEVGIVEGLPIDRLS--SIKAFVTIMYGCNNFCTYCIVPYVRG 185
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERSR E I+ E+ EL K G KEVTLLGQNVNSY G+E+E++
Sbjct: 186 RERSRKPEDIINEIKELVKVGYKEVTLLGQNVNSYG--KGLEEEID-------------- 229
Query: 319 CKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
FA LL RL E + R ++ S HPKD D+++ + + VC+ IHLP Q
Sbjct: 230 ---------FAKLL-RLVNEIEGLERIKFMSSHPKDLTDDVIKAIAECDKVCEQIHLPVQ 279
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
G++++L+RM R YTRE YLDLV++I++ IP+V L++D I GF GETEE+ + ++L+K
Sbjct: 280 AGSTSLLKRMNRHYTREQYLDLVKRIKENIPNVALTTDLIIGFPGETEEDVEEVISLVKE 339
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V YD A+ F YS R+ T A D +PE++K RR L++ + + G V
Sbjct: 340 VRYDSAFTFLYSPRKGTPAAE-LPDQIPEDIKHRRFNALVDELNKIGAEISKEYDGKVVE 398
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+K D +L+G++ G V F
Sbjct: 399 VLVEGPSKN-DDNKLMGRTRTGKLVNF 424
>gi|297208061|ref|ZP_06924492.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|296887304|gb|EFH26206.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus ATCC 51811]
Length = 514
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 252/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLNVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|187477340|ref|YP_785364.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
avium 197N]
gi|123765978|sp|Q2KWE0.1|MIAB_BORA1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|115421926|emb|CAJ48446.1| putative nucleic acid binding protein [Bordetella avium 197N]
Length = 475
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 246/450 (54%), Gaps = 41/450 (9%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G+IY T+GCQMN D + ++ +++ E+ + PE A+VI NTC++R+ A+ KV+
Sbjct: 27 GKIYIRTFGCQMNEYDSDKMVDVLREDQGLEMTDNPEEADVILFNTCSVREKAQEKVFSD 86
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK+ N+ G V GC+A + I+ VDVV GP
Sbjct: 87 LGRVQHLKK-LNPNLVIG-----------VGGCVASQEGAAIVKRAPYVDVVFGPQTLHR 134
Query: 197 LPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L+ D G ++ E + ++ P R+ TAFVS+M GC+ CSFC+VP+
Sbjct: 135 LPELIRRRRDEGVSQVDISFPEIEKFDNMPPSRV--EGATAFVSIMEGCSKYCSFCVVPY 192
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP E ++ EV +L +GV+EVTLLGQNVN+Y R+ EG
Sbjct: 193 TRGEEVSRPFEDVLTEVADLADQGVREVTLLGQNVNAYR--------------GRI-EGS 237
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + FA LL+ + E P + R RYT+ HPK+ ++ P + ++HL
Sbjct: 238 DEIAD-------FAMLLEYVH-EIPGIERIRYTTSHPKEMTQRMVEAYARLPKLVSFLHL 289
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ VL M+RGYT + +V+K+R P++ LSSDFI GF GETEE+ T+ L
Sbjct: 290 PVQAGSDRVLAAMKRGYTALEFKSVVRKLRAARPNLTLSSDFIVGFPGETEEDFQKTMKL 349
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D ++ F YS R T A + DD P++VK +RL +L E S VGT
Sbjct: 350 IADVGFDTSFSFVYSRRPGTPAA-DLQDDTPQDVKLKRLQQLQALINEQAAAIAQSMVGT 408
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LVEGP+++ P+ EL+G+++ V F
Sbjct: 409 RQRLLVEGPSRRDPN-ELMGRTENNRIVNF 437
>gi|337749959|ref|YP_004644121.1| protein MiaB [Paenibacillus mucilaginosus KNP414]
gi|336301148|gb|AEI44251.1| MiaB [Paenibacillus mucilaginosus KNP414]
Length = 459
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 254/446 (56%), Gaps = 46/446 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E + +++ GY + A++I +NTCA+R+ AE KV+ L +
Sbjct: 23 QTYGCQMNEHDTETIKGLLEGLGYRATED-RRQADIILLNTCAVRENAEDKVFGELGHLK 81
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK E K ++ G V GCM+ E ++IL VD++ G LP
Sbjct: 82 HLKTE-KPSLLLG-----------VCGCMSQEEATVNRILKKHPFVDLIFGTHNIHRLPF 129
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L++E + ++ + + S E + P + + + A+V++M GC+ C++CIVP+TRG+
Sbjct: 130 LVKEAMFSKEMVIEVWSKEGDIIENLPKK--REGLKAWVNIMYGCDKFCTYCIVPYTRGK 187
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E ++ EV EL ++G KEV LLGQNVN+Y G ++
Sbjct: 188 ERSRRPEDVIAEVRELARQGYKEVMLLGQNVNAY------------GKDF---------- 225
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
+ + RF DL+D + ++ P R R+T+ HP+DF D L+ ++ + N+ ++IHLP Q+
Sbjct: 226 --EDLEYRFGDLMDDIRKIDIP--RVRFTTSHPRDFDDHLIEVLAQKGNLMEHIHLPVQS 281
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ VL+RM R YTRE YL+LV KI+ IPDV L+SDFI GF GETEE+ +T+ L++ V
Sbjct: 282 GSNEVLKRMSRKYTREQYLELVAKIKAAIPDVVLTSDFIVGFPGETEEQFEETVALVREV 341
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
GYD A+ F YS RE T A D VP++VK RRL L + E+ + + +G V
Sbjct: 342 GYDFAFTFIYSPREGTPA-AGMEDTVPQDVKSRRLRRLNDVLSENMKRSNEKLLGQTVEV 400
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +K D L G++ V F
Sbjct: 401 FVEGVSKNN-DRVLAGRTRTNKLVHF 425
>gi|282916552|ref|ZP_06324310.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus D139]
gi|283770356|ref|ZP_06343248.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
gi|282319039|gb|EFB49391.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus D139]
gi|283460503|gb|EFC07593.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
Length = 514
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 253/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATSDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|418448835|ref|ZP_13020226.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS9]
gi|418451656|ref|ZP_13022990.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS10]
gi|387737744|gb|EIK24804.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS9]
gi|387744537|gb|EIK31301.1| miaB- tRNA-I(6)A37 modification enzyme MiaB bifunctional enzyme
[Staphylococcus aureus subsp. aureus VRS10]
Length = 514
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 252/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLNVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|386346761|ref|YP_006045010.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Spirochaeta thermophila DSM 6578]
gi|339411728|gb|AEJ61293.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Spirochaeta thermophila DSM 6578]
Length = 448
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 252/447 (56%), Gaps = 43/447 (9%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGCQMN + E ++ ++ AG+ + PE A+V+ +NTC +R AE ++ RL Y
Sbjct: 5 WVETYGCQMNKAESEALIRDLEEAGWGRA-SAPEEADVVVLNTCTVRQTAEERIAGRLGY 63
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
+ +LK KH I+VL GCMAER+K+++L+A VDVV G
Sbjct: 64 YRYLK--------------KHGRFILVLMGCMAERMKEEVLEAFPHVDVVVGTFQKNSFV 109
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
RLL E + LL EE + S AFV +M GCNN CS+CIVP+ RG
Sbjct: 110 RLLRERAEDLTLLQQLLLTEEDEYSFEKLHHSGLGFKAFVPIMHGCNNFCSYCIVPYVRG 169
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE SR I +E++ L ++GV+E+TLLGQNVNSY T W E
Sbjct: 170 REISRRPSEIFEEIEALLEKGVREITLLGQNVNSYRFT------------WEGKE----- 212
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRF-RYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+RFA LL + FPE+ + R+ + HPKD +EL+ +M ++CK++HLP Q
Sbjct: 213 -------MRFAGLLREIVHRFPELPWLRFLTSHPKDLSEELIEVMSASSSICKHLHLPVQ 265
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
G++ +L M R YTRE YL+LV++IR +P + L++D + GF GETEE+ TL LM+
Sbjct: 266 HGSNRILGAMNRRYTREHYLNLVERIRTAMPGIALTTDILVGFPGETEEDLELTLDLMRR 325
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V + AY + Y+ R+ T A+ + D +P EVK+ RL +I RE + + ++G +
Sbjct: 326 VRFADAYTYYYNPRKGTRAY-EWGDPIPLEVKKERLGRVIRLQRELSLEWKQRKIGRMVD 384
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE ++K D E++ ++++ V F
Sbjct: 385 VLVEEVSRKRED-EVLARTEQDEMVVF 410
>gi|418427428|ref|ZP_13000440.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus VRS2]
gi|387719015|gb|EIK06971.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus aureus subsp. aureus VRS2]
Length = 514
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 252/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY-NDTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMVRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLNVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|297617255|ref|YP_003702414.1| MiaB family RNA modification protein [Syntrophothermus lipocalidus
DSM 12680]
gi|297145092|gb|ADI01849.1| RNA modification enzyme, MiaB family [Syntrophothermus lipocalidus
DSM 12680]
Length = 447
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/458 (39%), Positives = 253/458 (55%), Gaps = 71/458 (15%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN D E + +++ +GY E + PE A +I NTC++R AE+KV+ +L
Sbjct: 15 TYGCQMNERDTETIAGLLEKSGYVEAAS-PEEANLIIFNTCSVRTSAENKVYGKLGEIKR 73
Query: 143 LKREWKKNVATGRSQSKHPPKIVVL--GCMA--ERLKDKILDADKMVDVVCGPDAYRDLP 198
LK K P ++V GCMA E ++ K L +VD++ G +LP
Sbjct: 74 LK--------------KARPDLLVGFGGCMAQMEEVRKK-LGEGGVVDIIFGTHNLHELP 118
Query: 199 RLLEEVDYGQKGINTLLSLEETYADIS---PVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
RL+E+ + G + ++ + DI P R V+AFV++M GCNN CS+CIVPF
Sbjct: 119 RLVEKAEAGVE--RPVIDVWPEAGDIVEGLPAR-RTGGVSAFVNIMFGCNNFCSYCIVPF 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR I+ EV +L ++GVKEVTLLGQNVNSY G+E E +
Sbjct: 176 TRGRERSRKPSDIIDEVKDLVQQGVKEVTLLGQNVNSYG--KGLEPETD----------- 222
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FA LL+ L E P + R R+T+ HP+D + LL + VC++IH
Sbjct: 223 ------------FASLLE-LVNEIPGLERIRFTTSHPRDVSERLLSTIASCRKVCEHIHA 269
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G++ +L+ M RGYTRE YLDLV K+R+I+P V +++D I GF GE++ + DT+ +
Sbjct: 270 PLQAGSNRILKAMNRGYTREYYLDLVHKMREIVPGVAVTTDLIVGFPGESDRDFEDTIDM 329
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL--------IEAFRESTGQ 486
+K + +D A+ F YS R T A R D VP EVK+ RL +L +EA R G+
Sbjct: 330 VKRIRFDAAFTFMYSPRSGTKAAR-LSDQVPLEVKKERLLQLNEIQYNIALEANRRFEGK 388
Query: 487 CYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEGP+K P +L G++ V F
Sbjct: 389 DVE--------VLVEGPSKTNP-RKLTGRTRTNRIVVF 417
>gi|416844728|ref|ZP_11905414.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus O46]
gi|323443943|gb|EGB01554.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
aureus O46]
Length = 514
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 252/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I+ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILDALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|126652507|ref|ZP_01724672.1| YmcB [Bacillus sp. B14905]
gi|126590635|gb|EAZ84751.1| YmcB [Bacillus sp. B14905]
Length = 514
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 257/450 (57%), Gaps = 47/450 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
Y TYGCQMN +D E++ I GY+ + E A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 70 FYIRTYGCQMNEHDTEVMAGIFMQLGYTPT-EIIEEADVVLLNTCAIRENAENKVFGELG 128
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ KR K+P ++ V GCM+ E + +KIL + VD+V G
Sbjct: 129 FLLKYKR-------------KNPEMLIGVCGCMSQEESVVNKILRSYPHVDMVFGTHNIH 175
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L+E ++ + + S E + P + S+ A+V++M GC+ C++CIVP+
Sbjct: 176 RLPNILKEAYMSKEMVVEVWSKEGDVIENLPKK-RLGSIKAWVNIMYGCDKFCTYCIVPY 234
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I+ EV EL G +E+ LLGQNVN+Y G ++
Sbjct: 235 TRGKERSRRPEEIIAEVRELAAAGYQEIMLLGQNVNAY------------GKDF------ 276
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + R DL+D L ++ P R R+T+ HP+DF D+L+ ++ R N+ ++IHL
Sbjct: 277 ------EDIEYRLGDLMDALRKIDIP--RIRFTTSHPRDFDDQLIEVLAKRGNLVEHIHL 328
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE +L LV+KI+ IP+V L++D I G+ ETEE+ +TL+L
Sbjct: 329 PVQSGSNDILKIMARKYTREHFLTLVEKIKAAIPEVTLTTDIIVGYPNETEEQFEETLSL 388
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG++ A+ + YS RE T A + VD+VPEEVK+ RL L E E + + + G
Sbjct: 389 YREVGFEAAFTYIYSPREGTPAAK-MVDNVPEEVKKERLQRLNEVVGEYSRKALERLNGE 447
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K+ D L G + + V F
Sbjct: 448 VVEVLVEGTSKRRDDV-LAGYTRKNRLVNF 476
>gi|258416055|ref|ZP_05682323.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9763]
gi|257839203|gb|EEV63679.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
A9763]
Length = 514
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 252/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVCEGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLNVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|374296083|ref|YP_005046274.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Clostridium clariflavum DSM 19732]
gi|359825577|gb|AEV68350.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Clostridium clariflavum DSM 19732]
Length = 475
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 251/448 (56%), Gaps = 48/448 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
Y ET+GCQMN +D E + ++ GY+E N+ EN+++I NTC +R+ AE KV+ L
Sbjct: 42 YIETFGCQMNEHDSEKLAGMLNEMGYAEGSNM-ENSDLIIYNTCCVRENAELKVYGHLGP 100
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRD 196
LK++ +P I+ V GCM ++ + + I + VD++ G
Sbjct: 101 MKHLKKD-------------NPDLIIAVCGCMMQQPEVVEHIKKVYRHVDLIFGTHNLYK 147
Query: 197 LPRLL-EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
P LL + Q I + S+ D+ P++ K+ A+V+VM GCNN CS+CIVP+
Sbjct: 148 FPELLYNAISSDQTVIEIMDSIGLIAEDV-PIQ-RKDGFKAWVTVMYGCNNFCSYCIVPY 205
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
RGRERSR IV+EV L ++GVKE+TLLGQNVNSY G +
Sbjct: 206 VRGRERSREFGKIVEEVKMLGQQGVKEITLLGQNVNSYGKDLGGD--------------- 250
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA LL L+ R R+ + HPKD DEL+Y MRD +C+++HLP
Sbjct: 251 ----------ISFARLLTELNKVEGIERIRFMTSHPKDLSDELIYAMRDLDKLCEHLHLP 300
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G++ +L+ M R YT+E YL LV+KI+Q IPD+ L++D I GF GETEE+ DTL ++
Sbjct: 301 FQAGSTKILKEMNRKYTKEDYLRLVEKIKQNIPDISLTTDIIVGFPGETEEDFQDTLVVV 360
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +D AY F YS R T A ++ ++ +PEEVK+ R L+E + + DS +
Sbjct: 361 EKVRFDQAYTFLYSKRTGTPAAKS-LNQIPEEVKKERFQRLLELQNRISKEINDSYLNKK 419
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVA 523
VLVEG + K + G++ RG++V
Sbjct: 420 VEVLVEGKS-KTNEKNYTGRT-RGNKVV 445
>gi|194097636|ref|YP_002000671.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
gonorrhoeae NCCP11945]
gi|254492946|ref|ZP_05106117.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268594020|ref|ZP_06128187.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268596073|ref|ZP_06130240.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268600543|ref|ZP_06134710.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268681325|ref|ZP_06148187.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268683496|ref|ZP_06150358.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268685802|ref|ZP_06152664.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044655|ref|ZP_06570364.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|293397764|ref|ZP_06641970.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria gonorrhoeae
F62]
gi|385334916|ref|YP_005888863.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
gonorrhoeae TCDC-NG08107]
gi|229890573|sp|B4RNW8.1|MIAB_NEIG2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|193932926|gb|ACF28750.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
[Neisseria gonorrhoeae NCCP11945]
gi|226511986|gb|EEH61331.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268547409|gb|EEZ42827.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268549861|gb|EEZ44880.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268584674|gb|EEZ49350.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268621609|gb|EEZ54009.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268623780|gb|EEZ56180.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268626086|gb|EEZ58486.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011549|gb|EFE03545.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291611710|gb|EFF40779.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria gonorrhoeae
F62]
gi|317163459|gb|ADV07000.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 442
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/438 (38%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +LS++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|261365367|ref|ZP_05978250.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria mucosa ATCC
25996]
gi|298369521|ref|ZP_06980838.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria sp. oral taxon
014 str. F0314]
gi|340363689|ref|ZP_08686009.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria macacae ATCC
33926]
gi|419798258|ref|ZP_14323675.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria sicca VK64]
gi|288566157|gb|EFC87717.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria mucosa ATCC
25996]
gi|298282078|gb|EFI23566.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria sp. oral taxon
014 str. F0314]
gi|339885087|gb|EGQ74826.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria macacae ATCC
33926]
gi|385695459|gb|EIG26020.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria sicca VK64]
Length = 442
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/439 (38%), Positives = 246/439 (56%), Gaps = 50/439 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM--KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+++ T+GCQMN D E +L+++ +N G +V E A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLAVLAEENGGIEQVTEADE-ADIILFNTCSVREKAQEKVFS 61
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 62 DLGRVRPLK-------------EKNPDLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTL 108
Query: 195 RDLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC
Sbjct: 109 HRLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFC 164
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
+VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 165 VVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMEDG----- 213
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P +
Sbjct: 214 -----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVS 260
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
++HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E
Sbjct: 261 HLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQ 320
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL L+K + +D++++F YS R T A N DD P K RRL L E T + +
Sbjct: 321 TLKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHAEKVRRLEALNEVIEAETARINQT 379
Query: 491 QVGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 380 MIGTVQRCLVEGISKKDPD 398
>gi|429766814|ref|ZP_19299056.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium celatum DSM
1785]
gi|429182960|gb|EKY24036.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium celatum DSM
1785]
Length = 465
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 249/460 (54%), Gaps = 50/460 (10%)
Query: 72 EVHSQGR---IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDY 128
E+ +QG Y TYGCQMN D E + ++K GY+ E AE+I NTC +R+
Sbjct: 20 ELKNQGEGKYFYIHTYGCQMNEEDSEKLSGMLKRLGYTRTEEKTE-AEIILFNTCCVREN 78
Query: 129 AEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCM--AERLKDKILDADKMV 185
AE+KV+ L LK +K+P IV + GCM E + DKIL V
Sbjct: 79 AENKVFGNLGQLKALK-------------AKNPDLIVGICGCMMQQEGMADKILKQFPYV 125
Query: 186 DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCN 245
+++ G P L V I + + EE + PV K+ V AFV++M GCN
Sbjct: 126 NIIFGTHNAYKFPEYLNRVKTEGVQIKEIFNKEEEIVEGLPVD-RKSDVKAFVTIMYGCN 184
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
N C++CIVP+ RGRERSR E I+KE+ EL G KE+TLLGQNVNSY G+E EV
Sbjct: 185 NFCTYCIVPYVRGRERSRKPEDILKEIKELVANGYKEITLLGQNVNSYG--KGLENEVS- 241
Query: 306 GANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRD 364
FA+LL R+ E + R R+ + HPKD D+++ +++
Sbjct: 242 ----------------------FAELL-RMINEIDGLERVRFMTSHPKDLNDDVIKAIKE 278
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
+C+ IHLP Q+G++ +L++M R YTRE YL ++ KI++ IPDV L++D I GF GET
Sbjct: 279 CGKLCEQIHLPVQSGSNRILKKMNRHYTREYYLLVLNKIKREIPDVALTTDIIVGFPGET 338
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
EE+ DTL L+K V YD A+ F YS R T A +D V +E K R L+EA +
Sbjct: 339 EEDFIDTLELVKEVKYDAAFTFIYSRRNNTPADM-MLDQVNDEDKHNRFNRLVEAVNSNV 397
Query: 485 GQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G + VLVEG +K +++L G++ G V F
Sbjct: 398 IAQNKAYEGKIVEVLVEGTSKN-DESKLSGRTRNGRLVNF 436
>gi|253316429|ref|ZP_04839642.1| hypothetical protein SauraC_09846 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
Length = 514
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 252/446 (56%), Gaps = 45/446 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+ EV EL +EG KE+TLLGQNVNSY G + + E
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSY------------GKDLQDRE------ 280
Query: 320 KVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q+
Sbjct: 281 ------YDLGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQS 332
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL V
Sbjct: 333 GNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDEV 392
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
G++ AY + YS R+ T A + D+VP VK+ RL L + + G V
Sbjct: 393 GFEHAYTYLYSQRDGTPAAK-MKDNVPLNVKKERLQRLNKKVGHYSQIAMSKYEGQTVTV 451
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
L EG +KK D L G +D+ V F
Sbjct: 452 LCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|337288524|ref|YP_004627996.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Thermodesulfobacterium sp. OPB45]
gi|334902262|gb|AEH23068.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Thermodesulfobacterium geofontis OPF15]
Length = 448
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 258/459 (56%), Gaps = 56/459 (12%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+ R+Y +T+GCQMN ND E + I+ + Y N PE A++I INTC++R+ + K +
Sbjct: 2 KKRVYIKTFGCQMNENDTE-KMYILLSDEYEPTSN-PEEADLILINTCSVREKPQFKAFS 59
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAY 194
+ + +LK+ K P I+ V GC+A++ +K++ +D+V G +
Sbjct: 60 EVGRYKYLKK-------------KKPDLIIGVTGCVAQQEGEKLIQRLPYIDLVLGTQGF 106
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISP---------VRISKNSVTAFVSVMRGCN 245
+ LE + +K + E D P + + VTA+V++M+GC+
Sbjct: 107 YFIKEALETLKKNKKPV----VFTELKPDFKPPLILDKENKLSLENKKVTAYVTIMQGCD 162
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
N CS+CIVP+ RGRE SR E I+KEV EL K GV+EVTLLGQNVNSY G++++ P
Sbjct: 163 NFCSYCIVPYVRGREISRNPEDILKEVKELVKNGVREVTLLGQNVNSY----GIKEKNYP 218
Query: 306 GANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
F +LL+ +S R R+T+ HPKD D+L+ ++ +
Sbjct: 219 D---------------------FPELLNMISQIENLWRIRFTTSHPKDLSDKLIKVIAEN 257
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETE 425
P VCK+IHLP Q G++ +L++M R YT+E YL+ V+K++ +PD+ +++D I GF GE+E
Sbjct: 258 PKVCKHIHLPLQAGSNKILKKMNRKYTKEEYLEKVEKLKDAVPDIAITTDIIVGFPGESE 317
Query: 426 EEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG 485
E+ +TL +++ V Y + F YS R T A + + +PEE K+RRL + + + T
Sbjct: 318 EDFKETLEMLEKVRYHEIFSFKYSDRPFTLAQK-LENKIPEEEKERRLKIVHQIQAKITK 376
Query: 486 QCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ Y+S VG VLVEGP+ K P+ L+G++ V F
Sbjct: 377 EIYESYVGKEVEVLVEGPSAKDPNM-LMGRTTTNVIVNF 414
>gi|59800506|ref|YP_207218.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
gonorrhoeae FA 1090]
gi|75356482|sp|Q5FAI1.1|MIAB_NEIG1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|59717401|gb|AAW88806.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
Length = 442
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/438 (38%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +LS++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|240013351|ref|ZP_04720264.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
[Neisseria gonorrhoeae DGI18]
gi|240015796|ref|ZP_04722336.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
[Neisseria gonorrhoeae FA6140]
gi|240120424|ref|ZP_04733386.1| Bifunctional enzyme involved in thiolation and methylation of tRNA
[Neisseria gonorrhoeae PID24-1]
gi|268598198|ref|ZP_06132365.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268602776|ref|ZP_06136943.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268582329|gb|EEZ47005.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268586907|gb|EEZ51583.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
Length = 442
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/438 (38%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +LS++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLAEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|225174619|ref|ZP_03728617.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
1]
gi|225169746|gb|EEG78542.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
1]
Length = 457
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/446 (38%), Positives = 242/446 (54%), Gaps = 49/446 (10%)
Query: 84 YGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFL 143
+GCQMN D E + + GY EV V E A+++ +NTCA+R AE KV+ R+ L
Sbjct: 14 FGCQMNERDAETLRGFLDEIGYEEVDEV-EGADLVIMNTCAVRQKAEEKVFGRIGRLGVL 72
Query: 144 KREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPRLL 201
K+E + + I V GCM E + KI + VD++ G P LL
Sbjct: 73 KKENPEMM------------IAVCGCMVQQEDVAKKIKKSYPFVDLIFGTHNIAAFPELL 120
Query: 202 EEVDYGQKGINTLLSLEETYADIS---PVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+ ++ T+L L + D+ PV K+ V A+V++ GCNN CS+CIVP+ RG
Sbjct: 121 QRAAESKE---TVLDLWDEAGDVVEGLPV-TRKDGVKAWVNITYGCNNFCSYCIVPYVRG 176
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERSR E I+ E+ L K+G KEVTLLGQNVNSY +E+E++
Sbjct: 177 RERSRKPEEIINEIKALAKQGFKEVTLLGQNVNSYG--KDLEEEMD-------------- 220
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
FADLL R+ E R R+ + HP+DF ++L +M + +VC+++HLP Q
Sbjct: 221 ---------FADLLVRVDRETDINRIRFMTSHPRDFTEKLAKVMGECDSVCEHVHLPIQA 271
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ +L+ M RGYT+E YLDLV +R+ PD LS+D I GF GETEE+ DTL ++ V
Sbjct: 272 GSNRILKLMNRGYTKEHYLDLVDILRKYAPDCALSTDIIVGFPGETEEDFLDTLDVVDRV 331
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
GYDMA+ F YS R T A + V EVK+ R L+E + + + VG V
Sbjct: 332 GYDMAFTFLYSPRSGTPAA-DMPHQVANEVKKERFQRLLEVQNKHSLRHNQEAVGKTVEV 390
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEGP+K P + G++ V F
Sbjct: 391 LVEGPSKTDPGV-MTGRTRSSKTVNF 415
>gi|386714414|ref|YP_006180737.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halobacillus halophilus
DSM 2266]
gi|384073970|emb|CCG45463.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halobacillus halophilus
DSM 2266]
Length = 523
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 256/453 (56%), Gaps = 47/453 (10%)
Query: 76 QGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
+G+ Y TYGCQMN +D E++ I + GY + E A++I +NTCAIR+ AE+KV+
Sbjct: 79 KGKKYMIRTYGCQMNEHDTEVMAGIFEEMGYESTSDTKE-ADIILLNTCAIRENAENKVF 137
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPD 192
+ + LK E N+ G V GCM+ E + ++IL +D++ G
Sbjct: 138 GEIGHLKPLKME-NPNLIIG-----------VCGCMSQEESVVNRILKKHPFIDLIFGTH 185
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+L++E +G++ + + S E + P R K + A+V++M GC+ C++CI
Sbjct: 186 NIHRLPQLVKEAMFGKEMVIDVWSKEGDIIENLP-RSRKGKIKAWVNIMYGCDKFCTYCI 244
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG+ERSR I++EV L +G KEVTLLGQNVN+Y G + ++E G
Sbjct: 245 VPYTRGKERSRLPADIIQEVRHLAAQGYKEVTLLGQNVNAY----GKDLDLEYG------ 294
Query: 313 EGFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
DL+D L S++ P R R+T+ HP+DF D L+ ++ N+ +
Sbjct: 295 ---------------LGDLMDELRSIDIP--RVRFTTSHPRDFDDRLIEVLSKGGNMLDH 337
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLP Q+GN+ VL+ M R Y+RE YL+LV++IR+ +PD L++D I GF ETEE+ DT
Sbjct: 338 IHLPVQSGNTDVLKIMGRKYSREEYLELVKRIRKSMPDATLTTDIIVGFPNETEEQFQDT 397
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L+L++ VG++ AY F YS RE T A + D+V E K+ RL L + E + +
Sbjct: 398 LSLVEEVGFEAAYTFIYSPRENTPAAK-MKDNVSMEEKKDRLQRLNKLVNEQSAEAMKQY 456
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VLVEG +K + L G + R V F
Sbjct: 457 EGEIVHVLVEGESKNNEEV-LAGYTKRNKLVNF 488
>gi|417656560|ref|ZP_12306243.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU028]
gi|329736221|gb|EGG72493.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus
epidermidis VCU028]
Length = 514
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 256/456 (56%), Gaps = 50/456 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GYS ++ E A+VI INTCAIR+ AE+KV
Sbjct: 65 GKGRTFLIKTYGCQMNAHDTEVMAGILNALGYSATSDINE-ADVILINTCAIRENAENKV 123
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LK+E P ++ V GCM+ E + +KIL + + VD+V G
Sbjct: 124 FSEIGNLKHLKKE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMVFG 170
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 171 THNIHHLPEILEEAYLSKAMVVEVWSKEGDIIENLP-KVRDGHIKAWVNIMYGCDKFCTY 229
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANW 309
CIVPFTRG+ERSR E I+ EV EL +EG +E+TLL QNVNSY D G++ E
Sbjct: 230 CIVPFTRGKERSRRPEDIIDEVRELAREGYQEITLLDQNVNSYGKDIEGLDYE------- 282
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
DLL+ +S ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 283 ------------------LGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIAKGGNI 322
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+IHLP Q+GN+ VL+ M R YTRE+YLDLV +I++ IP+V L++D I G+ ETEE+
Sbjct: 323 VPHIHLPVQSGNNQVLKIMGRKYTRESYLDLVSRIKEAIPNVALTTDIIVGYPNETEEQF 382
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L V ++ AY + YS R+ T A + D+VP EVK+ RL L + + Q
Sbjct: 383 EETLSLYDDVQFEHAYTYLYSQRDGTPAAK-MKDNVPLEVKKERLQRLNKKVGIYSQQAM 441
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VL EG +KK + L G +D+ V F
Sbjct: 442 SQYEGKIVTVLCEGSSKKDENV-LAGYTDKNKLVNF 476
>gi|329118626|ref|ZP_08247330.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria bacilliformis
ATCC BAA-1200]
gi|327465361|gb|EGF11642.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria bacilliformis
ATCC BAA-1200]
Length = 443
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/435 (37%), Positives = 244/435 (56%), Gaps = 42/435 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNA-GYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D E +L++++ G E + P++A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLAVLEEEHGGIEQVAEPDDADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK + K + I V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVKPLKEKNPKLI------------IGVAGCVASQEGENIVKRAPYVDVVFGPQTLHR 110
Query: 197 LPRLLEEVDY-GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP+++ + + G ++ E + + P R+ S AF+S+M GC+ CSFC+VP+
Sbjct: 111 LPKMIADKETSGYAQVDISFPEIEKFDHLPPARVEGGS--AFISIMEGCSKYCSFCVVPY 168
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y GA + +G
Sbjct: 169 TRGEEFSRPLNDVLTEIAGLAQQGVKEINLLGQNVNAYR-----------GA---MDDG- 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++HL
Sbjct: 214 -GICD-------FATLL-RIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSHLHL 264
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL L
Sbjct: 265 PIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKL 324
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+K + +D++++F YS R T A N DD P K RRL L E T + + +GT
Sbjct: 325 VKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHAEKVRRLEALNEVIEAETARINQTMLGT 383
Query: 495 VQLVLVEGPNKKAPD 509
VQ LVEG +KK PD
Sbjct: 384 VQRCLVEGISKKDPD 398
>gi|392971900|ref|ZP_10337292.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus equorum
subsp. equorum Mu2]
gi|403046776|ref|ZP_10902245.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
sp. OJ82]
gi|392509613|emb|CCI60582.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus equorum
subsp. equorum Mu2]
gi|402763472|gb|EJX17565.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
sp. OJ82]
Length = 513
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 259/455 (56%), Gaps = 48/455 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
QG+ + +TYGCQMN +D E++ I+ GY+ ++ +A+VI INTCAIR+ AE KV
Sbjct: 64 GQGKTFLIKTYGCQMNAHDTEVMAGILGALGYTATEDI-NHADVILINTCAIRENAESKV 122
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ + LKRE + V I V GCM+ E + +KIL + + VD++ G
Sbjct: 123 FSEIGNLKHLKREKPETV------------IGVCGCMSQEESVVNKILKSYQNVDIIFGT 170
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +LEE + + + S E + P ++ K ++ A+V++M GC+ C++C
Sbjct: 171 HNIHRLPEILEEAYLSKAMVVEVWSKEGDVIENLP-KVRKGNIKAWVNIMYGCDKFCTYC 229
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWR 310
IVPFTRG+ERSR E I+ EV +L ++G +E+TLLGQNVN+Y D G+E
Sbjct: 230 IVPFTRGKERSRRPEDIIAEVRDLARQGYQEITLLGQNVNAYGKDIEGLE---------- 279
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
GL DLL+ ++ ++ P R R+T+ HP DF D ++ ++ + N+
Sbjct: 280 -------------YGL--GDLLEDITQIDIP--RVRFTTSHPWDFTDRMIEVIANGGNIV 322
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
++HLP Q+GN+AVL+ M R YTRE+YLDLV +I+ IP+V L++D I G+ ETE +
Sbjct: 323 PHVHLPVQSGNNAVLKIMGRKYTRESYLDLVNRIKTKIPNVALTTDIIVGYPNETEAQFE 382
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
+TLTL V ++ AY + YS R+ T A + D+VP EVK+ RL +L + + Q
Sbjct: 383 ETLTLYDEVEFEHAYTYIYSQRDGTPAAK-MKDNVPLEVKKDRLQQLNKKVAYYSEQAMK 441
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VL EG +KK + L G + + V F
Sbjct: 442 QYEGKVIQVLCEGASKK-DNAVLAGYTSKNKLVNF 475
>gi|345870036|ref|ZP_08821991.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Thiorhodococcus drewsii AZ1]
gi|343922423|gb|EGV33125.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Thiorhodococcus drewsii AZ1]
Length = 443
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 251/448 (56%), Gaps = 38/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + + + E+ PE A+V+ +NTC++R+ A+ KV+ +L
Sbjct: 4 KLYIQTFGCQMNEYDSARIADALHESMGLELTETPEEADVLLLNTCSVREKAQEKVFSQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
W R WK + P ++ V GC+A + + I D VD+V GP
Sbjct: 64 GR-W---RPWK---------AARPDLVIGVGGCVASQEGEAIRDRAPYVDLVFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP++L+++ ++ + E D P ++ TAFVSVM GC+ C++CIVPFT
Sbjct: 111 LPQMLKDLRAERRAQVDVSFPEIEKFDCLPAHKAEGP-TAFVSVMEGCSKYCTYCIVPFT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L ++GV+EV LLGQNVN+Y + E E GA L
Sbjct: 170 RGEEISRPLDDVIAEVAGLAEQGVREVNLLGQNVNAYRGEMA-DAEGETGALSLL----- 223
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+R+ ++ + R R+T+ HP +F D+L+ + + P + ++HLP
Sbjct: 224 ---------IRYVAAIEGIE------RIRFTTSHPVEFSDDLIEVFAEVPELVSFLHLPV 268
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L M+RG+T Y D ++++R + PD+ +SSDFI GF GETEE+ ADTL L+
Sbjct: 269 QSGSDRILAAMKRGHTAAEYADKIRRLRLVRPDISISSDFIVGFPGETEEDFADTLALVD 328
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
+G+D ++ F YS R T A +Y DDV VK+ RL L + + + VGTVQ
Sbjct: 329 EIGFDHSFSFVYSRRPGTPAA-DYSDDVSLAVKKERLERLQQRISTNAQRISRQMVGTVQ 387
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP++K P +L G+++ V F
Sbjct: 388 RVLVEGPSRKDP-AQLSGRTENNRVVNF 414
>gi|422745475|ref|ZP_16799414.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320140890|gb|EFW32737.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus MRSA131]
Length = 514
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 252/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLNVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLSGYTDKNKLVNF 476
>gi|116747867|ref|YP_844554.1| RNA modification protein [Syntrophobacter fumaroxidans MPOB]
gi|229891028|sp|A0LFB7.1|MIAB_SYNFM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|116696931|gb|ABK16119.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Syntrophobacter
fumaroxidans MPOB]
Length = 456
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 251/473 (53%), Gaps = 58/473 (12%)
Query: 55 PLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPEN 114
PLA APA +Y T+GCQMN D + L ++ GY ++ +
Sbjct: 4 PLAKTAPAPRY-------------LYVRTFGCQMNEYDSQRALRLLCAVGYRPTSDI-AD 49
Query: 115 AEVIFINTCAIRDYAEHKVWQRLNYFWFLK--REWKKNVATGRSQSKHPPKIVVLGCMAE 172
A+VIF+NTC++RD AE KV+ L LK R W K IVV GC+A+
Sbjct: 50 ADVIFLNTCSVRDKAEQKVYSFLGRLRRLKAHRPWLK--------------IVVAGCVAQ 95
Query: 173 RLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVR-ISK 231
+L D +L + VD+V G + LLEEV+ ++ + L + E R +
Sbjct: 96 QLGDGLLKRFEHVDLVVGTRGIGSIASLLEEVERSKRRVAHLPAEELQGFTTDKCRTVGT 155
Query: 232 NSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVN 291
V A V++M+GCNN C++CIVP RGRERSR + I++E+D L G +EV LLGQNVN
Sbjct: 156 GDVVAQVTIMQGCNNFCTYCIVPHVRGRERSRAPDDILREIDFLASRGAREVLLLGQNVN 215
Query: 292 SYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHP 351
SY G+ + F DLL R+ E R R+T+ HP
Sbjct: 216 SYG--RGLPDPIS-----------------------FPDLLRRIGKETSIRRVRFTTSHP 250
Query: 352 KDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVG 411
KD ++L+ P +CK++HLP Q+G+ +L+ M RGYT YL+ + ++R++ P++
Sbjct: 251 KDLTEDLIECFAGLPFLCKHLHLPFQSGSDGILKLMHRGYTARQYLEKIARLREVCPEIA 310
Query: 412 LSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQR 471
LS+D I GF E+EE++ TL L++ V +D + F YS R T A + D VP +VK R
Sbjct: 311 LSTDVIVGFPAESEEDYLQTLRLIEEVRFDSLFSFRYSDRPLTRAA-GFPDKVPMDVKVR 369
Query: 472 RLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
RL L + T Q ++ GTV+ VLVEGP+ KA + ++ G++ + + F
Sbjct: 370 RLARLQSIQADITLQKNLAETGTVREVLVEGPS-KASNGQMTGRTQQNRIINF 421
>gi|349610641|ref|ZP_08889976.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Neisseria
sp. GT4A_CT1]
gi|348609624|gb|EGY59358.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Neisseria
sp. GT4A_CT1]
Length = 442
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 168/439 (38%), Positives = 246/439 (56%), Gaps = 50/439 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM--KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+++ T+GCQMN D E +L+++ +N G +V E A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLAVLAEENGGIEQVTEADE-ADIILFNTCSVREKAQEKVFS 61
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 62 DLGRVRPLK-------------EKNPDLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTL 108
Query: 195 RDLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC
Sbjct: 109 HRLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFC 164
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
+VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 165 VVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMEDG----- 213
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P +
Sbjct: 214 -----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVS 260
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
++HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E
Sbjct: 261 HLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQ 320
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL L+K + +D++++F YS R T A N DD P K RRL L E T + +
Sbjct: 321 TLKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHTEKVRRLEALNEVIEAETARINQT 379
Query: 491 QVGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 380 MIGTVQRCLVEGISKKDPD 398
>gi|118590489|ref|ZP_01547891.1| hypothetical protein SIAM614_02901 [Stappia aggregata IAM 12614]
gi|118436952|gb|EAV43591.1| hypothetical protein SIAM614_02901 [Stappia aggregata IAM 12614]
Length = 491
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/471 (35%), Positives = 255/471 (54%), Gaps = 42/471 (8%)
Query: 53 SQPLADL-APASEVSSATGSEVHSQG---RIYQETYGCQMNVNDMEIVLSIMKNAGYSEV 108
S+P DL A+ VS+A ++ G +++ TYGCQMNV D E + ++ G+ E
Sbjct: 3 SRPEQDLETNATVVSAADMTDARKGGNTRKVFVRTYGCQMNVYDSERMTDVLAPEGF-EA 61
Query: 109 INVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLG 168
+ E+A+++ +NTC IR+ A KV+ L +K E R++S + V G
Sbjct: 62 TDDLEDADLVILNTCHIREKAAEKVYSELGRIRKVKEE--------RAKSGKDMMVGVAG 113
Query: 169 CMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISP-- 226
C+A+ ++I +VD+V GP +Y LP LLE+ G K + T ++ + +S
Sbjct: 114 CVAQAEGEEISRRAPIVDLVVGPQSYHQLPSLLEKARAGSKVVETEFDIDAKFNHLSERA 173
Query: 227 -VRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTL 285
++ K +AF++V GC+ C+FC+VP+TRG E SR VE IV E + + GV+E+TL
Sbjct: 174 EKQVLKRPPSAFLTVQEGCDKFCTFCVVPYTRGAEVSRSVEQIVSEAERMAAVGVREITL 233
Query: 286 LGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFR 345
LGQNVN+Y+ S GA W L + ++ D LDRL R
Sbjct: 234 LGQNVNAYHGAS------PDGAVWGLGRLLRRLSEI--------DGLDRL---------R 270
Query: 346 YTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQ 405
YT+ HP+D D+L+ RD ++ Y+HLP Q+G+ +L+ M R +TR+ Y L+ +IR+
Sbjct: 271 YTTSHPRDMDDDLIAAHRDLKSLMPYLHLPVQSGSDKILKAMNRRHTRDEYFRLIDRIRE 330
Query: 406 IIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVP 465
PD+ LS DFI GF GE++++ DT+ L++ VGY A+ F YS R T D VP
Sbjct: 331 AAPDIALSGDFIVGFPGESDQDFEDTMDLIRQVGYGSAFSFKYSSRPGTPGA-TMDDQVP 389
Query: 466 EEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
E+VK RL EL E S++G VL+E + +LVGKS
Sbjct: 390 EDVKSARLAELQALVAEQQKAFNASRLGMTCDVLLEKTGRNP--GQLVGKS 438
>gi|387142900|ref|YP_005731293.1| radical SAM superfamily protein [Staphylococcus aureus subsp.
aureus TW20]
gi|269940783|emb|CBI49165.1| radical SAM superfamily protein [Staphylococcus aureus subsp.
aureus TW20]
Length = 514
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 251/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVLSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLNVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|15895113|ref|NP_348462.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
acetobutylicum ATCC 824]
gi|337737055|ref|YP_004636502.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
acetobutylicum DSM 1731]
gi|384458563|ref|YP_005670983.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
gi|81530267|sp|Q97I18.1|MIAB_CLOAB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|15024813|gb|AAK79802.1|AE007692_10 Predicted Fe-S oxidoreductase, YMCB B.subtilis ortholog
[Clostridium acetobutylicum ATCC 824]
gi|325509252|gb|ADZ20888.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
gi|336292982|gb|AEI34116.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
acetobutylicum DSM 1731]
Length = 441
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/448 (37%), Positives = 251/448 (56%), Gaps = 45/448 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ET+GCQMN D E + ++K Y E + E+A++I NTC +R+ AE KV+ L
Sbjct: 8 FIETWGCQMNAEDSEKLAGMLKEMKY-EATDNREDADLIIFNTCCVRENAELKVYGNLGT 66
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRD 196
LK K P I+ V GCM ++ + + I VD+V G +
Sbjct: 67 LKKLK-------------DKKPNLIITVCGCMMQQRDMAEHIKKRFPFVDIVMGTHNTQM 113
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+ L++V+ + + + EE + P+ S + + AFV++M GCNN C++CIVP+
Sbjct: 114 FPQYLKKVENERTSVVEIWDKEEGIVEGMPIYRSYD-MKAFVTIMYGCNNFCTYCIVPYV 172
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR E I E+ EL K+G KE+TLLGQNVNSY + L E N
Sbjct: 173 RGRERSRKPEDIENEIKELVKKGYKEITLLGQNVNSYGKS--------------LDEEMN 218
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LL RL+ +R R+ + HPKD D+++ + D VC++IHLP
Sbjct: 219 -----------FALLLRRLNNIEGLLRIRFMTSHPKDLTDDVIAAIADCDKVCEHIHLPV 267
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L +M R YTRE Y++LV KI+ I +V +++D I GF GETEE+ DTL+L+K
Sbjct: 268 QSGSTTILNKMNRNYTREDYINLVNKIKSGIKNVAITTDIIVGFPGETEEDFEDTLSLVK 327
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD A+ F YS+RE T A + Y + +P+EVK +R +L+EA + + G +
Sbjct: 328 EVEYDSAFTFLYSIREGTPAAK-YENQIPDEVKHKRFNKLLEAVNLISEKKNKEYEGKIV 386
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+LVEG +K ++L+G++ G V F
Sbjct: 387 EILVEGKSKN-DGSKLMGRTRTGKLVNF 413
>gi|384107955|ref|ZP_10008852.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Treponema sp. JC4]
gi|383870339|gb|EID85942.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Treponema sp. JC4]
Length = 457
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 250/460 (54%), Gaps = 50/460 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGC+MN+ + V ++ G++ V + A++ INTC++R+ AE+++ RL +
Sbjct: 5 FFETYGCEMNIAESAAVEQLLIARGWT-VAKSAQVADMAIINTCSVRETAENRIMGRLGW 63
Query: 140 FWFLKREWKKNVATGRSQ----------SKHPPKIVVLGCMAERLKDKILDADKMVDVVC 189
F LK K + P IVV+GCMAERL +D V
Sbjct: 64 FNGLKAVRAKKLGAKTKMLDEAVEYVKDGAKPLTIVVMGCMAERLLKSFQKDFPFIDYVV 123
Query: 190 GPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
G A ++ V+ G+K S +A +S + + FV +M GCNN C+
Sbjct: 124 GTYAKHHFSEIISAVEEGRKPFEVDDSELYKFASVSA---EPGAFSTFVPIMHGCNNFCT 180
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
+CIVP+ RGRE SRPV I++E+D L GVKE+TL+GQNVNSY D
Sbjct: 181 YCIVPYVRGREISRPVSEILRELDILNGYGVKEITLIGQNVNSYKDGD------------ 228
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMR-----FRYTSPHPKDFPDELLYIMRD 364
FA LL ++ E + R+ S HPKDF D+++ ++
Sbjct: 229 ----------------TNFAGLLQIIADHLRETKSGIQWVRFMSSHPKDFTDDVIDVIAK 272
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
+C++IHLP Q G++AVL+ M R YTRE YLDLV +I+ IPDV L++D + GF GET
Sbjct: 273 EEVICRHIHLPVQHGSTAVLKAMNRRYTREQYLDLVSRIKARIPDVSLTTDIMMGFPGET 332
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
E++ DTL LM+ V Y+ A M+ Y+ RE T A + ++ +PE+V++ RL +I+ E T
Sbjct: 333 EQDVEDTLDLMRQVKYESAMMYYYNPREGTPAAK--MEQLPEQVRKDRLQRVIDLQLEHT 390
Query: 485 GQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +VG+V VLVE ++ TEL+G++++ +VAF
Sbjct: 391 HEQMIKRVGSVMKVLVESISRD-DKTELLGQTEQHEKVAF 429
>gi|295706204|ref|YP_003599279.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus megaterium DSM
319]
gi|294803863|gb|ADF40929.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus megaterium DSM
319]
Length = 509
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 172/453 (37%), Positives = 252/453 (55%), Gaps = 44/453 (9%)
Query: 75 SQGR-IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
QGR Y TYGCQMN +D E++ I GY +V E+A VI +NTCAIR+ AE+KV
Sbjct: 63 GQGRKFYIRTYGCQMNEHDTEVMAGIFLGLGYEPTDSV-EDAHVILLNTCAIRENAENKV 121
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ L + LKRE + + I V GCM+ E + +KIL + VD++ G
Sbjct: 122 FGELGHLKALKRERPELL------------IGVCGCMSQEESVVNKILQKHQHVDMIFGT 169
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +L E ++ + + S E + P R K SV A+V++M GC+ C++C
Sbjct: 170 HNIHRLPHILNEAYLAKEMVIEVWSKEGDVIENLP-RARKGSVKAWVNIMYGCDKFCTYC 228
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVP+TRG+ERSR E I++EV L +G KE+TLLGQNVN+Y G ++
Sbjct: 229 IVPYTRGKERSRRPEDIIQEVRHLAAQGYKEITLLGQNVNAY------------GKDF-- 274
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+ + DL+D + + R R+T+ HP+DF D L+ ++ N+ +
Sbjct: 275 ----------EDITYGLGDLMDEIR-KIDVARIRFTTSHPRDFDDRLIEVLAKGGNLVDH 323
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLP Q+G+S +L+ M R Y+RE YL+LV+KI++ IP L++D I GF ET+E+ +T
Sbjct: 324 IHLPVQSGSSDILKIMARKYSREHYLELVRKIKEAIPTASLTTDIIVGFPNETDEQFEET 383
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
++L + V +D AY F YS RE T A + D+VP EVK+ RL L E + +
Sbjct: 384 MSLYREVEFDSAYTFIYSPREGTPAAK-MQDNVPMEVKKERLQRLNALVNEISAKKLKEY 442
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K P+ L G +++ V F
Sbjct: 443 EGKVVEVLVEGESKNNPEV-LAGYTEKSKLVNF 474
>gi|443639819|ref|ZP_21123820.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21196]
gi|443406470|gb|ELS65050.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21196]
Length = 514
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 252/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C +CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCIYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ IP+V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIPNVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|169827222|ref|YP_001697380.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Lysinibacillus
sphaericus C3-41]
gi|229890559|sp|B1HR59.1|MIAB_LYSSC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|168991710|gb|ACA39250.1| UPF0004 protein [Lysinibacillus sphaericus C3-41]
Length = 514
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 256/450 (56%), Gaps = 47/450 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
Y TYGCQMN +D E++ I GY+ + E A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 70 FYIRTYGCQMNEHDTEVMAGIFMQLGYTPT-EIIEEADVVLLNTCAIRENAENKVFGELG 128
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ KR K+P ++ V GCM+ E + +KIL + VD+V G
Sbjct: 129 FLLKYKR-------------KNPEMLIGVCGCMSQEESVVNKILRSYPHVDMVFGTHNIH 175
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L+E ++ + + S E + P + S+ A+V++M GC+ C++CIVP+
Sbjct: 176 RLPNILKEAYMSKEMVVEVWSKEGDVIENLPKK-RLGSIKAWVNIMYGCDKFCTYCIVPY 234
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I+ EV EL G +E+ LLGQNVN+Y G ++
Sbjct: 235 TRGKERSRRPEEIIAEVRELAAAGYQEIMLLGQNVNAY------------GKDF------ 276
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + R DL+D L ++ P R R+T+ HP+DF D L+ ++ R N+ ++IHL
Sbjct: 277 ------EDIEYRLGDLMDALRKIDIP--RIRFTTSHPRDFDDHLIEVLAKRGNLVEHIHL 328
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE +L LV+KI+ IP+V L++D I G+ ETEE+ +TL+L
Sbjct: 329 PVQSGSNDILKIMARKYTREHFLTLVEKIKAAIPEVTLTTDIIVGYPNETEEQFEETLSL 388
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG++ A+ + YS RE T A + VD+VPEEVK+ RL L E E + + + G
Sbjct: 389 YREVGFEAAFTYIYSPREGTPAAK-MVDNVPEEVKKERLQRLNEVVGEYSRKALERLNGE 447
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K+ D L G + + V F
Sbjct: 448 VVEVLVEGTSKRRDDV-LAGYTRKNRLVNF 476
>gi|91202951|emb|CAJ72590.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 447
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 248/448 (55%), Gaps = 45/448 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
++ ET+GCQMN D E+ L +++ GYS +++ E A+VI NTC++R +AE KV+ L
Sbjct: 16 VFFETFGCQMNKLDAELSLGLLQEDGYS-IVDKVEEADVILYNTCSVRQHAEDKVYSHLG 74
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK+ KHP I+ VLGCMA++ I VD+VCG + L
Sbjct: 75 ALRTLKK-------------KHPDVIIGVLGCMAQKDAQSIFKRMPHVDLVCGTRMFTRL 121
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISK-NSVTAFVSVMRGCNNMCSFCIVPFT 256
P LL ++ G + L E+ D+ + + N AFV+VMRGC+N CS+CIVP+
Sbjct: 122 PELLLKIR--NHGNHVLAVDEDEIVDVKRIAAYRPNVYQAFVTVMRGCDNYCSYCIVPYV 179
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE SR + + +EV EL G +E+TLLGQN+NSY + PG
Sbjct: 180 RGREVSRTIADVEREVLELVSNGCREITLLGQNINSYGKSL-------PG---------- 222
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ DLL L+ R R+ + HPKD +L+ M C+Y+H+PA
Sbjct: 223 --------NITLGDLLIELNGIEKLERLRFVTSHPKDMSRDLIRTMSQLDKACEYLHMPA 274
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L++M RGYT Y +L+Q R ++P + ++ DFI GF GETEE+ +T+ LM+
Sbjct: 275 QSGSDRILKKMHRGYTAGYYRELIQYARDLMPTIKVAGDFIVGFPGETEEDFQETVCLME 334
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
+ + +++F YS R T A DDVP+E+K++R T L++ ++ + + +G
Sbjct: 335 DIRFQNSFIFKYSTRTGTKAAE-LTDDVPDEIKKKRNTTLLDLQKKISLEENKKLIGRKL 393
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K P+ +L G++ + + V F
Sbjct: 394 QVLVEGASKSDPN-KLSGRTRQNNIVVF 420
>gi|254501345|ref|ZP_05113496.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Labrenzia alexandrii
DFL-11]
gi|222437416|gb|EEE44095.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Labrenzia alexandrii
DFL-11]
Length = 486
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 251/469 (53%), Gaps = 43/469 (9%)
Query: 53 SQPLADL--APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVIN 110
S+P A+L + A+E +A+G +++ TYGCQMNV D E + ++ GYS +
Sbjct: 3 SRPEAELDTSAAAETKTASGDNTR---KVFVRTYGCQMNVYDSERMTDVLAPQGYSTTAD 59
Query: 111 VPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCM 170
+ E A+++ +NTC IR+ A KV+ L +K E R+++ + V GC+
Sbjct: 60 M-EEADLVILNTCHIREKAAEKVYSELGRIRKVKEE--------RAKAGKDMMVGVAGCV 110
Query: 171 AERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVR-- 228
A+ ++I +VD+V GP +Y LP LL++ GQK + T ++ + +S
Sbjct: 111 AQAEGEEISRRAPIVDMVVGPQSYHQLPSLLDKARQGQKVVETEFDIDAKFDHLSARAEK 170
Query: 229 -ISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLG 287
I K AF++V GC+ C+FC+VP+TRG E SR VE IV E + GV+EVTLLG
Sbjct: 171 PIMKRPPAAFLTVQEGCDKFCTFCVVPYTRGAEVSRSVEQIVTEAQRMAASGVREVTLLG 230
Query: 288 QNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYT 347
QNVN+Y+ E G+ W L + + ++ D LDRL RYT
Sbjct: 231 QNVNAYH------GEAADGSTWGLGKLLRRLSEI--------DGLDRL---------RYT 267
Query: 348 SPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII 407
+ HP+D D+L+ R+ ++ Y+HLP Q+G+ +L+ M R +TR+ Y L+ +IR
Sbjct: 268 TSHPRDMDDDLIEAHRELKSLMPYLHLPVQSGSDKILKAMNRKHTRDEYFRLIDRIRVAA 327
Query: 408 PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEE 467
PD+ LS DFI GF GET+++ DT+ L++ V Y A+ F YS R T D VPE+
Sbjct: 328 PDIALSGDFIIGFPGETDQDFEDTMDLIRRVEYGSAFSFKYSQRPGTPGA-TMEDQVPED 386
Query: 468 VKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
VK RL EL E S+ G VL+E + +LVGKS
Sbjct: 387 VKSVRLQELQALLSEQQKAFNASRKGMTCDVLLEKKGRNP--GQLVGKS 433
>gi|73662777|ref|YP_301558.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|123775346|sp|Q49X85.1|MIAB_STAS1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|72495292|dbj|BAE18613.1| putative 2-methylthioadenine synthetase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 513
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 173/458 (37%), Positives = 264/458 (57%), Gaps = 54/458 (11%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
QG+ + +TYGCQMN +D E++ I+ GY+ ++ +A+VI INTCAIR+ AE+KV
Sbjct: 64 GQGKTFLIKTYGCQMNAHDTEVMAGILGALGYTPTEDI-NHADVILINTCAIRENAENKV 122
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ + LK+E + V I V GCM+ E + +KIL + + VD++ G
Sbjct: 123 FSEIGNLKHLKKEKPETV------------IGVCGCMSQEESVVNKILKSYQNVDMIFGT 170
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +LEE + + + S E + P ++ + ++ A+V++M GC+ C++C
Sbjct: 171 HNIHRLPEILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYC 229
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWR 310
IVPFTRG+ERSR E I+ EV +L ++G KE+TLLGQNVN+Y D G+
Sbjct: 230 IVPFTRGKERSRRPEDIIDEVRDLARQGYKEITLLGQNVNAYGKDIDGL----------- 278
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
DLL+ +S ++ P R R+T+ HP DF D ++ ++ + N+
Sbjct: 279 --------------AYGLGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIANGGNIV 322
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
++HLP Q+GN+AVL+ M R YTRE+YLDLV +I+ IP+V L++D I G+ ET+E+
Sbjct: 323 PHVHLPVQSGNNAVLKIMGRKYTRESYLDLVNRIKTHIPNVALTTDIIVGYPNETDEQFE 382
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL---IEAFRESTGQ 486
+TLTL V ++ AY + YS R+ T A + D+VP +VK+ RL +L + + E Q
Sbjct: 383 ETLTLYDEVEFEHAYTYIYSQRDGTPAAK-MNDNVPLDVKKDRLQQLNKKVACYSERAMQ 441
Query: 487 CYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Y+ Q TVQ VL EG +KK DT L G + + V F
Sbjct: 442 QYEGQ--TVQ-VLCEGVSKK-DDTVLSGYTSKNKLVNF 475
>gi|375107643|ref|ZP_09753904.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Burkholderiales bacterium JOSHI_001]
gi|374668374|gb|EHR73159.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Burkholderiales bacterium JOSHI_001]
Length = 449
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 249/450 (55%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNA-GYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + + +M A GY +V E A++I NTC++R+ A+ KV+
Sbjct: 6 KVFIRTFGCQMNEYDSDKMADVMGAAEGYEPTTDV-EEADLILFNTCSVREKAQEKVFSD 64
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK KK V G V GC+A + I++ VDVV GP
Sbjct: 65 LGRVKHLK---KKGVLIG-----------VGGCVASQEGAAIIERAPYVDVVFGPQTLHR 110
Query: 197 LPRLLEE-VDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP++LE+ V G+ ++ E + + P R+ S AFVS+M GC+ C++C+VP+
Sbjct: 111 LPQMLEKRVSLGRPQVDISFPEIEKFDHLPPARVEGAS--AFVSIMEGCSKYCAYCVVPY 168
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP E ++ EV L +GVKE+TLLGQNVN+Y G G
Sbjct: 169 TRGEEVSRPFEDVLTEVAGLTDQGVKEITLLGQNVNAYRGRMG---------------GT 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M FA LL+ ++ E P + R RYT+ HP +F L+ + P + ++HL
Sbjct: 214 ADMAD-------FALLLEYVA-EIPGVERIRYTTSHPNEFTQRLIDVYAKLPQLVNHLHL 265
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT Y ++K+R + PD+ LSSDFI G+ GETE++HA TL L
Sbjct: 266 PVQHGSDRILAAMKRGYTTLEYKSTLRKLRAVRPDISLSSDFIVGYPGETEDDHAKTLKL 325
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ +G+D ++ F +S R T A DD P+ +K +RL +L + + S+ GT
Sbjct: 326 IEDIGFDASFSFVFSPRPGTPAA-ALTDDTPQALKLKRLQQLQALLESNVRRISASREGT 384
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ +LVEGP++K P+ EL+G+++ V F
Sbjct: 385 VQRILVEGPSRKDPN-ELMGRTECNRIVNF 413
>gi|84688004|ref|ZP_01015867.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Maritimibacter
alkaliphilus HTCC2654]
gi|84663985|gb|EAQ10486.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
HTCC2654]
Length = 443
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 241/446 (54%), Gaps = 43/446 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ TYGCQMNV D E + M GY EV P+ A++I +NTC IR+ A KV+ L
Sbjct: 10 KLFIRTYGCQMNVYDSERMAEAMGGQGYVEV-GSPDEADMILLNTCHIREKAAEKVYSEL 68
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F LK +K KI V GC+A+ ++I+ MVD+V GP Y L
Sbjct: 69 GRFKDLK------------DAKPDLKIGVAGCVAQAEGEEIMRRQPMVDLVVGPQTYHRL 116
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++E+V G+K ++T LE+ + + +K + TAF++V GC+ C+FC+VP+TR
Sbjct: 117 PEMVEKVGRGEKALDTDFPLEDKFEVLKNRPTAKRAPTAFLTVQEGCDKFCAFCVVPYTR 176
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRP E I++E EL + GV+E+TLLGQNVN+Y+ G +W L+ +
Sbjct: 177 GAEVSRPPERILREARELVERGVREITLLGQNVNAYHGAGD-------GGDWSLARLIWA 229
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ + D L+R+ R+T+ HP D D+L+ + + Y+HLP Q
Sbjct: 230 LNDI--------DGLERI---------RFTTSHPNDMSDDLIAAHGECAKLMPYLHLPVQ 272
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L+RM R +T E YL L+++IR PD+ +S DFI GF ET+ + DTL L++A
Sbjct: 273 SGSDRILKRMNRKHTAEEYLRLIERIRAARPDILISGDFIVGFPEETDRDFEDTLDLIRA 332
Query: 438 VGYDMAYMFAYSMRERT-HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y A+ F YS R T A R VD+ + RL LI E D VG
Sbjct: 333 VNYGQAFSFKYSSRPGTPAAERPLVDEAEASDRLHRLQALIN---EQARGVMDGMVGREI 389
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRV 522
VL E P + + ++ GKSD H V
Sbjct: 390 GVLFEKPGRM--EGQMAGKSDYLHAV 413
>gi|154245754|ref|YP_001416712.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthobacter
autotrophicus Py2]
gi|154159839|gb|ABS67055.1| RNA modification enzyme, MiaB family [Xanthobacter autotrophicus
Py2]
Length = 496
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 157/447 (35%), Positives = 241/447 (53%), Gaps = 41/447 (9%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
+H ++Y +++GCQMNV D + + G+ E + P A+++ +NTC IR+ A K
Sbjct: 27 MHEPRKLYVKSFGCQMNVYDSHRMADTLAREGFVETQD-PAEADLVILNTCHIREKAAEK 85
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
V+ L K+E + I V GC+A+ +I+ +VD+V GP
Sbjct: 86 VYSELGRLRKQKQEAGSDT-----------MIAVAGCVAQAEGAEIMRRAPVVDLVVGPQ 134
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADI-SPVRISKNS--VTAFVSVMRGCNNMCS 249
+Y LP LL E G++ ++T E+ + + +P R + S AFV+V GC+ C+
Sbjct: 135 SYHRLPELLAEAKAGKRVVDTEFPAEDKFDHLPAPTRAATRSRGPAAFVTVQEGCDKFCT 194
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
FC+VP+TRG E SRPV I+ E L +GV+E++L+GQNVN+++ G W
Sbjct: 195 FCVVPYTRGAEVSRPVAKIMDEAARLVDQGVREISLIGQNVNAFHGAG------PDGTTW 248
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
L+ M + LD L+ R RYT+ HP+D D+L+ RD P +
Sbjct: 249 SLARLMEHMAR-----------LDGLA------RLRYTTSHPRDMDDDLIAAHRDLPQLM 291
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
Y+HLP Q+G+ +L M R + R+ + +++K+RQ PD+ LSSDFI GF GE+E++
Sbjct: 292 PYLHLPVQSGSDRILAAMNRKHGRDDFFAIIEKMRQARPDMALSSDFIVGFPGESEKDFE 351
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
DTL L++ VG+ AY F YS R T A ++ VPEEVK RL EL S +
Sbjct: 352 DTLDLVRRVGFASAYSFKYSPRPGTPAA-DHDAQVPEEVKAERLAELQRLLEASKAAFDE 410
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKS 516
S G +L+E P ++A +L+G+S
Sbjct: 411 SCRGRTFDILLEKPGRQA--GQLIGRS 435
>gi|380511528|ref|ZP_09854935.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
sacchari NCPPB 4393]
Length = 474
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 240/450 (53%), Gaps = 34/450 (7%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ + E+ + PE A+V+ +NTC+IR+ A+ KV+
Sbjct: 22 RGKLYIKTHGCQMNEYDSAKMADVLAASEGLELTDNPEEADVVLVNTCSIREKAQEKVFS 81
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L WK A G+ P I V GC+A + + I+ VD+V GP
Sbjct: 82 QLG-------RWKALKAGGK-----PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 129
Query: 196 DLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L+ + G+ ++ E + + R S AFVS+M GC+ CSFC+VP
Sbjct: 130 RLPELIRARRESGKSQVDISFPEVEKFDRLPEPRAEGPS--AFVSIMEGCSKYCSFCVVP 187
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y + E + L
Sbjct: 188 YTRGEEISRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGPYADAEAGEETQHADLGLL 247
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
S+ +++ +G R R+T+ HP +F D L+ RD P + Y+HL
Sbjct: 248 IRSIAQIEGIG-----------------RIRFTTSHPLEFSDSLVEAYRDVPQLANYLHL 290
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GE++ + T+ L
Sbjct: 291 PVQAGSDRILSAMKRGYTALEFKQKIRKLRAVRPDISISSDFIVGFPGESDADFDKTMKL 350
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG+D ++ F YS R T A + DD PE VK RL L +G+
Sbjct: 351 IEDVGFDQSFSFIYSRRPGTPAA-DLEDDTPEAVKHARLARLQAHINAHAQTISQGMIGS 409
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLVEGP+KK P EL GK++ V F
Sbjct: 410 VQTVLVEGPSKKNP-AELTGKTENMRSVNF 438
>gi|89100706|ref|ZP_01173562.1| YmcB [Bacillus sp. NRRL B-14911]
gi|89084581|gb|EAR63726.1| YmcB [Bacillus sp. NRRL B-14911]
Length = 514
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 256/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y T+GCQMN +D E++ I + GY E + E+A VI +NTCAIR+ AE+KV+ L
Sbjct: 70 KFYIRTFGCQMNEHDTEVMAGIFLSLGY-EPTDTVEDANVILLNTCAIRENAENKVFGEL 128
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK+E + ++ G V GCM+ E + +KIL VD++ G
Sbjct: 129 GHLKHLKKE-RPDLLLG-----------VCGCMSQEESVVNKILKTYDQVDMIFGTHNIH 176
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L+E ++ + + S E + P ++ K ++ A+V++M GC+ C++CIVP+
Sbjct: 177 RLPNILQEAYMSKEMVVEVWSKEGDVIENLP-KVRKGNIKAWVNIMYGCDKFCTYCIVPY 235
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV +L +G +E+TLLGQNVN+Y + F
Sbjct: 236 TRGKERSRRPEEIIQEVRQLAAQGYQEITLLGQNVNAY------------------GKDF 277
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + GL DL+D + ++ P R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 278 TDL----QYGL--GDLMDEIRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLEHIHL 329
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ VL+ M R YTRE YL+LV+KIR IP+ ++D I G+ ET+E+ +TL+L
Sbjct: 330 PVQSGSTDVLKIMARKYTREQYLELVRKIRAAIPNATFTTDIIVGYPNETDEQFEETLSL 389
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
K VGY+ AY F YS RE T A + D+VP EVK+ RL L E + + G
Sbjct: 390 YKEVGYESAYTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNEMSAEAMKKYHGQ 448
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K P+ L G + + V F
Sbjct: 449 TVEVLVEGESKNNPEV-LAGYTRKNKLVNF 477
>gi|313669088|ref|YP_004049372.1| hypothetical protein NLA_18110 [Neisseria lactamica 020-06]
gi|313006550|emb|CBN88014.1| conserved hypothetical protein [Neisseria lactamica 020-06]
Length = 442
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/438 (38%), Positives = 247/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + P++A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQPDDADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIAGLAQQGVKEINLLGQNVNAYRG------EMENG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDAIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+ I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLCAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
VGTVQ LVEG +KK PD
Sbjct: 381 VGTVQRCLVEGISKKDPD 398
>gi|159043568|ref|YP_001532362.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Dinoroseobacter shibae DFL 12]
gi|229890517|sp|A8LSE7.1|MIAB_DINSH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|157911328|gb|ABV92761.1| RNA modification enzyme [Dinoroseobacter shibae DFL 12]
Length = 437
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 237/446 (53%), Gaps = 47/446 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +TYGCQMNV D E + M GY + + E+A++I +NTC IR+ A KV+ L
Sbjct: 6 KLYIKTYGCQMNVYDSERMAEAMGGEGYVQT-DRAEDADMILLNTCHIREKAAEKVYSEL 64
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F LK E K KI V GC+A+ +I+ +VD+V GP AY L
Sbjct: 65 GRFKPLKAE------------KPDLKIGVAGCVAQAEGAEIMRRQPLVDLVVGPQAYHRL 112
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L G K ++T E+ + ++ +K TAF++V GC+ C+FC+VP+TR
Sbjct: 113 PELTARAATGAKALDTDFPEEDKFDHLAARPKAKRGPTAFLTVQEGCDKFCAFCVVPYTR 172
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTS-GMEKEVEPGANWRLSEGFN 316
G E SRP ++ E +L + GV+E+TLLGQNVN+Y+ + G+ G W L+E
Sbjct: 173 GAEVSRPAARVLTEARDLVERGVREITLLGQNVNAYHGHARGLA-----GLIWDLAE--- 224
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+D L R R+T+ HP D D L+ + Y+HLP
Sbjct: 225 ---------------IDGLE------RIRFTTSHPNDMDDALIAAHGACDKLMPYLHLPV 263
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +T E+Y+ L+++IR PD+ LS DFI GF GET+++ ADT+ L++
Sbjct: 264 QSGSDRILKAMNRKHTAESYIRLIERIRAARPDILLSGDFIVGFPGETDQDFADTMALVE 323
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
AVGY AY F YS R T A +DVP EV RL L D++VGT
Sbjct: 324 AVGYGQAYSFKYSARPGTPAAEK--EDVPGEVADARLQTLQALLTRQQRAIQDAKVGTTA 381
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRV 522
VL E P + ++VGKS+ H V
Sbjct: 382 RVLFEKPGRLP--GQMVGKSEHLHAV 405
>gi|21231765|ref|NP_637682.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66768109|ref|YP_242871.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
campestris pv. campestris str. 8004]
gi|188991239|ref|YP_001903249.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
campestris pv. campestris str. B100]
gi|81305914|sp|Q4UVS2.1|MIAB_XANC8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|81793688|sp|Q8P8B5.1|MIAB_XANCP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229891032|sp|B0RRW2.1|MIAB_XANCB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|21113472|gb|AAM41606.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573441|gb|AAY48851.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732999|emb|CAP51197.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 485
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 241/457 (52%), Gaps = 49/457 (10%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ + E+ + PE+A+V+ +NTC+IR+ A+ KV+
Sbjct: 36 RGKLYIKTHGCQMNEYDSAKMADVLAASEGLELTDNPEDADVVLVNTCSIREKAQEKVFS 95
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L WK A G+ P I V GC+A + + I+ VD+V GP
Sbjct: 96 QLG-------RWKALKAGGK-----PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 143
Query: 196 DLPRLL--------EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 247
LP L+ +VD I L E AD +AFVS+M GC+
Sbjct: 144 RLPELIRARRESGKSQVDISFPEIEKFDRLPEPRAD---------GPSAFVSIMEGCSKY 194
Query: 248 CSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGA 307
CSFC+VP+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y G + EP
Sbjct: 195 CSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAG-EPAQ 253
Query: 308 NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
L ++ ++ +G R R+T+ HP +F D L+ RD P
Sbjct: 254 YADLGLLIRTIAQIDGIG-----------------RIRFTTSHPLEFSDSLVDAYRDVPQ 296
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
+ Y+HLP Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GET+ +
Sbjct: 297 LANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDAD 356
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
T+ L++ VG+D ++ F YS R T A + DD P+ VKQ RL L
Sbjct: 357 FDKTMKLIEDVGFDQSFSFIYSRRPGTPAS-DLEDDTPDAVKQARLARLQAHINAHAAGI 415
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VG+VQ VLVEGP+++ + EL GK++ V F
Sbjct: 416 SQRMVGSVQRVLVEGPSRRDAN-ELTGKTENMRPVNF 451
>gi|418576319|ref|ZP_13140465.1| putative 2-methylthioadenine synthetase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|379325381|gb|EHY92513.1| putative 2-methylthioadenine synthetase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 513
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 173/458 (37%), Positives = 264/458 (57%), Gaps = 54/458 (11%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
QG+ + +TYGCQMN +D E++ I+ GY+ ++ +A+VI INTCAIR+ AE+KV
Sbjct: 64 GQGKTFLIKTYGCQMNAHDTEVMAGILGALGYTPTEDI-NHADVILINTCAIRENAENKV 122
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ + LK+E + V I V GCM+ E + +KIL + + VD++ G
Sbjct: 123 FSEIGNLKHLKKEKPETV------------IGVCGCMSQEESVVNKILKSYQNVDMIFGT 170
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP +LEE + + + S E + P ++ + ++ A+V++M GC+ C++C
Sbjct: 171 HNIHRLPEILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYC 229
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWR 310
IVPFTRG+ERSR E I+ EV +L ++G KE+TLLGQNVN+Y D G+
Sbjct: 230 IVPFTRGKERSRRPEDIIDEVRDLARQGYKEITLLGQNVNAYGKDIDGL----------- 278
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
DLL+ +S ++ P R R+T+ HP DF D ++ ++ + N+
Sbjct: 279 --------------AYGLGDLLEDISKIDIP--RVRFTTSHPWDFTDRMIEVIANGGNIV 322
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
++HLP Q+GN+AVL+ M R YTRE+YLDLV +I+ IP+V L++D I G+ ET+E+
Sbjct: 323 PHVHLPVQSGNNAVLKIMGRKYTRESYLDLVNRIKTHIPNVALTTDIIVGYPNETDEQFE 382
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL---IEAFRESTGQ 486
+TLTL V ++ AY + YS R+ T A + D+VP +VK+ RL +L + + E Q
Sbjct: 383 ETLTLYDEVEFEHAYTYIYSQRDGTPAAK-MNDNVPLDVKKDRLQQLNKKVAYYSERAMQ 441
Query: 487 CYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Y+ Q TVQ VL EG +KK DT L G + + V F
Sbjct: 442 QYEGQ--TVQ-VLCEGVSKK-DDTVLSGYTSKNKLVNF 475
>gi|418317263|ref|ZP_12928687.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21340]
gi|365239635|gb|EHM80437.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
subsp. aureus 21340]
Length = 514
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 252/447 (56%), Gaps = 47/447 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ I++ GY ++ A+VI INTCAIR+ AE+KV+ +
Sbjct: 73 KTYGCQMNAHDTEVIAGILEALGYQATTDI-NTADVILINTCAIRENAENKVFSEIGNLK 131
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+E + ++ G V GCM+ E + +KIL + + VD++ G LP
Sbjct: 132 HLKKE-RPDILIG-----------VCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPE 179
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFTRG+
Sbjct: 180 ILEEAYLSKAMVVEVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFTRGK 238
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPGANWRLSEGFNSM 318
ERSR E I+ EV EL +EG KE+TLLGQNVNSY D +E +
Sbjct: 239 ERSRRPEDIIDEVRELAREGYKEITLLGQNVNSYGKDLQDIEYD---------------- 282
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
DLL +S + P R R+T+ HP DF D ++ ++ + N+ +IHLP Q
Sbjct: 283 ---------LGDLLQAISKIAIP--RVRFTTSHPWDFTDHMIDVISEGGNIVPHIHLPVQ 331
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+GN+AVL+ M R YTRE+YLDLV++I+ I +V L++D I G+ E+EE+ +TLTL
Sbjct: 332 SGNNAVLKIMGRKYTRESYLDLVKRIKDRIANVALTTDIIVGYPNESEEQFEETLTLYDE 391
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG++ AY + YS R+ T A + D+VP +VK+ RL L + + G
Sbjct: 392 VGFEHAYTYLYSQRDGTPAAK-MKDNVPLDVKKERLQRLNKKVGHYSQIAMSKYEGQTVT 450
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL EG +KK D L G +D+ V F
Sbjct: 451 VLCEGSSKK-DDQVLAGYTDKNKLVNF 476
>gi|114331766|ref|YP_747988.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Nitrosomonas
eutropha C91]
gi|122313484|sp|Q0AF59.1|MIAB_NITEC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|114308780|gb|ABI60023.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosomonas eutropha
C91]
Length = 443
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 244/449 (54%), Gaps = 42/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + I+ + E+ VPE A++I NTC++R+ A+ KV+ L
Sbjct: 4 KLYIKTFGCQMNEYDSAKMADILLSEKNMELTEVPEEADLILFNTCSVREKAQEKVFHDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK SK I V GC+A + +I+ VD+V GP L
Sbjct: 64 GRVRHLK------------NSKPDLLIGVGGCVASQEGSEIVRRAPFVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L++ GQ ++ E + + P R + TAFVS+M GC+ CSFC+VP+T
Sbjct: 112 PELIDARRRTGQSQVDITFPEIEKFDRLPPARTT--GATAFVSIMEGCSKYCSFCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GVKEVTLLGQNVN+Y D + E +++
Sbjct: 170 RGEEVSRPLDDVLTEVAGLVIQGVKEVTLLGQNVNAYYDKTSGEGDID------------ 217
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
FA LLD + E P + R RYT+ HP++F L+ + P + ++HLP
Sbjct: 218 -----------FATLLDYIH-EIPGLVRIRYTTSHPREFTARLIETYQRLPKLVGHVHLP 265
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+ +L M+RGYT Y +++K+R I P++ +SSDFI GF GET+ + +T+ L+
Sbjct: 266 IQSGSDRILAAMKRGYTIIEYKSIIRKLRTIRPNISISSDFIVGFPGETDTDFEETMKLI 325
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
V +D ++ F YS R T A + DD P +K RL +L E + + S V T+
Sbjct: 326 DDVKFDESFSFIYSPRPGTPAS-DLPDDTPYRIKLARLHQLQEKIQRNAQMISQSMVDTI 384
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEGP+KK P+ E G++D V F
Sbjct: 385 QRVLVEGPSKKDPN-EFCGRTDNNRVVNF 412
>gi|312143592|ref|YP_003995038.1| MiaB family RNA modification protein [Halanaerobium
hydrogeniformans]
gi|311904243|gb|ADQ14684.1| RNA modification enzyme, MiaB family [Halanaerobium
hydrogeniformans]
Length = 442
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 253/428 (59%), Gaps = 46/428 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + +++N GY+ N ENA+++ +NTC IR+ AE KV+ +L
Sbjct: 11 TYGCQMNEHDSEKLAGMLENIGYNNT-NKLENADIVLLNTCTIRENAELKVFGKLGQL-- 67
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
+E+K+ K+P I+ + GCM E ++I + VD++ G +P
Sbjct: 68 --KEYKR---------KNPDLIIGIGGCMMQLEEPVEEIYKKYRHVDLIFGTHNIHQVPE 116
Query: 200 LLEEVDYGQKGINTLLSLEE-TYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
L+++++ ++ + + EE D+ R S++S A++S+++GC+N C++CIVP+ RG
Sbjct: 117 LIKKIEKNRERVVEVWDQEEGLIPDLPSQRESEHS--AWISIIQGCDNFCTYCIVPYVRG 174
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERSRP+E+I+KE ++L EGVKEVTLLGQNVNSY + E
Sbjct: 175 RERSRPLEAIIKEAEKLAAEGVKEVTLLGQNVNSYGNDLAEE------------------ 216
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
+ F LL+ L+ R R+ + HP+DF ++LL +++ V K+IHLP Q+
Sbjct: 217 -------IDFPLLLEELNKVDSLARIRFMTSHPRDFSEKLLLAIKNLEKVAKHIHLPIQS 269
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ +L+ M RGY+RE Y+D V++I+ +P+ +S+DFI GF GE++E+ TL L+K +
Sbjct: 270 GSNKILKEMNRGYSREYYIDTVKEIQNKMPEAAISTDFIVGFPGESDEDFEQTLKLVKEL 329
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
+DMAY F YS R T A + D + EEVK+ RL +L++ + Q +G +Q +
Sbjct: 330 RFDMAYTFIYSPRSGTPAAKRE-DQIAEEVKKERLNKLMDIQNRISYQKNQKLIGKIQKI 388
Query: 499 LVEGPNKK 506
LV GP+ +
Sbjct: 389 LVTGPSNR 396
>gi|220920281|ref|YP_002495582.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Methylobacterium nodulans ORS 2060]
gi|219944887|gb|ACL55279.1| RNA modification enzyme, MiaB family [Methylobacterium nodulans ORS
2060]
Length = 447
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 239/440 (54%), Gaps = 40/440 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ + ++YGCQMNV D ++ ++ G++E V E A+V+ +NTC IR+ A KV+ L
Sbjct: 3 KAFVKSYGCQMNVYDAARMVDLLGREGFTET-AVIEEADVVVLNTCHIREKAAEKVYSEL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E R+++ IVV GC+A+ +I+ VDVV GP +Y L
Sbjct: 62 GRVRDLKGE--------RAEAGRETTIVVAGCVAQAEGREIIHRAPAVDVVVGPQSYHRL 113
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL +K ++T +++ + + P RI+ V++F++V GC+ C+FC+VP+TR
Sbjct: 114 PDLLRRA-RAEKVVDTEFPIDDKFDHLPPRRIA--GVSSFLTVQEGCDKFCAFCVVPYTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRPV ++ E + L G +E+TL+GQNVN+Y+ E GA W L
Sbjct: 171 GAEVSRPVAKVLAEAERLAAGGARELTLIGQNVNAYHG------EGPDGATWSLGR---- 220
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
LL RL+ E P + R RYT+ HP+D D+L+ RD P + Y+HLP
Sbjct: 221 -------------LLRRLA-EVPGIARLRYTTSHPRDMDDDLIAAHRDCPALMPYLHLPV 266
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ VL M R + E YL L+ +IR PD+ LSSDFI GF GET+ +HA T+ L+
Sbjct: 267 QSGSDRVLAAMNRKHDAETYLRLIDRIRTARPDIALSSDFIVGFPGETDADHAATMRLVA 326
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VG+ A+ F YS R T A + D VPE VK+ RL EL E + +G
Sbjct: 327 EVGFASAFSFKYSPRPGTPAAES-ADAVPEAVKRERLAELQALLEEQNRAFNRATIGRTV 385
Query: 497 LVLVEGPNKKAPDTELVGKS 516
VL E P + ++ GKS
Sbjct: 386 EVLFEKPGRHP--GQVAGKS 403
>gi|229891225|sp|A7IGB2.2|MIAB_XANP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
Length = 470
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 157/447 (35%), Positives = 241/447 (53%), Gaps = 41/447 (9%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
+H ++Y +++GCQMNV D + + G+ E + P A+++ +NTC IR+ A K
Sbjct: 1 MHEPRKLYVKSFGCQMNVYDSHRMADTLAREGFVETQD-PAEADLVILNTCHIREKAAEK 59
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
V+ L K+E + I V GC+A+ +I+ +VD+V GP
Sbjct: 60 VYSELGRLRKQKQEAGSDT-----------MIAVAGCVAQAEGAEIMRRAPVVDLVVGPQ 108
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADI-SPVRISKNS--VTAFVSVMRGCNNMCS 249
+Y LP LL E G++ ++T E+ + + +P R + S AFV+V GC+ C+
Sbjct: 109 SYHRLPELLAEAKAGKRVVDTEFPAEDKFDHLPAPTRAATRSRGPAAFVTVQEGCDKFCT 168
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
FC+VP+TRG E SRPV I+ E L +GV+E++L+GQNVN+++ G W
Sbjct: 169 FCVVPYTRGAEVSRPVAKIMDEAARLVDQGVREISLIGQNVNAFHGAG------PDGTTW 222
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
L+ M + LD L+ R RYT+ HP+D D+L+ RD P +
Sbjct: 223 SLARLMEHMAR-----------LDGLA------RLRYTTSHPRDMDDDLIAAHRDLPQLM 265
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
Y+HLP Q+G+ +L M R + R+ + +++K+RQ PD+ LSSDFI GF GE+E++
Sbjct: 266 PYLHLPVQSGSDRILAAMNRKHGRDDFFAIIEKMRQARPDMALSSDFIVGFPGESEKDFE 325
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
DTL L++ VG+ AY F YS R T A ++ VPEEVK RL EL S +
Sbjct: 326 DTLDLVRRVGFASAYSFKYSPRPGTPAA-DHDAQVPEEVKAERLAELQRLLEASKAAFDE 384
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKS 516
S G +L+E P ++A +L+G+S
Sbjct: 385 SCRGRTFDILLEKPGRQA--GQLIGRS 409
>gi|421563953|ref|ZP_16009765.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM2795]
gi|421906249|ref|ZP_16336151.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Neisseria
meningitidis alpha704]
gi|393292655|emb|CCI72069.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Neisseria
meningitidis alpha704]
gi|402339572|gb|EJU74786.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM2795]
Length = 442
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 162/436 (37%), Positives = 244/436 (55%), Gaps = 44/436 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L + LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGHVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDY-GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP+++ + + G ++ E + + P R+ + AFVS+M GC+ CSFC+VP
Sbjct: 110 RLPKMIVDKEISGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCVVP 167
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 168 YTRGEEFSRPLNDVLTEIAGLAQQGVKEINLLGQNVNAYRG------EMDDG-------- 213
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++H
Sbjct: 214 --EICD-------FATLL-RIVHEIPGIERLRFTTSHPREFTDAIIECYRDLPKLVSHLH 263
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL
Sbjct: 264 LPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLK 323
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L+K + +D++++F YS R T A N DD P E K RRL L E T + + +G
Sbjct: 324 LVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTMIG 382
Query: 494 TVQLVLVEGPNKKAPD 509
TVQ LVEG +KK PD
Sbjct: 383 TVQRCLVEGISKKDPD 398
>gi|15677701|ref|NP_274862.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
meningitidis MC58]
gi|304388407|ref|ZP_07370514.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
ATCC 13091]
gi|385853919|ref|YP_005900433.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
H44/76]
gi|416198803|ref|ZP_11619170.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
CU385]
gi|416214622|ref|ZP_11622986.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M01-240013]
gi|421555585|ref|ZP_16001512.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
98008]
gi|421561890|ref|ZP_16007727.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM2657]
gi|427826504|ref|ZP_18993554.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
H44/76]
gi|433465845|ref|ZP_20423315.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM422]
gi|433489040|ref|ZP_20446189.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M13255]
gi|433491218|ref|ZP_20448330.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM418]
gi|433505702|ref|ZP_20462633.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
9506]
gi|433507855|ref|ZP_20464751.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
9757]
gi|433509961|ref|ZP_20466818.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
12888]
gi|433512082|ref|ZP_20468896.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
4119]
gi|81784211|sp|Q9JXV8.1|MIAB_NEIMB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|7227123|gb|AAF42200.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|304337588|gb|EFM03750.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
ATCC 13091]
gi|316985478|gb|EFV64425.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
H44/76]
gi|325139525|gb|EGC62065.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
CU385]
gi|325143760|gb|EGC66077.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M01-240013]
gi|325200923|gb|ADY96378.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
H44/76]
gi|389606568|emb|CCA45481.1| bifunctional enzyme involved in thiolation and methylation of tRNA
[Neisseria meningitidis alpha522]
gi|402329045|gb|EJU64407.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
98008]
gi|402336275|gb|EJU71536.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM2657]
gi|432200542|gb|ELK56632.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM422]
gi|432221036|gb|ELK76851.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M13255]
gi|432225352|gb|ELK81095.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM418]
gi|432239065|gb|ELK94624.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
9757]
gi|432239187|gb|ELK94745.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
9506]
gi|432244899|gb|ELL00378.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
12888]
gi|432245239|gb|ELL00710.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
4119]
Length = 442
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
VGTVQ LVEG +KK PD
Sbjct: 381 VGTVQRCLVEGISKKDPD 398
>gi|421538835|ref|ZP_15985007.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
93003]
gi|421568362|ref|ZP_16014087.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM3001]
gi|402315542|gb|EJU51105.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
93003]
gi|402341532|gb|EJU76706.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM3001]
Length = 442
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
VGTVQ LVEG +KK PD
Sbjct: 381 VGTVQRCLVEGISKKDPD 398
>gi|399055630|ref|ZP_10743325.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Brevibacillus sp. CF112]
gi|398046839|gb|EJL39423.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Brevibacillus sp. CF112]
Length = 504
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 255/456 (55%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
E+ R + TYGCQMN +D E + I++ GY+ V E A+VI NTCAIR+ AE
Sbjct: 58 EIGKGKRYHVRTYGCQMNEHDSETIAGILQQMGYTSTDEV-EAADVILFNTCAIRENAED 116
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVC 189
KV+ L + LK N+ G V GCM+ E++ +KIL + + VD++
Sbjct: 117 KVFGELGHMKRLKNN-NPNLILG-----------VCGCMSQEEKVVNKILKSYQQVDLIF 164
Query: 190 GPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
G LP+L+ + + ++ + + S E + P ++ + + A+V++M GC+ C+
Sbjct: 165 GTHNIHRLPQLMRDAMFSKEMVIEVWSKEGDIVENMP-KLREGNTKAWVNIMYGCDKFCT 223
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
+CIVP+TRG+ERSR E ++ EV +L ++G KE+ LLGQNVN+Y ++E G
Sbjct: 224 YCIVPYTRGKERSRRPEDVIAEVRDLARQGFKEIMLLGQNVNAYGKDF---DDIEYG--- 277
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
F DLLD + ++ P R R+T+ HP+DF D L+ ++ N+
Sbjct: 278 ------------------FGDLLDEIRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNL 317
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+ IHLP Q+G++ +L+RM R YTRE YL+LV+KI+ IP+V LS+D I GF GET+E+
Sbjct: 318 VEQIHLPVQSGSTEILKRMARKYTREHYLELVRKIKAAIPNVSLSTDIIVGFPGETDEQF 377
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+T++L++ V YD AY F YS RE T A D+VP EVK+ RL L E +
Sbjct: 378 EETISLVEEVRYDSAYTFIYSPREGTPAAV-MEDNVPMEVKKARLYRLNEVLARIGLEQN 436
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VL+EG +K PD L G++ V F
Sbjct: 437 KKLQDQVLEVLIEGESKNNPDV-LAGRTRTNKLVHF 471
>gi|350570682|ref|ZP_08939030.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria wadsworthii
9715]
gi|349795146|gb|EGZ48950.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria wadsworthii
9715]
Length = 441
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/434 (37%), Positives = 243/434 (55%), Gaps = 41/434 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ T+GCQMN D E +LS++ E + + A++I NTC++R+ A+ KV+ L
Sbjct: 3 KVFIRTFGCQMNEYDSEKMLSVLAEGEDLEQTDNADEADIILFNTCSVREKAQEKVFSDL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E N+ G V GC+A + + I+ VDVV GP L
Sbjct: 63 GRVRPLK-EKNPNLIIG-----------VGGCVASQEGEAIVKRAPFVDVVFGPQTLHRL 110
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+++++ + G+ ++ E + + P R+ S AFVS+M GC+ CSFC+VP+T
Sbjct: 111 PQMIDDKKETGKSQVDISFPEIEKFDHLPPARVEGGS--AFVSIMEGCSKYCSFCVVPYT 168
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y G+ + E
Sbjct: 169 RGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYR---GLMDDGE------------ 213
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+C FA LL R+ E P + R R+T+ HP++F D ++ +D P + ++HLP
Sbjct: 214 -ICD-------FAMLL-RIVHEIPGIERMRFTTSHPREFSDRIIECYKDLPKLVSHLHLP 264
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL L+
Sbjct: 265 IQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLV 324
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
K + +D++++F YS R T A N D+ P E K RRL L E + T + + +GT+
Sbjct: 325 KDIAFDLSFVFIYSPRPGTPAA-NLPDETPHEEKVRRLEALNEVIEQETARINQTMLGTI 383
Query: 496 QLVLVEGPNKKAPD 509
Q LVEG +KK PD
Sbjct: 384 QRCLVEGVSKKDPD 397
>gi|418291273|ref|ZP_12903303.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM220]
gi|372200147|gb|EHP14272.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM220]
Length = 442
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFCI
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCI 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|317129126|ref|YP_004095408.1| tRNA-i(6)A37 thiotransferase protein MiaB [Bacillus
cellulosilyticus DSM 2522]
gi|315474074|gb|ADU30677.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cellulosilyticus
DSM 2522]
Length = 516
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/446 (37%), Positives = 246/446 (55%), Gaps = 47/446 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + I+ N G+ N ++A+VI +NTCAIR+ AE+KV+ + +
Sbjct: 79 TYGCQMNEHDSENMAGILLNMGFESTSN-SDDADVILLNTCAIRENAENKVFGEIGHLKT 137
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
+KRE P IV V GCM+ E + ++IL + VD++ G LP
Sbjct: 138 MKRE-------------RPELIVGVCGCMSQEESVVNRILQKHQHVDLIFGTHNIHRLPT 184
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL+ + ++ + + S E + P R K + +V++M GC+ C++CIVP+TRG+
Sbjct: 185 LLKNAIFNKEMVVEVWSKEGDIIENMP-RARKGQIQGWVNIMYGCDKFCTYCIVPYTRGK 243
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I++EV L + G KE+TLLGQNVN+Y
Sbjct: 244 ERSRRPEDIIEEVRHLARNGYKEITLLGQNVNAYGK------------------------ 279
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
+ M DL+D + ++ P R R+T+ HPKDF D L+ ++ N+ ++IHLP Q+
Sbjct: 280 DLVDMDYGLGDLMDEIRKIDIP--RVRFTTSHPKDFDDHLIEVLAKGGNLVEHIHLPVQS 337
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
GNS VL+ M R YTRE Y+ L +KI++ IP ++D I GF ET+ + DTL+L++ +
Sbjct: 338 GNSDVLKLMARKYTREEYVTLAKKIKEAIPHASFTTDIIVGFPNETDAQFEDTLSLVREM 397
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
YD AY + YS RE T A + D++P EVK+ RL L E + + S G V V
Sbjct: 398 EYDSAYTYVYSPREGTPAAK-MNDNIPMEVKKERLQRLNALVNEISAEKNKSYQGRVVEV 456
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +KK PD L G++ V F
Sbjct: 457 LVEGESKKNPDI-LAGRTRTNRLVNF 481
>gi|251797360|ref|YP_003012091.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
sp. JDR-2]
gi|247544986|gb|ACT02005.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp. JDR-2]
Length = 525
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 256/446 (57%), Gaps = 47/446 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+G+ Y +TYGCQMN +D E++ + + GY+ + + A+VI +NTCAIR+ AE KV
Sbjct: 79 GKGKFYLIQTYGCQMNEHDTEVMKGMFEEMGYTGTDDRLQ-ADVILLNTCAIRENAEDKV 137
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ L + LK + K + G V GCM+ E + KIL VD++ G
Sbjct: 138 FGELGHLKTLKLQ-KPELLLG-----------VCGCMSQEESVVGKILQKHAFVDMIFGT 185
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP LL+ + ++ + + S E + P + ++ + A+V++M GC+ C++C
Sbjct: 186 HNIHRLPHLLQNAYFSKEMVVEVWSKEGDIIENMPKK--RDGMRAWVNIMYGCDKFCTYC 243
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVP+TRG+ERSR E ++ EV EL ++G KE+TLLGQNVN+Y K+ E
Sbjct: 244 IVPYTRGKERSRRPEDVIAEVRELARQGFKEITLLGQNVNAYG------KDFE------- 290
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ RF DL+ +S ++ P R R+T+ HP+DF D L+ ++ N+ +
Sbjct: 291 -----------DISYRFGDLMHDISKIDIP--RIRFTTSHPRDFDDHLIEVLAQGGNLVE 337
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+G++ VL+RM R Y+RE +L KI++ IP+V LS+D I GF GET+E+ D
Sbjct: 338 HIHLPIQSGSTEVLKRMSRKYSREQIFELAAKIKRAIPNVSLSTDIIVGFPGETDEQFED 397
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
T+TL++ +G+D AY F YS RE T A D+VP E+K++RL L E E + +
Sbjct: 398 TMTLVRQIGFDFAYTFIYSPREGTPA-AGMEDNVPMELKKKRLKRLNELMAELGRRGNER 456
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKS 516
G + VLVEG +K P+ L G++
Sbjct: 457 MEGEIVEVLVEGESKNNPNI-LAGRT 481
>gi|433546738|ref|ZP_20503042.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brevibacillus
agri BAB-2500]
gi|432181958|gb|ELK39555.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brevibacillus
agri BAB-2500]
Length = 503
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 255/456 (55%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
E+ R + TYGCQMN +D E + I++ GY+ V E A+VI NTCAIR+ AE
Sbjct: 57 EIGKGKRYHVRTYGCQMNEHDSETIAGILQQMGYTSTDEV-EAADVILFNTCAIRENAED 115
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVC 189
KV+ L + LK N+ G V GCM+ E++ +KIL + + VD++
Sbjct: 116 KVFGELGHMKRLKNN-NPNLILG-----------VCGCMSQEEKVVNKILKSYQQVDLIF 163
Query: 190 GPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
G LP+L+ + + ++ + + S E + P ++ + + A+V++M GC+ C+
Sbjct: 164 GTHNIHRLPQLMRDAMFSKEMVIEVWSKEGDIVENMP-KLREGNTKAWVNIMYGCDKFCT 222
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
+CIVP+TRG+ERSR E ++ EV +L ++G KE+ LLGQNVN+Y ++E G
Sbjct: 223 YCIVPYTRGKERSRRPEDVIAEVRDLARQGFKEIMLLGQNVNAYGKDF---DDIEYG--- 276
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
F DLLD + ++ P R R+T+ HP+DF D L+ ++ N+
Sbjct: 277 ------------------FGDLLDEIRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNL 316
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+ IHLP Q+G++ +L+RM R YTRE YL+LV+KI+ IP+V LS+D I GF GET+E+
Sbjct: 317 VEQIHLPVQSGSTEILKRMARKYTREHYLELVRKIKAAIPNVSLSTDIIVGFPGETDEQF 376
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+T++L++ V YD AY F YS RE T A D+VP EVK+ RL L E +
Sbjct: 377 EETISLVEEVRYDSAYTFIYSPREGTPAAV-MEDNVPMEVKKARLYRLNEVLARIGLEQN 435
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VL+EG +K PD L G++ V F
Sbjct: 436 KKLQDQVLEVLIEGESKNNPDV-LAGRTRTNKLVHF 470
>gi|412339409|ref|YP_006968164.1| hypothetical protein BN112_2102 [Bordetella bronchiseptica 253]
gi|408769243|emb|CCJ54019.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
Length = 475
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 251/467 (53%), Gaps = 43/467 (9%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
P+ + AT ++ G++Y T+GCQMN D + + +++ E+ + PE+A+VI
Sbjct: 12 GPSDAGTPATAAQ--GLGKLYIRTFGCQMNEYDSDKMADVLRADQGLELTDNPEDADVIL 69
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
NTC++R+ A+ KV+ L LK++ N+ G V GC+A + + I+
Sbjct: 70 FNTCSVREKAQEKVFSDLGRVQHLKKQ-NPNLVIG-----------VGGCVASQEGEAIV 117
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFV 238
VDVV GP LP L++ G ++ E + + P RI + TAFV
Sbjct: 118 KRAPYVDVVFGPQTLHRLPDLIKRRRAQGVSQVDISFPEIEKFDALPPPRI--DGATAFV 175
Query: 239 SVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG 298
S+M GC+ CSFC+VP+TRG E SRP + ++ EV +L +GVKEVTLLGQNVN+Y G
Sbjct: 176 SIMEGCSKYCSFCVVPYTRGEEVSRPFDDVLLEVADLADQGVKEVTLLGQNVNAYRGAMG 235
Query: 299 MEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDE 357
E+ FA LL+ + E P + R RYT+ HPK+
Sbjct: 236 DSGEIA----------------------DFAMLLEYVH-EIPGIERIRYTTSHPKEMTQR 272
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
++ P + ++HLP Q G+ VL M+RGYT + +V+++R P + LSSDFI
Sbjct: 273 MVDAYARLPKLVSFLHLPVQAGSDRVLAAMKRGYTALEFKSVVRRLRAARPSLTLSSDFI 332
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GF GETEE+ T+ L++ VG+D ++ F YS R T A + DD P++VK RRL +L
Sbjct: 333 VGFPGETEEDFQKTMKLIEDVGFDTSFSFVYSRRPGTPAA-DLHDDTPQDVKLRRLQQLQ 391
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +GT Q VLVEGP+++ P+ EL+G+++ V F
Sbjct: 392 ALINQQAAAIAQGMIGTRQRVLVEGPSRRDPN-ELMGRTENNRIVNF 437
>gi|39997296|ref|NP_953247.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter
sulfurreducens PCA]
gi|409912640|ref|YP_006891105.1| tRNA (2-methylthio-N6-dimethylallyl-A37) methylthiotransferase
[Geobacter sulfurreducens KN400]
gi|81701892|sp|Q74B44.1|MIAB_GEOSL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|39984186|gb|AAR35574.1| tRNA (2-methylthio-N6-dimethylallyl-A37) methylthiotransferase
[Geobacter sulfurreducens PCA]
gi|298506234|gb|ADI84957.1| tRNA (2-methylthio-N6-dimethylallyl-A37) methylthiotransferase
[Geobacter sulfurreducens KN400]
Length = 446
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 243/444 (54%), Gaps = 42/444 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y ET+GCQMNVND E + +++K+ GY + PE A+++ +NTC++R AE KV+ L
Sbjct: 7 LYVETFGCQMNVNDSEKIATLLKDEGYLPTDD-PERADLVILNTCSVRAKAEQKVYGHLG 65
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
F + R KK G V GC+A++ +++L +D+V G LP
Sbjct: 66 RFKGV-RSRKKGFLLG-----------VGGCVAQQEGERLLQKVPWLDLVFGTHNLHLLP 113
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
++ + G++ ET D+ P + VT FV+VM+GC+N CS+CIVP+ RG
Sbjct: 114 EIVRAAERGERRAEVGFIDNETRLDLFPETGGEGGVTRFVTVMQGCDNFCSYCIVPYVRG 173
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE SR I+ EV + EGVKEVTLLGQNVNSY G++ E E
Sbjct: 174 REISRRSSDIIDEVRKSVAEGVKEVTLLGQNVNSY----GLKTEGE-------------- 215
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
L FA L+ R++ R R+T+ HPKD EL+ + P +C +IHLPAQ+
Sbjct: 216 -------LSFAGLIRRIAEVEGLERIRFTTSHPKDISPELIACFAEVPKLCGHIHLPAQS 268
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G+ AVL RM RGYTR YL+ V+ +R P + + D I GF GETEE+ T++LM+ V
Sbjct: 269 GSDAVLARMNRGYTRAGYLEKVEALRAARPGIQFTGDMIVGFPGETEEDFQATISLMEEV 328
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
Y + F YS R T A D V + KQ RL L ++ + S VGT QLV
Sbjct: 329 RYADLFSFIYSPRPETAAA-GIRDTVSRKEKQSRLDRLQTLQQQMKRERNISFVGTRQLV 387
Query: 499 LVEGPNKKAPDTELVGKSDRGHRV 522
LVEG +K+ +L G+ D G+R+
Sbjct: 388 LVEGVSKRGD--QLYGRID-GNRI 408
>gi|416184810|ref|ZP_11613127.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M13399]
gi|325133510|gb|EGC56173.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M13399]
Length = 442
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/438 (37%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
VGTVQ LVEG +KK PD
Sbjct: 381 VGTVQRCLVEGISKKDPD 398
>gi|302389750|ref|YP_003825571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermosediminibacter
oceani DSM 16646]
gi|302200378|gb|ADL07948.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermosediminibacter
oceani DSM 16646]
Length = 439
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 246/444 (55%), Gaps = 43/444 (9%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMN++D E++ +++ GY N+ E A++I +NTC +R+ AE KV+ R+
Sbjct: 8 TWGCQMNLHDTEVISGVLQKMGYCPAGNLKE-ADLIILNTCCVRENAERKVYGRIGQLKQ 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAER--LKDKILDADKMVDVVCGPDAYRDLPRL 200
K+ N+ G + GCM ++ + + I + VD++ G LP+L
Sbjct: 67 FKQR-NPNLVLG-----------ICGCMIQQPHVVEYITEHFPYVDLIFGIHNVHKLPQL 114
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
+E + + PV ++ + A+V++ GCNN C++CIVP+ RGRE
Sbjct: 115 IENARLANMTVIETGGESSQIEEDLPVE-REDKIKAWVTITYGCNNFCTYCIVPYVRGRE 173
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
+SR E IV+EV+EL K+G KE+ LLGQNVNSY G GA
Sbjct: 174 KSRNPEDIVREVEELAKQGFKEINLLGQNVNSYGKDLG-------GA------------- 213
Query: 321 VKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGN 380
+ F +LL RL+ R R+T+ HPKD DEL+Y MRD VC++IHLP Q G+
Sbjct: 214 -----VTFPELLRRLNDIDGIERIRFTTSHPKDLSDELIYAMRDCKKVCEHIHLPVQAGS 268
Query: 381 SAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGY 440
+ +LE M R YTRE Y++LV+K+R I D+ +S+D I GF GETEE+ DTL L++ V Y
Sbjct: 269 NRILEAMNRRYTREHYMELVKKLRDAISDIAISTDIIVGFPGETEEDFQDTLDLVRRVEY 328
Query: 441 DMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLV 500
D A+MF YS R+ T A + V E+VK+ RL L+ + + + G V VLV
Sbjct: 329 DQAFMFVYSKRKGTPAAE-MENQVDEDVKKERLDRLMRLQDSISAKKNKALKGQVVEVLV 387
Query: 501 EGPNKKAPDTELVGKSDRGHRVAF 524
EGP++ P+ +L G++ V F
Sbjct: 388 EGPSRNNPE-KLTGRTRTNKVVNF 410
>gi|89053188|ref|YP_508639.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Jannaschia sp.
