BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041524
(524 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H0V1|CK5P1_ARATH CDK5RAP1-like protein OS=Arabidopsis thaliana GN=At4g36390 PE=2
SV=1
Length = 640
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/530 (75%), Positives = 457/530 (86%), Gaps = 15/530 (2%)
Query: 3 LDPRC---ARRLTTRQL--KRSFSLNLSRNFSHSSLDLP---DGPGLHHFIAQSSLTASQ 54
L PRC RLT + + K+ FSLNLSR+FS S + DGP LH F++ + AS
Sbjct: 51 LLPRCRSSTHRLTQKPINRKKGFSLNLSRSFSISQIASSGKFDGPSLHQFVSNAQAHASL 110
Query: 55 PLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPEN 114
P +E S S++ S+GRIY ETYGCQMN+NDMEIVL+IMKN+GY EV+ PE+
Sbjct: 111 T----TPETESESTLDSDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPES 166
Query: 115 AEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERL 174
AEVIF+NTCAIR+ AE +VWQRLNYFWFLKREWK N ATGR++S PPK+VVLGCMAERL
Sbjct: 167 AEVIFVNTCAIRENAEQRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERL 226
Query: 175 KDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSV 234
KDKILD+DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRIS+NS+
Sbjct: 227 KDKILDSDKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENSI 286
Query: 235 TAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN 294
TAFVSVMRGCNNMC+FCIVPFTRGRERSRPVESI++EV ELW+ GVKEVTLLGQNVNSYN
Sbjct: 287 TAFVSVMRGCNNMCAFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYN 346
Query: 295 DTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDF 354
D S + E GANW SEGF+S CKVK MGLRFADLLDRLS+EFPEMRFR+TSPHPKD+
Sbjct: 347 DDSA---DRESGANWEYSEGFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDY 403
Query: 355 PDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSS 414
PDELLY+MRDR N+C IHLPAQ+GNS +LE+MRRGYTREAYLDLV+KIR IIPDV ++S
Sbjct: 404 PDELLYLMRDRHNICNLIHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITS 463
Query: 415 DFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLT 474
DFI GFCGETEEEH +TL+L++AVGYDMAYMFAYSMRE+THAHRNY DDVPEEVKQRRLT
Sbjct: 464 DFITGFCGETEEEHQETLSLVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLT 523
Query: 475 ELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
ELI+AFRE+TG CYDSQVG+ QLVLVEGPNK+AP+TEL+GK+D+GHRV+F
Sbjct: 524 ELIDAFRETTGPCYDSQVGSTQLVLVEGPNKRAPETELIGKTDKGHRVSF 573
>sp|Q2R1U4|CK5P1_ORYSJ CDK5RAP1-like protein OS=Oryza sativa subsp. japonica
GN=Os11g0592800 PE=2 SV=1
Length = 600
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/477 (81%), Positives = 432/477 (90%), Gaps = 7/477 (1%)
Query: 53 SQPLADLAPASEVSSA-----TGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSE 107
S+PLA A A+ VS A +G S+GRIY ETYGCQMNVNDMEIVLSIMKN GY E
Sbjct: 65 SRPLAASA-ATAVSEAQTDLESGPVTASKGRIYHETYGCQMNVNDMEIVLSIMKNEGYDE 123
Query: 108 VINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVL 167
++ PE+AE+IFINTCAIRD AE KVWQRLNYFWFLKR+WK NVA GRS+S PPKI VL
Sbjct: 124 IVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKANVAAGRSRSLRPPKIAVL 183
Query: 168 GCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPV 227
GCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLL+EVDYGQKGINTLLSLEETYADI+PV
Sbjct: 184 GCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADITPV 243
Query: 228 RISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLG 287
RIS NSVTAFVS+MRGCNNMCSFCIVPFTRGRERSRPV SIV+EV ELWK GVKEV LLG
Sbjct: 244 RISDNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWKAGVKEVMLLG 303
Query: 288 QNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYT 347
QNVNSYNDTS +E E+EPG NW LSEGF+SMCKVK MGLRFADLLD+LSLE+PEMRFR+T
Sbjct: 304 QNVNSYNDTSEVE-ELEPGKNWELSEGFSSMCKVKNMGLRFADLLDQLSLEYPEMRFRFT 362
Query: 348 SPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQII 407
SPHPKD+PDELLY+MRDR NVCK IH+PAQ+G+SAVLERMRRGYTREAYL+LVQKIR II
Sbjct: 363 SPHPKDYPDELLYLMRDRHNVCKLIHMPAQSGSSAVLERMRRGYTREAYLELVQKIRSII 422
Query: 408 PDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEE 467
PDVGLSSDFI GFCGETEEEHA+TLTL++AVGYDMAYMFAYSMRE+THAHRNYVDDVP++
Sbjct: 423 PDVGLSSDFISGFCGETEEEHAETLTLVRAVGYDMAYMFAYSMREKTHAHRNYVDDVPDD 482
Query: 468 VKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VKQRRL ELI FRE+T + YDSQVGTVQLVLVEGPNK+AP+TE++GK+DRGHRV+F
Sbjct: 483 VKQRRLAELISTFRETTAKIYDSQVGTVQLVLVEGPNKRAPETEMIGKTDRGHRVSF 539
>sp|Q9JLH6|CK5P1_RAT CDK5 regulatory subunit-associated protein 1 OS=Rattus norvegicus
GN=Cdk5rap1 PE=1 SV=1
Length = 586
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/495 (53%), Positives = 350/495 (70%), Gaps = 22/495 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQP----LADLAPASEVSSATGSEVHS-QGRIYQETYGCQMN 89
L GP HF+ +S+ +P + D P +G E+ Q ++Y ETYGCQMN
Sbjct: 55 LATGPTFQHFLRSASVPQEKPSSPEVEDPPPY-----LSGDELLGRQRKVYLETYGCQMN 109
Query: 90 VNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKK 149
VND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK +
Sbjct: 110 VNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKVLKAK--- 165
Query: 150 NVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQK 209
R +S+ P +I +LGCMAERLK +IL+ +KMVD++ GPDAYRDLPRLL V+ GQ+
Sbjct: 166 -----RPRSRVPLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDLPRLLAVVESGQQ 220
Query: 210 GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI+
Sbjct: 221 AANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASIL 280
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
EV +L ++G+KEVTLLGQNVNS+ D S ++ AN LS GF + K K+ GLRF+
Sbjct: 281 DEVRKLSEQGLKEVTLLGQNVNSFRDNSEVQFSSTGSAN--LSRGFTTNYKPKQGGLRFS 338
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
LLD++S PEMR R+TSPHPKDFPDE+L ++R+R N+CK IHLPAQ+G+S VLE MRR
Sbjct: 339 HLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQSGSSRVLEAMRR 398
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GY+REAY+ LV IR+ IP VGLSSDFI GFCGETE++H T++L++ V Y+ ++FAYS
Sbjct: 399 GYSREAYVALVHHIREAIPGVGLSSDFITGFCGETEDDHLQTVSLLREVQYNTGFLFAYS 458
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MR++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++
Sbjct: 459 MRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEASKVNATSVGCTQLVLVEGFSKRS-T 517
Query: 510 TELVGKSDRGHRVAF 524
T+L G++D +V F
Sbjct: 518 TDLCGRNDANLKVIF 532
>sp|Q8BTW8|CK5P1_MOUSE CDK5 regulatory subunit-associated protein 1 OS=Mus musculus
GN=Cdk5rap1 PE=2 SV=2
Length = 588
Score = 516 bits (1329), Expect = e-145, Method: Compositional matrix adjust.