CCS1]
gi|122999629|sp|Q28UJ8.1|MIAB_JANSC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|88862737|gb|ABD53614.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Jannaschia sp. CCS1]
Length = 462
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 242/467 (51%), Gaps = 41/467 (8%)
Query: 56 LADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENA 115
+A P+ E+S +++ +TYGCQMNV D E + + GY E +N PE A
Sbjct: 7 VAGYTPSVEISLTPREAPQMTKKLFVKTYGCQMNVYDSERMAEALGGEGY-EQVNTPEGA 65
Query: 116 EVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLK 175
++I +NTC IR+ A K++ L L R+ ++ KI V GC+A+
Sbjct: 66 DMILLNTCHIREKAAEKMYSELGRLRPL-RDANPDL-----------KIGVAGCVAQAEG 113
Query: 176 DKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVT 235
++I+ +VD+V GP Y LP+++E V+ G+K ++T E+ + ++ R ++ T
Sbjct: 114 EEIMRRQPLVDLVVGPQTYHRLPKMMEAVNAGEKALDTDFPEEDKFLNLPKARATRGP-T 172
Query: 236 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYND 295
AF++V GC+ C+FC+VP+TRG E SR E ++ E +L GV+E+TLLGQNVN+Y+
Sbjct: 173 AFLTVQEGCDKFCAFCVVPYTRGAEVSRSAERLMAEARDLVDRGVREITLLGQNVNAYHG 232
Query: 296 TSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFP 355
G W L+ M K+ D LDR+ R+T+ HP D
Sbjct: 233 AGD-------GGTWGLARLIREMAKI--------DGLDRI---------RFTTSHPNDME 268
Query: 356 DELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSD 415
D+L+ D P + Y+HLP Q G+ +L+ M R +T Y+ L+ +IR PD+ LS D
Sbjct: 269 DDLIAAHGDCPELMPYLHLPVQAGSDKILKAMNRKHTAADYIRLIDRIRDARPDLHLSGD 328
Query: 416 FICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTE 475
FI GF GETEE+ TL L++ VGY AY F YS R T A V E RL
Sbjct: 329 FIVGFPGETEEDFQATLDLVETVGYGTAYSFKYSARPGTPAAER-TGQVSEAEASDRLQR 387
Query: 476 LIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
L + D+ VG VL E P + +++GKS+ H V
Sbjct: 388 LQALLTQQQRAAQDAMVGRRVKVLFEKPGRNP--GQMIGKSEYLHSV 432
>gi|424873377|ref|ZP_18297039.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393169078|gb|EJC69125.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 473
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 252/462 (54%), Gaps = 43/462 (9%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
APA+ + S + + + +++ +TYGCQMNV D + + GY ++ E A+++
Sbjct: 10 APAA-IPSESLRDGSNSRKVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDM-EEADLVL 67
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
+NTC IR+ A KV+ L +K KK A GR I V GC+A+ ++IL
Sbjct: 68 LNTCHIREKAAEKVYSALGRLREMK---KKKAADGREM-----MIGVAGCVAQAEGEEIL 119
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSVT 235
VDVV GP Y LP L GQ+ ++T ++E+ + + P+ RI VT
Sbjct: 120 RRAPAVDVVIGPQTYHRLPEALRRAKQGQRVVDTEYAIEDKFEHL-PIAESRRIRARGVT 178
Query: 236 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYND 295
AF++V GC+ C+FC+VP+TRG E SRPV IV+E ++L + GV+E+TLLGQNVN+++
Sbjct: 179 AFLTVQEGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAEKLVESGVREITLLGQNVNAWHG 238
Query: 296 TSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDF 354
G W L DLL RL+ E P + R RYT+ HP+D
Sbjct: 239 AGSQ------GEAWSL-----------------GDLLYRLA-EIPGLARLRYTTSHPRDM 274
Query: 355 PDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSS 414
D L+ RD + Y+HLP Q+G+ +L+ M R +T YL L+++IR + PD+ LS
Sbjct: 275 DDRLINAHRDLSALMPYLHLPVQSGSDRILKAMNRRHTAAEYLALIERIRTVRPDIALSG 334
Query: 415 DFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLT 474
DFI GF GET+E+ DTL L++ V Y A+ F YS R T D VPEE+K RL
Sbjct: 335 DFITGFPGETDEDFEDTLRLVEGVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLE 393
Query: 475 ELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
L + + +S +G +L+E P + P+ +L+G+S
Sbjct: 394 RLQMLLLKQQQEFAESCIGKEIDLLLEKPG-RMPE-QLIGRS 433
>gi|425736888|ref|ZP_18855164.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
massiliensis S46]
gi|425483360|gb|EKU50512.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Staphylococcus
massiliensis S46]
Length = 512
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 257/452 (56%), Gaps = 51/452 (11%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+ +TYGCQMN +D E++ I GY+ ++ +A+VI +NTCAIR+ AE+KV+ +
Sbjct: 69 FFIKTYGCQMNAHDTEVMAGIFGALGYTPSTDI-NSADVILLNTCAIRENAENKVFSEIG 127
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRD 196
LK+E + I V GCM+ E + +KIL + + VD++ G
Sbjct: 128 NLKHLKKERPDCL------------IGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHK 175
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP +LEE + + + S E + P ++ + ++ A+V++M GC+ C++CIVPFT
Sbjct: 176 LPEILEEAYMSKAMVVDVWSKEGDVIENLP-KVREGNIKAWVNIMYGCDKFCTYCIVPFT 234
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG+ERSR + I+ EV +L ++G +E+TLLGQNVNSY K++E G
Sbjct: 235 RGKERSRRPQDIIDEVRDLARQGYQEITLLGQNVNSYGKDL---KDIEYG---------- 281
Query: 317 SMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
DL + +S ++ P R R+T+ HP DF D ++ ++ N+ +IHLP
Sbjct: 282 -----------LGDLFEDISKIDIP--RVRFTTSHPWDFTDHMIDVIAKGGNIVPHIHLP 328
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+GN AVL+ M R YTRE+YLDLV++I+ IPDV L++D I G+ ETEE+ DTLTL
Sbjct: 329 VQSGNDAVLKIMGRKYTRESYLDLVERIKAKIPDVALTTDIIVGYPNETEEQFQDTLTLY 388
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC---YDSQV 492
VG++ AY + YS R+ T A + D+VP VK+ RL L + E + YD++V
Sbjct: 389 DEVGFEHAYTYIYSQRDGTPAAK-MKDNVPTRVKKERLQTLNKKVGEYCQEALKRYDNEV 447
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
T VL EG +KK D L G +D+ V F
Sbjct: 448 VT---VLCEGTSKK-DDEVLAGYTDKNKLVNF 475
>gi|19703810|ref|NP_603372.1| MIAB protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|81484620|sp|Q8RG43.1|MIAB_FUSNN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|19713958|gb|AAL94671.1| MIAB protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 435
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 245/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY +V +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DVTEEIDNADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVEGDYIVRFVSPHPRDFTDDVIEVIAKNKKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L++MRRGYT+E YL LV KI+ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILKKMRRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL L+E + + G +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIEESVKKERLQRLMEVQNKCSFYESSKYKGRIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 381 KVLVEGPSKKNKEV-LSGRTSTNKIVLF 407
>gi|254804310|ref|YP_003082531.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
meningitidis alpha14]
gi|416179646|ref|ZP_11611082.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M6190]
gi|416190180|ref|ZP_11615660.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
ES14902]
gi|418289012|ref|ZP_12901410.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM233]
gi|433493282|ref|ZP_20450367.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM586]
gi|433503613|ref|ZP_20460568.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM126]
gi|254667852|emb|CBA03889.1| putative 2-methylthioadenine synthetase [Neisseria meningitidis
alpha14]
gi|325131508|gb|EGC54215.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M6190]
gi|325139238|gb|EGC61784.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
ES14902]
gi|372200496|gb|EHP14564.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM233]
gi|432226523|gb|ELK82250.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM586]
gi|432238815|gb|ELK94378.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM126]
Length = 442
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|385341289|ref|YP_005895160.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M01-240149]
gi|385856586|ref|YP_005903098.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NZ-05/33]
gi|325201495|gb|ADY96949.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M01-240149]
gi|325207475|gb|ADZ02927.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NZ-05/33]
Length = 442
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|168702635|ref|ZP_02734912.1| probable MiaB protein-putative tRNA-thiotransferase [Gemmata
obscuriglobus UQM 2246]
Length = 492
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 250/467 (53%), Gaps = 58/467 (12%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ET GCQMNV D E+V+ ++ GY ++ + P A+V+ NTC++R++AE K + L
Sbjct: 4 KVYIETVGCQMNVLDSELVIGALRKRGY-DLTDDPAAADVLLFNTCSVREHAEDKTYSAL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+KR+ V I VLGCMA++ +D I VD+V G +
Sbjct: 63 GRVRLVKRDKPGAV------------IGVLGCMAQKDQDAIRKRAPYVDMVVGTGQLGAV 110
Query: 198 PRLLEEVDYGQKGINTLLSL----------EETYADISPVR---ISKNSVTAFVSVMRGC 244
P L+++V + +SL E ++ P R + A+V + GC
Sbjct: 111 PDLVDKV-RATREPQLAVSLGRADGGRNEVEASFVSYDPARDPSMRPTPFQAYVRIQIGC 169
Query: 245 NNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVE 304
+ C++C+VP TRG E+SRP E I EV +L +G KEVTLLGQ VNSY SG
Sbjct: 170 DKFCTYCVVPSTRGPEQSRPPEHIWNEVRQLVDQGCKEVTLLGQTVNSYVYESG------ 223
Query: 305 PGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRD 364
RLS+ A + D LE R ++ + +PKD D+LL +RD
Sbjct: 224 -DTRTRLSD-------------LIAGMHDVAGLE----RIKFVTNYPKDMTDDLLDAVRD 265
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
P V KY+H+P Q+G VL+RM+R YT Y++++ + R+++P V +SSDFI GFCGET
Sbjct: 266 LPKVVKYLHVPVQSGCDEVLKRMKRSYTAAYYMEMLARCRELVPGVSVSSDFIVGFCGET 325
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
EE ++ L++ + +++F YS R T A Y DDVPEEVK+RR +L+ E++
Sbjct: 326 EESFQKSMELVREARFKNSFIFKYSERGGTKAAERYPDDVPEEVKKRRNNDLLAVQNENS 385
Query: 485 GQCYDSQVGTVQLVLVEGPNK-------KAPDTELVGKSDRGHRVAF 524
+ +QVG V VLVEGP++ + +L G+S H V F
Sbjct: 386 RLDHRAQVGRVVEVLVEGPSRREQSNRERGATMQLTGRSMADHIVVF 432
>gi|421566272|ref|ZP_16012028.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM3081]
gi|402340881|gb|EJU76072.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM3081]
Length = 442
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|403383262|ref|ZP_10925319.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Kurthia sp.
JC30]
Length = 505
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 255/446 (57%), Gaps = 48/446 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMNV+D E++ I ++ GY +V E A VI +NTCAIR+ AE++V+ L +
Sbjct: 68 TFGCQMNVHDTEVMAGIFESLGYEATEDVNE-ANVILLNTCAIRENAENRVFGELGHLKP 126
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK +K+P ++ V GCM+ E + +KIL VD++ G LP
Sbjct: 127 LK-------------TKNPDLLLGVCGCMSQEEAVVNKILKTYDQVDIIFGTHNIHKLPD 173
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+L E ++ + + S E + P ++ A+V++M GC+ C++CIVP+TRG+
Sbjct: 174 ILHEAYMSKEMVVDVWSKEGDVIENMP-KVRNGGTKAWVNIMYGCDKFCTYCIVPYTRGK 232
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR + I++EV EL +G +E+TLLGQNVN+Y G + + G
Sbjct: 233 ERSRLPQDIIQEVRELAAQGYQEITLLGQNVNAY------------GKDLDMDYGL---- 276
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
L+D L ++ P R R+T+ HP+DF D L+ ++ + N+ ++IHLP Q+
Sbjct: 277 ---------GHLMDELRKIDVP--RIRFTTSHPRDFDDYLIEVLAKKGNLVEHIHLPVQS 325
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G+S++L+ M R YTRE YL+LV KI++ IPDV L++D I GF ETEE+ +TL+L + V
Sbjct: 326 GSSSMLKIMARKYTRERYLELVAKIKKAIPDVALTTDIIVGFPNETEEQFEETLSLYREV 385
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
G++MA+ + YS RE T A + D+VP +VK+ RL L E + + + G + V
Sbjct: 386 GFEMAFTYIYSPREGTPAAK-MQDNVPMDVKKDRLQRLNAVVSEYSAKSLEGYEGKIVEV 444
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LV+G +K+ D L G + R V F
Sbjct: 445 LVDGESKRNKDV-LAGYTRRNKLVNF 469
>gi|150390308|ref|YP_001320357.1| tRNA-i(6)A37 thiotransferase protein MiaB [Alkaliphilus
metalliredigens QYMF]
gi|229890435|sp|A6TR80.1|MIAB_ALKMQ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|149950170|gb|ABR48698.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus
metalliredigens QYMF]
Length = 476
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/447 (37%), Positives = 245/447 (54%), Gaps = 49/447 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + I++N GY E N A +I NTC +R+ AE KV+ +
Sbjct: 45 TYGCQMNEHDSEKLAGILQNIGYIET-NDKNEANLIIYNTCCVRENAELKVYGNIGSLKN 103
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAER--LKDKILDADKMVDVVCGPDAYRDLPRL 200
LK+E KH I V GCM ++ + +I + VD+V G P L
Sbjct: 104 LKKE------------KHDLTIAVCGCMMQQPHVVKEIKSKYRHVDLVFGTHNLHKFPEL 151
Query: 201 LEEVDYGQKGINTLLSLEETYADIS---PVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
L + N ++ + + DI PV K + AF+++M GCNN C++CIVP TR
Sbjct: 152 L---STSMESDNMIIDVWDKEGDIVEGLPV-TRKYGLKAFINIMFGCNNFCTYCIVPHTR 207
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR V+ I+ EV+EL K G KE+TLLGQNVNSY T +E+E +
Sbjct: 208 GRERSREVQEIIDEVEELAKNGTKEITLLGQNVNSYGKT--LEEETD------------- 252
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
F +LL L+ R R+ + HPKD D L+ M VC ++HLP Q
Sbjct: 253 ----------FGNLLKVLNKIEGIERIRFMTSHPKDLSDSLISAMTVCTKVCAHLHLPFQ 302
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
G++ +L+ M R YT+EAYL+LV+K+R +P+V L++D I GF GETE++ +TL +++
Sbjct: 303 AGSNDILKAMNRKYTKEAYLELVEKVRSKVPNVALTTDIIVGFPGETEDDFKETLNVVEK 362
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
++ AY + YS+R+ T A + + VP++VK R LIEA +G+ + + V
Sbjct: 363 ARFNSAYTYLYSLRQETPAAK-MENHVPDDVKHERFNRLIEAVNRISGEINKAYLNKVVE 421
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG + K D +L+G++ + V F
Sbjct: 422 VLVEGTS-KTDDAKLMGRTPQSKLVNF 447
>gi|293607161|ref|ZP_06689503.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Achromobacter piechaudii
ATCC 43553]
gi|292814495|gb|EFF73634.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Achromobacter piechaudii
ATCC 43553]
Length = 484
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 253/468 (54%), Gaps = 44/468 (9%)
Query: 60 APASEVSSA-TGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVI 118
APA ++S+ GS+ S ++Y T+GCQMN D + + +++ E+ + PE A+VI
Sbjct: 20 APALDISAPQAGSD--SPRKLYIRTFGCQMNEYDSDKMADVLRGDQGLELTDNPEEADVI 77
Query: 119 FINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKI 178
NTC++R+ A+ KV+ L LK+ N+ G V GC+A + I
Sbjct: 78 LFNTCSVREKAQEKVFSDLGRVQHLKK-TNPNLVIG-----------VGGCVASQEGAAI 125
Query: 179 LDADKMVDVVCGPDAYRDLPRLLEEVDY-GQKGINTLLSLEETYADISPVRISKNSVTAF 237
+ VDVV GP LP L+ G+ ++ E + ++ P R+ TAF
Sbjct: 126 VKRAPYVDVVFGPQTLHRLPDLIARRRAEGRSQVDISFPEIEKFDNMPPPRV--EGATAF 183
Query: 238 VSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTS 297
VS+M GC+ CSFC+VP+TRG E SRP E ++ EV +L +GVKEVTLLGQNVN+Y
Sbjct: 184 VSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLVEVADLADQGVKEVTLLGQNVNAYRGKM 243
Query: 298 GMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPD 356
EG + + FA LL+ + E P + R RYT+ HPK+
Sbjct: 244 ---------------EGTDEIAD-------FAMLLEYVH-EIPGIERIRYTTSHPKEMTQ 280
Query: 357 ELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDF 416
++ P + ++HLP Q G+ VL M+RGYT + +V+++R PD+ LSSDF
Sbjct: 281 RMVDAYARLPKLVSFLHLPVQAGSDRVLAGMKRGYTTLEFKSVVRRLRAARPDLTLSSDF 340
Query: 417 ICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
I GF GETEE+ T+ L++ VG+D ++ F YS R T A + DD P++VK RRL L
Sbjct: 341 IVGFPGETEEDFEKTMKLIEDVGFDTSFSFVYSRRPGTPAA-DLTDDTPQDVKLRRLQRL 399
Query: 477 IEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
E + VGT Q +LVEGP+++ P+ EL+G+++ V F
Sbjct: 400 QALINEQAATIARNMVGTRQRLLVEGPSRRDPN-ELMGRTENNRIVNF 446
>gi|121634220|ref|YP_974465.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
meningitidis FAM18]
gi|385324818|ref|YP_005879257.1| putative MiaB-like tRNA modification enzyme [Neisseria meningitidis
8013]
gi|385329113|ref|YP_005883416.1| hypothetical protein NMBB_2129 [Neisseria meningitidis alpha710]
gi|385855880|ref|YP_005902393.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M01-240355]
gi|421541164|ref|ZP_15987294.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
93004]
gi|421545185|ref|ZP_15991249.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM140]
gi|421547233|ref|ZP_15993271.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM183]
gi|421548205|ref|ZP_15994233.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM2781]
gi|421551008|ref|ZP_15997009.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
69166]
gi|421553438|ref|ZP_15999400.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM576]
gi|421559876|ref|ZP_16005743.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
92045]
gi|433469994|ref|ZP_20427401.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
98080]
gi|433472090|ref|ZP_20429468.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
68094]
gi|433474188|ref|ZP_20431542.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
97021]
gi|433478416|ref|ZP_20435725.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
70012]
gi|433482611|ref|ZP_20439866.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
2006087]
gi|433484618|ref|ZP_20441837.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
2002038]
gi|433486862|ref|ZP_20444051.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
97014]
gi|433495336|ref|ZP_20452397.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM762]
gi|433496059|ref|ZP_20453108.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M7089]
gi|433498024|ref|ZP_20455040.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M7124]
gi|433501524|ref|ZP_20458505.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM174]
gi|433522935|ref|ZP_20479613.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
61103]
gi|433526823|ref|ZP_20483445.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
69096]
gi|433537353|ref|ZP_20493849.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
77221]
gi|433539600|ref|ZP_20496067.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
70030]
gi|229890576|sp|A1KS33.1|MIAB_NEIMF RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|120865926|emb|CAM09663.1| hypothetical protein NMC0353 [Neisseria meningitidis FAM18]
gi|254672658|emb|CBA06484.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
gi|261393205|emb|CAX50824.1| putative MiaB-like tRNA modification enzyme [Neisseria meningitidis
8013]
gi|308389965|gb|ADO32285.1| hypothetical protein NMBB_2129 [Neisseria meningitidis alpha710]
gi|325204821|gb|ADZ00275.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M01-240355]
gi|402315957|gb|EJU51511.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
93004]
gi|402321262|gb|EJU56737.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM140]
gi|402321596|gb|EJU57069.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM183]
gi|402326927|gb|EJU62325.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM2781]
gi|402328115|gb|EJU63495.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM576]
gi|402329545|gb|EJU64906.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
69166]
gi|402334442|gb|EJU69730.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
92045]
gi|432201224|gb|ELK57307.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
98080]
gi|432206716|gb|ELK62717.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
68094]
gi|432207506|gb|ELK63495.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
97021]
gi|432213310|gb|ELK69232.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
70012]
gi|432214631|gb|ELK70528.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
2006087]
gi|432219704|gb|ELK75540.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
2002038]
gi|432220461|gb|ELK76281.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
97014]
gi|432227968|gb|ELK83670.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM762]
gi|432233365|gb|ELK88993.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM174]
gi|432236791|gb|ELK92395.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M7124]
gi|432237701|gb|ELK93294.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M7089]
gi|432257087|gb|ELL12393.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
61103]
gi|432258876|gb|ELL14156.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
69096]
gi|432271620|gb|ELL26743.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
70030]
gi|432271776|gb|ELL26898.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
77221]
Length = 442
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|222084693|ref|YP_002543222.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Agrobacterium
radiobacter K84]
gi|398379631|ref|ZP_10537751.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium sp. AP16]
gi|221722141|gb|ACM25297.1| 2-methylthioadenine synthetase (miaB-like) protein [Agrobacterium
radiobacter K84]
gi|397722263|gb|EJK82807.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium sp. AP16]
Length = 470
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 239/443 (53%), Gaps = 40/443 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + GY ++ E A+++ +NTC IR+ A KV+ L
Sbjct: 28 KVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDM-EEADLVLLNTCHIREKAAEKVYSAL 86
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K K+ A GR I V GC+A+ ++IL VDVV GP Y L
Sbjct: 87 GRLRDMK---KRKAADGREM-----MIGVTGCVAQAEGEEILRRAPAVDVVIGPQTYHRL 138
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADI-SPVR--ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P L GQ+ ++T +LE+ + + +P R I VTAF++V GC+ C+FC+VP
Sbjct: 139 PDALRRAKEGQRVVDTEYALEDKFEHLPTPERSKIRARGVTAFLTVQEGCDKFCTFCVVP 198
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR V IV+E ++L GV+E+TLLGQNVN+++ G W L
Sbjct: 199 YTRGSEVSRSVAQIVEEAEKLVDGGVREITLLGQNVNAWHGAG------PKGEAWSL--- 249
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
DLL RLS E P + R RYT+ HP+D D L+ RD + Y+H
Sbjct: 250 --------------GDLLYRLS-EIPGLARLRYTTSHPRDMDDRLISAHRDLRTLMPYLH 294
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G++ +L+ M R +T Y L++KIR PD+ LS DFI GF GETE++ ADTL
Sbjct: 295 LPVQSGSNRILKAMNRRHTAAEYFALIEKIRAARPDIALSGDFIVGFPGETEQDFADTLR 354
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L++ V Y A+ F YS R T D VPEE+K RL L + D+ VG
Sbjct: 355 LVEEVNYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLERLQALLLKQQHAFADACVG 413
Query: 494 TVQLVLVEGPNKKAPDTELVGKS 516
V VL+E P + +L+G+S
Sbjct: 414 KVVDVLLEKPGRMP--GQLIGRS 434
>gi|410419108|ref|YP_006899557.1| hypothetical protein BN115_1315 [Bordetella bronchiseptica MO149]
gi|408446403|emb|CCJ58071.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
Length = 475
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 252/467 (53%), Gaps = 43/467 (9%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
+P+ + AT ++ G++Y T+GCQMN D + + +++ E+ + PE+A+VI
Sbjct: 12 SPSDAGTPATAAQ--GLGKLYIRTFGCQMNEYDSDKMADVLRADQGLELTDNPEDADVIL 69
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
NTC++R+ A+ KV+ L LK++ N+ G V GC+A + + I+
Sbjct: 70 FNTCSVREKAQEKVFSDLGRVQHLKKQ-NPNLVIG-----------VGGCVASQEGEAIV 117
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFV 238
VDVV GP LP L++ G ++ E + + P R+ + TAFV
Sbjct: 118 KRAPYVDVVFGPQTLHRLPDLIKRRRAQGVSQVDISFPEIEKFDALPPPRV--DGATAFV 175
Query: 239 SVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG 298
S+M GC+ CSFC+VP+TRG E SRP + ++ EV +L +GVKEVTLLGQNVN+Y G
Sbjct: 176 SIMEGCSKYCSFCVVPYTRGEEVSRPFDDVLLEVADLADQGVKEVTLLGQNVNAYRGAMG 235
Query: 299 MEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDE 357
E+ FA LL+ + E P + R RYT+ HPK+
Sbjct: 236 DSGEIA----------------------DFAMLLEYVH-EIPGIERIRYTTSHPKEMTQR 272
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
++ P + ++HLP Q G+ VL M+RGYT + +V+++R P + LSSDFI
Sbjct: 273 MVDAYARLPKLVSFLHLPVQAGSDRVLAAMKRGYTALEFKSVVRRLRAARPSLTLSSDFI 332
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GF GETEE+ T+ L++ VG+D ++ F YS R T A + DD P++VK RRL +L
Sbjct: 333 VGFPGETEEDFQKTMKLIEDVGFDTSFSFVYSRRPGTPAA-DLHDDTPQDVKLRRLQQLQ 391
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +GT Q VLVEGP+++ P+ EL+G+++ V F
Sbjct: 392 ALINQQAAAIAQGMIGTRQRVLVEGPSRRDPN-ELMGRTENNRIVNF 437
>gi|440732806|ref|ZP_20912603.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
translucens DAR61454]
gi|440366639|gb|ELQ03717.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xanthomonas
translucens DAR61454]
Length = 471
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 240/450 (53%), Gaps = 34/450 (7%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ A E+ + PE+A+V+ +NTC+IR+ A+ KV+
Sbjct: 23 RGKLYIKTHGCQMNEYDSAKMADVLAAAEGLELTDNPEDADVVLVNTCSIREKAQEKVFS 82
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L WK A G+ P I V GC+A + + I+ VD+V GP
Sbjct: 83 QLG-------RWKALKAGGK-----PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 130
Query: 196 DLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L+ G+ ++ E + + R S AFVS+M GC+ CSFC+VP
Sbjct: 131 RLPELIRARRASGKPQVDISFPEVEKFDRLPEPRAEGPS--AFVSIMEGCSKYCSFCVVP 188
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y + E L
Sbjct: 189 YTRGEEISRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGPYADAEAGEQPQYADLGLL 248
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
S+ ++ +G R R+T+ HP +F D L+ RD P + Y+HL
Sbjct: 249 IRSIAQIDGIG-----------------RIRFTTSHPLEFSDSLVDAYRDVPQLANYLHL 291
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GET+ + T+ L
Sbjct: 292 PVQAGSDRILSAMKRGYTALEFKQKIRKLRAVRPDISISSDFIVGFPGETDADFDKTMQL 351
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG+D ++ F YS R T A + D P+ VK RL L + Q + VG+
Sbjct: 352 IEDVGFDQSFSFIYSRRPGTPAA-DLEDSTPDAVKHARLARLQAHINAHSLQLSRAMVGS 410
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLVEGP+KK P EL GK++ V F
Sbjct: 411 VQTVLVEGPSKKNP-AELTGKTENMRSVNF 439
>gi|296327837|ref|ZP_06870374.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|296155051|gb|EFG95831.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 435
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 245/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY +V +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DVTEEIDNADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVEGDYIVRFVSPHPRDFTDDVIEVIAKNEKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L++MRRGYT+E YL LV KI+ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILKKMRRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL L+E + + G +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIEESVKKERLQRLMEVQNKCSFYESSKYKGRIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 381 KVLVEGPSKKNKEV-LSGRTSTNKIVLF 407
>gi|385337404|ref|YP_005891277.1| putative MiaB-like tRNA modification enzyme [Neisseria meningitidis
WUE 2594]
gi|385339392|ref|YP_005893264.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
G2136]
gi|385851954|ref|YP_005898469.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M04-240196]
gi|416174335|ref|ZP_11609169.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
OX99.30304]
gi|416189074|ref|ZP_11615090.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M0579]
gi|416207929|ref|ZP_11621016.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
961-5945]
gi|421543116|ref|ZP_15989213.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM255]
gi|433467911|ref|ZP_20425360.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
87255]
gi|433476287|ref|ZP_20433622.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
88050]
gi|433480644|ref|ZP_20437925.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
63041]
gi|433514178|ref|ZP_20470961.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
63049]
gi|433516410|ref|ZP_20473172.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
2004090]
gi|433518377|ref|ZP_20475116.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
96023]
gi|433519681|ref|ZP_20476402.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
65014]
gi|433524786|ref|ZP_20481441.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
97020]
gi|433527635|ref|ZP_20484247.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM3652]
gi|433531135|ref|ZP_20487715.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM3642]
gi|433532022|ref|ZP_20488589.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
2007056]
gi|433535257|ref|ZP_20491789.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
2001212]
gi|433540814|ref|ZP_20497269.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
63006]
gi|319409818|emb|CBY90126.1| putative MiaB-like tRNA modification enzyme [Neisseria meningitidis
WUE 2594]
gi|325129521|gb|EGC52348.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
OX99.30304]
gi|325135644|gb|EGC58261.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M0579]
gi|325141561|gb|EGC64027.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
961-5945]
gi|325197636|gb|ADY93092.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
G2136]
gi|325206777|gb|ADZ02230.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
M04-240196]
gi|402315322|gb|EJU50886.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM255]
gi|432201463|gb|ELK57544.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
87255]
gi|432208142|gb|ELK64121.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
88050]
gi|432213921|gb|ELK69831.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
63041]
gi|432245666|gb|ELL01131.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
63049]
gi|432251262|gb|ELL06633.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
2004090]
gi|432251687|gb|ELL07050.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
96023]
gi|432255672|gb|ELL11001.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
65014]
gi|432257837|gb|ELL13130.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
97020]
gi|432264576|gb|ELL19778.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM3642]
gi|432266535|gb|ELL21718.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
NM3652]
gi|432268667|gb|ELL23834.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
2007056]
gi|432269889|gb|ELL25037.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
2001212]
gi|432277829|gb|ELL32875.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
63006]
Length = 442
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|78042734|ref|YP_360230.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Carboxydothermus hydrogenoformans Z-2901]
gi|123576193|sp|Q3ACA4.1|MIAB_CARHZ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|77994849|gb|ABB13748.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydothermus
hydrogenoformans Z-2901]
Length = 440
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 253/450 (56%), Gaps = 49/450 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPE--NAEVIFINTCAIRDYAEHKVWQRL 137
Y T+GCQMNV+D E + I+++ G+ + PE A++I INTC++R+ AE+KV+ ++
Sbjct: 7 YIITHGCQMNVHDSETIAGILESMGF---VPSPEEKTADLIIINTCSVRETAENKVFTKI 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCM--AERLKDKILDADKMVDVVCGPDAY 194
LKRE +P ++ V GC+ E++ ++L+ +D + G
Sbjct: 64 GELKKLKRE-------------NPDLVIGVGGCIPQQEKVAKRLLERFPHLDFIFGTHNL 110
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
+LP++LE V + + + E + PV+ + V A+V++M GCNN C++CIVP
Sbjct: 111 PELPKILERVFEKHERVLEVWQSEGQIVEGIPVK-REPGVRAWVTIMYGCNNFCTYCIVP 169
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+ RGRERSR E I++E+ +L EG +EVTLLGQNVNSY
Sbjct: 170 YVRGRERSRKKEDILQEIRQLVAEGYREVTLLGQNVNSYGKD------------------ 211
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
K K M FA+LL + R R+T+ HP+D D+++ +M +C+++HL
Sbjct: 212 ----LKGKPM---FAELLADIEKIDGLWRVRFTTSHPRDLTDDVIEVMASSRKICEHLHL 264
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G++ +L+ M RGYTRE YL+LV+KIR IP V ++D I GF GETEE+ TL L
Sbjct: 265 PVQAGSNKILKAMHRGYTREYYLNLVEKIRAKIPKVSFTTDIIVGFPGETEEDFEQTLDL 324
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V YD A+ F Y+ R T A D VPEEVK RR+ ELIE + + ++ G
Sbjct: 325 VRKVRYDSAFTFVYNKRTGTPAA-EMKDQVPEEVKSRRIQELIELQNGISLELNKNEEGN 383
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEG + K +T+L G++ V F
Sbjct: 384 IHEILVEGKS-KTDETKLAGRTRTNKLVVF 412
>gi|218767554|ref|YP_002342066.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
meningitidis Z2491]
gi|229890575|sp|A1IQ34.1|MIAB_NEIMA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|121051562|emb|CAM07860.1| hypothetical protein NMA0590 [Neisseria meningitidis Z2491]
Length = 442
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/437 (37%), Positives = 245/437 (56%), Gaps = 46/437 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK E K + G V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-EKKPGLIIG-----------VAGCVASQEGENIIKRAPYVDVVFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+V
Sbjct: 111 LPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCVV 166
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 167 PYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++
Sbjct: 214 ---EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHL 262
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL
Sbjct: 263 HLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTL 322
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L+K + +D++++F YS R T A N DD P E K RRL L E T + + +
Sbjct: 323 KLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTMI 381
Query: 493 GTVQLVLVEGPNKKAPD 509
GTVQ LVEG +KK PD
Sbjct: 382 GTVQRCLVEGISKKDPD 398
>gi|395787145|ref|ZP_10466746.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella birtlesii LL-WM9]
gi|395411569|gb|EJF78090.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella birtlesii LL-WM9]
Length = 458
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 239/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P +A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSQGYV-TTQTPNDADLILVNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
L++E R+ K P + V GC+A+ +IL VD+V GP Y L
Sbjct: 75 GRLRVLRQE--------RAPDK-PLMVGVTGCVAQAEGSEILRRAPTVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K I T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PDLLEKAKQGKKVIETDYAVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRPVE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 186 YTRGAEISRPVEQITEEARQLIEAGVKEITLLGQNVNGWHGQSAH------GKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSIHYLQLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETIKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K V Y AY F YS R T +N+VD E VK RL L E S++
Sbjct: 343 IKQVQYSSAYSFKYSPRPGTVGATMKNHVD---EAVKDARLQHLQVLLLEQQDAFLRSKI 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + ++VG+S
Sbjct: 400 GQTTDVLIEKAGRHS--GQMVGRS 421
>gi|433678609|ref|ZP_20510448.1| bifunctional enzyme involved in thiolation and methylation of tRNA
[Xanthomonas translucens pv. translucens DSM 18974]
gi|430816277|emb|CCP40947.1| bifunctional enzyme involved in thiolation and methylation of tRNA
[Xanthomonas translucens pv. translucens DSM 18974]
Length = 471
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 241/450 (53%), Gaps = 34/450 (7%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ A E+ + PE+A+V+ +NTC+IR+ A+ KV+
Sbjct: 23 RGKLYIKTHGCQMNEYDSAKMADVLAAAEGLELTDNPEDADVVLVNTCSIREKAQEKVFS 82
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L WK A G+ P I V GC+A + + I+ VD+V GP
Sbjct: 83 QLG-------RWKALKAGGK-----PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 130
Query: 196 DLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L+ + G+ ++ E + + R S AFVS+M GC+ CSFC+VP
Sbjct: 131 RLPELIRARRESGKPQVDISFPEVEKFDRLPEPRAEGPS--AFVSIMEGCSKYCSFCVVP 188
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y + E L
Sbjct: 189 YTRGEEISRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGPYADAEAGEQPQYADLGLL 248
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
S+ ++ +G R R+T+ HP +F D L+ RD P + Y+HL
Sbjct: 249 IRSIAQIDGIG-----------------RIRFTTSHPLEFSDSLVDAYRDVPQLANYLHL 291
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GET+ + T+ L
Sbjct: 292 PVQAGSDRILSAMKRGYTALEFKQKIRKLRAVRPDISISSDFIVGFPGETDADFDKTMQL 351
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG+D ++ F YS R T A + D P+ VK RL L + Q + VG+
Sbjct: 352 IEDVGFDQSFSFIYSRRPGTPAA-DLKDSTPDAVKHARLARLQAHINAHSLQRSRAMVGS 410
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLVEGP+KK P EL GK++ V F
Sbjct: 411 VQTVLVEGPSKKNP-AELTGKTENMRSVNF 439
>gi|146297053|ref|YP_001180824.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|229890495|sp|A4XL48.1|MIAB_CALS8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|145410629|gb|ABP67633.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 471
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/427 (36%), Positives = 240/427 (56%), Gaps = 44/427 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNV+D E + ++ GY E N+ E A++I NTCA+R++AE +V+ +
Sbjct: 42 TYGCQMNVHDSEKLAGMLNAMGYVETQNL-EEADLIIFNTCAVREHAESRVYGNIG---- 96
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAERLK--DKILDADKMVDVVCGPDAYRDLPR 199
R + K P I+ V GCM ++L+ K+ +D++ G + P+
Sbjct: 97 ---------PLKRLKDKKPELIIGVCGCMPQQLEVAQKLAKVFPFLDIIFGTKSLHKFPQ 147
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL + +K + + E+ + P + V+AFV+++ GCNN CS+CIVP+ RGR
Sbjct: 148 LLYKAITTKKTVIDVAEDEDVVVEGIPTA-RREGVSAFVNIIYGCNNFCSYCIVPYVRGR 206
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+ E+ +L GVKEVTLLGQNVNSY
Sbjct: 207 ERSRRPEEIIFEIQQLAANGVKEVTLLGQNVNSYG------------------------- 241
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
K G+ F LL++++ R R+ + HPKD DEL++ MRD VC++IHLP Q+G
Sbjct: 242 KDLPDGIPFYKLLEKVNAIEGIERIRFVTSHPKDLSDELIFAMRDLEKVCEHIHLPVQSG 301
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L +M R YT+E YL LV+K+++ IPD+ +++D I GF GETEE+ DTL +++ V
Sbjct: 302 STRILRQMNRHYTKEDYLRLVEKLKENIPDIAITTDIIVGFPGETEEDFEDTLDVVRKVE 361
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D AY F YS R+ T A + + VP+EVK R L++ E + +G V +L
Sbjct: 362 FDSAYTFIYSKRKGTKAAQ-MPNQVPDEVKHERFQRLVKLVEEIALKKNQQMLGKVCEIL 420
Query: 500 VEGPNKK 506
++G +K+
Sbjct: 421 IDGYSKR 427
>gi|114319555|ref|YP_741238.1| tRNA-i(6)A37 thiotransferase MiaB [Alkalilimnicola ehrlichii
MLHE-1]
gi|114225949|gb|ABI55748.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkalilimnicola ehrlichii
MLHE-1]
Length = 508
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 254/450 (56%), Gaps = 43/450 (9%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
GR+Y +T+GCQMN D + + ++ K GY+ V + P +A+VI +NTC++R+ A+ KV+
Sbjct: 63 GRVYVKTHGCQMNEYDSDKMADVLVKERGYTRV-DSPGDADVILLNTCSVREKAQEKVFS 121
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L WK ++++ I V GC+A + + I+ VDVV GP
Sbjct: 122 ELG-------RWKDY------KTRNGAVIGVGGCVASQEGEAIVQRAPHVDVVFGPQTLH 168
Query: 196 DLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +++ D G+ ++ E + + R TAFVS+M GC+ CSFC+VP
Sbjct: 169 RLPEMIDRARDGGRSVVDVSFPEIEKFDRLPEPR--AEGPTAFVSIMEGCSKYCSFCVVP 226
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP E ++ EV L ++GV+EVTLLGQNVN+Y P A+
Sbjct: 227 YTRGEEISRPFEDVIAEVASLAEQGVREVTLLGQNVNAYRG---------PMAD------ 271
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
++C + + + + LD + R R+T+ HP +F D L+ R+ P + ++HL
Sbjct: 272 -GTVCDLALL-IHYVAALDGIG------RIRFTTSHPVEFSDSLIEAYREEPKLAGHLHL 323
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ VL+ M+RG+T YLD +++I+ P + ++SDFI G+ GE+E + DTL L
Sbjct: 324 PVQSGSDLVLKLMKRGHTAAEYLDKIERIKAARPGISIASDFIVGYPGESEADFEDTLRL 383
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++AVG+D ++ F YS R T A + D P EVK+ RL L E + + +S VGT
Sbjct: 384 IEAVGFDQSFSFLYSPRPGTPAA-SLSDSTPAEVKRERLYRLQETINANARRISESMVGT 442
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLV+G ++K P+ E+ G+++ V F
Sbjct: 443 VQRVLVDGRSRKDPN-EISGRTENNRVVNF 471
>gi|255525224|ref|ZP_05392166.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium
carboxidivorans P7]
gi|255511087|gb|EET87385.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium
carboxidivorans P7]
Length = 449
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 246/447 (55%), Gaps = 43/447 (9%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ET+GCQMN D E + ++K GY E V +++++I NTC +R+ AE KV+ L
Sbjct: 16 FIETWGCQMNEEDSEKLSGMLKKIGY-ERTEVKQDSDLIIFNTCCVRENAELKVYGNLGA 74
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCM--AERLKDKILDADKMVDVVCGPDAYRDL 197
LK + + I + GCM E + +I+ VD++ G
Sbjct: 75 LKKLKDKKPDLI------------IAICGCMMQQEGMAKEIVKRFPFVDIIFGTHNAYKF 122
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L V Q I + + E+ + P+ K+ V AFV++M GCNN C++CIVPF R
Sbjct: 123 PEYLNRVKQEQNSIIEIQNKEDGIVEGLPID-RKSDVKAFVTIMYGCNNFCTYCIVPFVR 181
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR E I E+ +L +G KE+TLLGQNVNSY K++EP +
Sbjct: 182 GRERSRKPEDIENEIKDLISKGYKEITLLGQNVNSYG------KDLEPKVS--------- 226
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
FA+LL R++ R ++ +PHPKDF ++L + + NVC+ +HLP Q
Sbjct: 227 ----------FANLLRRINEIEGLERIKFMTPHPKDFTQDVLDAIAECENVCEQVHLPVQ 276
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L++M R YT+E YLDLV++IR+ IPDV +++D I GF GETEE+ +TL+L +
Sbjct: 277 SGSSRILKKMNRHYTKEQYLDLVRRIRETIPDVAITTDIIVGFPGETEEDFEETLSLARE 336
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V YD A+ F YS R+ T A + + E+VK R L+E S+ + G ++
Sbjct: 337 VQYDSAFTFIYSRRKGTPADE-MEEQIAEDVKHERFNRLVEIINASSAKNNKKYEGRIEE 395
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+LVE +K DT+L G++ G V F
Sbjct: 396 ILVEDFSKN-DDTKLTGRTRTGKLVNF 421
>gi|403667543|ref|ZP_10932848.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Kurthia sp.