Identities = 264/495 (53%), Positives = 349/495 (70%), Gaps = 22/495 (4%)
Query: 35 LPDGPGLHHFIAQSSLTASQP----LADLAPASEVSSATGSEVHS-QGRIYQETYGCQMN 89
L GP HF+ +S+ +P + D P +G E+ Q ++Y ETYGCQMN
Sbjct: 57 LATGPTFQHFLRSASVPQEKPSSPEVEDPPPY-----LSGDELLGRQRKVYLETYGCQMN 111
Query: 90 VNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKK 149
VND EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 112 VNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKVLK----- 165
Query: 150 NVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQK 209
T R +S+ P +I +LGCMAERLK +IL+ +KMVD++ GPDAYRDLPRLL V+ GQ+
Sbjct: 166 ---TKRPRSRVPLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDLPRLLAVVESGQQ 222
Query: 210 GINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIV 269
N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI+
Sbjct: 223 AANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASIL 282
Query: 270 KEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFA 329
EV +L ++G+KEVTLLGQNVNS+ D S ++ AN LS GF + K K+ GLRF+
Sbjct: 283 DEVRKLSEQGLKEVTLLGQNVNSFRDNSEVQFNNAGSAN--LSRGFTTNYKPKQGGLRFS 340
Query: 330 DLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRR 389
LLD++S PEMR R+TSPHPKDFPDE+L ++R+R N+CK IHLPAQ+G+S VL+ MRR
Sbjct: 341 HLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQSGSSRVLDAMRR 400
Query: 390 GYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYS 449
GY+REAY+ LV +R+ IP V LSSDFI GFCGETE++H T++L++ V Y+ ++FAYS
Sbjct: 401 GYSREAYVALVHHVRETIPGVSLSSDFITGFCGETEDDHRQTVSLLREVQYNTGFLFAYS 460
Query: 450 MRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPD 509
MR++T A+ DDVPEEVK RRL ELI FRE + + VG QLVLVEG +K++
Sbjct: 461 MRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEASKANKTSVGCSQLVLVEGFSKRS-T 519
Query: 510 TELVGKSDRGHRVAF 524
T+L G++D +V F
Sbjct: 520 TDLCGRNDANLKVIF 534
>sp|Q96SZ6|CK5P1_HUMAN CDK5 regulatory subunit-associated protein 1 OS=Homo sapiens
GN=CDK5RAP1 PE=1 SV=2
Length = 601
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/507 (51%), Positives = 345/507 (68%), Gaps = 33/507 (6%)
Query: 35 LPDGPGLHHFIAQSSLTA---SQPLADLAPASEVSSATGSEVHSQGRIYQETYGCQMNVN 91
L GP HF+ +S S + D P + G Q ++Y ETYGCQMNVN
Sbjct: 59 LAAGPTFQHFLKSASAPQEKLSSEVEDPPPYLMMDELLGR----QRKVYLETYGCQMNVN 114
Query: 92 DMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNV 151
D EI SI++ +GY N+ E A+VI + TC+IR+ AE +W RL+ LK
Sbjct: 115 DTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKALK------- 166
Query: 152 ATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGI 211
T R +S+ P +I +LGCMAERLK++IL+ +KMVD++ GPDAYRDLPRLL + GQ+
Sbjct: 167 -TRRPRSRVPLRIGILGCMAERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAA 225
Query: 212 NTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 271
N LLSL+ETYAD+ PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRP+ SI++E
Sbjct: 226 NVLLSLDETYADVMPVQTSASATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPIASILEE 285
Query: 272 VDELWKE--------------GVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
V +L ++ G+KEVTLLGQNVNS+ D S E + LS GF +
Sbjct: 286 VKKLSEQVFLPPRPPKVLGLQGLKEVTLLGQNVNSFRDNS--EVQFNSAVPTNLSRGFTT 343
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
K K+ GLRFA LLD++S PEMR R+TSPHPKDFPDE+L ++ +R N+CK IHLPAQ
Sbjct: 344 NYKTKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQ 403
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S VLE MRRGY+REAY++LV IR+ IP V LSSDFI GFCGETEE+H T++L++
Sbjct: 404 SGSSRVLEAMRRGYSREAYVELVHHIRESIPGVSLSSDFIAGFCGETEEDHVQTVSLLRE 463
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V Y+M ++FAYSMR++T A+ DDVPEEVK RRL ELI FRE + + VG QL
Sbjct: 464 VQYNMGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQL 523
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEG +K++ T+L G++D +V F
Sbjct: 524 VLVEGLSKRSA-TDLCGRNDGNLKVIF 549
>sp|Q9VGZ1|CK5P1_DROME CDK5RAP1-like protein OS=Drosophila melanogaster GN=CG6345 PE=2
SV=1
Length = 583
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/487 (51%), Positives = 334/487 (68%), Gaps = 14/487 (2%)
Query: 38 GPGLHHFIAQSSLTASQPLADLAPASEVSSATGSEVHSQGR-IYQETYGCQMNVNDMEIV 96
GPG F A + + + + V + + GR ++ E YGCQMN ND E+V
Sbjct: 52 GPGFQDFFAVKPASRLKTDEEEHVDTSVPYLNSIDFNGNGRKVHFEVYGCQMNTNDTEVV 111
Query: 97 LSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRS 156
SI+K GY PE A+VI + TCA+RD AE ++ RL + +K + RS
Sbjct: 112 FSILKENGYLRC-QEPEEADVIMLVTCAVRDGAEQRIRNRLKHLRAMKNK--------RS 162
Query: 157 QSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE-EVDYGQKGINTLL 215
+HP ++ +LGCMAERLK+K+L+ ++ VDV+ GPD+Y+DLPRLL YG IN LL
Sbjct: 163 TRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDLPRLLAISRHYGNSAINVLL 222
Query: 216 SLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEVDEL 275
SL+ETYAD+ PVR++ S TAFVS+MRGC+NMC++CIVPFTRGRERSRP+ SIV EV L
Sbjct: 223 SLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFTRGRERSRPLASIVAEVKAL 282
Query: 276 WKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRL 335
++GVKEVTLLGQNVNSY D + E++ A GF+++ K K G FA LL +
Sbjct: 283 AEQGVKEVTLLGQNVNSYRDRTAQEEQDSLKATP--VPGFSTVYKPKTGGTPFAALLRSV 340
Query: 336 SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREA 395
+ P+MR R+TSPHPKDF DE+L ++RD PNVCK +HLPAQ+GN+ VLERMRRGY+REA
Sbjct: 341 AQAVPDMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREA 400
Query: 396 YLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTH 455
YL+LVQ IRQ +P+VGLSSDFICGFCGETEEE DT++L++ V Y++AY+FAYSMRE+T
Sbjct: 401 YLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTT 460
Query: 456 AHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGK 515
AHR Y DDVP VK RL +++ FRE Q + G QL+L+EG +K++ D G+
Sbjct: 461 AHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQEQLILIEGKSKRS-DAHWFGR 519
Query: 516 SDRGHRV 522
+D +V
Sbjct: 520 NDANIKV 526
>sp|Q54KV4|CK5P1_DICDI CDK5RAP1-like protein OS=Dictyostelium discoideum GN=cdk5rap1 PE=3
SV=1
Length = 607
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/462 (48%), Positives = 330/462 (71%), Gaps = 33/462 (7%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ETYGCQMNV+D E++ SIMK++GY+ + N A+++F+NTC+IR+ AE K+W RL
Sbjct: 108 KVWIETYGCQMNVSDEEVICSIMKSSGYT-ISNDFNTADIVFLNTCSIRENAEAKIWLRL 166
Query: 138 NYFWFLKR-EWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
++R + + N+ G VLGCMAERLK+K+L++D VD+V GPDAYR
Sbjct: 167 TELRAIRRKQGRPNLIVG-----------VLGCMAERLKEKLLESDMKVDIVVGPDAYRS 215
Query: 197 LPRLLEEVDYG--QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP LL ++ G Q IN +LS +ETYADI PVR S N V+A+VS+MRGCNNMCS+CIVP
Sbjct: 216 LPSLLATLEDGEQQTAINVILSADETYADIKPVRKSDNQVSAYVSIMRGCNNMCSYCIVP 275
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYN--------------DTSGME 300
FTRGRERSRP++SI++EV +L +G KE+TLLGQNVNS+N DT +
Sbjct: 276 FTRGRERSRPIDSILREVKDLSDQGFKEITLLGQNVNSFNYYEESNNNNNENFIDTQKNK 335
Query: 301 KEVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLY 360
E+E + + EGF ++ K K G+ F L++ +S PE+R R+TSPHPKDFPD+LL
Sbjct: 336 LELE---SLKPREGFKTIYKSPKKGITFTKLMELVSKVDPEIRIRFTSPHPKDFPDDLLE 392