JC8E]
Length = 506
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 263/459 (57%), Gaps = 50/459 (10%)
Query: 72 EVHSQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAE 130
E +GR + +T+GCQMNV+D E++ I ++ GY +V +A VI +NTCAIR+ AE
Sbjct: 56 EGMGKGRKFMIQTFGCQMNVHDTEVMAGIFESLGYEATEDV-NDANVILMNTCAIRENAE 114
Query: 131 HKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDV 187
++V+ L + LK +K+P ++ V GCM+ E + +KIL VD+
Sbjct: 115 NRVFGELGHLKPLK-------------TKNPDLLLGVCGCMSQEEAVVNKILKTYDQVDI 161
Query: 188 VCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 247
+ G LP +L E ++ + + S E + P ++ A+V++M GC+
Sbjct: 162 IFGTHNIHKLPEILHEAYMSKEMVIDVWSKEGDVIENMP-KVRNGGTKAWVNIMYGCDKF 220
Query: 248 CSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN-DTSGMEKEVEPG 306
C++CIVP+TRG+ERSR + I++EV EL +G +E+TLLGQNVN+Y D G++
Sbjct: 221 CTYCIVPYTRGKERSRLPKDIIQEVRELAAQGYEEITLLGQNVNAYGKDLDGID------ 274
Query: 307 ANWRLSEGFNSMCKVKKMGLRFADLLDRLSL-EFPEMRFRYTSPHPKDFPDELLYIMRDR 365
GL +L+D L L + P R R+T+ HP+DF D L+ ++ +
Sbjct: 275 -----------------YGL--GNLMDELRLIDVP--RIRFTTSHPRDFDDHLIDVLAKK 313
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETE 425
N+ ++IHLP Q+G++++L+ M R YTRE YL+LV KI++ IPDV L++D I GF ETE
Sbjct: 314 GNLVEHIHLPVQSGSTSMLKIMARKYTRERYLELVSKIKKAIPDVALTTDIIVGFPNETE 373
Query: 426 EEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG 485
E+ +TL+L + VG++MA+ + YS RE T A + D+VP +VK+ RL L E +G
Sbjct: 374 EQFEETLSLYREVGFEMAFTYIYSPREGTPAAK-MKDNVPMDVKKDRLQRLNALVSEFSG 432
Query: 486 QCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ V VLV+G +K+ D L G + R V F
Sbjct: 433 KALQQYKDQVVEVLVDGESKRNKDV-LAGYTRRNKLVNF 470
>gi|390934969|ref|YP_006392474.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570470|gb|AFK86875.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 471
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 259/458 (56%), Gaps = 61/458 (13%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ + ETYGCQMNV+D E + ++ GY N+ E+A+VI NTC +R +AE +++ R+
Sbjct: 34 KFHIETYGCQMNVHDSEKLAGMLTEMGYQNTDNL-EDADVILFNTCCVRQHAEIRIFGRV 92
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK----MVDVVCGPDA 193
+ LK+ K N+ G + GCM + + ++++A + +D+V G
Sbjct: 93 SQLKELKQR-KPNIILG-----------ICGCMMQ--EKEVVEAIRKDYPYIDMVFGTHN 138
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADIS------PVRISKNSVTAFVSVMRGCNNM 247
P LL+E +N+ ++ + + D S P+R ++ + A+V+++ GCNN
Sbjct: 139 LFKFPELLQE------ALNSDTTIIDVWDDNSNIIEDIPIRRAE-GLKAWVNIIYGCNNF 191
Query: 248 CSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY-NDTSGMEKEVEPG 306
C++CIVP+ RGRE+SR I+ E+ L EG KE+TLLGQNVNSY ND S
Sbjct: 192 CTYCIVPYVRGREKSREPNDILDEIKSLADEGFKEITLLGQNVNSYGNDLS--------- 242
Query: 307 ANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRP 366
+ FADLL ++ R R+ + HPKD D+L++ MRD
Sbjct: 243 -----------------QKVDFADLLYMINDINGIERIRFMTSHPKDISDKLIFAMRDLD 285
Query: 367 NVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEE 426
VC+++HLP Q+G++ +LE+M R YTRE YL++++K+R IPD+ +++D I GF GET+E
Sbjct: 286 KVCEHLHLPVQSGSNRILEKMNRKYTRERYLEIIEKLRDNIPDIAITTDIIVGFPGETDE 345
Query: 427 EHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQ 486
+ DTL L+K V YD AY F YS R+ T A + D V E++K +RL ELIE + +
Sbjct: 346 DFQDTLDLVKKVKYDSAYTFIYSKRKGTVAEK-MPDQVDEDIKHKRLEELIELQNSISIE 404
Query: 487 CYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G + VLVEG +K+ D +L G++ V F
Sbjct: 405 KNNEMNGKIVEVLVEGISKRDSD-KLTGRTRTNKIVHF 441
>gi|163867522|ref|YP_001608721.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bartonella
tribocorum CIP 105476]
gi|229890428|sp|A9IMW7.1|MIAB_BART1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|161017168|emb|CAK00726.1| bifunctional enzyme [Bartonella tribocorum CIP 105476]
Length = 458
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 240/444 (54%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P +A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSQGYV-TTQTPNDADLILVNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E R+ K P + V GC+A+ +IL +VD+V GP Y L
Sbjct: 75 GRLRVMRQE--------RTPDK-PLTVGVTGCVAQAEGSEILRRAPIVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K I T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PELLEKAKQGKKIIETDYAVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 186 YTRGAEISRSVEQITEEARQLIEAGVKEITLLGQNVNGWHGQSA------DGKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDMLMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSSYYLHLIEKIRAARPDIAFSGDFIVGFPGETDEDFEETIKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
++ V Y AY F YS R T +N+VD E VK RL L E S++
Sbjct: 343 IQQVQYSSAYSFKYSPRPGTVGATMKNHVD---ESVKDARLQHLQVLLLEQQNTFLRSKI 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E P + + ++VG+S
Sbjct: 400 GQKTDVLIEKPGRHS--GQMVGRS 421
>gi|333370927|ref|ZP_08462897.1| tRNA-I(6)A37 modification enzyme MiaB [Desmospora sp. 8437]
gi|332976877|gb|EGK13699.1| tRNA-I(6)A37 modification enzyme MiaB [Desmospora sp. 8437]
Length = 495
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 173/448 (38%), Positives = 255/448 (56%), Gaps = 49/448 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMNV+D E + I++ GY V E A VI INTCAIR+ AE KV+ +
Sbjct: 54 KTYGCQMNVHDSETIAGILELMGYRPT-EVEEEAAVILINTCAIRENAEDKVFGEIGRLK 112
Query: 142 FLKREWKKNVATGRSQSKHPPKIVV--LGCMA--ERLKDKILDADKMVDVVCGPDAYRDL 197
LK E P++V+ GCM+ E + ++IL + VD++ G L
Sbjct: 113 TLKTE--------------KPELVLGMCGCMSQEESVVNRILQKHQHVDLIFGTHNIHRL 158
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL E ++ + + S E + P ++ ++ + A+V++M GC+ C++CIVP+TR
Sbjct: 159 PHLLREALMSKEMVVEVWSKEGDIVENLP-KVREDGLKAWVNIMYGCDKFCTYCIVPYTR 217
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G+ERSR E ++ E+ +L ++G +EVTLLGQNVN+Y G ++
Sbjct: 218 GKERSRRPEDVLAEIRDLARKGYREVTLLGQNVNAY------------GKDF-------- 257
Query: 318 MCKVKKMGLRFADLL-DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ RF DL+ D + P R R+T+ HP+DF D L+ ++ R N+ ++IHLPA
Sbjct: 258 ----EDRDYRFGDLMEDVRKIGIP--RVRFTTSHPRDFDDHLIEVLARRGNLVEHIHLPA 311
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+GN+A+L+ M R YTRE +L+LV KI+ IPDV L++D I G+ GETEE+ DTL+LM+
Sbjct: 312 QSGNNAILKIMARKYTRERFLELVAKIKAAIPDVVLTTDIIVGYPGETEEQFEDTLSLMR 371
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D A+ F YS RE T A + DDVP VK+ RL L E + + + V
Sbjct: 372 EVEFDSAFTFIYSPREGTPAAK-MKDDVPMNVKKERLYRLNHLQDEISRKKNLALKDQVV 430
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +KK P+ L G++ V F
Sbjct: 431 EVLVEGESKKDPNV-LSGRTRTNKLVNF 457
>gi|424793635|ref|ZP_18219722.1| 2-methylthioadenine synthetase [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796500|gb|EKU24996.1| 2-methylthioadenine synthetase [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 471
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 240/450 (53%), Gaps = 34/450 (7%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ A E+ + PE+A+V+ +NTC+IR+ A+ KV+
Sbjct: 23 RGKLYIKTHGCQMNEYDSAKMADVLAAAEGLELTDNPEDADVVLVNTCSIREKAQEKVFS 82
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L WK A G+ P I V GC+A + + I+ VD+V GP
Sbjct: 83 QLG-------RWKALKAGGK-----PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 130
Query: 196 DLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP L+ G+ ++ E + + R S AFVS+M GC+ CSFC+VP
Sbjct: 131 RLPELIRARRASGKPQVDISFPEVEKFDRLPEPRAEGPS--AFVSIMEGCSKYCSFCVVP 188
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y + E L
Sbjct: 189 YTRGEEISRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGPYADAEAGEEPQYADLGLL 248
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
S+ ++ +G R R+T+ HP +F D L+ RD P + Y+HL
Sbjct: 249 IRSIAQIDGIG-----------------RIRFTTSHPLEFSDSLVDAYRDVPQLANYLHL 291
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GET+ + T+ L
Sbjct: 292 PVQAGSDRILSAMKRGYTALEFKQKIRKLRAVRPDISISSDFIVGFPGETDADFDKTMQL 351
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG+D ++ F YS R T A + D P+ VK RL L + Q + VG+
Sbjct: 352 IEDVGFDQSFSFIYSRRPGTPAA-DLEDSTPDAVKHARLARLQAHINAHSLQLSRAMVGS 410
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLVEGP+KK P EL GK++ V F
Sbjct: 411 VQTVLVEGPSKKNP-AELTGKTENMRSVNF 439
>gi|33600343|ref|NP_887903.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
bronchiseptica RB50]
gi|410474025|ref|YP_006897306.1| hypothetical protein BN117_3511 [Bordetella parapertussis Bpp5]
gi|427813578|ref|ZP_18980642.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|81431747|sp|Q7WMN3.1|MIAB_BORBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|33567942|emb|CAE31855.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408444135|emb|CCJ50844.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|410564578|emb|CCN22125.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 475
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 252/467 (53%), Gaps = 43/467 (9%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
+P+ + AT ++ G++Y T+GCQMN D + + +++ E+ + PE+A+VI
Sbjct: 12 SPSDAGTPATTAQ--GLGKLYIRTFGCQMNEYDSDKMADVLRADQGLELTDNPEDADVIL 69
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
NTC++R+ A+ KV+ L LK++ N+ G V GC+A + + I+
Sbjct: 70 FNTCSVREKAQEKVFSDLGRVQHLKKQ-NPNLVIG-----------VGGCVASQEGEAIV 117
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFV 238
VDVV GP LP L++ G ++ E + + P R+ + TAFV
Sbjct: 118 KRAPYVDVVFGPQTLHRLPDLIKRRRAQGVSQVDISFPEIEKFDALPPPRV--DGATAFV 175
Query: 239 SVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG 298
S+M GC+ CSFC+VP+TRG E SRP + ++ EV +L +GVKEVTLLGQNVN+Y G
Sbjct: 176 SIMEGCSKYCSFCVVPYTRGEEVSRPFDDVLLEVADLADQGVKEVTLLGQNVNAYRGAMG 235
Query: 299 MEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDE 357
E+ FA LL+ + E P + R RYT+ HPK+
Sbjct: 236 DSGEIA----------------------DFAMLLEYVH-EIPGIERIRYTTSHPKEMTQR 272
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
++ P + ++HLP Q G+ VL M+RGYT + +V+++R P + LSSDFI
Sbjct: 273 MVDAYARLPKLVSFLHLPVQAGSDRVLAAMKRGYTALEFKSVVRRLRAARPSLTLSSDFI 332
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GF GETEE+ T+ L++ VG+D ++ F YS R T A + DD P++VK RRL +L
Sbjct: 333 VGFPGETEEDFQKTMKLIEDVGFDTSFSFVYSRRPGTPAA-DLHDDTPQDVKLRRLQQLQ 391
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +GT Q VLVEGP+++ P+ EL+G+++ V F
Sbjct: 392 ALINQQAAAIAQGMIGTRQRVLVEGPSRRDPN-ELMGRTENNRIVNF 437
>gi|311108329|ref|YP_003981182.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Achromobacter
xylosoxidans A8]
gi|310763018|gb|ADP18467.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Achromobacter
xylosoxidans A8]
Length = 477
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 245/449 (54%), Gaps = 41/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y T+GCQMN D + + +++ E+ + PE+A+VI NTC++R+ A+ KV+ L
Sbjct: 30 KLYIRTFGCQMNEYDSDKMADVLRGDQGLELTDNPEDADVILFNTCSVREKAQEKVFSDL 89
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK+ N+ G V GC+A + + I+ VDVV GP L
Sbjct: 90 GRVQHLKK-TNPNLVIG-----------VGGCVASQEGEAIVKRAPYVDVVFGPQTLHRL 137
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L++ D G+ ++ E + ++ P R+ + TAFVS+M GC+ CSFC+VP+T
Sbjct: 138 PDLIKRRRDEGRSQVDISFPEIEKFDNMPPPRV--DGATAFVSIMEGCSKYCSFCVVPYT 195
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP E ++ EV +L +GVKEVTLLGQNVN+Y E+
Sbjct: 196 RGEEVSRPFEDVLVEVADLADQGVKEVTLLGQNVNAYRGRMTDSDEIAD----------- 244
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
FA LL+ + E P + R RYT+ HPK+ ++ P + ++HLP
Sbjct: 245 -----------FAMLLEYVH-EIPGIERIRYTTSHPKEMTQRMVDAYARLPKLVSFLHLP 292
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ VL M+RGYT + +V+++R PD+ LSSDFI GF GETEE+ T+ L+
Sbjct: 293 VQAGSDRVLAGMKRGYTTLEFKSVVRRLRAARPDLTLSSDFIVGFPGETEEDFEKTMKLI 352
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ VG+D ++ F YS R T A + DD P++VK RRL L E + +GT
Sbjct: 353 EDVGFDTSFSFVYSRRPGTPAA-DLQDDTPQDVKLRRLQRLQALINEQAATIARNMIGTR 411
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LVEGP+++ P+ EL+G+++ V F
Sbjct: 412 QRLLVEGPSRRDPN-ELMGRTENNRIVNF 439
>gi|229890691|sp|Q0ABN9.2|MIAB_ALHEH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
Length = 448
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 254/450 (56%), Gaps = 43/450 (9%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
GR+Y +T+GCQMN D + + ++ K GY+ V + P +A+VI +NTC++R+ A+ KV+
Sbjct: 3 GRVYVKTHGCQMNEYDSDKMADVLVKERGYTRV-DSPGDADVILLNTCSVREKAQEKVFS 61
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L WK ++++ I V GC+A + + I+ VDVV GP
Sbjct: 62 ELG-------RWKDY------KTRNGAVIGVGGCVASQEGEAIVQRAPHVDVVFGPQTLH 108
Query: 196 DLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +++ D G+ ++ E + + R TAFVS+M GC+ CSFC+VP
Sbjct: 109 RLPEMIDRARDGGRSVVDVSFPEIEKFDRLPEPR--AEGPTAFVSIMEGCSKYCSFCVVP 166
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP E ++ EV L ++GV+EVTLLGQNVN+Y P A+
Sbjct: 167 YTRGEEISRPFEDVIAEVASLAEQGVREVTLLGQNVNAYRG---------PMAD------ 211
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
++C + + + + LD + R R+T+ HP +F D L+ R+ P + ++HL
Sbjct: 212 -GTVCDLALL-IHYVAALDGIG------RIRFTTSHPVEFSDSLIEAYREEPKLAGHLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ VL+ M+RG+T YLD +++I+ P + ++SDFI G+ GE+E + DTL L
Sbjct: 264 PVQSGSDLVLKLMKRGHTAAEYLDKIERIKAARPGISIASDFIVGYPGESEADFEDTLRL 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++AVG+D ++ F YS R T A + D P EVK+ RL L E + + +S VGT
Sbjct: 324 IEAVGFDQSFSFLYSPRPGTPAA-SLSDSTPAEVKRERLYRLQETINANARRISESMVGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLV+G ++K P+ E+ G+++ V F
Sbjct: 383 VQRVLVDGRSRKDPN-EISGRTENNRVVNF 411
>gi|421481719|ref|ZP_15929302.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Achromobacter
piechaudii HLE]
gi|400200034|gb|EJO32987.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Achromobacter
piechaudii HLE]
Length = 482
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 254/475 (53%), Gaps = 49/475 (10%)
Query: 52 ASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINV 111
A+ PLAD A E + A S ++Y T+GCQMN D + + +++ E+ +
Sbjct: 17 AASPLAD---ALENTGA-----GSPRKLYIRTFGCQMNEYDSDKMADVLRGDQGLELTDN 68
Query: 112 PENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA 171
PE A+VI NTC++R+ A+ KV+ L LK+ N+ G V GC+A
Sbjct: 69 PEEADVILFNTCSVREKAQEKVFSDLGRVQHLKK-TNPNLVIG-----------VGGCVA 116
Query: 172 ERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDY-GQKGINTLLSLEETYADISPVRIS 230
+ I+ VDVV GP LP L+ G+ ++ E + ++ P R+
Sbjct: 117 SQEGAAIVKRAPYVDVVFGPQTLHRLPDLIARRRAEGRSQVDISFPEIEKFDNMPPPRV- 175
Query: 231 KNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNV 290
+ TAFVS+M GC+ CSFC+VP+TRG E SRP E ++ EV +L +GVKEVTLLGQNV
Sbjct: 176 -DGATAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLVEVADLADQGVKEVTLLGQNV 234
Query: 291 NSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSP 349
N+Y EG + + FA LL+ + E P + R RYT+
Sbjct: 235 NAYRGKM---------------EGTDDIAD-------FAMLLEYVH-EIPGIERIRYTTS 271
Query: 350 HPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPD 409
HPK+ ++ P + ++HLP Q G+ VL M+RGYT + +V+++R PD
Sbjct: 272 HPKEMTQRMVDAYARLPKLVSFLHLPVQAGSDRVLAGMKRGYTTLEFKSVVRRLRAARPD 331
Query: 410 VGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVK 469
+ LSSDFI GF GETEE+ T+ L++ VG+D ++ F YS R T A + DD P++VK
Sbjct: 332 LTLSSDFIVGFPGETEEDFEKTMKLIEDVGFDTSFSFVYSRRPGTPAA-DLTDDTPQDVK 390
Query: 470 QRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
RRL L E + VGT Q +LVEGP+++ P+ EL+G+++ V F
Sbjct: 391 LRRLQRLQALINEQAATIARNMVGTRQRLLVEGPSRRDPN-ELMGRTENNRIVNF 444
>gi|374708575|ref|ZP_09713009.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Sporolactobacillus inulinus CASD]
Length = 494
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 254/434 (58%), Gaps = 47/434 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMN +D E++ I++ GY E + P+ A+VI INTCAIR+ AE+KV+ +
Sbjct: 55 ETYGCQMNEHDTEVMAGILEKMGYHETDD-PKLADVILINTCAIRENAENKVFGHIGTLK 113
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK E K + G V GCMA E + +KIL VD++ G LP+
Sbjct: 114 TLKLE-KPGLILG-----------VCGCMAQEEVVVNKILAKHPQVDLIFGTHNIHRLPQ 161
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL+E + ++ + + S E + P + + A+V++M GC+ C++CIVP+TRG+
Sbjct: 162 LLKEALFSKEMVVEVWSKEGDIVENLP-QSRRGHFQAWVNIMYGCDKFCTYCIVPYTRGK 220
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E IV+EV EL ++G KE+TLLGQNVN+Y K++ N+ L N M
Sbjct: 221 ERSRHPEEIVQEVRELARQGYKEITLLGQNVNAYG------KDLPDLENYGLG---NLMD 271
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+++++G+ R R+T+ HPKDF D L+ ++ N+C++IHLP Q+G
Sbjct: 272 EIRQIGIP---------------RVRFTTSHPKDFDDHLIEVLAKGGNLCEHIHLPVQSG 316
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S +L+ M RGYTRE YL+L KI+ +P+ ++D I GF ET+E+ +TL+L++
Sbjct: 317 SSDILKIMGRGYTRERYLELFHKIKDAVPNASFTTDIIVGFPNETDEQFEETLSLVRECE 376
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQ---RRLTELIEAFRESTGQCYDSQVGTVQ 496
+D + F YS R T A R D++P +VK+ +RL +L++ F + Y Q TV+
Sbjct: 377 FDGGFTFIYSPRAGTPAAR-MKDNIPMDVKKERLQRLNKLMDEFSAKSNAKYQDQ--TVE 433
Query: 497 LVLVEGPNKKAPDT 510
VLVEG ++K P+
Sbjct: 434 -VLVEGESRKNPEV 446
>gi|328948379|ref|YP_004365716.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Treponema succinifaciens
DSM 2489]
gi|328448703|gb|AEB14419.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Treponema succinifaciens
DSM 2489]
Length = 460
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 253/461 (54%), Gaps = 49/461 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGC+MN+ + V I+ + G+ + N + A+++ INTC++R AE +++ RL +
Sbjct: 4 FFETYGCEMNIAESASVEQILISRGWKKAENA-QLADLVVINTCSVRGSAEERIFGRLGF 62
Query: 140 FWFLKR-------EWKKNVATG----RSQSKHPPKIVVLGCMAERLKDKILDADKMVDVV 188
F LK+ K+N+ + P ++V+GCMAERL + VD V
Sbjct: 63 FSGLKKVRSCAPDAKKRNMEIAAEYVQKNGAVPLTLIVMGCMAERLLKSLQKQWPCVDYV 122
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G A +++ V+ GQK I T EE + + + + FV +M GCNN C
Sbjct: 123 VGTFAKNKFGEIIQAVEEGQKYIQTD---EEPVYVFAETSYEEGAFSTFVPIMHGCNNFC 179
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
S+CIVP+ RGRE SRPVE I+ E+D L + GVKE+TLLGQNVNSY GM
Sbjct: 180 SYCIVPYVRGREVSRPVEQILHELDVLARRGVKEITLLGQNVNSYKGADGM--------- 230
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEF-----PEMRFRYTSPHPKDFPDELLYIMR 363
F +LL + P R+ S +PKDF DEL+ ++
Sbjct: 231 ------------------NFPNLLKTICRHLEQTNSPIEWIRFESSNPKDFSDELIDVIA 272
Query: 364 DRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGE 423
+ +C+ +H+ Q G++++L+ M R YTRE YL LVQK+R+ IP++ L++D + GF GE
Sbjct: 273 EEKRICRGLHIAVQHGSNSILKAMNRKYTREQYLLLVQKLRERIPEIQLTTDIMLGFPGE 332
Query: 424 TEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRES 483
TEE+ +LMK V ++ A+M+ Y+ RE T A + + +P EVK+ RL ++I+
Sbjct: 333 TEEDFEQAASLMKEVEFESAFMYYYNPREGTPAAK-MQNQIPLEVKKERLQKIIDIQLGI 391
Query: 484 TGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
T + + QVG VL + ++ + EL+GK+++ R+AF
Sbjct: 392 TRKVMEKQVGKNIKVLADIISRDNAN-ELLGKTEQNERIAF 431
>gi|406834074|ref|ZP_11093668.1| MiaB family RNA modification protein [Schlesneria paludicola DSM
18645]
Length = 483
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 250/445 (56%), Gaps = 49/445 (11%)
Query: 73 VHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
V G+++ ET GCQMN+ D E+V+ ++ GYS +V E A+ + NTC++R++AEHK
Sbjct: 3 VPHNGKLFIETVGCQMNMLDSELVVGALRKEGYSLTDDVQE-ADTVLFNTCSVREHAEHK 61
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
++ L + K V I VLGCMA++ ++ I VD+V G
Sbjct: 62 IYSALGRLKYSKLSRPNQV------------IGVLGCMAQKDQELIFQRAPHVDMVVGTG 109
Query: 193 AYRDLPRLLEEV-DYGQKGINTLLSLEE-TYADIS-------PVR---ISKNSVTAFVSV 240
++PRL+ ++ ++ + L +E T A++S P+R + + AFV +
Sbjct: 110 QLAEVPRLIGAAREHRERSLAISLDRKEGTRAEVSDSFQSYDPLREPEMRPSPYQAFVRI 169
Query: 241 MRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGME 300
M GC+ C++C+VP TRG E+SRP + I +EV L +GVKEVTLLGQ VNSY
Sbjct: 170 MIGCDKFCTYCVVPMTRGPEQSRPPKDIRREVQILADQGVKEVTLLGQTVNSY------- 222
Query: 301 KEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
K + G +RLS DLL+ + +R ++ + PKD D+LL
Sbjct: 223 KVTQDGKLYRLS-----------------DLLEYIHDVDGILRLKFVTNFPKDMTDDLLQ 265
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
+RD P +Y+H+PAQ+G + VL+RM+RGYT E Y ++ +IR +P+ +SSDFI GF
Sbjct: 266 AVRDLPKCAQYLHVPAQSGCNDVLKRMKRGYTIEDYREMFGRIRNTLPNAAVSSDFIVGF 325
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGETEE H +L L++ + +++F YS R T A+ VDD+PE+VK+RR E++
Sbjct: 326 CGETEEAHQKSLDLIRECRFKNSFIFKYSPRPGTKANDLLVDDIPEDVKKRRNNEMLTLQ 385
Query: 481 RESTGQCYDSQVGTVQLVLVEGPNK 505
+ + + + +G VLVEG +K
Sbjct: 386 NQISAEDNAAFIGRRVEVLVEGLSK 410
>gi|240849891|ref|YP_002971280.1| RNA modification enzyme, MiaB family [Bartonella grahamii as4aup]
gi|240267014|gb|ACS50602.1| RNA modification enzyme, MiaB family [Bartonella grahamii as4aup]
Length = 458
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 240/444 (54%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY +P +A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSQGYV-TTQIPNDADLILVNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E R+ K P + V GC+A+ +IL VD+V GP Y L
Sbjct: 75 GRLRVMRQE--------RTPDK-PLMVGVTGCVAQAEGSEILRRAPTVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K I T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PELLEKAKQGKKIIETDYAVEDKFAHLPPHNKHAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 186 YTRGAEISRSVEQITEEALQLIEAGVKEITLLGQNVNGWHGQSA------DGKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDMLMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSSHYLHLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETIKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
++ V Y AY F YS R T +N+VD E VK RL L E S++
Sbjct: 343 IQQVQYSSAYSFKYSPRPGTVGATMKNHVD---ESVKDARLQHLQVLLLEQQNAFLRSKI 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E P + + ++VG+S
Sbjct: 400 GQKTNVLIEKPGRHS--GQMVGRS 421
>gi|392412140|ref|YP_006448747.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Desulfomonile tiedjei DSM 6799]
gi|390625276|gb|AFM26483.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Desulfomonile tiedjei DSM 6799]
Length = 441
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 241/425 (56%), Gaps = 42/425 (9%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
Y ETYGCQMN +D E + +++ G S + P+ AEV+ INTC+IR+ AEHKV+ L
Sbjct: 7 YIETYGCQMNEHDSEKMAAMLDKLGMSAA-SAPDTAEVLIINTCSIREKAEHKVYSALGK 65
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
F LK K + A I+V GC+A++ K+K+L +D V G +LPR
Sbjct: 66 FKSLKTR-KPDTA-----------IIVAGCVAQQEKNKLLKKVPHLDAVLGTHHISELPR 113
Query: 200 LLEEVDYGQKGINTLLSLEETYA--DISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
+L+++ + I + +E+ + ++P++ N V +FV++M+GC+N C++C+VPFTR
Sbjct: 114 ILDKIRAKKSRITSTDFVEDVQSLHMVAPLK-GANPVCSFVTIMQGCSNFCTYCVVPFTR 172
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E+SR ++ I++EV L G++E+TLLGQNVN+Y L+ G+
Sbjct: 173 GPEQSRHMDEILEEVTRLAGTGIREITLLGQNVNAYGKD--------------LARGYA- 217
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
FADLL L R R+T+ HP+DF D ++ M + VC++IHLP Q
Sbjct: 218 ----------FADLLRHLDGIPGLARIRFTTSHPRDFDDSIIAAMTNLETVCEHIHLPLQ 267
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +VL M RGY+ YL V +R IP V +++D I GF GETE + TL ++
Sbjct: 268 SGSDSVLSAMHRGYSFAEYLAKVDSLRDSIPHVAITTDMIVGFPGETEADFMKTLEALER 327
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+ +D + F YS R T A ++ D +PE VK RL+ + E + T Q + S G+V+
Sbjct: 328 IRFDQIFSFKYSARPST-AAQSMPDHIPESVKIERLSRVHELQDQITEQYHRSAEGSVEE 386
Query: 498 VLVEG 502
+L EG
Sbjct: 387 ILAEG 391
>gi|161869349|ref|YP_001598516.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Neisseria
meningitidis 053442]
gi|229890574|sp|A9M1G4.1|MIAB_NEIM0 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|161594902|gb|ABX72562.1| bifunctional enzyme involved in thiolation and methylation of tRNA
[Neisseria meningitidis 053442]
Length = 442
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 246/438 (56%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYCG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|33595815|ref|NP_883458.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
parapertussis 12822]
gi|81429531|sp|Q7WB66.1|MIAB_BORPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|33565894|emb|CAE36442.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 475
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 252/467 (53%), Gaps = 43/467 (9%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
+P+ + AT ++ G++Y T+GCQMN D + + +++ E+ + PE+A+VI
Sbjct: 12 SPSDAGTPATTAQ--GLGKLYIRTFGCQMNEYDSDKMADVLRADQGLELTDNPEDADVIL 69
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
NTC++R+ A+ KV+ L LK++ N+ G V GC+A + + I+
Sbjct: 70 FNTCSVREKAQEKVFSDLGRVQHLKKQ-NPNLVIG-----------VGGCVASQEGEAIV 117
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFV 238
VDVV GP LP L++ G ++ E + + P R+ + TAFV
Sbjct: 118 KRAPYVDVVFGPQTLHRLPDLIKRRRAQGVSQVDISFPEIEKFDALPPPRV--DGATAFV 175
Query: 239 SVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG 298
S+M GC+ CSFC+VP+TRG E SRP + ++ E+ +L +GVKEVTLLGQNVN+Y G
Sbjct: 176 SIMEGCSKYCSFCVVPYTRGEEVSRPFDDVLLEIADLADQGVKEVTLLGQNVNAYRGAMG 235
Query: 299 MEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDE 357
E+ FA LL+ + E P + R RYT+ HPK+
Sbjct: 236 DSGEIA----------------------DFAMLLEYVH-EIPGIERIRYTTSHPKEMTQR 272
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
++ P + ++HLP Q G+ VL M+RGYT + +V+++R P + LSSDFI
Sbjct: 273 MVDAYARLPKLVSFLHLPVQAGSDRVLAAMKRGYTALEFKSVVRRLRAARPSLTLSSDFI 332
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GF GETEE+ T+ L++ VG+D ++ F YS R T A + DD P++VK RRL +L
Sbjct: 333 VGFPGETEEDFQKTMKLIEDVGFDTSFSFVYSRRPGTPAA-DLHDDTPQDVKLRRLQQLQ 391
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +GT Q VLVEGP+++ P+ EL+G+++ V F
Sbjct: 392 ALINQQAAAIAQGMIGTRQRVLVEGPSRRDPN-ELMGRTENNRIVNF 437
>gi|319786436|ref|YP_004145911.1| tRNA-i(6)A37 thiotransferase protein MiaB [Pseudoxanthomonas
suwonensis 11-1]
gi|317464948|gb|ADV26680.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudoxanthomonas
suwonensis 11-1]
Length = 484
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 246/458 (53%), Gaps = 52/458 (11%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
++G++Y +T+GCQMN D + ++ E+ + PE A+V+ +NTC+IR+ A+ KV+
Sbjct: 41 ARGKLYIKTHGCQMNEYDSARMADVLAEHEGLELTDNPEEADVVLVNTCSIREKAQEKVF 100
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
+L W +E + V G V GC+A + + I+ VD+V GP
Sbjct: 101 SQLGR-WKALKEGGREVIIG-----------VGGCVASQEGEAIVKRAPYVDLVFGPQTL 148
Query: 195 RDLPRLLE--------EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNN 246
LP L+ +VD I L E A+ +AFVS+M GC+
Sbjct: 149 HRLPELIRARREQQRPQVDISFPEIEKFDRLPEPRAE---------GPSAFVSIMEGCSK 199
Query: 247 MCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPG 306
CSFC+VP+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y G + E
Sbjct: 200 YCSFCVVPYTRGTEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGPMG--EGTEEV 257
Query: 307 ANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRP 366
A+ L ++ +++ +G R R+T+ HP +F D L+ RD P
Sbjct: 258 ADLGLL--IRTIAQIEGIG-----------------RIRFTTSHPLEFSDSLVEAYRDVP 298
Query: 367 NVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEE 426
+ Y+HLP Q+G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GET+
Sbjct: 299 QLANYLHLPVQSGSDRILGAMKRGYTTLEFKQKIRKLRAVRPDISISSDFIVGFPGETDA 358
Query: 427 EHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQ 486
+ T+ L++ VG+D ++ F YS R T A + DDV +E K RL+ L + +
Sbjct: 359 DFEKTMKLIEDVGFDQSFSFIYSRRPGTPAA-DLPDDVGDEAKHARLSRLQATINANAAR 417
Query: 487 CYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++ VG+VQ VLVEGP+KK P EL GK++ V F
Sbjct: 418 ISEAMVGSVQTVLVEGPSKKNP-AELTGKTENMRSVNF 454
>gi|417957265|ref|ZP_12600190.1| dimethylallyl adenosine tRNA methylthiotransferase [Neisseria
weaveri ATCC 51223]
gi|343968669|gb|EGV36894.1| dimethylallyl adenosine tRNA methylthiotransferase [Neisseria
weaveri ATCC 51223]
Length = 427
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 245/440 (55%), Gaps = 44/440 (10%)
Query: 88 MNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREW 147
MN D E +LS++ + E A++I NTC++R+ A+ KV+ L LK
Sbjct: 1 MNEYDSEKMLSVLAEDDELVQVGEAEEADIILFNTCSVREKAQEKVFSDLGRVKSLK--- 57
Query: 148 KKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEV-D 205
+K+P I+ V GC+A + ++I+ VDVV GP LP+L++E +
Sbjct: 58 ----------AKNPNLIIGVGGCVASQEGEEIVKRAPFVDVVFGPQTLHRLPKLIDEKKE 107
Query: 206 YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPV 265
G+ ++ E + + P R+ S AFVS+M GC+ CSFC+VP+TRG E SRP+
Sbjct: 108 TGRSQVDISFPEIEKFDHLPPARVEGGS--AFVSIMEGCSKYCSFCVVPYTRGEEFSRPL 165
Query: 266 ESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMG 325
++ E+ L ++GVKE+ LLGQNVN+Y E+E G +C
Sbjct: 166 NDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMEDG----------EICD----- 204
Query: 326 LRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVL 384
FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++HLP Q+G+ VL
Sbjct: 205 --FAMLL-RIVHEIPGIERMRFTTSHPREFSDRIIECYRDLPKLVSHLHLPIQSGSDRVL 261
Query: 385 ERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAY 444
M+RGYT Y +++K+R I PD+ LSSDFI GF GETE+E TL L+K + +D+++
Sbjct: 262 SAMKRGYTALEYKSIIRKLRVIRPDLCLSSDFIVGFPGETEQEFEQTLKLVKDIAFDLSF 321
Query: 445 MFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPN 504
+F YS R T A N DD P+E K RRL L E T + S +GTVQ LVEG +
Sbjct: 322 VFIYSPRPGTPAA-NLPDDTPQEEKVRRLEALNEVIEAETARINQSMLGTVQRCLVEGVS 380
Query: 505 KKAPDTELVGKSDRGHRVAF 524
KK PD +L G++ V F
Sbjct: 381 KKDPD-QLQGRTANNRVVNF 399
>gi|440781998|ref|ZP_20960226.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
pasteurianum DSM 525]
gi|440220716|gb|ELP59923.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
pasteurianum DSM 525]
Length = 443
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 171/451 (37%), Positives = 243/451 (53%), Gaps = 46/451 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y ET+GCQMN D E + ++K +GY E + A++I NTC +R+ AE KV+ L
Sbjct: 7 KFYIETWGCQMNEEDSEKLSGMLKLSGY-ERTEDKKKADLIIFNTCCVRENAEQKVYGNL 65
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVL-GCM--AERLKDKILDADKMVDVVCGPDAY 194
A + K P I+ + GCM E + D I+ VD++ G
Sbjct: 66 G-------------ALKSVKEKRPDLIIAICGCMMQQENMADDIIKRFPFVDIIFGTHNS 112
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPV-RISKNSVTAFVSVMRGCNNMCSFCIV 253
LP L V K I + E+ + PV R+SK + AFV++M GCNN C++CIV
Sbjct: 113 HMLPEYLNRVKQEGKSIIEIWDKEKGIVEGLPVDRLSK--IKAFVTIMYGCNNFCTYCIV 170
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+ RGRERSR E I KE+ EL KEG KE+TLLGQNVNSY K+ P
Sbjct: 171 PYVRGRERSRTPEDIEKEIMELVKEGYKEITLLGQNVNSYG------KDFTPA------- 217
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
L FADLL R++ R R+ + HPKD +++ +RD VCK+IH
Sbjct: 218 ------------LDFADLLMRINKIEGLERIRFMTSHPKDLSLKVIEAIRDSEKVCKHIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G+S +L++M R Y RE Y+ L++ I++ IP + LS+D I GF GETEE+ DTL
Sbjct: 266 LPVQSGSSKILKKMNRHYDREYYMKLIKNIKEQIPGIALSTDIIVGFPGETEEDFNDTLK 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L++ V YD A+ F YS R+ T A + + + EEVK R L+ + + +
Sbjct: 326 LIEDVEYDSAFTFLYSPRKGTPASQMEEEMISEEVKHERFNRLVTLVNDISAKKNREYHN 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +K + +L+G++ G V F
Sbjct: 386 KIVEVLVEGTSKN-DENKLMGRTRTGKLVNF 415
>gi|302391921|ref|YP_003827741.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acetohalobium arabaticum
DSM 5501]
gi|302203998|gb|ADL12676.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acetohalobium arabaticum
DSM 5501]
Length = 450
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 247/452 (54%), Gaps = 45/452 (9%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G ETYGCQMN +D E + ++K GY ++I E A+VI +NTC IR+ AE KV
Sbjct: 12 EGLAVIETYGCQMNEHDSEKLAGVLKEKGY-KLIEDTEKADVIILNTCCIRENAEVKVHG 70
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCM--AERLKDKILDADKMVDVVCGPD 192
++ Y KRE +P I+ + GCM E + +KI D VD+V G
Sbjct: 71 KIGYLKQYKRE-------------NPDLIIGICGCMMQQEGMAEKIKDKHPHVDIVFGTH 117
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
+ +LL+ + + I + +E P R + A+V+++ GCNN C++CI
Sbjct: 118 NIHEFSQLLDAAEEESETIIDIWGEKEELIPDLPTR-RETDHKAWVTIIYGCNNFCTYCI 176
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+ RGRE+SR IV E+ EL +GVKEVTLLGQNVNSY
Sbjct: 177 VPYVRGREKSRSSIDIVDEIKELADDGVKEVTLLGQNVNSY------------------- 217
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
G++ K+ FADLL+ L R RY + HP+DF +L+ + D VC++
Sbjct: 218 -GYDLDRKID-----FADLLEELDQIEGIERIRYMTSHPRDFTTKLIKTIADSNKVCEHF 271
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S +LE+M RGYT+E YL LV++IR IP +++DFI GF GE +E+ A+TL
Sbjct: 272 HLPIQSGSSRILEKMNRGYTQEEYLALVEEIRSYIPQAAITTDFIVGFPGERDEDFAETL 331
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V +DMAY F YS R T A + E+VKQ+RL +L++ + + Q +
Sbjct: 332 KLVEEVEFDMAYTFKYSQRSGTPAAE-MEGQIEEDVKQKRLQKLMDIQSDISAQKNKKLL 390
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VL +G +K P+ + G++ V F
Sbjct: 391 GKTVKVLGDGESKNNPERQ-TGRTRTNKIVVF 421
>gi|384428234|ref|YP_005637593.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Xanthomonas campestris
pv. raphani 756C]
gi|341937336|gb|AEL07475.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Xanthomonas campestris
pv. raphani 756C]
Length = 485
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 240/457 (52%), Gaps = 49/457 (10%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+G++Y +T+GCQMN D + ++ + E+ + PE+A+V+ +NTC+IR+ A+ KV+
Sbjct: 36 RGKLYIKTHGCQMNEYDSAKMADVLAASEGLELTDNPEDADVVLVNTCSIREKAQEKVFS 95
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+L WK A G+ P I V GC+A + + I+ VD+V GP
Sbjct: 96 QLG-------RWKALKAGGK-----PVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLH 143
Query: 196 DLPRLL--------EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 247
LP L+ +VD I L E AD +AFVS+M GC+
Sbjct: 144 RLPELIRARRESGKSQVDISFPEIEKFDRLPEPRAD---------GPSAFVSIMEGCSKY 194
Query: 248 CSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGA 307
CSFC+VP+TRG E SRP E ++ EV +L +GV+E+ LLGQNVN+Y G + EP
Sbjct: 195 CSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGADAG-EPAQ 253
Query: 308 NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
L ++ ++ +G R R+T+ HP +F D L+ RD P
Sbjct: 254 YADLGLLIRTIAQIDGIG-----------------RIRFTTSHPLEFSDSLVDAYRDVPQ 296
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
+ Y+HLP Q G+ +L M+RGYT + ++K+R + P + +SSDFI GF GET+ +
Sbjct: 297 LANYLHLPVQAGSDRILSAMKRGYTALEFKSKIRKLRAVRPGISISSDFIVGFPGETDAD 356
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
T+ L++ VG+D ++ F YS R T A + DD P+ VKQ RL L
Sbjct: 357 FDKTMKLIEDVGFDQSFSFIYSRRPGTPAS-DLEDDTPDAVKQARLARLQAHINAHAAGI 415
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VG+VQ VLVEGP+++ + EL GK++ V F
Sbjct: 416 SQRMVGSVQRVLVEGPSRRDAN-ELTGKTENMRPVNF 451
>gi|395789277|ref|ZP_10468800.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella taylorii 8TBB]
gi|395430324|gb|EJF96368.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella taylorii 8TBB]
Length = 458
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 237/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P +A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSQGYV-TTQTPNDADLILVNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
L++E N P + V GC+A+ +IL VD+V GP Y L
Sbjct: 75 GRLRVLRQERAPN---------KPLMVGVTGCVAQAEGSEILRRAPNVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K I T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PDLLEKAKQGKKVIETDYAVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRPVE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 186 YTRGAEISRPVEQITEEARQLIEAGVKEITLLGQNVNGWHGQSAH------GKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSIHYLQLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETIKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K V Y AY F YS R T +N+VD E VK RL L E S+V
Sbjct: 343 IKQVQYSSAYSFKYSPRPGTVGATMKNHVD---EAVKDARLQHLQVLLLEQQNAFLRSKV 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + ++VG+S
Sbjct: 400 GERTDVLIEKAGRYS--GQMVGRS 421
>gi|83589960|ref|YP_429969.1| tRNA-i(6)A37 modification enzyme MiaB [Moorella thermoacetica ATCC
39073]
gi|123725725|sp|Q2RJG3.1|MIAB_MOOTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|83572874|gb|ABC19426.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Moorella thermoacetica
ATCC 39073]
Length = 444
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 246/445 (55%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN D E++ ++++AGY V E A VI ++TC +R+ AE+KV+ +L
Sbjct: 12 TYGCQMNQRDSEMMADLLQDAGYEPVAR-EEEAGVIILDTCCVREKAENKVYGKLGQIEK 70
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK S +P ++ V GCM ++ + +KI VD++ G ++LP+
Sbjct: 71 LK-------------SANPDLVIAVAGCMVQQPGVAEKIRQQAPYVDLLLGTGNLQELPQ 117
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L+EE+ + + E + P R ++ + AFV++ GCNN C++CIVP+ RGR
Sbjct: 118 LIEEIKAMHRPRIVVGEQEGPVVEDLPRRRARGA-QAFVTITYGCNNFCTYCIVPYVRGR 176
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E+I+KEV EL +GV EVTLLGQNVNSY G + R
Sbjct: 177 ERSRRPENIIKEVKELVDQGVIEVTLLGQNVNSY------------GRDLR--------- 215
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
G+ FA LL+R++ R RY + HP+DF EL+ + VC+++HLP Q G
Sbjct: 216 ----DGINFAGLLERVNAVEGLKRIRYVTSHPRDFTPELVTTISRLDKVCEHVHLPVQAG 271
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +LE M RGYTRE YL+LV +R+ IP + L++D I GF GETE + DTL L+ V
Sbjct: 272 SNRILELMHRGYTREHYLELVADLRRHIPGISLTTDLIVGFPGETEADFEDTLDLVARVQ 331
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D A+ F YS R T A +P +K+ RL L+E + ++ VG VL
Sbjct: 332 FDNAFTFMYSPRRGTEAA-TMPGQLPTAIKKERLKRLMELQNSISLAKNEALVGQEVEVL 390
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEGP+K PD +L G++ + F
Sbjct: 391 VEGPSKTDPD-QLSGRTRTNKLIIF 414
>gi|407795674|ref|ZP_11142632.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salimicrobium
sp. MJ3]
gi|407020015|gb|EKE32729.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salimicrobium
sp. MJ3]
Length = 518
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 172/448 (38%), Positives = 251/448 (56%), Gaps = 52/448 (11%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E++ I + GY E E A++I +NTCAIR+ AE+KV+ + +
Sbjct: 81 TYGCQMNEHDTEVMAGIFETMGY-EPTKQAEEADIILLNTCAIRENAENKVFGEIGHLKS 139
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LKRE +P I+ V GCMA E + ++IL +D++ G +P
Sbjct: 140 LKRE-------------NPDLILGVCGCMAQEEGVVNRILQKHPFIDMIFGTHNIHKIPE 186
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL+E + ++ + + S E + P R K + A+V+VM GC+ C++CIVP+TRG+
Sbjct: 187 LLKEAMFSKEMVIDVWSKEGDIIENLP-RSRKGKIKAWVNVMYGCDKFCTYCIVPYTRGK 245
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I++EV L +G KEVTLLGQNVN+Y G + L G
Sbjct: 246 ERSRLPEDIIQEVRHLAAQGYKEVTLLGQNVNAY------------GKDLDLDYGL---- 289
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +IHLP Q+
Sbjct: 290 ---------GDLMDDLHKIDIP--RVRFTTSHPRDFDDRLIEVLAKGGNMLDHIHLPVQS 338
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G+S VL+ M R Y+RE Y++LV+KIR +PD L++D I GF ETEE+ +TL+L++ V
Sbjct: 339 GSSDVLKIMGRKYSREDYMELVRKIRAAMPDATLTTDIIVGFPNETEEQFQETLSLVEEV 398
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQR--RLTELIEAFRESTGQCYDSQVGTVQ 496
G++ AY F +S RE T A + EE K+R RL LI T + Y++++
Sbjct: 399 GFEAAYTFIFSPRENTPAAKMRDKVSMEEKKERLQRLNALINKQARETMETYENEIVH-- 456
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K PD L G + R V F
Sbjct: 457 -VLVEGESKNNPDV-LAGYTKRNKLVNF 482
>gi|89069602|ref|ZP_01156941.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola granulosus
HTCC2516]
gi|89044800|gb|EAR50900.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola granulosus
HTCC2516]
Length = 437
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 234/444 (52%), Gaps = 45/444 (10%)
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
H+ +++ +TYGCQMNV D E + + GY E V E A++I +NTC IR+ A KV
Sbjct: 4 HAPKKLFIKTYGCQMNVYDSERMAEALGGRGYVET-QVAEEADMILLNTCHIREKAAEKV 62
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDA 193
+ L LK E K KI V GC+A+ ++I+ +VD+V GP +
Sbjct: 63 YSELGRLKPLKAE------------KPDLKIGVAGCVAQAEGEEIMRRQPLVDLVVGPQS 110
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
Y LP + + G K ++T E+ ++ ++ ++ TAF++V GC+ C+FC+V
Sbjct: 111 YHRLPAMDAALATGGKALDTDFPAEDKFSGLAARPRAQRGPTAFLTVQEGCDKFCAFCVV 170
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP E +V E L + GV+E+TLLGQNVN+Y+ G
Sbjct: 171 PYTRGAEVSRPAERVVDEARALVEAGVREITLLGQNVNAYHGHEG--------------- 215
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
G + + L D L+R+ RYT+ HP D D L+ D P + Y+H
Sbjct: 216 GLAGLVRT----LAAIDGLERI---------RYTTSHPNDMDDALIAAHGDCPELMPYLH 262
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G+ +L+ M R +T EAYL L++++R PD+ LS DFI GF GETE + ADT+
Sbjct: 263 LPVQSGSDRILKAMNRKHTAEAYLRLIERLRDARPDLALSGDFIVGFPGETEADFADTMG 322
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L++AVGY AY F YS R T A +P +V RL L + ++ VG
Sbjct: 323 LVEAVGYAQAYSFKYSTRPGTPAAEK--PQLPGDVMSDRLARLQALLKAQQTAAQEAMVG 380
Query: 494 TVQLVLVEGPNKKAPDTELVGKSD 517
VL E P + ++VG+SD
Sbjct: 381 REVGVLFEKPGRLP--GQMVGRSD 402
>gi|427820641|ref|ZP_18987704.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427824382|ref|ZP_18991444.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|410571641|emb|CCN19875.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410589647|emb|CCN04720.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 475
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 252/467 (53%), Gaps = 43/467 (9%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIF 119
+P+ + AT ++ G++Y T+GCQMN D + + +++ E+ + PE+A+VI
Sbjct: 12 SPSDAGTPATAAQ--GLGKLYIRTFGCQMNEYDSDKMADVLRADQGLELTDNPEDADVIL 69
Query: 120 INTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKIL 179
NTC++R+ A+ KV+ L LK++ N+ G V GC+A + + I+
Sbjct: 70 FNTCSVREKAQEKVFSDLGRVQHLKKQ-NPNLVIG-----------VGGCVASQEGEAIV 117
Query: 180 DADKMVDVVCGPDAYRDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFV 238
VDVV GP LP L++ G ++ E + + P R+ + TAFV
Sbjct: 118 KRAPYVDVVFGPQTLHRLPDLIKRRRAQGVSQVDISFPEIEKFDALPPPRV--DGATAFV 175
Query: 239 SVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG 298
S+M GC+ CSFC+VP+TRG E SRP + ++ EV +L +GVKEVTLLGQNVN+Y G
Sbjct: 176 SIMEGCSKYCSFCVVPYTRGEEVSRPFDDVLLEVADLADQGVKEVTLLGQNVNAYRGAMG 235
Query: 299 MEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDE 357
++ FA LL+ + E P + R RYT+ HPK+
Sbjct: 236 DSGKIA----------------------DFAMLLEYVH-EIPGIERIRYTTSHPKEMTQR 272
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
++ P + ++HLP Q G+ VL M+RGYT + +V+++R P + LSSDFI
Sbjct: 273 MVDAYARLPKLVSFLHLPVQAGSDRVLAAMKRGYTALEFKSVVRRLRAARPSLTLSSDFI 332
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GF GETEE+ T+ L++ VG+D ++ F YS R T A + DD P++VK RRL +L
Sbjct: 333 VGFPGETEEDFQKTMKLIEDVGFDTSFSFVYSRRPGTPAA-DLHDDTPQDVKLRRLQQLQ 391
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +GT Q VLVEGP+++ P+ EL+G+++ V F
Sbjct: 392 ALINQQAAAIAQGMIGTRQRVLVEGPSRRDPN-ELMGRTENNRIVNF 437
>gi|389573169|ref|ZP_10163244.1| tRNA 2-methylthioadenine synthetase [Bacillus sp. M 2-6]
gi|388426866|gb|EIL84676.1| tRNA 2-methylthioadenine synthetase [Bacillus sp. M 2-6]
Length = 508
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 248/450 (55%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N E+A VI +NTCAIR+ AE+KV+ L
Sbjct: 66 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTNSTEDANVILLNTCAIRENAENKVFGEL 124
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LKRE K ++ G V GCM+ E + ++IL VD++ G
Sbjct: 125 GHLKALKRE-KPDLILG-----------VCGCMSQEESVVNRILKKHPFVDLIFGTHNIH 172
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP LL E ++ + + S E + P R + + +V++M GC+ C++CIVP+
Sbjct: 173 RLPELLSECYLSKEMVIEVWSKEGDVIENLP-RARQGKIKGWVNIMYGCDKFCTYCIVPY 231
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR + I++EV L EG KE+TLLGQNVN+Y + F
Sbjct: 232 TRGKERSRRPDEIIQEVRRLAAEGYKEITLLGQNVNAY------------------GKDF 273
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M + GL L+D L ++ P R R+T+ HP+DF D L+ ++ N+ +IHL
Sbjct: 274 EDM----EYGL--GHLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHL 325
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S+VL+ M R Y RE YLDLV+KI++ +P+ L++D I GF ET+E+ +TL+L
Sbjct: 326 PVQSGSSSVLKLMARKYDRERYLDLVRKIKEAMPNASLTTDIIVGFPNETDEQFEETLSL 385
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A N D+VP VK+ RL L E + + G
Sbjct: 386 YREVEFDAAYTFIYSPREGTPAA-NMKDNVPMRVKKERLQRLNALVNEISAKKMKEYEGQ 444
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K P+ L G + + V F
Sbjct: 445 TVEVLVEGESKNNPEI-LAGYTSKSKLVNF 473
>gi|297706883|ref|XP_002830254.1| PREDICTED: CDK5 regulatory subunit-associated protein 1-like,
partial [Pongo abelii]
Length = 229
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/232 (57%), Positives = 171/232 (73%), Gaps = 10/232 (4%)
Query: 126 RDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMV 185
R+ AE +W RL+ LK T R +S+ P +I +LGCMAERLK++IL+ +KMV
Sbjct: 8 REKAEQTIWNRLHQLKALK--------TRRPRSRVPLRIGILGCMAERLKEEILNREKMV 59
Query: 186 DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCN 245
D++ GPDAYRDLPRLL + GQ+ N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+
Sbjct: 60 DILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMRGCD 119
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
NMCS+CIVPFTRGRERSRP+ SI++EV +L ++G+KEVTLLGQNVNS+ D S E +
Sbjct: 120 NMCSYCIVPFTRGRERSRPIASILEEVKKLSEQGLKEVTLLGQNVNSFRDNS--EVQFNN 177
Query: 306 GANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDE 357
LS GF + K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE
Sbjct: 178 AVPTNLSRGFTTNYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDE 229
>gi|384265286|ref|YP_005420993.1| (Dimethylallyl)adenosine tRNA methylthiotransferase ymcB [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387898282|ref|YP_006328578.1| tRNA-i(6)A37 methylthiotransferase [Bacillus amyloliquefaciens Y2]
gi|380498639|emb|CCG49677.1| (Dimethylallyl)adenosine tRNA methylthiotransferase ymcB [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387172392|gb|AFJ61853.1| tRNA-i(6)A37 methylthiotransferase [Bacillus amyloliquefaciens Y2]
Length = 509
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 249/452 (55%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 171
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 172 IHRLPELLSEAYLSKEMVIEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y +
Sbjct: 231 PYTRGKERSRRPEEIIQEVRRLASEGYKEITLLGQNVNAY------------------GK 272
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
F+ M GL DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 273 DFDDMT----YGL--GDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+SA+L+ M R Y RE YL+LV KI+ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSAMLKMMARKYDRERYLELVGKIKAAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L + +E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNDLVKEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VLVEG +K PD L G +++ V F
Sbjct: 444 GRTVEVLVEGESKNNPDI-LAGYTEKSKLVNF 474
>gi|218780253|ref|YP_002431571.1| tRNA/rRNA methyltransferase SpoU [Desulfatibacillum alkenivorans
AK-01]
gi|218761637|gb|ACL04103.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfatibacillum
alkenivorans AK-01]
Length = 461
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 162/439 (36%), Positives = 246/439 (56%), Gaps = 50/439 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T GCQMNV D E + ++ GY E+ ++A+ + +NTCAIR AE KV+ L
Sbjct: 5 KLYIKTMGCQMNVYDSEAMARVLAPMGY-ELTAHKKDADCLLLNTCAIRAKAEQKVFSYL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
LK +P ++ V GC+A++ K+ D VD V GP A
Sbjct: 64 GRLTGLK-------------GNNPDLLIGVGGCVAQQEAKKVFDRAPHVDFVFGPHAINR 110
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISK-----NSVTAFVSVMRGCNNMCSFC 251
LP ++ + + G++ + L+ + +I + K + V+AFV++M GC+N C++C
Sbjct: 111 LPEIVAQAEQGKRHVAATEFLD-FFEEIKQPHLDKAGPEESGVSAFVTIMSGCDNYCTYC 169
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
+VP RGRE SR ++I+ EV+ L +GVKE+TLLGQNVNSY +
Sbjct: 170 VVPHVRGREMSRDSQAILAEVESLAAKGVKEITLLGQNVNSYGN---------------- 213
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCK 370
EGF S FA LL RL E + R R+T+ HPKD EL+ + P +CK
Sbjct: 214 KEGFGS----------FAGLL-RLVHEAEGVERIRFTTSHPKDLSQELIQAFAELPKLCK 262
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+G++ +L++M RGYTRE YL V+ +R+ P++ L++D I GF ETEE+ D
Sbjct: 263 HIHLPVQSGSNRILKKMNRGYTREDYLGKVRALREACPEIRLTTDIIAGFPSETEEDFQD 322
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
T+ L++ YD + F YS R A + + D + EEVK RRL ++++ E T + +
Sbjct: 323 TMDLIRRADYDSLFAFMYSDRPSAPAVK-FPDKLSEEVKSRRLAQVLKVSEEITRAKHAA 381
Query: 491 QVGTVQLVLVEGPNKKAPD 509
VG+ Q VLVEG + + P+
Sbjct: 382 MVGSKQQVLVEGRSVQNPE 400
>gi|293376437|ref|ZP_06622669.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Turicibacter sanguinis
PC909]
gi|325845044|ref|ZP_08168360.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Turicibacter sp. HGF1]
gi|292644946|gb|EFF63024.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Turicibacter sanguinis
PC909]
gi|325488920|gb|EGC91313.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Turicibacter sp. HGF1]
Length = 502
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 256/455 (56%), Gaps = 48/455 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
QG+ Y +TYGCQMN +D E ++ I + GY++ E A++I +NTCAIR+ AE++V
Sbjct: 57 GQGKKYLIQTYGCQMNEHDSEAIIGIAEELGYTKA-TTQEEADLIILNTCAIRENAENRV 115
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ L LKR +P I+ V GCM+ E++ ++I++ + VD+V G
Sbjct: 116 FGELGRLKRLKR-------------TNPDLILGVCGCMSQEEKVVNQIMEKYQYVDLVFG 162
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP + G++ + + S E + P R + S+ A+V++M GC+ C++
Sbjct: 163 THNIYRLPEYIHNALMGKERVIEVWSQEGEIVENMP-RTRQGSIKAWVNIMYGCDEFCTY 221
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
CIVP+TRG+ERSR E I+ E+ L +EG +EVTLLGQNVN+Y G +++
Sbjct: 222 CIVPYTRGKERSRLPEDIIAEIKHLAEEGYQEVTLLGQNVNAY------------GKDFK 269
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
E F DLLD L+ ++ P R R+T+ HP+DF + + + R N+
Sbjct: 270 DRE------------YTFGDLLDDLNKIDLP--RIRFTTSHPRDFDAKTIQTLAKRGNLM 315
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
++IHLP Q+GN+ VL+RM R YTRE YL LV+ +++ IP V +++D I GF GETEE+
Sbjct: 316 EHIHLPVQSGNNEVLKRMNRKYTREMYLQLVRDLKEAIPGVSITTDIIVGFPGETEEQFQ 375
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
DTL+L++ VGY+ A+ F +S RE T A R D+V E K+ RL L EA
Sbjct: 376 DTLSLVEEVGYEGAFTFIFSPREGTPAAR-MEDNVSEADKKDRLNRLNEAINRGFRNGNK 434
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K +T L G + V F
Sbjct: 435 RFEGQVVDVLVEGTSKN-DETVLAGYTRHNKLVNF 468
>gi|134299740|ref|YP_001113236.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Desulfotomaculum reducens MI-1]
gi|229890514|sp|A4J5Q8.1|MIAB_DESRM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|134052440|gb|ABO50411.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfotomaculum reducens
MI-1]
Length = 456
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 250/451 (55%), Gaps = 56/451 (12%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+++GCQMN D E + ++++ GY + E A++I +NTC +R+ AE KV F
Sbjct: 22 QSFGCQMNERDAESLAGMLEDLGYCPT-SAQEEADIILLNTCCVRETAESKV------FG 74
Query: 142 FLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDL 197
L R K VA P ++ V GCM+ E +I + VD++ G +L
Sbjct: 75 LLGRLRKLKVAK--------PDLILGVCGCMSQQEDAAKRIRRSFPFVDLIFGTHNIHEL 126
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
PR++ +V + + + + E+ + PV+ K+ + A+V++M GCNN C++CIVP+ R
Sbjct: 127 PRMIHQVQENHEAVLEVWATEKGITESIPVK-RKDKLKAWVTIMYGCNNFCTYCIVPYVR 185
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR E I+ E+ EL +EG KEVTLLGQNVNSY G ++
Sbjct: 186 GRERSRQPEDIIDEIKELVQEGYKEVTLLGQNVNSY------------GKDF-------- 225
Query: 318 MCKVKKMGLRFADLL----DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K RFADLL D LE R R+ + HP+DF L+ ++ VC++ H
Sbjct: 226 -----KNNYRFADLLMAIDDITGLE----RVRFMTSHPRDFDQRLIEVVASAKKVCEHYH 276
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LPAQ G++ VL+ M RGYTRE YL+L++KI++ +P+ +++D + GF GETEE+ +TL
Sbjct: 277 LPAQAGSNRVLKMMNRGYTREHYLELIRKIKERVPNASITADLMVGFPGETEEDFQETLD 336
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L+K V YD A+ F Y++R T A + ++ V EEVK R+ LIE + + + G
Sbjct: 337 LVKQVRYDSAFTFVYNIRSGTPAAK--LEQVSEEVKSERIQRLIELQNLISLENNQREEG 394
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG K PD L G++ V F
Sbjct: 395 RVLEVLVEGETKTNPDL-LAGRTRTNKLVVF 424
>gi|311030160|ref|ZP_07708250.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus sp.
m3-13]
Length = 514
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 251/450 (55%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY V +A+VI +NTCAIR+ AE+KV+ L
Sbjct: 69 KFYIRTYGCQMNEHDTEVMAGIFLALGYEATYTV-NDADVILLNTCAIRENAENKVFGEL 127
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK+ S+ I V GCM+ E + +KIL + VD++ G
Sbjct: 128 GHLKTLKK------------SRPGLLIGVCGCMSQEESVVNKILKTYQQVDMIFGTHNIH 175
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L++ ++ + + S E + P + K + A+V++M GC+ C++CIVP+
Sbjct: 176 RLPNILKDAYMSKEMVIEVWSKEGDVIENLP-KNRKGEIKAWVNIMYGCDKFCTYCIVPY 234
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++EV L +G KE+TLLGQNVN+Y + F
Sbjct: 235 TRGKERSRRPEDIIQEVRHLAAQGYKEITLLGQNVNAY------------------GKDF 276
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K GL DL+D + ++ P R R+T+ HP+DF D L+ ++ N+ +IHL
Sbjct: 277 EDI----KYGL--GDLMDEIRKIDIP--RIRFTTSHPRDFDDRLVEVLAKGGNLLDHIHL 328
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S +L+ M R Y RE YL+LV KI+ +P+ L++D I GF ETEE+ +T++L
Sbjct: 329 PVQSGSSEILKLMARKYDRERYLELVGKIKAAMPNASLTTDIIVGFPNETEEQFEETMSL 388
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A + VD+VP EVK+ RL L E + + G
Sbjct: 389 YREVEFDTAYTFIYSPREGTPAAK-MVDNVPLEVKKDRLQRLNALVNEISAKKLKEYEGQ 447
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +KK P+ L G +D+ V F
Sbjct: 448 IVEVLVEGESKKNPEV-LAGYTDKSKLVNF 476
>gi|395764535|ref|ZP_10445161.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella sp. DB5-6]
gi|395414362|gb|EJF80805.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella sp. DB5-6]
Length = 458
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 241/444 (54%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P++A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSQGYI-TTQTPDDADLILVNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E R+ K P + V GC+A+ +IL VD++ GP Y L
Sbjct: 75 GRLRVIRQE--------RAPDK-PLMVGVTGCVAQAEGSEILRRAPTVDLIIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K I T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PDLLEKAKQGKKVIETDYAVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRPVE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 186 YTRGAEISRPVEQITEEARQLIEAGVKEITLLGQNVNGWHGQSAH------GKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D + L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDESLIAAHRDLDILMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSIHYLQLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETIKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K V Y AY F YS R T +N+VD E VK RL L E S+V
Sbjct: 343 IKQVQYSSAYSFKYSPRPGTVGATMKNHVD---ETVKDARLQHLQVLLLEQQNAFLRSKV 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G V VL+E + + ++VG+S
Sbjct: 400 GEVTDVLIEKAGRYS--GQMVGRS 421
>gi|188589964|ref|YP_001921085.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum E3 str. Alaska E43]
gi|229890484|sp|B2V276.1|MIAB_CLOBA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|188500245|gb|ACD53381.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum E3
str. Alaska E43]
Length = 456
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 244/453 (53%), Gaps = 45/453 (9%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
Q + +T+GCQMN D E + ++K+ GY E N E + VIF NTC +R+ AE+KV+
Sbjct: 16 GQEFFFIQTFGCQMNEEDSEKLSGMLKSQGYEETENRDEASIVIF-NTCCVRENAENKVF 74
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGP 191
L LK + +KN P I+ L GCM ++ + D+IL VD++ G
Sbjct: 75 GNLGR---LKNQKEKN----------PNLIIALCGCMMQQKGMADEILSRFPYVDIIFGT 121
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
P L V + + E + P+ K++V AFV++M GCNN C++C
Sbjct: 122 HNAYKFPEYLHRVQVEGVQVKEIFDKETEIVEGVPID-RKSNVKAFVTIMYGCNNFCTYC 180
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
+VP+ RGRERSR E I E+ EL G KE+TLLGQNVNSY G+E+E+
Sbjct: 181 VVPYVRGRERSRRPEDIENEIKELVSNGYKEITLLGQNVNSYG--KGLEEEI-------- 230
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
FA LL R++ R R+ + HPKD +++Y +RD +C+
Sbjct: 231 ---------------TFAQLLRRINEIDGLERLRFMTSHPKDLTLDVVYAIRDCDKLCEQ 275
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLP Q+G++ +L++M R Y +E YL+L +KIR+ IPDV S+D I GF GETEE+ +T
Sbjct: 276 IHLPVQSGSNEILQKMNRHYNKEQYLELAKKIREEIPDVTFSTDIIVGFPGETEEDFEET 335
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
+ L+K V YD A+ F YS R T A + D +P++VK R L+ A E +
Sbjct: 336 INLVKEVRYDAAFTFIYSRRNHTPADK-MEDQIPDDVKHDRFNRLVAAVNEGIVVGNKAA 394
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G + VLVEG +K + +L G++ V F
Sbjct: 395 EGKIYEVLVEGTSKNN-ENKLTGRTRNAKLVNF 426
>gi|376261289|ref|YP_005148009.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Clostridium sp. BNL1100]
gi|373945283|gb|AEY66204.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Clostridium sp. BNL1100]
Length = 481
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 244/445 (54%), Gaps = 43/445 (9%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ET+GCQMN ND E + ++ GYSE + +++++I NTC +R+ AE KV+ L
Sbjct: 46 ETFGCQMNENDSERLSGMLSEMGYSEC-SERKDSDLIIFNTCCVRENAEQKVFGHLGALK 104
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK E N+ I + GCM ++ + + I K VD++ G P
Sbjct: 105 KLK-ETNPNLV-----------IAICGCMMQQKEVVEHIKKTYKHVDIIFGTHNLYKFPE 152
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL + + + + A+ P+ K+++ A+V+VM GCNN CS+CIVP+ RGR
Sbjct: 153 LLNTAITTKSTVIDVWDSTGSIAENMPIS-RKDNIKAWVTVMYGCNNFCSYCIVPYVRGR 211
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR +E I EV++L +G KE+TLLGQNVNSY K++E
Sbjct: 212 ERSRSLEEIKNEVEKLAVDGCKEITLLGQNVNSYG------KDLEGD------------- 252
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
L FA LL L+ R R+ + HPKD DEL+Y MRD VC+++HLP Q G
Sbjct: 253 ------LTFAGLLRELNKIKGIERIRFMTSHPKDLSDELIYAMRDCEKVCEHLHLPVQAG 306
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S VL+ M R Y +E YL+L++K++ IP + LS+D I GF GETEE+ +TL ++
Sbjct: 307 SSKVLDEMNRKYNKEQYLELIEKVKSNIPGIALSTDIIVGFPGETEEDFNETLDVVAKAR 366
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+DMAY F YS R T A +N + VPE VK++R +L+E + + + D +G VL
Sbjct: 367 FDMAYTFLYSKRTGTPAAKN-PEQVPESVKKQRFDKLLELQNKISKEINDELLGKEMEVL 425
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +K + T G++ V F
Sbjct: 426 VEGLSKSSKTT-YTGRTRENKIVNF 449
>gi|394994048|ref|ZP_10386784.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus sp.
916]
gi|393805127|gb|EJD66510.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus sp.
916]
Length = 509
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 248/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 171
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 172 IHRLPELLSEAYLSKEMVIEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y G ++
Sbjct: 231 PYTRGKERSRRPEEIIQEVRRLASEGYKEITLLGQNVNAY------------GKDF---- 274
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ M DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 275 --------EDMTYGLGDLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+SA+L+ M R Y RE YL+LV KI+ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSAMLKMMARKYDRERYLELVGKIKAAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L + +E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNDLVKEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VLVEG +K PD L G +++ V F
Sbjct: 444 GRTVEVLVEGESKNNPDI-LAGYTEKSKLVNF 474
>gi|375362347|ref|YP_005130386.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|421731627|ref|ZP_16170750.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|451346926|ref|YP_007445557.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
amyloliquefaciens IT-45]
gi|371568341|emb|CCF05191.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|407073840|gb|EKE46830.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|449850684|gb|AGF27676.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
amyloliquefaciens IT-45]
Length = 509
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 248/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 171
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 172 IHRLPELLSEAYLSKEMVIEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y G ++
Sbjct: 231 PYTRGKERSRRPEEIIQEVRRLASEGYKEITLLGQNVNAY------------GKDF---- 274
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ M DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 275 --------EDMTYGLGDLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+SA+L+ M R Y RE YL+LV KI+ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSAMLKMMARKYDRERYLELVGKIKAAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L + +E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNDLVKEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VLVEG +K PD L G +++ V F
Sbjct: 444 GRTVEVLVEGESKNNPDI-LAGYTEKSKLVNF 474
>gi|152976138|ref|YP_001375655.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cytotoxicus NVH 391-98]
gi|229890423|sp|A7GRA2.1|MIAB_BACCN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|152024890|gb|ABS22660.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cytotoxicus NVH
391-98]
Length = 509
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E+A+VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFTT-EDADVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LK+ K+P ++ V GCM+ E + +KI+ + VD+V G
Sbjct: 126 GHLKPLKQ-------------KNPDLLIGVCGCMSQEESVVNKIMQKHQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + + + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKATVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I+KEV L G KE+TLLGQNVN+Y +
Sbjct: 232 YTRGKERSRRPEDIIKEVRHLAANGYKEITLLGQNVNAY------------------GKD 273
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F+ + + GL DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 274 FDDL----EYGL--GDLMDELR-KIDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE YL+LV+KI++ IP+V L++D I GF ET+E+ +TL+L
Sbjct: 327 PVQSGSTDMLKIMARKYTREQYLELVRKIKKTIPNVVLTTDIIVGFPNETDEQFEETLSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D A+ F YS RE T A + D++P EVK+ RL L E E + + G
Sbjct: 387 YREVEFDSAFTFIYSPREGTPAAK-MKDNIPMEVKKERLQRLNELVNEFSAKKNKKYEGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K PD L G + V F
Sbjct: 446 IVEVLVDGESKNNPDV-LAGYTRTNKLVNF 474
>gi|124265725|ref|YP_001019729.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Methylibium
petroleiphilum PM1]
gi|229890616|sp|A2SD55.1|MIAB_METPP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|124258500|gb|ABM93494.1| bifunctional enzyme involved in thiolation and methylation of tRNA
[Methylibium petroleiphilum PM1]
Length = 457
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 163/453 (35%), Positives = 247/453 (54%), Gaps = 47/453 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNA-GYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ +T+GCQMN D + + +++ A GY +V E A++I NTC++R+ A+ KV+
Sbjct: 9 KVFIKTFGCQMNEYDSDKMADVLRAAEGYEPTTDV-EQADLILFNTCSVREKAQEKVFSD 67
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK K I V GC+A + +++ VDVV GP
Sbjct: 68 LGRVKHLKARGVK--------------IGVGGCVASQEGAALIERAPYVDVVFGPQTLHR 113
Query: 197 LPRLLEEVDYGQK-GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L D Q+ ++ E + + P R+ + TAFVS+M GC+ CS+C+VP+
Sbjct: 114 LPEMLARRDAQQRPQVDISFPEIEKFDHLPPARV--DGATAFVSIMEGCSKYCSYCVVPY 171
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP + ++ EV L +GVKEVTLLGQNVN Y G E+
Sbjct: 172 TRGEEVSRPFDDVLTEVASLADQGVKEVTLLGQNVNGYRGRMGDTAEIA----------- 220
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FA LL+ ++ E P + R RYT+ HP +F L+ + P + ++HL
Sbjct: 221 -----------DFALLLEYVA-EIPGIARIRYTTSHPNEFSQRLIDVYARVPQLVNHLHL 268
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT Y ++K+R I PD+ LS+DFI GF GET+++HA T+ L
Sbjct: 269 PVQHGSDRILSAMKRGYTSLEYKSSIRKLRAIRPDISLSTDFIVGFPGETDDDHARTMKL 328
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VG+D ++ F YS R T A + DD P E+K RL ++ EA + + S+VGT
Sbjct: 329 IEDVGFDHSFSFIYSARPGTPAAALH-DDAPRELKLARLQQVQEAIEANGRRIGQSRVGT 387
Query: 495 VQLVLVEGPNKKA---PDTELVGKSDRGHRVAF 524
VQ +LVEGP+++ EL+G+++ V F
Sbjct: 388 VQRILVEGPSRRPELNAGHELMGRTECNRIVNF 420
>gi|421588190|ref|ZP_16033506.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium sp.
Pop5]
gi|403707160|gb|EJZ22237.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium sp.
Pop5]
Length = 469
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 250/461 (54%), Gaps = 47/461 (10%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
A EVS GS +++ +TYGCQMNV D + + GY ++ E A+++ +N
Sbjct: 10 APEVSLRDGSNSR---KVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDL-EEADLVLLN 65
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC IR+ A KV+ L +K KK A GR I V GC+A+ ++IL
Sbjct: 66 TCHIREKAAEKVYSALGRLREMK---KKKAADGREM-----MIGVAGCVAQAEGEEILRR 117
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSVTAF 237
VDVV GP Y LP L + G++ ++T ++E+ + + P+ +I VTAF
Sbjct: 118 APAVDVVIGPQTYHRLPEALRQAKQGRRVVDTEYAIEDKFEHL-PIAESRKIRARGVTAF 176
Query: 238 VSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTS 297
++V GC+ C+FC+VP+TRG E SRPV IV+E ++L + GV+E+TLLGQNVN+++
Sbjct: 177 LTVQEGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAEKLVEGGVREITLLGQNVNAWHGAG 236
Query: 298 GMEKEVEPGAN-WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFP 355
PG W L DLL RL+ E P + R RYT+ HP+D
Sbjct: 237 -------PGGEAWSL-----------------GDLLYRLA-EIPGLARLRYTTSHPRDMD 271
Query: 356 DELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSD 415
D L+ RD + Y+HLP Q+G+ +L+ M R +T YL L+++IR + PD+ LS D
Sbjct: 272 DRLIDAHRDLRALMPYLHLPVQSGSDRILKAMNRRHTAAEYLTLIERIRTVRPDIALSGD 331
Query: 416 FICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTE 475
FI GF GET+E+ ADTL L++ V Y A+ F YS R T D VPEE+K RL
Sbjct: 332 FITGFPGETDEDFADTLRLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLER 390
Query: 476 LIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
L + + +S +G +L+E P + +L+G+S
Sbjct: 391 LQALLLKQQQEFAESCIGKEIDLLLEKPGRMP--GQLIGRS 429
>gi|154686118|ref|YP_001421279.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
amyloliquefaciens FZB42]
gi|429505255|ref|YP_007186439.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|229890448|sp|A7Z4X2.1|MIAB_BACA2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|154351969|gb|ABS74048.1| YmcB [Bacillus amyloliquefaciens FZB42]
gi|429486845|gb|AFZ90769.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
Length = 509
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 248/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 171
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 172 IHRLPELLSEAYLSKEMVIEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y G ++
Sbjct: 231 PYTRGKERSRRPEEIIQEVRRLASEGYKEITLLGQNVNAY------------GKDF---- 274
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ M DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 275 --------EDMTYGLGDLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+SA+L+ M R Y RE YL+LV KI+ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSAMLKMMARKYDRERYLELVGKIKAAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L + +E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNDLVKEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VLVEG +K PD L G +++ V F
Sbjct: 444 GRTVEVLVEGESKNNPDI-LAGYTEKSKLVNF 474
>gi|16078764|ref|NP_389583.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221309576|ref|ZP_03591423.1| hypothetical protein Bsubs1_09356 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313900|ref|ZP_03595705.1| hypothetical protein BsubsN3_09287 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318823|ref|ZP_03600117.1| hypothetical protein BsubsJ_09216 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323095|ref|ZP_03604389.1| hypothetical protein BsubsS_09327 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|452913965|ref|ZP_21962592.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus subtilis MB73/2]
gi|6226482|sp|O31778.1|MIAB_BACSU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|2634073|emb|CAB13574.1| enzyme for ms(2)i(6)A formation for tRNA modification [Bacillus
subtilis subsp. subtilis str. 168]
gi|407959107|dbj|BAM52347.1| (dimethylallyl)adenosine tRNAmethylthiotransferase [Synechocystis
sp. PCC 6803]
gi|407964684|dbj|BAM57923.1| (dimethylallyl)adenosine tRNAmethylthiotransferase [Bacillus
subtilis BEST7003]
gi|452116385|gb|EME06780.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus subtilis MB73/2]
Length = 509
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 248/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 171
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 172 IHRLPELLSEAYLSKEMVVEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y G ++
Sbjct: 231 PYTRGKERSRRPEDIIQEVRRLASEGYKEITLLGQNVNAY------------GKDF---- 274
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ M DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 275 --------EDMTYGLGDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S VL+ M R Y RE Y++LV+KI++ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSEVLKLMARKYDRERYMELVRKIKEAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNALVNEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K PD L G +++ V F
Sbjct: 444 GKVVEVLVEGESKNNPDI-LAGYTEKSKLVNF 474
>gi|421557858|ref|ZP_16003755.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
80179]
gi|402333577|gb|EJU68879.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Neisseria meningitidis
80179]
Length = 442
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 245/438 (55%), Gaps = 48/438 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + +L+++ + G E + + A++I NTC++R+ A+ KV+
Sbjct: 3 KVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK K+P I+ V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVRPLK-------------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
LP+++ VD G++ + +S E + + P R+ + AFVS+M GC+ CSFC+
Sbjct: 110 RLPKMI--VDKETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCV 165
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VP+TRG E SRP+ ++ E+ L ++GVKE+ LLGQNVN+Y E++ G
Sbjct: 166 VPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRG------EMDDG------ 213
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+C FA LL R+ E P + R R+T+ HP++F D ++ RD P + +
Sbjct: 214 ----EICD-------FATLL-RIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSH 261
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ VL M+RGYT Y +++K+R I PD+ LSSDFI GF ETE E T
Sbjct: 262 LHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPSETEREFEQT 321
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L L+K + +D++++F YS R T A N DD P E K RRL L E T + +
Sbjct: 322 LKLVKDIAFDLSFVFIYSPRPGTPAA-NLHDDTPHEEKVRRLEALNEVIEAETARINQTM 380
Query: 492 VGTVQLVLVEGPNKKAPD 509
+GTVQ LVEG +KK PD
Sbjct: 381 IGTVQRCLVEGISKKDPD 398
>gi|440225355|ref|YP_007332446.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rhizobium tropici CIAT
899]
gi|440036866|gb|AGB69900.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rhizobium tropici CIAT
899]
Length = 470
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 247/476 (51%), Gaps = 46/476 (9%)
Query: 45 IAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAG 104
+ + SLT P D A ++ S GS +++ +TYGCQMNV D + + G
Sbjct: 1 MTKDSLTLDAPATD---ALQLGSRDGSNSR---KVFIKTYGCQMNVYDSTRMSDALARDG 54
Query: 105 YSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKI 164
Y ++ E A+++ +NTC IR+ A KV+ L +K K+ A GR I
Sbjct: 55 YEPTEDM-EEADLVLLNTCHIREKAAEKVYSALGRLREMK---KRKAADGREM-----MI 105
Query: 165 VVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADI 224
V GC+A+ ++IL VDVV GP Y LP L GQ+ ++T ++E+ + +
Sbjct: 106 GVTGCVAQAEGEEILRRAPAVDVVIGPQTYHRLPDALRRAKEGQRVVDTEYAIEDKFEHL 165
Query: 225 ---SPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVK 281
+I VTAF++V GC+ C+FC+VP+TRG E SRPV IV+E ++L GV+
Sbjct: 166 PIAEEAKIRARGVTAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAEKLVDGGVR 225
Query: 282 EVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPE 341
E+TLLGQNVN+++ G W L DLL RL+ E P
Sbjct: 226 EITLLGQNVNAWHGIG------PKGEAWSL-----------------GDLLYRLA-EIPG 261
Query: 342 M-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLV 400
+ R RYT+ HP+D D L+ RD + Y+HLP Q G+ +L+ M R +T YL L+
Sbjct: 262 LARLRYTTSHPRDMDDRLIGAHRDLRTLMPYLHLPVQAGSDRILKAMNRRHTAAEYLTLI 321
Query: 401 QKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNY 460
+KIR PD+ LS DFI GF GET+++ DTL L++ V Y A+ F YS R T
Sbjct: 322 EKIRLARPDIALSGDFIVGFPGETDQDFEDTLKLIEGVNYAQAFSFKYSTRPGTPGA-EL 380
Query: 461 VDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
D VPEEVK RL L ++ VG +L+E P + +L+G+S
Sbjct: 381 KDQVPEEVKTERLERLQALLLRQQHAFAEACVGKTVDILLEKPGRMP--GQLIGRS 434
>gi|321315467|ref|YP_004207754.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
subtilis BSn5]
gi|386758424|ref|YP_006231640.1| tRNA-i(6)A37 methylthiotransferase [Bacillus sp. JS]
gi|430758878|ref|YP_007209599.1| hypothetical protein A7A1_3386 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|320021741|gb|ADV96727.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
subtilis BSn5]
gi|384931706|gb|AFI28384.1| tRNA-i(6)A37 methylthiotransferase [Bacillus sp. JS]
gi|430023398|gb|AGA24004.1| Hypothetical protein YmcB [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 509
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 248/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 171
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 172 IHRLPELLSEAYLSKEMVVEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y G ++
Sbjct: 231 PYTRGKERSRRPEDIIQEVRRLASEGYKEITLLGQNVNAY------------GKDF---- 274
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ M DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 275 --------EDMTYGLGDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S VL+ M R Y RE Y++LV+KI++ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSEVLKLMARKYDRERYMELVRKIKEAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNALVNEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K PD L G +++ V F
Sbjct: 444 GKVVEVLVEGESKNNPDI-LAGYTEKSKLVNF 474
>gi|423488895|ref|ZP_17465577.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BtB2-4]
gi|423494620|ref|ZP_17471264.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus CER057]
gi|423498589|ref|ZP_17475206.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus CER074]
gi|401151681|gb|EJQ59127.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus CER057]
gi|401159247|gb|EJQ66632.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus CER074]
gi|402433250|gb|EJV65304.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BtB2-4]
Length = 509
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 259/453 (57%), Gaps = 51/453 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E A+VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFST-EEADVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P I+ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLIIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I+KE+ L G KE+TLLGQNVN+Y +
Sbjct: 232 YTRGKERSRRPEDIIKEIRHLAANGYKEITLLGQNVNAY------------------GKD 273
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F + + GL DL+D L + R R+T+ HP+DF + L+ ++ N+ ++IHL
Sbjct: 274 FEDI----QYGL--GDLMDELR-KIDIARIRFTTSHPRDFDNHLIDVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKETIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQ---RRLTELIEAFRESTGQCYDSQ 491
+ VG+D A+ F YS RE T A + D+VP EVK+ +RL L+ + + +CY
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MQDNVPMEVKKERLQRLNTLVNEYAVNKNKCY--- 442
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G + VLVEG +K P+ L G + V F
Sbjct: 443 IGQIVEVLVEGESKNNPEV-LAGYTRTNKLVNF 474
>gi|333897073|ref|YP_004470947.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333112338|gb|AEF17275.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 473
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 166/457 (36%), Positives = 257/457 (56%), Gaps = 59/457 (12%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ + ETYGCQMNV+D E + ++ GY N+ E+A+VI NTC +R +AE +++ R+
Sbjct: 34 KFHIETYGCQMNVHDSEKLAGMLTEMGYQHTDNL-EDADVILFNTCCVRQHAEIRIFGRV 92
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK---MVDVVCGPDAY 194
+ LK+ K N+ G + GCM + K+ + K +D+V G
Sbjct: 93 SQLKELKQR-KPNIILG-----------ICGCMMQE-KEVVAAIRKDYPYIDMVFGTHNL 139
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADIS------PVRISKNSVTAFVSVMRGCNNMC 248
P +L+E +N+ ++ + + D S P+R ++ + A+V+++ GCNN C
Sbjct: 140 FKFPEILQE------ALNSDTTVIDVWDDNSNIVEDIPIRRAE-GLKAWVNIIYGCNNFC 192
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY-NDTSGMEKEVEPGA 307
++CIVP+ RGRERSR + I+ E+ L EG KE+TLLGQNVNSY ND S
Sbjct: 193 TYCIVPYVRGRERSREPKDIIDEIKSLADEGFKEITLLGQNVNSYGNDLS---------- 242
Query: 308 NWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPN 367
+ FADLL ++ R R+ + HPKD D+L++ +RD
Sbjct: 243 ----------------QKVDFADLLYMINNINGIERIRFMTSHPKDISDKLIFAIRDLDK 286
Query: 368 VCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEE 427
VC+++HLP Q+G++ +LE+M R YTRE YL++++K+R IPD+ +++D I GF GET+E+
Sbjct: 287 VCEHLHLPVQSGSNRILEKMNRKYTRERYLEIIEKLRDNIPDIAITTDIIVGFPGETDED 346
Query: 428 HADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQC 487
DTL L+K V YD AY F YS R+ T A + D V E++K +RL ELI+ + +
Sbjct: 347 FQDTLDLVKKVKYDSAYTFIYSKRKGTVAEK-MPDQVDEDIKHKRLEELIKLQNSISIEK 405
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G + VLVEG +K+ D +L G++ V F
Sbjct: 406 NNEMNGKIVEVLVEGTSKRDSD-KLTGRTRTNKIVHF 441
>gi|395782565|ref|ZP_10462951.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella rattimassiliensis 15908]
gi|395417302|gb|EJF83641.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella rattimassiliensis 15908]
Length = 462
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 237/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P++A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSQGYV-TTQTPDDADLILVNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E + P + V GC+A+ +IL VD+V GP Y L
Sbjct: 75 GRLRIMRQERTPDT---------PLMVGVTGCVAQAEGSEILRRAPTVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LE+ G+K I T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PEFLEKAKQGKKIIETDYAVEDKFAHLPPHNKRAVQKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 186 YTRGAEISRSVEQITEEARQLIEAGVKEITLLGQNVNGWHGQS------TDGKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDMLMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSSHYLHLIEKIRDARPDIAFSGDFIVGFPGETDEDFKETIKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
++ V Y AY F YS R T RN+VD E +K RL L E S++
Sbjct: 343 IQQVQYSSAYSFKYSPRPGTVGATMRNHVD---ESIKDARLQHLQVLLLEQQNAFLRSKI 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E P + + ++VG+S
Sbjct: 400 GQKINVLIEKPGRHS--GQMVGRS 421
>gi|332297280|ref|YP_004439202.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Treponema
brennaborense DSM 12168]
gi|332180383|gb|AEE16071.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Treponema
brennaborense DSM 12168]
Length = 470
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 252/455 (55%), Gaps = 26/455 (5%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGCQMN + + ++ G++ + PE+A++ INTC++R AE++++ RL +
Sbjct: 4 FFETYGCQMNKAESASLEQLLIARGWT-ASDTPESADMAIINTCSVRATAENRIFGRLGW 62
Query: 140 FWFLK--REWKKNV-------ATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVC 189
F LK R K+ A S PP +VV GCMAERL D + ++D V
Sbjct: 63 FSALKAVRSGSKDAKNASFPDAAREFASGRPPLTLVVTGCMAERLLDSLQKQYPVIDYVV 122
Query: 190 GPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
G + +++ V+ Q+ ++ E Y+ +PV + TAFV +M GCNN C+
Sbjct: 123 GNFQKQHFQDIIDAVE--QQRAPFVVDEEPVYS-FAPVSWEPGAFTAFVPIMHGCNNFCT 179
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
+CIVP+ RGRE SR I+ E+D+L V+E+TLLGQNVNSY + E GA
Sbjct: 180 YCIVPYVRGREVSRSPADILSELDQLSAHNVREITLLGQNVNSYR----WDCNAETGA-- 233
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
+E +S + AD L + + P R+ S HPKD D L+ ++ P +C
Sbjct: 234 --AETGDSAVDFPALVQLIADHLRKTA--SPIGWVRFMSSHPKDLSDRLIDVIAREPVLC 289
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
++IHLP Q G+S VL RM R YTRE YLDLV +IR +PD L++D + GF GE + +
Sbjct: 290 RHIHLPVQHGSSDVLRRMNRRYTREQYLDLVSRIRTKLPDASLTTDILIGFPGENDADFE 349
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
T++LM++V Y AYM+ Y+ RE T A Y +P E K+ RL +I+ E T
Sbjct: 350 QTVSLMESVRYQAAYMYYYNPREGTPAA-EYDGQIPLETKKSRLKRIIDMQLEITRAETA 408
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++G+ VL E ++ P EL+GK+++ RV F
Sbjct: 409 KRLGSTVKVLAESVSRDNPG-ELLGKTEQDERVVF 442
>gi|423598916|ref|ZP_17574916.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD078]
gi|401237186|gb|EJR43643.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD078]
Length = 509
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 259/453 (57%), Gaps = 51/453 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E A+VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFST-EEADVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P I+ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLIIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I+KE+ L G KE+TLLGQNVN+Y +
Sbjct: 232 YTRGKERSRRPEDIIKEIRHLAANGYKEITLLGQNVNAY------------------GKD 273
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F + + GL DL+D L + R R+T+ HP+DF + L+ ++ N+ ++IHL
Sbjct: 274 FEDI----QYGL--GDLMDELR-KIDIARIRFTTSHPRDFDNHLIDVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKETIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQ---RRLTELIEAFRESTGQCYDSQ 491
+ VG+D A+ F YS RE T A + D+VP EVK+ +RL L+ + + +CY
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MQDNVPMEVKKERLQRLNTLVNEYAVNKNKCY--- 442
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G + VLVEG +K P+ L G + V F
Sbjct: 443 IGQIVEVLVEGESKNNPEV-LAGYTRTNKLVNF 474
>gi|297584113|ref|YP_003699893.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus selenitireducens
MLS10]
gi|297142570|gb|ADH99327.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus selenitireducens
MLS10]
Length = 516
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 245/446 (54%), Gaps = 47/446 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + I+ G+ +N E A+VI +NTCAIR+ AE+KV+ +
Sbjct: 78 TYGCQMNEHDSENMAGILLEMGFESTVNQDE-ADVILLNTCAIRENAENKVFGEIGNLKV 136
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
+KRE +P IV V GCM+ E + ++IL + VD++ G LP
Sbjct: 137 MKRE-------------NPGLIVGVCGCMSQEESVVNRILQKHQHVDLIFGTHNIHRLPE 183
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L++ + ++ I + S E + P R K +V++M GC+ C++CIVPFTRG+
Sbjct: 184 LIKNAIFSKEMIVEVWSQEGDIIENMP-RARKGQFQGWVNIMYGCDKFCTYCIVPFTRGK 242
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E +++EV L + G KE+TLLGQNVN+Y G + S
Sbjct: 243 ERSRRPEDVIEEVRHLARNGYKEITLLGQNVNAY------------GKDLLDS------- 283
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
R ADLLD + + P R R+T+ HP DF DEL+ ++ N+ ++IHLP Q+
Sbjct: 284 -----SYRLADLLDDIRDIGIP--RVRFTTSHPWDFDDELIDVIAKGGNMMEHIHLPVQS 336
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
GN+ VL+ M R YTRE Y+ L KI++ IP L++D I G+ ETEE+ DTL+L+K +
Sbjct: 337 GNNDVLKIMNRKYTREEYVALADKIKEKIPHATLTTDIIVGYPNETEEQFQDTLSLVKEM 396
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
+D AY + YS RE T A DDVP+EVK+ RL L E + + V
Sbjct: 397 AFDAAYTYVYSAREGTPAAA-MEDDVPKEVKKDRLQRLNEVVNRHSAMSNERMRDRTVEV 455
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +KK PD L+G++ V F
Sbjct: 456 LVEGESKKNPDV-LMGRTRTNKLVNF 480
>gi|125973301|ref|YP_001037211.1| RNA modification protein [Clostridium thermocellum ATCC 27405]
gi|256003782|ref|ZP_05428770.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
2360]
gi|281417504|ref|ZP_06248524.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
JW20]
gi|385778786|ref|YP_005687951.1| MiaB family RNA modification protein [Clostridium thermocellum DSM
1313]
gi|419723197|ref|ZP_14250332.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Clostridium thermocellum AD2]
gi|419724899|ref|ZP_14251954.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Clostridium thermocellum YS]
gi|229890498|sp|A3DDI9.1|MIAB_CLOTH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|125713526|gb|ABN52018.1| RNA modification enzyme, MiaB family [Clostridium thermocellum ATCC
27405]
gi|255992343|gb|EEU02437.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
2360]
gi|281408906|gb|EFB39164.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
JW20]
gi|316940466|gb|ADU74500.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
1313]
gi|380771519|gb|EIC05384.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Clostridium thermocellum YS]
gi|380780964|gb|EIC10627.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Clostridium thermocellum AD2]
Length = 480
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 247/444 (55%), Gaps = 46/444 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMN +D E + ++ GY+E NV E+ VI+ NTC +R+ AE KV+ L
Sbjct: 49 TFGCQMNEHDSEKLAGMLAEMGYAETDNVNESDLVIY-NTCCVRENAELKVYGHLGMLKP 107
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAER--LKDKILDADKMVDVVCGPDAYRDLPRL 200
LK + K I V GCM ++ + + I VD++ G P L
Sbjct: 108 LKNQ------------KPDLVIAVCGCMMQQPEVVEHIKKTYSHVDLIFGTHNLYKFPEL 155
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
L Q + + + A+ + K+ V A+V+VM GCNN C++CIVP+ RGRE
Sbjct: 156 LYSAMDSQTTVVDVWDCDGQIAENVAIE-RKDGVKAWVTVMYGCNNFCTYCIVPYVRGRE 214
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
RSR ++ I++EV L ++G KE+TLLGQNVNSY G
Sbjct: 215 RSRSMDDILEEVRMLGRQGFKEITLLGQNVNSYGKDIGD--------------------- 253
Query: 321 VKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
G FA+L+ ++ + P + R R+T+ HPKD D+L+Y MRD VC+++HLP Q G
Sbjct: 254 ----GTSFAELIREVN-KIPGIERIRFTTSHPKDLSDDLIYAMRDCEKVCEHLHLPFQAG 308
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L+ M R YT+E Y++LV KI++ IPD+ L++D I GF GETEE+ +DTL +++ V
Sbjct: 309 STRILKLMNRKYTKEDYINLVAKIKENIPDIALTTDIIVGFPGETEEDFSDTLDILEKVR 368
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D AY F YS R T A + D VPEEVK+ R L+E + + D+ +G V VL
Sbjct: 369 FDNAYTFLYSKRTGTPAAK-MEDQVPEEVKKERFQRLLETQNRISKEINDTFLGKVVEVL 427
Query: 500 VEGPNKKAPDTELVGKSDRGHRVA 523
VEG + K D G++ RG++V
Sbjct: 428 VEGVS-KTNDKIFTGRT-RGNKVV 449
>gi|153954198|ref|YP_001394963.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
kluyveri DSM 555]
gi|146347079|gb|EDK33615.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 444
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 244/445 (54%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN D E + I+K GY N +A++I NTC +R+ AE KV+ L
Sbjct: 14 TYGCQMNEEDSEKLSGILKKMGYKRAEN-KLSADLIIFNTCCVRENAELKVYGNLGALKK 72
Query: 143 LKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK++ P I+ L GCM ++ + +K++ VD++ G P
Sbjct: 73 LKKQ-------------RPELIIALCGCMMQQKGMAEKVIKKFPFVDIIFGTHNAYKFPE 119
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L V++ + + E+ + P+ ++SV AFV++M GCNN C++CIVP+ RGR
Sbjct: 120 YLNRVNHQNVSVIEIQDKEDGIVEGVPID-RESSVKAFVTIMYGCNNFCAYCIVPYVRGR 178
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I E+ EL +G KEVTLLGQNVNSY K + P N
Sbjct: 179 ERSRKPEDIENEIKELVSKGYKEVTLLGQNVNSYG------KNLNPRVN----------- 221
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
F++LL R++ R R+ + HPKD D+++ ++ + +C++IHLP Q+G
Sbjct: 222 --------FSELLRRINNVDGIERIRFMTSHPKDLTDDVIDVISECDKICEHIHLPVQSG 273
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L++M R Y++E YL LV +I+ IPD +++D I GF GETEE+ +TL L + V
Sbjct: 274 STRILKKMNRNYSKEQYLALVSEIKHKIPDASITTDIIVGFPGETEEDFEETLNLAEGVE 333
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D A+ F YS RE T A++ + + ++VK R L+E +S + G ++ VL
Sbjct: 334 FDSAFTFIYSKREGTPAYK-IEEQISDDVKHERFNRLVEVINKSAAKKNKVYEGRIEEVL 392
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEGP+K T+L+G++ G V F
Sbjct: 393 VEGPSKN-DSTKLMGRTRTGKLVNF 416
>gi|452855648|ref|YP_007497331.1| enzyme for ms(2)i(6)A formation for tRNA modification [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452079908|emb|CCP21666.1| enzyme for ms(2)i(6)A formation for tRNA modification [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 509
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 248/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 171
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 172 IHRLPELLSEAYLSKEMVIEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y G ++
Sbjct: 231 PYTRGKERSRRPEEIIQEVRRLASEGYKEITLLGQNVNAY------------GKDF---- 274
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ M DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 275 --------EDMTYGLGDLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+SA+L+ M R Y RE YL+LV KI+ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSAMLKMMARKYDRERYLELVGKIKAAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L + +E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNDLVKEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VLVEG +K PD L G +++ V F
Sbjct: 444 GRTVEVLVEGESKNNPDI-LAGYTEKSKLVNF 474
>gi|443632630|ref|ZP_21116809.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
gi|443347453|gb|ELS61511.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
Length = 509
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 248/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 171
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 172 IHRLPELLSEAYLSKEMVIEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y G ++
Sbjct: 231 PYTRGKERSRRPEEIIQEVRRLASEGYKEITLLGQNVNAY------------GKDF---- 274
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ M DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 275 --------EDMTYGLGDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S VL+ M R Y RE Y++LV+KI++ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSEVLKLMARKYDRERYMELVRKIKEAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNALVNEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K PD L G +++ V F
Sbjct: 444 GQVVEVLVEGESKNNPDI-LAGYTEKSKLVNF 474
>gi|107023628|ref|YP_621955.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
cenocepacia AU 1054]
gi|116690713|ref|YP_836336.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
cenocepacia HI2424]
gi|170734056|ref|YP_001766003.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
cenocepacia MC0-3]
gi|254247273|ref|ZP_04940594.1| hypothetical protein BCPG_02060 [Burkholderia cenocepacia PC184]
gi|123244709|sp|Q1BTS3.1|MIAB_BURCA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890456|sp|B1JY57.1|MIAB_BURCC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890457|sp|A0KAB6.1|MIAB_BURCH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|105893817|gb|ABF76982.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
AU 1054]
gi|116648802|gb|ABK09443.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
HI2424]
gi|124872049|gb|EAY63765.1| hypothetical protein BCPG_02060 [Burkholderia cenocepacia PC184]
gi|169817298|gb|ACA91881.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
MC0-3]
Length = 457
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 247/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRASGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGST 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 DIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVSHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETE++ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+GYD ++ F YS R T A N DD P EVK +RL L E+ + S VG V
Sbjct: 328 HEMGYDTSFSFIYSPRPGTPA-ANLADDTPREVKLKRLQHLQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|288556902|ref|YP_003428837.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
pseudofirmus OF4]
gi|288548062|gb|ADC51945.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
pseudofirmus OF4]
Length = 541
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 256/473 (54%), Gaps = 57/473 (12%)
Query: 58 DLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEV 117
DL P G H + TYGCQMN +D E + ++ G++E + ++A+V
Sbjct: 85 DLIPEPMQGIGNGKTFHIR------TYGCQMNTHDSENMAGLLTEMGFTETDDT-KDADV 137
Query: 118 IFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ER 173
I +NTCAIR+ AE+KV+ + + LK+E P+++ V GCM+ E
Sbjct: 138 ILLNTCAIRENAENKVFGEIGHLKSLKKER--------------PEVILGVCGCMSQEEN 183
Query: 174 LKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNS 233
+ ++I+ + +D++ G LP LL+ YG++ + + S E + P R +
Sbjct: 184 VVNRIMQKHQHIDIIFGTHNIHRLPSLLQNAIYGKEMVIEVWSKEGDIVENMP-RKREGK 242
Query: 234 VTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY 293
A+V++M GC+ C++CIVP+TRG+ERSR E I+ EV +L ++G KE+TLLGQNVN+Y
Sbjct: 243 TQAWVNIMYGCDKFCTYCIVPYTRGKERSRLPEDIIDEVRDLARQGYKEITLLGQNVNAY 302
Query: 294 NDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPK 352
+K R L+D + ++ P R R+T+ HP+
Sbjct: 303 GKD------------------------LKDRDYRLGHLMDDIHKIDIP--RVRFTTSHPR 336
Query: 353 DFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGL 412
DF D L+ ++ N+ ++IHLP Q GNS +L+ M R YTRE Y++L KI+ IP
Sbjct: 337 DFDDHLISVLSKGGNLVEHIHLPVQHGNSDILKLMARKYTREQYVELAHKIKMAIPKASF 396
Query: 413 SSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRR 472
++D I GF ETEE+ DTL+L++ + +D A+ + YS RE T A + D+VP EVK+ R
Sbjct: 397 TTDLIVGFPNETEEQFEDTLSLVREIEFDSAFTYIYSPREGTPAAK-MKDNVPMEVKKER 455
Query: 473 LTELIEAFRE-STGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
L L E S + D Q V+ VLVEG +KK PD L G++ V F
Sbjct: 456 LARLNALVNEISAKKNLDYQDQVVE-VLVEGESKKDPDV-LAGRTRTNRLVNF 506
>gi|423013632|ref|ZP_17004353.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Achromobacter
xylosoxidans AXX-A]
gi|338783407|gb|EGP47774.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Achromobacter
xylosoxidans AXX-A]
Length = 475
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 250/465 (53%), Gaps = 41/465 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
A + ++ + + S ++Y T+GCQMN D + + +++ E+ + PE A+VI N
Sbjct: 12 APDGAAVPSAAIGSPRKLYIRTFGCQMNEYDSDKMADVLRGDQGLELTDNPEEADVILFN 71
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC++R+ A+ KV+ L LK+ N+ G V GC+A + + I+
Sbjct: 72 TCSVREKAQEKVFSDLGRVQHLKK-TNPNLVIG-----------VGGCVASQEGEAIVKR 119
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDY-GQKGINTLLSLEETYADISPVRISKNSVTAFVSV 240
VDVV GP LP L++ G+ ++ E + ++ P R+ + TAFVS+
Sbjct: 120 APYVDVVFGPQTLHRLPDLIQRRRAEGRSQVDISFPEIEKFDNMPPPRV--DGATAFVSI 177
Query: 241 MRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGME 300
M GC+ CSFC+VP+TRG E SRP + ++ EV +L +GVKEVTLLGQNVN+Y
Sbjct: 178 MEGCSKYCSFCVVPYTRGEEVSRPFDDVLIEVADLADQGVKEVTLLGQNVNAYRGRMTDS 237
Query: 301 KEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELL 359
E+ FA LL+ + E P + R RYT+ HPK+ ++
Sbjct: 238 DEIAD----------------------FAMLLEYVH-EIPGIERIRYTTSHPKEMTQRMV 274
Query: 360 YIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICG 419
P + ++HLP Q G+ VL M+RGYT + +V+++R PD+ LSSDFI G
Sbjct: 275 DAYARLPKLVSFLHLPVQAGSDRVLAAMKRGYTTLEFKSVVRRLRAARPDLTLSSDFIVG 334
Query: 420 FCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEA 479
F GETEE+ T+ L++ VG+D ++ F YS R T A + DD P++VK RRL L
Sbjct: 335 FPGETEEDFEKTMKLIEDVGFDTSFSFVYSRRPGTPAA-DLHDDTPQDVKLRRLQRLQAL 393
Query: 480 FRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
E + VGT Q +LVEGP+++ P+ EL+G+++ V F
Sbjct: 394 INEQAATIARNMVGTRQRLLVEGPSRRDPN-ELMGRTENNRIVNF 437
>gi|402775944|ref|YP_006629888.1| tRNA modification protein [Bacillus subtilis QB928]
gi|418033152|ref|ZP_12671629.1| hypothetical protein BSSC8_25730 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351469300|gb|EHA29476.1| hypothetical protein BSSC8_25730 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481125|gb|AFQ57634.1| Enzyme for ms(2)i(6)A formation for tRNAmodification [Bacillus
subtilis QB928]
Length = 520
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 248/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 78 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 136
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 137 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 182
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 183 IHRLPELLSEAYLSKEMVVEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 241
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y +
Sbjct: 242 PYTRGKERSRRPEDIIQEVRRLASEGYKEITLLGQNVNAY------------------GK 283
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
F M GL DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 284 DFEDMT----YGL--GDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLLDHI 335
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S VL+ M R Y RE Y++LV+KI++ +P+ L++D I GF ET+E+ +TL
Sbjct: 336 HLPVQSGSSEVLKLMARKYDRERYMELVRKIKEAMPNASLTTDIIVGFPNETDEQFEETL 395
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L E + +
Sbjct: 396 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNALVNEISAKKMKEYE 454
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K PD L G +++ V F
Sbjct: 455 GKVVEVLVEGESKNNPDI-LAGYTEKSKLVNF 485
>gi|157692385|ref|YP_001486847.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
pumilus SAFR-032]
gi|229890424|sp|A8FDH0.1|MIAB_BACP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|157681143|gb|ABV62287.1| tRNA 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032]
Length = 508
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 248/450 (55%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N E+A VI +NTCAIR+ AE+KV+ L
Sbjct: 66 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTNSTEDANVILLNTCAIRENAENKVFGEL 124
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LKRE K ++ G V GCM+ E + ++IL VD++ G
Sbjct: 125 GHLKALKRE-KPDLILG-----------VCGCMSQEESVVNRILKKHPFVDLIFGTHNIH 172
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP LL E ++ + + S E + P R + + +V++M GC+ C++CIVP+
Sbjct: 173 RLPELLSECYLSKEMVIEVWSKEGDVIENLP-RARQGKIKGWVNIMYGCDKFCTYCIVPY 231
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR + I++EV L EG KE+TLLGQNVN+Y + F
Sbjct: 232 TRGKERSRRPDEIIQEVRRLAAEGYKEITLLGQNVNAY------------------GKDF 273
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M + GL L+D L ++ P R R+T+ HP+DF D L+ ++ N+ +IHL
Sbjct: 274 EDM----EYGL--GHLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHL 325
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S+VL+ M R Y RE YLDLV+KI++ +P+ L++D I GF ET+E+ +TL+L
Sbjct: 326 PVQSGSSSVLKLMARKYDRERYLDLVRKIKEAMPNASLTTDIIVGFPNETDEQFEETLSL 385
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A + D+VP VK+ RL L E + + G
Sbjct: 386 YREVEFDAAYTFIYSPREGTPAAK-MQDNVPMHVKKERLQRLNALVNEISAKKMKEYEGQ 444
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K P+ L G + + V F
Sbjct: 445 TVEVLVEGESKNNPEI-LAGYTSKSKLVNF 473
>gi|219854806|ref|YP_002471928.1| hypothetical protein CKR_1463 [Clostridium kluyveri NBRC 12016]
gi|219568530|dbj|BAH06514.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 454
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 244/445 (54%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN D E + I+K GY N +A++I NTC +R+ AE KV+ L
Sbjct: 24 TYGCQMNEEDSEKLSGILKKMGYKRAEN-KLSADLIIFNTCCVRENAELKVYGNLGALKK 82
Query: 143 LKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK++ P I+ L GCM ++ + +K++ VD++ G P
Sbjct: 83 LKKQ-------------RPELIIALCGCMMQQKGMAEKVIKKFPFVDIIFGTHNAYKFPE 129
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L V++ + + E+ + P+ ++SV AFV++M GCNN C++CIVP+ RGR
Sbjct: 130 YLNRVNHQNVSVIEIQDKEDGIVEGVPID-RESSVKAFVTIMYGCNNFCAYCIVPYVRGR 188
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I E+ EL +G KEVTLLGQNVNSY K + P N
Sbjct: 189 ERSRKPEDIENEIKELVSKGYKEVTLLGQNVNSYG------KNLNPRVN----------- 231
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
F++LL R++ R R+ + HPKD D+++ ++ + +C++IHLP Q+G
Sbjct: 232 --------FSELLRRINNVDGIERIRFMTSHPKDLTDDVIDVISECDKICEHIHLPVQSG 283
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L++M R Y++E YL LV +I+ IPD +++D I GF GETEE+ +TL L + V
Sbjct: 284 STRILKKMNRNYSKEQYLALVSEIKHKIPDASITTDIIVGFPGETEEDFEETLNLAEGVE 343
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D A+ F YS RE T A++ + + ++VK R L+E +S + G ++ VL
Sbjct: 344 FDSAFTFIYSKREGTPAYK-IEEQISDDVKHERFNRLVEVINKSAAKKNKVYEGRIEEVL 402
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEGP+K T+L+G++ G V F
Sbjct: 403 VEGPSKN-DSTKLMGRTRTGKLVNF 426
>gi|71731289|gb|EAO33353.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
enzyme MiaB [Xylella fastidiosa subsp. sandyi Ann-1]
Length = 497
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 251/476 (52%), Gaps = 36/476 (7%)
Query: 55 PLADLAPASEVSSATGSEVH----SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVIN 110
PL P ++ TG H S+G+++ +T+GCQMN D + ++ E+ +
Sbjct: 22 PLPAQNPHHTHAAHTGDPSHDRPPSRGKLFIKTHGCQMNEYDSAKMADVLTTTEALELTD 81
Query: 111 VPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCM 170
PE A++I INTC+IR+ A+ KV+ +L + LK + + I V GC+
Sbjct: 82 NPEEADIILINTCSIREKAQEKVFSQLGRWRALKTNGRDVI------------IGVGGCV 129
Query: 171 AERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGINTLLSLEETYADISPVRI 229
A + + I+ VD+V GP LP ++ + + ++ E + + R
Sbjct: 130 ASQEGETIVKRAPYVDLVFGPQTLHRLPDMIRARREQNRPQVDISFPEIEKFDHLPTPRA 189
Query: 230 SKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQN 289
S AFVS+M GC+ CSFC+VP+TRG E SRP E ++ E+ L +GV+E+ LLGQN
Sbjct: 190 EGPS--AFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAHLATQGVREINLLGQN 247
Query: 290 VNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTS 348
VN+Y ++PG + + + LL R +F + R R+T+
Sbjct: 248 VNAYRGA------MDPGPSNNTNPAPPPYADL--------GLLIRAIAQFESIGRIRFTT 293
Query: 349 PHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIP 408
HP +F D L+ RD P + ++HLP Q+G+ +L M+RGYT + ++K+R + P
Sbjct: 294 SHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRP 353
Query: 409 DVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEV 468
D+ +SSDFI GF GE++ + T+ L++ +G+D ++ F YS R T A N D P+E+
Sbjct: 354 DISISSDFIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPA-SNLEDHTPDEI 412
Query: 469 KQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
K+ RL L + +GTVQ VLVEGP+KK P+ EL GK++ V F
Sbjct: 413 KRTRLEHLQKHINAYAADISKRMIGTVQTVLVEGPSKKNPN-ELTGKTENMRPVNF 467
>gi|334340539|ref|YP_004545519.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfotomaculum ruminis
DSM 2154]
gi|334091893|gb|AEG60233.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfotomaculum ruminis
DSM 2154]
Length = 449
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 248/445 (55%), Gaps = 46/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMN D E + ++++ GYS E+A++I +NTC +R+ AE KV F
Sbjct: 12 TFGCQMNERDSESLSGMLEDLGYSPT-ESQEDADIIILNTCCVRETAESKV------FGL 64
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
L R K+ A +P I+ V GCM E +I + VD++ G +LPR
Sbjct: 65 LGRLRKRKTA-------NPNLIIGVCGCMTQQEDAAKRIRHSFPFVDLIFGTHNVHELPR 117
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+L++V ++ + + + E+ A+ PVR K+ + A+V++M GCNN CS+CIVP+ RGR
Sbjct: 118 MLQQVQENKEAVLEIWTSEKGIAEDVPVR-RKDKLKAWVTIMYGCNNFCSYCIVPYVRGR 176
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I KE+ EL KEG KEVTLLGQNVNSY K++E
Sbjct: 177 ERSRKPEDIFKEIKELVKEGYKEVTLLGQNVNSYG------KDLENT------------- 217
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
RFADLL L R R+ + HP+DF L+ ++ VC++ HLP Q G
Sbjct: 218 ------YRFADLLLDLDQIEGLERIRFMTSHPRDFDRRLIQVIASCRKVCEHYHLPVQAG 271
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ VL++M RGYTRE YL+L+++IR+ +P +++D + GF GETEE+ TL L++ V
Sbjct: 272 SNRVLKQMNRGYTREHYLELIREIRRAVPGASITADIMVGFPGETEEDFEQTLDLVQQVR 331
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D A+ F Y+ R T A + ++ VPE +K R+ LIE + + + + G V VL
Sbjct: 332 FDSAFTFIYNTRSGTPAAK--MEQVPEAIKSERIQRLIELQNKISFENNRMEEGKVLEVL 389
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEG K D L G++ V F
Sbjct: 390 VEGVTKSNAD-RLAGRTRTNKLVVF 413
>gi|251777774|ref|ZP_04820694.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum E1
str. 'BoNT E Beluga']
gi|243082089|gb|EES47979.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum E1
str. 'BoNT E Beluga']
Length = 457
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 243/449 (54%), Gaps = 45/449 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+ ET+GCQMN D E + ++K+ GY E N E + VIF NTC +R+ AE+KV+ L
Sbjct: 21 FFIETWGCQMNEEDSEKLSGMLKSQGYEETENRDEASIVIF-NTCCVRENAENKVFGNLG 79
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAYR 195
LK + +KN P I+ L GCM ++ + D+IL VD++ G
Sbjct: 80 R---LKNQKEKN----------PNLIIALCGCMMQQKGMADEILSRFPYVDIIFGTHNAY 126
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
P L V + + E + P+ K++V AFV++M GCNN C++C+VP+
Sbjct: 127 KFPEYLHRVQVEGVQVKEIFDKETEIVEGVPID-RKSNVKAFVTIMYGCNNFCTYCVVPY 185
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
RGRERSR E I E+ EL G KE+TLLGQNVNSY G+E+E+
Sbjct: 186 VRGRERSRRPEDIENEIKELVSNGYKEITLLGQNVNSYG--KGLEEEI------------ 231
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
FA LL R++ R R+ + HPKD +++Y +RD +C+ IHLP
Sbjct: 232 -----------TFAQLLRRINEIGGLERLRFMTSHPKDLTLDVVYAIRDCDKLCEQIHLP 280
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L++M R Y +E YL+L +KIR+ IPDV S+D I GF GETEE+ +T+ L+
Sbjct: 281 VQSGSNKILQKMNRHYNKEQYLELAKKIREEIPDVTFSTDIIVGFPGETEEDFEETINLV 340
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
K V YD A+ F YS R T A + + +P++VK R L+ A E + G +
Sbjct: 341 KEVRYDAAFTFIYSRRNHTPADK-MENQIPDDVKHDRFNRLVAAVNEGIVVGNKAAEGKI 399
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K + +L G++ V F
Sbjct: 400 YEVLVEGTSKNN-ENKLTGRTRNAKLVNF 427
>gi|414155134|ref|ZP_11411449.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453184|emb|CCO09353.1| (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 459
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 250/458 (54%), Gaps = 46/458 (10%)
Query: 70 GSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYA 129
G +++ + +++GCQMN D E + I+++ GY E A++I +NTC +R+ A
Sbjct: 11 GKKINGCKKYLIQSFGCQMNERDAESLSGILEDLGYRPA-QKQEEADIIILNTCCVRETA 69
Query: 130 EHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCM--AERLKDKILDADKMVD 186
E+KV+ L R K VA P I+ V GCM E ++ VD
Sbjct: 70 ENKVY------GLLGRLKKLKVA-------KPDLILGVCGCMPQQEDAARRLRQGFPYVD 116
Query: 187 VVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNN 246
++ G +LPR++++V + + + + E+ + PVR K+ + A+V++M GCNN
Sbjct: 117 IIFGTHNIHELPRMIQQVQQDHQSVFEVWAAEQGIIENIPVR-RKDKLKAWVTIMYGCNN 175
Query: 247 MCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPG 306
C++CIVP+ RGRERSR + I+KE+ L +EG +EVTLLGQNVNSY +
Sbjct: 176 FCTYCIVPYVRGRERSRQPDDIIKEIASLVQEGYQEVTLLGQNVNSYGK--------DLA 227
Query: 307 ANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRP 366
AN+R FADLL L R R+ + HP+DF L+ +
Sbjct: 228 ANYR-----------------FADLLLDLDKIQGLQRIRFMTSHPRDFDQSLIDAIASTT 270
Query: 367 NVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEE 426
VC++ HLPAQ G++ +L+ M RGYTRE YLDLV++I+ P +++D + GF GE+E
Sbjct: 271 KVCEHFHLPAQAGSNRILKLMNRGYTREQYLDLVRRIKAAFPRASITADLMVGFPGESEA 330
Query: 427 EHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQ 486
+ ADTL L++ V YD A+ F Y++R T A + ++ VPEEVK R+ LI+ + + +
Sbjct: 331 DFADTLDLVRQVRYDSAFTFVYNIRSGTPAAK--MEQVPEEVKSDRIQRLIQLQNQISLE 388
Query: 487 CYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G V VLVEG K PD L G++ V F
Sbjct: 389 NNQQEEGKVFEVLVEGETKNNPDL-LAGRTRTNKLVVF 425
>gi|320536571|ref|ZP_08036594.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema phagedenis
F0421]
gi|320146584|gb|EFW38177.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema phagedenis
F0421]
Length = 455
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 252/458 (55%), Gaps = 63/458 (13%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGCQMNV + V ++ G+ E + +++ INTC++R AE +V+ RL
Sbjct: 4 FFETYGCQMNVAESASVEQLLLKRGW-EKAEKADVCDLLIINTCSVRITAETRVFGRLGL 62
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
F LK+ K I+++GCMAERL DKI +D V G
Sbjct: 63 FSALKK-------------KRAFSIILMGCMAERLHDKIKKDFPRLDYVVGMFERNQFTA 109
Query: 200 LLEEV----------------DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRG 243
+ +E+ D+ +K ++ E +Y + + +F+ +M G
Sbjct: 110 IFKEIESKLNKTDYHSEFSGEDFLEKPVSGYHFAESSYIE--------GAFQSFIPIMNG 161
Query: 244 CNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV 303
CNN C++CIVP+ RGRE SR +E+I+ EV+EL ++GV+E+TLLGQNVNSY K+
Sbjct: 162 CNNFCTYCIVPYVRGREISRSLEAILAEVEELSEKGVREITLLGQNVNSYRG-----KDF 216
Query: 304 EPGANWRLSEGFNSMCKV--KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E G E + +V KK +R+ R+ S HPKDF DEL+ +
Sbjct: 217 E-GKLITFPELLRRVARVCEKKDSIRW---------------IRFMSSHPKDFSDELITV 260
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ + P VCK IHLP Q G++AVL+RM R YTRE YL LV K+R +PD LS+D + GF
Sbjct: 261 IAEEPRVCKLIHLPVQHGSNAVLKRMNRSYTREHYLSLVDKLRTKVPDSALSTDILIGFP 320
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
GE+EE+ TL LM+ V +D A+M+ Y+ RE T A+ ++ D +P+ V+ RL ++I+
Sbjct: 321 GESEEDFELTLDLMRQVQFDSAFMYHYNPREGTRAY-DFPDRIPDAVRIARLQQVIDLQM 379
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRG 519
+++ + ++V + VLVE ++ PD EL G ++ G
Sbjct: 380 KTSAEKMRNRVNHILHVLVESRSRNNPD-ELFGHTEFG 416
>gi|424879737|ref|ZP_18303369.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392516100|gb|EIW40832.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 473
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 242/444 (54%), Gaps = 42/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + GY ++ E A+++ +NTC IR+ A KV+ L
Sbjct: 27 KVFIKTYGCQMNVYDSMRMSDALARDGYEPTEDM-EEADLVLLNTCHIREKAAEKVYSAL 85
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K KK A GR I V GC+A+ ++IL VDVV GP Y L
Sbjct: 86 GRLREMK---KKKAADGREM-----MIGVAGCVAQAEGEEILRRAPAVDVVIGPQTYHRL 137
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSVTAFVSVMRGCNNMCSFCIV 253
P L GQ+ ++T ++E+ + + P+ RI VTAF++V GC+ C+FC+V
Sbjct: 138 PEALRLAKQGQRVVDTEYAIEDKFEHL-PIAESRRIRARGVTAFLTVQEGCDKFCTFCVV 196
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRPV IV+E ++L GV+E+TLLGQNVN+++ G W L
Sbjct: 197 PYTRGSEVSRPVSQIVEEAEKLADSGVREITLLGQNVNAWHGAGPQ------GEAWSL-- 248
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
DLL RL+ E P + R RYT+ HP+D D L+ RD + Y+
Sbjct: 249 ---------------GDLLYRLA-EIPGLARLRYTTSHPRDMDDRLINAHRDLSALMPYL 292
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L+ M R +T YL L+++IR + PD+ LS DFI GF GET+E+ DTL
Sbjct: 293 HLPVQSGSDRILKAMNRRHTAAEYLTLIERIRTVRPDIALSGDFITGFPGETDEDFKDTL 352
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V Y A+ F YS R T D VPEE+K RL L + + +S +
Sbjct: 353 RLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLERLQMLLLKQQQEFAESCI 411
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G +L+E P + P+ +L+G+S
Sbjct: 412 GKEIDLLLEKPG-RMPE-QLIGRS 433
>gi|220929121|ref|YP_002506030.1| MiaB family RNA modification protein [Clostridium cellulolyticum
H10]
gi|219999449|gb|ACL76050.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
H10]
Length = 478
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/431 (37%), Positives = 238/431 (55%), Gaps = 42/431 (9%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ET+GCQMN ND E + ++ GYSE + +++++I NTC +R+ AE KV+ L
Sbjct: 46 ETFGCQMNENDSERLSGMLSGMGYSEC-SERKDSDLIIFNTCCVRENAEQKVYGHLGALK 104
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK E N+ I + GCM ++ + + I K VD+V G P
Sbjct: 105 KLK-ETNPNLI-----------IAICGCMMQQKDVVEHIKKTYKHVDIVFGTHNLYKFPE 152
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL + + + + A+ P+ K ++ A+V+VM GCNN CS+CIVP+ RGR
Sbjct: 153 LLNTAITTRSTVIDVWDSTGSIAENMPIS-RKENIKAWVTVMYGCNNFCSYCIVPYVRGR 211
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR +E I EV++L K+G KE+TLLGQNVNSY K++E
Sbjct: 212 ERSRSLEEIKNEVEKLAKDGCKEITLLGQNVNSYG------KDLEGD------------- 252
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
L FA LL L+ R R+ + HPKD DEL+Y MRD VC+++HLP Q G
Sbjct: 253 ------LTFAGLLRELNKVQGIERIRFMTSHPKDLSDELIYAMRDCEKVCEHLHLPVQAG 306
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S +L+ M R Y++E YL L++K++ IP + L++D I GF GETEE+ +TL ++
Sbjct: 307 SSKILDEMNRRYSKEQYLGLIEKVKSNIPGIALTTDIIVGFPGETEEDFNETLDVVAKAR 366
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+DMAY F YS R T A +N + +PE VK++R L+E + + + D +G VL
Sbjct: 367 FDMAYTFLYSKRTGTPAAKN-PEQIPETVKKQRFDRLLELQNKISKEINDGLLGKELEVL 425
Query: 500 VEGPNKKAPDT 510
VEG +K + T
Sbjct: 426 VEGLSKSSKTT 436
>gi|296330914|ref|ZP_06873389.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305674432|ref|YP_003866104.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
subtilis subsp. spizizenii str. W23]
gi|350266015|ref|YP_004877322.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|296151919|gb|EFG92793.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305412676|gb|ADM37795.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
subtilis subsp. spizizenii str. W23]
gi|349598902|gb|AEP86690.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 509
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 247/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 171
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 172 IHRLPELLSEAYLSKEMVIEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y +
Sbjct: 231 PYTRGKERSRRPEEIIQEVRRLASEGYKEITLLGQNVNAY------------------GK 272
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
F M GL DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 273 DFEDMT----YGL--GDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S VL+ M R Y RE Y++LV+KI+ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSEVLKLMARKYDRERYMELVRKIKAAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNALVNEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K PD L G +++ V F
Sbjct: 444 GKVVEVLVEGESKNNPDI-LAGYTEKSKLVNF 474
>gi|428279299|ref|YP_005561034.1| hypothetical protein BSNT_02749 [Bacillus subtilis subsp. natto
BEST195]
gi|291484256|dbj|BAI85331.1| hypothetical protein BSNT_02749 [Bacillus subtilis subsp. natto
BEST195]
Length = 509
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 247/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 171
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 172 IHRLPELLSEAYLSKEMVVEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y G ++
Sbjct: 231 PYTRGKERSRRPEDIIQEVRRLASEGYKEITLLGQNVNAY------------GKDF---- 274
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ M DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 275 --------EDMTYGLGDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S VL+ M R Y RE Y++LV+KI+ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSEVLKLMARKYDRERYMELVRKIKTAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNALVNEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K PD L G +++ V F
Sbjct: 444 GKVVEVLVEGESKNNPDI-LAGYTEKSKLVNF 474
>gi|241202785|ref|YP_002973881.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240856675|gb|ACS54342.1| RNA modification enzyme, MiaB family [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 473
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 242/444 (54%), Gaps = 42/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + GY ++ E A+++ +NTC IR+ A KV+ L
Sbjct: 27 KVFIKTYGCQMNVYDSMRMSDALARDGYEPTDDM-EEADLVLLNTCHIREKAAEKVYSAL 85
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K KK A GR I V GC+A+ ++IL VDVV GP Y L
Sbjct: 86 GRLRDMK---KKKAADGREM-----MIGVAGCVAQAEGEEILRRAPAVDVVIGPQTYHRL 137
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSVTAFVSVMRGCNNMCSFCIV 253
P L GQ+ ++T ++E+ + + P+ RI VTAF++V GC+ C+FC+V
Sbjct: 138 PEALRLAKQGQRVVDTEYAIEDKFEHL-PIAESRRIRARGVTAFLTVQEGCDKFCTFCVV 196
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRPV IV+E ++L GV+E+TLLGQNVN+++ G W L
Sbjct: 197 PYTRGSEVSRPVSQIVEEAEKLADSGVREITLLGQNVNAWHGAGPQ------GEAWSL-- 248
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
DLL RL+ E P + R RYT+ HP+D D L+ RD + Y+
Sbjct: 249 ---------------GDLLYRLA-EIPGLARLRYTTSHPRDMDDRLINAHRDLSALMPYL 292
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L+ M R +T YL L+++IR + PD+ LS DFI GF GET+E+ DTL
Sbjct: 293 HLPVQSGSDRILKAMNRRHTAAEYLTLIERIRTVRPDIALSGDFITGFPGETDEDFKDTL 352
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V Y A+ F YS R T D VPEE+K RL L + + +S +
Sbjct: 353 RLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLERLQMLLLKQQQEFAESCI 411
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G +L+E P + P+ +L+G+S
Sbjct: 412 GKEIDLLLEKPG-RMPE-QLIGRS 433
>gi|449094387|ref|YP_007426878.1| putative conserved AdoMet radical enzyme for tRNA modification
[Bacillus subtilis XF-1]
gi|449028302|gb|AGE63541.1| putative conserved AdoMet radical enzyme for tRNA modification
[Bacillus subtilis XF-1]
Length = 520
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/452 (37%), Positives = 247/452 (54%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N ++A VI +NTCAIR+ AE+KV+ L
Sbjct: 78 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EATNSVDDANVILLNTCAIRENAENKVFGEL 136
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDA 193
+ LK K+ P ++ V GCM+ E + ++IL VD++ G
Sbjct: 137 GHLKALK--------------KNNPDLILGVCGCMSQEESVVNRILKKHPFVDMIFGTHN 182
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIV
Sbjct: 183 IHRLPELLSEAYLSKEMVVEVWSKEGDVIENLP-KVRNGKIKGWVNIMYGCDKFCTYCIV 241
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y +
Sbjct: 242 PYTRGKERSRRPEDIIQEVRRLASEGYKEITLLGQNVNAY------------------GK 283
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
F M GL DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 284 DFEDMT----YGL--GDLMDELRKIDIP--RIRFTTSHPRDFDDRLIEVLAKGGNLLDHI 335
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S VL+ M R Y RE Y++LV+KI+ +P+ L++D I GF ET+E+ +TL
Sbjct: 336 HLPVQSGSSEVLKLMARKYDRERYMELVRKIKAAMPNASLTTDIIVGFPNETDEQFEETL 395
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L E + +
Sbjct: 396 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNALVNEISAKKMKEYE 454
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K PD L G +++ V F
Sbjct: 455 GKVVEVLVEGESKNNPDI-LAGYTEKSKLVNF 485
>gi|407979369|ref|ZP_11160185.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus sp.