Query: 361 IMRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGF 420
+++++PN+CK +H+PAQ+G+S VLE MRRGYTRE+Y++L+ I++++P +SSDFI GF
Sbjct: 393 LIKNQPNICKQLHIPAQSGSSKVLESMRRGYTRESYIELIDTIKRVLPGCAISSDFISGF 452
Query: 421 CGETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAF 480
CGE++++H +T++LM+ VGY+ A+MF YS+RE+THAHR DDVP +K RLT++++ F
Sbjct: 453 CGESDQDHNETISLMEYVGYENAFMFMYSLREKTHAHRQLKDDVPTTLKNSRLTQVVDTF 512
Query: 481 RESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRV 522
+ + ++G LVLV+G +K++ + + VG++D +V
Sbjct: 513 YKRLKEKNQLEIGNHHLVLVDGFSKRS-EKDFVGRTDTNKKV 553
>sp|Q09316|CK5P1_CAEEL CDK5RAP1-like protein OS=Caenorhabditis elegans GN=F25B5.5 PE=3
SV=1
Length = 547
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/493 (47%), Positives = 319/493 (64%), Gaps = 23/493 (4%)
Query: 37 DGPGLHHFIAQSSLTASQPLADLAPASEVSSA--TGSEVHSQGR-IYQETYGCQMNVNDM 93
DG L FI +S T Q + P+ E + ++ GR + TYGCQMNV+DM
Sbjct: 38 DGLQLSDFIKES--TKKQRQKAIIPSIEDTKEYLNPEDLQGNGRTVCYVTYGCQMNVSDM 95
Query: 94 EIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWFLKREWKKNVAT 153
EIV SIM G+ E + ENA+++ + TC+IRD AE KVW +L
Sbjct: 96 EIVRSIMTKYGFVES-DKKENADIVLLMTCSIRDGAEKKVWNQLKLI------------- 141
Query: 154 GRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 212
RS S + +IV VLGCMAER++ +L+ +V++V GPD+YRDLPRL+ G GIN
Sbjct: 142 -RSNSVNKGQIVGVLGCMAERVRHDLLEKRNLVNIVAGPDSYRDLPRLVAVAAGGSNGIN 200
Query: 213 TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 272
LSL+ETYAD+ P+R+ S TAF+S+MRGC+NMC++C+VPFTRGRERSRP+ESIV+EV
Sbjct: 201 VQLSLDETYADVQPIRVDSASKTAFISIMRGCDNMCTYCVVPFTRGRERSRPIESIVEEV 260
Query: 273 DELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWR-LSEGFNSMCKVKKMGLRFADL 331
L +G K+VTLLGQNVNSY D + M+ + P + GF ++ K K GL F L
Sbjct: 261 QRLRDQGYKQVTLLGQNVNSYRDMTSMDFSMAPSTSQEDRVPGFKTVYKPKSGGLTFTTL 320
Query: 332 LDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSAVLERMRRGY 391
L++++ P++RFR+TSPHPKDFP +L+ ++ RPN+CK +HLPAQ+G+ LERM RGY
Sbjct: 321 LEKVADAAPDIRFRFTSPHPKDFPMQLIELIASRPNLCKQLHLPAQSGDDETLERMERGY 380
Query: 392 TREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDMAYMFAYSMR 451
TR+ YL LV IR ++P V L+SDFI GFCGETE+ H +TL+L++AV Y ++F YSMR
Sbjct: 381 TRDLYLRLVDDIRHVLPSVSLTSDFIAGFCGETEQAHQNTLSLIRAVRYSFCFVFPYSMR 440
Query: 452 ERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEGPNKKAPDTE 511
+T AH DDVPE+VK RR +L FRE + + +G+ Q VL+EG +K+
Sbjct: 441 GKTRAHHRLTDDVPEDVKARRHLDLTTVFREEALKLNQALIGSEQTVLLEGKSKRDASFS 500
Query: 512 LVGKSDRGHRVAF 524
G+ D G + F
Sbjct: 501 H-GRIDGGVKAVF 512
>sp|Q2RZF8|MIAB_SALRD (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Salinibacter ruber (strain DSM 13855 / M31) GN=miaB
PE=3 SV=2
Length = 503
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/448 (50%), Positives = 295/448 (65%), Gaps = 37/448 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
++Y ETYGCQMNVND IV S+++ +GY + A+V+ +NTCAIR+ AE K+ RL
Sbjct: 43 QVYIETYGCQMNVNDSGIVASVLEESGYG-LTRDQAAADVVLLNTCAIRENAERKIRARL 101
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ K + + G VLGCMAERL++K+L+ + +VDVV GPDAYRDL
Sbjct: 102 SMLRSEKEKRDGELMLG-----------VLGCMAERLREKLLEQEDLVDVVVGPDAYRDL 150
Query: 198 PRLLEEVD-YGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
P+LL E D GQ +N LS +ETY DI PVR N V+A+VS+MRGC+NMC+FC+VPFT
Sbjct: 151 PQLLYEADATGQAAVNVELSKQETYEDIQPVRYDSNGVSAYVSIMRGCDNMCTFCVVPFT 210
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE SRPV +I+ EV L +EG KEVTLLGQNVNSY+ T
Sbjct: 211 RGREESRPVTTILSEVARLAEEGYKEVTLLGQNVNSYHYTDA------------------ 252
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ FA+L+DR+S PEMR RY++ HPKD D+LL + RDRPNVC YIHLP
Sbjct: 253 -----DGTSVSFAELVDRVSRVSPEMRVRYSTSHPKDCTDDLLKVHRDRPNVCNYIHLPV 307
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q GN+ VL+RMRR YTRE YL L ++ +++ P V LS+D I GFCGETE +H DTL+LM+
Sbjct: 308 QHGNTEVLDRMRRTYTREEYLALTERAKELCPGVSLSTDLIAGFCGETEAQHEDTLSLME 367
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD AYMF YS R +T+A R Y DDVPE+ KQRRL E+IE + + +++VG V
Sbjct: 368 EVRYDHAYMFKYSERPQTYAARKYEDDVPEDTKQRRLEEIIELQNQHAKESNEAEVGRVH 427
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK+ D + G++D V F
Sbjct: 428 TVLVEGPSKKS-DAQFFGRTDTNKGVVF 454
>sp|Q11U26|MIAB_CYTH3 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469) GN=miaB PE=3 SV=1
Length = 481
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/451 (50%), Positives = 302/451 (66%), Gaps = 39/451 (8%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
Q ++Y E+YGCQMN +D EIV+SI+ G+ + + P NA+VI +NTC+IRD AE KV
Sbjct: 37 QRKLYIESYGCQMNFSDSEIVMSILTEEGF-DTTSTPNNADVILLNTCSIRDNAEQKVRH 95
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAY 194
RL +F LKR P IV VLGCMAERLK ++L+ +K+VD+V GPDAY
Sbjct: 96 RLVHFKGLKR-------------NKPSMIVGVLGCMAERLKAQLLEEEKIVDMVVGPDAY 142
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
RDLP L+ EVD G K +N LS EETYADI+P+R+S + V+AFVS+MRGC+NMCSFC+VP
Sbjct: 143 RDLPNLINEVDSGHKAVNVFLSREETYADINPLRLSGDGVSAFVSIMRGCDNMCSFCVVP 202
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRGRERSR SI+ EV EL G KEVTLLGQNV+SY K G + R++
Sbjct: 203 YTRGRERSRDAHSILNEVRELVANGYKEVTLLGQNVDSY-------KWSAEGTDERVN-- 253
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FA LL+R++L P++R R+++ HPKD DE+LY M+ N+C IHL
Sbjct: 254 -------------FAQLLERVALVDPDLRVRFSTSHPKDITDEVLYTMKKYDNICNSIHL 300
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEEHADTLT 433
PAQ+GN+ +LE M R YTRE Y++ + KIRQI+ D G+SSD I GFC ETEEEH DTL+
Sbjct: 301 PAQSGNTRILELMNRTYTREWYMERITKIRQILGDDCGISSDTIAGFCSETEEEHQDTLS 360
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
LM+ +D Y F YS R T A + DDVPE+VKQRRL+E+I R+ + + +Q+G
Sbjct: 361 LMEFARFDFGYQFVYSERPGTPAAKKLADDVPEDVKQRRLSEIITVQRQLSLEHNQAQIG 420
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
T+Q +L+EG +KK+ + +L G++ R F
Sbjct: 421 TIQKILIEGVSKKS-EHDLKGRNSRNMMAIF 450
>sp|B3ES11|MIAB_AMOA5 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Amoebophilus asiaticus (strain 5a2) GN=miaB PE=3 SV=1
Length = 486
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/448 (50%), Positives = 303/448 (67%), Gaps = 30/448 (6%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+Y E+YGCQMN+ D E+V+SI++ G+ E+ + E A+VIFINTCAIRD AE V +RL+
Sbjct: 37 LYVESYGCQMNIADSEVVVSILRPHGF-EITDTYEKADVIFINTCAIRDKAEQTVRKRLS 95
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
F LKR ++P ++ VLGCMAERLK +L+ +K+VD+V GPDAYRDL
Sbjct: 96 QFNQLKR-------------RNPDLVIGVLGCMAERLKQTLLEEEKLVDLVAGPDAYRDL 142
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
PRLL VD G K INT LS EETYADISP+R++ N V+AF+S+MRGC+NMCSFC+VPFTR
Sbjct: 143 PRLLATVDSGHKAINTFLSREETYADISPIRLNSNGVSAFISIMRGCDNMCSFCVVPFTR 202
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR SIVKE EL+++G +EVTLLGQNV+SY + +K+ +P EG
Sbjct: 203 GRERSRDPYSIVKEATELFEQGYREVTLLGQNVDSYKWSPNTDKKEQPTTP---QEGV-- 257
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
+ FA LL ++ P++R R+++ HPKD D++LY ++ N+CKYIHLP Q
Sbjct: 258 --------VNFAQLLAMVAQIHPDLRIRFSTSHPKDITDQVLYTIKAYDNICKYIHLPVQ 309