HYC-10]
gi|407413976|gb|EKF35647.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus sp.
HYC-10]
Length = 508
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 248/450 (55%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N E+A VI +NTCAIR+ AE+KV+ L
Sbjct: 66 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTNSTEDANVILLNTCAIRENAENKVFGEL 124
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LKRE K ++ G V GCM+ E + ++IL VD++ G
Sbjct: 125 GHLKALKRE-KPDLILG-----------VCGCMSQEESVVNRILKKHPFVDLIFGTHNIH 172
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP LL E ++ + + S E + P R + + +V++M GC+ C++CIVP+
Sbjct: 173 RLPELLSECYLSKEMVIEVWSKEGDVIENLP-RARQGKIKGWVNIMYGCDKFCTYCIVPY 231
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR + I++EV L EG KE+TLLGQNVN+Y + F
Sbjct: 232 TRGKERSRRPDEIIQEVRRLAAEGYKEITLLGQNVNAY------------------GKDF 273
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M + GL L+D L ++ P R R+T+ HP+DF D L+ ++ N+ +IHL
Sbjct: 274 EDM----EYGL--GHLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHL 325
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+SAVL+ M R Y RE YL+LV+KI++ +P+ L++D I GF ET+E+ +TL+L
Sbjct: 326 PVQSGSSAVLKLMARKYDRERYLELVRKIKEAMPNASLTTDIIVGFPNETDEQFEETLSL 385
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A + D+VP VK+ RL L E + + G
Sbjct: 386 YREVEFDAAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNALVNEISAKKMKEYEGQ 444
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K P+ L G + + V F
Sbjct: 445 TVEVLVEGESKNNPEI-LAGYTSKSKLVNF 473
>gi|187935420|ref|YP_001886001.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
botulinum B str. Eklund 17B]
gi|229890485|sp|B2TIA8.1|MIAB_CLOBB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|187723573|gb|ACD24794.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium botulinum B
str. Eklund 17B]
Length = 456
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 243/448 (54%), Gaps = 45/448 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ET+GCQMN D E + ++K+ GY E N E + VIF NTC +R+ AE+KV+ L
Sbjct: 22 FIETWGCQMNEEDSEKLSGMLKSQGYEETENRDEASIVIF-NTCCVRENAENKVFGNLGR 80
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAYRD 196
LK + +KN P I+ L GCM ++ + D+IL VD++ G
Sbjct: 81 ---LKNQKEKN----------PNLIIALCGCMMQQKGMADEILSRFPYVDIIFGTHNAYK 127
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L V + + E + P+ K++V AFV++M GCNN C++C+VP+
Sbjct: 128 FPEYLHRVQVEGVQVKEIFDKETEIVEGVPID-RKSNVKAFVTIMYGCNNFCTYCVVPYV 186
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR E I E+ EL G KE+TLLGQNVNSY G+E+E+
Sbjct: 187 RGRERSRRPEDIENEIKELVSSGYKEITLLGQNVNSYG--KGLEEEI------------- 231
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LL R++ R R+ + HPKD +++Y +RD +C+ IHLP
Sbjct: 232 ----------TFAQLLRRINEIDGLERLRFMTSHPKDLTLDVVYAIRDCDKLCEQIHLPV 281
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L++M R Y +E YL+L +KIR+ IPDV S+D I GF GETEE+ +T+ L+K
Sbjct: 282 QSGSNEILQKMNRHYNKEQYLELAKKIREEIPDVTFSTDIIVGFPGETEEDFEETINLVK 341
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD A+ F YS R T A + + +P++VK R L+ A E + G +
Sbjct: 342 EVRYDAAFTFIYSRRNHTPADK-MENQIPDDVKHDRFNRLVAAVNEGIVVGNKAAEGKIY 400
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K + +L G++ V F
Sbjct: 401 EVLVEGTSKNN-ENKLTGRTRNAKLVNF 427
>gi|167579900|ref|ZP_02372774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis TXDOH]
Length = 457
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 249/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K ++ G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPDLLIG-----------VGGCVASQEGASIVARAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ + G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRESGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ E+ L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGAH 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F LL + P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y L++K+R I P++ LS+D I GF GETE + T+ L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSLIRKLRAIRPNLSLSTDIIVGFPGETEADFDKTMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK RL L E+ + S +G V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLADDTPREVKLERLQHLQATIEENVARISQSMLGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|194014848|ref|ZP_03053465.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacillus pumilus ATCC
7061]
gi|194013874|gb|EDW23439.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacillus pumilus ATCC
7061]
Length = 508
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 247/450 (54%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E N E+A VI +NTCAIR+ AE+KV+ L
Sbjct: 66 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTNSTEDANVILLNTCAIRENAENKVFGEL 124
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LKRE K ++ G V GCM+ E + +IL VD++ G
Sbjct: 125 GHLKALKRE-KPDLILG-----------VCGCMSQEESVVKRILKKHPFVDLIFGTHNIH 172
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP LL E ++ + + S E + P R + + +V++M GC+ C++CIVP+
Sbjct: 173 RLPELLSECYLSKEMVIEVWSKEGDVIENLP-RARQGKIKGWVNIMYGCDKFCTYCIVPY 231
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR + I++EV L EG KE+TLLGQNVN+Y + F
Sbjct: 232 TRGKERSRRPDEIIQEVRRLAAEGYKEITLLGQNVNAY------------------GKDF 273
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
M + GL L+D L ++ P R R+T+ HP+DF D L+ ++ N+ +IHL
Sbjct: 274 EDM----EYGL--GHLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHIHL 325
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S+VL+ M R Y RE YLDLV+KI++ +P+ L++D I GF ET+E+ +TL+L
Sbjct: 326 PVQSGSSSVLKLMARKYDRERYLDLVRKIKEAMPNASLTTDIIVGFPNETDEQFEETLSL 385
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A + D+VP VK+ RL L E + + G
Sbjct: 386 YREVEFDAAYTFIYSPREGTPAAK-MQDNVPMHVKKERLQRLNALVNEISAKKMKEYEGQ 444
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K P+ L G + + V F
Sbjct: 445 TVEVLVEGESKNNPEI-LAGYTSKSKLVNF 473
>gi|121533678|ref|ZP_01665505.1| RNA modification enzyme, MiaB family [Thermosinus carboxydivorans
Nor1]
gi|121307669|gb|EAX48584.1| RNA modification enzyme, MiaB family [Thermosinus carboxydivorans
Nor1]
Length = 451
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 242/445 (54%), Gaps = 44/445 (9%)
Query: 74 HSQGRIYQE-TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
+ Q R Y TYGCQMN ND E + ++ GYS + E A++I INTC +R+ AE K
Sbjct: 12 YGQSRKYHIITYGCQMNENDSERLAGQLRGLGYSSTDQI-EQADLILINTCCVRESAEKK 70
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
++ ++ LK N+ G V GC++++ +DKI VD+V G
Sbjct: 71 IYGKIGELKRLK-TVNPNLLIG-----------VTGCLSQKDRDKIFTKAPHVDLVMGTH 118
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYA-DISPVRISKNSVTAFVSVMRGCNNMCSFC 251
L L++E+ + + + E A D+ VR K+ V+A+V +M GCNN C++C
Sbjct: 119 NVHQLTDLIKEISQSRDRVLAVWDQAERLAPDVPTVR--KSQVSAWVPIMYGCNNFCTYC 176
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVP+ RGRERSRP+ I+ EV +L EG KE+TLLGQNVNSY
Sbjct: 177 IVPYVRGRERSRPLADILAEVRQLGTEGFKEITLLGQNVNSYG----------------- 219
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
K + + FADLL + R RY + HP+D +++ +++ +C++
Sbjct: 220 --------KDGEETIDFADLLAAVDKVETIARIRYMTSHPRDMNAKVIAVIKHGQRICEH 271
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
HLP Q+G+ VL+RM RGYT E Y LV+KIR IP +++D I GF GET+E T
Sbjct: 272 FHLPVQSGSDIVLQRMNRGYTTEYYRKLVEKIRSEIPHASITTDIIVGFPGETDELFMQT 331
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L ++++ +D AY F YS R T A D VP +K++RL +L+ E + ++
Sbjct: 332 LDFVRSIRFDAAYTFLYSPRSGTPAA-TMPDQVPLAIKKQRLQQLMAVQNEISLAINEAL 390
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKS 516
+G VLVEGP+K PD +++G++
Sbjct: 391 IGQTVEVLVEGPSKNDPD-KMMGRT 414
>gi|372279627|ref|ZP_09515663.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Oceanicola sp.
S124]
Length = 441
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 238/445 (53%), Gaps = 39/445 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D E + + GY+EV + PE A++I +NTC IR+ A KV+ L
Sbjct: 6 KLFIKTYGCQMNVYDSERMAEALGGQGYTEVAS-PEEADMILLNTCHIREKAAEKVYSEL 64
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK +K K V GC+A+ +I+ MVD+V GP +Y L
Sbjct: 65 GRLRHLK------------AAKPDLKFGVAGCVAQAEGREIMLRQPMVDLVVGPQSYHRL 112
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P + V G++ ++T + E+ + + +K TAF++V GC+ C+FC+VP+TR
Sbjct: 113 PEMEARVRSGERALDTEMPEEDKFEKLKHRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTR 172
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRPV+ +++E +L + GV+E+TLLGQNVN+Y+ E G +W L+ +
Sbjct: 173 GAEVSRPVDRVLREARDLVERGVREITLLGQNVNAYH------SEGPDGRDWGLARLVRA 226
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ ++ + R R+T+ HP D D+L+ D + Y+HLP Q
Sbjct: 227 LAEIDDL-----------------KRIRFTTSHPNDMEDDLIAAHGDCEKLMPYLHLPVQ 269
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L+RM R +TR++Y+ L+++IR PD+ +S DFI GF ET+ + DT+ L++
Sbjct: 270 SGSDRILKRMNRSHTRDSYMALIERIRAARPDIAISGDFIVGFPEETDADFRDTMALVEQ 329
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y + F YS R T A + VP EV RL EL + VG
Sbjct: 330 VNYAACFSFKYSSRPGTPAA-DRGGQVPAEVASARLIELQALLGRQQQDFMRAMVGREVG 388
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
VL E P + A ++VGKSD H V
Sbjct: 389 VLFEKPGRHA--GQMVGKSDHLHAV 411
>gi|337281099|ref|YP_004620571.1| 2-methylthioadenine synthetase [Ramlibacter tataouinensis TTB310]
gi|334732176|gb|AEG94552.1| 2-methylthioadenine synthetase-like protein [Ramlibacter
tataouinensis TTB310]
Length = 447
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 246/450 (54%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNA-GYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ +T+GCQMN D + + +MK A GY +V E A++I NTC++R+ A+ KV+
Sbjct: 4 KVFIKTFGCQMNEYDSDKMADVMKAAEGYEPTSDV-EQADLILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK I V GC+A + I++ VD+V GP
Sbjct: 63 LGRVKHLKARGAL--------------IGVGGCVASQEGAAIVERAPYVDLVFGPQTLHR 108
Query: 197 LPRLLEEVDYGQK-GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L + ++ ++ E + + P R+ TAFVS+M GC+ CS+C+VP+
Sbjct: 109 LPEMLARRERERRPQVDISFPEIEKFDHLPPARV--EGATAFVSIMEGCSKYCSYCVVPY 166
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP E ++ EV L ++GV+EVTLLGQNVN+Y G E+
Sbjct: 167 TRGEEVSRPFEDVLAEVAGLAEQGVREVTLLGQNVNAYRGRMGSTAEIA----------- 215
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FA L++ ++ E P + R RYT+ HP +F L+ P + ++HL
Sbjct: 216 -----------DFALLVEYVA-EIPGIERIRYTTSHPNEFTPRLIEAYARVPKLVSHLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT Y V+K+R I P + LSSDFI GF GETE++ A T+ L
Sbjct: 264 PVQHGSDRILMAMKRGYTAMEYKSTVRKLRAIRPQLSLSSDFIVGFPGETEDDFARTMKL 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VGYD ++ F +S R T A + + DD P++VK RRL +L A + + S+VGT
Sbjct: 324 IEDVGYDTSFSFMFSPRPGTPAAQLH-DDTPQQVKLRRLQQLQAAIEANAQRISASRVGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ VLVEGP++K P EL G+++ V F
Sbjct: 383 VQRVLVEGPSRKDP-AELSGRTECNRVVNF 411
>gi|118580144|ref|YP_901394.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pelobacter
propionicus DSM 2379]
gi|229890588|sp|A1APR6.1|MIAB_PELPD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|118502854|gb|ABK99336.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pelobacter propionicus
DSM 2379]
Length = 440
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 241/450 (53%), Gaps = 41/450 (9%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
+Q +Y ET+GCQMNVND E +L+++ + GY P A +I +NTC++R AE KV+
Sbjct: 2 TQNYVYIETFGCQMNVNDSERILTMLADIGYVPT-QEPARARLILLNTCSVRAGAEEKVY 60
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
+RL LKR + + I V GC+A++ + +L+ +D+V G
Sbjct: 61 RRLENLVVLKRHNSRLI------------IGVGGCVAQQEGEALLERIPKLDLVFGTHNL 108
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
L ++ + G++ T + D+ P +++FV+VM+GC N CS+CIVP
Sbjct: 109 HLLNDMVLAAERGERKSETSFIDNDQRLDLFPPIRGTARISSFVTVMQGCENYCSYCIVP 168
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+ RG E SR I++EV +L +GV+EV LLGQNVNSY G++ EP
Sbjct: 169 YVRGPEVSRRSGDILREVRQLADQGVREVALLGQNVNSY----GLKSSAEPS-------- 216
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FA+L+ ++ R R+ + HPKD EL+ D P +C +HL
Sbjct: 217 -------------FAELIRLVAAVDGIRRIRFFTSHPKDMSPELIACFGDLPALCSQLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
PAQ+G+ VL RM RGYTRE YL+ V+ +R + PD+ + D I GF GETEEE +TL+L
Sbjct: 264 PAQSGSDNVLARMGRGYTREEYLEKVRALRAVRPDIVFTGDMIVGFPGETEEEFQETLSL 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
M+ V Y + FAYS R T A DD+ KQ RL L + +T + D +GT
Sbjct: 324 MEEVRYIDLFSFAYSPRPGTRAA-ELADDLSRGEKQSRLERLQALQKRTTMEINDVLLGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVE K+ ++ GK+D G V F
Sbjct: 383 RQTVLVEREGKRP--GQISGKADNGRTVNF 410
>gi|395791971|ref|ZP_10471410.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella vinsonii subsp. arupensis Pm136co]
gi|395432890|gb|EJF98864.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella vinsonii subsp. arupensis Pm136co]
Length = 458
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 238/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P +A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSQGYV-TTQTPNDADLILVNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E R+ K P I V GC+A+ +IL VD+V GP Y L
Sbjct: 75 GRLRVMRQE--------RTPDK-PLMIGVTGCVAQAEGSEILRRAPTVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K I T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PDLLEKAKQGKKVIETDYAVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 186 YTRGAEISRSVEQITEEARQLIEAGVKEITLLGQNVNGWHGQSAN------GKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSIHYLQLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETIKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K V Y AY F YS R T +N+VD E VK RL L E S++
Sbjct: 343 IKQVQYSSAYSFKYSPRPGTVGATMKNHVD---ETVKDARLQHLQVLLLEQQNAFLRSKI 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + ++VG+S
Sbjct: 400 GQTTDVLIEKAGRHS--GQMVGRS 421
>gi|83949580|ref|ZP_00958313.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius nubinhibens
ISM]
gi|83837479|gb|EAP76775.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius nubinhibens
ISM]
Length = 440
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 237/445 (53%), Gaps = 40/445 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +TYGCQMNV D E + + GY E PE A++I +NTC IR+ A KV+ L
Sbjct: 6 KLYIKTYGCQMNVYDSERMAEALGGQGYVET-QSPEEADMILLNTCHIREKAAEKVYSEL 64
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK ++K KI V GC+A+ ++I+ +VD+V GP +Y L
Sbjct: 65 GRMRGLK------------EAKPDLKIGVAGCVAQAEGEEIMRRQPLVDLVVGPSSYHRL 112
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P + E+ GQK + T E+ +A + ++ +AF+SV GC+ C+FC+VP+TR
Sbjct: 113 PEMEEKTRQGQKALVTDFPEEDKFARLKGRPKAQRGPSAFLSVQEGCDKFCAFCVVPYTR 172
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRPV++++ E +L + GV+E+TLLGQNVN+Y+ E GA W L+
Sbjct: 173 GAEYSRPVKAVLDEARDLIERGVREITLLGQNVNAYHG------EGPDGAEWGLARLIWE 226
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ D LD L R R+T+ HP D L+ + + Y+HLP Q
Sbjct: 227 L-----------DKLDGLQ------RIRFTTSHPNDMDAALIEALGSCAKLMPYLHLPVQ 269
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L+RM R +T E+YL L+++IR PD+ LS DFI GF ETEE+ TL L++A
Sbjct: 270 SGSDRILKRMNRSHTAESYLRLMEEIRAARPDIVLSGDFIVGFPEETEEDFQATLDLVEA 329
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y AY F YS R T A V E VK RL L + + D VG
Sbjct: 330 VKYGYAYSFKYSTRPGTPAAERA--QVEEAVKTERLGRLQDLITRHQREIQDGMVGREMS 387
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
VL E P + + ++VGKSD H V
Sbjct: 388 VLFEKPGRF--EGQMVGKSDYLHAV 410
>gi|395778720|ref|ZP_10459232.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella elizabethae Re6043vi]
gi|423714966|ref|ZP_17689190.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella elizabethae F9251]
gi|395417928|gb|EJF84265.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella elizabethae Re6043vi]
gi|395430450|gb|EJF96492.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella elizabethae F9251]
Length = 458
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 238/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + GY P++A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSAQGYV-TTQTPDDADLILVNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E R+ K P + V GC+A+ +IL VD+V GP Y L
Sbjct: 75 GRLRVMRQE--------RTPDK-PLTVGVTGCVAQAEGSEILRRAPTVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LE+ G+K I T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PEFLEKAKQGKKIIETDYAVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 186 YTRGAEISRSVEQITEEARQLIEAGVKEITLLGQNVNGWHGQSA------DGKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDMLMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL +++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSSYYLHIIEKIRAARPDIAFSGDFIVGFPGETDEDFEETIKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
++ V Y AY F YS R T +N+VD E VK RL L E S++
Sbjct: 343 IQQVQYSSAYSFKYSPRPGTVGATMKNHVD---EAVKDARLQHLQVLLLEQQNTFLRSKI 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E P + + ++VG+S
Sbjct: 400 GQKADVLIEKPGRHS--GQMVGRS 421
>gi|403530131|ref|YP_006664660.1| hypothetical protein RM11_0203 [Bartonella quintana RM-11]
gi|403232203|gb|AFR25946.1| hypothetical protein RM11_0203 [Bartonella quintana RM-11]
Length = 458
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 239/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P +A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSKGYV-ATQTPNDADLILLNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E R+ K P I V GC+A+ ++IL MVD+V GP Y L
Sbjct: 75 GRLRVMRQE--------RTLDK-PLMIGVTGCVAQAEGNEILRRAPMVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K + T +E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PDLLEQTKQGKKIVETDYPVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN G ++ G WRL +
Sbjct: 186 YTRGAEISRSVEQITEEARQLIEAGVKEITLLGQNVN------GWHGQIANGKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSIHYLHLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETVKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K V Y AY F YS R T +N+VD E VK RL L E S++
Sbjct: 343 IKQVQYSSAYSFKYSPRPGTIGATMKNHVD---EAVKDARLQHLQVLLLEQQNAFLRSKI 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + ++VG+S
Sbjct: 400 GQTTDVLIEKVGRHS--GQMVGRS 421
>gi|357007961|ref|ZP_09072960.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
elgii B69]
Length = 491
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 255/446 (57%), Gaps = 46/446 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
+TYGCQMN +D E++ +++ GY + + A++I +NTCA+R+ AE KV+ L +
Sbjct: 55 QTYGCQMNEHDTEMIKGLLEQMGYRSTDD-RKQADIILLNTCAVRENAEDKVFGELGHLK 113
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK E K ++ G V GCM+ E + ++IL VD++ G LP
Sbjct: 114 HLKIE-KPSLILG-----------VCGCMSQEESVVNRILKKHPFVDLIFGTHNIHRLPF 161
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL+E + ++ + + S E + P + + + A+V++M GC+ C++CIVP+TRG+
Sbjct: 162 LLKEAMFSKEMVIEVWSKEGDIIENLPKK--REGIKAWVNIMYGCDKFCTYCIVPYTRGK 219
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR + ++ EV +L ++G KE+ LLGQNVN+Y + F+ M
Sbjct: 220 ERSRLPQDVIAEVRDLARQGFKEIMLLGQNVNAY------------------GKDFDDM- 260
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
K GL DL+D + ++ P R R+T+ HP+DF D L+ ++ + N+ ++IHLP Q+
Sbjct: 261 ---KYGL--GDLMDEVRKIDIP--RVRFTTSHPRDFDDHLIEVLAKKGNLMEHIHLPVQS 313
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ +L+RM R YTRE YL+LV KI++ IPDV L++D I GF GET+E+ +T++L++ V
Sbjct: 314 GSNEILKRMSRKYTREHYLELVAKIKKAIPDVVLTTDIIVGFPGETDEQFEETISLVQEV 373
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
GYD A+ F YS RE T A D+VP EVK+ RL L + Q + G V
Sbjct: 374 GYDSAFTFIYSPREGTPA-AGMEDNVPYEVKRDRLIRLNDVLNVYAKQSNERLKGQTLEV 432
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +K L G+S V F
Sbjct: 433 LVEGESKNNAAV-LAGRSRTNKLVHF 457
>gi|296132994|ref|YP_003640241.1| MiaB family RNA modification protein [Thermincola potens JR]
gi|296031572|gb|ADG82340.1| RNA modification enzyme, MiaB family [Thermincola potens JR]
Length = 449
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 240/428 (56%), Gaps = 44/428 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ + +T+GCQMN D E + +++ GY V N E+A++I +NTC +R+ AE+KVW R+
Sbjct: 10 KYFLQTFGCQMNERDSETMAGLLEGMGYEPVANA-EDADIIILNTCTVRETAENKVWGRI 68
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAY 194
LK SK P I+ + GCMA++ +KI ++++ G
Sbjct: 69 GELKALK-------------SKKPDVIIGICGCMAQQKETAEKIRRKAPHIELIFGTHNI 115
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
+LP ++ + +K + + + E + + P R K+ V AFVS+M GCNN C++CIVP
Sbjct: 116 HELPEMINRLVAERKPLLNVWNAEGSIVENLPAR-RKSKVKAFVSIMFGCNNFCTYCIVP 174
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+ RGRERSR + IV+EV L ++G KEVTLLGQNVNSY L E
Sbjct: 175 YVRGRERSRQIADIVREVKSLAEQGYKEVTLLGQNVNSYGKD--------------LPEK 220
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ F+DLL+ L+ R RY + HP+DF +L+ ++ VC++ HL
Sbjct: 221 TD-----------FSDLLEVLNEIDGIRRIRYMTSHPRDFTSKLIDVIARSEKVCEHFHL 269
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++++L++M RGYTRE Y +LV +IR IP +++D I GF GET ++ +T+ L
Sbjct: 270 PVQSGSNSILKKMNRGYTREYYFELVAEIRSKIPHASITTDIIVGFPGETRQDFENTMDL 329
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V YD A+ F Y+ R T A + D VP+E K +R+ ELIE + + + +VG
Sbjct: 330 LDKVRYDSAFTFVYNKRSGTPAA-SMTDQVPDEEKSKRIVELIEFQNKISLEKNLCEVGR 388
Query: 495 VQLVLVEG 502
VL EG
Sbjct: 389 EHEVLAEG 396
>gi|15614935|ref|NP_243238.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
halodurans C-125]
gi|81786524|sp|Q9KAB7.1|MIAB_BACHD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|10174992|dbj|BAB06091.1| BH2372 [Bacillus halodurans C-125]
Length = 538
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 248/445 (55%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN++D E + ++K G+ E + +A+VI INTCAIR+ AE+KV+ +
Sbjct: 101 TYGCQMNIHDSENMAGMLKEMGF-EATDETTDADVILINTCAIRENAENKVFGEIGNLKQ 159
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPRL 200
LKRE + V I V GCM+ E + ++I+ + +D++ G LP L
Sbjct: 160 LKREKPELV------------IGVCGCMSQEEGVVNRIMQKHQHIDMIFGTHNIHRLPHL 207
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
L +G++ I + S E + P R + A+V++M GC+ C++CIVP+TRG+E
Sbjct: 208 LRNALFGKEMIIEVWSKEGDIVENMP-RAREGKTQAWVNIMYGCDKFCTYCIVPYTRGKE 266
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
RSR E I++EV +L ++G KE+TLLGQNVN+Y
Sbjct: 267 RSRRPEDIIQEVRDLARQGYKEITLLGQNVNAYGKD------------------------ 302
Query: 321 VKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+ + DL+D + ++ P R R+T+ HP+DF D L+ ++ N+ ++IHLP Q G
Sbjct: 303 LADLDYGLGDLMDEIRKIDIP--RVRFTTSHPRDFDDHLIEVLAKGGNLVEHIHLPVQHG 360
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
NS +L+ M R YTRE Y++L QKI++ IP+ ++D I GF ET+E+ DTL+L++ +
Sbjct: 361 NSEILKLMARKYTREQYVELAQKIKRAIPNASFTTDLIVGFPNETDEQFEDTLSLVREIE 420
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D A+ + YS RE T A + D+VP EVK+ RL L + + Q V VL
Sbjct: 421 FDSAFTYIYSPREGTPAAK-MKDNVPMEVKRERLARLNALVNDISAQKNLEYQDKVVEVL 479
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +KK P+ L G++ V F
Sbjct: 480 VEGESKKDPNI-LAGRTRTNRLVNF 503
>gi|206559304|ref|YP_002230065.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
cenocepacia J2315]
gi|444361942|ref|ZP_21162516.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
BC7]
gi|444369713|ref|ZP_21169435.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
K56-2Valvano]
gi|229890458|sp|B4EBG2.1|MIAB_BURCJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|198035342|emb|CAR51217.1| putative tRNA thiotransferase protein MiaB [Burkholderia
cenocepacia J2315]
gi|443597862|gb|ELT66269.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
BC7]
gi|443598667|gb|ELT66999.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia cenocepacia
K56-2Valvano]
Length = 457
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 248/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRASGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LAAGSS 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVNHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETE++ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+GYD ++ F YS R T A N DD P +VK +RL L E+ + S VG V
Sbjct: 328 HEMGYDTSFSFIYSPRPGTPA-ANLADDTPRDVKLKRLQHLQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|359412958|ref|ZP_09205423.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Clostridium sp. DL-VIII]
gi|357171842|gb|EHJ00017.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Clostridium sp. DL-VIII]
Length = 454
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 245/449 (54%), Gaps = 47/449 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ +TYGCQMN D E + +++K GY N E A +I NTC +R+ AE+KV+ L
Sbjct: 21 FIQTYGCQMNEEDSEKLSAMLKIMGYESTENRDE-ASIIIFNTCCVRENAENKVFGNLG- 78
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRD 196
A + + K+P ++ + GCM ++ + D+IL V+++ G
Sbjct: 79 ------------ALKKQKEKNPDLVIGICGCMMQQKGMADEILKRFPYVNIIFGTHNSYK 126
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L V I +++ E + P+ K++V FV++M GCNN C++CIVP+
Sbjct: 127 FPEYLNRVKTEGVQIKEIINKETEIVEGIPID-RKSAVKGFVTIMYGCNNFCTYCIVPYV 185
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR E I+ E+ E+ G KEVTLLGQNVNSY G++ ++
Sbjct: 186 RGRERSRKSEDIINEIKEMVANGYKEVTLLGQNVNSYG----------KGSDENIT---- 231
Query: 317 SMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
FADLL +++ +E E R R+ + HPKD +++Y +RD VC+ IHLP
Sbjct: 232 -----------FADLLRKVNEIEGIE-RIRFMTSHPKDLTLDVVYAIRDCDKVCEQIHLP 279
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L+ M R YT+E Y++L +KIR+ IPDV S+D I GF GETEE+ +TL L
Sbjct: 280 VQSGSNRILKEMNRHYTKEQYIELAKKIREEIPDVTFSTDIIVGFPGETEEDFNETLELA 339
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
K V YD A+ F YS R T A + + + ++VK R L+E + G +
Sbjct: 340 KEVQYDAAFTFIYSRRNHTPADK-MENQISDDVKHERFNRLVEVVNSGIAKGNKEAEGKI 398
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K +++L+G++ G V F
Sbjct: 399 YEVLVEGTSKN-DESKLMGRTRNGRLVNF 426
>gi|28057765|gb|AAO29613.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
Length = 475
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 243/452 (53%), Gaps = 32/452 (7%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
S+G+++ +T+GCQMN D + ++ E+ + PE A++I INTC+IR+ A+ KV+
Sbjct: 24 SRGKLFIKTHGCQMNEYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVF 83
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
+L + LK + + I V GC+A + + I+ VD+V GP
Sbjct: 84 SQLGRWRALKTNGRDVI------------IGVGGCVASQEGETIVKRAPYVDLVFGPQTL 131
Query: 195 RDLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP ++ + + ++ E + + R S AFVS+M GC+ CSFC+V
Sbjct: 132 HRLPDMIRARREQNRPQVDISFPEIEKFDHLPTPRAEGPS--AFVSIMEGCSKYCSFCVV 189
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP E ++ E+ L +GV+E+ LLGQNVN+Y ++PG + +
Sbjct: 190 PYTRGEEVSRPFEDVLTEIAHLATQGVREINLLGQNVNAYRGA------MDPGPSNNTNP 243
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ LL R +F + R R+T+ HP +F D L+ RD P + ++
Sbjct: 244 APPPYADL--------GLLIRAIAQFESIGRIRFTTSHPLEFSDSLVEAYRDVPQLANHL 295
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GE++ + T+
Sbjct: 296 HLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIIGFPGESDTDFQKTM 355
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L+K +G+D ++ F YS R T A N D P+E+K+ RL L + +
Sbjct: 356 QLIKDIGFDQSFSFIYSRRPGTPA-SNLEDHTPDEIKRTRLEHLQKHINAYAADISKRMI 414
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
GTVQ VLVEGP+KK P+ EL GK++ V F
Sbjct: 415 GTVQTVLVEGPSKKNPN-ELTGKTENMRPVNF 445
>gi|83719624|ref|YP_441148.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
thailandensis E264]
gi|167617973|ref|ZP_02386604.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis Bt4]
gi|257140190|ref|ZP_05588452.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis E264]
gi|123537978|sp|Q2T101.1|MIAB_BURTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|83653449|gb|ABC37512.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis E264]
Length = 457
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 249/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDSPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K ++ G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPDLLIG-----------VGGCVASQEGASIVARAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ + G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRESGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ E+ L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGAH 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F LL + P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y L++K+R I P++ LS+D I GF GETE + T+ L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSLIRKLRAIRPNLSLSTDIIVGFPGETEADFDKTMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK RL L E+ + S +G V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLADDTPREVKLERLQHLQATIEENVARISQSMLGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|399890153|ref|ZP_10776030.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
arbusti SL206]
Length = 442
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/452 (38%), Positives = 253/452 (55%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y ET+GCQMN D E + ++K +GY + + ++A++I NTC +R+ AE KV+ L
Sbjct: 7 KFYIETWGCQMNEEDSEKLSGMLKLSGYEKTED-KKSADLIIFNTCCVRENAEQKVFGNL 65
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAY 194
W LK +KN P I+ + GCM ++ + + I+ VD++ G
Sbjct: 66 ---WTLKVVKEKN----------PNLIIAICGCMMQQDDMANTIIKKFPFVDIIFGTHNS 112
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPV-RISKNSVTAFVSVMRGCNNMCSFCIV 253
LP L V +K I + E+ + PV R+SK + AFV++M GCNN C++C+V
Sbjct: 113 HMLPEYLNRVKQEEKSIIEIWDKEKGIVEGLPVDRLSK--IKAFVTIMYGCNNFCTYCVV 170
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+ RGRERSR + I EV +L KEG KE+TLLGQNVNSY KE+ P
Sbjct: 171 PYVRGRERSRTPDDIENEVKQLVKEGYKEITLLGQNVNSYG------KELSPA------- 217
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
L FADLL R++ R R+ + HPKD +++ +RD VC++IH
Sbjct: 218 ------------LDFADLLRRINEVDGIERIRFMTSHPKDLSFKVVEAIRDSKKVCEHIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G+S +L++M R Y RE Y+DL++ I++ IP++ LS+D I GF GETEE+ TL
Sbjct: 266 LPVQSGSSRLLKKMNRHYDREYYIDLIKNIKREIPNIALSTDIIVGFPGETEEDFQYTLD 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDD-VPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V YD A+ F YS R+ T A +D+ V EEVK R LI E + +
Sbjct: 326 LIREVEYDSAFTFLYSPRKGTPAAE--MDEMVSEEVKHDRFNRLISLVNEISAKRNKEYQ 383
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +K +++L+G++ G V F
Sbjct: 384 DKIVEVLVEGTSKNN-ESKLMGRTRTGKLVNF 414
>gi|335420369|ref|ZP_08551407.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salinisphaera
shabanensis E1L3A]
gi|334894728|gb|EGM32913.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salinisphaera
shabanensis E1L3A]
Length = 460
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 243/451 (53%), Gaps = 40/451 (8%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
+Q +++ +T+GCQMN D ++ +++ +E +N PE A++I +NTC+IR+ A KV+
Sbjct: 5 TQPKVFVQTWGCQMNEYDSAKMVEVLRKQRNAERVNTPEEADIILLNTCSIREKAAEKVF 64
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
+L + LK E + V I V GC+A + I + VD+V GP
Sbjct: 65 SQLGRWRELKAERPEIV------------IGVGGCVASQEGHAIRERAPFVDMVFGPQTL 112
Query: 195 RDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP +L+ V D G ++ + + + P R TAFVS+M GC+ CSFC+V
Sbjct: 113 HRLPEMLDAVQDNGAGVVDIAFPEIDKFDHMPPAR--AEGATAFVSIMEGCSKYCSFCVV 170
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP + ++ EV EL ++GVKE+TLLGQNVN Y ME
Sbjct: 171 PYTRGEEISRPFDDVILEVAELAEQGVKEITLLGQNVNGYRGP--MED------------ 216
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
S+C + M + F +D + R RYT+ HP +F D L+ P + Y+H
Sbjct: 217 --GSICDLA-MLVEFVAEIDGIE------RIRYTTSHPLEFSDALIEAYARVPKLANYLH 267
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G+ +VL M+RGYT + + + + K+R++ PD+ LS+D I G GE E E T+
Sbjct: 268 LPVQSGSDSVLADMKRGYTADHFRERIAKLREVRPDISLSTDIIVGHPGEGEAEFEATMQ 327
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L++ + +D A+ F YS R T A + DD P EVK++RL L E Q +G
Sbjct: 328 LVEDMRFDAAFSFVYSKRPGTPAA-DMADDTPREVKKKRLARLQARIAEFNRQYMQDMIG 386
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
T+Q VLVE +K+ ++ G++D V F
Sbjct: 387 TIQRVLVERESKRG-GGQMAGRTDSNRWVNF 416
>gi|423711031|ref|ZP_17685351.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella washoensis Sb944nv]
gi|395414945|gb|EJF81380.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella washoensis Sb944nv]
Length = 457
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 237/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P +A++I +NTC IR+ A K++ L
Sbjct: 15 KVFIKTYGCQMNVYDSQRMTDSLSSQGYV-ATQTPNDADLILVNTCHIREKAAEKLYSDL 73
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E + +P I V GC+A+ +IL VD+V GP Y L
Sbjct: 74 GRLRIMRQE---------RTADNPLMIAVTGCVAQAEGREILRRAPTVDLVIGPQMYHRL 124
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K + T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 125 PDLLEQTKQGKKIVATDYAVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 184
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 185 YTRGSEISRSVEQITEEARQLIEAGVKEITLLGQNVNGWHGQSAN------GKTWRLGDL 238
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 239 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMPYLHL 281
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 282 PVQSGSDRILKAMNRQHKSVHYLHLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETIKL 341
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K V Y AY F YS R T +N+VD E VK RL L E S++
Sbjct: 342 IKQVQYSSAYSFKYSPRPGTIGATMKNHVD---EAVKDARLQHLQILLLEQQNAFLRSKI 398
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + ++VG+S
Sbjct: 399 GQTTDVLIEKAGRHS--GQMVGRS 420
>gi|229890698|sp|A9HZZ2.2|MIAB_BORPD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
Length = 480
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 243/452 (53%), Gaps = 41/452 (9%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
S ++Y T+GCQMN D + + +++ E+ + PE+A+VI NTC++R+ A+ KV+
Sbjct: 30 SARKLYIRTFGCQMNEYDSDKMADVLRGDQGLELTDNPEDADVILFNTCSVREKAQEKVF 89
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
L LK+ ++ G V GC+A + + I+ VDVV GP
Sbjct: 90 SDLGRVQHLKK-LNPDLVIG-----------VGGCVASQEGEAIVKRAPYVDVVFGPQTL 137
Query: 195 RDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP L+ G ++ E + + P RI TAFVS+M GC+ CSFC+V
Sbjct: 138 HRLPELIRRRRASGASQVDISFPEIEKFDALPPPRI--EGATAFVSIMEGCSKYCSFCVV 195
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP + ++ EV +L +GVKEVTLLGQNVN+Y G E+
Sbjct: 196 PYTRGEEVSRPFDDVLVEVADLADQGVKEVTLLGQNVNAYRGPMGDTGEIA--------- 246
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
FA LL+ + E P + R RYT+ HPK+ ++ + P + ++
Sbjct: 247 -------------DFATLLEYVH-EIPGIERIRYTTSHPKEMTQRMVDAYANLPKLVSFL 292
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q G+ VL M+RGYT + +V+++R P + LSSDFI GF GETEE+ T+
Sbjct: 293 HLPVQAGSDRVLAAMKRGYTTLEFKSVVRRLRAARPGLTLSSDFIVGFPGETEEDFDKTM 352
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ VG+D ++ F YS R T A + VDD P+EVK RRL +L + V
Sbjct: 353 KLIEDVGFDTSFSFIYSRRPGTPAA-DLVDDTPQEVKLRRLQQLQALINAQAAAIAQAMV 411
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
GT Q +LVEGP+++ P+ EL+G+++ V F
Sbjct: 412 GTRQRLLVEGPSRRDPN-ELMGRTENNRIVNF 442
>gi|53804481|ref|YP_113916.1| tRNA-i(6)A37 modification enzyme MiaB [Methylococcus capsulatus
str. Bath]
gi|81682096|sp|Q608N1.1|MIAB_METCA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|53758242|gb|AAU92533.1| tRNA-i(6)A37 modification enzyme MiaB [Methylococcus capsulatus
str. Bath]
Length = 458
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 243/455 (53%), Gaps = 54/455 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ET+GCQMN D + +++ + E+ PE A+V+ +NTC+IRD A+ KV+ +L
Sbjct: 4 KLYIETFGCQMNEYDSAKMRDLLEVSDSFELARSPEEADVLLLNTCSIRDKAQEKVFSQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
W + + V G V GC+A + + + VD+V GP L
Sbjct: 64 GR-WRPIKLRRPEVVIG-----------VGGCVASQEGEALQKRAPYVDIVFGPQTLHRL 111
Query: 198 PRLLEEV--------DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
P +LE+V D I +L E AD AFVSVM GC C+
Sbjct: 112 PSMLEQVRCERRPVVDVSFPAIEKFDALPEPRAD---------GPKAFVSVMEGCGKYCT 162
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
FC+VP+TRG E SRPV+ ++ E+ L ++GV+EV LLGQNVN+Y
Sbjct: 163 FCVVPYTRGEEISRPVDDVIAEIVALAEQGVREVNLLGQNVNAYRGV------------- 209
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
L++G + + + D +DR+ R+T+ HP +F D L+ RD P +
Sbjct: 210 -LADGGMADLALLMHYVAAVDGIDRI---------RFTTSHPVEFSDALIEAFRDIPQLV 259
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
++HLP Q+G+ +L M+RG+TR Y+ V K+R+I PD+ LSSDFI GF GET+E+
Sbjct: 260 SHLHLPVQSGSDRILRLMKRGHTRAEYMAKVAKLREIRPDLSLSSDFIVGFPGETDEDFE 319
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
DT+ L++ +G+D ++ F +S R T A DDVP E K+ RL L ++ +
Sbjct: 320 DTMALIEQLGFDQSFSFIFSARPGTPAA-AMADDVPPETKRARLARLQAKIADNAAKIGA 378
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
S VG++Q VLVEG ++K + EL G+++ V F
Sbjct: 379 SMVGSIQSVLVEGTSRKNFN-ELSGRTENNRVVNF 412
>gi|229134580|ref|ZP_04263390.1| hypothetical protein bcere0014_34890 [Bacillus cereus BDRD-ST196]
gi|229168512|ref|ZP_04296235.1| hypothetical protein bcere0007_34690 [Bacillus cereus AH621]
gi|423518409|ref|ZP_17494890.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus HuA2-4]
gi|423592285|ref|ZP_17568316.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD048]
gi|228614918|gb|EEK72020.1| hypothetical protein bcere0007_34690 [Bacillus cereus AH621]
gi|228648841|gb|EEL04866.1| hypothetical protein bcere0014_34890 [Bacillus cereus BDRD-ST196]
gi|401161136|gb|EJQ68504.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus HuA2-4]
gi|401230527|gb|EJR37034.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD048]
Length = 509
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E A+VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFST-EEADVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P I+ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLIIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I+KE+ L G +E+TLLGQNVN+Y +
Sbjct: 232 YTRGKERSRRPEDIIKEIRHLAANGYREITLLGQNVNAY------------------GKD 273
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F + + GL DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 274 FEDI----QYGL--GDLMDELR-KIDIARIRFTTSHPRDFDDHLIDVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKETIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L E +G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MQDNVPMEVKKERLQRLNTLVNEYAVNKNKRYIGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +K P+ L G + V F
Sbjct: 446 IVEVLVEGESKNNPEV-LAGYTRTNKLVNF 474
>gi|342732428|ref|YP_004771267.1| tRNA-i(6)A37 thiotransferase protein MiaB [Candidatus Arthromitus
sp. SFB-mouse-Japan]
gi|417961482|ref|ZP_12603896.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Candidatus Arthromitus sp. SFB-2]
gi|417969030|ref|ZP_12609995.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Candidatus Arthromitus sp. SFB-co]
gi|418016156|ref|ZP_12655721.1| tRNA-i(6)A37 methylthiotransferase [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372695|ref|ZP_12964787.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342329883|dbj|BAK56525.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Arthromitus
sp. SFB-mouse-Japan]
gi|345506491|gb|EGX28785.1| tRNA-i(6)A37 methylthiotransferase [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|380333250|gb|EIA23875.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Candidatus Arthromitus sp. SFB-2]
gi|380338601|gb|EIA27478.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Candidatus Arthromitus sp. SFB-co]
gi|380342364|gb|EIA30809.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 447
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 246/449 (54%), Gaps = 47/449 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ET+GCQMN D E + ++ + GYS N +A++I NTC +R+ AE KV L
Sbjct: 14 FIETWGCQMNEEDSEKLSGMLISMGYSSCEN-RNDADIIIFNTCCVRENAELKVHGNLGQ 72
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAER--LKDKILDADKMVDVVCGPDAYRDL 197
LK+ SK I V GCM ++ + +I VD++ G
Sbjct: 73 LKGLKK------------SKKDLIIAVCGCMMQQKGIPQEISKKYPFVDIIFGTHNLHKF 120
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADI-SPVRIS-KNSVTAFVSVMRGCNNMCSFCIVPF 255
P L V + I L +E +I + I K+S+ AFV++M GC+N C++CIVP
Sbjct: 121 PEYLNRVLMNDERI---LEIEAGSDEIIEGLTIDRKSSLKAFVTIMYGCDNFCTYCIVPQ 177
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
RGRE+SR E I+ E+ EL K+G KE+TLLGQNVNSY G+E++++
Sbjct: 178 VRGREKSRKSEDIINEIRELAKDGYKEITLLGQNVNSYG--KGLEEDID----------- 224
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
F LL +++ R RY + HPKDF D+L+ +M++ VC +HLP
Sbjct: 225 ------------FPKLLKKVNEVDGIERIRYMTSHPKDFSDDLIEVMKNCDKVCSQLHLP 272
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L M R Y +E YLD ++KI+ +IPD+ +++D I GF GETEE+ +TL L+
Sbjct: 273 VQSGSNRILRVMNRHYKKEEYLDKIKKIKSLIPDLAITTDIIVGFPGETEEDFEETLDLV 332
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V YD A+MF YS R+ T A + +P+EVK +R L+E + + + G +
Sbjct: 333 REVRYDSAFMFLYSNRKFTGADM-MPNQIPDEVKHKRFNRLVETVNQICAEINKTYEGKI 391
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG N K +T+L G++D G V F
Sbjct: 392 VKVLVEG-NSKNDETKLSGRTDNGKLVNF 419
>gi|404371210|ref|ZP_10976518.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Clostridium sp. 7_2_43FAA]
gi|226912664|gb|EEH97865.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Clostridium sp. 7_2_43FAA]
Length = 444
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 245/450 (54%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y ET+GCQMN D E + ++K+ GY++ ++ E A +I NTC +R+ AE+KV+ L
Sbjct: 9 KYYIETWGCQMNEEDSEKLSGMLKSVGYTKTESIEE-AGIIIYNTCCVRENAENKVFGNL 67
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCM--AERLKDKILDADKMVDVVCGPDAY 194
LK+ K+P I+ V GCM E + DKIL V+++ G
Sbjct: 68 GELKHLKK-------------KNPDLIIAVCGCMMQQEGMADKILKKFPHVNIIFGTHNA 114
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
P L V + + + E + P+ ++ V AFV++M GCNN C++C+VP
Sbjct: 115 YKFPEYLNRVKTEGVQVKEIFNKESEIVEGLPID-RESDVKAFVTIMYGCNNFCTYCVVP 173
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+ RGRERSR E I+ E+ +L +G KE+TLLGQNVNSY G+E++++
Sbjct: 174 YVRGRERSRKSEDIINEIKDLVSKGYKEITLLGQNVNSYG--KGLEEDID---------- 221
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FA LL +++ R R+ + HPKD +++ +++ +C+ IHL
Sbjct: 222 -------------FAKLLRKINEVDGLERVRFMTSHPKDLNKDVILAIKECDKLCEQIHL 268
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L++M R YT+E YL+LV I++ IPDV L++D I GF GETEE+ DTL L
Sbjct: 269 PVQSGSDRILKKMNRHYTKEYYLELVDMIKREIPDVSLTTDIIVGFPGETEEDFLDTLDL 328
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VGYD A+ F YS R T A ++ VP+ K R LI+ E + G
Sbjct: 329 VERVGYDSAFTFIYSRRNNTPADM-MLNQVPDADKHHRFDRLIKVVNEGVIKSNKVYEGK 387
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+K T+L G++ G V F
Sbjct: 388 TVEVLVEGPSKNDA-TKLTGRTRNGKLVNF 416
>gi|163857967|ref|YP_001632265.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
petrii DSM 12804]
gi|163261695|emb|CAP43997.1| conserved hypothetical protein [Bordetella petrii]
Length = 514
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 243/452 (53%), Gaps = 41/452 (9%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
S ++Y T+GCQMN D + + +++ E+ + PE+A+VI NTC++R+ A+ KV+
Sbjct: 64 SARKLYIRTFGCQMNEYDSDKMADVLRGDQGLELTDNPEDADVILFNTCSVREKAQEKVF 123
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
L LK+ ++ G V GC+A + + I+ VDVV GP
Sbjct: 124 SDLGRVQHLKK-LNPDLVIG-----------VGGCVASQEGEAIVKRAPYVDVVFGPQTL 171
Query: 195 RDLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP L+ G ++ E + + P RI TAFVS+M GC+ CSFC+V
Sbjct: 172 HRLPELIRRRRASGASQVDISFPEIEKFDALPPPRI--EGATAFVSIMEGCSKYCSFCVV 229
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP + ++ EV +L +GVKEVTLLGQNVN+Y G E+
Sbjct: 230 PYTRGEEVSRPFDDVLVEVADLADQGVKEVTLLGQNVNAYRGPMGDTGEIA--------- 280
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
FA LL+ + E P + R RYT+ HPK+ ++ + P + ++
Sbjct: 281 -------------DFATLLEYVH-EIPGIERIRYTTSHPKEMTQRMVDAYANLPKLVSFL 326
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q G+ VL M+RGYT + +V+++R P + LSSDFI GF GETEE+ T+
Sbjct: 327 HLPVQAGSDRVLAAMKRGYTTLEFKSVVRRLRAARPGLTLSSDFIVGFPGETEEDFDKTM 386
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ VG+D ++ F YS R T A + VDD P+EVK RRL +L + V
Sbjct: 387 KLIEDVGFDTSFSFIYSRRPGTPAA-DLVDDTPQEVKLRRLQQLQALINAQAAAIAQAMV 445
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
GT Q +LVEGP+++ P+ EL+G+++ V F
Sbjct: 446 GTRQRLLVEGPSRRDPN-ELMGRTENNRIVNF 476
>gi|167585516|ref|ZP_02377904.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ubonensis
Bu]
Length = 457
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 249/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K ++ G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPDLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDQRRASGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGSS 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ + P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDMYAKVPKLVNHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETE + + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDLIVGFPGETEADFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK +RL L E+ + S VG V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|114566504|ref|YP_753658.1| 2-methylthioadenine synthetase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122318431|sp|Q0AYB7.1|MIAB_SYNWW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|114337439|gb|ABI68287.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 445
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/427 (36%), Positives = 238/427 (55%), Gaps = 42/427 (9%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNV D E + +++ +G+++ ++ E A++I NTC++R AE+KV+ +L
Sbjct: 15 TYGCQMNVRDSETIAGLLEGSGFNQAEDLSE-ADLIVFNTCSVRHSAENKVYGKLGEIAS 73
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLG-CMAERLKDKILDADKMVDVVCGPDAYRDLPRLL 201
LK+ K P ++ G CMA+ + + + VDVV G +LP L+
Sbjct: 74 LKK-------------KRPELLIAFGGCMAQLPEVRQKLKKRGVDVVFGTHNIHELPYLI 120
Query: 202 EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRER 261
+ + + E + + P K ++AFV++M GCNN CS+CIVP+TRGRER
Sbjct: 121 ARAKEKRSPVFEVWEKEGSIVEPLP-SCRKPGLSAFVNIMFGCNNFCSYCIVPYTRGRER 179
Query: 262 SRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKV 321
SR + I++E++EL G KEVTLLGQNVNSY G+ +++E
Sbjct: 180 SRKADDIIRELEELAAAGYKEVTLLGQNVNSYG--RGLGEKIE----------------- 220
Query: 322 KKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNS 381
FADLL R + R R+T+ HPKD D LL + + +C++IH P Q G++
Sbjct: 221 ------FADLLYRANSVAGIERIRFTTSHPKDVSDRLLQAIAECEKLCEHIHAPLQAGSN 274
Query: 382 AVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYD 441
+L+RM R Y+RE YL LV+++R +P V ++SD I GF GETEE+ +TL +++ V +D
Sbjct: 275 RILQRMNRNYSREHYLKLVERMRHYVPGVSITSDLIVGFPGETEEDFLETLDMVERVRFD 334
Query: 442 MAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVE 501
A+ F YS R T A + +P E K++RL L + + G++Q VLVE
Sbjct: 335 AAFTFLYSQRSGTRAA-ELAEQIPLEEKKQRLERLNRRQYQIATEINQELQGSIQEVLVE 393
Query: 502 GPNKKAP 508
GP+K P
Sbjct: 394 GPSKTNP 400
>gi|393777343|ref|ZP_10365635.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ralstonia sp.
PBA]
gi|392715684|gb|EIZ03266.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ralstonia sp.
PBA]
Length = 456
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 161/451 (35%), Positives = 247/451 (54%), Gaps = 40/451 (8%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q +++ +T+GCQMN D + + ++ A + PE+A+VI NTC++R+ A+ KV+
Sbjct: 6 QKKVFIKTFGCQMNEYDSDKMADVLNAAEGMIPTDRPEDADVILFNTCSVREKAQEKVFS 65
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L LK+E K ++ G V GC+A + I+ VDVV GP
Sbjct: 66 DLGRMRLLKQE-KPDLVIG-----------VGGCVASQEGASIVARAPYVDVVFGPQTLH 113
Query: 196 DLPRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +LE+ G+ ++ E + + P R+ TAFVS+M GC+ CS+C+VP
Sbjct: 114 RLPDMLEKRRATGRSQVDISFPEIEKFDHLPPARV--EGATAFVSIMEGCSKYCSYCVVP 171
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
FTRG E SRP + ++ EV L ++GV+EVTLLGQNVN+Y M ++ A+
Sbjct: 172 FTRGEEVSRPFDDVLAEVAGLAEQGVREVTLLGQNVNAYR--GAMTRDASELAD------ 223
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
FA L++ ++ E P + R RYT+ HPK+F L+ P + ++H
Sbjct: 224 -------------FALLIEYVA-EIPGIERIRYTTSHPKEFTPRLIETYAKVPKLVNHLH 269
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q G+ +L M+RGYT Y +++K+R I PD+ LSSDFI GF GET+++ +
Sbjct: 270 LPVQHGSDRILMAMKRGYTILEYKSIIRKLRAIRPDISLSSDFIVGFPGETDDDFDKMMD 329
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L+++ G+D ++ F +S R T A N DD P VK +RL L + + +S VG
Sbjct: 330 LIESTGFDTSFSFIFSPRPGTPAA-NLADDTPHAVKLKRLQHLQATIEANVQRISESMVG 388
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+VQ +LVEG +K P+ EL G+++ V F
Sbjct: 389 SVQRILVEGAARKDPN-ELSGRTENNRVVNF 418
>gi|77747710|ref|NP_779964.2| (dimethylallyl)adenosine tRNA methylthiotransferase [Xylella
fastidiosa Temecula1]
gi|182682396|ref|YP_001830556.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xylella
fastidiosa M23]
gi|386083729|ref|YP_006000011.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xylella
fastidiosa subsp. fastidiosa GB514]
gi|417558639|ref|ZP_12209601.1| 2-methylthioadenine synthetase [Xylella fastidiosa EB92.1]
gi|229891033|sp|B2I8U1.1|MIAB_XYLF2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229891222|sp|Q87AP4.2|MIAB_XYLFT RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|182632506|gb|ACB93282.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Xylella fastidiosa M23]
gi|307578676|gb|ADN62645.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xylella
fastidiosa subsp. fastidiosa GB514]
gi|338178719|gb|EGO81702.1| 2-methylthioadenine synthetase [Xylella fastidiosa EB92.1]
Length = 497
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 243/452 (53%), Gaps = 32/452 (7%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
S+G+++ +T+GCQMN D + ++ E+ + PE A++I INTC+IR+ A+ KV+
Sbjct: 46 SRGKLFIKTHGCQMNEYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVF 105
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
+L + LK + + I V GC+A + + I+ VD+V GP
Sbjct: 106 SQLGRWRALKTNGRDVI------------IGVGGCVASQEGETIVKRAPYVDLVFGPQTL 153
Query: 195 RDLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP ++ + + ++ E + + R S AFVS+M GC+ CSFC+V
Sbjct: 154 HRLPDMIRARREQNRPQVDISFPEIEKFDHLPTPRAEGPS--AFVSIMEGCSKYCSFCVV 211
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP E ++ E+ L +GV+E+ LLGQNVN+Y ++PG + +
Sbjct: 212 PYTRGEEVSRPFEDVLTEIAHLATQGVREINLLGQNVNAYRGA------MDPGPSNNTNP 265
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ LL R +F + R R+T+ HP +F D L+ RD P + ++
Sbjct: 266 APPPYADL--------GLLIRAIAQFESIGRIRFTTSHPLEFSDSLVEAYRDVPQLANHL 317
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GE++ + T+
Sbjct: 318 HLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIIGFPGESDTDFQKTM 377
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L+K +G+D ++ F YS R T A N D P+E+K+ RL L + +
Sbjct: 378 QLIKDIGFDQSFSFIYSRRPGTPA-SNLEDHTPDEIKRTRLEHLQKHINAYAADISKRMI 436
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
GTVQ VLVEGP+KK P+ EL GK++ V F
Sbjct: 437 GTVQTVLVEGPSKKNPN-ELTGKTENMRPVNF 467
>gi|33592184|ref|NP_879828.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bordetella
pertussis Tohama I]
gi|384203487|ref|YP_005589226.1| hypothetical protein BPTD_1035 [Bordetella pertussis CS]
gi|408416327|ref|YP_006627034.1| hypothetical protein BN118_2502 [Bordetella pertussis 18323]
gi|81578782|sp|Q7VZ86.1|MIAB_BORPE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|33571829|emb|CAE41341.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332381601|gb|AEE66448.1| hypothetical protein BPTD_1035 [Bordetella pertussis CS]
gi|401778497|emb|CCJ63927.1| conserved hypothetical protein [Bordetella pertussis 18323]
Length = 447
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 242/448 (54%), Gaps = 41/448 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y T+GCQMN D + + +++ E+ + PE+A+VI NTC++R+ A+ KV+ L
Sbjct: 1 MYIRTFGCQMNEYDSDKMADVLRADQGLELTDNPEDADVILFNTCSVREKAQEKVFSDLG 60
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
LK++ N+ G V GC+A + + I+ VDVV GP LP
Sbjct: 61 RVQHLKKQ-NPNLVIG-----------VGGCVASQEGEAIVKRAPYVDVVFGPQTLHRLP 108
Query: 199 RLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
L++ G ++ E + + P R+ + TAFVS+M GC+ CSFC+VP+TR
Sbjct: 109 DLIKRRRAQGVSQVDISFPEIEKFDALPPPRV--DGATAFVSIMEGCSKYCSFCVVPYTR 166
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRP + ++ EV +L +GVKEVTLLGQNVN+Y G E+
Sbjct: 167 GEEVSRPFDDVLLEVADLADQGVKEVTLLGQNVNAYRGAMGDSGEIA------------- 213
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA LL+ + E P + R RYT+ HPK+ ++ P + ++HLP
Sbjct: 214 ---------DFAMLLEYVH-EIPGIERIRYTTSHPKEMTQRMVDAYARLPKLVSFLHLPV 263
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G+ VL M+RGYT + +V+++R P + LSSDFI GF GETEE+ T+ L++
Sbjct: 264 QAGSDRVLAAMKRGYTALEFKSVVRRLRAARPSLTLSSDFIVGFPGETEEDFQKTMKLIE 323
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VG+D ++ F YS R T A + DD P++VK RRL +L + +GT Q
Sbjct: 324 DVGFDTSFSFVYSRRPGTPAA-DLHDDTPQDVKLRRLQQLQALINQQAAAIAQGMIGTRQ 382
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+++ P+ EL+G+++ V F
Sbjct: 383 RVLVEGPSRRDPN-ELMGRTENNRIVNF 409
>gi|395780925|ref|ZP_10461369.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella washoensis 085-0475]
gi|395416800|gb|EJF83162.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella washoensis 085-0475]
Length = 457
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 237/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P +A++I +NTC IR+ A K++ L
Sbjct: 15 KVFIKTYGCQMNVYDSQRMTDSLSSQGYV-ATQTPNDADLILVNTCHIREKAAEKLYSDL 73
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E + +P I V GC+A+ +IL VD+V GP Y L
Sbjct: 74 GRLRIMRQE---------RTADNPLMIAVTGCVAQAEGREILRRAPTVDLVIGPQMYHRL 124
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K + T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 125 PDLLEQTKQGKKIVATDYAVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 184
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 185 YTRGSEISRSVEQITEEARQLIEAGVKEITLLGQNVNGWHGQS------TNGKTWRLGDL 238
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 239 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMPYLHL 281
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 282 PVQSGSDRILKAMNRQHKSVHYLHLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETIKL 341
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K V Y AY F YS R T +N+VD E VK RL L E S++
Sbjct: 342 IKQVQYSSAYSFKYSPRPGTIGATMKNHVD---EAVKDARLQHLQILLLEQQNAFLRSKI 398
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + ++VG+S
Sbjct: 399 GQTTDVLIEKAGRHS--GQMVGRS 420
>gi|407972806|ref|ZP_11153719.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Nitratireductor indicus C115]
gi|407431577|gb|EKF44248.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Nitratireductor indicus C115]
Length = 470
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 244/459 (53%), Gaps = 40/459 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
AS+++ A + +++ +TYGCQMNV D + + + GY + E+A+++ +N
Sbjct: 11 ASDMTEAARAAQPEGKKVFVKTYGCQMNVYDSQRMSDALAADGYQPTDKI-EDADLVLLN 69
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC IR+ A KV+ L LK E R + + V GC+A+ +IL
Sbjct: 70 TCHIREKAAEKVYSELGRIRQLKEE--------RGRDGRETVVGVTGCVAQAEGREILRR 121
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFV 238
+VD+V GP Y LP +++ G+K + T ++E+ + + R + VTAF+
Sbjct: 122 APVVDLVIGPQTYHRLPNVVQRARGGEKIVETEYAIEDKFEHLPAPRRSAVRSRGVTAFL 181
Query: 239 SVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSG 298
+V GC+ C+FC+VP+TRG E SRPV IV E + L + GV+EVTLLGQNVN+++
Sbjct: 182 TVQEGCDKFCTFCVVPYTRGSEVSRPVAQIVAEAERLAEAGVREVTLLGQNVNAWH---- 237
Query: 299 MEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDE 357
E G W L E LL RL+ E P + R RYT+ HP+D D
Sbjct: 238 --GEGADGREWGLGE-----------------LLFRLA-EIPGLDRLRYTTSHPRDMDDA 277
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
L+ RD N+ Y+HLP Q+G+ +L+ M R +T + Y L+++IR+ PD+ +S DFI
Sbjct: 278 LIAAHRDLANLMPYLHLPVQSGSDRILKAMNRKHTGDDYRRLIERIREARPDIAMSGDFI 337
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GF GET+ + ADT+ L++ VGY A+ F YS R T + VPE VK RL L
Sbjct: 338 VGFPGETDADFADTMQLVRDVGYAQAFSFKYSPRPGTPGA-DLGSQVPENVKDERLQALQ 396
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
E S +G VL+E P ++ + VG+S
Sbjct: 397 ALLVEQQRAFAASLIGQTMDVLLEKPGRQP--GQRVGRS 433
>gi|71276464|ref|ZP_00652740.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
enzyme MiaB [Xylella fastidiosa Dixon]
gi|170731017|ref|YP_001776450.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xylella
fastidiosa M12]
gi|229891034|sp|B0U4P1.1|MIAB_XYLFM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|71162780|gb|EAO12506.1| Protein of unknown function UPF0004:tRNA-i(6)A37 modification
enzyme MiaB [Xylella fastidiosa Dixon]
gi|167965810|gb|ACA12820.1| bifunctional enzyme involved in thiolation and methylation of tRNA
[Xylella fastidiosa M12]
Length = 497
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 244/454 (53%), Gaps = 36/454 (7%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
S+G+++ +T+GCQMN D + ++ E+ + PE A++I INTC+IR+ A+ KV+
Sbjct: 46 SRGKLFIKTHGCQMNEYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVF 105
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
+L + LK + + I V GC+A + + I+ VD+V GP
Sbjct: 106 SQLGRWRALKTNGRDVI------------IGVGGCVASQEGETIVKRAPYVDLVFGPQTL 153
Query: 195 RDLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP ++ + + I+ E + + R S AFVS+M GC+ CSFC+V
Sbjct: 154 HRLPDMIRARREQNRPQIDISFPEIEKFDHLPTPRAEGPS--AFVSIMEGCSKYCSFCVV 211
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP E ++ E+ L +GV+E+ LLGQNVN+Y ++PG +
Sbjct: 212 PYTRGEEVSRPFEDVLTEIAHLATQGVREINLLGQNVNAYRGA------MDPGPS----- 260
Query: 314 GFNSMCKVKKMGLRFADL--LDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ADL L R +F + R R+T+ HP +F D L+ RD P +
Sbjct: 261 -----NNTNPAAPPYADLGLLIRAIAQFESIGRIRFTTSHPLEFSDSLVEAYRDIPQLAN 315
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
++HLP Q+G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GE++ +
Sbjct: 316 HLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIIGFPGESDTDFQK 375
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
T+ L++ +G+D ++ F YS R T A N D P+E+K+ RL L +
Sbjct: 376 TMQLIEDIGFDQSFSFIYSRRPGTPA-SNLEDHTPDEIKRTRLEHLQKHINAYAADISKR 434
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+GTVQ VLVEGP+KK P+ EL GK++ V F
Sbjct: 435 MIGTVQTVLVEGPSKKNPN-ELTGKTENMRPVNF 467
>gi|358448153|ref|ZP_09158658.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Marinobacter
manganoxydans MnI7-9]
gi|357227581|gb|EHJ06041.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Marinobacter
manganoxydans MnI7-9]
Length = 448
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 246/449 (54%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++K E+ + P++A+++ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLYIKTHGCQMNEYDSARMADLLKTGETVEMTDSPDDADILLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
WKK +SK P I+ V GC+A + I+D VD+V GP
Sbjct: 64 G-------RWKK------LKSKKPEMIIGVGGCVASQEGQAIIDRAPYVDMVFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTL-LSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ EV G+ + +S E + + +AFVS+M GC+ C+FC+VP+
Sbjct: 111 LPDMITEVRAKGNGVGVVDVSFPEIEKFDNLPEPGADGPSAFVSIMEGCSKYCTFCVVPY 170
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP + ++ EV L +GV+EV LLGQNVN+Y E G N L+E
Sbjct: 171 TRGEEVSRPADDVIAEVAHLASQGVREVNLLGQNVNAY------RGETHDGDNMDLAELI 224
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ + D +DR+ RYT+ HP +F D L+ + P + ++HLP
Sbjct: 225 ELIATI--------DGIDRI---------RYTTSHPVEFSDALIEVYERVPELVSHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+ +L M+RG+T Y ++++R+I PD+ SSDFI GF GETE++ DT+ L+
Sbjct: 268 VQSGSDRILAAMKRGHTALEYKSKLRRLRKIRPDISFSSDFIIGFPGETEKDFEDTMKLI 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+G+DM++ F YS R T A + DD P ++K++RL+ L + ++ VG+
Sbjct: 328 NDIGFDMSFSFVYSARPGTPA-SDLPDDTPMDIKKQRLSILQDRLNQNVMDISRKMVGST 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LV G +KK P E G+++ V F
Sbjct: 387 QRILVTGLSKKDP-GEYAGRTENNRIVNF 414
>gi|257456801|ref|ZP_05621985.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema vincentii ATCC
35580]
gi|257445807|gb|EEV20866.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema vincentii ATCC
35580]
Length = 456
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 158/454 (34%), Positives = 253/454 (55%), Gaps = 47/454 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ + ETYGCQMN + + +++ G+ ++ ++ ++ +NTC++R AE +V+ RL
Sbjct: 2 KYFIETYGCQMNFAESAALEQLLRERGWEAAEDI-QHCNLLIVNTCSVRITAETRVFGRL 60
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F +K+ K I+++GCMA+RL D+I ++D V G
Sbjct: 61 GLFSAMKK-------------KQDFTIILMGCMAQRLHDEIKSKFPLLDYVVGMFERDQF 107
Query: 198 PRLLEEVDY-----GQKGINTLL-------SLEETYADISPVRISKNSVTAFVSVMRGCN 245
++ + V+ G N L S EE Y S ++ + +FV +M GCN
Sbjct: 108 TKIFDAVERETFWEGSVAGNAKLASFCPQSSNEERYY-FSERSYTEGTFQSFVPIMNGCN 166
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
N C++CIVP+ RGRE SRPVESI+ E+ L +GVKE+TLLGQNVNSY+ ++P
Sbjct: 167 NFCTYCIVPYIRGREISRPVESILDEITFLSGKGVKEITLLGQNVNSYHG-------IDP 219
Query: 306 GANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
+ +++ F ++ + D++ + R+ S HPKD DEL+ +M +
Sbjct: 220 TSGSKVN--FPALLRAVSQTCTKQDVIKWI---------RFISSHPKDLSDELIEVMAED 268
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETE 425
P VCK +HLP Q G+ VL RM RGYT E YL +V+K+R IP++ L++D + GF GET+
Sbjct: 269 PRVCKSLHLPVQNGSDEVLARMNRGYTVEQYLKIVEKLRNRIPNIVLTTDILIGFPGETQ 328
Query: 426 EEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG 485
E TL LM+ V +D A+M+ Y+ RE T A+ N+ D +P+ + RL ++I+ + T
Sbjct: 329 AEFEKTLDLMRTVQFDSAFMYHYNPREGTKAY-NFPDRIPDAERINRLQQVIDLQQSITD 387
Query: 486 QCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRG 519
+VG+ ++LVE ++ PD EL G +++G
Sbjct: 388 LKMQQRVGSTVMMLVESQSRNNPD-ELFGHTEQG 420
>gi|416937707|ref|ZP_11934211.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
sp. TJI49]
gi|325524861|gb|EGD02810.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
sp. TJI49]
Length = 457
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 247/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRASGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGSS 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVNHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETEE+ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK +RL L E+ + S VG V
Sbjct: 328 HDMSYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|422940017|ref|ZP_16967379.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|339890062|gb|EGQ79247.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
Length = 435
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 245/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY ++ +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DITEEIDNADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K+ + G V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE--KRGIIIG-----------VTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVKGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L +M RGYT+E YL LV KI+ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL +L+E + + +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIDESVKKERLQKLMEVQNKCSFSESSKYKDKIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 381 RVLVEGPSKKNKEV-LSGRTSTNKIVLF 407
>gi|162453546|ref|YP_001615913.1| hypothetical protein sce5270 [Sorangium cellulosum So ce56]
gi|229891000|sp|A9FST8.1|MIAB_SORC5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|161164128|emb|CAN95433.1| hypothetical protein sce5270 [Sorangium cellulosum So ce56]
Length = 498
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 236/438 (53%), Gaps = 46/438 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMNV+D E + +++ AGY+E + E A+V+ +NTC++R+ AE K+ +
Sbjct: 8 TFGCQMNVHDSERMHDVLRCAGYTEAGSADE-ADVLVLNTCSVREKAEQKLRSEVGRLAR 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
KRE V +VV GC+A++ +++L + +DVV GPD +LP LL
Sbjct: 67 WKRERADRV------------LVVAGCVAQQEGERLLKQMRAIDVVVGPDNIPELPGLLG 114
Query: 203 EVDYGQKGINTLLSLEETYADISPVRI-------------SKNSVTAFVSVMRGCNNMCS 249
++ G L + T D+ R + + TAFV+VM+GC+ CS
Sbjct: 115 DLAIGG------LPIARTVFDLDAPRFLVASPPSPSSSSSPRAAPTAFVTVMKGCDERCS 168
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
FCIVP TRG ER RP + IV E+ L G +EVTLLGQ VNSY D G PGA+
Sbjct: 169 FCIVPHTRGPERYRPSDEIVAEIAALVAAGTREVTLLGQTVNSYRDPLGALPRA-PGASA 227
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA LL R++ + P + R RYTSPHP+ L+ + P +
Sbjct: 228 DDPDESE-----------FAALLRRVAADVPGLARLRYTSPHPRHLTPSLVLAHAELPVL 276
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
+++H+P Q+G+ VL RM R YTR Y+ + + + +P + LS+D I GF GETE++
Sbjct: 277 PRHVHMPVQSGSDRVLRRMIRRYTRAEYVARTRALVEAVPGLTLSTDIIVGFPGETEDDF 336
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
A TL+L++ VG+ + F YS R T A + DDVPE VK RL L E
Sbjct: 337 AATLSLVREVGFKGLFGFKYSRRPHTPALK-LPDDVPEGVKGERLARLFEESEALLAAHL 395
Query: 489 DSQVGTVQLVLVEGPNKK 506
+ VGT Q VLVEG +K+
Sbjct: 396 SALVGTTQEVLVEGRDKE 413
>gi|116250164|ref|YP_766002.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium
leguminosarum bv. viciae 3841]
gi|123082073|sp|Q1MMB6.1|MIAB_RHIL3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|115254812|emb|CAK05886.1| putative MiaB protein (methylthiolation of isopentenylated A37
derivatives in rRNA) [Rhizobium leguminosarum bv. viciae
3841]
Length = 473
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 241/444 (54%), Gaps = 42/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + GY ++ E A+++ +NTC IR+ A KV+ L
Sbjct: 27 KVFIKTYGCQMNVYDSMRMSDALARDGYEPTEDM-EVADLVLLNTCHIREKAAEKVYSAL 85
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K KK A GR I V GC+A+ ++IL VDVV GP Y L
Sbjct: 86 GRLREMK---KKKAADGREM-----MIGVAGCVAQAEGEEILRRAPAVDVVIGPQTYHRL 137
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSVTAFVSVMRGCNNMCSFCIV 253
P L GQ+ ++T ++E+ + + P+ RI VTAF++V GC+ C+FC+V
Sbjct: 138 PEALRRAKQGQRVVDTEYAIEDKFEHL-PIAESRRIRARGVTAFLTVQEGCDKFCTFCVV 196
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SR V IV+E ++L GV+E+TLLGQNVN+++ G W L
Sbjct: 197 PYTRGSEVSRSVSQIVEEAEKLADSGVREITLLGQNVNAWHGAGSQ------GEAWSL-- 248
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
DLL RL+ E P + R RYT+ HP+D D L+ RD + Y+
Sbjct: 249 ---------------GDLLYRLA-EIPGLARLRYTTSHPRDMDDRLINAHRDLSALMPYL 292
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L+ M R +T YL L+++IR + PD+ LS DFI GF GET+E+ DTL
Sbjct: 293 HLPVQSGSDRILKAMNRRHTAAEYLALIERIRTVRPDIALSGDFITGFPGETDEDFKDTL 352
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V Y A+ F YS R T D VPEE+K RL L + + +S V
Sbjct: 353 RLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLERLQMLLLKQQQEFAESCV 411
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G +L+E P + P+ +L+G+S
Sbjct: 412 GKEIDLLLEKPG-RMPE-QLIGRS 433
>gi|423669348|ref|ZP_17644377.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VDM034]
gi|423674524|ref|ZP_17649463.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VDM062]
gi|401298475|gb|EJS04075.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VDM034]
gi|401310075|gb|EJS15408.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VDM062]
Length = 509
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E A+VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFST-EEADVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P I+ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLIIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I+KE+ L G +E+TLLGQNVN+Y +
Sbjct: 232 YTRGKERSRRPEDIIKEIRHLAANGYREITLLGQNVNAY------------------GKD 273
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F + + GL DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 274 FEDI----QYGL--GDLMDELR-KIDIARIRFTTSHPRDFDDHLIDVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKETIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L E +G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MQDNVPMEVKKERLQRLNTLVNEYGVNKNKRYIGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +K P+ L G + V F
Sbjct: 446 IVEVLVEGESKNNPEV-LAGYTRTNKLVNF 474
>gi|338706706|ref|YP_004673474.1| 2-methylthioadenine synthetase [Treponema paraluiscuniculi Cuniculi
A]
gi|335344767|gb|AEH40683.1| 2-methylthioadenine synthetase [Treponema paraluiscuniculi Cuniculi
A]
Length = 456
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 251/450 (55%), Gaps = 47/450 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGCQMNV + V ++ G+++ ++ + +V+ INTC++R AE +V+ RL
Sbjct: 4 FFETYGCQMNVAESASVEQLLLARGWTKAVDA-QTCDVLIINTCSVRITAETRVFGRLGL 62
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
F LK+ K I+++GCMA+RL DKI +D V G A+
Sbjct: 63 FSSLKK-------------KRAFFIILMGCMAQRLHDKIQQQFPRIDYVVGTFAHARFES 109
Query: 200 LLEEVDYGQKGINTLLSLE---ETYAD--ISPVRI-----SKNSVTAFVSVMRGCNNMCS 249
+ +E++ QK E E Y + +S R S+ S +FV +M GCNN CS
Sbjct: 110 IFQEIE--QKLTQKDYRFEFISERYREHPVSGYRFFASSYSEGSFQSFVPIMNGCNNFCS 167
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
FCIVP+ RGRE SR +++I++EVD L ++GV+E+TLLGQNVNSY G ++E
Sbjct: 168 FCIVPYVRGREISRDLDAILQEVDVLSEKGVREITLLGQNVNSYR---GRDREGNIVTFP 224
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
+L C+VK D++ R+ S HPKD D+L+ + +C
Sbjct: 225 QLLRHLVRRCEVK----------DQIKW------IRFVSSHPKDLSDDLIATIAQESRLC 268
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
+ +HLP Q G + VL+RMRR YTRE YL LV K++ +P+V LS+D + GF GETEE+
Sbjct: 269 RLVHLPVQHGANGVLKRMRRSYTRERYLSLVGKLKASVPNVALSTDILIGFPGETEEDFE 328
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
TL LM+ V +D A+M+ Y+ RE T A+ ++ D +P+ + RL +I +T +
Sbjct: 329 QTLDLMREVEFDSAFMYHYNPREGTPAY-DFPDRIPDATRIARLQRVIALQMSTTLKKMR 387
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRG 519
++VG VLVE ++ P+ EL G ++ G
Sbjct: 388 ARVGKTLPVLVESRSRNNPE-ELFGHTELG 416
>gi|86356033|ref|YP_467925.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium etli
CFN 42]
gi|123724853|sp|Q2KD88.1|MIAB_RHIEC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|86280135|gb|ABC89198.1| putative 2-methylthioadenine synthetase (miaB-like) protein
[Rhizobium etli CFN 42]
Length = 469
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 164/444 (36%), Positives = 241/444 (54%), Gaps = 42/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + GY ++ E A+++ +NTC IR+ A KV+ L
Sbjct: 23 KVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDM-EEADLVLLNTCHIREKAAEKVYSAL 81
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K KK A GR I V GC+A+ ++IL VDVV GP Y L
Sbjct: 82 GRLREMK---KKKAADGREM-----MIGVAGCVAQAEGEEILRRAPAVDVVIGPQTYHRL 133
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSVTAFVSVMRGCNNMCSFCIV 253
P L GQ+ ++T ++E+ + + PV +I VTAF++V GC+ C+FC+V
Sbjct: 134 PEALRRAKEGQRVVDTEYAIEDKFEHL-PVAESRKIRARGVTAFLTVQEGCDKFCTFCVV 192
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRPV IV+E ++L + GV+E+TLLGQNVN+++ G W L
Sbjct: 193 PYTRGSEVSRPVSQIVEEAEKLVEGGVREITLLGQNVNAWHGAGPR------GEAWSL-- 244
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
DLL RL+ E P + R RYT+ HP+D D L+ RD + Y+
Sbjct: 245 ---------------GDLLYRLA-EIPGLARLRYTTSHPRDMDDRLIAAHRDLRALMPYL 288
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L+ M R +T YL L+++IR + PD+ LS DFI GF GET+++ DTL
Sbjct: 289 HLPVQSGSDRILKAMNRRHTAAEYLSLIERIRAVRPDIALSGDFITGFPGETDKDFEDTL 348
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V Y A+ F YS R T D VPEE+K RL L + + +S +
Sbjct: 349 RLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLERLQALLLKQQQEFAESCI 407
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G +L+E P + +L+G+S
Sbjct: 408 GKEIDLLLEKPGRMP--GQLIGRS 429
>gi|49473881|ref|YP_031923.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bartonella
quintana str. Toulouse]
gi|81647252|sp|Q6G0N1.1|MIAB_BARQU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|49239384|emb|CAF25717.1| hypothetical protein BQ02140 [Bartonella quintana str. Toulouse]
Length = 458
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 238/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P +A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSKGYV-ATQTPNDADLILLNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++ R+ K P I V GC+A+ ++IL MVD+V GP Y L
Sbjct: 75 GRLRVMRQ--------ARTLDK-PLMIGVTGCVAQAEGNEILRRAPMVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K + T +E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PDLLEQTKQGKKIVETDYPVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN G ++ G WRL +
Sbjct: 186 YTRGAEISRSVEQITEEARQLIEAGVKEITLLGQNVN------GWHGQIANGKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSIHYLHLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETVKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K V Y AY F YS R T +N+VD E VK RL L E S++
Sbjct: 343 IKQVQYSSAYSFKYSPRPGTVGATMKNHVD---EAVKDARLQHLQVLLLEQQNAFLRSKI 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + ++VG+S
Sbjct: 400 GQTTDVLIEKVGRHS--GQMVGRS 421
>gi|85705226|ref|ZP_01036325.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. 217]
gi|85670099|gb|EAQ24961.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. 217]
Length = 446
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 239/445 (53%), Gaps = 41/445 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +TYGCQMNV D E + M AGY E + P A++I +NTC IR+ A KV+ L
Sbjct: 12 KLYIKTYGCQMNVYDSERMAEAMGGAGYVETQD-PAEADMILLNTCHIREKAAEKVYSEL 70
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
R++K + K KI V GC+A+ ++I+ +VD+V GP +Y L
Sbjct: 71 GRM----RQFKDD--------KPDLKIGVTGCVAQAEGEEIMRRQPLVDLVVGPQSYHRL 118
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P + +V G K ++T LE+ + + + TAF++V GC+ C+FC+VP+TR
Sbjct: 119 PEMEAQVRAGGKALDTDFPLEDKFDKLRHRPKAARGPTAFLTVQEGCDKFCAFCVVPYTR 178
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRPV +++E +L + GV+E+TLLGQNVN+Y+ G +W L+ +
Sbjct: 179 GSEVSRPVARVLEEARDLVERGVREITLLGQNVNAYHGAG-------EGGDWGLARLIWA 231
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ + D L+R+ R+T+ HP D D+L+ D + Y+HLP Q
Sbjct: 232 LNDI--------DGLERI---------RFTTSHPNDMDDDLIAAHGDCAKLMPYLHLPVQ 274
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L+RM R +T E+YL L+++IR PD+ +S DFI GF ETEE+ TL L++A
Sbjct: 275 SGSDKILKRMNRSHTAESYLRLIERIRAARPDILISGDFIVGFPEETEEDFQATLDLIEA 334
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y A+ F YS R T A V E VK RL L + +S VG
Sbjct: 335 VTYGYAFSFKYSTRPGTPAAERA--QVAEAVKTERLHRLQDLIARQQRAAQNSMVGRTVG 392
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
VL E P + ++VGKSD H V
Sbjct: 393 VLFEKPGRMP--GQMVGKSDYLHAV 415
>gi|295687475|ref|YP_003591168.1| MiaB family RNA modification enzyme [Caulobacter segnis ATCC 21756]
gi|295429378|gb|ADG08550.1| RNA modification enzyme, MiaB family [Caulobacter segnis ATCC
21756]
Length = 448
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 239/443 (53%), Gaps = 44/443 (9%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q R++ +TYGCQMNV D E + +++ GY V++ PE A+++ +NTC IR+ A KV+
Sbjct: 6 QKRLFIKTYGCQMNVYDSERMADVLRPLGYG-VVDDPEGADLVVLNTCHIREKATEKVYS 64
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L Y +K +K A GR I V GC+A+ +I+ K VD+V GP AY
Sbjct: 65 ELGYIKQMKD--RKAEAGGRM------TIAVAGCVAQAEGKEIMHRQKAVDLVVGPQAYH 116
Query: 196 DLPRLLEEVD--YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP L+ G++ + + +E + D P VTAF++V GC+ C+FC+V
Sbjct: 117 QLPELIARAHRATGER-LAADFAADEKF-DALPAERHVTGVTAFLTVQEGCDKFCTFCVV 174
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRPV IV+E L +GV+EVTLLGQNVN+Y+ G L++
Sbjct: 175 PYTRGGEWSRPVNDIVEEAKRLADQGVREVTLLGQNVNAYD-----------GDGSTLAK 223
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
+ ++ D LDR+ RYT+ HP+D D+L+ + P + Y+H
Sbjct: 224 LVRQLARI--------DGLDRI---------RYTTSHPRDMGDDLIEAHGELPELMPYLH 266
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q G +L+ M R +T E+Y+ L+++IR PD+ +S DFI GF GE + + TL
Sbjct: 267 LPVQAGGDRILKAMNRDHTAESYVRLIERIRAARPDIAMSGDFIVGFPGERDGDFEKTLD 326
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L++ VG+ A+ F YS R T A V EEVK RL L + E +QVG
Sbjct: 327 LVREVGFASAFSFKYSRRPGTPAS-AMPGQVEEEVKAERLERLNQLLDEQQRAFNAAQVG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKS 516
V VL E P + A ++VG+S
Sbjct: 386 KVLPVLFEKPGRHA--GQIVGRS 406
>gi|218961210|ref|YP_001740985.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Cloacamonas
acidaminovorans]
gi|167729867|emb|CAO80779.1| tRNA-i(6)A37 modification enzyme MiaB [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 427
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 241/433 (55%), Gaps = 52/433 (12%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y ETYGCQMNV D E++ SI+ AG+ EV + E A+++ NTC++R +AE +V R
Sbjct: 2 KFYIETYGCQMNVADSELIASILTKAGHQEVTQISE-ADLLLFNTCSVRGHAEERVLGR- 59
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP--KIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
+ + + K P KI V+GCMA+RL ++I VD V G D Y+
Sbjct: 60 -------------IQSENHRKKENPNLKIGVVGCMAQRLGEEINKEKLTVDFVIGVDQYQ 106
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L E +K I T L + Y I P N A++++MRGCNN CS+CIVP+
Sbjct: 107 HLPDILNE--ETEKTILTDLDETQLYKGIQPAY--HNDYCAYITIMRGCNNFCSYCIVPY 162
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
RGRERSR + I++E +G K++TLLGQNVNSY + EV
Sbjct: 163 VRGRERSRSWQDIIEETISAGNQGKKDITLLGQNVNSY-----LNGEV------------ 205
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F LL L+ E E+ R R+ + HPKD +EL+ ++ + +C++IHL
Sbjct: 206 -----------NFPRLLIILN-ELDEIYRLRFITSHPKDLSEELIEVLANSAKICEHIHL 253
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R YT + Y+ LV+K+ + IP++ +++D + GF GETE + DTL+L
Sbjct: 254 PVQSGSDNILKAMNRNYTVQHYISLVEKLHKFIPNIAITTDIMTGFPGETENDFQDTLSL 313
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
MK + +D A+ + +S R T A + VPE + RL ++I+ R+ + + Q+G
Sbjct: 314 MKTIEFDDAFCYKFSPRPGTTA-ETLSNQVPEAERLARLQQMIDLQRKISLKKNREQIGR 372
Query: 495 VQLVLVEGPNKKA 507
V +E +KK+
Sbjct: 373 KVEVYIESFSKKS 385
>gi|323138528|ref|ZP_08073596.1| RNA modification enzyme, MiaB family [Methylocystis sp. ATCC 49242]
gi|322396162|gb|EFX98695.1| RNA modification enzyme, MiaB family [Methylocystis sp. ATCC 49242]
Length = 482
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 252/475 (53%), Gaps = 48/475 (10%)
Query: 47 QSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYS 106
Q + S P+++ E +A G G++ ++YGCQMNV D + ++ GY+
Sbjct: 9 QGAKEISTPVSNAVETIEDVTAKG------GKVLVKSYGCQMNVYDATRMADLLGREGYA 62
Query: 107 EVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVV 166
E N E+A+++ +NTC IR+ A K++ L KRE A GR KIVV
Sbjct: 63 ETAN-EEDADLVILNTCHIREKAAEKIYSELGKLALTKRERD---AQGREM-----KIVV 113
Query: 167 LGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETY---AD 223
GC+A+ +++L + VD+V GP +Y LP LL + G++ +T ++E+ + D
Sbjct: 114 AGCVAQAEGEEVLKRQRAVDLVVGPQSYHRLPDLLRQAKDGRRVTDTEFAVEDKFHALPD 173
Query: 224 ISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEV 283
S +I V+AFV+V GC+ CSFC+VP+TRG E SRPV IV E L GV+E+
Sbjct: 174 PSRAQIRARGVSAFVTVQEGCDKFCSFCVVPYTRGAEVSRPVADIVAETRRLIDAGVREI 233
Query: 284 TLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMR 343
TL+GQNVN+Y + G W L A LL L+ R
Sbjct: 234 TLIGQNVNAYRGAD------DKGREWGL-----------------ARLLSHLADMDGVER 270
Query: 344 FRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKI 403
RYT+ HP D +L+ + Y+HLP Q+G+ +L+ M R +T YLD++ ++
Sbjct: 271 LRYTTSHPVDMAQDLIDAHESIGKLMPYVHLPVQSGSDRILKTMNRRHTGADYLDIITRL 330
Query: 404 RQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERT-HAHRNYVD 462
R+ PDV +SSDFI GF GET+ + +T+ L++ VG+ ++ F YS R T A R+ D
Sbjct: 331 RKARPDVAMSSDFIVGFPGETDADFEETMALVREVGFASSFSFKYSPRPGTPGAERD--D 388
Query: 463 DVPEEVKQRRLTELIEAFRESTGQCYDSQ-VGTVQLVLVEGPNKKAPDTELVGKS 516
+ EE K+ RL L +A E Q +++ VG VL E P + + ++ GKS
Sbjct: 389 QIDEEAKRERLAAL-QALLEEQRQAFNTATVGREIDVLFEKPGRH--EGQIAGKS 440
>gi|15639741|ref|NP_219191.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Treponema
pallidum subsp. pallidum str. Nichols]
gi|189025979|ref|YP_001933751.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Treponema
pallidum subsp. pallidum SS14]
gi|378973263|ref|YP_005221869.1| 2-methylthioadenine synthetase [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|378974330|ref|YP_005222938.1| 2-methylthioadenine synthetase [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|378975388|ref|YP_005223998.1| 2-methylthioadenine synthetase [Treponema pallidum subsp. pallidum
DAL-1]
gi|378982239|ref|YP_005230546.1| 2-methylthioadenine synthetase [Treponema pallidum subsp. pertenue
str. CDC2]
gi|384422250|ref|YP_005631609.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema pallidum subsp.
pallidum str. Chicago]
gi|408502610|ref|YP_006870054.1| 2-methylthioadenine synthetase [Treponema pallidum subsp. pallidum
str. Mexico A]
gi|6136574|sp|O83735.1|MIAB_TREPA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229891019|sp|B2S3Z3.1|MIAB_TREPS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|3323060|gb|AAC65721.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018554|gb|ACD71172.1| hypothetical protein TPASS_0754 [Treponema pallidum subsp. pallidum
SS14]
gi|291060116|gb|ADD72851.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Treponema pallidum subsp.
pallidum str. Chicago]
gi|374677588|gb|AEZ57881.1| 2-methylthioadenine synthetase [Treponema pallidum subsp. pertenue
str. SamoaD]
gi|374678658|gb|AEZ58950.1| 2-methylthioadenine synthetase [Treponema pallidum subsp. pertenue
str. CDC2]
gi|374679727|gb|AEZ60018.1| 2-methylthioadenine synthetase [Treponema pallidum subsp. pertenue
str. Gauthier]
gi|374680788|gb|AEZ61078.1| 2-methylthioadenine synthetase [Treponema pallidum subsp. pallidum
DAL-1]
gi|408475973|gb|AFU66738.1| 2-methylthioadenine synthetase [Treponema pallidum subsp. pallidum
str. Mexico A]
Length = 456
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 251/450 (55%), Gaps = 47/450 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGCQMNV + V ++ G+++ ++ + +V+ INTC++R AE +V+ RL
Sbjct: 4 FFETYGCQMNVAESASVEQLLLARGWTKAVDA-QTCDVLIINTCSVRITAETRVFGRLGL 62
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
F LK+ K I+++GCMA+RL DKI +D V G A+
Sbjct: 63 FSSLKK-------------KRAFFIILMGCMAQRLHDKIQQQFPRIDYVVGTFAHARFES 109
Query: 200 LLEEVDYGQKGINTLLSLE---ETYAD--ISPVRI-----SKNSVTAFVSVMRGCNNMCS 249
+ +E++ QK E E Y + +S R S+ S +F+ +M GCNN CS
Sbjct: 110 IFQEIE--QKLTQKDYRFEFISERYREHPVSGYRFFASSYSEGSFQSFIPIMNGCNNFCS 167
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
FCIVP+ RGRE SR +++I++EVD L ++GV+E+TLLGQNVNSY G ++E
Sbjct: 168 FCIVPYVRGREISRDLDAILQEVDVLSEKGVREITLLGQNVNSYR---GRDREGNIVTFP 224
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
+L C+VK D++ R+ S HPKD D+L+ + +C
Sbjct: 225 QLLRHLVRRCEVK----------DQIKW------IRFVSSHPKDLSDDLIATIAQESRLC 268
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
+ +HLP Q G + VL+RMRR YTRE YL LV K++ +P+V LS+D + GF GETEE+
Sbjct: 269 RLVHLPVQHGANGVLKRMRRSYTREQYLSLVGKLKASVPNVALSTDILIGFPGETEEDFE 328
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
TL LM+ V +D A+M+ Y+ RE T A+ ++ D +P+ + RL +I +T +
Sbjct: 329 QTLDLMREVEFDSAFMYHYNPREGTPAY-DFPDRIPDATRIARLQRVIALQMSTTLKKMR 387
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRG 519
++VG VLVE ++ P+ EL G ++ G
Sbjct: 388 ARVGKTLPVLVESRSRNNPE-ELFGHTELG 416
>gi|423714022|ref|ZP_17688281.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395421169|gb|EJF87425.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 458
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 238/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P +A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSQGYV-TTQTPNDADLILVNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E R+ K P I V GC+A+ +IL VD+V GP Y L
Sbjct: 75 GRLRVMRQE--------RTPDK-PLMIGVTGCVAQAEGSEILRRAPTVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K I T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PDLLEKAKQGKKVIETDYAVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN ++ S G WRL +
Sbjct: 186 YTRGAEISRSVEQITEEARQLIEAGVKEITLLGQNVNGWHGQSA------NGKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSIHYLQLIEKIRTARPDIAFSGDFIVGFPGETDEDFEETIKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K V Y AY F YS R T +N+VD E VK RL L E S++
Sbjct: 343 IKQVQYSSAYSFKYSPRPGTVGATMKNHVD---ETVKDARLQHLQVLLLEQQNAFLRSKI 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + +++G+S
Sbjct: 400 GQKTDVLIEKAGRHS--GQMIGRS 421
>gi|237741509|ref|ZP_04571990.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. 4_1_13]
gi|421145794|ref|ZP_15605631.1| MIAB protein [Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
gi|229429157|gb|EEO39369.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. 4_1_13]
gi|395487808|gb|EJG08726.1| MIAB protein [Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
Length = 435
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 243/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY +V +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DVTEEIDNADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVEGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L +M RGYT+E YL LV KI+ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL L+E + + + +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIEEAVKKERLQRLMEVQNKCSFEESSKYKDRIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 381 KVLVEGPSKKNKEV-LSGRTSTNKVVLF 407
>gi|330818257|ref|YP_004361962.1| 2-methylthioadenine synthetase [Burkholderia gladioli BSR3]
gi|327370650|gb|AEA62006.1| 2-methylthioadenine synthetase [Burkholderia gladioli BSR3]
Length = 457
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 247/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+IY +T+GCQMN D + ++ ++ + + PE+A+VI NTC++R+ A+ KV+ L
Sbjct: 4 KIYIKTFGCQMNEYDSDKMVDVLNASEGLVKTDRPEDADVILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E N+ G V GC+A + I+ VDVV GP L
Sbjct: 64 GRVRELK-EANPNLIVG-----------VGGCVASQEGAAIVARAPYVDVVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRASGRSQVDISFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ E+ L +GV+EVTLLGQNVN+Y GA L++G
Sbjct: 170 RGDEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYR-----------GA---LTQGSE 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ E P + R RYT+ HPK+F LL + P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-ELPGIERIRYTTSHPKEFSQRLLDVYARVPKLVNHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y L++K+R I PD+ LS+D I GF GETE + T+ L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSLIRKLRAIRPDLSLSTDIIIGFPGETEADFDKTMQLV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK +RL L E+ + S VG +
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVARISASMVGRI 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|254304069|ref|ZP_04971427.1| tRNA 2-methylthioadenosine synthase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|422339668|ref|ZP_16420626.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|148324261|gb|EDK89511.1| tRNA 2-methylthioadenosine synthase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|355370811|gb|EHG18190.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 435
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 243/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY +V +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DVTEEIDNADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVEGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L++M RGYT+E YL LV KI+ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILKKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTVDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL L+E + + +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIEESVKKERLQRLMEVQNKCSFDESSKYKDKIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 381 KVLVEGPSKKNKEV-LSGRTSTNKVVLF 407
>gi|398803267|ref|ZP_10562373.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Polaromonas sp. CF318]
gi|398097146|gb|EJL87458.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Polaromonas sp. CF318]
Length = 451
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 241/449 (53%), Gaps = 39/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + + +++ A E E A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVFIKTFGCQMNEYDSDKMSDVLRAAEGYEPTQDMEQADLILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK +K V G V GC+A + I+ VDVV GP L
Sbjct: 64 GRVKHLK---EKGVLIG-----------VGGCVASQEGAAIIQRAPYVDVVFGPQTLHRL 109
Query: 198 PRLL-EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++L G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 110 PQMLASRARLGKPQVDISFPEIEKFDHLPPARVEGAS--AFVSIMEGCSKYCSYCVVPYT 167
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP E ++ EV L +GVKEVTLLGQNVN+Y GM+K+ GA
Sbjct: 168 RGEEVSRPFEDVLVEVAGLADQGVKEVTLLGQNVNAYRGPMGMDKK--SGAEI------- 218
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
FA LL+ +S + P + R RY + HP +F L+ P + ++HLP
Sbjct: 219 ---------ADFATLLEYVS-DIPGIERIRYVTSHPNEFTQSLIDAYARLPKLVNHLHLP 268
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y V+K+R I PD+ +SSDFI GF GETE++ + L+
Sbjct: 269 VQHGSDRILMAMKRGYTAMEYKSTVRKLRAIRPDLAMSSDFIVGFPGETEDDFNKLMKLI 328
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+GYD ++ F YS R T A + DD P EVK RRL L +S S+ GTV
Sbjct: 329 DEIGYDTSFSFIYSPRPGTPAAALH-DDTPHEVKLRRLQHLQATLDDSVRAISASRQGTV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LVEG ++K P TEL+G+++ V F
Sbjct: 388 QRILVEGASRKDP-TELMGRTECNRVVNF 415
>gi|402490601|ref|ZP_10837390.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium sp.
CCGE 510]
gi|401810627|gb|EJT03000.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium sp.
CCGE 510]
Length = 469
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/444 (36%), Positives = 240/444 (54%), Gaps = 42/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + GY ++ E A+++ +NTC IR+ A KV+ L
Sbjct: 23 KVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDM-EEADLVLLNTCHIREKAAEKVYSAL 81
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K K+ A GR I V GC+A+ ++IL VDVV GP Y L
Sbjct: 82 GRLRDMK---KRKAADGREM-----MIGVAGCVAQAEGEEILRRAPAVDVVIGPQTYHRL 133
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSVTAFVSVMRGCNNMCSFCIV 253
P L GQ+ ++T +LE+ + + P+ +I VTAF++V GC+ C+FC+V
Sbjct: 134 PEALRRAKEGQRVVDTEYALEDKFKHL-PIAESRKIRARGVTAFLTVQEGCDKFCTFCVV 192
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRPV IV+E ++L GV+E+TLLGQNVN+++ G W L
Sbjct: 193 PYTRGSEVSRPVSQIVEEAEKLADSGVREITLLGQNVNAWHGAGPQ------GEAWSL-- 244
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
DLL RL+ E P + R RYT+ HP+D D L+ RD + Y+
Sbjct: 245 ---------------GDLLYRLA-EIPGLARLRYTTSHPRDMDDRLINAHRDLRALMPYL 288
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L+ M R +T YL L+ +IR + PD+ LS DFI GF GET+ + DTL
Sbjct: 289 HLPVQSGSDRILKAMNRRHTAAEYLTLIARIRAVRPDIALSGDFITGFPGETDADFEDTL 348
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V Y A+ F YS R T D VPEE+K RL L + + +S +
Sbjct: 349 RLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLERLQALLVKQQQEFAESCI 407
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G +L+E P + P+ +L+G+S
Sbjct: 408 GKEIDLLLEKPG-RMPE-QLIGRS 429
>gi|297544628|ref|YP_003676930.1| MiaB family RNA modification protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842403|gb|ADH60919.1| RNA modification enzyme, MiaB family [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 471
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 246/429 (57%), Gaps = 46/429 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMNV+D E + +++ GY N+ E A+V+ NTCA+R++AE +V R++
Sbjct: 36 ETYGCQMNVHDSEKLAGMLEKMGYKYTENL-EQADVLLFNTCAVREHAEIRVLGRVSQMK 94
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRDLP 198
LK +++P I+ V GCM + + + I + +D+V G P
Sbjct: 95 ELK-------------ARNPNLIIGVSGCMMQEKNVVEAIKEKYSYIDIVFGTHNIYKFP 141
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LL E Q + ++ + + PV+ N + A+V+++ GCNN C++CIVP+TRG
Sbjct: 142 QLLWEALNSQDIVIDVIEDTKNVIEELPVKRDSN-LKAWVNIIYGCNNFCTYCIVPYTRG 200
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE+SR E IV EV EL ++G KE+TLLGQNVNSY K+++
Sbjct: 201 REKSRKPEDIVAEVKELAQKGYKEITLLGQNVNSYG------KDLDEN------------ 242
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ FA LL +L+ +E E R R+ + HPKD DEL+Y MRD VC+++HLP Q
Sbjct: 243 -------ITFAKLLYKLNEIEGIE-RIRFMTSHPKDISDELIYAMRDLNKVCEHLHLPVQ 294
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
G++ +L++M R YT+E YL+++ K+R IPD+ +++D I GF GETEE+ +TL L++
Sbjct: 295 AGSNKILKKMNRKYTKEHYLEIIDKVRSNIPDIAITTDIIVGFPGETEEDFLETLDLVQR 354
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D AY F YS R T A N D V + VK RL LIE + + + G +
Sbjct: 355 VRFDAAYTFIYSKRAGTVA-ANMPDQVDDAVKHERLERLIELQNKISLEKSAELRGKIVE 413
Query: 498 VLVEGPNKK 506
VL+EG +K+
Sbjct: 414 VLIEGISKR 422
>gi|319406556|emb|CBI80198.1| bifunctional enzyme [Bartonella sp. 1-1C]
Length = 460
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/444 (34%), Positives = 240/444 (54%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + GY P +A++I INTC IR+ A K++ L
Sbjct: 17 KVFIKTYGCQMNVYDSQRMNDSLSAQGYIAT-QTPNDADLILINTCHIREKAAEKLYSDL 75
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++ GR+ K P I V GC+A+ ++IL VD + GP Y L
Sbjct: 76 GRLQIIRQ--------GRTHDK-PLMIGVTGCVAQAEGNEILRRAPTVDFIIGPQMYHRL 126
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL++V G+K + T ++E+ ++ + P + + ++AF++V GC+ C+FC+VP
Sbjct: 127 PELLKQVKQGKKVVETDYAVEDKFSHLPPHNKQAVRQRGISAFLTVQEGCDKFCTFCVVP 186
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR V+ I E +L + GVKE+TLLGQNVN+++ S G WRL +
Sbjct: 187 YTRGAEISRSVKQITAEAHQLIEAGVKEITLLGQNVNAWHGQS------IDGKTWRLGDL 240
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 241 LHHLAKID--GLK---------------RLRYTTNHPRDMDDSLIAAHRDLDILMPYLHL 283
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL+L+ KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 284 PVQSGSDRILKAMNRQHKSIHYLNLIDKIRAAKPDIAFSGDFIVGFPGETDEDFEETIKL 343
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K VGY AY F YS R T +N+VD E VK RL L + S++
Sbjct: 344 IKQVGYSSAYSFKYSPRPGTVGATMKNHVD---ETVKNTRLQHLQAILLDQQHTFLHSKI 400
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G +L+E + + +++G+S
Sbjct: 401 GQTTDILIEKIGRHS--GQMIGRS 422
>gi|326202162|ref|ZP_08192032.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
2782]
gi|325987957|gb|EGD48783.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
2782]
Length = 477
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 245/445 (55%), Gaps = 43/445 (9%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ET+GCQMN ND E + ++ GYSE + +++++I NTC +R+ AE KV+ L
Sbjct: 46 ETFGCQMNENDSERLSGMLSEMGYSEC-SERKDSDLIIFNTCCVRENAEQKVYGHLGALK 104
Query: 142 FLKREWKKNVATGRSQSKHPPKIVVLGCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK E N+ I + GCM ++ + + I K VD++ G P
Sbjct: 105 KLK-ETNPNLV-----------IAICGCMMQQKEVVEHIKKTYKHVDIIFGTHNLYKFPE 152
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL + + + + A+ P+ K+++ A+V+VM GC+N CS+CIVP+ RGR
Sbjct: 153 LLNTAITTRSTVIDVWDSTGSIAENMPIS-RKDNIKAWVTVMYGCDNFCSYCIVPYVRGR 211
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR +E I EV++L +G KE+TLLGQNVNSY K++E
Sbjct: 212 ERSRSLEEIKNEVEKLAVDGCKEITLLGQNVNSYG------KDLEGD------------- 252
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
L FA LL L+ R R+ + HPKD +EL+Y +RD VC+++HLP Q+G
Sbjct: 253 ------LTFAGLLRELNKIQGIERIRFMTSHPKDLSEELIYAIRDCEKVCEHLHLPVQSG 306
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S VL+ M R YT+E YL L++K++ IP + LS+D I GF GETEE+ +TL ++
Sbjct: 307 SSKVLDEMNRKYTKEQYLKLIEKVKSNIPGIALSTDIIVGFPGETEEDFDETLDVVAKAR 366
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+DMAY F YS R T A +N + VPE VK++R +L+E + + + D +G VL
Sbjct: 367 FDMAYTFLYSKRTGTPAAKN-PEQVPESVKKQRFDKLLELQNKISKEINDEFLGKEMEVL 425
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEG +K + T G++ V F
Sbjct: 426 VEGLSKSSKTT-YTGRTRENKIVNF 449
>gi|335040819|ref|ZP_08533940.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Caldalkalibacillus thermarum TA2.A1]
gi|334179254|gb|EGL81898.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Caldalkalibacillus thermarum TA2.A1]
Length = 509
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 253/446 (56%), Gaps = 47/446 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNV+D E + ++++ GY+ + E A+VI NTCAIR+ AE KV+ L
Sbjct: 74 TYGCQMNVHDSEHIAGLLESMGYTPTEDETE-ADVILYNTCAIRENAEDKVFGELGRLKR 132
Query: 143 LKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLP 198
LK E P+++ V GCM+ E + +KIL + VD++ G LP
Sbjct: 133 LKTE--------------KPELILGVCGCMSQEEAVVNKILRSYHHVDLIFGTHNIHRLP 178
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
LL + ++ + + S E + P + + + A+V++M GC+ C++CIVPFTRG
Sbjct: 179 VLLRDAILSKEMVIEVWSKEGDIIENLPQK-REGGIKAWVNIMYGCDKFCTYCIVPFTRG 237
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
+ERSR E ++ EV EL ++G KE+T+LGQNVN+Y + +RL+ F+ +
Sbjct: 238 KERSRRPEDVLAEVRELARQGYKEITVLGQNVNAYGKDFTDRR-------YRLANLFDDI 290
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
K+ + P R R+T+ HP DF DEL+ ++ N+ ++IHLP Q+
Sbjct: 291 RKI----------------DIP--RVRFTTSHPWDFDDELIEVLAKGGNLVEHIHLPVQS 332
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
GN+ +L+ M R YTRE YL+LV+KIR IP+V L++D I GF ETEE+ DTL+L+K V
Sbjct: 333 GNNEILKLMGRKYTREEYLELVRKIRAAIPNVSLTTDIIVGFPNETEEQFEDTLSLVKEV 392
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
+D A+ F YS R T A + D+VPE+VK+ RL L E + + ++ G V V
Sbjct: 393 EFDSAFTFIYSPRHGTPAAQ-MEDNVPEDVKKERLYRLNAVQNEISRRKNEALRGQVVEV 451
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +K PD L G++ V F
Sbjct: 452 LVEGESKNNPDV-LAGRTRTNKLVNF 476
>gi|257784577|ref|YP_003179794.1| MiaB family RNA modification protein [Atopobium parvulum DSM 20469]
gi|257473084|gb|ACV51203.1| RNA modification enzyme, MiaB family [Atopobium parvulum DSM 20469]
Length = 455
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/456 (36%), Positives = 248/456 (54%), Gaps = 54/456 (11%)
Query: 77 GRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
G+ Y +T+GCQMN++D E V +++ G +EV + ++A+++ TC++R+ A+ +++
Sbjct: 9 GKTYHIKTFGCQMNLHDTERVSGLLEACGCNEVSDT-DDADIVIFMTCSVRENADQRLYG 67
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPK----IVVLGCMAERLKDKILDADKMVDVVCGP 191
+ A+ + PP + + GC+A+R +K+ + VDVV G
Sbjct: 68 Q---------------ASAMVSAPTPPSGKRIVAIGGCIAQRDGEKLREKVPAVDVVFGT 112
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYA---DISPVRISKNSVTAFVSVMRGCNNMC 248
A LP LL G+ + EE D+ R + A+V +M GCNN C
Sbjct: 113 SALASLPALLTSAFRGENDRVAVDISEEGKGFSTDLPSNRAQQYH--AWVPIMTGCNNFC 170
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+++ E + L +GV+E+TLLGQNVNSY G + +P
Sbjct: 171 TYCIVPYVRGRERSRTFEAVIGECERLVADGVREITLLGQNVNSY----GRDLYGKP--- 223
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
RFA+LL + E R R+TS +PKD DE + M++ P V
Sbjct: 224 ------------------RFAELLRAVGQTGVE-RIRFTSSNPKDLTDETIAAMKETPAV 264
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
++HL Q+G++ VL++M R YTRE YLD+V ++R IP + LS+D I GF GETEE+
Sbjct: 265 MPHLHLAVQSGSTRVLKKMNRSYTREEYLDVVSRLRAAIPGLALSTDIIVGFPGETEEDF 324
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K GY AY F YS R T A + Y D+ P EV Q R L E + +
Sbjct: 325 EETLSLVKEAGYSSAYTFIYSKRPGTPAAK-YEDNTPHEVIQERFDRLAELVAQQAHEAN 383
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ T Q VLVEG +K+ DT +VG S++ V F
Sbjct: 384 QVDLNTTQAVLVEGTSKR-DDTVMVGHSEKNQTVHF 418
>gi|322513853|ref|ZP_08066934.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Actinobacillus ureae ATCC
25976]
gi|322120315|gb|EFX92257.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Actinobacillus ureae ATCC
25976]
Length = 475
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 249/450 (55%), Gaps = 42/450 (9%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + ++ + E+ N PE A+V+ +NTC+IR+ A+ KV+ +
Sbjct: 2 AKLHITTWGCQMNEYDSSKMADLLNSTHGLELTNKPEEADVLLLNTCSIREKAQEKVFSQ 61
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L W + WKK+ P I+ V GC+A + + I + VD+V GP
Sbjct: 62 LGR-W---KNWKKD---------KPELIIGVGGCVASQEGEHIRERAPFVDIVFGPQTLH 108
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ ++ G + I + E D P ++ TAFVS+M GCN CSFC+VP+
Sbjct: 109 RLPEMINKIRGGDRAIVDISFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCSFCVVPY 167
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y E F
Sbjct: 168 TRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYR-----------------GETF 210
Query: 316 NS-MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ +C ++ LR +D + R RYT+ HP +F D+++ + RD P + ++HL
Sbjct: 211 DGGICTFAEL-LRLVAAIDGID------RVRYTTSHPIEFTDDIIEVYRDTPELVSFLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G VL M+R +T Y +++K+R++ P++ +SSDFI GF GET E+ T+ +
Sbjct: 264 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V +DM++ F YS R T A + DD+ EE K+ RL L + Q + +GT
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAA-DLPDDISEEEKKERLARLQQRINHQAMQFSRAMLGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEGP+KK EL G+++ V F
Sbjct: 383 EQRVLVEGPSKKDI-MELTGRTENNRIVNF 411
>gi|421525818|ref|ZP_15972428.1| MIAB protein [Fusobacterium nucleatum ChDC F128]
gi|402258387|gb|EJU08859.1| MIAB protein [Fusobacterium nucleatum ChDC F128]
Length = 435
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 243/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY +V +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DVTEEIDNADAVFLNTCTVREGAATQIFGKLGELKS 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVEGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L +M RGYT+E YL LV KI++ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILRKMGRGYTKEKYLALVDKIKEKIPGVALTADIIVGFPGETEEDFLDTVDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL L+E + + +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIEESVKKERLQRLMEVQNKCSFDESSKYKDKIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 381 RVLVEGPSKKNKEV-LSGRTSTNKVVLF 407
>gi|115352797|ref|YP_774636.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
ambifaria AMMD]
gi|122322269|sp|Q0BC21.1|MIAB_BURCM RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|115282785|gb|ABI88302.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
AMMD]
Length = 457
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 247/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDQRRASGRAQVDISFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGST 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVSHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETEE+ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK +RL L E+ + S VG V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVARISRSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELSGRTENNRVVNF 414
>gi|167835506|ref|ZP_02462389.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis MSMB43]
gi|424902220|ref|ZP_18325736.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis MSMB43]
gi|390932595|gb|EIP89995.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
thailandensis MSMB43]
Length = 461
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 248/449 (55%), Gaps = 36/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K ++ G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPDLLIG-----------VGGCVASQEGASIVARAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ + G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRESGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ E+ L +GV+EVTLLGQNVN+Y G GA L G +
Sbjct: 170 RGDEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYRGKFG-------GA---LPAGAH 219
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F LL + P + ++HLP
Sbjct: 220 DVAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLP 271
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y L++K+R I P++ LS+D I GF GETE + T+ L+
Sbjct: 272 VQHGSDRILMAMKRGYTVLEYKSLIRKLRAIRPNLSLSTDIIVGFPGETEADFDKTMALV 331
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A + DD P VK RL L E+ + S VG V
Sbjct: 332 HEMSYDTSFSFIYSPRPGTPA-ASLADDTPRGVKLERLQHLQATIEENVARISQSMVGRV 390
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 391 ERILVEGPSRKDPN-ELAGRTENNRVVNF 418
>gi|241662041|ref|YP_002980401.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ralstonia
pickettii 12D]
gi|240864068|gb|ACS61729.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ralstonia pickettii 12D]
Length = 456
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 242/454 (53%), Gaps = 51/454 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMN D + + ++ A + PE+A+VI NTC++R+ A+ KV+ L
Sbjct: 3 KVFIKTYGCQMNEYDSDKMSDVLNAAEGLVPTDTPEDADVILFNTCSVREKAQEKVFSEL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK K ++ G V GC+A + I+ VDVV GP L
Sbjct: 63 GRVKALK-ALKPDLVVG-----------VGGCVASQEGASIVARAPYVDVVFGPQTLHRL 110
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L+ G+ ++ E + + P R+ + +AFVS+M GC+ CS+C+VP+T
Sbjct: 111 PDLIAARRRTGRSQVDVSFPEIEKFDHLPPARV--DGASAFVSIMEGCSKYCSYCVVPYT 168
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP + ++ EV L ++GV+EVTLLGQNVN+Y
Sbjct: 169 RGEEVSRPFDDVLAEVAGLAEQGVREVTLLGQNVNAY----------------------- 205
Query: 317 SMCKVKKMG-----LRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ KMG FA LL+ ++ E P + R RYT+ HPK+F L+ P +
Sbjct: 206 ----IGKMGDTSERADFALLLEYVA-EIPGIERIRYTTSHPKEFSSRLIEAYATNPKLVD 260
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
++HLP Q G+ +L M+RGYT Y ++K+R I P++ +++DFI GF GET+ + A
Sbjct: 261 HLHLPVQHGSDRILMAMKRGYTVLEYKSSIRKLRAIRPNISIATDFIVGFPGETDADFAK 320
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
T+ L+ +GYD ++ F YS R T A N DD P+ VK RL L E+ +
Sbjct: 321 TMDLIHEIGYDTSFSFIYSPRPGTPA-ANLPDDTPQAVKLERLKHLQATIEENVARISQG 379
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VG+VQ +LVEGP++K P TEL G+++ V F
Sbjct: 380 MVGSVQRILVEGPSRKDP-TELHGRTENNRVVNF 412
>gi|170698977|ref|ZP_02890035.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
IOP40-10]
gi|170136084|gb|EDT04354.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
IOP40-10]
Length = 457
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 247/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDQRRASGRAQVDISFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGST 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVSHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETEE+ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK +RL L E+ + S VG V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVARISRSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELSGRTENNRVVNF 414
>gi|110636243|ref|YP_676451.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chelativorans
sp. BNC1]
gi|122965426|sp|Q11BD9.1|MIAB_MESSB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|110287227|gb|ABG65286.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Chelativorans sp. BNC1]
Length = 475
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/455 (36%), Positives = 245/455 (53%), Gaps = 40/455 (8%)
Query: 66 SSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAI 125
SS G+ + +++ +TYGCQMNV D + + + GY +V E+A+++ +NTC I
Sbjct: 14 SSRAGTASRTDKKVFVKTYGCQMNVYDSQRMADALAAEGY-RATDVIEDADLVLLNTCHI 72
Query: 126 RDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMV 185
R+ A KV+ L LK E R++ + V GC+A+ +IL V
Sbjct: 73 REKAAEKVYSELGRIRVLKEE--------RAKQGRETVVGVAGCVAQAEGREILRRAPAV 124
Query: 186 DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADI-SPVRISKNS--VTAFVSVMR 242
D+V GP Y LP ++ G+K + T ++E+ + + +P R + S VTAF++V
Sbjct: 125 DLVIGPQTYHRLPSVVTRARAGEKIVETEYAVEDKFDHLPAPERTAVRSRGVTAFLTVQE 184
Query: 243 GCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKE 302
GC+ C+FC+VP+TRG E SRPV IV E + L + GV+E+TLLGQNVN+++ E
Sbjct: 185 GCDKFCTFCVVPYTRGAEVSRPVAQIVAEAERLAEAGVRELTLLGQNVNAWHG------E 238
Query: 303 VEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYI 361
G W L LL RL+ E P + R RYT+ HP+D +EL+
Sbjct: 239 GPDGREWGLGR-----------------LLFRLA-EIPGLDRLRYTTSHPRDMDEELIAA 280
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
RD + Y+HLP Q G+ +L+ M R +T YL L+++IR PD+ +S DFI GF
Sbjct: 281 HRDLIKLMPYLHLPVQAGSDRILKAMNRKHTAADYLRLIERIRAARPDIAMSGDFIVGFP 340
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
GET+ + DT+ +++ V Y A+ F YS R T + D VP+ VK RL L
Sbjct: 341 GETDRDFEDTMRIVRDVNYAQAFSFKYSPRPGTPGADMH-DQVPDAVKDERLQRLQALLA 399
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
E +S VGT +L+E P ++A +LVG+S
Sbjct: 400 EQQRAFGESLVGTEIDLLLEKPGRQA--GQLVGRS 432
>gi|190890046|ref|YP_001976588.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhizobium etli
CIAT 652]
gi|229890624|sp|B3PZB6.1|MIAB_RHIE6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|190695325|gb|ACE89410.1| putative 2-methylthioadenine synthetase (miaB-like) protein
[Rhizobium etli CIAT 652]
Length = 469
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 240/444 (54%), Gaps = 42/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + GY ++ E A+++ +NTC IR+ A KV+ L
Sbjct: 23 KVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDM-EEADLVLLNTCHIREKAAEKVYSAL 81
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K KK A GR I V GC+A+ ++IL VDVV GP Y L
Sbjct: 82 GRLREMK---KKKAADGREM-----MIGVTGCVAQAEGEEILRRAPAVDVVIGPQTYHRL 133
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSVTAFVSVMRGCNNMCSFCIV 253
P L GQ+ ++T ++E+ + + P+ +I VTAF++V GC+ C+FC+V
Sbjct: 134 PEALRRAQQGQRVVDTEYAIEDKFEHL-PIAESRKIRARGVTAFLTVQEGCDKFCTFCVV 192
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRPV IV+E ++L + GV+E+TLLGQNVN+++ G W L
Sbjct: 193 PYTRGSEVSRPVSQIVEEAEKLVEAGVREITLLGQNVNAWHGAGPR------GEAWSL-- 244
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
DLL RL+ E P + R RYT+ HP+D D L+ RD + Y+
Sbjct: 245 ---------------GDLLYRLA-EIPGLARLRYTTSHPRDMDDRLIEAHRDLRALMPYL 288
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L+ M R +T YL L+++IR + PD+ LS DFI GF GET+ + DTL
Sbjct: 289 HLPVQSGSDRILKAMNRRHTAAEYLSLIERIRTVRPDIALSGDFITGFPGETDADFEDTL 348
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V Y A+ F YS R T D VPEE+K RL L + + +S +
Sbjct: 349 RLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLERLQALLLKQQQEFAESCI 407
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G +L+E P + +L+G+S
Sbjct: 408 GKEIDLLLEKPGRMP--GQLIGRS 429
>gi|344996160|ref|YP_004798503.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Caldicellulosiruptor lactoaceticus 6A]
gi|343964379|gb|AEM73526.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Caldicellulosiruptor lactoaceticus 6A]
Length = 471
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 244/437 (55%), Gaps = 46/437 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNV+D E + ++ GY E N+ E A++I NTC++R++AE +V+ +
Sbjct: 42 TYGCQMNVHDSEKLAGMLNAMGYIETENIQE-ADLIIFNTCSVREHAESRVYGNIG---- 96
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAERLK--DKILDADKMVDVVCGPDAYRDLPR 199
R + K P I+ V GCM ++++ K+ +D++ G + P+
Sbjct: 97 ---------PLKRLKDKKPDLIIGVCGCMPQQVEVAQKLAKLFPFLDIIFGTKSLHKFPQ 147
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL +K + + E+ + P + V+AFV+++ GCNN CS+CIVP+ RGR
Sbjct: 148 LLYTAITEKKTVIDVSEDEDVVVEGIPTA-RRQGVSAFVNIIYGCNNFCSYCIVPYVRGR 206
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+ E+++L + GVKEVTLLGQNVNSY G
Sbjct: 207 ERSRRPEEIIYEIEQLAQNGVKEVTLLGQNVNSYGKDLGN-------------------- 246
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
G+ F LL++++ R R+ + HPKD DEL+ MRD VC++IHLP Q+G
Sbjct: 247 -----GITFPKLLEKVNEIKGIERIRFVTSHPKDLSDELIVAMRDLEKVCEHIHLPVQSG 301
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L+ M R YT+E YL LV+K++ IPD+ +++D I GF GET+E+ DTL + + V
Sbjct: 302 STRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDEDFEDTLDVCRKVE 361
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D AY F YS R T A + + VP+++K +R +L++ E + +G +L
Sbjct: 362 FDSAYTFIYSKRRGTPAEK-MPNQVPDDIKHQRFQQLVKLIEEIALKKNRQMLGKTYEIL 420
Query: 500 VEGPNKKAPDTELVGKS 516
++G +K+ + LVG++
Sbjct: 421 IDGRSKR--NNLLVGRT 435
>gi|319892314|ref|YP_004149189.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus pseudintermedius
HKU10-03]
gi|386319417|ref|YP_006015580.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
pseudintermedius ED99]
gi|317162010|gb|ADV05553.1| tRNA-i(6)A37 methylthiotransferase [Staphylococcus pseudintermedius
HKU10-03]
gi|323464588|gb|ADX76741.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus
pseudintermedius ED99]
Length = 516
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 258/454 (56%), Gaps = 46/454 (10%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I+ GY+ +V A+VI +NTCAIR+ AE+KV
Sbjct: 67 GKGRTFLIKTYGCQMNAHDTEVMAGILTALGYTPTEDV-NTADVILLNTCAIRENAENKV 125
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + +K+E P ++ V GCM+ E + +KIL + + VD++ G
Sbjct: 126 FGEIGNLKHIKQE-------------RPDCLIGVCGCMSQEESVVNKILKSYQNVDMIFG 172
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP++LEE + + + S E + P ++ + + A+V++M GC+ C++
Sbjct: 173 THNIHRLPQILEEAYLSKAMVVEVWSKEGDVIENLP-KVRQGRIKAWVNIMYGCDKFCTY 231
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
CIVPFTRG+ERSR E I++EV +L ++G +E+TLLGQNVN+Y K++E
Sbjct: 232 CIVPFTRGKERSRRPEDIIEEVRDLARQGYQEITLLGQNVNAYG------KDIED----- 280
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
L G + L D ++ P R R+T+ HP DF D ++ ++ + N+
Sbjct: 281 LEYGLGDL------------LADISKIDIP--RVRFTTSHPWDFTDRMIEVIAEGGNIVP 326
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+GN VL+ M R YTRE+YLDLV +I+ +PDV L++D I G+ ETE + +
Sbjct: 327 HIHLPVQSGNDQVLKIMGRKYTRESYLDLVARIKAAMPDVALTTDIIVGYPNETEAQFEE 386
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
TL+L +AVG++ AY + YS R+ T A + D+VP +VK+ RL L E + + +
Sbjct: 387 TLSLYEAVGFEHAYTYLYSQRDGTPAAK-MKDNVPTDVKKERLQRLNRLVGEYSSRALKA 445
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G VL EG +KK + L G +++ V F
Sbjct: 446 YEGETVRVLCEGASKK-DEAVLAGYTEKNKLVNF 478
>gi|319405110|emb|CBI78714.1| bifunctional enzyme [Bartonella sp. AR 15-3]
Length = 460
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 239/448 (53%), Gaps = 43/448 (9%)
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+S +++ +TYGCQMNV D + + + GY P +A++I INTC IR+ A K+
Sbjct: 13 NSPKKVFIKTYGCQMNVYDSQRMNDSLSTQGYIAT-QTPNDADLILINTCHIREKAAEKL 71
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDA 193
+ L +++ GR+ K P I V GC+A+ ++IL VD + GP
Sbjct: 72 YSDLGRLQIIRQ--------GRTHDK-PLMIGVTGCVAQAEGNEILRRAPTVDFIIGPQM 122
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSF 250
Y LP LL++V G+K + T ++E+ + + P + + ++AF++V GC+ C+F
Sbjct: 123 YHRLPELLKQVKQGKKVVETDYAVEDKFTQLPPHNKRAVQQRGISAFLTVQEGCDKFCTF 182
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
C+VP+TRG E SR V+ I E +L + GVKE+TLLGQNVN++ S G WR
Sbjct: 183 CVVPYTRGAEISRSVKQITDEARQLIEAGVKEITLLGQNVNAWRGQS------IDGKTWR 236
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
L + + + K+ GL+ R RYT+ HP+D D L+ RD +
Sbjct: 237 LGDLLHHLAKID--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMP 279
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
Y+HLP Q+G+ +L+ M R + YL L+ KIR PD+ S DFI GF GET+E+ +
Sbjct: 280 YLHLPVQSGSDRILKAMNRQHKSIHYLHLIDKIRAAKPDIAFSGDFIVGFPGETDEDFEE 339
Query: 431 TLTLMKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
T+ L+K VGY AY F YS R T +N+VD E VK RL L +
Sbjct: 340 TIKLIKQVGYSSAYSFKYSPRPGTVGATMKNHVD---ETVKNTRLQHLQTILLDQQHTFL 396
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKS 516
S++G VL+E + + ++VG+S
Sbjct: 397 HSKIGQTTDVLIEKIGRYS--GQMVGRS 422
>gi|260494842|ref|ZP_05814972.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_33]
gi|260198004|gb|EEW95521.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_33]
Length = 435
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 242/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY ++ +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DITEEIDNADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVKGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L +M RGYT+E YL LV KI+ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL L+E + + +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIDESVKKERLQRLMEVQNKCSFNESSKYKDKIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 381 RVLVEGPSKKNKEV-LSGRTSTNKIVLF 407
>gi|417303523|ref|ZP_12090576.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopirellula baltica
WH47]
gi|327540187|gb|EGF26778.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopirellula baltica
WH47]
Length = 479
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 241/448 (53%), Gaps = 53/448 (11%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y +T GCQMNV D E+V++ +K GY+ V++ P A+++ NTC+IR+ AE K + L
Sbjct: 8 VYIKTVGCQMNVLDSEMVIADLKRHGYT-VVDTPGEADLLLYNTCSIREQAEEKTYSALG 66
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
++++HP K + V+GCMA++ ++ I VD+V GP +
Sbjct: 67 KLK-------------ETKARHPEKTIGVMGCMAQKDQETIFRRAPFVDMVVGPGQLHAI 113
Query: 198 PRLLEEVDYGQKGINTLLSL-------------EETYADISPVRISKNSVTAFVSVMRGC 244
P +L +V G+ G +SL ET+ + + A++ + GC
Sbjct: 114 PDMLTKVTSGE-GRQIAVSLGRKDGKQTVVARSHETFDPLRDPTMRPTPFQAYLRIQIGC 172
Query: 245 NNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVE 304
+ C++C+VP TRG E+ R E IV E L ++G E+TLLGQ VNSY
Sbjct: 173 DKFCTYCVVPNTRGPEQGRSPEEIVSEARVLAEQGALEITLLGQTVNSYR---------- 222
Query: 305 PGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRD 364
R +G M A LL+RL R ++ + +PKD LL +RD
Sbjct: 223 ----HRGPDGETDM----------AGLLERLHDIDGLKRIKFVTNYPKDMTARLLETIRD 268
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
P V Y+H+PAQ+G+ AVL+RM+RGYT Y+++ ++I I+P+ +SSDFI GFCGET
Sbjct: 269 LPKVSPYLHVPAQSGSDAVLKRMKRGYTIADYMEMFERIETILPEASVSSDFIVGFCGET 328
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
+E+ ++ L++ + +++F YS+RE T A N +DDVP EVK R EL+ +
Sbjct: 329 DEDFQKSVKLIERCRFKNSFIFQYSVREGTKAAANLIDDVPREVKAARNNELLAVQDRIS 388
Query: 485 GQCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+ +G VLVEGP+KKA ++L
Sbjct: 389 KEDNQKLIGDTVEVLVEGPSKKADKSDL 416
>gi|237745063|ref|ZP_04575544.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. 7_1]
gi|289764728|ref|ZP_06524106.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. D11]
gi|423138435|ref|ZP_17126078.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Fusobacterium nucleatum subsp. animalis F0419]
gi|229432292|gb|EEO42504.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. 7_1]
gi|289716283|gb|EFD80295.1| tRNA 2-methylthioadenosine synthase [Fusobacterium sp. D11]
gi|371957800|gb|EHO75543.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Fusobacterium nucleatum subsp. animalis F0419]
Length = 435
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 242/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY ++ +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DITEEIDNADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVKGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L +M RGYT+E YL LV KI+ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL L+E + + +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIDESVKKERLQRLMEVQNKCSFNESSKYKDKIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 381 RVLVEGPSKKNKEV-LSGRTSTNKIVLF 407
>gi|440715617|ref|ZP_20896151.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopirellula baltica
SWK14]
gi|436439414|gb|ELP32868.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopirellula baltica
SWK14]
Length = 476
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 242/447 (54%), Gaps = 51/447 (11%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y +T GCQMNV D E+V++ +K GY+ V++ P A+++ NTC+IR+ AE K + L
Sbjct: 5 VYIKTVGCQMNVLDSEMVIADLKRHGYT-VVDTPGEADLLLYNTCSIREQAEEKTYSALG 63
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
++++HP K + V+GCMA++ ++ I VD+V GP +
Sbjct: 64 KLK-------------ETKARHPEKTIGVMGCMAQKDQETIFRRAPFVDMVVGPGQLHAI 110
Query: 198 PRLLEEVDYGQ-----------KGINTLLSL-EETYADISPVRISKNSVTAFVSVMRGCN 245
P +L +V G+ G T+++ ET+ + + A++ + GC+
Sbjct: 111 PDMLTKVTSGEGRQMAVSLGRKDGKQTVVARSHETFDPLRDPTMRPTPFQAYLRIQIGCD 170
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
C++C+VP TRG E+ R E IV E L ++G E+TLLGQ VNSY
Sbjct: 171 KFCTYCVVPNTRGPEQGRSPEEIVSEARVLAEQGALEITLLGQTVNSYR----------- 219
Query: 306 GANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
R +G M A LL+RL R ++ + +PKD LL +RD
Sbjct: 220 ---HRGPDGETDM----------AGLLERLHDIDGLKRIKFVTNYPKDMTARLLETIRDL 266
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETE 425
P V Y+H+PAQ+G+ AVL+RM+RGYT Y+++ ++I I+P+ +SSDFI GFCGET+
Sbjct: 267 PKVSPYLHVPAQSGSDAVLKRMKRGYTIADYMEMFERIETILPEASVSSDFIVGFCGETD 326
Query: 426 EEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG 485
E+ ++ L++ + +++F YS+RE T A N +DDVP EVK R EL+ +
Sbjct: 327 EDFQKSVKLIERCRFKNSFIFQYSVREGTKAAANLIDDVPREVKAARNNELLAVQDRISK 386
Query: 486 QCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+ +G VLVEGP+KKA ++L
Sbjct: 387 EDNQKLIGDTVEVLVEGPSKKADKSDL 413
>gi|163757739|ref|ZP_02164828.1| RNA modification enzyme, MiaB family protein [Hoeflea phototrophica
DFL-43]
gi|162285241|gb|EDQ35523.1| RNA modification enzyme, MiaB family protein [Hoeflea phototrophica
DFL-43]
Length = 480
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 231/442 (52%), Gaps = 38/442 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D E + + GY V +V E A+++ INTC IR+ A KV+ +L
Sbjct: 24 KVFVKTYGCQMNVYDSERMGDALSRDGYQPVDSV-EAADLVLINTCHIREKAAEKVYSQL 82
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK+ R+ + V GC+A+ ++++ +VDVV GP Y L
Sbjct: 83 GRLAQLKKR--------RNSEGGDLMVAVAGCVAQAEGEEMIRRAPVVDVVIGPQTYHRL 134
Query: 198 PRLLEEVDYGQKGINTLLSLEETY---ADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
P L + G++ + T E+ + D S I VTAF++V GC+ C+FC+VP
Sbjct: 135 PGALAKARNGERVVETEFPTEDKFDRLPDASAGTIRTRGVTAFLTVQEGCDKFCTFCVVP 194
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRPVE I+ E + L GV+EVTLLGQNVN+++ G W L E
Sbjct: 195 YTRGAEVSRPVERIMSEAERLAAAGVREVTLLGQNVNAWHGQG------SDGREWGLGEL 248
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + ++ + R RYT+ HP+D D L+ RD P + Y+HL
Sbjct: 249 VHRLAAIEGID-----------------RIRYTTSHPRDMDDALINAHRDLPELMPYLHL 291
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R +T Y+ LV++IR PD+ LS DFI GF GET+E+ DT+ L
Sbjct: 292 PVQSGSDRILKAMNRRHTAAEYIRLVERIRMARPDIALSGDFIVGFPGETDEDFEDTMRL 351
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V Y A+ F YS+R T V E VK RLT L E T VG
Sbjct: 352 IREVNYAAAFSFKYSIRPGTPGA-GMDGQVDEAVKSERLTRLQALINEQTRDFGRQCVGK 410
Query: 495 VQLVLVEGPNKKAPDTELVGKS 516
+L+E P + +LVG+S
Sbjct: 411 TADLLLEKPGRNT--DQLVGRS 430
>gi|172061651|ref|YP_001809303.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
ambifaria MC40-6]
gi|229890455|sp|B1YWB9.1|MIAB_BURA4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|171994168|gb|ACB65087.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
MC40-6]
Length = 457
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 247/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYIKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDQRRASGRAQVDISFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGST 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVSHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETEE+ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK +RL L E+ + S VG V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVARISRSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELSGRTENNRVVNF 414
>gi|422320536|ref|ZP_16401594.1| hypothetical protein HMPREF0005_04066 [Achromobacter xylosoxidans
C54]
gi|317404691|gb|EFV85083.1| hypothetical protein HMPREF0005_04066 [Achromobacter xylosoxidans
C54]
Length = 477
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 243/449 (54%), Gaps = 41/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y T+GCQMN D + + +++ E+ + PE+A+VI NTC++R+ A+ KV+ L
Sbjct: 30 KLYIRTFGCQMNEYDSDKMADVLRGDQGLELTDNPEDADVILFNTCSVREKAQEKVFSDL 89
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK+ N+ G V GC+A + + I+ VDVV GP L
Sbjct: 90 GRVQHLKK-TNPNLVIG-----------VGGCVASQEGEAIVKRAPYVDVVFGPQTLHRL 137
Query: 198 PRLLEEVDY-GQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L++ G+ ++ E + ++ P R+ TAFVS+M GC+ CSFC+VP+T
Sbjct: 138 PDLIQRRRAEGRSQVDISFPEIEKFDNMPPPRV--EGATAFVSIMEGCSKYCSFCVVPYT 195
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP + ++ EV +L +GVKEVTLLGQNVN+Y E+
Sbjct: 196 RGEEVSRPFDDVLVEVADLADQGVKEVTLLGQNVNAYRGRMSDSGEIAD----------- 244
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
FA LL+ + E P + R RYT+ HPK+ ++ P + ++HLP
Sbjct: 245 -----------FAMLLEYVH-EIPGIERIRYTTSHPKEMTQRMVDAYARLPKLVSFLHLP 292
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ VL M+RGYT + +V+++R PD+ LSSDFI GF GETEE+ T+ L+
Sbjct: 293 VQAGSDRVLAAMKRGYTTLEFKSVVRRLRAARPDLTLSSDFIVGFPGETEEDFEKTMKLI 352
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ VG+D ++ F YS R T A + D+ P++VK RRL L E + +GT
Sbjct: 353 EDVGFDTSFSFVYSRRPGTPAA-DLHDETPQDVKLRRLQRLQALINEQAAAIARNMIGTR 411
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LVEGP+++ P+ EL+G+++ V F
Sbjct: 412 QRLLVEGPSRRDPN-ELMGRTENNRIVNF 439
>gi|395783564|ref|ZP_10463413.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella melophagi K-2C]
gi|395425686|gb|EJF91846.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Bartonella melophagi K-2C]
Length = 458
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 236/447 (52%), Gaps = 43/447 (9%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
S +++ +TYGCQMN D + + + GY P +A++I +NTC IR+ A K++
Sbjct: 13 SSQKVFIKTYGCQMNTYDSQRMSDSLSAEGYV-TTQTPNDADLILVNTCHIREKAAEKLY 71
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +++ + S P I V GC+A+ D+IL VD++ GP Y
Sbjct: 72 SDLGRLRMIRQ---------KRASDKPLIIGVTGCVAQAEGDEILRRAPTVDLIVGPQMY 122
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFC 251
LP LL++ G+K + T ++E+ + + P + K V+AF+++ GC+ C+FC
Sbjct: 123 HRLPELLKQAKQGKKIVETNYAVEDKFTHLPPHNKHAVQKRGVSAFLTIQEGCDKFCTFC 182
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
+VP+TRG E SRPVE I E +L + GVKE+TLLGQNVN ++ S G WRL
Sbjct: 183 VVPYTRGAETSRPVEQITHEAIQLIEAGVKEITLLGQNVNGWHGQSA------NGKTWRL 236
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
+ + K+ GL+ R RYT+ HP+D D L+ RD + Y
Sbjct: 237 GDLLYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDMLMPY 279
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
+HLP Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T
Sbjct: 280 LHLPIQSGSDRILKAMNRQHKSIHYLRLIEKIRTARPDIAFSGDFIVGFPGETDEDFEET 339
Query: 432 LTLMKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
+ L+K VGY AY F YS R T A +++VD E VK RL L +
Sbjct: 340 IKLIKQVGYSSAYSFKYSPRPGTPGAAMKDHVD---ETVKNSRLQYLQALLLDQQHTFLR 396
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKS 516
S++G +L+E + ++VG+S
Sbjct: 397 SKIGQKTNILIEKSGRHL--GQMVGRS 421
>gi|421868499|ref|ZP_16300147.1| tRNA-i(6)A37 methylthiotransferase [Burkholderia cenocepacia H111]
gi|358071521|emb|CCE51025.1| tRNA-i(6)A37 methylthiotransferase [Burkholderia cenocepacia H111]
Length = 457
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 247/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRASGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LAAGSS 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVNHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETE++ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P +VK +RL L E+ + S VG V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLADDTPRDVKLKRLQHLQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|417110239|ref|ZP_11963574.1| putative 2-methylthioadenine synthetase (miaB-like) protein
[Rhizobium etli CNPAF512]
gi|327188593|gb|EGE55803.1| putative 2-methylthioadenine synthetase (miaB-like) protein
[Rhizobium etli CNPAF512]
Length = 482
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 254/482 (52%), Gaps = 50/482 (10%)
Query: 40 GLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSI 99
G +H+IA ++T L AP + + S +++ +TYGCQMNV D +
Sbjct: 6 GKNHYIA--AMTQDSALLQ-APEPMLRDGSNSR-----KVFIKTYGCQMNVYDSTRMSDA 57
Query: 100 MKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSK 159
+ GY ++ E A+++ +NTC IR+ A KV+ L +K KK A GR
Sbjct: 58 LARDGYEPTEDM-EEADLVLLNTCHIREKAAEKVYSALGRLREMK---KKKAADGREM-- 111
Query: 160 HPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEE 219
I V GC+A+ ++IL VDVV GP Y LP L GQ+ ++T ++E+
Sbjct: 112 ---MIGVTGCVAQAEGEEILRRAPAVDVVIGPQTYHRLPEALRRAQQGQRVVDTEYAIED 168