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQII-PDVGLSSDFICGFCGETEEEHADTLTLMK 436
+G+S VL+ M R Y R YL ++ IR+I+ D G+SSD I GFC ETEE+H DTL+LM+
Sbjct: 310 SGSSRVLKLMNRTYDRAWYLQKIEDIRRIVGEDCGISSDMIAGFCTETEEDHQDTLSLME 369
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
+ Y+ +YMF YS R T A R Y DDVP VK+RRL E+I+ R+ + + +G V
Sbjct: 370 HIKYEFSYMFYYSERPGTLAARKYADDVPLAVKKRRLQEIIDKQRQHSFEKNLKDIGKVY 429
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+KK+ D E G++ V F
Sbjct: 430 QVLVEGPSKKS-DIEWQGRNSANKVVVF 456
>sp|B3QVA0|MIAB_CHLT3 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78)
GN=miaB PE=3 SV=1
Length = 451
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/453 (45%), Positives = 296/453 (65%), Gaps = 46/453 (10%)
Query: 74 HSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKV 133
+ + R+Y ETYGCQMN +D EI+ SI+ +AGY+ + + A++IF+NTCA+R+ AE ++
Sbjct: 15 NQKARVYLETYGCQMNFSDTEIISSILSDAGYA-IAESEQVADIIFLNTCAVRENAEQRI 73
Query: 134 WQRLNYFWFLKREWKKNVATGRSQSKHPPKIVV--LGCMAERLKDKILDADKMVDVVCGP 191
RL LK K PK++V LGCMAERL++K+ +K+VD++ GP
Sbjct: 74 RNRLQNLRPLK--------------KQNPKLIVGVLGCMAERLREKLFQEEKIVDLIAGP 119
Query: 192 DAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFC 251
DAYR LP LL+ + G+K N +LSLEETYADI+P+R KN +AF+++MRGC+NMC+FC
Sbjct: 120 DAYRTLPNLLDLAESGEKAANVMLSLEETYADINPLR--KNGHSAFLAIMRGCDNMCAFC 177
Query: 252 IVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRL 311
IVP+TRGRERSRP+ SI+ E+ +L EG +EVTLLGQNVNSY D +
Sbjct: 178 IVPYTRGRERSRPMTSILDELKQLSDEGTREVTLLGQNVNSYYDENS------------- 224
Query: 312 SEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKY 371
G RFA+L+D+ SL P MR R+T+ HPKD EL+ ++ +R N+C++
Sbjct: 225 -------------GTRFANLMDKASLVNPNMRIRFTTSHPKDISSELIDVIAERKNLCEF 271
Query: 372 IHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADT 431
IHLP Q+G+S +LE M RG+TRE YL+ + I+ IP+ +S+D I GFC ETE +HA T
Sbjct: 272 IHLPVQSGSSRMLELMNRGHTREDYLEKIALIKSKIPNCSISTDMISGFCTETEADHAAT 331
Query: 432 LTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQ 491
L+L++ V YD A+ F YS+R T A DDVP++VKQRRL+E+I ++ + + Y +
Sbjct: 332 LSLLREVRYDYAFTFVYSVRPNTPAATRLNDDVPDDVKQRRLSEVIALQQKISAELYRND 391
Query: 492 VGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+G VL+EG +K++ D +G++ V F
Sbjct: 392 IGNTHEVLIEGESKRSSDM-WMGRARNNRVVVF 423
>sp|A6KZJ2|MIAB_BACV8 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 /
NCTC 11154) GN=miaB PE=3 SV=1
Length = 456
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/463 (46%), Positives = 291/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT SE +++ ETYGCQMNV D E++ SIM+ AGY V + A+ +F+N
Sbjct: 6 GADFKSATDSE---NKKLFIETYGCQMNVADSEVIASIMQMAGY-HVCETLDEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K+ ++N+ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKNKRRNLIVG-----------VLGCMAERVKDDLIE- 109
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY ++ P RI N ++ FVS+M
Sbjct: 110 NHHVDLVVGPDAYLTLPDLVASVEAGEKAINVELSTTETYREVIPSRICGNHISGFVSIM 169
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C +CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 170 RGCNNFCHYCIVPYTRGRERSRDVESILNEVRDLADKGYKEVTLLGQNVNSYR----FEK 225
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E E + F LL ++ P+MR R+T+ HPKD DE L +
Sbjct: 226 EGEI--------------------ITFPMLLRTVAEAVPDMRVRFTTSHPKDMSDETLQV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ + PNVCK+IHLP Q+G+S +L+ M R YTRE YL+ V IR+IIPD GLS+D G+
Sbjct: 266 IAETPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLERVAAIRRIIPDCGLSTDIFSGYH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+ YD A+MF YS R T+A ++ DDVPEEVK RRL E+IE
Sbjct: 326 SETEEDHQESLSLMRECAYDSAFMFKYSERPGTYASKHLPDDVPEEVKIRRLNEIIELQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + VG V+VEG +K++ + +L G++ + V F
Sbjct: 386 RLSAESNARDVGKTFEVMVEGVSKRSRE-QLFGRTQQNKVVVF 427
>sp|A6LEM6|MIAB_PARD8 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Parabacteroides distasonis (strain ATCC 8503 / DSM
20701 / NCTC 11152) GN=miaB PE=3 SV=1
Length = 457
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/461 (45%), Positives = 300/461 (65%), Gaps = 42/461 (9%)
Query: 64 EVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTC 123
++ SAT S+ + +++ ETYGCQMNV D E+V SIMK GYS N+ E A+ IF+NTC
Sbjct: 9 DLKSATQSD---ERKLFIETYGCQMNVADSEVVASIMKMDGYSMTENI-EEADAIFVNTC 64
Query: 124 AIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADK 183
++RD AE K++ RL YF LKR+ KK++ G VLGCMAER+K+ ++
Sbjct: 65 SVRDNAEQKIYGRLQYFQSLKRK-KKSLIVG-----------VLGCMAERVKEDLIHVHH 112
Query: 184 MVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRG 243
D+V GPD+Y DLP L+ V++G+K IN LS +ETY D+ P+++ ++ FVS+MRG
Sbjct: 113 -ADLVVGPDSYLDLPNLVGAVEHGEKAINVELSTQETYKDVIPLKLPGVHISGFVSIMRG 171
Query: 244 CNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEV 303
CNN C++CIVP+TRGRERSR +ESI+ E+ ++ ++G KEVTLLGQNVNSY+ EKE
Sbjct: 172 CNNFCTYCIVPYTRGRERSRDIESILNEIRDMHEKGFKEVTLLGQNVNSYS----FEKEG 227
Query: 304 EPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMR 363
E + F LLDR++ E P+MR R+T+ HPKD D+ L ++
Sbjct: 228 ET--------------------ITFPILLDRVAKEVPDMRIRFTTSHPKDMSDDTLRVIA 267
Query: 364 DRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGE 423
N+CK+IHLPAQ+G+S +L+ M R YTRE YLD + IR+I+PD +S+D CGF E
Sbjct: 268 ANDNICKFIHLPAQSGSSRILKVMNRKYTREWYLDRIAAIRRIVPDCAISTDLFCGFHSE 327
Query: 424 TEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRES 483
TEE++ +TL+LM+ VGYD A++F YS R T+A + D+VPEE K RRL +I+ +
Sbjct: 328 TEEDYQETLSLMREVGYDSAFLFKYSERPGTYAASHLEDNVPEEEKVRRLQGMIDLQNKL 387
Query: 484 TGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VL+EG +K++ + +L G++ + V F
Sbjct: 388 SEESNLRDIGKTFEVLIEGFSKRSRE-QLFGRTSQNKVVIF 427
>sp|A5FIU2|MIAB_FLAJ1 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM
2064 / UW101) GN=miaB PE=3 SV=1
Length = 481
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 292/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D E+V SI+ + GY+ +V E A+++ +NTC+IRD AE + +RL
Sbjct: 25 KLFIESYGCAMNFSDSEVVASILSDGGYN-TTSVLEEADLVLVNTCSIRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLK + L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRTNPK------------MKVGVLGCMAERLKSQFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G+ IN +LS EETY DISPVR+ N +TA VS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLLAEVEEGRDAINVILSKEETYGDISPVRLMSNGITALVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI+ E+ +LW +G KE+TLLGQNV+SY G L + F +
Sbjct: 192 GRERSREPQSIMAEIQDLWSKGFKEITLLGQNVDSYLWYGG-----------GLKKDFVN 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + F LL+ +++ FP+MR R+++ +P+D + +L++M PN+CK+IHLP
Sbjct: 241 ASEMQKATAVDFDQLLEMVAVGFPKMRIRFSTSNPQDMHESILHVMAKYPNICKHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R ++RE Y+ L+ KIR I+PD +S D I GF ETE++H DT++LM+
Sbjct: 301 QSGSNRILKEMNRLHSREEYMALIDKIRAIVPDASISQDMIAGFPTETEQDHQDTMSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YM++YS R T A R DDV EE K RRL E+++ ++ + VG