Query: 220 TYADISPV----RISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDEL 275
+ + P+ +I VTAF++V GC+ C+FC+VP+TRG E SRPV IV+E ++L
Sbjct: 169 KFEHL-PIAESRKIRARGVTAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAEKL 227
Query: 276 WKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL 335
+ GV+E+TLLGQNVN+++ G W L DLL RL
Sbjct: 228 VEAGVREITLLGQNVNAWHGAGPR------GEAWSL-----------------GDLLYRL 264
Query: 336 SLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTRE 394
+ E P + R RYT+ HP+D D L+ RD + Y+HLP Q+G+ +L+ M R +T
Sbjct: 265 A-EIPGLARLRYTTSHPRDMDDRLIEAHRDLRALMPYLHLPVQSGSDRILKAMNRRHTAA 323
Query: 395 AYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERT 454
YL L+ +IR + PD+ LS DFI GF GET+ + DTL L++ V Y A+ F YS R T
Sbjct: 324 EYLSLIDRIRTVRPDIALSGDFITGFPGETDADFEDTLRLVEEVRYAQAFSFKYSTRPGT 383
Query: 455 HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVG 514
D VPEE+K RL L + + +S +G +L+E P + +L+G
Sbjct: 384 PGA-ELKDQVPEEIKAERLERLQALLLKQQQEFAESCIGKEIDLLLEKPGRMP--GQLIG 440
Query: 515 KS 516
+S
Sbjct: 441 RS 442
>gi|15837508|ref|NP_298196.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Xylella
fastidiosa 9a5c]
gi|81547885|sp|Q9PEX2.1|MIAB_XYLFA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|9105825|gb|AAF83716.1|AE003930_6 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 497
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/452 (34%), Positives = 243/452 (53%), Gaps = 32/452 (7%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
S+G+++ +T+GCQMN D + ++ E+ + PE A++I INTC+IR+ A+ KV+
Sbjct: 46 SRGKLFIKTHGCQMNEYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVF 105
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
+L + LK + + I V GC+A + + I+ VD+V GP
Sbjct: 106 SQLGRWRALKTSGRDVI------------IGVGGCVASQEGEAIVKRAPYVDLVFGPQTL 153
Query: 195 RDLPRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP ++ + + ++ E + + R S AFVS+M GC+ CSFC+V
Sbjct: 154 HRLPDMIRARREQNRPQVDIRFPEIEKFDHLPTPRAEGPS--AFVSIMEGCSKYCSFCVV 211
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP E ++ E+ L +GV+E+ LLGQNVN+Y ++PG + +
Sbjct: 212 PYTRGEEVSRPFEDVLTEIAHLATQGVREINLLGQNVNAYRGA------MDPGPSNNTNP 265
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ LL R +F + R R+T+ HP +F D L+ RD P + ++
Sbjct: 266 APPPYADL--------GLLIRAIAQFESIGRIRFTTSHPLEFSDSLVEAYRDVPQLANHL 317
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L M+RGYT + ++K+R + PD+ +SSDFI GF GE++ + T+
Sbjct: 318 HLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIIGFPGESDTDFQKTM 377
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ +G+D ++ F YS R T A N D P+E+K+ RL L + +
Sbjct: 378 QLIEDIGFDQSFSFIYSRRPGTPA-SNLEDHTPDEIKRTRLEHLQKHINTYAADISKRMI 436
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
GTVQ VLVEGP+KK P+ EL GK++ V F
Sbjct: 437 GTVQTVLVEGPSKKNPN-ELTGKTENMRPVNF 467
>gi|399036367|ref|ZP_10733472.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium sp. CF122]
gi|398066026|gb|EJL57628.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium sp. CF122]
Length = 474
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/463 (36%), Positives = 245/463 (52%), Gaps = 45/463 (9%)
Query: 59 LAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVI 118
L PA E GS +++ +TYGCQMNV D + + GY E V E A+++
Sbjct: 7 LLPAPETDLRDGSNSR---KVFIKTYGCQMNVYDSTRMSDALARDGY-EPTEVLEEADLV 62
Query: 119 FINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKI 178
+NTC IR+ A KV+ L +K+E R++ I V GC+A+ ++I
Sbjct: 63 LLNTCHIREKAAEKVYSALGRLRDMKKE--------RNKEGREFMIGVAGCVAQAEGEEI 114
Query: 179 LDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSV 234
L VDVV GP Y LP L + GQ+ ++T +LE+ + D P+ +I V
Sbjct: 115 LRRAPAVDVVIGPQTYHRLPEALRKAKEGQRIVDTEYALEDKF-DHLPIAESKKIRSRGV 173
Query: 235 TAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN 294
T+F++V GC+ C+FC+VP+TRG E SR V IV+E +L + GV+E+TLLGQNVN+++
Sbjct: 174 TSFLTVQEGCDKFCTFCVVPYTRGSEVSRSVSQIVEEAQKLVEGGVREITLLGQNVNAWH 233
Query: 295 DTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKD 353
G W L DLL RL+ E P + R RYT+ HP+D
Sbjct: 234 GVGA------NGQEWTL-----------------GDLLYRLA-EIPGLARLRYTTSHPRD 269
Query: 354 FPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLS 413
D L+ RD + Y+HLP Q G+ +L+ M R +T YL LV++IR PD+ LS
Sbjct: 270 MDDRLIEAHRDLRALMPYLHLPVQAGSDRILKAMNRRHTAAEYLTLVERIRTARPDIALS 329
Query: 414 SDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRL 473
DFI GF GET+ + DTL L++ V Y A+ F YS R T D VPEE+K RL
Sbjct: 330 GDFIVGFPGETDRDFDDTLRLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERL 388
Query: 474 TELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
L + + +S VG + +L+E P + + +L+G+S
Sbjct: 389 ERLQALLLKQQQEFAESCVGKIIELLLEKPGRMS--QQLIGRS 429
>gi|78067490|ref|YP_370259.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
sp. 383]
gi|77968235|gb|ABB09615.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. 383]
Length = 498
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 266/494 (53%), Gaps = 46/494 (9%)
Query: 35 LPDGPG--LHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVND 92
PDG L Q + P+ D AP S ++A G ++ ++Y +T+GCQMN D
Sbjct: 4 FPDGFSCWLRAIRVQRTAVPIHPIDD-APRS--TTANGEPPMTK-KVYVKTFGCQMNEYD 59
Query: 93 MEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVA 152
+ ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L LK E K +
Sbjct: 60 SDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDLGRVRELK-EAKPGLL 118
Query: 153 TGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGI 211
G V GC+A + I+ VD+V GP LP++++ + G+ +
Sbjct: 119 IG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRLPQMIDARRESGRAQV 167
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
+ E + + P R+ S AFVS+M GC+ CS+C+VP+TRG E SRP++ ++ E
Sbjct: 168 DISFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYTRGDEVSRPLDDVLTE 225
Query: 272 VDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADL 331
V L +GV+EVTLLGQNVN+Y GA L+ G + + FA L
Sbjct: 226 VAGLADQGVREVTLLGQNVNAYR-----------GA---LAAGSSEIAD-------FATL 264
Query: 332 LDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRG 390
++ ++ + P + R RYT+ HPK+F L+ P + ++HLP Q G+ +L M+RG
Sbjct: 265 IEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVNHLHLPVQHGSDRILMAMKRG 323
Query: 391 YTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSM 450
YT Y +++K+R I PD+ LS+D I GF GETE++ + L+ + YD ++ F YS
Sbjct: 324 YTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALVHEMSYDTSFSFIYSP 383
Query: 451 RERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDT 510
R T A N DD P +VK +RL L E+ + S VG V+ +LVEGP++K P+
Sbjct: 384 RPGTPA-ANLHDDTPRDVKLKRLQHLQATIEENVARISQSMVGKVERILVEGPSRKDPN- 441
Query: 511 ELVGKSDRGHRVAF 524
EL G+++ V F
Sbjct: 442 ELAGRTENNRVVNF 455
>gi|221232993|ref|YP_002515429.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Caulobacter
crescentus NA1000]
gi|220962165|gb|ACL93521.1| tRNA 2-methylthioadenosine synthase [Caulobacter crescentus NA1000]
Length = 448
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 238/443 (53%), Gaps = 44/443 (9%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q R++ +TYGCQMNV D E + +++ GY V++ PE A+++ +NTC IR+ A KV+
Sbjct: 6 QKRLFIKTYGCQMNVYDSERMADVLRPLGYG-VVDEPEGADLVVLNTCHIREKATEKVYS 64
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L Y +K +K A GR I V GC+A+ +I++ K VD+V GP AY
Sbjct: 65 ELGYIKQMKD--RKAEAGGRM------TIAVAGCVAQAEGKEIMNRQKAVDLVVGPQAYH 116
Query: 196 DLPRLLEEVD--YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP L+ G++ + + +E + D P VTAF++V GC+ C+FC+V
Sbjct: 117 QLPELIARAHRATGER-LAADFAADEKF-DALPAERHVTGVTAFLTVQEGCDKFCTFCVV 174
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRPV IV+E L +GV+EVTLLGQNVN+Y+ G L++
Sbjct: 175 PYTRGGEWSRPVNDIVEEAKRLADQGVREVTLLGQNVNAYD-----------GDGSTLAK 223
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
+ K+ D LDR+ RYT+ HP+D D+L+ + P + Y+H
Sbjct: 224 LVRQLAKI--------DGLDRI---------RYTTSHPRDMGDDLIEAHGELPELMPYLH 266
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q G+ +L+ M R +T E+Y+ L++KIR PD+ +S DFI GF GE + + TL
Sbjct: 267 LPVQAGSDKILKAMNRDHTAESYVKLIEKIRAARPDIAMSGDFIVGFPGERDGDFEKTLE 326
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L++ VG+ A+ F YS R T A V E VK RL L + E SQVG
Sbjct: 327 LVREVGFASAFSFKYSRRPGTPAS-AMPGQVDEAVKAERLERLNQLLDEQQRAFNASQVG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKS 516
V VL E + ++VG+S
Sbjct: 386 KVLPVLFEKAGRHP--GQIVGRS 406
>gi|32034173|ref|ZP_00134395.1| COG0621: 2-methylthioadenine synthetase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208789|ref|YP_001054014.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|190150645|ref|YP_001969170.1| hypothetical protein APP7_1376 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307263992|ref|ZP_07545593.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|229890417|sp|A3N1X3.1|MIAB_ACTP2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890418|sp|B3GYA4.1|MIAB_ACTP7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|126097581|gb|ABN74409.1| hypothetical protein APL_1325 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189915776|gb|ACE62028.1| hypothetical protein APP7_1376 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306870681|gb|EFN02424.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 475
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 249/450 (55%), Gaps = 42/450 (9%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + ++ + E+ + PE A+V+ +NTC+IR+ A+ KV+ +
Sbjct: 2 AKLHITTWGCQMNEYDSSKMADLLNSTHGLELTDKPEEADVLLLNTCSIREKAQEKVFSQ 61
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L W + WKK+ P I+ V GC+A + + I D VD+V GP
Sbjct: 62 LGR-W---KNWKKD---------KPDLIIGVGGCVASQEGEHIRDRAPFVDIVFGPQTLH 108
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ ++ G + I + E D P ++ TAFVS+M GCN CSFC+VP+
Sbjct: 109 RLPEMINKIRGGDRAIVDISFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCSFCVVPY 167
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y E F
Sbjct: 168 TRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYR-----------------GETF 210
Query: 316 NS-MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ +C ++ LR +D + R RYT+ HP +F D+++ + RD P + ++HL
Sbjct: 211 DGGICTFAEL-LRLVAAIDGID------RVRYTTSHPIEFTDDIIEVYRDTPELVSFLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G VL M+R +T Y +++K+R++ P++ +SSDFI GF GET E+ T+ +
Sbjct: 264 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V +DM++ F YS R T A + DD+ EE K+ RL L + Q + +GT
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAA-DLPDDISEEEKKERLARLQQRINHQAMQFSRAMLGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEGP+KK EL G+++ V F
Sbjct: 383 EQRVLVEGPSKKDI-MELTGRTENNRIVNF 411
>gi|134296886|ref|YP_001120621.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
vietnamiensis G4]
gi|387903198|ref|YP_006333537.1| trNA-i(6)A37 methylthiotransferase [Burkholderia sp. KJ006]
gi|229890494|sp|A4JHN3.1|MIAB_BURVG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|134140043|gb|ABO55786.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
vietnamiensis G4]
gi|387578090|gb|AFJ86806.1| tRNA-i(6)A37 methylthiotransferase [Burkholderia sp. KJ006]
Length = 457
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 246/449 (54%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRASGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA LS G
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LSAGSA 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 DIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVSHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETE++ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK +RL L E+ + S VG V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELSGRTENNRVVNF 414
>gi|218515353|ref|ZP_03512193.1| putative 2-methylthioadenine synthetase (miaB-like) protein
[Rhizobium etli 8C-3]
Length = 452
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 240/444 (54%), Gaps = 42/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + GY ++ E A+++ +NTC IR+ A KV+ L
Sbjct: 6 KVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDM-EEADLVLLNTCHIREKAAEKVYSAL 64
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K KK A GR I V GC+A+ ++IL VDVV GP Y L
Sbjct: 65 GRLREMK---KKKAADGREM-----MIGVTGCVAQAEGEEILRRAPAVDVVIGPQTYHRL 116
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSVTAFVSVMRGCNNMCSFCIV 253
P L GQ+ ++T ++E+ + + P+ +I VTAF++V GC+ C+FC+V
Sbjct: 117 PEALRRAQQGQRVVDTEYAIEDKFEHL-PIAESRKIRARGVTAFLTVQEGCDKFCTFCVV 175
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRPV IV+E ++L + GV+E+TLLGQNVN+++ G W L
Sbjct: 176 PYTRGSEVSRPVSQIVEEAEKLVEAGVREITLLGQNVNAWHGAGPR------GEAWSL-- 227
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
DLL RL+ E P + R RYT+ HP+D D L+ RD + Y+
Sbjct: 228 ---------------GDLLYRLA-EIPGLARLRYTTSHPRDMDDRLIEAHRDLRALMPYL 271
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+ +L+ M R +T YL L+++IR + PD+ LS DFI GF GET+ + DTL
Sbjct: 272 HLPVQSGSDRILKAMNRRHTAAEYLSLIERIRTVRPDIALSGDFITGFPGETDADFEDTL 331
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V Y A+ F YS R T D VPEE+K RL L + + +S +
Sbjct: 332 RLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLERLQALLLKQQQEFAESCI 390
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G +L+E P + +L+G+S
Sbjct: 391 GKEIDLLLEKPGRMP--GQLIGRS 412
>gi|52080307|ref|YP_079098.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319645912|ref|ZP_08000142.1| hypothetical protein HMPREF1012_01176 [Bacillus sp. BT1B_CT2]
gi|404489194|ref|YP_006713300.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423682247|ref|ZP_17657086.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
licheniformis WX-02]
gi|81385531|sp|Q65JE5.1|MIAB_BACLD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|52003518|gb|AAU23460.1| conserved hypothetical protein [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52348185|gb|AAU40819.1| tRNA methylthiotransferase YmcB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317391662|gb|EFV72459.1| hypothetical protein HMPREF1012_01176 [Bacillus sp. BT1B_CT2]
gi|383439021|gb|EID46796.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
licheniformis WX-02]
Length = 509
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 250/452 (55%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + E+A VI +NTCAIR+ AE+KV+ +
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDSTEDANVILLNTCAIRENAENKVFGEI 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LK++ +P I+ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALKKD-------------NPDLILGVCGCMSQEESVVNRILKKHPFVDLIFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLE-ETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP LL E ++ + + S E + ++ VR K + +V++M GC+ C++CIV
Sbjct: 173 HRLPELLSEAYLSKEMVIEVWSKEGDVIENLPKVRTGK--IKGWVNIMYGCDKFCTYCIV 230
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y +
Sbjct: 231 PYTRGKERSRRPEDIIQEVRRLAAEGYKEITLLGQNVNAY------------------GK 272
Query: 314 GFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
F M + GL L+D L ++ P R R+T+ HP+DF D L+ ++ N+ +I
Sbjct: 273 DFEDM----EYGL--GHLMDELRKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHI 324
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S VL+ M R Y RE YL+LV KI++ +P+ L++D I GF ET+E+ +TL
Sbjct: 325 HLPVQSGSSDVLKLMARKYDRERYLELVAKIKKAMPNASLTTDIIVGFPNETDEQFEETL 384
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+L + V +D AY F YS RE T A + D+VP VK+ RL L E E + +
Sbjct: 385 SLYREVEFDSAYTFIYSPREGTPAAK-MKDNVPMRVKKERLQRLNEVVNEISAKKMKEYE 443
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K PD L G + + V F
Sbjct: 444 GQVVEVLVEGESKNNPDI-LAGYTRKNKLVNF 474
>gi|150017413|ref|YP_001309667.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Clostridium
beijerinckii NCIMB 8052]
gi|229890483|sp|A6LWI1.1|MIAB_CLOB8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|149903878|gb|ABR34711.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium beijerinckii
NCIMB 8052]
Length = 455
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 235/448 (52%), Gaps = 45/448 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ +TYGCQMN D E + ++K GY N E A +I NTC +R+ AE+KV+ L
Sbjct: 21 FIQTYGCQMNEEDSEKLSGMLKRMGYENTENRDE-ASIIIFNTCCVRENAENKVFGNLG- 78
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRD 196
A + + K+P ++ + GCM ++ + D IL V+++ G
Sbjct: 79 ------------ALKKQKEKNPDLVIGICGCMMQQKGMADDILKRFPYVNIIFGTHNSYK 126
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L V I ++ E + P+ K+ + FV++M GCNN C++CIVP+
Sbjct: 127 FPEYLNRVKTEGVQIKEIIDKETEIVEGIPID-RKSDIKGFVTIMYGCNNFCTYCIVPYV 185
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR E IV E+ ++ G KEVTLLGQNVNSY G+E+ +
Sbjct: 186 RGRERSRKPEDIVNEIKDMVTRGYKEVTLLGQNVNSYG--KGLEENI------------- 230
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FADLL +++ R R+ + HPKD +++Y +RD VC+ IHLP
Sbjct: 231 ----------TFADLLRKVNEIEGLERIRFMTSHPKDLTLDVVYAIRDCDKVCEQIHLPV 280
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R YT+E Y+ L +KIR IPDV S+D I GF GETEE+ ++TL L K
Sbjct: 281 QSGSDRILKEMNRHYTKEQYITLAKKIRAEIPDVTFSTDIIVGFPGETEEDFSETLELAK 340
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD A+ F YS R T A + + +P+E+K R L+E + G +
Sbjct: 341 EVRYDAAFTFIYSRRNHTPADK-MENQIPDEIKHERFNRLVEIVNTGIAKGNKDAEGKIY 399
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K + +L G++ G V F
Sbjct: 400 EVLVEGYSKN-DEAKLTGRTRNGRLVNF 426
>gi|254470768|ref|ZP_05084171.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudovibrio sp. JE062]
gi|211959910|gb|EEA95107.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudovibrio sp. JE062]
Length = 470
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 237/442 (53%), Gaps = 38/442 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + N GY + N P++A+++ +NTC IR+ A KV+ L
Sbjct: 28 KVFIKTYGCQMNVYDSDRMNDALSNDGYEKTEN-PDDADLVILNTCHIREKAAEKVYSEL 86
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K+ G+ + V GC+A+ +I +VD+V GP +Y L
Sbjct: 87 GRIRKLKEEKAKD---GKQM-----MVSVAGCVAQAEGAEISRRAPVVDLVVGPQSYHRL 138
Query: 198 PRLLEEVDYGQKGINTLLSLEETY---ADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL G K + T +++ + A S + K VTAFV+V GC+ C+FC+VP
Sbjct: 139 PELLTRASNGSKVVETEFDIQDKFKHLATPSKEAVRKRGVTAFVTVQEGCDKFCTFCVVP 198
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE IV E + L GV+EVTLLGQNVN+++ E G W L E
Sbjct: 199 YTRGAEVSRKVEQIVMETERLAAAGVREVTLLGQNVNAWH------GEGPDGREWGLGEL 252
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ D ++RL RYT+ HP+D D L+ RD + Y+HL
Sbjct: 253 LFRLAKI--------DGIERL---------RYTTSHPRDMEDSLIAAHRDLDILMPYLHL 295
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ A+L+ M R +TR+ Y L+ +IR+ D+ LS DFI GF GET+++H DTL L
Sbjct: 296 PVQSGSDAILKAMNRKHTRDDYFRLIDRIREARDDIALSGDFIVGFPGETDQDHKDTLDL 355
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V Y A+ F YS R T + + E+VK RL EL E S +G
Sbjct: 356 IRRVTYGSAFSFKYSPRPGTPGA-TLEEQIDEQVKSERLAELQELLSTQQKDFNASLIGK 414
Query: 495 VQLVLVEGPNKKAPDTELVGKS 516
VL E ++ + +L G+S
Sbjct: 415 TIDVLFEKEGRR--EGQLAGRS 434
>gi|319898348|ref|YP_004158441.1| hypothetical protein BARCL_0170 [Bartonella clarridgeiae 73]
gi|319402312|emb|CBI75851.1| bifunctional enzyme [Bartonella clarridgeiae 73]
Length = 460
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 237/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + GY P +A++I INTC IR+ A K++ L
Sbjct: 17 KVFIKTYGCQMNVYDSQRMNDSLSAQGYITT-QTPNDADLILINTCHIREKAAEKLYSDL 75
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E R+ K P I V GC+A+ ++IL VD + GP Y L
Sbjct: 76 GRLQIIRQE--------RTNDK-PLMIGVTGCVAQAEGNEILRRAPTVDFIIGPQMYHRL 126
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL++V G+K + T ++E+ + + P + + ++AF++V GC+ C+FC+VP
Sbjct: 127 PELLKQVTQGKKVVETNYAVEDKFTHLPPHNKRAVQQRGISAFLTVQEGCDKFCTFCVVP 186
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I E +L + GVKE+TLLGQNVN+++ S G WRL +
Sbjct: 187 YTRGAEISRSVEQITNEAHQLIEAGVKEITLLGQNVNAWHGQS------IDGKTWRLGDL 240
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + K+ GL+ R RYT+ HP D D L+ RD + Y+HL
Sbjct: 241 LHHLAKID--GLK---------------RLRYTTSHPCDMDDSLIAAHRDLDILMPYLHL 283
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L+ KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 284 PVQSGSDRILKAMNRQHKSIHYLHLIDKIRAARPDIAFSGDFIVGFPGETDEDFEETIKL 343
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K VGY AY F YS R T +N+VD E VK RL L + S++
Sbjct: 344 IKQVGYSSAYSFKYSSRPGTVGATMKNHVD---ETVKNARLQHLQTVLLDQQHIFLHSKI 400
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + ++VG+S
Sbjct: 401 GQTTDVLIEKIGRHS--GQMVGRS 422
>gi|307248353|ref|ZP_07530376.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|307250579|ref|ZP_07532521.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|307252960|ref|ZP_07534848.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307261809|ref|ZP_07543475.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|229890699|sp|B0BQR0.2|MIAB_ACTPJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|306855091|gb|EFM87271.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|306857395|gb|EFM89509.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306859598|gb|EFM91623.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306868627|gb|EFN00438.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
Length = 475
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 249/450 (55%), Gaps = 42/450 (9%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + ++ + E+ + PE A+V+ +NTC+IR+ A+ KV+ +
Sbjct: 2 AKLHITTWGCQMNEYDSSKMADLLNSTHGLELTDKPEEADVLLLNTCSIREKAQEKVFSQ 61
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L W + WKK+ P I+ V GC+A + + I D VD+V GP
Sbjct: 62 LGR-W---KNWKKD---------KPDLIIGVGGCVASQEGEHIRDRAPFVDIVFGPQTLH 108
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ ++ G + I + E D P ++ TAFVS+M GCN CSFC+VP+
Sbjct: 109 RLPEMINKIRGGDRAIVDISFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCSFCVVPY 167
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y E F
Sbjct: 168 TRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYR-----------------GETF 210
Query: 316 NS-MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ +C ++ LR +D + R RYT+ HP +F D+++ + RD P + ++HL
Sbjct: 211 DGGICTFAEL-LRLVAAIDGID------RVRYTTSHPIEFTDDIIEVYRDTPELVSFLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G VL M+R +T Y +++K+R++ P++ +SSDFI GF GET E+ T+ +
Sbjct: 264 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V +DM++ F YS R T A + DD+ EE K+ RL L + Q + +GT
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAA-DLPDDISEEEKKARLARLQQRINHQAMQFSRAMLGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEGP+KK EL G+++ V F
Sbjct: 383 EQRVLVEGPSKKDI-MELTGRTENNRIVNF 411
>gi|240139952|ref|YP_002964429.1| tRNA modification enzyme MiaB, isopentenyl-adenosine A37 tRNA
methylthiolase [Methylobacterium extorquens AM1]
gi|418061495|ref|ZP_12699351.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Methylobacterium extorquens DSM 13060]
gi|240009926|gb|ACS41152.1| tRNA modification enzyme MiaB, putative isopentenyl-adenosine A37
tRNA methylthiolase [Methylobacterium extorquens AM1]
gi|373564962|gb|EHP91035.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Methylobacterium extorquens DSM 13060]
Length = 446
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 227/424 (53%), Gaps = 36/424 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y ++YGCQMN D + ++ GYS V E A+V+ +NTC IR+ A KV+ L
Sbjct: 3 KAYVKSYGCQMNAYDAGRMADVLAAEGYSATDTV-EEADVVVLNTCHIREKAAEKVYSEL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E R++S H +IVV GC+A+ +IL VDVV GP +Y L
Sbjct: 62 GRLRVLKGE--------RAESGHDTRIVVAGCVAQAEGREILSRAPAVDVVVGPQSYHRL 113
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL + + ++T E+ + D P R ++ VT F++V GC+ C+FC+VP+TR
Sbjct: 114 PDLLRQ-SRETRVVDTEFPAEDKF-DHLPARRNRG-VTGFLTVQEGCDKFCAFCVVPYTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SR V ++V E L + GV+E+TL+GQNVN+Y+ + GA L
Sbjct: 171 GAEVSRSVAAVVDEARRLVEGGVREITLIGQNVNAYH------GDGPDGAPATLGH---- 220
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
L+D LS +R RYT+ HP DF D+L+ P V Y+HLP Q
Sbjct: 221 -------------LMDALSAVPGLLRLRYTTSHPNDFADDLIAAHATNPLVMPYLHLPVQ 267
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L M R +T +AY L+++IR PD+ LSSDFI GF GET+ + A+T+ L+
Sbjct: 268 SGSDGILHAMNRRHTGDAYRRLIERIRNARPDIALSSDFIVGFPGETDADFAETMRLVSD 327
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+G+ A+ F YS R T A D VPE VK RL L + + VGT+
Sbjct: 328 IGFSAAFSFKYSPRAGTPAAERE-DAVPEAVKTERLAALQDLLDRQRHAYNAASVGTLTE 386
Query: 498 VLVE 501
+LVE
Sbjct: 387 ILVE 390
>gi|47568277|ref|ZP_00238980.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus G9241]
gi|47555105|gb|EAL13453.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus G9241]
Length = 509
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 255/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK++RL L + + D G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKKRLQRLNALVNKLAIEKNDRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|34763969|ref|ZP_00144862.1| tRNA 2-methylthioadenosine synthase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27886260|gb|EAA23543.1| tRNA 2-methylthioadenosine synthase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 435
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 245/449 (54%), Gaps = 56/449 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY +V +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DVTEEIDNADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVEGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L +M RGYT+E YL LV KI+ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDD-VPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
V +D +YMF YS+R+ T A +D+ + E VK+ RL L+E + + + +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA--IMDNQIEEAVKKERLQRLMEVQNKCSFEESSKYKDRI 379
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 380 VKVLVEGPSKKNKEV-LSGRTSTNKVVLF 407
>gi|319943047|ref|ZP_08017330.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lautropia mirabilis ATCC
51599]
gi|319743589|gb|EFV95993.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lautropia mirabilis ATCC
51599]
Length = 473
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 237/449 (52%), Gaps = 41/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y T+GCQMN D E + ++ +E+ + P A+++ NTC+IR+ A+ KV+ L
Sbjct: 4 KLYLRTFGCQMNSYDSERMADLLAETEGAELTDDPNEADIVLFNTCSIREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
YF +K + + I V GC+A + + I+ VDVV GP L
Sbjct: 64 GYFRAMKAARPELI------------IGVGGCVASQEGEAIVSRAPFVDVVFGPQTLHRL 111
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L++ G ++ E + + P R K +AFVS+M GC+ CSFC+VP+T
Sbjct: 112 PELIDRRRQTGHSQVDIRFPEIEKFDALPPPR--KVGASAFVSIMEGCSKYCSFCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP E ++ +V L ++GVKEVTLLGQNVN+Y EGF+
Sbjct: 170 RGEEISRPFEDVLSDVITLAEQGVKEVTLLGQNVNAY---------------LGQVEGFD 214
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA LLD + + P + R RYT+ HP++F + L+ P + +HLP
Sbjct: 215 APAD-------FATLLDYIH-DIPGIERIRYTTSHPREFTERLIDAHAQLPKLAPLVHLP 266
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+ +L M+RGYT Y +V+++R P +GL++DFI GF GETE + TL L
Sbjct: 267 VQSGSDRILAAMKRGYTALEYRSIVRRLRAASPGIGLTTDFIVGFPGETEADFLKTLKLA 326
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ + YD AY F YS R T A N D+ P E K RL L ++S+ VG+
Sbjct: 327 EDLAYDDAYSFIYSPRPGTPAA-NLQDETPHEEKVERLQRLQAVVQQSSLAIARGMVGSR 385
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEGP++K +EL G+ V F
Sbjct: 386 QRVLVEGPSRKDA-SELSGRCPNNRMVNF 413
>gi|402565551|ref|YP_006614896.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
cepacia GG4]
gi|402246748|gb|AFQ47202.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
cepacia GG4]
Length = 457
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 246/449 (54%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRTSGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGST 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVSHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETE++ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK +RL L E+ + S VG V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELSGRTENNRVVNF 414
>gi|374328848|ref|YP_005079032.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudovibrio sp. FO-BEG1]
gi|359341636|gb|AEV35010.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pseudovibrio sp. FO-BEG1]
Length = 470
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 235/442 (53%), Gaps = 38/442 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + N GY + N P++A+++ +NTC IR+ A KV+ L
Sbjct: 28 KVFIKTYGCQMNVYDSDRMNDALSNDGYEKTEN-PDDADLVILNTCHIREKAAEKVYSEL 86
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K+ G+ + V GC+A+ +I +VD+V GP +Y L
Sbjct: 87 GRIRKLKEEKAKD---GKQMM-----VSVAGCVAQAEGAEISRRAPVVDLVVGPQSYHRL 138
Query: 198 PRLLEEVDYGQKGINTLLSLEETY---ADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL G K + T +++ + A S + K VTAFV+V GC+ C+FC+VP
Sbjct: 139 PELLTRASNGSKVVETEFDIQDKFKHLATPSKEAVRKRGVTAFVTVQEGCDKFCTFCVVP 198
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE IV E + L GV+EVTLLGQNVN+++ E G W L E
Sbjct: 199 YTRGAEVSRKVEQIVMETERLAAAGVREVTLLGQNVNAWH------GEGPDGREWGLGEL 252
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ G++ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 253 LFRLAKID--GIK---------------RLRYTTSHPRDMEDSLIAAHRDLDILMPYLHL 295
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ A+L+ M R +TR+ Y L+ +IR+ D+ LS DFI GF GET+++H DTL L
Sbjct: 296 PVQSGSDAILKAMNRKHTRDDYFRLIDRIREARDDIALSGDFIVGFPGETDQDHKDTLDL 355
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V Y A+ F YS R T + V E VK RL EL E S +G
Sbjct: 356 IRRVTYGSAFSFKYSPRPGTPGA-TLEEQVEERVKSERLAELQELLSTQQKDFNASLIGK 414
Query: 495 VQLVLVEGPNKKAPDTELVGKS 516
VL E ++ + +L G+S
Sbjct: 415 TIDVLFEKEGRR--EGQLAGRS 434
>gi|15602866|ref|NP_245938.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pasteurella
multocida subsp. multocida str. Pm70]
gi|378773845|ref|YP_005176088.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Pasteurella multocida 36950]
gi|386833830|ref|YP_006239144.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pasteurella multocida
subsp. multocida str. 3480]
gi|417850968|ref|ZP_12496779.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
gi|417853675|ref|ZP_12499030.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|421263745|ref|ZP_15714771.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pasteurella
multocida subsp. multocida str. P52VAC]
gi|18203221|sp|Q9L699.1|MIAB_PASMU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|7716541|gb|AAF68426.1|AF237940_1 conserved hypothetical protein [Pasteurella multocida]
gi|12721330|gb|AAK03085.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|338219138|gb|EGP04837.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pasteurella
multocida subsp. multocida str. Anand1_goat]
gi|338220176|gb|EGP05726.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pasteurella
multocida subsp. gallicida str. Anand1_poultry]
gi|356596393|gb|AET15119.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Pasteurella multocida 36950]
gi|385200530|gb|AFI45385.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pasteurella multocida
subsp. multocida str. 3480]
gi|401689155|gb|EJS84640.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Pasteurella
multocida subsp. multocida str. P52VAC]
Length = 474
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 248/449 (55%), Gaps = 42/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + ++ + E+ +PE A+V+ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLNSTHGLELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
WK+ KH P +V V GC+A + + I VD++ GP
Sbjct: 64 G-------RWKE-------LKKHKPGLVIGVGGCVASQEGEHIRTRAPYVDIIFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ ++ G+ + + E D P ++ TAFVS+M GCN CSFC+VP+
Sbjct: 110 RLPEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCSFCVVPY 168
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y GA
Sbjct: 169 TRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYR-----------GATHD----- 212
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ +C ++ LR +D + R R+T+ HP +F D+++ + RD P + ++HLP
Sbjct: 213 DGICTFAEL-LRLVAAIDGID------RLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLP 265
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+ VL M+R +T Y +++K+R + P++ +SSDFI GF GET E+ T+ L+
Sbjct: 266 VQSGSDRVLSMMKRNHTALEYKSIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMNLI 325
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
V +DM++ F YS R T A + DDV EE K++RL L + Q + +GT
Sbjct: 326 AQVNFDMSFSFIYSARPGTPAA-DMPDDVTEEEKKQRLYVLQQRINNQAAQFSRAMLGTE 384
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEGP+KK EL G+++ V F
Sbjct: 385 QRVLVEGPSKKDL-MELTGRTETNRIVNF 412
>gi|238028582|ref|YP_002912813.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
glumae BGR1]
gi|237877776|gb|ACR30109.1| 2-methylthioadenine synthetase [Burkholderia glumae BGR1]
Length = 457
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 245/449 (54%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A+VI NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDRPEDADVILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLIIG-----------VGGCVASQEGAAIVARAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PKMIDARRASGRSQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ E+ L +GV+EVTLLGQNVN+Y GA L+ G
Sbjct: 170 RGDEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGST 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F LL + P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DLPGIERIRYTTSHPKEFTQRLLEVYARVPKLVNHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ VL M+RGYT Y L++K+R I P + LS+D I GF GETE + T+ L+
Sbjct: 268 VQHGSDRVLMAMKRGYTVLEYKSLIRKLRAIRPGLSLSTDIIVGFPGETEADFDKTMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK +RL L E+ S VG V
Sbjct: 328 HEMRYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVAHISASMVGGV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|167040247|ref|YP_001663232.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Thermoanaerobacter sp. X514]
gi|256750831|ref|ZP_05491716.1| RNA modification enzyme, MiaB family [Thermoanaerobacter
ethanolicus CCSD1]
gi|300914331|ref|ZP_07131647.1| RNA modification enzyme, MiaB family [Thermoanaerobacter sp. X561]
gi|307724433|ref|YP_003904184.1| RNA modification enzyme, MiaB family [Thermoanaerobacter sp. X513]
gi|229891016|sp|B0K1A1.1|MIAB_THEPX RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|166854487|gb|ABY92896.1| RNA modification enzyme, MiaB family [Thermoanaerobacter sp. X514]
gi|256750414|gb|EEU63433.1| RNA modification enzyme, MiaB family [Thermoanaerobacter
ethanolicus CCSD1]
gi|300889266|gb|EFK84412.1| RNA modification enzyme, MiaB family [Thermoanaerobacter sp. X561]
gi|307581494|gb|ADN54893.1| RNA modification enzyme, MiaB family [Thermoanaerobacter sp. X513]
Length = 471
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 246/429 (57%), Gaps = 46/429 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMNV+D E + +++ GY N+ E A+V+ NTCA+R++AE +V R++
Sbjct: 36 ETYGCQMNVHDSEKLAGMLEKMGYKYTENL-EQADVLLFNTCAVREHAEIRVLGRVSQMK 94
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRDLP 198
LK +++P I+ V GCM + + + I + +D+V G P
Sbjct: 95 ELK-------------ARNPNLIIGVSGCMMQEKNVVEAIKEKYSYIDIVFGTHNIYKFP 141
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LL E Q + ++ + + PV+ N + A+V+++ GCNN C++CIVP+TRG
Sbjct: 142 QLLWEALNSQDIVIDIIEDTKNVIEELPVKRDSN-LKAWVNIIYGCNNFCTYCIVPYTRG 200
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE+SR E I+ EV EL ++G KE+TLLGQNVNSY K+++
Sbjct: 201 REKSRKPEDIIAEVKELAQKGYKEITLLGQNVNSYG------KDLDED------------ 242
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ FA LL +L+ +E E R R+ + HPKD DEL+Y MRD VC+++HLP Q
Sbjct: 243 -------ITFAKLLYKLNDIEGIE-RIRFMTSHPKDISDELIYAMRDLDKVCEHLHLPVQ 294
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
G++ +L++M R YT+E YL+++ K+R IPD+ +++D I GF GETEE+ +TL L++
Sbjct: 295 AGSNKILKKMNRKYTKEHYLEIIDKVRSNIPDIAITTDIIVGFPGETEEDFLETLDLVER 354
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D AY F YS R T A N D V + VK RL LIE + + + G +
Sbjct: 355 VRFDAAYTFIYSKRAGTVA-ANMPDQVDDAVKHERLERLIELQNKISLEKSAELRGKIVE 413
Query: 498 VLVEGPNKK 506
VL+EG +K+
Sbjct: 414 VLIEGISKR 422
>gi|307246244|ref|ZP_07528325.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307255228|ref|ZP_07537043.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307257391|ref|ZP_07539161.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|307259662|ref|ZP_07541386.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306852853|gb|EFM85077.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306861777|gb|EFM93756.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306864241|gb|EFM96154.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|306866307|gb|EFM98171.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
Length = 475
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 249/450 (55%), Gaps = 42/450 (9%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + ++ + E+ + PE A+V+ +NTC+IR+ A+ KV+ +
Sbjct: 2 AKLHITTWGCQMNEYDSSKMADLLNSTHGLELTDKPEEADVLLLNTCSIREKAQEKVFSQ 61
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L W + WKK+ P I+ V GC+A + + I D VD+V GP
Sbjct: 62 LGR-W---KNWKKD---------KPDLIIGVGGCVASQEGEHIRDRAPFVDIVFGPQTLH 108
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ ++ G + I + E D P ++ TAFVS+M GCN CSFC+VP+
Sbjct: 109 RLPEMINKIRGGDRAIVDISFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCSFCVVPY 167
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y E F
Sbjct: 168 TRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYR-----------------GETF 210
Query: 316 NS-MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ +C ++ LR +D + R RYT+ HP +F D+++ + RD P + ++HL
Sbjct: 211 DGGICTFAEL-LRLVAAIDGID------RVRYTTSHPIEFTDDIIEVYRDTPELVSFLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G VL M+R +T Y +++K+R++ P++ +SSDFI GF GET E+ T+ +
Sbjct: 264 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V +DM++ F YS R T A + DD+ EE K+ RL L + Q + +GT
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAA-DLPDDISEEEKKARLARLQQRINHQAMQFSRAMLGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEGP+KK EL G+++ V F
Sbjct: 383 EQRVLVEGPSKKDI-MELTGRTENNRIVNF 411
>gi|116625754|ref|YP_827910.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Solibacter
usitatus Ellin6076]
gi|122252074|sp|Q01RU5.1|MIAB_SOLUE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|116228916|gb|ABJ87625.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Solibacter
usitatus Ellin6076]
Length = 445
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 230/429 (53%), Gaps = 46/429 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
Y ET+GCQMN +D E V+ + GY +V PE AE++F NTC+IRD AE KV+ RL
Sbjct: 9 FYIETFGCQMNAHDSEKVVGTLLAEGYEQVA-TPEAAELVFYNTCSIRDKAEQKVFNRLQ 67
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
F KRE K G VLGC+A++ +KI D V +V G +Y LP
Sbjct: 68 NF---KREGMKGKIFG-----------VLGCVAQQEGEKIFDRAPHVSLVAGSASYTRLP 113
Query: 199 RLLEEVDYGQKGINTL-LSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
+L +++ G + + L L EET+ +P N A+++++ GC+ C++C+VPFTR
Sbjct: 114 EMLVQLEAGNRRVTGLSLDTEETFD--TPFTRRDNPHRAYLTIIEGCDKACAYCVVPFTR 171
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G ERSR ES++ E L ++G EV LLGQNVNSY D S
Sbjct: 172 GPERSRTSESVMAEARGLTEKGYTEVQLLGQNVNSYRDPS-------------------- 211
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMR-FRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
G FA LL +++ E P MR RYT+ HP+DF ++ M +C +IHLP
Sbjct: 212 -----PAGWDFATLLAKVA-EIPGMRRVRYTTSHPRDFVRPIVDAMDANEAICDHIHLPV 265
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S VL M R YTR+ YL + I+ L++D I GF GET+ + TL L+
Sbjct: 266 QSGSSKVLAAMDRLYTRDEYLRRIDWIKSAKRRYSLTTDIIIGFPGETDADFEQTLDLLD 325
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD + F YS R T A D +PEE KQRRL L E R + +G++Q
Sbjct: 326 EVQYDSLFSFKYSPRPNTSAL-AMEDRIPEEEKQRRLLTLQEKQRAIQIRRNAEMIGSIQ 384
Query: 497 LVLVEGPNK 505
VLVEG N+
Sbjct: 385 EVLVEGRNQ 393
>gi|295677633|ref|YP_003606157.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
CCGE1002]
gi|295437476|gb|ADG16646.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
CCGE1002]
Length = 461
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 248/449 (55%), Gaps = 36/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A + PE+A+VI NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLGAAEGLVKTDTPEDADVILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK + N+ G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-DANPNLIIG-----------VGGCVASQEGASIVARAPYVDIVFGPQTLHRL 111
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++E G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDERRASGRAQVDISFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ E+ L +GV+EVTLLGQNVN+Y G GA L+ G
Sbjct: 170 RGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYRGKFG-------GA---LTLGST 219
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 220 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVSHLHLP 271
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETEE+ A + L+
Sbjct: 272 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEEDFAKMMALV 331
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ + YD ++ F YS R T A N DD P EVK +RL L E+ + D+ VG V
Sbjct: 332 EEMKYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVQRISDAMVGNV 390
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVE P +K P+ EL G+++ V F
Sbjct: 391 ERILVERPARKDPN-ELAGRTENNRVVNF 418
>gi|262374162|ref|ZP_06067439.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter junii
SH205]
gi|262311173|gb|EEY92260.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter junii
SH205]
Length = 483
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 257/476 (53%), Gaps = 53/476 (11%)
Query: 60 APASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNA-GYSEVINVPENAEVI 118
A + V+ T + S ++Y ET GCQMN D + ++ ++ GY N P A+++
Sbjct: 14 ASENTVTQPTHTTDVSMKKLYIETQGCQMNEYDSHRMADLLGDSHGYVLTTN-PNEADIL 72
Query: 119 FINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKI 178
+NTC+IR+ A+ KV+ L W +E ++ G V GC+A + D I
Sbjct: 73 LMNTCSIREKAQEKVFSELGR-WRKLKEQNPDLVIG-----------VGGCVASQEGDNI 120
Query: 179 LDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISK------- 231
VD+V GP LP++L D Q + + DIS I K
Sbjct: 121 QKRAPYVDMVFGPQTLHRLPQML---DQHQAQVEKPKKEKIKLVDISFPDIEKFDFLPEP 177
Query: 232 --NSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQN 289
AFVS+M GC+ CSFC+VP+TRG E SRP++ ++ E+ L ++GV+E++LLGQN
Sbjct: 178 RVEGFKAFVSIMEGCSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAEKGVREISLLGQN 237
Query: 290 VNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTS 348
VN Y G + EG +C F +LL RL E P + R RYT+
Sbjct: 238 VNGYR-----------GETF---EG--GICT-------FPELL-RLVAEIPGIGRLRYTT 273
Query: 349 PHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIP 408
HP +F DEL+ RD P + ++HLP Q+G++ VL+ M+R +T + Y+D + K+R++ P
Sbjct: 274 SHPLEFSDELIQCYRDLPQMVSHLHLPVQSGSNDVLQAMKRNHTIDVYIDKIAKLRKVRP 333
Query: 409 DVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEV 468
D+ LSSDFI GF GET+E A+TL +K + +D +Y F YS R T A DD PE+V
Sbjct: 334 DMHLSSDFIIGFPGETDEHFAETLQFIKDLDFDHSYSFVYSKRPGTPA-SELPDDTPEQV 392
Query: 469 KQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
K+ RL ++ + ++S+ D+ +G ++ VL+E + K P+ L+G +D V F
Sbjct: 393 KKDRLAQVQQVIKQSSIDKTDAMLGKIERVLIEKVSDKDPNL-LIGTADNTRLVTF 447
>gi|32475869|ref|NP_868863.1| MiaB protein- tRNA-thiotransferase [Rhodopirellula baltica SH 1]
gi|81659862|sp|Q7ULM9.1|MIAB_RHOBA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|32446412|emb|CAD76240.1| probable MiaB protein-putative tRNA-thiotransferase [Rhodopirellula
baltica SH 1]
Length = 479
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 242/447 (54%), Gaps = 51/447 (11%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y +T GCQMNV D E+V++ +K GY+ V++ P A+++ NTC+IR+ AE K + L
Sbjct: 8 VYIKTVGCQMNVLDSEMVIADLKRHGYT-VVDTPGEADLLLYNTCSIREQAEEKTYSALG 66
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
++++HP K + V+GCMA++ ++ I VD+V GP +
Sbjct: 67 KLK-------------ETKARHPEKTIGVMGCMAQKDQETIFRRAPFVDMVVGPGQLHAI 113
Query: 198 PRLLEEVDYGQ-----------KGINTLLSL-EETYADISPVRISKNSVTAFVSVMRGCN 245
P +L +V G+ G T+++ ET+ + + A++ + GC+
Sbjct: 114 PDMLTKVTSGEGRQMAVSLGRKDGKQTVVARSHETFDPLRDPTMRPTPFQAYLRIQIGCD 173
Query: 246 NMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEP 305
C++C+VP TRG E+ R E IV E L ++G E+TLLGQ VNSY
Sbjct: 174 KFCTYCVVPNTRGPEQGRSPEEIVSEARVLAEQGALEITLLGQTVNSYR----------- 222
Query: 306 GANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDR 365
R +G M A LL+RL R ++ + +PKD LL +RD
Sbjct: 223 ---HRGPDGETDM----------AGLLERLHDIDGLKRIKFVTNYPKDMTARLLETIRDL 269
Query: 366 PNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETE 425
P V Y+H+PAQ+G+ AVL+RM+RGYT Y+++ ++I ++P+ +SSDFI GFCGET+
Sbjct: 270 PKVSPYLHVPAQSGSDAVLKRMKRGYTIADYMEMFERIETVLPEASVSSDFIVGFCGETD 329
Query: 426 EEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTG 485
E+ ++ L++ + +++F YS+RE T A N +DDVP EVK R EL+ +
Sbjct: 330 EDFQKSVKLIERCRFKNSFIFQYSVREGTKAAANLIDDVPREVKAARNNELLAVQDRISK 389
Query: 486 QCYDSQVGTVQLVLVEGPNKKAPDTEL 512
+ +G VLVEGP+KKA ++L
Sbjct: 390 EDNQKLIGDTVEVLVEGPSKKADKSDL 416
>gi|405377519|ref|ZP_11031460.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium sp. CF142]
gi|397325956|gb|EJJ30280.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium sp. CF142]
Length = 469
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/463 (36%), Positives = 243/463 (52%), Gaps = 45/463 (9%)
Query: 59 LAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVI 118
L A E S GS + +++ +TYGCQMNV D + + GY E E A+++
Sbjct: 7 LLQAPEASLRDGS---NSRKVFIKTYGCQMNVYDSMRMSDALARDGY-ETTEDMEEADLV 62
Query: 119 FINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKI 178
+NTC IR+ A KV+ L +K K+ A GR I V GC+A+ ++I
Sbjct: 63 LLNTCHIREKAAEKVYSALGRLREMK---KRKAADGREMM-----IGVAGCVAQAEGEEI 114
Query: 179 LDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSV 234
L VDVV GP Y LP L G + I+T ++E+ + + P+ +I V
Sbjct: 115 LRRAPAVDVVIGPQTYHRLPEALRRAKEGHRVIDTEYAIEDKFEHL-PIAEAPKIRARGV 173
Query: 235 TAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN 294
TAF++V GC+ C+FC+VP+TRG E SRPV IV+E +L GV+E+TLLGQNVN+++
Sbjct: 174 TAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAMKLVDGGVREITLLGQNVNAWH 233
Query: 295 DTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKD 353
G W L DLL RL+ E P + R RYT+ HP+D
Sbjct: 234 GVG------PKGEEWSL-----------------GDLLYRLA-EIPSLARLRYTTSHPRD 269
Query: 354 FPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLS 413
D L+ RD + Y+HLP Q G+ +L+ M R +T YL L+++IR+ PD+ LS
Sbjct: 270 MDDRLIEAHRDLRTLMPYLHLPVQAGSDRILKAMNRRHTAAEYLSLIERIRKARPDIALS 329
Query: 414 SDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRL 473
DFI GF GET+ E DTL L++ V Y A+ F YS R T D VPE++K RL
Sbjct: 330 GDFITGFPGETDREFEDTLKLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEDIKAERL 388
Query: 474 TELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
L + T + +S +G +L+E P + +L+G+S
Sbjct: 389 ERLQALLLKQTQEFNESCIGKEIDLLLEKPGRMP--GQLIGRS 429
>gi|289578350|ref|YP_003476977.1| MiaB family RNA modification protein [Thermoanaerobacter italicus
Ab9]
gi|289528063|gb|ADD02415.1| RNA modification enzyme, MiaB family [Thermoanaerobacter italicus
Ab9]
Length = 471
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 246/429 (57%), Gaps = 46/429 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMNV+D E + +++ GY N+ E A+V+ NTCA+R++AE +V R++
Sbjct: 36 ETYGCQMNVHDSEKLAGMLEKMGYKYTENL-EQADVLLFNTCAVREHAEIRVLGRVSQMK 94
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRDLP 198
LK +++P I+ V GCM + + + I + +D+V G P
Sbjct: 95 ELK-------------ARNPNLIIGVSGCMMQEKNVVEAIKEKYSYIDIVFGTHNIYKFP 141
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LL E Q + ++ + + PV+ N + A+V+++ GCNN C++CIVP+TRG
Sbjct: 142 QLLWEALNSQDIVIDVIEDTKNVIEELPVKRDSN-LKAWVNIIYGCNNFCTYCIVPYTRG 200
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE+SR E IV EV EL ++G KE+TLLGQNVNSY K+++
Sbjct: 201 REKSRKPEDIVAEVKELAQKGYKEITLLGQNVNSYG------KDLDED------------ 242
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ FA LL +L+ +E E R R+ + HPKD DEL+Y MRD VC+++HLP Q
Sbjct: 243 -------ITFAKLLYKLNEIEGIE-RIRFMTSHPKDISDELIYAMRDLNKVCEHLHLPVQ 294
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
G++ +L++M R YT+E YL+++ K+R IPD+ +++D I GF GETEE+ +TL L++
Sbjct: 295 AGSNKILKKMNRKYTKEHYLEIIDKVRSNIPDIAITTDIIVGFPGETEEDFLETLDLVER 354
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D AY F YS R T A N D V + VK RL LIE + + + G +
Sbjct: 355 VRFDAAYTFIYSKRAGTVA-ANMPDQVDDAVKHERLERLIELQNKISLEKSAELRGKIVE 413
Query: 498 VLVEGPNKK 506
VL+EG +K+
Sbjct: 414 VLIEGISKR 422
>gi|319403640|emb|CBI77225.1| bifunctional enzyme [Bartonella rochalimae ATCC BAA-1498]
Length = 460
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/444 (35%), Positives = 240/444 (54%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + GY P +A++I INTC IR+ A K++ L
Sbjct: 17 KVFIKTYGCQMNVYDSQRMNDSLSAQGYIAT-QTPNDADLILINTCHIREKAAEKLYSDL 75
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++ GR+ K P I V GC+A+ ++IL VD + GP Y L
Sbjct: 76 GRLQIIRQ--------GRTHDK-PLMIGVTGCVAQAEGNEILRRAPTVDFIIGPQMYHRL 126
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL++V G+K I T ++E+ ++ + P + + ++AF++V GC+ C+FC+VP
Sbjct: 127 PELLKQVKQGKKVIETDYAVEDKFSHLPPHNKQAVRQRGISAFLTVQEGCDKFCTFCVVP 186
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR V+ I E +L + GVKE+TLLGQNVN+++ S G WRL +
Sbjct: 187 YTRGAEISRSVKQITAEAYQLIEAGVKEITLLGQNVNAWHGQS------IDGKTWRLGDL 240
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 241 LHHLAKID--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMPYLHL 283
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL+L+ KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 284 PVQSGSDRILKAMNRQHKSIHYLNLIDKIRAARPDIAFSGDFIVGFPGETDEDFEETIKL 343
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
++ VGY AY F YS R T +N+VD E VK RL L + S++
Sbjct: 344 IQQVGYSSAYSFKYSPRPGTVGATMKNHVD---ETVKNARLQHLQAILLDQQHTFLHSKI 400
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + +++G+S
Sbjct: 401 GQTTDVLIEKIGRHS--GQMIGRS 422
>gi|149914119|ref|ZP_01902650.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. AzwK-3b]
gi|149811638|gb|EDM71471.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. AzwK-3b]
Length = 446
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/448 (36%), Positives = 240/448 (53%), Gaps = 45/448 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +TYGCQMNV D E + M +AGY E + P++A++I +NTC IR+ A KV+ L
Sbjct: 6 KLYIKTYGCQMNVYDSERMAEAMGSAGYVET-DTPDDADMILLNTCHIREKAAEKVYSEL 64
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F LK ++ KI V GC+A+ D+I+ +VD+V GP +Y L
Sbjct: 65 GRFRPLK------------DARPDLKIGVAGCVAQAEGDEIMRRQPLVDLVVGPQSYHRL 112
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNS--VTAFVSVMRGCNNMCSFCIVPF 255
P+L + G + ++T L++ + + R K S TAF++V GC+ C+FC+VP+
Sbjct: 113 PQLEAQTRTGARALDTDFPLDDKFEALK-TRGPKASRGPTAFLTVQEGCDKFCAFCVVPY 171
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP I+ E EL GV+E+TLLGQNVN+Y+ T G++W L+
Sbjct: 172 TRGAEASRPAARILDEARELVDRGVREITLLGQNVNAYHGTG------PDGSDWSLARLI 225
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
++ D +D L R R+T+ HP D D+L+ + Y+HLP
Sbjct: 226 WAL-----------DAIDGLE------RIRFTTSHPNDMADDLIEAHASCAKLMPYLHLP 268
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+ +L+RM R +T E+YL L+++IR PD+ +S DFI GF ETE + T+ L+
Sbjct: 269 VQSGSDRILKRMNRKHTAESYLRLIERIRAARPDILMSGDFIVGFPEETEADFQATMDLI 328
Query: 436 KAVGYDMAYMFAYSMRERT-HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V Y AY F YS R T A R +D E+VK RL L D+ VG
Sbjct: 329 EEVKYGYAYSFKYSTRPGTPAAERAQLD---EDVKTDRLHRLQARITHHQRAIQDAMVGR 385
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRV 522
VL E P + ++VGKSD H V
Sbjct: 386 TVGVLFEKPGRLP--GQMVGKSDYLHAV 411
>gi|406911493|gb|EKD51272.1| hypothetical protein ACD_62C00293G0008 [uncultured bacterium]
Length = 445
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 247/460 (53%), Gaps = 64/460 (13%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y T+GCQMN +D +LS++ GY + V E A++I +NTC+IR AEHK++ L
Sbjct: 3 KAYIRTFGCQMNEHDSRQMLSLLAELGYEKTQEVTE-ADIIVLNTCSIRAKAEHKIYSEL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK+ + + I V GC+A++ K K+ ++D++ GPD L
Sbjct: 62 GRLRPLKKTNPQLI------------ICVAGCVAQQEKQKLSKRFPLIDIILGPDQIGTL 109
Query: 198 PRLLEE---------------VDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMR 242
P L+++ + + G + L++ + D+ PV+ +FV++ +
Sbjct: 110 PSLVQQRLLSSSEQEHCVLCHTNLKEDGDYSFLNVLPSAGDV-PVK-------SFVNIQK 161
Query: 243 GCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKE 302
GC+N C++CIVP+ RGRE SRP + I+ E+++L + GVKEVTLLGQNVNSY G+++
Sbjct: 162 GCDNFCAYCIVPYVRGRESSRPPQDIIDEINKLTERGVKEVTLLGQNVNSY----GLKE- 216
Query: 303 VEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIM 362
K+G+ F LL+ ++ + R R+ + HPKD DEL+
Sbjct: 217 --------------------KLGISFPALLEAIARQTSLKRLRFATSHPKDVSDELIAQF 256
Query: 363 RDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCG 422
P + HLP Q+G+ +L+ M R Y++E YL LV K+++ +P + S+D I GF
Sbjct: 257 AVNPILAPQFHLPLQSGSDRILKLMNRHYSQEQYLGLVAKLKKAVPHINFSTDLIVGFPS 316
Query: 423 ETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRE 482
ET+++ TL +M+ VGY Y F YS R T A + DDVP + K +RL L E RE
Sbjct: 317 ETDDDLQQTLEVMRQVGYTQTYSFVYSPRPHTTA-AHLPDDVPLQEKAQRLKTLQELDRE 375
Query: 483 STGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
Q VGTVQ VL+E + P L G++ GH+V
Sbjct: 376 VVSQLNQKDVGTVQSVLMEECRGQEPHPYL-GRTP-GHKV 413
>gi|229890696|sp|Q39D51.2|MIAB_BURS3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
Length = 457
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 248/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ + G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRESGRAQVDISFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LAAGSS 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVNHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETE++ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEDDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P +VK +RL L E+ + S VG V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLHDDTPRDVKLKRLQHLQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|403378724|ref|ZP_10920781.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Paenibacillus
sp. JC66]
Length = 493
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 250/430 (58%), Gaps = 45/430 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + +++ G+ + + A++I +NTCAIR+ AE KV+ L +
Sbjct: 56 TYGCQMNEHDTETMKGMLEAMGFQSTDD-KQQADLILLNTCAIRENAEDKVFGELGHLKT 114
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPRL 200
LK E + ++ G V GCM+ E + ++I VD++ G LP+L
Sbjct: 115 LKTE-RPSLLLG-----------VCGCMSQEEAVVNRITQKHPFVDMIFGTHNIHRLPQL 162
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
L+E + ++ + + S E + P + + V A+V++M GC+ C++CIVP+TRG+E
Sbjct: 163 LKEAYFSKEMVVEVWSKEGDIIENLPKK--REGVKAWVNIMYGCDKFCTYCIVPYTRGKE 220
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
RSR + ++ EV +L ++G +E+ LLGQNVN+Y G ++
Sbjct: 221 RSRRPQDVLAEVRDLARQGFQEIMLLGQNVNAY------------GKDF----------- 257
Query: 321 VKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+ RF DL++ +S ++ P R R+T+ HP+DF D L+ ++ + N+ ++IHLP Q+G
Sbjct: 258 -DDIDYRFGDLMNDISKIDIP--RVRFTTSHPRDFDDHLIEVLSRKGNLMEHIHLPVQSG 314
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+SA+L++M R YTRE +L+LV KI++ IPDV L++D I GF GET+E+ +T++L++ V
Sbjct: 315 SSAILKKMSRKYTREGFLELVAKIKKAIPDVVLTTDIIVGFPGETDEQFEETMSLVREVQ 374
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D A+ F YS R+ T A D+VPE VK+ RL L E E + Q + VL
Sbjct: 375 FDSAFTFIYSPRDGTPAA-AMEDNVPETVKKERLQRLNELLTELSLQSNQKLQNQIVEVL 433
Query: 500 VEGPNKKAPD 509
VEG +K PD
Sbjct: 434 VEGQSKNNPD 443
>gi|385332207|ref|YP_005886158.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinobacter adhaerens
HP15]
gi|311695357|gb|ADP98230.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinobacter adhaerens
HP15]
Length = 448
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 245/449 (54%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++K E+ + P++A+++ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLYIKTHGCQMNEYDSARMADLLKTGETVEMTDSPDDADILLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
WKK +SK P I+ V GC+A + I+D VD+V GP
Sbjct: 64 G-------RWKK------LKSKKPEMIIGVGGCVASQEGQAIIDRAPYVDMVFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTL-LSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ EV G+ + +S E + + +AFVS+M GC+ C+FC+VP+
Sbjct: 111 LPDMITEVRAKGNGVGVVDVSFPEIEKFDNLPEPGADGPSAFVSIMEGCSKYCTFCVVPY 170
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP + ++ EV L +GV+EV LLGQNVN+Y E G L+E
Sbjct: 171 TRGEEVSRPADDVIAEVAHLASQGVREVNLLGQNVNAY------RGETHDGDTMDLAELI 224
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ + D +DR+ RYT+ HP +F D L+ + P + ++HLP
Sbjct: 225 ELIATI--------DGIDRI---------RYTTSHPVEFSDALIDVYERVPELVSHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+ +L M+RG+T Y ++++R+I PD+ SSDFI GF GETE++ DT+ L+
Sbjct: 268 VQSGSDRILAAMKRGHTALEYKSKLRRLRKIRPDISFSSDFIIGFPGETEKDFEDTMKLI 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+G+DM++ F YS R T A + DD P ++K++RL+ L + ++ VG+
Sbjct: 328 NDIGFDMSFSFVYSARPGTPA-SDLPDDTPMDIKKQRLSILQDRLNQNVMDISRKMVGST 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LV G +KK P E G+++ V F
Sbjct: 387 QRILVTGLSKKDP-GEYAGRTENNRIVNF 414
>gi|163852619|ref|YP_001640662.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Methylobacterium extorquens PA1]
gi|229890613|sp|A9VYZ9.1|MIAB_METEP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|163664224|gb|ABY31591.1| RNA modification enzyme, MiaB family [Methylobacterium extorquens
PA1]
Length = 446
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 226/424 (53%), Gaps = 36/424 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y ++YGCQMN D + ++ GYS V E A+V+ +NTC IR+ A KV+ L
Sbjct: 3 KAYVKSYGCQMNAYDAGRMADVLAAEGYSATDTV-EEADVVVLNTCHIREKAAEKVYSEL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E R++S H +IVV GC+A+ +IL VDVV GP +Y L
Sbjct: 62 GRLRVLKGE--------RAESGHDTRIVVAGCVAQAEGREILSRAPAVDVVVGPQSYHRL 113
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL + + ++T E+ + D P R ++ VT F++V GC+ C+FC+VP+TR
Sbjct: 114 PDLLRQ-SRETRVVDTEFPAEDKF-DHLPARRNRG-VTGFLTVQEGCDKFCAFCVVPYTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SR V ++V E L + GV+E+TL+GQNVN+Y+ GA L
Sbjct: 171 GAEVSRSVAAVVDEARRLVEGGVREITLIGQNVNAYHGNG------PDGAPATLGH---- 220
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
L+D LS +R RYT+ HP DF D+L+ P V Y+HLP Q
Sbjct: 221 -------------LMDALSAVPGLLRLRYTTSHPNDFADDLIAAHATNPLVMPYLHLPVQ 267
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L M R +T +AY L+++IR PD+ LSSDFI GF GET+ + A+T+ L+
Sbjct: 268 SGSDRILHAMNRRHTGDAYRRLIERIRNARPDIALSSDFIVGFPGETDADFAETMRLVSD 327
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+G+ A+ F YS R T A D VPE VK RL L + + VGT+
Sbjct: 328 IGFSAAFSFKYSPRAGTPAAERE-DAVPEAVKTERLAALQDLLDRQRHAYNAASVGTLTE 386
Query: 498 VLVE 501
+LVE
Sbjct: 387 ILVE 390
>gi|206972613|ref|ZP_03233555.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus AH1134]
gi|229180049|ref|ZP_04307393.1| hypothetical protein bcere0005_33950 [Bacillus cereus 172560W]
gi|229191897|ref|ZP_04318867.1| hypothetical protein bcere0002_35540 [Bacillus cereus ATCC 10876]
gi|365159451|ref|ZP_09355631.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
sp. 7_6_55CFAA_CT2]
gi|423412423|ref|ZP_17389543.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BAG3O-2]
gi|423431792|ref|ZP_17408796.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BAG4O-1]
gi|206732426|gb|EDZ49606.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus AH1134]
gi|228591448|gb|EEK49297.1| hypothetical protein bcere0002_35540 [Bacillus cereus ATCC 10876]
gi|228603258|gb|EEK60735.1| hypothetical protein bcere0005_33950 [Bacillus cereus 172560W]
gi|363625163|gb|EHL76208.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
sp. 7_6_55CFAA_CT2]
gi|401104491|gb|EJQ12468.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BAG3O-2]
gi|401116548|gb|EJQ24386.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BAG4O-1]
Length = 509
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPDV L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDVVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|417844380|ref|ZP_12490424.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M21639]
gi|341956833|gb|EGT83249.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M21639]
Length = 474
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 245/449 (54%), Gaps = 42/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + ++ + E+ +PE A+V+ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
WK+ KH P +V V GC+A + + I VD++ GP
Sbjct: 64 G-------RWKE-------LKKHNPNLVIGVGGCVASQEGEHIRHRAPYVDIIFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ ++ G+ + + E D P ++ TAFVS+M GCN C+FC+VP+
Sbjct: 110 RLPEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCTFCVVPY 168
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRPV+ ++ E+ +L +GV+EV LLGQNVN+Y R
Sbjct: 169 TRGEEVSRPVDDVLFEIAQLADQGVREVNLLGQNVNAY----------------RGPTHD 212
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+C ++ LR +D + R R+T+ HP +F D+++ + RD P + ++HLP
Sbjct: 213 GQICSFAEL-LRLVASIDGID------RLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLP 265
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ VL M+RG+T Y +++K+R + PD+ +SSDFI GF GET E+ T+ L+
Sbjct: 266 VQAGSDRVLTMMKRGHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLI 325
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
V +DM++ F YS R T A + DDV E+ K++RL L E + Q +GT
Sbjct: 326 AQVNFDMSFSFVYSARPGTPAA-DMPDDVTEDEKKQRLYLLQERINQQAAQFSRRMLGTE 384
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEGP+KK EL G+++ V F
Sbjct: 385 QRVLVEGPSKKDI-MELTGRTETNRIVNF 412
>gi|312127450|ref|YP_003992324.1| tRNA-i(6)a37 thiotransferase enzyme miab [Caldicellulosiruptor
hydrothermalis 108]
gi|311777469|gb|ADQ06955.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
hydrothermalis 108]
Length = 471
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/437 (35%), Positives = 244/437 (55%), Gaps = 46/437 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNV+D E + ++ GY E N+ E A++I NTC++R++AE +V+ +
Sbjct: 42 TYGCQMNVHDSEKLAGMLNAMGYIETENIQE-ADLIIFNTCSVREHAESRVYGNIG---- 96
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAERLK--DKILDADKMVDVVCGPDAYRDLPR 199
R + K P I+ V GCM ++++ K+ +D++ G + P+
Sbjct: 97 ---------PLKRLKDKKPDLIIGVCGCMPQQVEVAQKLAKLFPFLDIIFGTKSLHKFPQ 147
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL +K + + E+ + P K V+AFV+++ GCNN CS+CIVP+ RGR
Sbjct: 148 LLYTAIMEKKTVIDVSEDEDVVVEGIPTA-RKQGVSAFVNIIYGCNNFCSYCIVPYVRGR 206
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E IV E+++L + GVKEVTLLGQNVNSY G
Sbjct: 207 ERSRRPEEIVYEIEQLAQNGVKEVTLLGQNVNSYGKDLGD-------------------- 246
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
G+ F LL++++ R R+ + HPKD DEL+ MRD VC++IHLP Q+G
Sbjct: 247 -----GITFPKLLEKVNEIKGIERIRFVTSHPKDLSDELIVAMRDLEKVCEHIHLPVQSG 301
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L+ M R YT+E YL L++K++ IPD+ +++D I GF GET+E+ DTL + + V
Sbjct: 302 STRILKAMNRHYTKEDYLRLIEKLKTNIPDIAITTDIIVGFPGETDEDFEDTLDVCRKVE 361
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D AY F YS R T A + + VP+++K++R L++ + + +G VL
Sbjct: 362 FDSAYTFIYSKRRGTPAEK-MPNQVPDDIKRQRFQRLVKLVEDIALKKNRQMLGKTYEVL 420
Query: 500 VEGPNKKAPDTELVGKS 516
++G +K+ + LVG++
Sbjct: 421 IDGQSKR--NNLLVGRT 435
>gi|336417729|ref|ZP_08598014.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 11_3_2]
gi|336164676|gb|EGN67578.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 11_3_2]
Length = 435
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 242/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY ++ +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DITEEIDNADAVFLNTCTVREGAAIQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVKGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L +M RGYT+E YL LV KI+ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL L+E + + +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIDESVKKERLQRLMEVQNKCSFNESSKYKDKIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 381 RVLVEGPSKKNKEV-LSGRTSTNKIVLF 407
>gi|171321297|ref|ZP_02910259.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
MEX-5]
gi|171093424|gb|EDT38607.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia ambifaria
MEX-5]
Length = 457
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 246/449 (54%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K + G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPGLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDQRRASGRAQVDISFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGST 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVSHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETE + + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDMIVGFPGETEADFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P EVK +RL L E+ + S VG V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLHDDTPREVKLKRLQHLQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELSGRTENNRVVNF 414
>gi|167754516|ref|ZP_02426643.1| hypothetical protein CLORAM_00017 [Clostridium ramosum DSM 1402]
gi|365830819|ref|ZP_09372382.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Coprobacillus sp.
3_3_56FAA]
gi|374627246|ref|ZP_09699653.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Coprobacillus sp.
8_2_54BFAA]
gi|167705348|gb|EDS19927.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium ramosum DSM
1402]
gi|365262829|gb|EHM92701.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Coprobacillus sp.
3_3_56FAA]
gi|373913269|gb|EHQ45107.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Coprobacillus sp.
8_2_54BFAA]
Length = 481
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 250/451 (55%), Gaps = 48/451 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y +TYGCQ N D E + I+++ Y + E A+VI +NTCAIR+ AE KV+ ++
Sbjct: 45 KYYIQTYGCQANERDSETLSGILESMSYQPTTEIKE-ADVIVLNTCAIRENAEEKVFGKV 103
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVL-GCMA--ERLKDKILDADKMVDVVCGPDAY 194
Y LK+ +P I + GCMA E + ++IL+ VD++ G
Sbjct: 104 GYVKNLKK-------------TNPNLIFAMCGCMAQEEVVVNRILEKHPHVDLIFGTHNI 150
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP LL++ Y ++ I + S E + +PVR N A+V++M GCN C++CIVP
Sbjct: 151 HRLPELLKDALYSKEMIVEVWSKEGDVIENAPVR-RDNKYKAWVNIMYGCNKFCTYCIVP 209
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR + I+KEV+EL EG +E+TLLGQNVNSY L E
Sbjct: 210 YTRGKERSRLAKDIIKEVEELVAEGYQEITLLGQNVNSYGKD--------------LGED 255
Query: 315 FNSMCKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
+N F++LL+ ++ P R R+T+ HP DF ++++ I+ N+ IH
Sbjct: 256 YN-----------FSNLLEDVAKTNIP--RIRFTTSHPWDFSEDMIKIIAKYDNIMPAIH 302
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+GN+ VL+ M R Y+RE YL+L KI++ IPD +++D I GF ET E++ DTL+
Sbjct: 303 LPVQSGNNEVLKLMGRRYSREQYLELFHKIKEYIPDCTVTTDIIVGFPNETHEQYLDTLS 362
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L + YD+AY F YS R T A + VD+V + K +RL +L E E + +
Sbjct: 363 LYQECEYDLAYTFVYSPRAGTPAAK-MVDNVASDEKDQRLYKLNEIVNEKAYKQNQRFLN 421
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +KK D+ L G + V F
Sbjct: 422 KIVEVLVEGTSKK-DDSMLTGYTRHQKLVNF 451
>gi|218234533|ref|YP_002368575.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cereus B4264]
gi|229890421|sp|B7HDP7.1|MIAB_BACC4 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|218162490|gb|ACK62482.1| conserved hypothetical protein [Bacillus cereus B4264]
Length = 509
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPDV L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDVVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|423437227|ref|ZP_17414208.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BAG4X12-1]
gi|401120382|gb|EJQ28178.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BAG4X12-1]
Length = 509
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPDV L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDVVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|49478367|ref|YP_037833.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|52141716|ref|YP_085113.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cereus E33L]
gi|196038441|ref|ZP_03105750.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
gi|81395139|sp|Q6HF43.1|MIAB_BACHK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|81686624|sp|Q636Q4.1|MIAB_BACCZ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|49329923|gb|AAT60569.1| conserved hypothetical protein, possible tRNA 2-methylthioadenine
synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51975185|gb|AAU16735.1| conserved hypothetical protein; possible tRNA 2-methylthioadenine
synthetase [Bacillus cereus E33L]
gi|196030849|gb|EDX69447.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
Length = 509
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKALKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + D G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNDRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|334131287|ref|ZP_08505052.1| Putative tRNA-i-6-A37 thiotransferase enzyme MiaB
[Methyloversatilis universalis FAM5]
gi|333443636|gb|EGK71598.1| Putative tRNA-i-6-A37 thiotransferase enzyme MiaB
[Methyloversatilis universalis FAM5]
Length = 449
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 242/449 (53%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+IY +T+GCQMN D + + ++ +A E + PE A+VI NTC++R+ A+ KV+ L
Sbjct: 4 KIYIKTFGCQMNEYDSDKMADVLGDAEGLEKTDRPEEADVILFNTCSVREKAQEKVFHDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LKRE N+ G V GC+A + I++ VD+V GP L
Sbjct: 64 GRVKHLKRE-NPNLIIG-----------VGGCVASQEGAAIVERAPYVDLVFGPQTLHRL 111
Query: 198 PRLLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L+ + G+ ++ E + + P R+ TAFVS+M GC+ C+FC+VP+T
Sbjct: 112 PDLISKRRASGRPQVDISFPEIEKFDHMPPARV--EGATAFVSIMEGCSKYCTFCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ I+ E+ L +GVKEVTLLGQNVN+ WR +
Sbjct: 170 RGEEVSRPLDDILTEIATLVGQGVKEVTLLGQNVNA----------------WRAPISRD 213
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
S +G FA LL+ + E P + R RYT+ HP++ ++ P + +HLP
Sbjct: 214 S----DDIG-DFAFLLECVH-EVPGIERIRYTTSHPREMTQRVIDAYAKLPKLVSQLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+ VL M+RGYT Y +V+K+R PD+ L+SDFI GF GETEE+ T+ L+
Sbjct: 268 VQSGSDRVLAAMKRGYTALEYKAVVRKLRAARPDLSLTSDFIVGFPGETEEDFEKTMKLI 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
VG+D ++ F YS R T A + DD P+EVK RL L + E + VGTV
Sbjct: 328 DDVGFDGSFSFVYSARPGTPAA-DLADDTPQEVKLARLARLQKRIDEQAQAVSQTMVGTV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LVEG +K TEL G++D V F
Sbjct: 387 QRILVEGHARKDA-TELAGRTDNNRVVNF 414
>gi|228954049|ref|ZP_04116078.1| hypothetical protein bthur0006_34210 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|423425910|ref|ZP_17402941.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BAG3X2-2]
gi|423503549|ref|ZP_17480141.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus HD73]
gi|449090716|ref|YP_007423157.1| hypothetical protein HD73_4058 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228805615|gb|EEM52205.1| hypothetical protein bthur0006_34210 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401110657|gb|EJQ18556.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BAG3X2-2]
gi|402458903|gb|EJV90643.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus HD73]
gi|449024473|gb|AGE79636.1| hypothetical protein HD73_4058 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 509
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPDV L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDVVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|260914514|ref|ZP_05920983.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pasteurella dagmatis ATCC
43325]
gi|260631615|gb|EEX49797.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pasteurella dagmatis ATCC
43325]
Length = 474
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 249/449 (55%), Gaps = 42/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + ++ + E+ ++PE A+V+ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLNSTHGLELTDIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
WK+ KH P +V V GC+A + + I VD++ GP
Sbjct: 64 G-------RWKE-------LKKHKPGLVIGVGGCVASQEGEHIRTRAPYVDIIFGPQTLH 109
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ ++ G+ + + E D P ++ TAFVS+M GCN CSFC+VP+
Sbjct: 110 RLPEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCSFCVVPY 168
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y R +
Sbjct: 169 TRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAY----------------RGATHD 212
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ +C ++ LR +D + R R+T+ HP +F D+++ + RD P + ++HLP
Sbjct: 213 DGICTFAEL-LRLVAAIDGID------RLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLP 265
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+ VL M+R +T Y +++K+R + P++ +SSDFI GF GET E+ T+ L+
Sbjct: 266 VQSGSDRVLSMMKRNHTALEYKSIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMNLI 325
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
V +DM++ F YS R T A + DDV E+ K++RL L + Q + +GT
Sbjct: 326 AQVNFDMSFSFIYSARPGTPAA-DMPDDVSEDEKKQRLYVLQQRINNQAAQFSRAMLGTE 384
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEGP+KK EL G+++ V F
Sbjct: 385 QRVLVEGPSKKDL-MELTGRTETNRIVNF 412
>gi|261400545|ref|ZP_05986670.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria lactamica ATCC
23970]
gi|269209614|gb|EEZ76069.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Neisseria lactamica ATCC
23970]
Length = 430
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 240/428 (56%), Gaps = 48/428 (11%)
Query: 88 MNVNDMEIVLSIM-KNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKRE 146
MN D + +L+++ + G E + P++A++I NTC++R+ A+ KV+ L LK
Sbjct: 1 MNEYDSDKMLAVLAEEHGGIEQVTQPDDADIILFNTCSVREKAQEKVFSDLGRVRPLK-- 58
Query: 147 WKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVD 205
K+P I+ V GC+A + + I+ VDVV GP LP+++ VD
Sbjct: 59 -----------EKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLHRLPKMI--VD 105
Query: 206 YGQKGINTL-LSLEET--YADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERS 262
G++ + +S E + + P R+ + AFVS+M GC+ CSFC+VP+TRG E S
Sbjct: 106 KETSGLSQVDISFPEIEKFDHLPPARVEGGA--AFVSIMEGCSKYCSFCVVPYTRGEEFS 163
Query: 263 RPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVK 322
RP+ ++ E+ L ++GVKE+ LLGQNVN+Y E+E G +C
Sbjct: 164 RPLNDVLTEIAGLVQQGVKEINLLGQNVNAYRG------EMENG----------EICD-- 205
Query: 323 KMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNS 381
FA LL R+ E P + R R+T+ HP++F D ++ RD P + ++HLP Q+G+
Sbjct: 206 -----FATLL-RIVHEIPGIERLRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSD 259
Query: 382 AVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYD 441
VL M+RGYT Y +++K+R I PD+ LSSDFI GF GETE E TL L+K + +D
Sbjct: 260 RVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFD 319
Query: 442 MAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVE 501
++++F YS R T A N DD P E K RRL L E T + + VGTVQ LVE
Sbjct: 320 LSFVFIYSPRPGTPAA-NLPDDTPHEEKVRRLEALNEVIEAETARINQTMVGTVQRCLVE 378
Query: 502 GPNKKAPD 509
G +KK PD
Sbjct: 379 GISKKDPD 386
>gi|312793678|ref|YP_004026601.1| tRNA-i(6)a37 thiotransferase enzyme miab [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180818|gb|ADQ40988.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 471
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 243/437 (55%), Gaps = 46/437 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNV+D E + ++ GY E N+ E A++I NTC++R++AE +V+ +
Sbjct: 42 TYGCQMNVHDSEKLAGMLNAMGYIETENIQE-ADLIIFNTCSVREHAESRVYGNIG---- 96
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAERLK--DKILDADKMVDVVCGPDAYRDLPR 199
R + K P I+ V GCM ++++ K+ +D++ G + P+
Sbjct: 97 ---------PLKRLKDKKPDLIIGVCGCMPQQVEVAQKLAKLFPFLDIIFGTKSLHKFPQ 147
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL +K + + E+ + P + V+AFV+++ GCNN CS+CIVP+ RGR
Sbjct: 148 LLYTAITEKKTVIDVSEDEDVVVEGIPTA-RRQGVSAFVNIIYGCNNFCSYCIVPYVRGR 206
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+ E+++L + GVKEVTLLGQNVNSY G
Sbjct: 207 ERSRRPEEIIYEIEQLAQNGVKEVTLLGQNVNSYGKDLGN-------------------- 246
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
G+ F LL++++ R R+ + HPKD DEL+ MRD VC++IHLP Q+G
Sbjct: 247 -----GITFPKLLEKVNEIEGIERIRFVTSHPKDLSDELIVAMRDLEKVCEHIHLPVQSG 301
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L+ M R YT+E YL LV+K++ IPD+ +++D I GF GET+E+ DTL + + V
Sbjct: 302 STRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDEDFEDTLDVCRKVE 361
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D AY F YS R T A + + VP+++K +R L++ E + +G +L
Sbjct: 362 FDSAYTFIYSKRRGTPAEK-MPNQVPDDIKHQRFQRLVKLVEEIALKKNRQMLGKTYEIL 420
Query: 500 VEGPNKKAPDTELVGKS 516
++G +K+ + LVG++
Sbjct: 421 IDGHSKR--NNLLVGRT 435
>gi|407683259|ref|YP_006798433.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii str. 'English Channel 673']
gi|407244870|gb|AFT74056.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii str. 'English Channel 673']
Length = 477
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 251/448 (56%), Gaps = 40/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNA-GYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
++Y +T+GCQMN D E + ++ + GYS E+A+VI +NTC+IR+ A+ KV+ +
Sbjct: 4 KLYIKTWGCQMNEYDSEKMADLLDSTHGYSAA-ETAEDADVILLNTCSIREKAQEKVFHQ 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L + LK Q K I V GC+A + D I VD+V GP
Sbjct: 63 LGRWKTLK------------QDKPELIIGVGGCVASQEGDTIRQRAPFVDLVFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP ++ ++ G K + + E D P ++ TAFVS+M GC+ C+FC+VP+T
Sbjct: 111 LPEMINQLQGGAKSVIDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCSKYCTFCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRPV+ ++ E+ +L +GV+EV LLGQNVN+Y G N+
Sbjct: 170 RGEEVSRPVDDVLLEIAQLAGQGVREVNLLGQNVNAYR-----------GENYD-----G 213
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
++C RF++LL+ ++ R RYT+ HP +F D+++ P + ++HLP
Sbjct: 214 TIC-------RFSELLELVAAIDGIDRIRYTTSHPVEFTDDIIEAYASIPELVDHLHLPV 266
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L M+RG+T Y ++K+++I P++ LSSDFI GF GET+ + T+ L++
Sbjct: 267 QSGSDRILNLMKRGHTAIEYKSKMRKLKKIRPNISLSSDFIIGFPGETDADFEATMDLIQ 326
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
AV YD+++ F YS R T A + VDDV EE K++RL L + + + VGT Q
Sbjct: 327 AVDYDLSFSFIYSARPGTPAA-DAVDDVSEETKKQRLHLLQQRITQQALRIARHMVGTEQ 385
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+LVEGP+KK P EL G+++ V F
Sbjct: 386 RILVEGPSKKNP-MELSGRTENNRVVNF 412
>gi|333983213|ref|YP_004512423.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Methylomonas
methanica MC09]
gi|333807254|gb|AEF99923.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Methylomonas methanica MC09]
Length = 458
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 158/449 (35%), Positives = 248/449 (55%), Gaps = 42/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T GCQMN D + + ++ + E+ ++PE A+V+ +NTC+IR+ A+ KV+ +
Sbjct: 4 KLYIQTNGCQMNEYDSDKMRDVLLASHGLELTDIPEQADVLLLNTCSIREKAQEKVFSAV 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
WKK + K P I+ V GC+A + I VD+V GP
Sbjct: 64 G-------RWKK------IKDKRPEVIIGVGGCVASQEGAAIQKRAPYVDIVFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTLLSLE-ETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP LL + G + + E E + ++ R AFVSVM GC+ C++C+VP+
Sbjct: 111 LPELLNKARNGDSHVVDISFPEIEKFDNLPEPR--AEGPKAFVSVMEGCSKYCTYCVVPY 168
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP++ ++ E++ L +GV+E+ LLGQNVN+Y E+E G +
Sbjct: 169 TRGEEVSRPLKHVIAEIETLAAQGVREINLLGQNVNAYRG------EMEDGDIASFA--- 219
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ L F ++ + R R+T+ HP +F D+++ + P + ++HLP
Sbjct: 220 --------LLLHFVAAVEGID------RIRFTTSHPLEFTDDIIDAFAEIPQLVNHLHLP 265
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L M+RG+ RE YL++++KI+ P + LSSDFI GF GETE++ DT+ L+
Sbjct: 266 VQSGSNRILAEMKRGHAREDYLEIMRKIKAARPGISLSSDFIIGFPGETEQDFEDTMALI 325
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ VG+D +Y F +S R T A NY DDV +VK+RRL L E +S +G+V
Sbjct: 326 EEVGFDFSYSFIFSARPGTPA-ANYPDDVSMDVKERRLQRLKTRLNEMFLAISESMIGSV 384
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEG +KK P L G+++ V F
Sbjct: 385 QSVLVEGVSKKNP-LHLTGRTENNRVVNF 412
>gi|375308307|ref|ZP_09773593.1| tRNA-i(6)a37 thiotransferase enzyme miab [Paenibacillus sp.
Aloe-11]
gi|375079731|gb|EHS57953.1| tRNA-i(6)a37 thiotransferase enzyme miab [Paenibacillus sp.
Aloe-11]
Length = 517
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/414 (37%), Positives = 237/414 (57%), Gaps = 46/414 (11%)
Query: 75 SQGRIY-QETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
QG+ Y T+GCQMN +D E + +++ GY + E A++I +NTCAIR+ AE KV
Sbjct: 71 GQGKHYIVYTFGCQMNEHDSETIKGLLEQMGYQATEDRKE-ADIILLNTCAIRENAEDKV 129
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ L + LK E K + G V GCM+ E + ++I+ VD++ G
Sbjct: 130 FGELGHLKHLKTE-KPGLLLG-----------VCGCMSQEENVVNRIMQKHGFVDMIFGT 177
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP+L++E + ++ + + S E + P + + + A+V++M GC+ C++C
Sbjct: 178 HNIHRLPQLVKEALFSKEMVVEVWSKEGDIIENLPKK--REGMRAWVNIMYGCDKFCTYC 235
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVPFTRG+ERSR E ++ EV +L ++G KE+TLLGQNVN+Y
Sbjct: 236 IVPFTRGKERSRRPEDVIAEVRDLARQGFKEITLLGQNVNAYGKD--------------- 280
Query: 312 SEGFNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ M RF DL+D + + P R R+T+ HP+DF D L+ ++ N+ +
Sbjct: 281 ---------LTDMNYRFGDLMDDMRKINIP--RVRFTTSHPRDFDDHLVEVLGKGGNLVE 329
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+GN+ +L++M R YTRE L+L KI+ +P V L++D I GF GET+E+ D
Sbjct: 330 HIHLPVQSGNTDILKKMNRKYTRERVLELAAKIKAAVPHVSLTTDIIVGFPGETDEQFED 389
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
TL+L++ VGYD AY F YS RE T A + D+VP EVK+ RL L + E++
Sbjct: 390 TLSLVREVGYDFAYTFIYSPREGTPA-ASMEDNVPMEVKKERLQRLNKVVNENS 442
>gi|225865753|ref|YP_002751131.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus 03BB102]
gi|225786232|gb|ACO26449.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus 03BB102]
Length = 509
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLVANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + D G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNDRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|417840132|ref|ZP_12486285.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M19107]
gi|341950137|gb|EGT76729.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M19107]
Length = 474
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 245/447 (54%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + ++ + E+ +PE A+V+ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ LK+ K N+ G V GC+A + + I VD++ GP L
Sbjct: 64 GRWKELKKN-KPNLVIG-----------VGGCVASQEGEHIRHRAPYVDIIFGPQTLHRL 111
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ ++ G+ + + E D P ++ TAFVS+M GCN C+FC+VP+TR
Sbjct: 112 PEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCTFCVVPYTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRPV+ ++ E+ +L +GV+EV LLGQNVN+Y R
Sbjct: 171 GEEVSRPVDDVLFEIAQLADQGVREVNLLGQNVNAY----------------RGPTHDGQ 214
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+C ++ LR +D + R R+T+ HP +F D+++ + RD P + ++HLP Q
Sbjct: 215 ICSFAEL-LRLVASIDGID------RLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQ 267
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
G+ VL M+RG+T Y +++K+R + PD+ +SSDFI GF GET E+ T+ L+
Sbjct: 268 AGSDRVLTMMKRGHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQ 327
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +DM++ F YS R T A + DDV E+ K++RL L E + Q +GT Q
Sbjct: 328 VNFDMSFSFVYSARPGTPAA-DMPDDVTEDEKKQRLYVLQERINQQAAQFSRRMLGTEQR 386
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK EL G+++ V F
Sbjct: 387 VLVEGPSKKDI-MELTGRTETNRIVNF 412
>gi|228986916|ref|ZP_04147043.1| hypothetical protein bthur0001_35910 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229157351|ref|ZP_04285429.1| hypothetical protein bcere0010_35340 [Bacillus cereus ATCC 4342]
gi|228626078|gb|EEK82827.1| hypothetical protein bcere0010_35340 [Bacillus cereus ATCC 4342]
gi|228772865|gb|EEM21304.1| hypothetical protein bthur0001_35910 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 509
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + D G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNDRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|196034172|ref|ZP_03101582.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus W]
gi|196044479|ref|ZP_03111714.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus 03BB108]
gi|218904900|ref|YP_002452734.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cereus AH820]
gi|228916410|ref|ZP_04079977.1| hypothetical protein bthur0012_36250 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928822|ref|ZP_04091854.1| hypothetical protein bthur0010_35140 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935069|ref|ZP_04097899.1| hypothetical protein bthur0009_35230 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228947493|ref|ZP_04109783.1| hypothetical protein bthur0007_36210 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229123286|ref|ZP_04252490.1| hypothetical protein bcere0016_35750 [Bacillus cereus 95/8201]
gi|229186011|ref|ZP_04313181.1| hypothetical protein bcere0004_35580 [Bacillus cereus BGSC 6E1]
gi|301055262|ref|YP_003793473.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus biovar
anthracis str. CI]
gi|376267665|ref|YP_005120377.1| tRNA-i(6)A37 methylthiotransferase [Bacillus cereus F837/76]
gi|423550478|ref|ZP_17526805.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus ISP3191]
gi|229890419|sp|B7JJ50.1|MIAB_BACC0 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890697|sp|A0RHE4.2|MIAB_BACAH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|195993246|gb|EDX57204.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus W]
gi|196024514|gb|EDX63186.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus 03BB108]
gi|218534759|gb|ACK87157.1| conserved hypothetical protein [Bacillus cereus AH820]
gi|228597430|gb|EEK55080.1| hypothetical protein bcere0004_35580 [Bacillus cereus BGSC 6E1]
gi|228660062|gb|EEL15698.1| hypothetical protein bcere0016_35750 [Bacillus cereus 95/8201]
gi|228812013|gb|EEM58344.1| hypothetical protein bthur0007_36210 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824639|gb|EEM70441.1| hypothetical protein bthur0009_35230 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830629|gb|EEM76234.1| hypothetical protein bthur0010_35140 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843213|gb|EEM88294.1| hypothetical protein bthur0012_36250 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|300377431|gb|ADK06335.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus biovar
anthracis str. CI]
gi|364513465|gb|AEW56864.1| tRNA-i(6)A37 methylthiotransferase [Bacillus cereus F837/76]
gi|401190094|gb|EJQ97144.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus ISP3191]
Length = 509
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + D G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNDRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|118478993|ref|YP_896144.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
thuringiensis str. Al Hakam]
gi|118418218|gb|ABK86637.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus thuringiensis
str. Al Hakam]
Length = 524
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 82 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 140
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 141 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 187
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 188 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 246
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 247 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 295
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 296 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 341
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 342 PVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 401
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + D G
Sbjct: 402 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNDRYKGQ 460
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 461 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 489
>gi|218898872|ref|YP_002447283.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cereus G9842]
gi|228902275|ref|ZP_04066435.1| hypothetical protein bthur0014_34530 [Bacillus thuringiensis IBL
4222]
gi|228909596|ref|ZP_04073419.1| hypothetical protein bthur0013_37480 [Bacillus thuringiensis IBL
200]
gi|228966715|ref|ZP_04127759.1| hypothetical protein bthur0004_35210 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|402558900|ref|YP_006601624.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
thuringiensis HD-771]
gi|423359242|ref|ZP_17336745.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD022]
gi|423561820|ref|ZP_17538096.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus MSX-A1]
gi|434376830|ref|YP_006611474.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
thuringiensis HD-789]
gi|229890420|sp|B7ITM4.1|MIAB_BACC2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|218543596|gb|ACK95990.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus G9842]
gi|228792814|gb|EEM40372.1| hypothetical protein bthur0004_35210 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228849885|gb|EEM94716.1| hypothetical protein bthur0013_37480 [Bacillus thuringiensis IBL
200]
gi|228857390|gb|EEN01890.1| hypothetical protein bthur0014_34530 [Bacillus thuringiensis IBL
4222]
gi|401085114|gb|EJP93360.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD022]
gi|401202077|gb|EJR08942.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus MSX-A1]
gi|401787552|gb|AFQ13591.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
thuringiensis HD-771]
gi|401875387|gb|AFQ27554.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
thuringiensis HD-789]
Length = 509
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 252/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y ++VE G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDVEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|332526540|ref|ZP_08402652.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rubrivivax
benzoatilyticus JA2]
gi|332110808|gb|EGJ10985.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rubrivivax
benzoatilyticus JA2]
Length = 444
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 239/449 (53%), Gaps = 43/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y T+GCQMN D + ++ AG E + PE A+++ NTC++R+ A+ KV+ L
Sbjct: 3 KVYIRTFGCQMNEYDSAKMADVLNAAGGYEPTDDPEQADLVLFNTCSVREKAQEKVFSDL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK KK V G V GC+A + I++ VD+V GP L
Sbjct: 63 GRVKHLK---KKGVLIG-----------VGGCVASQEGAAIIERAPYVDMVFGPQTLHRL 108
Query: 198 PRLLEEVDYGQK-GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+++ ++ ++ E + + P RI S AFVS+M GC+ C++C+VP+T
Sbjct: 109 PQMIAARSNERRPQVDISFPEIEKFDHLPPPRIEGAS--AFVSIMEGCSKYCTYCVVPYT 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP E ++ EV +L GVKEVTLLGQNVN+Y G E+
Sbjct: 167 RGEEVSRPFEDVLTEVADLADRGVKEVTLLGQNVNAYRGAMGESGEIA------------ 214
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
A LL+ ++ E P + R R+T+ HP +F L+ P + ++HLP
Sbjct: 215 ----------DLALLLEYVA-EVPGIERIRFTTSHPNEFTQRLIEAYGRIPKLVSHLHLP 263
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y ++K+R+ P + LSSDFI GF GETE++ A T+ L+
Sbjct: 264 VQHGSDRILSAMKRGYTALEYKSTIRKLREQRPGISLSSDFIVGFPGETEDDFAKTMKLI 323
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
VGYD ++ F YS R T A DD P+E+K RL L A + + S+VGT
Sbjct: 324 DDVGYDASFSFVYSQRPGTPAA-ALDDDTPQELKLARLQTLQAAIEANVRRISASRVGTR 382
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LVEGP+KK P EL+G+++ V F
Sbjct: 383 QTILVEGPSKKNPQ-ELMGRTECNRIVNF 410
>gi|424897989|ref|ZP_18321563.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393182216|gb|EJC82255.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 469
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 249/463 (53%), Gaps = 45/463 (9%)
Query: 59 LAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVI 118
L PA E GS + +++ +TYGCQMNV D + + GY ++ E A+++
Sbjct: 7 LLPAPEQMLRDGS---NSRKVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDM-EEADLV 62
Query: 119 FINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKI 178
+NTC IR+ A KV+ L +K K+ A GR I V GC+A+ ++I
Sbjct: 63 LLNTCHIREKAAEKVYSALGRLRDMK---KRKAADGREM-----MIGVAGCVAQAEGEEI 114
Query: 179 LDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSV 234
L VDVV GP Y LP L GQ+ ++T ++E+ + + P+ +I V
Sbjct: 115 LRRAPAVDVVIGPQTYHRLPEALRRAKEGQRVVDTEYAIEDKFEHL-PIAESKKIRARGV 173
Query: 235 TAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN 294
TAF++V GC+ C+FC+VP+TRG E SRPV IV+E ++L + GV+E+TLLGQNVN+++
Sbjct: 174 TAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAEKLVEGGVREITLLGQNVNAWH 233
Query: 295 DTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKD 353
G W L DLL RL+ E P + R RYT+ HP+D
Sbjct: 234 GAGPQ------GEAWSL-----------------GDLLYRLA-EIPGLARLRYTTSHPRD 269
Query: 354 FPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLS 413
D L+ RD + Y+HLP Q+G+ +L+ M R +T YL L+++IR + PD+ LS
Sbjct: 270 MDDRLINAHRDLRALMPYLHLPVQSGSDRILKAMNRRHTAAEYLTLIERIRAVRPDIALS 329
Query: 414 SDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRL 473
DFI GF GET+ + DTL L++ V Y A+ F YS R T D VPE++K RL
Sbjct: 330 GDFITGFPGETDADFEDTLRLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEQIKAERL 388
Query: 474 TELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
L + + +S VG +L+E P + P+ +L+G+S
Sbjct: 389 ERLQALLLKQQQEFAESCVGKEIELLLEKPG-RMPE-QLIGRS 429
>gi|320107085|ref|YP_004182675.1| MiaB family RNA modification protein [Terriglobus saanensis SP1PR4]
gi|319925606|gb|ADV82681.1| RNA modification enzyme, MiaB family [Terriglobus saanensis SP1PR4]
Length = 452
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 243/448 (54%), Gaps = 48/448 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
Y ET+GCQMN +D E V+ +++ GY+ V + E A +I NTC+IRD AE KV+ RLN
Sbjct: 18 FYIETFGCQMNAHDSEKVIGTLEHEGYTRVED-EEAAGLILYNTCSIRDKAEQKVFHRLN 76
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
E+KK G+ K V+GC+A++ +KI + V +V G +YR+LP
Sbjct: 77 -------EYKKMQGEGK-------KFAVIGCVAQQEGEKIFEKAPYVSLVSGSASYRNLP 122
Query: 199 RLLEEVDYGQKGINTL--LSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
+L ++ G+ I L +ET+ R N +++++ GC+ CS+C+VP+T
Sbjct: 123 EMLVRLEAGENRITGLDDRQTDETFDTEFTAR--SNPHRGYITIIEGCDKFCSYCVVPYT 180
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG+ERSR +S++ E + G ++ LLGQNVNSY D+SG
Sbjct: 181 RGKERSRTSDSVLAEARRMADMGYTDIQLLGQNVNSYRDSSGKRT--------------- 225
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
FA++L + R R+T+ HP+DF +++ ++ P VC ++HLP
Sbjct: 226 -----------FAEVLGAIGQMAGVRRVRFTTSHPRDFTQDIIDVIDAVPQVCDHVHLPV 274
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S VL+ M+R YTRE YL+ + I+ ++ +++D I GF GETEE+ T +L+
Sbjct: 275 QSGSSIVLKAMQREYTREWYLERIAWIKAAKREISMTTDIIVGFPGETEEDFEQTASLLD 334
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGYD + F YS R T A + + V EVK RL L++ RE Y +G V
Sbjct: 335 EVGYDGVFAFQYSPRPNTPAI-HMEETVGVEVKAARLQRLMDRQRELQRISYGRHLGQVM 393
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V+VEG N++ ++ G+S + V F
Sbjct: 394 EVMVEGYNRQRG--QVTGRSSQNKTVNF 419
>gi|169632399|ref|YP_001706135.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acinetobacter
baumannii SDF]
gi|229890410|sp|B0VQX2.1|MIAB_ACIBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|169151191|emb|CAO99868.1| putative tRNA-i(6)A37 modification enzyme (MiaB) [Acinetobacter
baumannii]
Length = 483
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 261/477 (54%), Gaps = 49/477 (10%)
Query: 57 ADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAE 116
A A + V+ T + S ++Y ET GCQMN D + ++ ++ + N P A+
Sbjct: 11 AKAASENTVTQPTHTTDVSIKKLYIETQGCQMNEYDSHRMADLLGDSHGYVLTNNPNEAD 70
Query: 117 VIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKD 176
++ +NTC+IR+ A+ KV+ L W +E ++ G V GC+A + D
Sbjct: 71 ILLMNTCSIREKAQEKVFSELGR-WRKLKEQNPDLVIG-----------VGGCVASQEGD 118
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEE----VDYGQKGINTLLSLEETYADISPVRISKN 232
I VD++ GP LP++L++ V+ +K L+ + ++ DI
Sbjct: 119 NIQKRAPYVDMIFGPQTLHRLPQMLDQHHAQVEKPKKEKIKLVDI--SFPDIEKFDFLPE 176
Query: 233 ----SVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQ 288
AFVS+M GC+ CSFC+VP+TRG E SRP++ ++ E+ L ++GV+E++LLGQ
Sbjct: 177 PRVEGFKAFVSIMEGCSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAEKGVREISLLGQ 236
Query: 289 NVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYT 347
NVN Y G + EG +C F +LL RL E P + R RYT
Sbjct: 237 NVNGYR-----------GETF---EG--GICT-------FPELL-RLVAEIPGIGRLRYT 272
Query: 348 SPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII 407
+ HP +F DEL+ D P + ++HLP Q+G++ VL+ M+R +T + Y+D + K+R+I
Sbjct: 273 TSHPLEFSDELIQCYEDLPQMVSHLHLPVQSGSNDVLKAMKRNHTIDVYIDKIAKLRKIR 332
Query: 408 PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEE 467
PD+ LSSDFI GF GET+E A+TL +K +G+D +Y F YS R T A + D PE
Sbjct: 333 PDMHLSSDFIIGFPGETDENFAETLQFIKDLGFDHSYSFVYSKRPGTPA-SDLPDTTPEH 391
Query: 468 VKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VK+ RL ++ + ++S+ + D+ +G ++ VL+E + + P+ LVG +D V F
Sbjct: 392 VKKERLAQVQQVIKQSSIEKTDAMLGKIERVLIEKVSDQDPNI-LVGTADNTRLVTF 447
>gi|75760978|ref|ZP_00740984.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491542|gb|EAO54752.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 515
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 252/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 82 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 140
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 141 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 187
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 188 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 246
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y ++VE G
Sbjct: 247 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDVEYG-------- 295
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 296 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 341
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 342 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 401
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 402 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 460
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 461 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 489
>gi|254479226|ref|ZP_05092571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydibrachium
pacificum DSM 12653]
gi|214034827|gb|EEB75556.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydibrachium
pacificum DSM 12653]
Length = 471
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 242/431 (56%), Gaps = 44/431 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMNV+D E + +++ GY ++ E A+V+ NTCA+R++AE +V R++
Sbjct: 36 ETYGCQMNVHDSEKLAGMLEEMGYKYTEDL-EKADVLLFNTCAVREHAEVRVLGRVSQIK 94
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMAE--RLKDKILDADKMVDVVCGPDAYRDLP 198
LK +++P I+ + GCM + + + I + VD+V G P
Sbjct: 95 ELK-------------NRNPNLIIGISGCMMQEKHIVEAIREKYPHVDIVFGTHNIYKFP 141
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
LL + + + ++ + + P+R N + A+V+++ GCNN C++CIVP+TRG
Sbjct: 142 ELLWQALNSRVQVIDVIENTQNVIEGLPIRRDSN-LKAWVNIIYGCNNFCTYCIVPYTRG 200
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE+SR E I+ EV EL ++G KE+TLLGQNVNSY G +
Sbjct: 201 REKSRRPEDIIAEVKELAEKGYKEITLLGQNVNSYGKDLGGD------------------ 242
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
+ FA LL L+ R R+ + HPKD DEL+Y MRD VC+++HLP Q
Sbjct: 243 -------INFAKLLYMLNDIKGIERIRFMTSHPKDISDELIYAMRDLDKVCEHLHLPVQA 295
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ +L+RM R YTRE YL+++ K+R IPD+ +++D I GF GETEE+ TL L++ V
Sbjct: 296 GSNKILKRMNRRYTREHYLEIIDKVRANIPDIAITTDIIVGFPGETEEDFLQTLDLVERV 355
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
+D AY F YS R T A + D V +EVK+ RL LIE + + + G V V
Sbjct: 356 RFDGAYTFMYSKRAGTPAA-SMPDQVDDEVKKDRLIRLIELQNKISLEKSAELKGKVVEV 414
Query: 499 LVEGPNKKAPD 509
L+EG +K+ P+
Sbjct: 415 LIEGVSKRDPN 425
>gi|423528366|ref|ZP_17504811.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus HuB1-1]
gi|402452029|gb|EJV83848.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus HuB1-1]
Length = 509
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAY------------------GKD 273
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F + K GL DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 274 FEDV----KYGL--GDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|407693030|ref|YP_006817819.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Actinobacillus
suis H91-0380]
gi|407389087|gb|AFU19580.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Actinobacillus
suis H91-0380]
Length = 475
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 249/450 (55%), Gaps = 42/450 (9%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + ++ + E+ + PE A+V+ +NTC+IR+ A+ KV+ +
Sbjct: 2 AKLHITTWGCQMNEYDSSKMADLLNSTHGLELTDKPEEADVLLLNTCSIREKAQEKVFSQ 61
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L W + WKK+ P I+ V GC+A + + I + VD+V GP
Sbjct: 62 LGR-W---KNWKKD---------KPELIIGVGGCVASQEGEHIRERAPFVDIVFGPQTLH 108
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ ++ G + I + E D P ++ TAFVS+M GCN CSFC+VP+
Sbjct: 109 RLPEMINKIRGGDRAIVDISFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCSFCVVPY 167
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y E F
Sbjct: 168 TRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYR-----------------GETF 210
Query: 316 NS-MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ +C ++ LR +D + R RYT+ HP +F D+++ + RD P + ++HL
Sbjct: 211 DGGICTFAEL-LRLVAAIDGID------RVRYTTSHPIEFTDDIIEVYRDTPELVSFLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G VL M+R +T Y +++K+R++ P++ +SSDFI GF GET E+ T+ +
Sbjct: 264 PIQSGADRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V +DM++ F YS R T A + DD+ EE K+ RL L + Q + +GT
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAA-DLPDDISEEEKKERLARLQQRINHQAMQFSRAMLGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q VLVEGP+KK EL G+++ V F
Sbjct: 383 EQRVLVEGPSKKDI-MELTGRTENNRIVNF 411
>gi|402556105|ref|YP_006597376.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cereus FRI-35]
gi|401797315|gb|AFQ11174.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cereus FRI-35]
Length = 509
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EEADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKALKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNNRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|378824637|ref|YP_005187369.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Sinorhizobium fredii HH103]
gi|365177689|emb|CCE94544.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Sinorhizobium fredii HH103]
Length = 466
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 248/465 (53%), Gaps = 49/465 (10%)
Query: 59 LAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVI 118
L P S V+ G E +++ +TYGCQMNV D + + + GY +V E+A+ +
Sbjct: 7 LLPKSPVA---GDEHVPARKVFVKTYGCQMNVYDSDRMSDALSRDGYV-ATDVLEDADFV 62
Query: 119 FINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKI 178
+NTC IR+ A KV+ L LK K + GR I V GC+A+ ++I
Sbjct: 63 LLNTCHIREKAAEKVYSELGRLRELK---KAKASEGREMV-----IGVAGCVAQAEGNEI 114
Query: 179 LDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADI-SPVRISKNS--VT 235
L VD+V GP Y LP L+ G++ + T ++E+ + + +P + S VT
Sbjct: 115 LRRAPAVDLVIGPQTYHRLPEALKRARSGERVVETDYAIEDKFEHLPAPDKAKTRSRGVT 174
Query: 236 AFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYND 295
AF++V GC+ C+FC+VP+TRG E SRPV IV E ++L + GV+E+TLLGQNVN+++
Sbjct: 175 AFLTVQEGCDKFCTFCVVPYTRGAEVSRPVAQIVTEAEKLVEGGVREITLLGQNVNAWHG 234
Query: 296 TSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFP 355
T G +W L DLL RL R RYT+ HP+D
Sbjct: 235 TG------PDGRDWGL-----------------GDLLRRLGEIAGLARLRYTTSHPRDMD 271
Query: 356 DELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSD 415
D L+ R + Y+HLP Q+G+ +L+ M R +T YL LV +IR + PD+ LS D
Sbjct: 272 DSLIEAHRSMAKLMPYLHLPVQSGSDRILKAMNRRHTAAEYLALVARIRAVQPDLALSGD 331
Query: 416 FICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRL-- 473
FI GF GETE++ +T+ L++AVGY A+ F YS R T + D VPE+VK +RL
Sbjct: 332 FIVGFPGETEKDFEETMRLVEAVGYAQAFSFKYSTRPGTPGA-DLKDQVPEDVKAKRLER 390
Query: 474 --TELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
+ L+ R+ C ++ +L+E P + +LVG+S
Sbjct: 391 LQSLLVNQQRDFAAACVGREID----LLLEKPGRMP--GQLVGRS 429
>gi|224542096|ref|ZP_03682635.1| hypothetical protein CATMIT_01271 [Catenibacterium mitsuokai DSM
15897]
gi|224525029|gb|EEF94134.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Catenibacterium mitsuokai
DSM 15897]
Length = 483
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 247/449 (55%), Gaps = 48/449 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
Y +TYGCQ N D E + I++ GY+ V + A+V+ +NTCAIR+ AE KV+ ++ Y
Sbjct: 47 YIQTYGCQANERDTETLSGILEMMGYTHTDEVKQ-ADVVLLNTCAIRENAEEKVFGKIGY 105
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIV--VLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
KN+ R P ++ V GCMA E + +KIL+ VD++ G
Sbjct: 106 L--------KNIKKTR------PNLIFGVCGCMAQEEVVVNKILEKFPQVDLIFGTHNIH 151
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP LL++ ++ + + S E + P N+ A+V++M GCN C++CIVP+
Sbjct: 152 RLPVLLKQAMLEKELVLEVWSKEGDVIENLPSH-RANNYKAWVNIMYGCNKFCTYCIVPY 210
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR +E I+KEV+EL G KE+TLLGQNVNSY K++ G +
Sbjct: 211 TRGKERSRELEEIIKEVEELKNSGYKEITLLGQNVNSYG------KDLNNGTD------- 257
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
FA LL+ ++ + R R+T+ HP DF +++ I+ N+ IHLP
Sbjct: 258 ------------FATLLEAVAKTGID-RIRFTTSHPWDFNADMIDIIAKYDNIMPSIHLP 304
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+GN VL+ M R Y++E+YL L I++ IPD +++D I GF ETEE+ DTL+L
Sbjct: 305 VQSGNDDVLQLMGRRYSKESYLKLFDMIKEKIPDCTVTTDIIVGFPNETEEQFQDTLSLY 364
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
YD+AY F YS RE T A + D+VP K++RL L E + + +G V
Sbjct: 365 NYCKYDLAYTFIYSPREGTPAAK-MEDNVPLSDKEQRLYRLNELVNKYANEANQKYLGQV 423
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK PD L G ++ + F
Sbjct: 424 VKVLVEGPSKKNPDV-LSGYTEHNKLINF 451
>gi|386811689|ref|ZP_10098914.1| RNA modification protein [planctomycete KSU-1]
gi|386403959|dbj|GAB61795.1| RNA modification protein [planctomycete KSU-1]
Length = 452
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 245/448 (54%), Gaps = 45/448 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
++ ET+GCQMN D E+ L +++ GY V NV E A+VI NTC++R +AE KV+ L
Sbjct: 17 VFFETFGCQMNKLDAELSLGLLQEEGYRIVDNVNE-ADVILFNTCSVRQHAEDKVYSHLG 75
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK+ +HP IV VLGCMA++ + I VD+VCG + L
Sbjct: 76 SLKTLKK-------------RHPDVIVGVLGCMAQKDGEAIFKRMPHVDLVCGTRMFSRL 122
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADIS-PVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L+ ++ G + L E+ ++ V N AFV+VMRGC+N CS+CIVP+
Sbjct: 123 PELILKIR--SHGSHVLAIDEDHIVNVKRAVTYRPNIHQAFVTVMRGCDNFCSYCIVPYV 180
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE SR + I +EV L G KE+TLLGQN+NSY G++ + G
Sbjct: 181 RGREVSRTITDIKEEVQALIANGCKEITLLGQNINSYG--KGLQGAITLG---------- 228
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
DLL L+ R ++ + HP D +++ + VC+++H+PA
Sbjct: 229 -------------DLLSELNDLGGLDRIKFVTSHPADMSRDIIRTISRLEKVCEHLHMPA 275
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+RMRRGYT Y +L+Q +++IP + ++SDFI GF GETE++ +T+ LM+
Sbjct: 276 QSGSDQILKRMRRGYTSTYYRELIQFAKELIPHLTVASDFIVGFPGETEKDFQETVKLME 335
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
+ + ++F YS R T A DDVP+E+K+ R L+E + + + +G
Sbjct: 336 DMRFQNCFIFKYSPRTGTKA-AELEDDVPDEIKRARNIRLLELQKCISLEENKKIIGKNV 394
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K P+ L G++ + H V F
Sbjct: 395 QVLVEGASKSDPN-RLSGRTKQNHIVVF 421
>gi|423385277|ref|ZP_17362533.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BAG1X1-2]
gi|401635333|gb|EJS53088.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus BAG1X1-2]
Length = 509
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAY------------------GKD 273
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F + K GL DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 274 FEDV----KYGL--GDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|317050742|ref|YP_004111858.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfurispirillum
indicum S5]
gi|316945826|gb|ADU65302.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Desulfurispirillum
indicum S5]
Length = 441
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 243/450 (54%), Gaps = 47/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R + +TYGCQMN D E + I+ GY V +V E A++ NTC++R+ AE KV+
Sbjct: 4 RAFIKTYGCQMNSGDSERIRGILVAHGYEMVSDVKE-ADLAIFNTCSVREKAEQKVF--- 59
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP--KIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
++ R Q + P +I + GC+ + ++ IL + ++D+V G +
Sbjct: 60 -----------SDIGRLRGQKERHPGFRIALCGCIPQVQREGILRKNPLIDIVFGVNNIS 108
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
L + E G++ E+ D+ R ++++ AFV++M GC+N CS+CIVP+
Sbjct: 109 GLMDFIAEAQQGKRTCRVEDEFFESEYDMPSQR--EDAMKAFVTIMNGCDNYCSYCIVPY 166
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR SI+ E+ +L +GV+EVTLLGQNVNSY W+ G
Sbjct: 167 TRGRERSRSAPSILAEIRQLVDDGVREVTLLGQNVNSYR--------------WQDKAG- 211
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ F LL L + PE+ R R+ + HPKDF + ++ M P VCKY+HL
Sbjct: 212 --------ALVDFPQLL-HLVHDIPELQRIRFVTSHPKDFSEAMMEAM-ALPRVCKYLHL 261
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G++ +L+ M RGYTRE YL + ++++ IP V LSSDF+ GF GETEE+ T+ +
Sbjct: 262 PIQAGSNRILKLMNRGYTREEYLAKIARLKERIPGVALSSDFLVGFPGETEEDFLQTMDI 321
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V Y + F YS+R T A D VP EV RL L A + + + + +GT
Sbjct: 322 LEQVEYKQIFGFNYSVRPETKAA-TMADQVPFEVMNERLNRLFAAQQSISHRLQQTYLGT 380
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K P L G++D V F
Sbjct: 381 TLGVLVEGASKNNP-AMLAGRTDFNTIVHF 409
>gi|187927511|ref|YP_001897998.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ralstonia
pickettii 12J]
gi|309779787|ref|ZP_07674542.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Ralstonia sp. 5_7_47FAA]
gi|404394487|ref|ZP_10986291.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Ralstonia
sp. 5_2_56FAA]
gi|229890622|sp|B2UFP3.1|MIAB_RALPJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|187724401|gb|ACD25566.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ralstonia pickettii 12J]
gi|308921364|gb|EFP67006.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Ralstonia sp. 5_7_47FAA]
gi|348616459|gb|EGY65959.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Ralstonia
sp. 5_2_56FAA]
Length = 456
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 242/454 (53%), Gaps = 51/454 (11%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMN D + + ++ A + PE+A+VI NTC++R+ A+ KV+ L
Sbjct: 3 KVFIKTYGCQMNEYDSDKMSDVLNAAEGLVPTDTPEDADVILFNTCSVREKAQEKVFSEL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK K ++ G V GC+A + I+ VDVV GP L
Sbjct: 63 GRVKALK-ALKPDLVVG-----------VGGCVASQEGASIVARAPYVDVVFGPQTLHRL 110
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L+ G+ ++ E + + P R+ + +A+VS+M GC+ CS+C+VP+T
Sbjct: 111 PDLIAARRRTGRSQVDVSFPEIEKFDHLPPARV--DGASAYVSIMEGCSKYCSYCVVPYT 168
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP + ++ EV L ++GV+EVTLLGQNVN+Y
Sbjct: 169 RGEEVSRPFDDVLAEVAGLAEQGVREVTLLGQNVNAY----------------------- 205
Query: 317 SMCKVKKMG-----LRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ KMG FA LL+ ++ E P + R RYT+ HPK+F L+ P +
Sbjct: 206 ----IGKMGDTSERADFALLLEYVA-EIPGIERIRYTTSHPKEFSSRLIEAYATNPKLVD 260
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
++HLP Q G+ +L M+RGYT Y ++K+R I P++ +++DFI GF GET+ + A
Sbjct: 261 HLHLPVQHGSDRILMAMKRGYTVLEYKSSIRKLRAIRPNISIATDFIVGFPGETDADFAK 320
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDS 490
T+ L+ +GYD ++ F YS R T A N DD P+ VK RL L E+ +
Sbjct: 321 TMDLIHEIGYDTSFSFIYSPRPGTPA-ANLHDDTPQAVKLERLKHLQATIEENVARISQG 379
Query: 491 QVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VG+VQ +LVEGP++K P TEL G+++ V F
Sbjct: 380 MVGSVQRILVEGPSRKDP-TELHGRTENNRVVNF 412
>gi|304316819|ref|YP_003851964.1| MiaB family RNA modification protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778321|gb|ADL68880.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 471
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/452 (35%), Positives = 254/452 (56%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ + ETYGCQMNV+D E + ++ GY+ N+ E+A+VI NTC +R++AE +++ R+
Sbjct: 34 KFHIETYGCQMNVHDSEKLAGMLTEMGYTHTDNL-EDADVILFNTCCVREHAEIRIFGRV 92
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK----MVDVVCGPDA 193
+ LK+ K N+ G + GCM + + ++++A K +D+V G
Sbjct: 93 SQLKELKQR-KPNIILG-----------ICGCMMQ--EKEVVEAIKNDYPYIDIVFGTHN 138
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
P LL+E I + ++ + P+R ++ + A+V+++ GCNN C++CIV
Sbjct: 139 LFKFPELLQESLNSDTTIIDIWDDNKSIVEDIPIRRAE-GLKAWVNIIYGCNNFCTYCIV 197
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY-NDTSGMEKEVEPGANWRLS 312
P+ RGRE+SR I+ E+ L EG KE+TLLGQNVNSY ND
Sbjct: 198 PYVRGREKSREPHDILNEIKSLANEGFKEITLLGQNVNSYGNDLP--------------- 242
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ + FADLL ++ R R+ + HPKD D+L++ MRD +C+++
Sbjct: 243 -----------IKIDFADLLYMINDIDGIERIRFMTSHPKDISDKLIFAMRDLDKLCEHL 291
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G++ +LERM R Y+RE YL+++ K+R IP + +++D I GF GET+++ DTL
Sbjct: 292 HLPVQSGSNKILERMNRKYSRERYLEIINKLRDNIPGIAITTDIIVGFPGETDKDFQDTL 351
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L+K V YD AY F YS R+ T A + + V E++K +RL ELI + + +
Sbjct: 352 DLVKEVRYDSAYTFIYSKRKGTPAEK-MSNQVDEDIKHKRLEELINLQNIISIEKNNEMK 410
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K+ + +L G++ V F
Sbjct: 411 GKVVEVLVEGTSKRDSE-KLTGRTRTNKIVHF 441
>gi|294782966|ref|ZP_06748292.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
1_1_41FAA]
gi|294481607|gb|EFG29382.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
1_1_41FAA]
Length = 435
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 244/450 (54%), Gaps = 58/450 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY +V ++A+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DVTEETDDADAVFLNTCTVREGAATQIFGKLGELKS 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK KK G V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE--KKGTIIG-----------VTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------SSHEVYTDNEDELPPRLDAEFASDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ +G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVNKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LL+ + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLEEICKVEGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L +M RGYT+E YL LV KI+ IPDV L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILRKMGRGYTKEKYLALVDKIKSKIPDVALTADIIVGFPGETEEDFLDTVDVVE 321
Query: 437 AVGYDMAYMFAYSMRERTHAHR--NYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
V +D +YMF YS+R+ T A N +D E VK+ RL L++ E +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAATMDNQID---ENVKKERLQRLMKVQNECSFNESSKYKDK 378
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEGP+KK + L G++ V F
Sbjct: 379 VVRVLVEGPSKKNKEV-LSGRTSTNKIVLF 407
>gi|340752143|ref|ZP_08688951.1| Dimethylallyladenosine tRNA methylthiotransferase miaB
[Fusobacterium sp. 2_1_31]
gi|422317110|ref|ZP_16398476.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Fusobacterium periodonticum D10]
gi|229421959|gb|EEO37006.1| Dimethylallyladenosine tRNA methylthiotransferase miaB
[Fusobacterium sp. 2_1_31]
gi|404590215|gb|EKA92673.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Fusobacterium periodonticum D10]
Length = 435
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 243/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY +V ++A+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DVTEETDDADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK KK G V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE--KKGTIIG-----------VTGCFAQEQGEELVRKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFASDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ +G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVNKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LL+ + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLEEICKVEGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S VL +M RGYT+E YL LV KI+ IPDV L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQVLRKMGRGYTKEKYLALVDKIKSKIPDVALTADIIVGFPGETEEDFLDTIDVVE 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL L+E + + +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIDENVKKERLQRLMEVQNKCSFNESSKYKDKIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK + L G++ V F
Sbjct: 381 RVLVEGPSKKNKEV-LSGRTSTNKIVLF 407
>gi|89902134|ref|YP_524605.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rhodoferax
ferrireducens T118]
gi|123091133|sp|Q21T29.1|MIAB_RHOFD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|89346871|gb|ABD71074.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodoferax ferrireducens
T118]
Length = 452
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 244/450 (54%), Gaps = 40/450 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNA-GYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ +TYGCQMN D + + ++ A GY NV E A++I NTC++R+ A+ KV+
Sbjct: 4 KVFIKTYGCQMNEYDSDKMSDVLGAAQGYEPTDNV-EEADLILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK KK G V GC+A + I++ VDVV GP
Sbjct: 63 LGRVKHLK---KKGALIG-----------VGGCVASQEGAAIIERAPYVDVVFGPQTLHR 108
Query: 197 LPRLLEEVD-YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP+LL E + + ++ E + + P R+ S AFVS+M GC+ CS+C+VP+
Sbjct: 109 LPQLLAERERLNRSQVDISFPEIEKFDHLPPARVEGAS--AFVSIMEGCSKYCSYCVVPY 166
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP E ++ EV L +GVKE+TLLGQNVN+ WR S
Sbjct: 167 TRGEEVSRPFEDVLVEVAGLADQGVKEITLLGQNVNA----------------WR-SRMI 209
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ + FA LL+ +S + P + R RY + HP +F L+ P + ++HL
Sbjct: 210 GAASALSSEMADFATLLEYVS-DIPGIERIRYVTSHPNEFTPSLIAAYDKLPKLVSHLHL 268
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT Y V+K+R I PD+ LSSDFI GF GETE++ + + L
Sbjct: 269 PVQHGSDRILMAMKRGYTAMEYKSTVRKLRAIRPDMALSSDFIVGFPGETEDDFSKMMKL 328
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D ++ F +S R T A N DD P EVK RRL L +S + +S++GT
Sbjct: 329 IDDVGFDNSFSFIFSPRPGTPAA-NLHDDTPHEVKLRRLQHLQTVINDSIKRISESRLGT 387
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VQ +LVEG +K+ TEL+G+++ V F
Sbjct: 388 VQRILVEGASKR-DSTELMGRTECNRVVNF 416
>gi|404497151|ref|YP_006721257.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter
metallireducens GS-15]
gi|418067896|ref|ZP_12705225.1| RNA modification enzyme, MiaB family [Geobacter metallireducens
RCH3]
gi|123756395|sp|Q39TA3.1|MIAB_GEOMG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|78194754|gb|ABB32521.1| tRNA (2-methylthio-N6-dimethylallyl-A37) methylthiotransferase
[Geobacter metallireducens GS-15]
gi|373557986|gb|EHP84356.1| RNA modification enzyme, MiaB family [Geobacter metallireducens
RCH3]
Length = 441
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 237/446 (53%), Gaps = 42/446 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y ET+GCQMNV+D E V S+++ GYS+ + E A++I +NTC++R AEHKV+ L
Sbjct: 7 LYIETFGCQMNVSDSEKVASLLRGEGYSQTPDSSE-ADLIIVNTCSVRAKAEHKVYSYLG 65
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
F LKR+ + + G GC+A++ +++L +D+V G LP
Sbjct: 66 RFRKLKRDRRLLLGVG-------------GCVAQQEGERLLKRVPWLDLVFGTHNLHLLP 112
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
++ + G++ E D+ P VT FV+VM+GC+N CS+CIVP+ RG
Sbjct: 113 EMVRAAEQGERRAAVDFIDNEARLDLFPQADEGGGVTRFVTVMQGCDNFCSYCIVPYVRG 172
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE SR I+ E+ GV+EVTLLGQNVNSY + PG
Sbjct: 173 REISRRSVEIIGEIRSAVAGGVREVTLLGQNVNSYGLKT-------PGE----------- 214
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
L FA LL +S R R+T+ HPKD EL+ + P +C +IHLPAQ
Sbjct: 215 -------LSFAGLLREISAIDGLERIRFTTSHPKDISPELIACFAELPKLCGHIHLPAQA 267
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G+ ++L RM RGYTR+ YL+ V +R P++ ++ D I GF GETE + TL+LM+ V
Sbjct: 268 GSDSILARMNRGYTRQEYLEKVAALRAARPEILITGDIIVGFPGETEADFLQTLSLMEEV 327
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
Y + FAYS R T A + D + + RL + R+ T + + VGT Q V
Sbjct: 328 RYTDIFSFAYSPRPETAAA-SLGDRIMRKETTERLERVQGLQRDMTIERHAGFVGTCQAV 386
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +K+ +L G++D V F
Sbjct: 387 LVEGMSKRG--DQLYGRTDGNLIVNF 410
>gi|386389045|ref|ZP_10073877.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus
paraphrohaemolyticus HK411]
gi|385696302|gb|EIG26800.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus
paraphrohaemolyticus HK411]
Length = 475
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 249/450 (55%), Gaps = 42/450 (9%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + ++ + E+ + PE A+V+ +NTC+IR+ A+ KV+ +
Sbjct: 2 AKLHITTWGCQMNEYDSSKMADLLNSTHGLELTDKPEEADVLLLNTCSIREKAQEKVFSQ 61
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L W + WKK+ P I+ V GC+A + + I + VD+V GP
Sbjct: 62 LGR-W---KNWKKD---------KPDLIIGVGGCVASQEGEHIRERAPFVDIVFGPQTLH 108
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ ++ G + I + E D P ++ TAFVS+M GCN CSFC+VP+
Sbjct: 109 RLPEMINKIRGGDRAIVDISFPEIEKFDRLPEPKAEGP-TAFVSIMEGCNKYCSFCVVPY 167
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y E F
Sbjct: 168 TRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYR-----------------GETF 210
Query: 316 NS-MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ +C ++ LR +D + R RYT+ HP +F D+++ + RD P + ++HL
Sbjct: 211 DGGICTFAEL-LRLVAAIDGID------RVRYTTSHPIEFTDDIIEVYRDTPELVSFLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G +L M+R +T Y +++K+R++ P++ +SSDFI GF GET E+ T+ +
Sbjct: 264 PIQSGADRILTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V +DM++ F YS R T A + DDV EE K+ RL L + Q + +GT
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAA-DIPDDVSEEEKKERLARLQQRINHQAMQFSRAMLGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LVEGP+KK EL G+++ V F
Sbjct: 383 EQRILVEGPSKKDI-MELTGRTETNRVVNF 411
>gi|373467594|ref|ZP_09558888.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus sp. oral
taxon 851 str. F0397]
gi|371758315|gb|EHO47088.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus sp. oral
taxon 851 str. F0397]
Length = 474
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 248/448 (55%), Gaps = 40/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + ++ + E+ +PE A+V+ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
W +E KKN +P ++ V GC+A + + I VD++ GP
Sbjct: 64 GR-W---KELKKN---------NPNLVIGVGGCVASQEGEHIRHRAPYVDIIFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP ++ ++ G+ + + E D P ++ TAFVS+M GCN C+FC+VP+T
Sbjct: 111 LPEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCTFCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y R
Sbjct: 170 RGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAY----------------RGPTHDG 213
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+C ++ LR +D + R R+T+ HP +F D+++ + RD P + ++HLP
Sbjct: 214 QICSFAEL-LRLVASIDGID------RLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPV 266
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G+ VL M+RG+T Y +++K+R + PD+ +SSDFI GF GET E+ T+ L+
Sbjct: 267 QAGSDRVLTMMKRGHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIA 326
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +DM++ F YS R T A + DDV E+ K++RL L E + Q +GT Q
Sbjct: 327 QVNFDMSFSFVYSARPGTPAA-DMPDDVTEDEKKQRLYVLQERINQQAAQFSRRMLGTEQ 385
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK EL G+++ V F
Sbjct: 386 RVLVEGPSKKDI-MELTGRTETNRIVNF 412
>gi|339499755|ref|YP_004697790.1| (dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Spirochaeta caldaria DSM 7334]
gi|338834104|gb|AEJ19282.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Spirochaeta caldaria DSM 7334]
Length = 442
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 245/446 (54%), Gaps = 46/446 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ETYGCQMN+ + + I+K G+ E + E A++I +NTC++R AE +V RL
Sbjct: 4 FFETYGCQMNIAESAALQMILKERGWKEASSA-ETADLILLNTCSVRATAEKRVMGRLAQ 62
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
+ KR K P ++V GCMAERL +K+ + VD V G + P
Sbjct: 63 YQADKR-------------KRPFTLIVAGCMAERLGEKLKEKIPAVDYVMGTQSRSVFPL 109
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
+L+ ++ G+ +L+ E+ S + + +F+ +M GCNN CS+CIVP+ RGR
Sbjct: 110 ILDAIEGGKP---LVLTDEKPAFSFSSSHLEEGQFRSFIPIMHGCNNFCSYCIVPYVRGR 166
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
E SR +SIV E++ L GV+E+TLLGQNVNSY +
Sbjct: 167 EISRDPQSIVDEINLLADRGVREITLLGQNVNSY------------------------LW 202
Query: 320 KVKKMGLRFADLLDRL--SLEFPEMRF-RYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K L F DLL+ + ++E +R+ R+ S HPKD + +M +++HL
Sbjct: 203 KQDSHSLDFPDLLELVATTVEKTPIRWVRFLSSHPKDLSSRAIEVMARHRVFARHLHLCV 262
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G+ +L M R YTR YL+LVQ+IR+ +PD+ LS+D + GF GETEE+ TL LM+
Sbjct: 263 QHGSDRILAAMNRRYTRSRYLELVQEIRRAMPDISLSTDILIGFPGETEEDLQATLNLME 322
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V + +YM+ Y+ RE T A+ + +PE VK+ RL +IE ++ T S+VG
Sbjct: 323 EVQFLYSYMYHYNPREGTAAY-ELPNRIPEPVKKERLARVIELQKQHTKAQLKSRVGQKT 381
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRV 522
+L+EG ++K D EL+G+++R V
Sbjct: 382 TILLEGISRKNAD-ELLGRTERDEMV 406
>gi|332140833|ref|YP_004426571.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii str. 'Deep ecotype']
gi|229890437|sp|B4S0R8.1|MIAB_ALTMD RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|327550855|gb|AEA97573.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii str. 'Deep ecotype']
Length = 477
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 161/447 (36%), Positives = 247/447 (55%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D E + ++ + E A+VI +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLYIKTWGCQMNEYDSEKMADLLDSTHGFSAAQSAEEADVILLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ LK Q K I V GC+A + D I VD+V GP L
Sbjct: 64 GRWKTLK------------QDKPELIIGVGGCVASQEGDTIRQRAPFVDLVFGPQTLHRL 111
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ E+ G K + + E D P ++ TAFVS+M GC+ C+FC+VP+TR
Sbjct: 112 PEMINELKGGAKSVIDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCSKYCTFCVVPYTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRPV+ ++ E+ +L +GV+EV LLGQNVN+Y G N+ +
Sbjct: 171 GEEVSRPVDDVLLEIAQLAGQGVREVNLLGQNVNAYR-----------GENYD-----GT 214
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+C RF++LL+ ++ R RYT+ HP +F D+++ P + ++HLP Q
Sbjct: 215 IC-------RFSELLELVAAIDGIDRIRYTTSHPVEFTDDIIDAYASIPELVDHLHLPVQ 267
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L M+RG+T Y ++K+++I P++ LSSDFI GF GET+ + T+ L++A
Sbjct: 268 SGSDRILNLMKRGHTALEYKSKMRKLKKIRPNISLSSDFIIGFPGETDADFEATMDLIQA 327
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V YD+++ F YS R T A + VDDV EE K++RL L + + + VGT Q
Sbjct: 328 VDYDLSFSFIYSARPGTPAA-DAVDDVTEETKKQRLHLLQQRITQQALRIARHMVGTEQR 386
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+LVEGP+KK P EL G+++ V F
Sbjct: 387 ILVEGPSKKNP-MELSGRTENNRVVNF 412
>gi|149202109|ref|ZP_01879082.1| tRNA-i(6)A37 modification enzyme MiaB [Roseovarius sp. TM1035]
gi|149144207|gb|EDM32238.1| tRNA-i(6)A37 modification enzyme MiaB [Roseovarius sp. TM1035]
Length = 440
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 238/445 (53%), Gaps = 41/445 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +TYGCQMNV D E + M +GY E + P A++I +NTC IR+ A KV+ L
Sbjct: 6 KLYIKTYGCQMNVYDSERMAEAMGGSGYVETQD-PAEADMILLNTCHIREKAAEKVYSEL 64
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK + K KI V GC+A+ ++I+ +VD+V GP +Y L
Sbjct: 65 GRMKQLKLD------------KPDLKIGVTGCVAQAEGEEIMRRQPLVDLVVGPQSYHRL 112
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P + V G+K ++T +E+ + + ++ TAF++V GC+ C+FC+VP+TR
Sbjct: 113 PEMEARVRAGEKALDTEFPIEDKFDTLRHRPKARRGPTAFLTVQEGCDKFCAFCVVPYTR 172
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRP +++E +L + GV+E+TLLGQNVN+Y+ G +W L+ +
Sbjct: 173 GAEVSRPASRVLEEARDLVERGVREITLLGQNVNAYHGAG-------EGGDWGLARLVWA 225
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ ++ D L+R+ R+T+ HP D D+L+ + + Y+HLP Q
Sbjct: 226 LSEI--------DGLERI---------RFTTSHPNDMDDDLIAAHGECAKLMPYLHLPVQ 268
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L+RM R +T E+YL L+++IR PD+ LS DFI GF ET+ + T+ L++A
Sbjct: 269 SGSDRILKRMNRSHTAESYLRLIERIRAARPDILLSGDFIVGFPEETDADFQATMELIEA 328
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y A+ F YS R T A VPEEVK RL L E D+ VG
Sbjct: 329 VNYGSAFSFKYSTRPGTPAAER--PQVPEEVKTERLYRLQELITRQQRAAQDAMVGRRVG 386
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRV 522
VL E + ++VGKSD H V
Sbjct: 387 VLFEKAGRMP--GQMVGKSDHLHAV 409
>gi|328545928|ref|YP_004306037.1| 2-methylthioadenine synthetase [Polymorphum gilvum SL003B-26A1]
gi|326415668|gb|ADZ72731.1| 2-methylthioadenine synthetase (MiaB-like) protein [Polymorphum
gilvum SL003B-26A1]
Length = 485
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 236/442 (53%), Gaps = 38/442 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ TYGCQMNV D + ++ GYS+ + E+A+++ +NTC IR+ A KV+ L
Sbjct: 24 KVFVRTYGCQMNVYDSGRMAEVLAPQGYSQTETL-EDADLVILNTCHIREKAAEKVYSEL 82
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K E R+++ P I V GC+A+ ++I +VD+V GP +Y L
Sbjct: 83 GRLRKIKDE--------RARAGKPTLIGVAGCVAQAEGEEISRRAPVVDLVFGPQSYHRL 134
Query: 198 PRLLEEVDYGQKGINTLLSLEETY---ADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL G K + T ++E + A+ S + +AF++V GC+ C+FC+VP
Sbjct: 135 PDLLVRAAGGAKVVETEFDIDEKFEHLAEQSKRMPLARAASAFLTVQEGCDKFCTFCVVP 194
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRP+ I++E + L GV+E+TLLGQNVN+++ E G W L
Sbjct: 195 YTRGAEVSRPLGQILQEAEGLAAAGVREITLLGQNVNAWH------GEGPDGRPWGLGRL 248
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ +V D LDRL RYT+ HP+D DEL+ RD P + Y+HL
Sbjct: 249 LRRLAEV--------DGLDRL---------RYTTSHPRDMDDELIAAHRDMPELMPYLHL 291
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L M R + R+ Y LV +IR+ P + LS DFI GF GET+ + ADT+ L
Sbjct: 292 PVQSGSDRILAAMNRKHGRDDYFRLVDRIREASPGLALSGDFIVGFPGETDADFADTMDL 351
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ VGY + F YS R T D +PE VK RL EL + S++G
Sbjct: 352 VRRVGYASCFSFKYSQRPGTPGA-AMADQLPEAVKSTRLAELQTLLSDQQRAFNASRLGI 410
Query: 495 VQLVLVEGPNKKAPDTELVGKS 516
VL+E ++A +L GKS
Sbjct: 411 TCDVLLEKKGRQA--GQLTGKS 430
>gi|226951972|ref|ZP_03822436.1| tRNA-i(6)A37 modification enzyme MiaB [Acinetobacter sp. ATCC
27244]
gi|294649236|ref|ZP_06726674.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter
haemolyticus ATCC 19194]
gi|226837310|gb|EEH69693.1| tRNA-i(6)A37 modification enzyme MiaB [Acinetobacter sp. ATCC
27244]
gi|292824903|gb|EFF83668.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter
haemolyticus ATCC 19194]
Length = 483
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 253/461 (54%), Gaps = 53/461 (11%)
Query: 75 SQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVW 134
S ++Y ET GCQMN D + ++ ++ + + P A+++ +NTC+IR+ A+ KV+
Sbjct: 29 SMKKLYIETQGCQMNEYDSHRMADLLGDSHGYVLTDNPNEADILLMNTCSIREKAQEKVF 88
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDA 193
L W+K + K+P ++ V GC+A + D I VD+V GP
Sbjct: 89 SGLG-------RWRK------LKEKNPDLVIGVGGCVASQEGDNIQKRAPYVDMVFGPQT 135
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISK---------NSVTAFVSVMRGC 244
LP++L D Q + + DIS I K AFVS+M GC
Sbjct: 136 LHRLPQML---DQHQAQVEKPKKEKIKLVDISFPDIEKFDFLPEPRVEGFKAFVSIMEGC 192
Query: 245 NNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVE 304
+ CSFC+VP+TRG E SRP++ ++ E+ L ++GV+E++LLGQNVN Y
Sbjct: 193 SKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAEKGVREISLLGQNVNGYR---------- 242
Query: 305 PGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMR 363
G + EG +C F +LL RL E P + R RYT+ HP +F DEL+ R
Sbjct: 243 -GETF---EG--GICT-------FPELL-RLVAEIPGIGRLRYTTSHPLEFSDELIQCYR 288
Query: 364 DRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGE 423
D P + ++HLP Q+G++ VL+ M+R +T + Y+D + K+R++ PD+ LSSDFI GF GE
Sbjct: 289 DLPQMVSHLHLPVQSGSNDVLQAMKRNHTIDVYIDKIAKLRKVRPDMHLSSDFIIGFPGE 348
Query: 424 TEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRES 483
T++ A+TL +K + +D +Y F YS R T A + DD PE+VK+ RL ++ E + S
Sbjct: 349 TDQHFAETLQFIKDLDFDHSYSFVYSKRPGTPA-SDLPDDTPEQVKKDRLAQVQEVIKRS 407
Query: 484 TGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ D+ +G ++ VL+E + K P+ L+G +D V F
Sbjct: 408 SIDKTDAMLGKIERVLIEKVSDKDPNI-LIGTADNTRLVTF 447
>gi|256844844|ref|ZP_05550302.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
3_1_36A2]
gi|294785875|ref|ZP_06751163.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_27]
gi|256718403|gb|EEU31958.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
3_1_36A2]
gi|294487589|gb|EFG34951.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_27]
Length = 435
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 242/448 (54%), Gaps = 54/448 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY +V +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DVTEEIDNADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVEGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L +M RGYT+E YL LV KI+ IP V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILRKMGRGYTKEKYLALVDKIKSKIPGVALTADIIVGFPGETEEDFLDTIDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +YMF YS+R+ T A + + E VK+ RL L+E + + + +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIEEAVKKERLQRLMEVQNKCSFEESSKYKDRIV 380
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +KK + L G++ V F
Sbjct: 381 KVLVEGSSKKNKEV-LSGRTSTNKVVLF 407
>gi|228922487|ref|ZP_04085789.1| hypothetical protein bthur0011_34740 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228940850|ref|ZP_04103410.1| hypothetical protein bthur0008_34910 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973771|ref|ZP_04134348.1| hypothetical protein bthur0003_35260 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980326|ref|ZP_04140637.1| hypothetical protein bthur0002_34950 [Bacillus thuringiensis Bt407]
gi|384187776|ref|YP_005573672.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676093|ref|YP_006928464.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Bacillus
thuringiensis Bt407]
gi|423581983|ref|ZP_17558094.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD014]
gi|423635455|ref|ZP_17611108.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD156]
gi|452200154|ref|YP_007480235.1| tRNA-i(6)A37 methylthiotransferase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228779431|gb|EEM27687.1| hypothetical protein bthur0002_34950 [Bacillus thuringiensis Bt407]
gi|228785923|gb|EEM33925.1| hypothetical protein bthur0003_35260 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228818864|gb|EEM64929.1| hypothetical protein bthur0008_34910 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228837201|gb|EEM82540.1| hypothetical protein bthur0011_34740 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|326941485|gb|AEA17381.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401212862|gb|EJR19603.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD014]
gi|401278206|gb|EJR84142.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD156]
gi|409175222|gb|AFV19527.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB [Bacillus
thuringiensis Bt407]
gi|452105547|gb|AGG02487.1| tRNA-i(6)A37 methylthiotransferase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 509
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 252/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|20807803|ref|NP_622974.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Thermoanaerobacter tengcongensis MB4]
gi|81481577|sp|Q8RA72.1|MIAB_THETN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|20516361|gb|AAM24578.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
MB4]
Length = 471
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 242/431 (56%), Gaps = 44/431 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMNV+D E + +++ GY ++ E A+V+ NTCA+R++AE +V R++
Sbjct: 36 ETYGCQMNVHDSEKLAGMLEEMGYKYTEDL-EKADVLLFNTCAVREHAEVRVLGRVSQIK 94
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMAE--RLKDKILDADKMVDVVCGPDAYRDLP 198
LK +++P I+ + GCM + + + I + VD+V G P
Sbjct: 95 ELK-------------NRNPNLIIGISGCMMQEKHIVEAIREKYPHVDIVFGTHNIYKFP 141
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
LL + + + ++ + + P+R N + A+V+++ GCNN C++CIVP+TRG
Sbjct: 142 ELLWQALNSRVQVIDVIENTQNVIEGLPIRRDSN-LKAWVNIIYGCNNFCTYCIVPYTRG 200
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE+SR E I+ EV EL ++G KE+TLLGQNVNSY G +
Sbjct: 201 REKSRRPEDIIAEVKELAEKGYKEITLLGQNVNSYGKDLGGD------------------ 242
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
+ FA LL L+ R R+ + HPKD DEL+Y MRD VC+++HLP Q
Sbjct: 243 -------INFAKLLYMLNDIKGIERIRFMTSHPKDISDELIYAMRDLDKVCEHLHLPVQA 295
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ +L+RM R YTRE YL+++ K+R IPD+ +++D I GF GETEE+ TL L++ V
Sbjct: 296 GSNKILKRMNRRYTREHYLEIIDKVRANIPDIAITTDIIVGFPGETEEDFFQTLDLVERV 355
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
+D AY F YS R T A + D V +EVK+ RL LIE + + + G V V
Sbjct: 356 RFDGAYTFMYSKRAGTPAA-SMPDQVDDEVKKDRLIRLIELQNKISLEKSAELKGKVVEV 414
Query: 499 LVEGPNKKAPD 509
L+EG +K+ P+
Sbjct: 415 LIEGVSKRDPN 425
>gi|406596313|ref|YP_006747443.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii ATCC 27126]
gi|407687202|ref|YP_006802375.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|407699609|ref|YP_006824396.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii str. 'Black Sea 11']
gi|406373634|gb|AFS36889.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii ATCC 27126]
gi|407248756|gb|AFT77941.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii str. 'Black Sea 11']
gi|407290582|gb|AFT94894.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 477
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 163/448 (36%), Positives = 251/448 (56%), Gaps = 40/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNA-GYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
++Y +T+GCQMN D E + ++ + GYS + E A+VI +NTC+IR+ A+ KV+ +
Sbjct: 4 KLYIKTWGCQMNEYDSEKMADLLDSTHGYSAAESA-EEADVILLNTCSIREKAQEKVFHQ 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L + LK Q K I V GC+A + D I VD+V GP
Sbjct: 63 LGRWKTLK------------QDKPELIIGVGGCVASQEGDTIRQRAPFVDLVFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP ++ ++ G K + + E D P ++ TAFVS+M GC+ C+FC+VP+T
Sbjct: 111 LPEMINQLQGGAKSVIDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCSKYCTFCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRPV+ ++ E+ +L +GV+EV LLGQNVN+Y G N+
Sbjct: 170 RGEEVSRPVDDVLLEIAQLAGQGVREVNLLGQNVNAYR-----------GENYD-----G 213
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
++C RF++LL+ ++ R RYT+ HP +F D+++ P + ++HLP
Sbjct: 214 TIC-------RFSELLELVAAIDGIDRIRYTTSHPVEFTDDIIEAYASIPELVDHLHLPV 266
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L M+RG+T Y ++K+++I P++ LSSDFI GF GET+ + T+ L++
Sbjct: 267 QSGSDRILNLMKRGHTAIEYKSKMRKLKKIRPNISLSSDFIIGFPGETDADFEATMDLIQ 326
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
AV YD+++ F YS R T A + VDDV EE K++RL L + + + VGT Q
Sbjct: 327 AVDYDLSFSFIYSARPGTPAA-DAVDDVSEETKKQRLHLLQQRITQQALRIARHMVGTEQ 385
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+LVEGP+KK P EL G+++ V F
Sbjct: 386 RILVEGPSKKNP-MELSGRTENNRVVNF 412
>gi|218510260|ref|ZP_03508138.1| putative 2-methylthioadenine synthetase (miaB-like) protein
[Rhizobium etli Brasil 5]
Length = 450
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 248/471 (52%), Gaps = 48/471 (10%)
Query: 40 GLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSI 99
G +H+IA ++T L AP + + S +++ +TYGCQMNV D +
Sbjct: 6 GKNHYIA--AMTQDSALLQ-APEPMLRDGSNSR-----KVFIKTYGCQMNVYDSTRMSDA 57
Query: 100 MKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSK 159
+ GY ++ E A+++ +NTC IR+ A KV+ L +K KK A GR
Sbjct: 58 LARDGYEPTEDM-EEADLVLLNTCHIREKAAEKVYSALGRLREMK---KKKAADGREM-- 111
Query: 160 HPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEE 219
I V GC+A+ ++IL VDVV GP Y LP L GQ+ ++T ++E+
Sbjct: 112 ---MIGVTGCVAQAEGEEILRRAPAVDVVIGPQTYHRLPEALRRAQQGQRVVDTEYAIED 168
Query: 220 TYADISPV----RISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDEL 275
+ + P+ +I VTAF++V GC+ C+FC+VP+TRG E SRPV IV+E ++L
Sbjct: 169 KFEHL-PIAESRKIRARGVTAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAEKL 227
Query: 276 WKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL 335
+ GV+E+TLLGQNVN+++ G W L DLL RL
Sbjct: 228 VEAGVREITLLGQNVNAWHGAGPR------GEAWSL-----------------GDLLYRL 264
Query: 336 SLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTRE 394
+ E P + R RYT+ HP+D D L+ RD + Y+HLP Q+G+ +L+ M R +T
Sbjct: 265 A-EIPGLARLRYTTSHPRDMDDRLIEAHRDLRALMPYLHLPVQSGSDRILKAMNRRHTAA 323
Query: 395 AYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERT 454
Y L+++IR + PD+ LS DFI GF GET+ + DTL L++ V Y A+ F YS R T
Sbjct: 324 EYFSLIERIRTVRPDIALSGDFITGFPGETDADFEDTLRLVEEVRYAQAFSFKYSTRPGT 383
Query: 455 HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNK 505
D VPEE+K RL L + + +S +G +L+E P +
Sbjct: 384 PGA-ELKDQVPEEIKAERLERLQALLLKQQQEFAESCIGKEIDLLLEKPGR 433
>gi|226312967|ref|YP_002772861.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Brevibacillus
brevis NBRC 100599]
gi|226095915|dbj|BAH44357.1| probable tRNA methylthiotransferase [Brevibacillus brevis NBRC
100599]
Length = 503
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 254/451 (56%), Gaps = 47/451 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R + TYGCQMN +D E + I++ GY+ +V E+A+VI NTCAIR+ AE KV+ L
Sbjct: 63 RYHVRTYGCQMNEHDSETISGILQAMGYTSSDSV-EDADVILFNTCAIRENAEDKVFGEL 121
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LK + +P I+ V GCM+ E++ KIL + + VD++ G
Sbjct: 122 GHMKRLK-------------NNNPNLILGVCGCMSQEEKVVKKILKSYQQVDLIFGTHNI 168
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP LL + + ++ + + S E + P ++ + + +V++M GC+ C++CIVP
Sbjct: 169 HRLPELLRDAMFSKEMVIEVWSKEGDIVENMP-KLREGNTKGWVNIMYGCDKFCTYCIVP 227
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E ++ EV +L ++G KE+ LLGQNVN+Y +
Sbjct: 228 YTRGKERSRRPEDVIAEVRDLARQGFKEIMLLGQNVNAY------------------GKD 269
Query: 315 FNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
F + K G F DL+D + ++ P R R+T+ HP+DF D L+ ++ N+ + IH
Sbjct: 270 FEDI----KYG--FGDLMDEIRKIDIP--RVRFTTSHPRDFDDHLIEVLAKGGNLVEQIH 321
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G++ VL+RM R Y+RE YL+LV+KI+ IP+V LS+D I GF GET+E+ DT++
Sbjct: 322 LPVQSGSTEVLKRMARKYSREHYLELVRKIKDAIPNVSLSTDIIVGFPGETDEQFEDTIS 381
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V YD AY F YS RE T A D+VP EVK+ RL L E +
Sbjct: 382 MVEEVKYDFAYTFIYSPREGTPAAV-MEDNVPMEVKKARLYRLNEVLAGIALEQNKKLQD 440
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG ++ + L G++ V F
Sbjct: 441 QVVEVLVEGESRTNAEV-LAGRTRTNKLVHF 470
>gi|229071269|ref|ZP_04204493.1| hypothetical protein bcere0025_34430 [Bacillus cereus F65185]
gi|229081024|ref|ZP_04213537.1| hypothetical protein bcere0023_36650 [Bacillus cereus Rock4-2]
gi|228702338|gb|EEL54811.1| hypothetical protein bcere0023_36650 [Bacillus cereus Rock4-2]
gi|228711890|gb|EEL63841.1| hypothetical protein bcere0025_34430 [Bacillus cereus F65185]
Length = 509
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPDV L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDVVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP +VK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMQVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|167037585|ref|YP_001665163.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116000|ref|YP_004186159.1| MiaB family RNA modification protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|326389400|ref|ZP_08210967.1| RNA modification enzyme, MiaB family [Thermoanaerobacter
ethanolicus JW 200]
gi|392940990|ref|ZP_10306634.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Thermoanaerobacter siderophilus SR4]
gi|229891015|sp|B0K9L4.1|MIAB_THEP3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|166856419|gb|ABY94827.1| RNA modification enzyme, MiaB family [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929091|gb|ADV79776.1| RNA modification enzyme, MiaB family [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|325994405|gb|EGD52830.1| RNA modification enzyme, MiaB family [Thermoanaerobacter
ethanolicus JW 200]
gi|392292740|gb|EIW01184.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Thermoanaerobacter siderophilus SR4]
Length = 471
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 161/429 (37%), Positives = 246/429 (57%), Gaps = 46/429 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMNV+D E + +++ GY N+ E A+V+ NTCA+R++AE +V R++
Sbjct: 36 ETYGCQMNVHDSEKLAGMLEKMGYKYTENL-EQADVLLFNTCAVREHAEIRVLGRVSQMK 94
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRDLP 198
LK +++P I+ V GCM + + + I + +D+V G P
Sbjct: 95 ELK-------------ARNPNLIIGVSGCMMQEKNVVEAIKEKYSYIDIVFGTHNIYKFP 141
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LL E Q + ++ + + PV+ N + A+V+++ GCNN C++CIVP+TRG
Sbjct: 142 QLLWEALNSQDIVIDIIEDTKNVIEELPVKRDSN-LKAWVNIIYGCNNFCTYCIVPYTRG 200
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE+SR E I+ EV EL ++G KE+TLLGQNVNSY K+++
Sbjct: 201 REKSRKPEDIIAEVKELAQKGYKEITLLGQNVNSYG------KDLDED------------ 242
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ FA LL +L+ +E E R R+ + HPKD DEL+Y +RD VC+++HLP Q
Sbjct: 243 -------ITFAKLLYKLNDIEGIE-RIRFMTSHPKDISDELIYAIRDLDKVCEHLHLPVQ 294
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
G++ +L++M R YT+E YL+++ K+R IPD+ +++D I GF GETEE+ +TL L++
Sbjct: 295 AGSNKILKKMNRKYTKEHYLEIIDKVRSNIPDIAITTDIIVGFPGETEEDFLETLDLVER 354
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D AY F YS R T A N D V + VK RL LIE + + + G +
Sbjct: 355 VRFDAAYTFIYSKRAGTVA-ANMPDQVDDAVKHERLERLIELQNKISLEKSAELRGKIVE 413
Query: 498 VLVEGPNKK 506
VL+EG +K+
Sbjct: 414 VLIEGISKR 422
>gi|334137185|ref|ZP_08510629.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp. HGF7]
gi|333605269|gb|EGL16639.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus sp. HGF7]
Length = 494
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 238/410 (58%), Gaps = 46/410 (11%)
Query: 75 SQGRIYQ-ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
QG+ Y TYGCQMN +D E + +++ GY+ E A+VI +NTCAIR+ AE KV
Sbjct: 48 GQGKRYMIRTYGCQMNEHDTETMKGMLEELGYTSTEEKQE-ADVILLNTCAIRENAEDKV 106
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGP 191
+ L + LK E K N+ G V GCM+ E + +IL VD++ G
Sbjct: 107 FGELGHLKHLKLE-KPNLVLG-----------VCGCMSQEEGVVKRILQKHGHVDLIFGT 154
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
LP LL++ ++ + + S E + P + + + A+V++M GC+ C++C
Sbjct: 155 HNIHRLPALLQDAYLSKEMVVEVWSKEGDIIENLPKK--REGMRAWVNIMYGCDKFCTYC 212
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVP+TRG+ERSR E ++ EV +L ++G KE+TLLGQNVN+Y G ++
Sbjct: 213 IVPYTRGKERSRRPEDVLAEVRDLARQGFKEITLLGQNVNAY------------GKDF-- 258
Query: 312 SEGFNSMCKVKKMGLRFADLL-DRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+ + F DL+ D ++ P R R+T+ HP+DF D L+ ++ + N+ +
Sbjct: 259 ----------EDISYSFGDLMADMRKIDVP--RIRFTTSHPRDFDDHLVEVLAHKGNLME 306
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+G++ VL+RM R Y+RE YLDLV+KI+ IPDV LS+D I GF GET+E+ +
Sbjct: 307 HIHLPVQSGSTEVLKRMSRKYSRELYLDLVRKIKTAIPDVVLSTDIIVGFPGETDEQFEE 366
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
TL+L+K V +D AY F YS RE T A D+VPE+VK+ RL L E
Sbjct: 367 TLSLVKEVRFDFAYSFIYSPREGTPA-AAMEDNVPEDVKKERLYRLNEVL 415
>gi|414160614|ref|ZP_11416880.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus simulans ACS-120-V-Sch1]
gi|410878134|gb|EKS26023.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Staphylococcus simulans ACS-120-V-Sch1]
Length = 513
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 259/457 (56%), Gaps = 52/457 (11%)
Query: 75 SQGR-IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+GR + +TYGCQMN +D E++ I + GY+ ++ + A+VI +NTCAIR+ AE+KV
Sbjct: 64 GKGRTFFIKTYGCQMNAHDTEVMAGIFEALGYTLADDMLK-ADVILLNTCAIRENAENKV 122
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCG 190
+ + LKR+ P ++ V GCM+ E + +KIL + + VD++ G
Sbjct: 123 FSEIGNLKHLKRD-------------RPDCLIGVCGCMSQEESVVNKILKSFQNVDMIFG 169
Query: 191 PDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSF 250
LP +LEE + + + S E + P ++ + A+V++M GC+ C++
Sbjct: 170 THNIHKLPEILEEAYLSKAMVIDVWSKEGDVIENLP-KVRDDYFKAWVNIMYGCDKFCTY 228
Query: 251 CIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR 310
CIVPFTRG+ERSR E I++EV +L ++G KE+TLLGQNVNSY +++E G
Sbjct: 229 CIVPFTRGKERSRRPEDIIEEVRDLARQGYKEITLLGQNVNSYGKDL---QDIEYG---- 281
Query: 311 LSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCK 370
+G F D+ ++ P R R+T+ HP DF D ++ ++ N+
Sbjct: 282 -------------LGDLFEDIA---KIDIP--RVRFTTSHPWDFTDHMIEVIAKGGNIVP 323
Query: 371 YIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHAD 430
+IHLP Q+GN AVL+ M R YTRE+YLDLV +I+ IPDV L++D I G+ ETEE+ +
Sbjct: 324 HIHLPVQSGNDAVLKIMGRKYTRESYLDLVNRIKAAIPDVALTTDIIVGYPNETEEQFEE 383
Query: 431 TLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL---IEAFRESTGQC 487
TL+L V ++ AY + YS R+ T A R D+V EVK+ RL L + + E +
Sbjct: 384 TLSLYDEVEFEHAYTYLYSQRDGTPAAR-MKDNVATEVKKERLQRLNKKVGYYSERALKA 442
Query: 488 YDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Y+ +V T VL EG +KK + L G +++ V F
Sbjct: 443 YEGEVVT---VLCEGSSKKDENV-LAGYTEKNKLVNF 475
>gi|392374449|ref|YP_003206282.1| hypothetical protein DAMO_1387 [Candidatus Methylomirabilis
oxyfera]
gi|258592142|emb|CBE68447.1| conserved protein of unknown function [Candidatus Methylomirabilis
oxyfera]
Length = 438
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 160/443 (36%), Positives = 242/443 (54%), Gaps = 43/443 (9%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQ N D E + ++ N GY+ + E A++I +NTCAIR+ AEHKV+ RL F
Sbjct: 8 TFGCQANDLDSERITGLLHNEGYT-LTECEEEADLILLNTCAIREKAEHKVYSRLGSFQV 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LKRE + KI + GC+A++ +L+ +D V GP +P LL+
Sbjct: 67 LKRE------------RAGLKIGICGCVAQQEGQVLLNRFPYLDFVVGPAQLTAIPSLLQ 114
Query: 203 EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERS 262
+ + T + +Y +PV+ N + A+VS+M GC++ C+FC+VPFTRGRERS
Sbjct: 115 --TGATRSVVTTRAPGYSYPVDAPVQRQSN-IRAWVSIMEGCDHFCTFCVVPFTRGRERS 171
Query: 263 RPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVK 322
RP + IV+E+ L ++G +EVTLLGQ VNSY +++ P
Sbjct: 172 RPPQEIVEEIRGLKRQGYREVTLLGQTVNSYG------RKLTPP---------------- 209
Query: 323 KMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNS 381
+ F +LL ++ L +MR R+TSPHP D DEL + P++C+ IHLP Q+G+
Sbjct: 210 ---ISFVELLRQIDQLVDSQMRVRFTSPHPLDVTDELAAAIAALPSLCEQIHLPVQSGSD 266
Query: 382 AVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYD 441
+L +M+RG+TR+ YL + +R P++ +++D I GF GETEE+ TL LM+ VG+D
Sbjct: 267 RILYQMKRGHTRDEYLKKIALLRARTPEIAITTDVIVGFPGETEEDFQATLDLMQEVGFD 326
Query: 442 MAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVE 501
A+MF YS R T A R D + EE K R L + + + + + +G VLV
Sbjct: 327 GAFMFKYSPRPHTEAER-MPDQLSEEAKGRWLEQALALMNRLSLERNRAYLGRTVEVLVN 385
Query: 502 GPNKKAPDTELVGKSDRGHRVAF 524
+ K G++ + V F
Sbjct: 386 REDAKGNTDRHTGRTRQNKIVHF 408
>gi|49475038|ref|YP_033079.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bartonella
henselae str. Houston-1]
gi|81648272|sp|Q6G4V6.1|MIAB_BARHE RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|49237843|emb|CAF27038.1| hypothetical protein BH02260 [Bartonella henselae str. Houston-1]
Length = 458
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 239/444 (53%), Gaps = 43/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + + + GY P +A++I +NTC IR+ A K++ L
Sbjct: 16 KVFIKTYGCQMNVYDSQRMTDSLSSKGYV-ATQTPNDADLILVNTCHIREKAAEKLYSDL 74
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+++E R+ K P + V GC+A+ +IL +VD+V GP Y L
Sbjct: 75 GRLRVMRQE--------RTPDK-PLMVGVTGCVAQAEGSEILRRAPIVDLVIGPQMYHRL 125
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVR---ISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LLE+ G+K + T ++E+ +A + P + K V+AF++V GC+ C+FC+VP
Sbjct: 126 PDLLEQTKQGKKIVATEYAVEDKFAHLPPHNKRAVRKRGVSAFLTVQEGCDKFCTFCVVP 185
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SR VE I +E +L + GVKE+TLLGQNVN ++ + G WRL +
Sbjct: 186 YTRGAEISRSVEQITEEARQLIEAGVKEITLLGQNVNGWHGQN------VNGKTWRLGDL 239
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K+ GL+ R RYT+ HP+D D L+ RD + Y+HL
Sbjct: 240 LYHLAKLD--GLK---------------RLRYTTSHPRDMDDSLIAAHRDLDILMPYLHL 282
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L+ M R + YL L++KIR PD+ S DFI GF GET+E+ +T+ L
Sbjct: 283 PVQSGSDRILKAMNRQHKSIHYLQLIEKIRNARPDIAFSGDFIVGFPGETDEDFEETIKL 342
Query: 435 MKAVGYDMAYMFAYSMRERT--HAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
+K V Y AY F YS R T +N+V+ E VK RL L E S++
Sbjct: 343 IKQVEYSSAYSFKYSPRPGTVGATMKNHVE---EAVKDARLQHLQVLLLEQQNAFLRSKI 399
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G VL+E + + ++VG+S
Sbjct: 400 GQTTDVLIEKAGRHS--GQMVGRS 421
>gi|337286300|ref|YP_004625773.1| MiaB family RNA modification protein [Thermodesulfatator indicus
DSM 15286]
gi|335359128|gb|AEH44809.1| RNA modification enzyme, MiaB family [Thermodesulfatator indicus
DSM 15286]
Length = 443
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 252/448 (56%), Gaps = 42/448 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R++ T+GCQMN D E + +++K+ Y+ + P+ A++I +NTC++R AE KV+ +
Sbjct: 3 RVFIRTFGCQMNEYDSERMYALIKDE-YT-LCQEPKEADLILVNTCSVRKKAEEKVYGLV 60
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK++ + ++ G V GC+A++ +KIL VD+V GP A L
Sbjct: 61 GRLKHLKKQ-RPDLIIG-----------VCGCVAQQEGEKILKRLPHVDMVLGPQAVYRL 108
Query: 198 PRLLEEVDYGQKG-INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P LE+V GQ I+T + I P V AFV++M+GC+N C++C+VP+T
Sbjct: 109 PEALEKVKKGQGPVIDTEFKPDFHQPLIFPHLNGTRPVKAFVTIMQGCDNFCAYCVVPYT 168
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE SRP E I+ E++ L K+GV+EV LLGQNVNSY R +GF
Sbjct: 169 RGREISRPPEEILAEIECLVKQGVREVMLLGQNVNSYG---------------RKEKGFP 213
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
S FA LL ++ R R+T+ HPKD EL+ + D P VC+++HLP
Sbjct: 214 S----------FAKLLREVAQIKGLWRIRFTTSHPKDLDHELMEAIADIPQVCEHLHLPV 263
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G++ VL+RM R YTRE YL V+++R++ ++ L++D I GF GE+ E+ +TL+L+K
Sbjct: 264 QAGSNRVLKRMNRKYTREEYLAKVEQLRKLCLEICLTTDIIVGFPGESPEDFEETLSLLK 323
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y + F YS R A + D VPEE K RRL ++ + + T + +S +G
Sbjct: 324 EVRYAEIFSFKYSDRPLARA-TQFEDKVPEEEKARRLAKVHKLQEKITREINESFIGREV 382
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG + + +T G++ H V F
Sbjct: 383 EVLVEGKS-HSNETLWTGRTRSNHVVNF 409
>gi|229092810|ref|ZP_04223948.1| hypothetical protein bcere0021_35610 [Bacillus cereus Rock3-42]
gi|228690608|gb|EEL44389.1| hypothetical protein bcere0021_35610 [Bacillus cereus Rock3-42]
Length = 457
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 248/432 (57%), Gaps = 44/432 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKALKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + D G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNDRYKGQ 445
Query: 495 VQLVLVEGPNKK 506
+ VLV+G +KK
Sbjct: 446 IVEVLVDGESKK 457
>gi|410861153|ref|YP_006976387.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii AltDE1]
gi|410818415|gb|AFV85032.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alteromonas
macleodii AltDE1]
Length = 477
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 247/447 (55%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D E + ++ + E A+VI +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLYIKTWGCQMNEYDSEKMADLLDSTHGFSAAQSAEEADVILLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ LK Q K I V GC+A + D I VD+V GP L
Sbjct: 64 GRWKTLK------------QDKPELIIGVGGCVASQEGDTIRQRAPFVDLVFGPQTLHRL 111
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ E+ G K + + E D P ++ TAFVS+M GC+ C+FC+VP+TR
Sbjct: 112 PEMINELKGGAKSVIDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCSKYCTFCVVPYTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRPV+ ++ E+ +L +GV+EV LLGQNVN+Y G N+ +
Sbjct: 171 GEEVSRPVDDVLLEIAQLAGQGVREVNLLGQNVNAYR-----------GENYD-----GT 214
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+C RF++LL+ ++ R RYT+ HP +F D+++ P + ++HLP Q
Sbjct: 215 IC-------RFSELLELVAAIDGIDRIRYTTSHPVEFTDDIIDAYASIPELVDHLHLPVQ 267
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L M+RG+T Y ++K+++I P++ LSSDFI GF GET+ + T+ L++A
Sbjct: 268 SGSDRILNLMKRGHTALEYKSKMRKLKKIRPNISLSSDFIIGFPGETDADFEATMDLIQA 327
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V YD+++ F YS R T A + +DDV EE K++RL L + + + VGT Q
Sbjct: 328 VDYDLSFSFIYSARPGTPAA-DAIDDVTEETKKQRLHLLQQRITQQALRIARHMVGTEQR 386
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+LVEGP+KK P EL G+++ V F
Sbjct: 387 ILVEGPSKKNP-MELSGRTENNRVVNF 412
>gi|167561620|ref|ZP_02354536.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia oklahomensis
EO147]
gi|167568856|ref|ZP_02361730.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia oklahomensis
C6786]
Length = 457
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 158/449 (35%), Positives = 249/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ + E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNASEGLEKTDSPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K ++ G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPDLLIG-----------VGGCVASQEGASIVARAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRASGRAQVDITFPEIEKFDHLPPARVEGPS--AFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ E+ L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGAS 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F LL + P + ++HLP
Sbjct: 216 DIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I P++ LS+D I GF GETE + T+ L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETEADFDKTMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P E+K +RL L E+ + S VG V
Sbjct: 328 HEMSYDTSFSFIYSPRPGTPA-ANLADDTPRELKLKRLQHLQATIEENVVRISRSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|452974392|gb|EME74212.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
sonorensis L12]
Length = 509
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 246/451 (54%), Gaps = 47/451 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + E+A VI +NTCAIR+ AE+KV+ +
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDSTEDANVILLNTCAIRENAENKVFGEI 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LK +P I+ V GCM+ E + ++IL VD++ G
Sbjct: 126 GHLKALK-------------MNNPDVILGVCGCMSQEESVVNRILKKHPFVDLIFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP LL E ++ + + S E + P ++ + +V++M GC+ C++CIVP
Sbjct: 173 HRLPELLSEAYLSKEMVVEVWSKEGDVIENLP-KVRHGKIKGWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++EV L EG KE+TLLGQNVN+Y +
Sbjct: 232 YTRGKERSRRPEDIIQEVRRLAAEGYKEITLLGQNVNAY------------------GKD 273
Query: 315 FNSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
F M + GL L+D L ++ P R R+T+ HP+DF D L+ ++ N+ +IH
Sbjct: 274 FEDM----EYGL--GHLMDELHKIDIP--RIRFTTSHPRDFDDHLIEVLAKGGNLLDHIH 325
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G+S VL+ M R Y RE YL+LV KI++ +P+ L++D I GF ETEE+ +TL+
Sbjct: 326 LPVQSGSSEVLKLMARKYDRERYLELVGKIKKAMPNASLTTDIIVGFPNETEEQFEETLS 385
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L + V +D AY F YS RE T A + D+VP VK+ RL L + E + + G
Sbjct: 386 LYREVEFDSAYTFIYSPREGTPAAK-MRDNVPMRVKKERLQRLNDLVNEISAKKMKEYEG 444
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K PD L G + + V F
Sbjct: 445 QVVEVLVEGESKNNPDI-LAGYTRKNKLVNF 474
>gi|423649637|ref|ZP_17625207.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD169]