Sbjct: 361 YVKYNFGYMYSYSERPGTLAGRKMKDDVEEETKARRLQEIVDLQQKHAWFRSEEFVGKTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +KK+ D E G++ + V F
Sbjct: 421 EVLVEKVSKKSKD-EFSGRNSQSITVVF 447
>sp|Q650P7|MIAB_BACFR (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacteroides fragilis (strain YCH46) GN=miaB PE=3 SV=1
Length = 457
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/463 (45%), Positives = 293/463 (63%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K++ KK++ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKK-KKHLIVG-----------VLGCMAERVKDDLIE- 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
VD+V GPDAY LP L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 HHHVDLVVGPDAYLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KE+TLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVSKGYKEITLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E G + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 E---GGEV----------------VTFPMLLRLVAEAAPGIRVRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++I+PD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIVPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+A GYD A+MF YS R T+A ++ D+VPEE+K RRL E+I
Sbjct: 326 SETEEDHRESLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEEIKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNNRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>sp|Q5LJ70|MIAB_BACFN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
GN=miaB PE=3 SV=1
Length = 457
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/463 (45%), Positives = 293/463 (63%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F +K++ KK++ G VLGCMAER+KD +++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSMKKK-KKHLIVG-----------VLGCMAERVKDDLIE- 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
VD+V GPDAY LP L+ V+ G+K +N LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 HHHVDLVVGPDAYLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KE+TLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVSKGYKEITLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
E G + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 E---GGEV----------------VTFPMLLRLVAEAAPGIRVRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++I+PD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIVPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H ++L+LM+A GYD A+MF YS R T+A ++ D+VPEE+K RRL E+I
Sbjct: 326 SETEEDHRESLSLMEACGYDAAFMFKYSERPGTYASKHLEDNVPEEIKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNNRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>sp|A6H119|MIAB_FLAPJ (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511) GN=miaB PE=3 SV=1
Length = 481
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 292/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D EIV SI+ GY+ NV E A+++ +NTC+IRD AE + +RL
Sbjct: 25 KLFIESYGCAMNFSDSEIVASILSGNGYN-TTNVLEEADLVLVNTCSIRDKAEQTIRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR K K+ VLGCMAERLKDK L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKRINPK------------MKVGVLGCMAERLKDKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P LL EV+ G+ IN +LS +ETY DISPVR+ N +TA V++ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLLNEVEEGRDAINVILSKDETYGDISPVRLMSNGITALVAITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI+ E+ +LW +G KE+TLLGQNV+SY G L + F +
Sbjct: 192 GRERSREPQSIMAEIQDLWHKGFKEITLLGQNVDSYLWYGG-----------GLKKDFTN 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K + F LL+ +++ FP+MR R+++ +P+D + +L++M N+CK+IHLP
Sbjct: 241 ASEIQKATAVDFDQLLEMVAVGFPKMRIRFSTSNPQDMHESILHVMAKHSNICKHIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L+ M R +TRE Y+ L+ KIR IIP+ +S D I GF ETEE+H DT++LM+
Sbjct: 301 QSGSNRILKEMNRLHTREEYMILIDKIRAIIPNASISQDMIAGFPTETEEDHQDTISLMQ 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V Y+ YM++YS R T A R DDV +E+K RRL E+++ ++ + +G
Sbjct: 361 YVKYNFGYMYSYSERPGTLAGRKMKDDVSDEIKARRLQEIVDLQQKHAWWRSEDFIGQTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE +KK+ + E G++ + V F
Sbjct: 421 EVLVEKVSKKSTE-EFSGRNSQSITVVF 447
>sp|A0M7D3|MIAB_GRAFK (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Gramella forsetii (strain KT0803) GN=miaB PE=3 SV=1
Length = 481
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/448 (44%), Positives = 292/448 (65%), Gaps = 26/448 (5%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ E+YGC MN +D EIV SI+ G++ N+ E A+++ +NTC+IR+ AE V +RL
Sbjct: 25 KLFIESYGCAMNFSDSEIVASILSKEGFNTTQNLEE-ADLVLVNTCSIREKAEQTVRKRL 83
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ +KR + G K+ VLGCMAERLKDK L+ +K+VD+V GPDAY+DL
Sbjct: 84 EKYNAVKR-----INPGM-------KVGVLGCMAERLKDKFLEEEKIVDLVVGPDAYKDL 131
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ EV+ G+ IN +LS EETY DISPVR+ N V+AFVS+ RGC+NMC+FC+VPFTR
Sbjct: 132 PNLINEVEEGRDAINVILSKEETYGDISPVRLQSNGVSAFVSITRGCDNMCTFCVVPFTR 191
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SIV+EV++L +G KE+TLLGQNV+SY G L + F +
Sbjct: 192 GRERSRDPQSIVEEVNDLAAKGYKEITLLGQNVDSYLWYGG-----------GLKKDFKN 240
Query: 318 MCKVKK-MGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+++K FA LL ++ P+MR R+++ +P+D +++ M N+C YIHLP
Sbjct: 241 ATEIQKATATNFAALLKLVAEAQPKMRIRFSTSNPQDMTLDVIEAMAAYRNICNYIHLPV 300
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G+ +L++M R +TRE Y L+ I+++IP+ G+S D I GF ETEE+H DTL+LM+
Sbjct: 301 QSGSDRILKKMNRLHTREEYFTLIDNIKKMIPNCGISHDLITGFPTETEEDHQDTLSLME 360
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V YD YMF YS R T A R DD+PEE K+RRL E+++ ++ + Q +S +GT
Sbjct: 361 YVKYDFGYMFTYSERPGTTAERKLEDDIPEETKKRRLQEIVDLQQKHSKQNTNSVIGTTV 420
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL+E +KK+ + G+++R F
Sbjct: 421 EVLIEKESKKS-NKHWSGRNERNTVTVF 447
>sp|Q8A2W0|MIAB_BACTN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM
2079 / NCTC 10582 / E50 / VPI-5482) GN=miaB PE=3 SV=1
Length = 455
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/463 (45%), Positives = 288/463 (62%), Gaps = 41/463 (8%)
Query: 62 ASEVSSATGSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFIN 121
++ SAT + +++ ETYGCQMNV D E++ S+M+ AGYS V E A+ +F+N
Sbjct: 6 GADFKSATADD---NKKLFIETYGCQMNVADSEVIASVMQMAGYS-VAETLEEADAVFMN 61
Query: 122 TCAIRDYAEHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDA 181
TC+IRD AE K+ RL +F LK++ KK + G VLGCMAER+KD ++
Sbjct: 62 TCSIRDNAEQKILNRLEFFHSLKKK-KKALIVG-----------VLGCMAERVKDDLI-T 108
Query: 182 DKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVM 241
+ VD+V GPDAY LP L+ V+ G+K IN LS ETY D+ P RI N ++ FVS+M
Sbjct: 109 NHHVDLVVGPDAYLTLPELIAAVEAGEKAINVDLSTTETYRDVIPSRICGNHISGFVSIM 168
Query: 242 RGCNNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEK 301
RGCNN C++CIVP+TRGRERSR VESI+ EV +L +G KEVTLLGQNVNSY EK
Sbjct: 169 RGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVAKGYKEVTLLGQNVNSYR----FEK 224
Query: 302 EVEPGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYI 361
P + F LL ++ P +R R+T+ HPKD DE L +
Sbjct: 225 ---PTGEV----------------VTFPMLLRMVAEAAPGVRIRFTTSHPKDMSDETLEV 265
Query: 362 MRDRPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFC 421
+ PNVCK+IHLP Q+G+S +L+ M R YTRE YLD V I++IIPD GL++D GF
Sbjct: 266 IAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKRIIPDCGLTTDIFSGFH 325
Query: 422 GETEEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFR 481
ETEE+H +L+LM+ GYD A+MF YS R T+A ++ D+VPE+VK RRL E+I
Sbjct: 326 SETEEDHQLSLSLMEECGYDAAFMFKYSERPGTYASKHLEDNVPEDVKVRRLNEIIALQN 385
Query: 482 ESTGQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + +G VLVEG +K++ D +L G++++ V F
Sbjct: 386 RLSAESNQRCIGKTYEVLVEGVSKRSRD-QLFGRTEQNRVVVF 427
>sp|Q8F743|MIAB_LEPIN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Leptospira interrogans serogroup Icterohaemorrhagiae
serovar Lai (strain 56601) GN=miaB PE=3 SV=1
Length = 449
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 279/449 (62%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+M++A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMRDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRKGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L ++G++++TLLGQNVNSY
Sbjct: 176 TRGRERSRDPKSIVREVQDLVQKGIRQITLLGQNVNSY---------------------- 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K+ FA L+ L E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 214 ------KEQDTDFAGLIQMLLDETSIERIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL ++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLDVVKEIRNIVPDVGITTDIIVGFPNETEEEFEDTLAVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ + +L G++ G F
Sbjct: 388 YSILIENISRKS-EKQLCGRTPCGRMTVF 415
>sp|Q72PA4|MIAB_LEPIC (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Leptospira interrogans serogroup Icterohaemorrhagiae
serovar copenhageni (strain Fiocruz L1-130) GN=miaB PE=3
SV=1
Length = 449
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 279/449 (62%), Gaps = 45/449 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+M++A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMRDAEYSTSSD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRD 196
L +LK+ N+ G VLGCMA+ L D + + +D+V GPD YR
Sbjct: 70 LQSLGYLKKR-NPNLVIG-----------VLGCMAQNLGDDLFHQELPLDLVVGPDNYRS 117
Query: 197 LPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+VP+
Sbjct: 118 LPELIQRIRKGENSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVVPY 175
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERSR +SIV+EV +L ++G++++TLLGQNVNSY
Sbjct: 176 TRGRERSRDPKSIVREVQDLVQKGIRQITLLGQNVNSY---------------------- 213
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
K+ FA L+ L E R R+TSPHPKDFP LL +M + P C IHLP
Sbjct: 214 ------KEQDTDFAGLIQMLLDETSIERIRFTSPHPKDFPTHLLQLMSENPRFCPNIHLP 267
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL ++
Sbjct: 268 LQAGNTRVLEEMKRSYSKEEFLDVVKEIRNIVPDVGITTDIIVGFPNETEEEFEDTLAVV 327
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +DMA+MF YS RE T A R D+VPEEVK RLT+L++ + + +++G V
Sbjct: 328 REVQFDMAFMFKYSEREGTMAQRKLPDNVPEEVKSARLTKLVDLQTSISHEQNRARIGRV 387
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+E ++K+ + +L G++ G F
Sbjct: 388 YSILIENISRKS-EKQLCGRTPCGRMTVF 415
>sp|B6YRD1|MIAB_AZOPC (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Azobacteroides pseudotrichonymphae genomovar. CFP2
GN=miaB PE=3 SV=1
Length = 449
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/447 (43%), Positives = 278/447 (62%), Gaps = 40/447 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
RI+ ETYGCQMN+ D EIV++I++ G+ N+ E A+V+ INTC++R+ AE K++ RL
Sbjct: 14 RIFIETYGCQMNIADSEIVIAIVQMDGFEYTENILE-ADVVLINTCSVRENAEKKIFSRL 72
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
YF LK++ + + I VLGCMA+R+++ ++ VD+V GPD+Y DL
Sbjct: 73 QYFQSLKKKRNQLI------------IGVLGCMAKRIRETLIQ-QYHVDLVVGPDSYMDL 119
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+ V+ G K IN LS E Y I P+++S+ ++ F+S++RGCNN CS+CIVP+TR
Sbjct: 120 PHLIGTVEKGAKAININLSSTEVYKGIVPLKLSRIKISGFISIIRGCNNFCSYCIVPYTR 179
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERSR +SI+ E+ L ++G KEV LLGQNVNSY + +E
Sbjct: 180 GRERSRDPKSILNELHILKEQGYKEVILLGQNVNSY---------------FYKNENITD 224
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
F LL+ ++L PEMR R+T+ HPKD DE L ++ N+CK+IHLP Q
Sbjct: 225 ----------FPHLLELVALNAPEMRIRFTTSHPKDMGDETLRVIAKYNNICKHIHLPIQ 274
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L M R YTRE YL V IR+I+P+V +S+D CGF ETEE+H TL+LMK
Sbjct: 275 SGSSKILRAMNRKYTREWYLQRVTSIRKIVPEVSISTDLFCGFPSETEEDHKKTLSLMKE 334
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VG+D A+MF YS R T+A R D+VPEEVK RRL E+I + + +G
Sbjct: 335 VGFDSAFMFKYSERPETYASRYLPDNVPEEVKIRRLNEIITLQLKISLMKNKENIGKTME 394
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
+L+EG +K++ + +L G++ + V F
Sbjct: 395 ILIEGFSKRSRE-QLFGRTLQNKIVLF 420
>sp|Q053R5|MIAB_LEPBL (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Leptospira borgpetersenii serovar Hardjo-bovis
(strain L550) GN=miaB PE=3 SV=1
Length = 449
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/451 (43%), Positives = 278/451 (61%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K P++V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPELVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRSGEHSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G+++VTLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLTEKGIRQVTLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FA L+ L E R R+TSPHPKDFP LL +M P C IH
Sbjct: 214 --------KEQGTDFAGLIQMLLDETTIERIRFTSPHPKDFPVRLLRLMAQNPRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVREIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A + D+V EE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMARKKLPDNVSEETKSARLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V +L+E ++K+ + +L G++ G F
Sbjct: 386 RVYSILIENTSRKS-EKQLCGRTPCGRMTVF 415
>sp|Q04UA3|MIAB_LEPBJ (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Leptospira borgpetersenii serovar Hardjo-bovis
(strain JB197) GN=miaB PE=3 SV=1
Length = 449
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/451 (43%), Positives = 278/451 (61%), Gaps = 49/451 (10%)
Query: 77 GRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQR 136
G++Y ETYGCQMN D IV S+MK+A YS + PEN+++IF+NTCAIR+ A K++ R
Sbjct: 11 GKVYIETYGCQMNEYDSGIVSSLMKDAEYSSSPD-PENSDIIFLNTCAIRENAHAKIYNR 69
Query: 137 LNYFWFLKREWKKNVATGRSQSKHPPKIV--VLGCMAERLKDKILDADKMVDVVCGPDAY 194
L +LK K P++V VLGCMA+ L D + + +D+V GPD Y
Sbjct: 70 LQSLGYLK--------------KRNPELVIGVLGCMAQNLGDDLFHQELPLDLVVGPDNY 115
Query: 195 RDLPRLLEEVDYGQKGIN-TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
R LP L++ + G+ I+ T LS ETY +I P + N + AFV++MRGCNN C+FC+V
Sbjct: 116 RSLPELIQRIRSGEHSISLTRLSKIETYDEIEPRVV--NGIQAFVTIMRGCNNFCTFCVV 173
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
P+TRGRERSR +SIV+E+ +L ++G+++VTLLGQNVNSY
Sbjct: 174 PYTRGRERSRDPKSIVREIQDLTEKGIRQVTLLGQNVNSY-------------------- 213
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
K+ G FA L+ L E R R+TSPHPKDFP LL +M P C IH
Sbjct: 214 --------KEQGTDFAGLIQMLLDETTIERIRFTSPHPKDFPVRLLRLMAQNPRFCPNIH 265