gi|401282917|gb|EJR88814.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD169]
Length = 509
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 252/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|229151973|ref|ZP_04280169.1| hypothetical protein bcere0011_35140 [Bacillus cereus m1550]
gi|228631528|gb|EEK88161.1| hypothetical protein bcere0011_35140 [Bacillus cereus m1550]
Length = 509
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 252/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|188582640|ref|YP_001926085.1| (dimethylallyl)adenosine tRNA methylthiotransferase
[Methylobacterium populi BJ001]
gi|229890615|sp|B1ZJR5.1|MIAB_METPB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|179346138|gb|ACB81550.1| RNA modification enzyme, MiaB family [Methylobacterium populi
BJ001]
Length = 446
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 158/424 (37%), Positives = 229/424 (54%), Gaps = 36/424 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y ++YGCQMN D + ++ GYS +V E A+V+ +NTC IR+ A KV+ L
Sbjct: 3 KAYVKSYGCQMNAYDAGRMADVLAAEGYSATESV-EEADVVVLNTCHIREKAAEKVYSEL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E R++S +IVV GC+A+ +IL VDVV GP +Y L
Sbjct: 62 GRLRVLKGE--------RAESGQDTRIVVAGCVAQAEGREILSRAPAVDVVVGPQSYHRL 113
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL + + ++T +E+ + D P R ++ VT F++V GC+ C+FC+VP+TR
Sbjct: 114 PDLLRQ-SRETRVVDTEFPVEDKF-DHLPARRNRG-VTGFLTVQEGCDKFCAFCVVPYTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SR V ++V+E L + GV+E+TL+GQNVN+Y+ GA L
Sbjct: 171 GAEVSRSVAAVVEEARRLVEGGVREITLIGQNVNAYHGDG------PDGAPATLGH---- 220
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
L+D LS +R RYT+ HP DF D+L+ P V Y+HLP Q
Sbjct: 221 -------------LMDALSAVPGLLRLRYTTSHPNDFADDLIAAHAGNPLVMPYLHLPVQ 267
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +L M R +T +AY L+++IR PD+ LSSDFI GF GE++ + A+T+ L+
Sbjct: 268 SGSDRILHAMNRRHTGDAYRRLIERIRTARPDIALSSDFIVGFPGESDADFAETMRLVAE 327
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
+G+ A+ F YS R T A D VPE VK RL L + + + VGTV
Sbjct: 328 IGFAAAFSFKYSPRAGTPAAERE-DAVPEAVKTERLAALQQLLDQQRHAFNAAAVGTVAE 386
Query: 498 VLVE 501
+LVE
Sbjct: 387 ILVE 390
>gi|433654962|ref|YP_007298670.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433293151|gb|AGB18973.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 471
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 160/452 (35%), Positives = 253/452 (55%), Gaps = 49/452 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ + ETYGCQMNV+D E + ++ GY+ N+ E+A+VI NTC +R++AE +++ R+
Sbjct: 34 KFHIETYGCQMNVHDSEKLAGMLTEMGYTHTDNL-EDADVILFNTCCVREHAEIRIFGRV 92
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK----MVDVVCGPDA 193
+ LK+ K N+ G + GCM + + ++++A K +D+V G
Sbjct: 93 SQLKELKQR-KPNIILG-----------ICGCMMQ--EKEVVEAIKNDYPYIDIVFGTHN 138
Query: 194 YRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
P LL+E I + ++ + P+R ++ + A+V+++ GCNN C++CIV
Sbjct: 139 LFKFPELLQESLNSDTTIIDIWDDNKSIVEDIPIRRAE-GLKAWVNIIYGCNNFCTYCIV 197
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSY-NDTSGMEKEVEPGANWRLS 312
P+ RGRE+SR I+ E+ L EG KE+TLLGQNVNSY ND
Sbjct: 198 PYVRGREKSREPHDILNEIKSLANEGFKEITLLGQNVNSYGNDLP--------------- 242
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ FADLL ++ R R+ + HPKD D+L++ MRD +C+++
Sbjct: 243 -----------TKIDFADLLYMINDIDGIERIRFMTSHPKDISDKLIFAMRDLDKLCEHL 291
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G++ +LERM R Y+RE YL+++ K+R IP + +++D I GF GET+++ DTL
Sbjct: 292 HLPVQSGSNKILERMNRKYSRERYLEIINKLRDNIPGIAITTDIIVGFPGETDKDFQDTL 351
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L+K V YD AY F YS R+ T A + + V E++K +RL ELI + + +
Sbjct: 352 DLVKEVRYDSAYTFIYSKRKGTPAEK-MSNQVDEDIKHKRLEELINLQNIISIEKNNEMK 410
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G V VLVEG +K+ + +L G++ V F
Sbjct: 411 GKVVEVLVEGTSKRDSE-KLTGRTRTNKIVHF 441
>gi|312135300|ref|YP_004002638.1| tRNA-i(6)a37 thiotransferase enzyme miab [Caldicellulosiruptor
owensensis OL]
gi|311775351|gb|ADQ04838.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
owensensis OL]
Length = 471
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/437 (35%), Positives = 242/437 (55%), Gaps = 46/437 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNV+D E + ++ GY E N+ E A++I NTC++R++AE +V+ +
Sbjct: 42 TYGCQMNVHDSEKLAGMLNAMGYIETENIQE-ADLIIFNTCSVREHAESRVYGNIG---- 96
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAERLK--DKILDADKMVDVVCGPDAYRDLPR 199
R + K P I+ V GCM ++L+ K+ +D++ G + P+
Sbjct: 97 ---------PLKRLKDKKPDLIIGVCGCMPQQLEVAQKLAKLFPFLDIIFGTKSLHKFPQ 147
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL ++ + + E+ + P K V+AFV+++ GCNN CS+CIVP+ RGR
Sbjct: 148 LLYTAITEKRTVIDVSENEDVVVEGIPTA-RKQGVSAFVNIIYGCNNFCSYCIVPYVRGR 206
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+ E+++L + GVKEVTLLGQNVNSY
Sbjct: 207 ERSRRPEEIIYEIEQLAQNGVKEVTLLGQNVNSYG------------------------- 241
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
K G+ F LL++++ R R+ + HPKD +EL+ MRD VC++IHLP Q+G
Sbjct: 242 KDLVNGITFPKLLEKINEIKGIERIRFVTSHPKDLSNELIAAMRDLEKVCEHIHLPVQSG 301
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L+ M R YT+E YL LV+K++ IPD+ +++D I GF GET+E+ DTL + K V
Sbjct: 302 STRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDEDFEDTLDVCKKVE 361
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D AY F YS R T A + + VP+ +K +R L++ E + +G +L
Sbjct: 362 FDSAYTFIYSKRRGTPAEK-MPNQVPDNIKHQRFQRLVKLVEEIALKKNKQMLGKTYEIL 420
Query: 500 VEGPNKKAPDTELVGKS 516
++G +K+ + LVG++
Sbjct: 421 IDGRSKR--NNLLVGRT 435
>gi|229111245|ref|ZP_04240799.1| hypothetical protein bcere0018_34910 [Bacillus cereus Rock1-15]
gi|229129049|ref|ZP_04258022.1| hypothetical protein bcere0015_34940 [Bacillus cereus BDRD-Cer4]
gi|229146344|ref|ZP_04274715.1| hypothetical protein bcere0012_34870 [Bacillus cereus BDRD-ST24]
gi|296504271|ref|YP_003665971.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis BMB171]
gi|423585817|ref|ZP_17561904.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD045]
gi|423641145|ref|ZP_17616763.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD166]
gi|423656633|ref|ZP_17631932.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD200]
gi|228636977|gb|EEK93436.1| hypothetical protein bcere0012_34870 [Bacillus cereus BDRD-ST24]
gi|228654286|gb|EEL10151.1| hypothetical protein bcere0015_34940 [Bacillus cereus BDRD-Cer4]
gi|228672239|gb|EEL27529.1| hypothetical protein bcere0018_34910 [Bacillus cereus Rock1-15]
gi|296325323|gb|ADH08251.1| tRNA 2-methylthioadenosine synthase [Bacillus thuringiensis BMB171]
gi|401233163|gb|EJR39659.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD045]
gi|401280206|gb|EJR86128.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD166]
gi|401290374|gb|EJR96068.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD200]
Length = 509
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 252/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|452995323|emb|CCQ93093.1| enzyme for ms(2)i(6)A formation for tRNA modification [Clostridium
ultunense Esp]
Length = 440
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 168/450 (37%), Positives = 244/450 (54%), Gaps = 55/450 (12%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + I++ GY N E ++ I NTC +R+ AE KV+ +L
Sbjct: 10 TYGCQMNEHDSEKISWILETMGYKWTDN-KEESDFIIYNTCLVRENAELKVYGQLGALKD 68
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCM--AERLKDKILDADKMVDVVCGPDAYRDLPR 199
LKR K+P I+ V GCM E +D IL K VD++ G LP+
Sbjct: 69 LKR-------------KNPDLILAVCGCMMQQEEARDIILSKYKHVDIIFGTGNIHKLPQ 115
Query: 200 LLEEV-DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
L+ + ++ + E DI R K S AFV++M GCNN C++CIVP+TRG
Sbjct: 116 LISRYHQINRTVVDIVEDNREIVEDIEANR--KYSFKAFVNIMYGCNNFCTYCIVPYTRG 173
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE+SR E+I+KE+++L K+G KE+TLLGQNVNSY T G +
Sbjct: 174 REKSRKPENIIKEIEDLAKKGYKEITLLGQNVNSYGKTLGYD------------------ 215
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
FA+LL+ ++ R R+ + HPKD DEL+ + VC+++HLP Q+
Sbjct: 216 -------YSFANLLEDVNKIEGIARIRFMTSHPKDLSDELIQSIAKLDKVCEHLHLPVQS 268
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ VL+ M R YT+ YL L++KI+ +PD+ +S+D I GF GETEE+ +TL L+K V
Sbjct: 269 GSNKVLKEMNRKYTKGDYLTLIEKIKNAVPDIAISTDIIVGFPGETEEDFNETLDLIKKV 328
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEA----FRESTGQCYDSQVGT 494
YD A+ F YS+R+ T A + + VP+E+K R L++ F E + D V
Sbjct: 329 RYDSAFTFLYSVRKGTIAAK-MENQVPDEIKHERFQRLLDTLYPIFYEENLKYADKIVE- 386
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +K + L G++ G + F
Sbjct: 387 ---VLVEEVSKNNENV-LTGRTRHGKLIHF 412
>gi|424888953|ref|ZP_18312556.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393174502|gb|EJC74546.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 469
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 249/463 (53%), Gaps = 45/463 (9%)
Query: 59 LAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVI 118
L PA E GS + +++ +TYGCQMNV D + + GY ++ E A+++
Sbjct: 7 LLPAPEQILRHGS---NSRKVFIKTYGCQMNVYDSTRMSDALARDGYEPTEDM-EEADLV 62
Query: 119 FINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKI 178
+NTC IR+ A KV+ L +K K+ A GR I V GC+A+ ++I
Sbjct: 63 LLNTCHIREKAAEKVYSALGRLRDMK---KRKAADGREM-----MIGVAGCVAQAEGEEI 114
Query: 179 LDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSV 234
L VDVV GP Y LP L GQ+ ++T ++E+ + + P+ +I V
Sbjct: 115 LRRAPAVDVVIGPQTYHRLPEALRRAKEGQRVVDTEYAIEDKFEHL-PIAESKKIRARGV 173
Query: 235 TAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN 294
TAF++V GC+ C+FC+VP+TRG E SRPV IV+E ++L + GV+E+TLLGQNVN+++
Sbjct: 174 TAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVSQIVEEAEKLVEGGVREITLLGQNVNAWH 233
Query: 295 DTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKD 353
G W L DLL RL+ E P + R RYT+ HP+D
Sbjct: 234 GAGPQ------GEAWSL-----------------GDLLYRLA-EIPGLARLRYTTSHPRD 269
Query: 354 FPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLS 413
D L+ RD + Y+HLP Q+G+ +L+ M R +T YL L+++IR + PD+ LS
Sbjct: 270 MDDRLIDAHRDLRALMPYLHLPVQSGSDRILKAMNRRHTAAEYLSLIERIRTVRPDIALS 329
Query: 414 SDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRL 473
DFI GF GET+ + DTL L++ V Y A+ F YS R T D VPE++K RL
Sbjct: 330 GDFITGFPGETDADFEDTLRLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEQIKAERL 388
Query: 474 TELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
L + + +S +G +L+E P + P+ +L+G+S
Sbjct: 389 ERLQALLLKQQQEFAESCIGKEIDLLLEKPG-RMPE-QLIGRS 429
>gi|342904114|ref|ZP_08725916.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M21621]
gi|342904584|ref|ZP_08726383.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M21621]
gi|417840881|ref|ZP_12486989.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M19501]
gi|419839872|ref|ZP_14363273.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus haemolyticus
HK386]
gi|341950692|gb|EGT77279.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M19501]
gi|341953005|gb|EGT79519.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M21621]
gi|341954123|gb|EGT80617.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M21621]
gi|386908974|gb|EIJ73658.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus haemolyticus
HK386]
Length = 474
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 247/448 (55%), Gaps = 40/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + ++ + E+ +PE A+V+ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
W +E KKN +P ++ V GC+A + + I VD++ GP
Sbjct: 64 GR-W---KELKKN---------NPNLVIGVGGCVASQEGEHIRHRAPYVDIIFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP ++ ++ G+ + + E D P ++ TAFVS+M GCN C+FC+VP+T
Sbjct: 111 LPEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCTFCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRPV+ ++ E+ +L +GV+EV LLGQNVN+Y R
Sbjct: 170 RGEEVSRPVDDVLFEIAQLADQGVREVNLLGQNVNAY----------------RGPTHDG 213
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+C ++ LR +D + R R+T+ HP +F D+++ + RD P + ++HLP
Sbjct: 214 QICSFAEL-LRLVASIDGID------RLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPV 266
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G+ VL M+RG+T Y +++K+R + PD+ +SSDFI GF GET E+ T+ L+
Sbjct: 267 QAGSDRVLTMMKRGHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIA 326
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +DM++ F YS R T A + DDV E+ K++RL L E + Q +GT Q
Sbjct: 327 QVNFDMSFSFVYSARPGTPAA-DMPDDVTEDEKKQRLYVLQERINQQAAQFSRRMLGTEQ 385
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK EL G+++ V F
Sbjct: 386 RVLVEGPSKKDI-MELTGRTETNRIVNF 412
>gi|417843768|ref|ZP_12489836.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M21127]
gi|341948681|gb|EGT75301.1| Dimethylallyladenosine tRNA methylthiotransferase miaB [Haemophilus
haemolyticus M21127]
Length = 474
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 247/448 (55%), Gaps = 40/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + ++ + E+ +PE A+V+ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
W +E KKN +P ++ V GC+A + + I VD++ GP
Sbjct: 64 GR-W---KELKKN---------NPNLVIGVGGCVASQEGEHIRHRAPYVDIIFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP ++ ++ G+ + + E D P ++ TAFVS+M GCN C+FC+VP+T
Sbjct: 111 LPEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCTFCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRPV+ ++ E+ +L +GV+EV LLGQNVN+Y R
Sbjct: 170 RGEEVSRPVDDVLFEIAQLADQGVREVNLLGQNVNAY----------------RGPTHDG 213
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+C ++ LR +D + R R+T+ HP +F D+++ + RD P + ++HLP
Sbjct: 214 QICNFAEL-LRLVASIDGID------RLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPV 266
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G+ VL M+RG+T Y +++K+R + PD+ +SSDFI GF GET E+ T+ L+
Sbjct: 267 QAGSDRVLTMMKRGHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIA 326
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +DM++ F YS R T A + DDV E+ K++RL L E + Q +GT Q
Sbjct: 327 QVNFDMSFSFVYSARPGTPAA-DMPDDVTEDEKKQRLYVLQERINQQAAQFSRRMLGTEQ 385
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK EL G+++ V F
Sbjct: 386 RVLVEGPSKKDI-MELTGRTETNRIVNF 412
>gi|409435790|ref|ZP_11262998.1| isopentenyl-adenosine A37 tRNA methylthiolase [Rhizobium
mesoamericanum STM3625]
gi|408752548|emb|CCM74145.1| isopentenyl-adenosine A37 tRNA methylthiolase [Rhizobium
mesoamericanum STM3625]
Length = 469
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 239/444 (53%), Gaps = 42/444 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +TYGCQMNV D + + GY E V E A+++ +NTC IR+ A KV+ L
Sbjct: 23 KVFIKTYGCQMNVYDSTRMSDALARDGY-EPTEVMEEADLVLLNTCHIREKAAEKVYSAL 81
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+K+E R++ I V GC+A+ ++IL VDVV GP Y L
Sbjct: 82 GRLREMKKE--------RNKEGREFMIGVAGCVAQAEGEEILRRAPAVDVVIGPQTYHRL 133
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPV----RISKNSVTAFVSVMRGCNNMCSFCIV 253
P L + G + ++T +LE+ + + P+ +I VT+F++V GC+ C+FC+V
Sbjct: 134 PEALRKAKDGHRIVDTEYALEDKFEHL-PIAEAKKIRSRGVTSFLTVQEGCDKFCTFCVV 192
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRPV IV+E +L + GV+E+TLLGQNVN+++ G G W L
Sbjct: 193 PYTRGSEVSRPVSQIVEEAQKLVEGGVREITLLGQNVNAWHGVGGN------GQEWTL-- 244
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
DLL RL+ E P + R RYT+ HP+D D L+ RD + Y+
Sbjct: 245 ---------------GDLLYRLA-EIPGLARLRYTTSHPRDMDDRLIEAHRDLRALMPYL 288
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q G+ +L+ M R +T YL L+++IR PD+ LS DFI GF GET+++ DTL
Sbjct: 289 HLPVQAGSDRILKAMNRRHTAAEYLALIERIRIARPDIALSGDFIVGFPGETDQDFEDTL 348
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V Y A+ F YS R T D VPEE+K RL L + + +S +
Sbjct: 349 RLVEEVRYAQAFSFKYSTRPGTPGA-ELKDQVPEEIKAERLERLQALLLKQQQEFAESCI 407
Query: 493 GTVQLVLVEGPNKKAPDTELVGKS 516
G +L+E P + +L+G+S
Sbjct: 408 GKSIELLLEKPGRMP--GQLIGRS 429
>gi|113461298|ref|YP_719367.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haemophilus
somnus 129PT]
gi|170717832|ref|YP_001784892.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Haemophilus
somnus 2336]
gi|123132137|sp|Q0I3Z1.1|MIAB_HAES1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|229890552|sp|B0UUU9.1|MIAB_HAES2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|112823341|gb|ABI25430.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus somnus 129PT]
gi|168825961|gb|ACA31332.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus somnus 2336]
Length = 474
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 248/447 (55%), Gaps = 38/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + ++ N E+ +VPE A+V+ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLLNTHGLELTDVPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ LK++ V I V GC+A + + I VD+V GP L
Sbjct: 64 GRWKELKKQNPSLV------------IGVGGCVASQEGEHIRSRAPYVDIVFGPQTLHRL 111
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P ++ ++ G+ + + E D P ++ TAFVS+M GCN CSFC+VP+TR
Sbjct: 112 PEMINQIRGGKSAVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCSFCVVPYTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
G E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y R
Sbjct: 171 GEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAY----------------RGPTHDGG 214
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+C ++ LR +D + R R+T+ HP +F D+++ + D P + ++HLP Q
Sbjct: 215 ICSFAEL-LRLVASIDGID------RLRFTTSHPIEFTDDIIDVYADTPELVSFLHLPVQ 267
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ VL M+R +T Y +++K++++ P++ +SSDFI GF GET+++ DT+ L+
Sbjct: 268 SGSDRVLNLMKRNHTALEYKSIIRKLKKVRPNIQISSDFIVGFPGETDQDFEDTMNLIAQ 327
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +DM++ F YS R T A + DDV EE K++RL L + Q + +GT Q
Sbjct: 328 VNFDMSFSFIYSARPGTPAA-DMPDDVTEEEKKQRLYLLQQRINNQAAQFSRAMLGTEQR 386
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK EL G+++ V F
Sbjct: 387 VLVEGPSKKDI-MELTGRTETNRIVNF 412
>gi|30021864|ref|NP_833495.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cereus ATCC 14579]
gi|81432671|sp|Q812Y0.1|MIAB_BACCR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|29897420|gb|AAP10696.1| tRNA 2-methylthioadenosine synthase [Bacillus cereus ATCC 14579]
Length = 509
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 252/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDFLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|310641636|ref|YP_003946394.1| tRNA-i(6)a37 thiotransferase enzyme miab [Paenibacillus polymyxa
SC2]
gi|386040660|ref|YP_005959614.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
tRNA-i(6)A37 methylthiotransferase [Paenibacillus
polymyxa M1]
gi|309246586|gb|ADO56153.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Paenibacillus polymyxa
SC2]
gi|343096698|emb|CCC84907.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
tRNA-i(6)A37 methylthiotransferase [Paenibacillus
polymyxa M1]
Length = 517
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 229/397 (57%), Gaps = 45/397 (11%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMN +D E + +++ GY + E A++I +NTCAIR+ AE KV+ L +
Sbjct: 80 TFGCQMNEHDSETIKGLLEQMGYQATEDRKE-ADIILLNTCAIRENAEDKVFGELGHLKH 138
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPRL 200
LK E K + G V GCM+ E + ++I+ VD++ G LP+L
Sbjct: 139 LKTE-KPGLLLG-----------VCGCMSQEENVVNRIMQKHGFVDMIFGTHNIHRLPQL 186
Query: 201 LEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRE 260
++E + ++ + + S E + P + + + A+V++M GC+ C++CIVPFTRG+E
Sbjct: 187 VKEALFSKEMVVEVWSKEGDIIENLPKK--REGMRAWVNIMYGCDKFCTYCIVPFTRGKE 244
Query: 261 RSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCK 320
RSR E ++ EV +L ++G KE+TLLGQNVN+Y
Sbjct: 245 RSRRPEDVIAEVRDLARQGFKEITLLGQNVNAYGKD------------------------ 280
Query: 321 VKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+K M RF DL+D + + P R R+T+ HP+DF D L+ ++ N+ ++IHLP Q+G
Sbjct: 281 LKDMNYRFGDLMDDMRKINIP--RVRFTTSHPRDFDDHLVEVLGKGGNLVEHIHLPVQSG 338
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
N+ +L++M R YTRE L+L KI+ +P V L++D I GF GET+E+ DTL+L++ VG
Sbjct: 339 NTDILKKMNRKYTRERVLELAAKIKAAVPHVSLTTDIIVGFPGETDEQFEDTLSLVREVG 398
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTEL 476
YD AY F YS RE T A + D+VP VK+ RL L
Sbjct: 399 YDFAYTFIYSPREGTPA-ASMEDNVPMSVKKERLRRL 434
>gi|336400416|ref|ZP_08581195.1| Dimethylallyladenosine tRNA methylthiotransferase miaB
[Fusobacterium sp. 21_1A]
gi|336162604|gb|EGN65568.1| Dimethylallyladenosine tRNA methylthiotransferase miaB
[Fusobacterium sp. 21_1A]
Length = 435
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 246/453 (54%), Gaps = 64/453 (14%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNVN+ + I +N GY ++ +NA+ +F+NTC +R+ A +++ +L
Sbjct: 8 TYGCQMNVNESAKIKKIFQNLGY-DITEEIDNADAVFLNTCTVREGAATQIFGKLGELKA 66
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
LK K I V GC A+ ++++ ++D+V G +P+ +E
Sbjct: 67 LKE-------------KRGTIIGVTGCFAQEQGEELVKKFPIIDIVMGNQNIGRIPQAIE 113
Query: 203 EVDYGQKGINTLLSLEETYADIS---PVRISK---NSVTAFVSVMRGCNNMCSFCIVPFT 256
+++ + S E Y D P R+ + TA +S+ GCNN C+FCIVP+
Sbjct: 114 KIENNE-------STHEVYTDNEDELPPRLDAEFGSDQTASISITYGCNNFCTFCIVPYV 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P+E IVK+V++ K+G KE+ LLGQNVNSY G ++
Sbjct: 167 RGRERSVPLEEIVKDVEQYVKKGAKEIVLLGQNVNSY------------GKDF------- 207
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
K G FA LLD + + R+ SPHP+DF D+++ ++ + K +HLP
Sbjct: 208 ------KNGDNFAKLLDEICKVKGDYIVRFVSPHPRDFTDDVIDVIAKNDKISKCLHLPL 261
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+S +L +M RGYT+E YL LV KI+ I V L++D I GF GETEE+ DT+ +++
Sbjct: 262 QSGSSQILRKMGRGYTKEKYLALVDKIKSKISGVALTADIIVGFPGETEEDFLDTIDVVQ 321
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIE-----AFRESTGQCYDSQ 491
V +D +YMF YS+R+ T A + + E VK+ RL L+E +F ES+ Y +
Sbjct: 322 KVSFDNSYMFMYSIRKGTKAA-TMDNQIDESVKKERLQRLMEVQNKCSFNESSK--YKDK 378
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEGP+KK + L G++ V F
Sbjct: 379 ---IVRVLVEGPSKKNKEV-LSGRTSTNKIVLF 407
>gi|328952579|ref|YP_004369913.1| (dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Desulfobacca acetoxidans DSM 11109]
gi|328452903|gb|AEB08732.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Desulfobacca acetoxidans DSM 11109]
Length = 440
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 240/448 (53%), Gaps = 47/448 (10%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y +TYGCQMNV D E + I+ ++ + PE A++ INTC+IR +E KV +
Sbjct: 8 LYIKTYGCQMNVYDSEQIALILGRD--YDLTDRPEEADLYLINTCSIRRKSEEKVLSLVG 65
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK ++ P ++ V GC+A++ +++L +D+V G L
Sbjct: 66 RLKGLK-------------NRRPQMLLGVGGCVAQQEGERLLQRAPHLDLVFGAQGIYRL 112
Query: 198 PRLLEE-VDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P LL + ++ G+ ++T S + Y ++ + V++M+GCNN C++C+VP+
Sbjct: 113 PHLLHQRLESGKAVVDTSFSADLPYIS---GQVKPGAPKKLVTIMQGCNNYCTYCVVPYV 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG ERSRP ++ EV + ++G +EVTLLGQNVNSY G+
Sbjct: 170 RGPERSRPAAEVINEVQDFLRQGGQEVTLLGQNVNSYG--KGLAD--------------- 212
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
GL F LL RL+ +R R+T+ HP+D D+L+ + P +C +IHLP
Sbjct: 213 --------GLSFPGLLRRLAKLPGLVRLRFTTSHPRDLSDDLICCFAELPPLCDHIHLPV 264
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G++ +L RM RGYTRE YL V ++RQI P + L++D I GF GETE + ADTL LM+
Sbjct: 265 QAGSNHILARMHRGYTREEYLHKVNRLRQICPGISLTTDLIVGFPGETEADFADTLALMR 324
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D A+ F YS R +T A VD +PE VK RL L E + VG +
Sbjct: 325 EVAFDAAFYFKYSPRPQTAAA-ALVDQIPEPVKAERLARLRILQEELSLASNQRLVGQFK 383
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K+ + +L G+ V F
Sbjct: 384 EVLVEGLSKQQ-NQQLCGRLRSNQVVNF 410
>gi|229086321|ref|ZP_04218499.1| hypothetical protein bcere0022_29080 [Bacillus cereus Rock3-44]
gi|228697016|gb|EEL49823.1| hypothetical protein bcere0022_29080 [Bacillus cereus Rock3-44]
Length = 509
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + ++A+VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-KDADVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LK+ ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKPLKQ-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + + + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKATVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I+ E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIINEIRHLAANGYKEITLLGQNVNAYGKDF---EDLEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KIDIARVRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L E + + VG
Sbjct: 387 YREVGFDSAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNEYSIEKNKRYVGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K PD L G + V F
Sbjct: 446 IVEVLVDGESKNNPDV-LAGYTRANKLVNF 474
>gi|315497214|ref|YP_004086018.1| MiaB family RNA modification protein [Asticcacaulis excentricus CB
48]
gi|315415226|gb|ADU11867.1| RNA modification enzyme, MiaB family [Asticcacaulis excentricus CB
48]
Length = 470
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 245/461 (53%), Gaps = 42/461 (9%)
Query: 63 SEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINT 122
SE +SA ++H + TYGCQMNV D E + +++ GY+ V + E A+++ +NT
Sbjct: 17 SETASAASKKLHIK------TYGCQMNVYDSERMADLLRPLGYA-VSDQAEGADLVLLNT 69
Query: 123 CAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDAD 182
C IR+ A KV+ + +++E K+ GR I V GC+A+ ++I++
Sbjct: 70 CHIREKAAEKVYSEIGRLKVMRQE-KEARGEGRM------TIAVAGCVAQAEGEEIMNRA 122
Query: 183 KMVDVVCGPDAYRDLPRLLEEVDYGQ-KGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
VD+V GP AY LP L+ + + + + E+ + +S R + TAF++V
Sbjct: 123 PAVDLVVGPQAYHQLPELIARTTRAKGERLKADFAPEDKFDALSTER-QASGPTAFLTVQ 181
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
GC+ C+FC+VP+TRG E SRPV SI++E L +GV+E+TLLGQNVN+YN G E
Sbjct: 182 EGCDKFCTFCVVPYTRGAEWSRPVASILEEARSLASKGVREITLLGQNVNAYN---GREA 238
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
+ E RL + + + + LDR+ RYT+ HP D DEL+
Sbjct: 239 DGEESTLPRLMQALSEI-----------EGLDRI---------RYTTSHPNDMTDELIRA 278
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ P V Y+HLP Q+G+ +L M R + R+AY+DL+ +++ +P++ LS DFI GF
Sbjct: 279 HAENPAVMPYLHLPVQSGSDKILRAMNRKHGRQAYIDLIARLKAAVPNIALSGDFIVGFP 338
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
GETE++ DT+ L++ VGY A+ F YS R T A V E V RL L
Sbjct: 339 GETEKDFEDTMDLIRTVGYASAFSFKYSKRPGTPA-AAMPGQVDEAVADGRLQALQALIN 397
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
E S VG VL E P + + VG+S H V
Sbjct: 398 EQAQAFKASLVGQTIDVLFEKPGRYG--QQAVGRSPWLHAV 436
>gi|307243249|ref|ZP_07525420.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptostreptococcus
stomatis DSM 17678]
gi|306493377|gb|EFM65359.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptostreptococcus
stomatis DSM 17678]
Length = 479
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/446 (35%), Positives = 251/446 (56%), Gaps = 45/446 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMN +D E+++++++ GY + ++ + A+++ NTCA+R+ AE KV+ L +
Sbjct: 45 TFGCQMNEHDSEMLINMLEAMGYVQALS-EDQADLVIYNTCAVRENAELKVYGNLGHLKS 103
Query: 143 LKREWKKNVATGRSQSKHPP-KIVVLGCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
+K+ K P KIVV GCM ++ + ++I + VD++ G P
Sbjct: 104 IKK-------------KRPDMKIVVCGCMMQQPHVVEEIKKKYRHVDLIFGTHNLYKFPE 150
Query: 200 LLEEVDYGQKGINTLLSLE-ETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
LLE K I + ++ E + R K + AFV++M GCNN C++CIVP+TRG
Sbjct: 151 LLESTFNRDKIIVDVWDVDGEVVEGLKSNR--KFEIKAFVNIMYGCNNFCTYCIVPYTRG 208
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERSR I+ E+ L K+G KEVTLLGQNVNSY T ++++
Sbjct: 209 RERSRKPGDIIDEIRSLVKDGTKEVTLLGQNVNSYGKTLEDDQKIS-------------- 254
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
FA LL ++ R R+ + HPKD D+++Y MRD VC+++HLP Q
Sbjct: 255 ---------FAQLLREVNKIDGLERIRFMTSHPKDISDDVIYAMRDCDKVCEFLHLPFQA 305
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++++L++M R YT+E YL +++K ++ IP++ S+D + GF GET+++ DT+ + + V
Sbjct: 306 GSTSLLKKMNRHYTKEDYLKIIEKAKREIPNLAFSTDIMIGFPGETDQDVDDTIDICEQV 365
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
YD A+ F YS R T A + +D VP++VK +R ++E +G+ + +G V
Sbjct: 366 RYDSAFTFIYSKRRGTPAAK-MLDQVPDDVKHQRFERVLEVVNRISGEKNANYLGKTLEV 424
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +KK + L GKS V F
Sbjct: 425 LVEGASKKN-EAVLTGKSRHNKTVNF 449
>gi|30263778|ref|NP_846155.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
anthracis str. Ames]
gi|47529199|ref|YP_020548.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
anthracis str. 'Ames Ancestor']
gi|49186622|ref|YP_029874.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
anthracis str. Sterne]
gi|165872391|ref|ZP_02217026.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167635860|ref|ZP_02394169.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167639855|ref|ZP_02398124.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170687836|ref|ZP_02879050.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170706889|ref|ZP_02897347.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177652051|ref|ZP_02934597.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190568422|ref|ZP_03021329.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227813320|ref|YP_002813329.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
anthracis str. CDC 684]
gi|229602893|ref|YP_002868014.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
anthracis str. A0248]
gi|254683519|ref|ZP_05147379.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
CNEVA-9066]
gi|254722040|ref|ZP_05183829.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
A1055]
gi|254735812|ref|ZP_05193518.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
Western North America USA6153]
gi|254739662|ref|ZP_05197356.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
Kruger B]
gi|254751058|ref|ZP_05203097.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
Vollum]
gi|254759376|ref|ZP_05211401.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
Australia 94]
gi|386737595|ref|YP_006210776.1| TRNA 2-methylthioadenosine synthase [Bacillus anthracis str. H9401]
gi|421639527|ref|ZP_16080118.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
anthracis str. BF1]
gi|81583703|sp|Q81WR0.1|MIAB_BACAN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|30258422|gb|AAP27641.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47504347|gb|AAT33023.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180549|gb|AAT55925.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|164711829|gb|EDR17371.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167512256|gb|EDR87633.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167528817|gb|EDR91575.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170128307|gb|EDS97176.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170668152|gb|EDT18901.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172082420|gb|EDT67485.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190560426|gb|EDV14404.1| conserved hypothetical protein [Bacillus anthracis str.
Tsiankovskii-I]
gi|227004716|gb|ACP14459.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
CDC 684]
gi|229267301|gb|ACQ48938.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus anthracis str.
A0248]
gi|384387447|gb|AFH85108.1| TRNA 2-methylthioadenosine synthase [Bacillus anthracis str. H9401]
gi|403393192|gb|EJY90437.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
anthracis str. BF1]
Length = 509
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 252/449 (56%), Gaps = 43/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LKR ++ G V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKRR-NSDLLIG-----------VCGCMSQEESVVNKIMQKNQHVDMVFGTHNIH 173
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP+
Sbjct: 174 RLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVPY 232
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 233 TRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG--------- 280
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHLP
Sbjct: 281 ------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLP 327
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 328 VQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLY 387
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + D G +
Sbjct: 388 REVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNDRYKGQI 446
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLV+G +K P+ L G + V F
Sbjct: 447 VEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|445486009|ref|ZP_21457160.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
AA-014]
gi|444769954|gb|ELW94118.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acinetobacter baumannii
AA-014]
Length = 483
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 261/477 (54%), Gaps = 49/477 (10%)
Query: 57 ADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAE 116
A A + V+ T + S ++Y ET GCQMN D + ++ ++ + N P A+
Sbjct: 11 AKAASENTVTQPTHTTDVSIKKLYIETQGCQMNEYDSHRMADLLGDSHGYVLTNNPNEAD 70
Query: 117 VIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKD 176
++ +NTC+IR+ A+ KV+ L W +E ++ G V GC+A + D
Sbjct: 71 ILLMNTCSIREKAQEKVFSELGR-WRKLKEQNPDLVIG-----------VGGCVASQEGD 118
Query: 177 KILDADKMVDVVCGPDAYRDLPRLLEE----VDYGQKGINTLLSLEETYADISPVRISKN 232
I VD++ GP LP++L++ V+ +K L+ + ++ DI
Sbjct: 119 NIQKRAPYVDMIFGPQTLHRLPQMLDQHHAQVEKPKKEKIKLVDI--SFPDIEKFDFLPE 176
Query: 233 ----SVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQ 288
AFVS+M GC+ CSFC+VP+TRG E SRP++ ++ E+ L ++GV+E++LLGQ
Sbjct: 177 PRVEGFKAFVSIMEGCSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAEKGVREISLLGQ 236
Query: 289 NVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYT 347
NVN Y G + EG +C F +LL RL E P + R RYT
Sbjct: 237 NVNGYR-----------GETF---EG--GICT-------FPELL-RLVAEIPGIGRLRYT 272
Query: 348 SPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII 407
+ HP +F DEL+ D P + ++HLP Q+G++ VL+ M+R +T + Y+D + K+R+I
Sbjct: 273 TSHPLEFSDELIQCYEDLPQMVSHLHLPVQSGSNDVLKAMKRNHTIDVYIDKIAKLRKIR 332
Query: 408 PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEE 467
PD+ LSSDFI GF GET+E A+TL +K + +D +Y F YS R T A + D PE
Sbjct: 333 PDMHLSSDFIIGFPGETDENFAETLQFIKDLNFDHSYSFVYSKRPGTPA-SDLPDTTPEH 391
Query: 468 VKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VK+ RL ++ + ++S+ + D+ +G ++ VL+E + + P+ LVG +D VAF
Sbjct: 392 VKKERLAQVQQVIKQSSIEKTDAMLGKIERVLIEKVSDQDPNI-LVGTADNTRLVAF 447
>gi|421507314|ref|ZP_15954234.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
anthracis str. UR-1]
gi|401822448|gb|EJT21598.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
anthracis str. UR-1]
Length = 455
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 252/449 (56%), Gaps = 43/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 13 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 71
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LKR ++ G V GCM+ E + +KI+ ++ VD+V G
Sbjct: 72 GHLKSLKRR-NSDLLIG-----------VCGCMSQEESVVNKIMQKNQHVDMVFGTHNIH 119
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP+
Sbjct: 120 RLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVPY 178
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 179 TRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG--------- 226
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHLP
Sbjct: 227 ------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLP 273
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 274 VQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLY 333
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + D G +
Sbjct: 334 REVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNDRYKGQI 392
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLV+G +K P+ L G + V F
Sbjct: 393 VEVLVDGESKNNPEV-LAGYTRTNKLVNF 420
>gi|345017666|ref|YP_004820019.1| (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
[Thermoanaerobacter wiegelii Rt8.B1]
gi|344033009|gb|AEM78735.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 471
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/429 (37%), Positives = 246/429 (57%), Gaps = 46/429 (10%)
Query: 82 ETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFW 141
ETYGCQMNV+D E + +++ GY N+ E A+V+ NTCA+R++AE +V R++
Sbjct: 36 ETYGCQMNVHDSEKLAGMLEKMGYKYTENL-EQADVLLFNTCAVREHAEIRVLGRVSQMK 94
Query: 142 FLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVVCGPDAYRDLP 198
LK +++P I+ V GCM + + + I + +D+V G P
Sbjct: 95 ELK-------------ARNPNLIIGVSGCMMQEKNVVEAIKEKYSYIDIVFGTHNIYKFP 141
Query: 199 RLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
+LL E Q + ++ + + PV+ N + A+V+++ GCNN C++CIVP+TRG
Sbjct: 142 QLLWEALNSQDIVIDIIEDTKNVIEELPVKRDSN-LKAWVNIIYGCNNFCTYCIVPYTRG 200
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RE+SR E I+ EV EL ++G KE+TLLGQNVNSY K+++
Sbjct: 201 REKSRKPEDIIAEVKELAQKGYKEITLLGQNVNSYG------KDLDED------------ 242
Query: 319 CKVKKMGLRFADLLDRLS-LEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ FA LL +L+ +E E R R+ + HPKD DEL+Y +RD VC+++HLP Q
Sbjct: 243 -------ITFAKLLYKLNDIEGIE-RIRFMTSHPKDISDELIYAIRDLDKVCEHLHLPVQ 294
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
G++ +L++M R YT+E YL+++ K+R IPD+ +++D I GF GETEE+ +TL L++
Sbjct: 295 AGSNKILKKMNRKYTKEHYLEIIDKVRSNIPDIAITTDIIVGFPGETEEDFLETLDLVER 354
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D AY F YS R T A N D V + +K RL LIE + + + G +
Sbjct: 355 VRFDAAYTFIYSKRAGTVA-ANMPDQVDDAIKHERLERLIELQNKISLEKSAELRGKIVE 413
Query: 498 VLVEGPNKK 506
VL+EG +K+
Sbjct: 414 VLIEGISKR 422
>gi|300855303|ref|YP_003780287.1| MiaB protein [Clostridium ljungdahlii DSM 13528]
gi|300435418|gb|ADK15185.1| putative MiaB protein [Clostridium ljungdahlii DSM 13528]
Length = 447
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 241/448 (53%), Gaps = 45/448 (10%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
+ ET+GCQMN D E + ++K GY + +A++I NTC +R+ AE KV+ L
Sbjct: 13 FIETWGCQMNEEDSEKLSGMLKRLGYKRTED-RSSADLIIFNTCCVRENAELKVYGNLGM 71
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAYRD 196
LK K+P I+ + GCM ++ + I+ VD++ G
Sbjct: 72 LKKLK-------------IKNPNLIIAICGCMMQQKDMAKNIIKRFPFVDIIFGTHNAYK 118
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P L V + + E + P+ N V AFV++ GCNN C++CIVP+
Sbjct: 119 FPEYLNRVQQENTSVIEIQDKESGIVEGLPIDRESN-VKAFVTITYGCNNFCTYCIVPYV 177
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERSR E I KE+ EL +G KE+TLLGQNVNSY T +EP +
Sbjct: 178 RGRERSRKPEDIEKEIKELISKGYKEITLLGQNVNSYGKT------LEPKVS-------- 223
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
F+DLL R++ R R+ + PKD ++++ + + VC+ IHLP
Sbjct: 224 -----------FSDLLRRINSIDGVERIRFMTSQPKDLTEDVVDAVAECSKVCEQIHLPV 272
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++++L++M R Y++E YL+LV+ IR+ +PD +++D I GF GETEE+ +TL L +
Sbjct: 273 QSGSTSLLKKMNRSYSKEGYLNLVKMIREKVPDAAITTDIIVGFPGETEEDFEETLNLAR 332
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD A+ F YS R+ T A+ ++ D +PE++K R L+E ES+ + G +
Sbjct: 333 EVQYDSAFTFIYSKRKGTPAY-DFEDQIPEDIKHERFNRLVEVINESSARKNKDYEGRTE 391
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+LVEG +K +T+L G++ G V F
Sbjct: 392 EILVEGTSKN-DNTKLTGRTRSGKLVNF 418
>gi|228992460|ref|ZP_04152388.1| hypothetical protein bpmyx0001_32010 [Bacillus pseudomycoides DSM
12442]
gi|229000596|ref|ZP_04160136.1| hypothetical protein bmyco0003_51290 [Bacillus mycoides Rock3-17]
gi|229006018|ref|ZP_04163707.1| hypothetical protein bmyco0002_29390 [Bacillus mycoides Rock1-4]
gi|228755217|gb|EEM04573.1| hypothetical protein bmyco0002_29390 [Bacillus mycoides Rock1-4]
gi|228759151|gb|EEM08157.1| hypothetical protein bmyco0003_51290 [Bacillus mycoides Rock3-17]
gi|228767281|gb|EEM15916.1| hypothetical protein bpmyx0001_32010 [Bacillus pseudomycoides DSM
12442]
Length = 509
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 252/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+VI +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTTLGYEPTFST-EDADVILLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LK+ ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKPLKQ-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + + + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKATVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I+ E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIINEIRHLAANGYKEITLLGQNVNAYGKDF---EDLEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KIDIARVRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L E + + G
Sbjct: 387 YREVGFDSAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNEYSMEKNKRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K PD L G + V F
Sbjct: 446 IVEVLVDGESKNNPDV-LAGYTRTNKLVNF 474
>gi|126735009|ref|ZP_01750755.1| tRNA-i(6)A37 modification enzyme MiaB [Roseobacter sp. CCS2]
gi|126715564|gb|EBA12429.1| tRNA-i(6)A37 modification enzyme MiaB [Roseobacter sp. CCS2]
Length = 435
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 235/446 (52%), Gaps = 47/446 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +TYGCQMNV D E + + GY E P++A++I +NTC IR+ A KV+ L
Sbjct: 6 KLYIKTYGCQMNVYDSERMAEALGGKGYVET-QTPDDADMILLNTCHIREKAAEKVYSEL 64
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
F LK E +P KI V GC+A+ ++I+ MVD+V GP +Y
Sbjct: 65 GRFKRLKAE-------------NPDLKIGVAGCVAQAEGEEIIKRQPMVDLVVGPQSYHR 111
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP + + + G K ++T ++ + + +K TAF++V GC+ C+FC+VP+T
Sbjct: 112 LPAMDDAIQTGAKALDTDFPDDDKFETLKTRTKAKRGPTAFLTVQEGCDKFCAFCVVPYT 171
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP + I++E EL + GVKE+TLLGQNVN+Y+ +G G W L
Sbjct: 172 RGAEVSRPADRIIREAQELVESGVKEITLLGQNVNAYHGHAGGLA----GLIWAL----- 222
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
D +D L R R+T+ HP D D L+ + Y+HLP
Sbjct: 223 -------------DKVDGLE------RIRFTTSHPNDMDDALIEAHGRCDKLMPYLHLPV 263
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L+ M R +T E+Y+ L+ +IRQ PD+ LS DFI GF GET+++ DT+ L++
Sbjct: 264 QSGSDRILKAMNRKHTGESYVRLIARIRQARPDLLLSGDFIVGFPGETDQDFEDTMQLVR 323
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y AY F YS R T A +PE+V RL L RE + VG
Sbjct: 324 DVHYGQAYSFKYSTRPGTPAAEK--PQLPEDVMNDRLQRLQALLREQQQATQAAMVGREV 381
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRV 522
VL E ++ +++GKS+ H V
Sbjct: 382 KVLFEKAGREP--GQMIGKSEYLHAV 405
>gi|65321098|ref|ZP_00394057.1| COG0621: 2-methylthioadenine synthetase [Bacillus anthracis str.
A2012]
Length = 524
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 252/449 (56%), Gaps = 43/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 82 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 140
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LKR ++ G V GCM+ E + +KI+ ++ VD+V G
Sbjct: 141 GHLKSLKRR-NSDLLIG-----------VCGCMSQEESVVNKIMQKNQHVDMVFGTHNIH 188
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP+
Sbjct: 189 RLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVPY 247
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 248 TRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG--------- 295
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHLP
Sbjct: 296 ------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLP 342
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 343 VQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLY 402
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + D G +
Sbjct: 403 REVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNDRYKGQI 461
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLV+G +K P+ L G + V F
Sbjct: 462 VEVLVDGESKNNPEV-LAGYTRTNKLVNF 489
>gi|312622276|ref|YP_004023889.1| tRNA-i(6)a37 thiotransferase enzyme miab [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202743|gb|ADQ46070.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Caldicellulosiruptor
kronotskyensis 2002]
Length = 471
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/437 (35%), Positives = 241/437 (55%), Gaps = 46/437 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMNV+D E + I+ GY E N+ E A++I NTC++R++AE +V+ +
Sbjct: 42 TYGCQMNVHDSEKLAGILNAMGYIETENIQE-ADLIIFNTCSVREHAESRVYGNIG---- 96
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAERLK--DKILDADKMVDVVCGPDAYRDLPR 199
R + K P I+ V GCM ++++ K+ +D++ G + P+
Sbjct: 97 ---------PLKRLKEKKPDLIIGVCGCMPQQVEVAQKLAKLFPFLDIIFGTKSLHKFPQ 147
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
LL +K + + E+ + P + V+AFV+++ GCNN CS+CIVP+ RGR
Sbjct: 148 LLYTAITEKKTVIDVSEDEDVVVEGIPTA-RRQGVSAFVNIIYGCNNFCSYCIVPYVRGR 206
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+ E+++L + G+KEVTLLGQNVNSY G
Sbjct: 207 ERSRQPEEIIYEIEQLAQNGIKEVTLLGQNVNSYGKDLGN-------------------- 246
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+ F LL++++ R R+ + HPKD DEL+ MRD VC++IHLP Q+G
Sbjct: 247 -----NITFPKLLEKVNEIKGIERIRFVTSHPKDLSDELIVAMRDLEKVCEHIHLPVQSG 301
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++ +L+ M R YT+E YL LV+K++ IPD+ +++D I GF GET+E+ DTL + + V
Sbjct: 302 STRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDEDFEDTLDVCRKVE 361
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D AY F YS R T A + + VP+ +K +R L++ E + +G +L
Sbjct: 362 FDSAYTFIYSKRRGTPAEK-MPNQVPDNIKHQRFQRLVKLVEEIALKKNRQMLGRTYEIL 420
Query: 500 VEGPNKKAPDTELVGKS 516
++G +K+ + LVG++
Sbjct: 421 IDGRSKR--NNLLVGRT 435
>gi|325107255|ref|YP_004268323.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Planctomyces brasiliensis
DSM 5305]
gi|324967523|gb|ADY58301.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Planctomyces brasiliensis
DSM 5305]
Length = 497
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 242/454 (53%), Gaps = 51/454 (11%)
Query: 71 SEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAE 130
S+ + +++ ET GCQMNV D E+V++ ++ GY E+ + + A+ I NTC++R++AE
Sbjct: 13 SQSEAPKKLFIETVGCQMNVLDSELVVAALRKDGY-ELTDNMKKADTILFNTCSVREHAE 71
Query: 131 HKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCG 190
K++ +L + K Q++ I V+GCMA++ + KI VD+V G
Sbjct: 72 QKIYSQLGRLKYSK------------QTRPDLVIGVMGCMAQKDQKKIFQKAPQVDLVVG 119
Query: 191 PDAYRDLPRLLEE----------VDYGQKGINTLLSLEETYADISPVR---ISKNSVTAF 237
++PRL+ E V +KG T + ++ P+R + + AF
Sbjct: 120 TGQLAEIPRLVVEAREKRDRQLAVSLSRKG-GTRQEVSSSFQSYDPLRDPEMRPSPYQAF 178
Query: 238 VSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTS 297
V + GC+ C++C+VP TRG E+SR I+KE L +GV+E+TLLGQ VNSY T
Sbjct: 179 VRITFGCDKFCTYCVVPMTRGPEQSRNPSEILKETKALADQGVQEITLLGQTVNSYRLT- 237
Query: 298 GMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDE 357
E G +RL ADLL L R ++ + +PKD ++
Sbjct: 238 ------ENGKEYRL-----------------ADLLTMLHEVEGIKRIKFVTNYPKDMTND 274
Query: 358 LLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFI 417
LL +RD V Y+H+P Q G L+ M+RGYT E Y D++ +IR+ +P +SSDFI
Sbjct: 275 LLQAVRDYKKVSHYLHVPLQHGCDEQLKLMKRGYTTEDYRDMMGRIREHLPHASVSSDFI 334
Query: 418 CGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELI 477
GFCGETEE H +L ++ + +++F YS R T A N+ DD+P+EVK+RR E++
Sbjct: 335 VGFCGETEESHQKSLEAIREYRFKNSFIFKYSERAGTKAAANFADDIPDEVKKRRNNEML 394
Query: 478 EAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
+ + + +G VLVEGP+K A E
Sbjct: 395 DLQNAISAEDNAEFIGREVEVLVEGPSKNAVKAE 428
>gi|121606262|ref|YP_983591.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Polaromonas
naphthalenivorans CJ2]
gi|229890592|sp|A1VSP2.1|MIAB_POLNA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|120595231|gb|ABM38670.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Polaromonas
naphthalenivorans CJ2]
Length = 447
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 237/443 (53%), Gaps = 45/443 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNA-GYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ +T+GCQMN D + + ++ A GY N+ E A++I NTC++R+ A+ KV+
Sbjct: 4 KVFIKTFGCQMNEYDSDKMSDVLHAAEGYENTQNIDE-ADLILFNTCSVREKAQEKVFSD 62
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L LK K V G V GC+A + + I+ VDVV GP
Sbjct: 63 LGRVKHLK---AKGVLIG-----------VGGCVASQEGEAIIQRAPYVDVVFGPQTLHR 108
Query: 197 LPRLL-EEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP+LL G+ ++ E + + P R+ S AFVS+M GC+ CS+C+VP+
Sbjct: 109 LPQLLASRARLGKPQVDISFPEIEKFDHLPPARVEGAS--AFVSIMEGCSKYCSYCVVPY 166
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRP E ++ EV L +GVKEVTLLGQNVN+Y + G E+
Sbjct: 167 TRGEEVSRPFEDVLVEVAGLADQGVKEVTLLGQNVNAYRGSMGGTAEIAD---------- 216
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FA LL+ +S E P + R RY + HP +F L+ P + ++HL
Sbjct: 217 ------------FATLLEYVS-EIPGIERIRYITSHPNEFTQRLIDAYATLPKLVNHLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q G+ +L M+RGYT Y ++K+R I PD+ +SSDFI GF GETE++ + L
Sbjct: 264 PVQHGSDRILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEDDFEKLMKL 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VGYD ++ F +S R T A N DD P EVK +RL L +S S++GT
Sbjct: 324 VNDVGYDTSFSFIFSPRPGTPAA-NLADDTPHEVKLKRLQHLQATLDDSVRAISASRLGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSD 517
VQ +LVEG +K +EL+G+++
Sbjct: 383 VQRILVEGTARKDA-SELMGRTE 404
>gi|229890684|sp|Q5FPF1.2|MIAB_GLUOX RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
Length = 475
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/469 (34%), Positives = 247/469 (52%), Gaps = 44/469 (9%)
Query: 53 SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVP 112
+ P + PAS ++ TG ++ T+GCQMNV D + +++ GY V P
Sbjct: 3 TAPTSPALPASSDTAPTGPAPRG---LHVITWGCQMNVYDSARMADVLRPLGYGPV-ERP 58
Query: 113 ENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAE 172
E+A+++ +NTC IR+ A KV+ L ++ E N A R+ I V GC+A+
Sbjct: 59 EDADMVILNTCHIRERATEKVFSELGRLRKIRDERMSNGAD-RT------IIAVAGCVAQ 111
Query: 173 RLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKG-INTLLSLEETY----ADISPV 227
+ IL VD+V GP Y LP ++ I T +E+ + D +P
Sbjct: 112 AEGEVILTRAPYVDLVLGPQTYHKLPEMVARAARAGGAVIETDFPVEQKFDFLPTDAAPQ 171
Query: 228 RISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLG 287
++ ++TAF+++ GC+ CSFC+VP+TRG E SRPV S++ E + + GV+E+TLLG
Sbjct: 172 --TQGNLTAFLTIQEGCDKFCSFCVVPYTRGAETSRPVASVLAEARRMAESGVREITLLG 229
Query: 288 QNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYT 347
QNVN+Y+ G G + L+ + ++ +G R RY
Sbjct: 230 QNVNAYHGDDGK------GGSETLAGLVEQLAQIPGLG-----------------RIRYM 266
Query: 348 SPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII 407
+ HP+D L+ RD P + ++HLP Q+G+ +L+ M RG+T + Y + V+K+R+
Sbjct: 267 TSHPRDVDQSLIDAHRDNPALMPFLHLPVQSGSDRILKAMNRGHTADEYRESVRKLREAR 326
Query: 408 PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEE 467
PD+ LSSDFI G GETEE+ T+ L++ +G+ MAY F YS R T A + VPE+
Sbjct: 327 PDLALSSDFIVGHPGETEEDFEATMQLVRDIGFAMAYSFKYSPRPGTPAAGQPM-QVPED 385
Query: 468 VKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
VK RRL EL RE VGTVQ +LV +K ++ G+S
Sbjct: 386 VKDRRLAELQALLREQQDAFNADMVGTVQEILVTNRGRKP--GQIAGRS 432
>gi|229047455|ref|ZP_04193047.1| hypothetical protein bcere0027_34400 [Bacillus cereus AH676]
gi|228723899|gb|EEL75252.1| hypothetical protein bcere0027_34400 [Bacillus cereus AH676]
Length = 509
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 252/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E+A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EDADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKSLKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDPLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IPD L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|404316811|ref|ZP_10964744.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ochrobactrum
anthropi CTS-325]
Length = 462
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 245/467 (52%), Gaps = 46/467 (9%)
Query: 53 SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVP 112
S + DL P +E + +++ +TYGCQMNV D + + + GY + P
Sbjct: 2 SDNITDLEPTAERPNVR--------KVFVKTYGCQMNVYDSQRMADSLAAEGYV-ATDTP 52
Query: 113 ENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAE 172
++A+++ +NTC IR+ A K++ L +K + N G+ + I V GC+A+
Sbjct: 53 DDADLVLLNTCHIREKASEKLYSALGRLRKMKDAREAN---GKELT-----IGVAGCVAQ 104
Query: 173 RLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADI-SPVR--I 229
+IL VD+V GP Y LP L V G+K + T +LE+ + + SP R
Sbjct: 105 AEGQEILRRAPNVDLVIGPQTYHRLPNALARVRSGEKVVETEYALEDKFEHLPSPKREET 164
Query: 230 SKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQN 289
K V+AF++V GC+ C+FC+VP+TRG E SR V+ IV E + L GV+E+TLLGQN
Sbjct: 165 RKRGVSAFLTVQEGCDKFCTFCVVPYTRGSEVSRSVKQIVAEAERLADSGVRELTLLGQN 224
Query: 290 VNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSP 349
VN+++ + G W L E + ++ + R RYT+
Sbjct: 225 VNAWHGAG------DDGREWGLGELLFRLARIPGIA-----------------RLRYTTS 261
Query: 350 HPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPD 409
HP+D D L+ RD + Y+HLP Q+G+ +L+ M R + + Y+ L+++IR++ PD
Sbjct: 262 HPRDMDDSLIAAHRDLRQLMPYLHLPVQSGSDRILKAMNRRHKADEYVRLIERIREVRPD 321
Query: 410 VGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVK 469
+ LS DFI GF GET+++ DT+ L++AV Y AY F YS R T + D V E VK
Sbjct: 322 LALSGDFIVGFPGETDQDFEDTMQLVRAVNYAQAYSFKYSPRPGTPGA-DLDDHVEEAVK 380
Query: 470 QRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKS 516
RL L E DS +G VL+E P + A ++VG+S
Sbjct: 381 DERLQRLQALLSEQQYAFQDSMIGREMDVLLEKPGRVA--GQMVGRS 425
>gi|366162298|ref|ZP_09462053.1| RNA modification protein [Acetivibrio cellulolyticus CD2]
Length = 477
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 241/450 (53%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R Y T+GCQMN +D E + ++ GYSE ++ E+ +IF NTC +R+ AE KV+ L
Sbjct: 42 RFYLATFGCQMNEHDSEKLAGMLGEMGYSECEDMDESDLIIF-NTCCVRENAELKVYGHL 100
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAY 194
LK K+P I+ + GCM ++ + + I + VD++ G
Sbjct: 101 GAMKHLK-------------EKNPDMIIAMCGCMMQQPEVVEHIKKVYRQVDLIFGTHNL 147
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL K + ++ A+ P+ K+ V A+V+VM GCNN CS+CIVP
Sbjct: 148 YKFPELLFSAINSNKTVIDIMDSIGLIAEEMPIE-RKDEVKAWVTVMYGCNNFCSYCIVP 206
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+ RGRERSR +E+IV EV L ++G+KE+TLLGQNVNSY G +
Sbjct: 207 YVRGRERSRYIENIVDEVRMLGRQGLKEITLLGQNVNSYGKDLGNDT------------- 253
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FA LL L+ R R+ + HPKD DEL++ MRD VC+++HL
Sbjct: 254 ------------TFAKLLGELNEVEGIERIRFMTSHPKDLSDELIFAMRDLNKVCEHLHL 301
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y++E YL+L++K++ IP + L+SD I GF GETEE+ DTL +
Sbjct: 302 PFQSGSTRILKEMNRKYSKEDYLNLLEKVKINIPGISLTSDIIVGFPGETEEDFQDTLDV 361
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ +D Y F YS R T A ++ VD VPEEVK+ R L+E + + +
Sbjct: 362 VEKGRFDQIYSFLYSKRTGTPAAKS-VDQVPEEVKKERFQRLMEVQNRISNEINHEYLDK 420
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG + K D G++ V F
Sbjct: 421 EIEVLVEGES-KTNDKIYTGRTRENKIVNF 449
>gi|291287753|ref|YP_003504569.1| MiaB family RNA modification protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884913|gb|ADD68613.1| RNA modification enzyme, MiaB family [Denitrovibrio acetiphilus DSM
12809]
Length = 435
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 239/431 (55%), Gaps = 44/431 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ + T GCQMN D + ++ G++E + E + + +NTC++R+ +HK +
Sbjct: 3 KYFIHTMGCQMNEYDSLRIAAVFDKIGFTEAEEM-EEGDYLIVNTCSVREKPQHKAESAI 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPP-KIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
F +KR + P KI GC+A++ + +L +K +D V G D
Sbjct: 62 GRFRQIKR-------------RRPEVKIGFCGCVAQQEGENLLKTNKDIDFVVGTDGLHR 108
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
L ++ V+ G++ +T ++ DI +S V++FV++M+GCNN CS+CIVP+
Sbjct: 109 LEEVVAHVEAGERLSDTQVNEGGLEIDIFNREVS---VSSFVTIMKGCNNFCSYCIVPYV 165
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE+SR I+ E+ L +G +E+TLLGQNVNSY +P
Sbjct: 166 RGREKSREQSEIIDEIKYLADKGAREITLLGQNVNSYGTAL-----TDP----------- 209
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ F +LLD++S R R+ + HPKDF +EL+ +MR +C+Y+HLP
Sbjct: 210 ---------VSFPELLDKVSDVEGIKRIRFVTSHPKDFSNELIDVMRGNDKICEYLHLPL 260
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++AVL++M R YT + Y + V + +++IPD+ LSSDFI GF GETEE+ T+ ++
Sbjct: 261 QSGSNAVLQKMNRKYTYDHYKERVLRAKEMIPDLALSSDFIVGFPGETEEDFQSTMKALE 320
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
+ YDM Y F YS R T A ++ DDVP EVK+ RL +L++A + + + V
Sbjct: 321 EIRYDMIYAFNYSTRPGTKAE-SFNDDVPLEVKKMRLAKLLDAQKRIIAENSAAYQDLVV 379
Query: 497 LVLVEGPNKKA 507
V+VEG +KK
Sbjct: 380 EVMVEGESKKG 390
>gi|254251467|ref|ZP_04944785.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158]
gi|124894076|gb|EAY67956.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158]
Length = 457
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 248/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K ++ G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPDLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ TAFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRTSGRAQVDITFPEIEKFDHLPPARV--EGPTAFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ E+ L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEIAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGSS 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EIAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVNHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GET+++ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDLIVGFPGETDDDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P +VK +RL L E+ + S VG V
Sbjct: 328 HDMRYDTSFSFIYSPRPGTPA-ANLHDDTPRDVKLKRLQHLQATIEENVARISRSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|145633424|ref|ZP_01789154.1| lipoyl synthase [Haemophilus influenzae 3655]
gi|319774971|ref|YP_004137459.1| isopentenyl-adenosine A37 tRNA methylthiolase [Haemophilus
influenzae F3047]
gi|329123127|ref|ZP_08251697.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Haemophilus aegyptius
ATCC 11116]
gi|144985987|gb|EDJ92589.1| lipoyl synthase [Haemophilus influenzae 3655]
gi|317449562|emb|CBY85767.1| isopentenyl-adenosine A37 tRNA methylthiolase [Haemophilus
influenzae F3047]
gi|327471682|gb|EGF17124.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Haemophilus aegyptius
ATCC 11116]
Length = 474
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 247/448 (55%), Gaps = 40/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + ++ + E+ PE A+V+ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEAPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
W +E KKN +P ++ V GC+A + + I VD++ GP
Sbjct: 64 GR-W---KELKKN---------NPNLVIGVGGCVASQEGEHIRHRAPYVDIIFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP ++ ++ G+ + + E D P ++ TAFVS+M GCN C+FC+VP+T
Sbjct: 111 LPEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGP-TAFVSIMEGCNKYCTFCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y R
Sbjct: 170 RGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAY----------------RGPTHDG 213
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+C ++ LR +D + R R+T+ HP +F D+++ + RD P + ++HLP
Sbjct: 214 QICSFAEL-LRLVASIDGID------RLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPV 266
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G+ VL M+RG+T Y +++K+R + PD+ +SSDFI GF GET E+ T+ L+
Sbjct: 267 QAGSDRVLTMMKRGHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIA 326
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +DM++ F YS R T A + DDV E+ K++RL L E + Q +GT Q
Sbjct: 327 QVNFDMSFSFVYSARPGTPAA-DMPDDVTEDEKKQRLYVLQERINQQAAQFSRRMLGTEQ 385
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK EL G+++ V F
Sbjct: 386 RVLVEGPSKKDI-MELTGRTETNRIVNF 412
>gi|161523785|ref|YP_001578797.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
multivorans ATCC 17616]
gi|189351454|ref|YP_001947082.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
multivorans ATCC 17616]
gi|221200110|ref|ZP_03573153.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
CGD2M]
gi|221206737|ref|ZP_03579749.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
CGD2]
gi|421469879|ref|ZP_15918305.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
ATCC BAA-247]
gi|229890459|sp|A9AFF8.1|MIAB_BURM1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|160341214|gb|ABX14300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
ATCC 17616]
gi|189335476|dbj|BAG44546.1| bifunctional enzyme [Burkholderia multivorans ATCC 17616]
gi|221173392|gb|EEE05827.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
CGD2]
gi|221180349|gb|EEE12753.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
CGD2M]
gi|400228887|gb|EJO58777.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
ATCC BAA-247]
Length = 457
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 248/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDSPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K ++ G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPDLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ TAFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRTSGRAQVDITFPEIEKFDHLPPARV--EGPTAFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGSS 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EVAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVNHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETEE+ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDLIVGFPGETEEDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P +VK +RL + E+ + S VG V
Sbjct: 328 HDMRYDTSFSFIYSPRPGTPA-ANLHDDTPRDVKLKRLQLVQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|421474157|ref|ZP_15922216.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
CF2]
gi|400232740|gb|EJO62336.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia multivorans
CF2]
Length = 457
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 248/449 (55%), Gaps = 40/449 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y +T+GCQMN D + ++ ++ A E + PE+A++I NTC++R+ A+ KV+ L
Sbjct: 4 KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDSPEDADIILFNTCSVREKAQEKVFSDL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E K ++ G V GC+A + I+ VD+V GP L
Sbjct: 64 GRVRELK-EAKPDLLIG-----------VGGCVASQEGASIVSRAPYVDLVFGPQTLHRL 111
Query: 198 PRLLE-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P++++ G+ ++ E + + P R+ TAFVS+M GC+ CS+C+VP+T
Sbjct: 112 PQMIDARRTSGRAQVDITFPEIEKFDHLPPARV--EGPTAFVSIMEGCSKYCSYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ EV L +GV+EVTLLGQNVN+Y GA L+ G +
Sbjct: 170 RGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYR-----------GA---LTAGSS 215
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
+ FA L++ ++ + P + R RYT+ HPK+F L+ P + ++HLP
Sbjct: 216 EVAD-------FATLIEYVA-DIPGIERIRYTTSHPKEFTQRLIDTYAKVPKLVNHLHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y +++K+R I PD+ LS+D I GF GETEE+ + L+
Sbjct: 268 VQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPDLSLSTDLIVGFPGETEEDFDKMMALV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ YD ++ F YS R T A N DD P +VK +RL + E+ + S VG V
Sbjct: 328 HDMRYDTSFSFIYSPRPGTPAA-NLHDDTPRDVKLKRLQLVQATIEENVARISQSMVGKV 386
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ +LVEGP++K P+ EL G+++ V F
Sbjct: 387 ERILVEGPSRKDPN-ELAGRTENNRVVNF 414
>gi|385799932|ref|YP_005836336.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halanaerobium praevalens
DSM 2228]
gi|309389296|gb|ADO77176.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halanaerobium praevalens
DSM 2228]
Length = 443
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/430 (37%), Positives = 245/430 (56%), Gaps = 46/430 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E + +++ GY + ENA++I +NTC IR+ AE KV+ +L
Sbjct: 11 TYGCQMNKHDSERLAGMLEEMGYQPT-DKYENADIILLNTCIIRENAELKVFGKLGELKR 69
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMAERLK--DKILDADKMVDVVCGPDAYRDLPR 199
KRE +P I+ + GCM ++ + D++ + VD++ G LP
Sbjct: 70 YKRE-------------NPDLIIGIGGCMMQQDEPVDEVYKKYRHVDLIFGTHNIHHLPD 116
Query: 200 LLEEVDYGQKGINTLLSLEE-TYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRG 258
L+ +++ + + + EE D+ R S++S A++S+++GC+N C++CIVP+ RG
Sbjct: 117 LINKIEKTRDRVVEVWDEEEGLIPDLPSQRKSEHS--AWISIIQGCDNFCTYCIVPYVRG 174
Query: 259 RERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSM 318
RERSRP+ SIVKE ++L +GVKE+TLLGQNVNSY + +EKE
Sbjct: 175 RERSRPLTSIVKEAEKLAADGVKEITLLGQNVNSYGND--LEKET--------------- 217
Query: 319 CKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
F LL L+ R R+ + HP+DF DELL + + V +IHLP Q+
Sbjct: 218 --------TFPKLLAELNKVQKLKRIRFMTSHPRDFSDELLEKIAELDKVANHIHLPIQS 269
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G++ VL++M RGYTRE Y++ V+KIR+ +P +S+DFI GF GETE + T+ L+K +
Sbjct: 270 GSNKVLKQMNRGYTREYYIERVEKIRKEMPHASVSTDFIVGFPGETEADFEQTINLVKEL 329
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
+DMAY F YS R T A + D + EEVK++RL L++ + + +G+ Q V
Sbjct: 330 NFDMAYTFIYSPRSGTPA-ASRKDQIDEEVKKKRLKTLMDLQNKISYDKNQKLIGSTQEV 388
Query: 499 LVEGPNKKAP 508
LV G + P
Sbjct: 389 LVTGASDSNP 398
>gi|399070228|ref|ZP_10749703.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Caulobacter sp. AP07]
gi|398044434|gb|EJL37253.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Caulobacter sp. AP07]
Length = 450
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 234/443 (52%), Gaps = 44/443 (9%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q R+Y +TYGCQMNV D E + +++ GY V++ PE A+++ +NTC IR+ A KV+
Sbjct: 6 QKRLYIKTYGCQMNVYDSERMADVLRPLGYG-VVDDPEGADLVVLNTCHIREKATEKVYS 64
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L Y K + T ++Q+ I V GC+A+ +I+ VD+V GP AY
Sbjct: 65 ELGYI--------KQMKTRKAQAGGTMTIAVAGCVAQAEGKEIMHRQPAVDLVVGPQAYH 116
Query: 196 DLPRLLEEVD--YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
LP L+ G++ ++ + +E + D P N VTAF++V GC+ C+FC+V
Sbjct: 117 QLPELIARAHRATGER-LSADFAADEKF-DALPAERQVNGVTAFLTVQEGCDKFCTFCVV 174
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRG E SRP ESI E L +GV+EVTLLGQNVN+Y+ G + L+
Sbjct: 175 PYTRGGEWSRPPESIEDEAKRLADQGVREVTLLGQNVNAYD-----------GGGYTLAR 223
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
+ K+ LDR+ RYT+ HP+D D+L+ + P + Y+H
Sbjct: 224 LVRRLAKIPG--------LDRI---------RYTTSHPRDMGDDLIAAHAELPELMPYLH 266
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q G+ +L+ M R +T E+Y+ L++KIR PD+ +S DFI GF GE + + TL
Sbjct: 267 LPVQAGSDKILKAMNRDHTAESYVRLIEKIRAGRPDIAMSGDFIVGFPGERDGDFEKTLE 326
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
L++ VG+ A+ F YS R T A V E VK RL L E QVG
Sbjct: 327 LVREVGFASAFSFKYSRRPGTPAS-AMPGQVDEAVKAERLDRLNILLDEQQKAFNALQVG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKS 516
V VL E K ++VG+S
Sbjct: 386 KVMPVLFE--KKGRNPGQIVGRS 406
>gi|423604599|ref|ZP_17580492.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD102]
gi|401245219|gb|EJR51577.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus VD102]
Length = 509
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EEADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKALKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNNRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|403234719|ref|ZP_10913305.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus sp.
10403023]
Length = 509
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 255/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R TYGCQMN +D E++ I GY N ++A++I +NTCAIR+ AE+KV+ +
Sbjct: 67 RFLIRTYGCQMNEHDTEVMAGIFMEMGYEPTENT-KDADIILLNTCAIRENAENKVFGEI 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYR 195
+ LK E N+ G V GCM+ E + +KIL+ + VD++ G
Sbjct: 126 GHLKPLKLE-NPNLLIG-----------VCGCMSQEESVVNKILEKHQFVDMIFGTHNIH 173
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP +++E + ++ + + S E + P ++ K ++ +V++M GC+ C++CIVP+
Sbjct: 174 RLPYIVKEAMFSKEMVVEVWSKEGDIIENLP-KVRKGNIKGWVNIMYGCDKFCTYCIVPY 232
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG+ERSR + I++EV L ++G +E+TLLGQNVN+Y + F
Sbjct: 233 TRGKERSRRPKDIIEEVRHLARQGYQEITLLGQNVNAY------------------GKDF 274
Query: 316 NSMCKVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ K GL DL+D L ++ P R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 275 TDI----KYGL--GDLMDELRKIDIP--RIRFTTSHPRDFDDHLIDVLAKGGNLMEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+S VL+ M R YTRE+YL+LV+K+++ IP+ ++D I GF ET+E+ +TL+L
Sbjct: 327 PVQSGSSQVLKLMSRKYTRESYLELVRKMKERIPNASFTTDIIVGFPNETDEQFEETLSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A + D++ EVK+ RL L E + + +
Sbjct: 387 YREVEFDSAYTFIYSPREGTPAAK-MEDNISMEVKKERLQRLNALVNEISAKKNLAYQDQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLVEG +K PD L G + + V F
Sbjct: 446 IVEVLVEGESKNNPDV-LAGYTSKNKLVNF 474
>gi|42782856|ref|NP_980103.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cereus ATCC 10987]
gi|81409496|sp|Q732V4.1|MIAB_BACC1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|42738783|gb|AAS42711.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 509
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EEADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKALKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNNRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
>gi|383760090|ref|YP_005439076.1| tRNA-i(6)A37 modification enzyme MiaB [Rubrivivax gelatinosus
IL144]
gi|381380760|dbj|BAL97577.1| tRNA-i(6)A37 modification enzyme MiaB [Rubrivivax gelatinosus
IL144]
Length = 444
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 240/449 (53%), Gaps = 43/449 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y T+GCQMN D + ++ AG E + PE A+++ NTC++R+ A+ KV+ L
Sbjct: 3 KVYIRTFGCQMNEYDSAKMADVLNAAGGYEPTDDPEQADLVLFNTCSVREKAQEKVFSDL 62
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK KK V G V GC+A + I++ VD+V GP L
Sbjct: 63 GRVKHLK---KKGVLIG-----------VGGCVASQEGAAIIERAPYVDMVFGPQTLHRL 108
Query: 198 PRLLEEVDYGQK-GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+++ ++ ++ E + + P R+ S AFVS+M GC+ C++C+VP+T
Sbjct: 109 PQMIAARSAERRPQVDISFPEIEKFDHLPPPRVEGAS--AFVSIMEGCSKYCTYCVVPYT 166
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP E ++ EV +L GVKEVTLLGQNVN+Y G E+
Sbjct: 167 RGEEVSRPFEDVLTEVADLADRGVKEVTLLGQNVNAYRGAMGESGEIA------------ 214
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
A LL+ ++ E P + R R+T+ HP +F L+ P + ++HLP
Sbjct: 215 ----------DLALLLEYVA-EVPGIERIRFTTSHPNEFTQRLIEAYGRIPKLVSHLHLP 263
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q G+ +L M+RGYT Y ++K+R+ P + LSSDFI GF GETE++ + T+ L+
Sbjct: 264 VQHGSDRILSAMKRGYTALEYKSTIRKLREQRPGISLSSDFIVGFPGETEDDFSKTMKLI 323
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ VGYD ++ F YS R T A DD P+E+K RL L A + + S+VGT
Sbjct: 324 EDVGYDASFSFVYSQRPGTPAA-ALDDDTPQELKLVRLQTLQAAIEANVRRISASRVGTR 382
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LVEGP+KK P EL+G+++ V F
Sbjct: 383 QTILVEGPSKKNPQ-ELMGRTECNRIVNF 410
>gi|387771045|ref|ZP_10127217.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pasteurella bettyae CCUG
2042]
gi|386902964|gb|EIJ67785.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pasteurella bettyae CCUG
2042]
Length = 474
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/448 (34%), Positives = 249/448 (55%), Gaps = 40/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ +T+GCQMN D + ++++ E+ +PE A+V+ +NTC+IR+ A+ KV+ +L
Sbjct: 4 KLHIKTWGCQMNEYDSSKMADLLESTHGLELTEIPEEADVLLLNTCSIREKAQEKVFHQL 63
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ LK+ K+P ++ V GC+A + + I VD++ GP
Sbjct: 64 GRWKELKK-------------KNPNLLIGVGGCVASQEGEHIRQRAPFVDIIFGPQTLHR 110
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP ++ ++ GQ + + E D P ++ TAFVS+M GCN C++C+VP+T
Sbjct: 111 LPAMINQIRGGQSSVVDVSFPEIEKFDCLPEPKAEGP-TAFVSIMEGCNKYCTYCVVPYT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RG E SRP++ ++ E+ +L +GV+EV LLGQNVN+Y G +
Sbjct: 170 RGEEVSRPLDDVLFEIAQLAAQGVREVNLLGQNVNAYR-----------GPTFD-----G 213
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+C ++ LR +D + R R+T+ +P +F D+++ + RD P + ++HLP
Sbjct: 214 GICSFAEL-LRLVAAIDGID------RLRFTTSNPLEFTDDIIDVYRDTPELVSFLHLPV 266
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G+ +L M+RG+T Y +++K+R + P++ +SSDFI GF GET EE T+ L++
Sbjct: 267 QAGSDRILTMMKRGHTAIEYKSIIRKLRAVRPNIQISSDFIVGFPGETNEEFEQTMNLIQ 326
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +DM+Y F YS R T A + DDV EE K++RL L + Q + +GT Q
Sbjct: 327 QVNFDMSYSFVYSARPGTPAA-DMPDDVTEEEKKQRLYLLQQRINNQALQFSRAMLGTEQ 385
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK EL G+++ V F
Sbjct: 386 RVLVEGPSKKDI-MELTGRTENNRIVNF 412
>gi|402306988|ref|ZP_10826021.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus sputorum HK
2154]
gi|400373832|gb|EJP26759.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Haemophilus sputorum HK
2154]
Length = 475
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 248/450 (55%), Gaps = 42/450 (9%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
+++ T+GCQMN D + ++ E+ PE A+V+ +NTC+IR+ A+ KV+ +
Sbjct: 2 AKLHITTWGCQMNEYDSSKMADLLLATHGLELTENPEEADVLLLNTCSIREKAQEKVFSQ 61
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYR 195
L W + WKK+ P I+ V GC+A + + I D VD+V GP
Sbjct: 62 LGR-W---KNWKKD---------KPELIIGVGGCVASQEGEHIRDRAPFVDIVFGPQTLH 108
Query: 196 DLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP ++ ++ G + I + E D P ++ TAFVS+M GCN CSFC+VP+
Sbjct: 109 RLPEMINKIRGGDRAIVDISFPEIEKFDRLPEPKAEGP-TAFVSIMEGCNKYCSFCVVPY 167
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRG E SRPV+ ++ E+ +L ++GV+EV LLGQNVN+Y + F
Sbjct: 168 TRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYR-----------------GDTF 210
Query: 316 NS-MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
+ +C ++ LR +D + R RYT+ HP +F D+++ + RD P + ++HL
Sbjct: 211 DGQICSFAEL-LRLVAAIDGID------RVRYTTSHPIEFTDDIVEVYRDTPELVSFLHL 263
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ VL M+R +T Y +++K+R++ P++ +SSDFI GF GET E+ T+ +
Sbjct: 264 PIQSGSDRVLTMMKRNHTALEYKAIIRKLREVRPNIQISSDFIVGFPGETAEDFEQTMKV 323
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
++ V +DM++ F YS R T A + DDV EE K+ RL L + Q + +GT
Sbjct: 324 IEQVNFDMSFSFIYSARPGTPAS-DLPDDVSEEEKKERLARLQQRINFQAMQFSRAMLGT 382
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
Q +LVEGP+KK EL G+++ V F
Sbjct: 383 EQRILVEGPSKKDI-MELTGRTENNRVVNF 411
>gi|389690677|ref|ZP_10179570.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Microvirga sp. WSM3557]
gi|388588920|gb|EIM29209.1| tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
[Microvirga sp. WSM3557]
Length = 452
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/445 (37%), Positives = 242/445 (54%), Gaps = 45/445 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ++YGCQMNV D E + ++ GYSE + E A+++ +NTC IR+ A KV+ L
Sbjct: 3 KVFVKSYGCQMNVYDAERMADMLATEGYSETKAM-EEADLVILNTCHIREKAAEKVYSEL 61
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK+E R S K+VV GC+A+ +IL VDVV GP Y +L
Sbjct: 62 GRVRELKKE--------REASGQETKVVVAGCVAQAEGKEILRRAPAVDVVVGPQNYHNL 113
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADI---SPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL + ++ ++T +E+ + + S R V+AF+++ GC+ C+FC+VP
Sbjct: 114 PALLNK-SRSERVVDTEFPIEDKFDHLPAPSKARTRSRGVSAFLTIQEGCDKFCTFCVVP 172
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRPV I+ E L GV+E+TL+GQNVN+Y+ E G+ W L
Sbjct: 173 YTRGAEVSRPVAKILDEALRLADAGVRELTLIGQNVNAYHG------EGPDGSVWSLGR- 225
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEM-RFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
LL RL+ E P + R RYT+ HP+D DEL+ RD P V Y+H
Sbjct: 226 ----------------LLHRLA-EVPGIARLRYTTSHPRDMDDELIAAHRDLPAVMPYLH 268
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G+ +L+ M R +T + Y L+++IR+ P + LSSDFI GF GET+ E +T+
Sbjct: 269 LPVQSGSDRILDVMNRKHTGDEYRRLIERIRKAQPRLALSSDFIVGFPGETDAEFEETMR 328
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVD-DVPEEVKQRRLTELIEAFRESTGQCYD-SQ 491
L+ VG+ ++ F YS R T A +D VPE VK RL L + E Q ++
Sbjct: 329 LVADVGFASSFSFKYSPRPGTPAAE--IDAQVPEPVKAERLARL-QNLLEIQRQAFNHGT 385
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKS 516
VG VL+E P + ++ GKS
Sbjct: 386 VGQTLDVLLEKPGRHP--GQMAGKS 408
>gi|206977875|ref|ZP_03238763.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus H3081.97]
gi|217961193|ref|YP_002339761.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cereus AH187]
gi|222097218|ref|YP_002531275.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
cereus Q1]
gi|229140413|ref|ZP_04268968.1| hypothetical protein bcere0013_35120 [Bacillus cereus BDRD-ST26]
gi|229197883|ref|ZP_04324599.1| hypothetical protein bcere0001_34190 [Bacillus cereus m1293]
gi|375285694|ref|YP_005106133.1| hypothetical protein BCN_3600 [Bacillus cereus NC7401]
gi|384181582|ref|YP_005567344.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|423353474|ref|ZP_17331101.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus IS075]
gi|423374431|ref|ZP_17351769.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus AND1407]
gi|423567333|ref|ZP_17543580.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus MSX-A12]
gi|423574621|ref|ZP_17550740.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus MSX-D12]
gi|229890422|sp|B7HLA6.1|MIAB_BACC7 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|206743875|gb|EDZ55294.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus H3081.97]
gi|217064945|gb|ACJ79195.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Bacillus cereus AH187]
gi|221241276|gb|ACM13986.1| conserved hypothetical protein [Bacillus cereus Q1]
gi|228585601|gb|EEK43703.1| hypothetical protein bcere0001_34190 [Bacillus cereus m1293]
gi|228642974|gb|EEK99250.1| hypothetical protein bcere0013_35120 [Bacillus cereus BDRD-ST26]
gi|324327666|gb|ADY22926.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|358354221|dbj|BAL19393.1| conserved hypothetical protein [Bacillus cereus NC7401]
gi|401089287|gb|EJP97458.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus IS075]
gi|401094343|gb|EJQ02425.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus AND1407]
gi|401212146|gb|EJR18892.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus MSX-D12]
gi|401214421|gb|EJR21151.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Bacillus
cereus MSX-A12]
Length = 509
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 253/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY + E A+V+ +NTCAIR+ AE+KV+ L
Sbjct: 67 KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFST-EEADVVLLNTCAIRENAENKVFGEL 125
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
+ LKR ++P ++ V GCM+ E + +KI+ ++ VD+V G
Sbjct: 126 GHLKALKR-------------RNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNI 172
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L++ + ++ + + S E + P ++ + + A+V++M GC+ C++CIVP
Sbjct: 173 HRLPYILKDAMFSKETVVEVWSKEGDVIENLP-KVRRGDIKAWVNIMYGCDKFCTYCIVP 231
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++E+ L G KE+TLLGQNVN+Y +++E G
Sbjct: 232 YTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDF---EDIEYG-------- 280
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
DL+D L + R R+T+ HP+DF D L+ ++ N+ ++IHL
Sbjct: 281 -------------LGDLMDELR-KVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHL 326
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R Y+RE YL+LV+KI++ IP+ L++D I GF ET+E+ +T++L
Sbjct: 327 PVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSL 386
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ VG+D A+ F YS RE T A + D+VP EVK+ RL L + + + G
Sbjct: 387 YREVGFDTAFTFIYSPREGTPAAK-MKDNVPMEVKKERLQRLNALVNKLAIEKNNRYKGQ 445
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ VLV+G +K P+ L G + V F
Sbjct: 446 IVEVLVDGESKNNPEV-LAGYTRTNKLVNF 474
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,237,989,873
Number of Sequences: 23463169
Number of extensions: 342092914
Number of successful extensions: 879942
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8229
Number of HSP's successfully gapped in prelim test: 538
Number of HSP's that attempted gapping in prelim test: 844295
Number of HSP's gapped (non-prelim): 10791
length of query: 524
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 377
effective length of database: 8,910,109,524
effective search space: 3359111290548
effective search space used: 3359111290548
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)