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q GN+ VLE M+R Y++E +LD+V++IR I+PDVG+++D I GF ETEEE DTL
Sbjct: 266 LPLQAGNTRVLEEMKRSYSKEEFLDVVREIRNIVPDVGITTDIIVGFPNETEEEFEDTLA 325
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
+++ V +DMA+MF YS RE T A + D+V EE K RLT+L++ + + +++G
Sbjct: 326 VVREVQFDMAFMFKYSEREGTMARKKLPDNVSEETKSARLTKLVDLQTSISHEQNRARIG 385
Query: 494 TVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V +L+E ++K+ + +L G++ G F
Sbjct: 386 RVYSILIENTSRKS-EKQLCGRTPCGRMTVF 415
>sp|B4SCB6|MIAB_PELPB (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 /
BU-1) GN=miaB PE=3 SV=1
Length = 440
Score = 351 bits (901), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 263/445 (59%), Gaps = 42/445 (9%)
Query: 80 YQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNY 139
Y T+GCQMN D + S+++ AGY + A +I +NTCA+R+ A ++ L +
Sbjct: 10 YIHTFGCQMNQADSATITSLLQQAGYVAA-ESEDRAGIILLNTCAVRENAVDRIEHYLQH 68
Query: 140 FWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK+ K+ + + +LGC+ + ++++ +D++ GPD YR LP+
Sbjct: 69 LQGLKKRDKRLI------------VGILGCIPQHQREEMFATSPAIDLLAGPDTYRTLPQ 116
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L+E+ G K + ++ ETY I PVR + S++AFV VMRGCNNMC++C+VPFTRGR
Sbjct: 117 LIEQARSGAKPFSLDFNVAETYEGIDPVR--QGSISAFVPVMRGCNNMCAYCVVPFTRGR 174
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERS P +++ EV +L G E+TLLGQNVNSY+D
Sbjct: 175 ERSHPFRAVMGEVQKLVASGYSEITLLGQNVNSYDD------------------------ 210
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
+ G+ FA LLD +S P+ R R+T+ HPKD EL+ + +RPN+C +IHLP Q+G
Sbjct: 211 --PEQGVNFAALLDAVSCAAPQARVRFTTSHPKDISGELVRTIANRPNICNHIHLPVQSG 268
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
++A L RM RG+T E YL+ + IR ++P V LS+D I GFCGE EE+H +L L+ +
Sbjct: 269 STATLGRMNRGHTIEEYLEKIALIRSLLPGVTLSTDIIAGFCGEQEEDHQASLELLSTLR 328
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
+D AYMF YS R T A R VDDVPE VK+RRL E+I+ +G+ + +G+V VL
Sbjct: 329 FDSAYMFYYSTRPGTFAARTLVDDVPEVVKKRRLQEIIDLQNTISGELFQQAIGSVVEVL 388
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
E +K++ + +L+G++ V F
Sbjct: 389 AESESKRSAE-QLMGRTPGNRAVVF 412
>sp|B4S564|MIAB_PROA2 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413)
GN=miaB PE=3 SV=1
Length = 441
Score = 345 bits (886), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 186/442 (42%), Positives = 268/442 (60%), Gaps = 42/442 (9%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
T+GCQMN D EI+ S++ GY ++ ++A+++ +NTCA+R+ A K+ L+
Sbjct: 9 TFGCQMNQADTEIISSLLTAEGYC-LVAEEDDADLVMLNTCAVRENAVEKIMHHLDSLKG 67
Query: 143 LKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLE 202
L+R + V V+GC+ + ++++ ++D + GPD+YR LP L+
Sbjct: 68 LRRRRRGLVVG------------VIGCVPQYYREEMFQKSGVIDFIAGPDSYRKLPGLIR 115
Query: 203 EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERS 262
G +G L+ ETY DI P+R S++AF+ VMRGCNNMC+FC+VPFTRGRERS
Sbjct: 116 NAFQGIRGAELFLTQSETYGDIEPMR--SGSISAFIPVMRGCNNMCAFCVVPFTRGRERS 173
Query: 263 RPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMCKVK 322
R ++S++ EV L +G +E+TLLGQNVNSY D E GA+
Sbjct: 174 RSLQSVLDEVRRLEGQGYRELTLLGQNVNSYRDD-------EAGAD-------------- 212
Query: 323 KMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTGNSA 382
FA LLD +S EMR R+T+ HPKD ++L+ ++ R NVC IHLP Q+G+S
Sbjct: 213 -----FALLLDEVSKAAGEMRVRFTTSHPKDISEDLVNVVAQRENVCNAIHLPVQSGSSR 267
Query: 383 VLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVGYDM 442
+LE M RG+TR YLD + IR +P V LS+D I GFCGETEE+H TL+LM+ V +D
Sbjct: 268 MLEVMHRGHTRREYLDKIAMIRSAVPGVALSTDLIAGFCGETEEDHLQTLSLMEEVRFDY 327
Query: 443 AYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVLVEG 502
AYMF YS+R T+A R+ DDV E K+RRL E+I+ +G+ + + VG+VQ VL E
Sbjct: 328 AYMFYYSVRPGTYAARHLTDDVALEEKKRRLQEIIDLQSGISGEIFGNDVGSVQEVLAES 387
Query: 503 PNKKAPDTELVGKSDRGHRVAF 524
++++ D L+G+SD V F
Sbjct: 388 ESRRSSDM-LMGRSDTNRVVVF 408
>sp|A8Z642|MIAB_SULMW (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB OS=Sulcia
muelleri (strain GWSS) GN=miaB PE=3 SV=1
Length = 453
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/433 (41%), Positives = 266/433 (61%), Gaps = 30/433 (6%)
Query: 76 QGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQ 135
+ + Y E YGCQMN++D EIV SI+ N G+ + N+ E A +I INTC+IRD +E K+
Sbjct: 3 KKKFYIENYGCQMNISDSEIVSSILNNKGFIKTENLKE-ANIILINTCSIRDKSEKKILL 61
Query: 136 RLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYR 195
R+N F+ KKN + I +LGCMA + K+ + K++++V GPD+YR
Sbjct: 62 RINQIKFI---IKKN---------NDILIGILGCMAYKFKN--IKEKKLINLVVGPDSYR 107
Query: 196 DLPRLLEEVDYGQKG--INTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIV 253
++P L+ + +KG I+T S ETYADI P R K +TAFV++MRGC+NMC+FC+V
Sbjct: 108 EIPNLINNF-FKKKGEYISTSFSKTETYADIIPKREEK-KITAFVTIMRGCDNMCTFCVV 165
Query: 254 PFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSE 313
PFTRGRE+SR SI+KE L+K+G KE+ LLGQNV+SY G K+ + E
Sbjct: 166 PFTRGREKSRDPYSIIKECKFLFKKGYKEIILLGQNVDSYLWYGGGLKKKFKIKEIKNEE 225
Query: 314 GFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIH 373
N F+ LL+ +++ P MR R+ + +P D D +L +++ N+CK+IH
Sbjct: 226 IIN-----------FSKLLELVAISVPLMRIRFCTSNPNDMSDNVLNVIKKYINICKHIH 274
Query: 374 LPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLT 433
LP Q+G++ +L M R +T E Y+ L+ KI+ IIP+ LS D I GFC E E +H +TL
Sbjct: 275 LPVQSGSNRILSLMNRKHTCEDYILLINKIKNIIPNCSLSCDIITGFCNENENDHNETLN 334
Query: 434 LMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVG 493
LM V Y+ +YMF YS R T+A++ +D+V K+RRLTE+I + + +G
Sbjct: 335 LMNYVKYNFSYMFIYSHRIGTYAYKKLIDNVSLSTKKRRLTEIINLQKTHSYYRNRKYIG 394
Query: 494 TVQLVLVEGPNKK 506
++Q +L+EG + K
Sbjct: 395 SIQDILIEGISTK 407
>sp|Q8KB05|MIAB_CHLTE (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 /
TLS) GN=miaB PE=3 SV=1
Length = 444
Score = 331 bits (849), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 185/460 (40%), Positives = 265/460 (57%), Gaps = 69/460 (15%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPE----NAEVIFINTCAIRDYAEHKVW 134
Y T+GCQMN D EIV ++++ G+ VP NA+++ +N+CA+R+ AE ++
Sbjct: 12 FYIHTFGCQMNQADSEIVTALLRAEGF-----VPSADETNADIVLLNSCAVRENAEERLG 66
Query: 135 QRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAY 194
L + KR K+ V I VLGC+ + ++++ VD + GPD Y
Sbjct: 67 NILMHLKGRKRRCKELV------------IGVLGCVPQFERERVFSDYPFVDFIVGPDNY 114
Query: 195 RDLPRLLEEV----------DYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGC 244
R+L L+ + DY Q ETYA I PVR S++AF+ VMRGC
Sbjct: 115 RELAGLVAGLREAVARPALLDYDQT---------ETYAGIEPVR--AGSISAFLPVMRGC 163
Query: 245 NNMCSFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVE 304
NN C+FC+VP TRGRERS E +V EV L K G +EVTLLGQNVNS+ D
Sbjct: 164 NNHCAFCVVPVTRGRERSVGFERVVAEVVALEKAGFREVTLLGQNVNSWRDA-------- 215
Query: 305 PGANWRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRD 364
+ GL FA LL+ +SL P MR R+T+ HPKD + L+ ++
Sbjct: 216 ------------------EKGLDFAGLLEGVSLAVPSMRIRFTTSHPKDISEALVKVIAA 257
Query: 365 RPNVCKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGET 424
RPN+C +IHLP Q+G+S +L+ M+RG+TRE YLD + IR IP+V +++D I GFC ET
Sbjct: 258 RPNLCNHIHLPVQSGSSRMLDLMKRGHTREEYLDRIAMIRSYIPEVAITTDLIAGFCTET 317
Query: 425 EEEHADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFREST 484
E++H +TL+LM+AVGYD A+MF YS+R T A RN DDVP+ VK+ RL E+IE +
Sbjct: 318 EKDHRETLSLMEAVGYDTAFMFHYSVRPGTWAARNLPDDVPDTVKKARLQEIIELQNAIS 377
Query: 485 GQCYDSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ + ++G VL E +K++ ++ L+G++ V F
Sbjct: 378 REIFQREIGKTVEVLAEAESKRS-ESMLMGRTPENRVVVF 416
>sp|B3QR49|MIAB_CHLP8 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Chlorobaculum parvum (strain NCIB 8327) GN=miaB PE=3
SV=1
Length = 443
Score = 326 bits (835), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/447 (39%), Positives = 264/447 (59%), Gaps = 43/447 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
+ T+GCQMN+ D EIV +I+ G++ + A+++ +NTCA+R A + L+
Sbjct: 5 FFIHTFGCQMNMADTEIVTAILVEGGFAPAED-EGTADMVLLNTCAVRANAVDRAGNVLS 63
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
+ +KR +K + G +LGC+ + ++++ VD + GPD YRDL
Sbjct: 64 HLKGMKRR-RKGLVVG-----------LLGCVPQYEREQLFGDFPFVDFIVGPDNYRDLC 111
Query: 199 RLLEEVDYG-QKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
++ V G Q+ +ETYA I P+R N V+ F+ VMRGCNN C+FC+VP TR
Sbjct: 112 GIVRSVREGEQRRAFIDYDQQETYAGIDPIR--ANRVSTFLPVMRGCNNHCAFCVVPVTR 169
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERS + ++ EV L + G +EVTLLGQNVNS+
Sbjct: 170 GRERSVAFDRVIAEVAALEQAGYREVTLLGQNVNSW------------------------ 205
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
C K L FA LL+ +S P MR R+T+ HPKD + L+ ++ +RPN+CK+IHLP Q
Sbjct: 206 -CDADK-SLDFAGLLEGVSHAAPSMRIRFTTSHPKDISESLVRVIGERPNLCKHIHLPVQ 263
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+S +L+ M+RG+TRE YLD + IR+++P V +++D I GFC ETE +H +TL+LM+A
Sbjct: 264 SGSSRMLDLMKRGHTREEYLDKIAMIRELVPGVAITTDLIAGFCTETEVDHRETLSLMEA 323
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
VGYD A+MF YS+R T A RN DDVPE VK+ RL E+I+ + + Y ++G V
Sbjct: 324 VGYDTAFMFYYSVRPGTWAARNLPDDVPEAVKKARLQEIIDLQTAMSRELYQREIGKVVE 383
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL E +K++ ++L+G++ V F
Sbjct: 384 VLAEAESKRSA-SQLMGRTSENRAVVF 409
>sp|A4SCW6|MIAB_PROVI (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Prosthecochloris vibrioformis (strain DSM 265)
GN=miaB PE=3 SV=1
Length = 448
Score = 325 bits (834), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/452 (38%), Positives = 264/452 (58%), Gaps = 43/452 (9%)
Query: 74 HSQGR-IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHK 132
H +GR Y T+GCQMN D I+ +I+ + G+ V E+A+++ +NTCA+R+ A +
Sbjct: 3 HEKGRSFYIHTFGCQMNQADSAIITAILMDGGF-RVAGSQEDADIVILNTCAVRENAVER 61
Query: 133 VWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPD 192
+ +L + KR KK++ G V GC+ + LK ++L+ ++D + GPD
Sbjct: 62 ITHQLQFLRGAKRR-KKSLLVG-----------VAGCVPQHLKREMLEMFPVIDFLAGPD 109
Query: 193 AYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCI 252
YR+LP L+ + + G++ +EETYA I P+R + V AFV V RGCNNMC+FC+
Sbjct: 110 TYRNLPALIGDAEEGKRPAALEFRIEETYAGIDPLR--EVGVGAFVPVTRGCNNMCAFCV 167
Query: 253 VPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLS 312
VPFTRGRERS+P +++ EV + ++G E+TLLGQNVNSY D
Sbjct: 168 VPFTRGRERSQPFSAVMDEVRRVVEKGYGEITLLGQNVNSYAD----------------- 210
Query: 313 EGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYI 372
+ G FA LL +S E P R R+T+ HPKD +L+ + D PN+C ++
Sbjct: 211 ---------PEEGRDFASLLRAVSREAPGCRIRFTTSHPKDISPDLVDAIADSPNICNHV 261
Query: 373 HLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTL 432
HLP Q+G+S +L RM RG+ + YL+ V +R+ IP V L++D I GFCGE +E+H TL
Sbjct: 262 HLPVQSGSSRMLHRMNRGHGIDEYLETVALLRRRIPGVSLTTDLIAGFCGEEDEDHEATL 321
Query: 433 TLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQV 492
L++ V YD A+MF YS R T A + D VP VK++RL E+I+ + +C V
Sbjct: 322 ALLREVRYDNAFMFYYSPRFGTAAWKTLADTVPLAVKKQRLQEIIDLQLSISAECLQEAV 381
Query: 493 GTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
G+V VL E ++++ + +L+G++ V F
Sbjct: 382 GSVVDVLAESESRRSTE-QLMGRTGTNRAVVF 412
>sp|Q3AU39|MIAB_CHLCH (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Chlorobium chlorochromatii (strain CaD3) GN=miaB PE=3
SV=1
Length = 449
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/449 (38%), Positives = 253/449 (56%), Gaps = 44/449 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
Y T+GCQMN D I+ +I++N GY N +A ++ +NTCA+R++A +V L
Sbjct: 9 FYIHTFGCQMNQADSGIMTAILQNEGYVAASN-EADAGIVLLNTCAVREHATERVGHLLQ 67
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLP 198
+ K+ K + G V GC+ + ++ + +VD + GPD YR LP
Sbjct: 68 HLHGRKKRSKGRLLVG-----------VTGCIPQYEREVLFKNYPVVDFLAGPDTYRSLP 116
Query: 199 RLLEEVDYGQKGIN---TLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPF 255
L+++V KG + ETY I PVR S S++AFV VMRGCNN C++C+VP
Sbjct: 117 LLIKQVQQAGKGATEAALAFNSAETYDGIEPVRSS--SMSAFVPVMRGCNNHCAYCVVPL 174
Query: 256 TRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGF 315
TRGRERS P +++ EV +L + G +E+TLLGQNVNSY D P A
Sbjct: 175 TRGRERSHPKAAVLNEVRQLAEAGYREITLLGQNVNSYYD---------PLAQC------ 219
Query: 316 NSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLP 375
FA+LL +S P R R+T+ HPKD + L+ + + N+C +IHLP
Sbjct: 220 -----------NFAELLAAVSCAAPATRIRFTTSHPKDISEALVRTIAEHSNICNHIHLP 268
Query: 376 AQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLM 435
Q+G+S +L M+RG+T E YL+ + IR +IP+V LS+D I GFCGETE +H TL L+
Sbjct: 269 VQSGSSRILRLMQRGHTIEEYLEKIALIRSLIPNVTLSTDMIAGFCGETEADHQATLRLL 328
Query: 436 KAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTV 495
+ V +D A+MF YS R RT A DDVPE +K+ RL E+IE + + VG+V
Sbjct: 329 EEVQFDSAFMFYYSPRPRTPAAEKLTDDVPEALKKARLQEIIECQNRISASLFSQAVGSV 388
Query: 496 QLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL E ++++ + +L+G++ V F
Sbjct: 389 VEVLAEAESRRSSE-QLMGRTAGNRTVVF 416
>sp|B3ENP4|MIAB_CHLPB (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Chlorobium phaeobacteroides (strain BS1) GN=miaB PE=3
SV=1
Length = 447
Score = 318 bits (815), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 268/455 (58%), Gaps = 42/455 (9%)
Query: 70 GSEVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYA 129
G+ + ++Y T+GCQMN D EI+ +++++ GY + E A+++ +NTCA+R+ A
Sbjct: 7 GNVLQMTKKVYIRTFGCQMNQADTEIITALLQDEGYV-MTGSEERADLVILNTCAVRENA 65
Query: 130 EHKVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVC 189
K+ L++ G+ +S+ + V+GC+ + ++K+ +D +
Sbjct: 66 VEKILHTLDHM------------KGKRRSRPGLLVGVIGCVPQYYREKMFGMADGIDFLA 113
Query: 190 GPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 249
GPD YR LP ++ G +G + S +ETY I P R +++AF+ VMRGCNN C+
Sbjct: 114 GPDTYRQLPAMIANAGQGIRGADFGFSSDETYCGIEPAR--SGTISAFIPVMRGCNNRCA 171
Query: 250 FCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANW 309
FC+VPFTRG+ERSRP S++++V L G KE+TLLGQNVNSY+D
Sbjct: 172 FCVVPFTRGKERSRPFRSVLEDVGRLAASGYKEITLLGQNVNSYSDD------------- 218
Query: 310 RLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVC 369
+ C F +LLDR+++ +R R+T+ HPKD + L+ ++ R N+C
Sbjct: 219 ------EAACD-------FTELLDRVAVAAEGVRIRFTTSHPKDISESLVRVIAARNNIC 265
Query: 370 KYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHA 429
IHLP Q+G++ +L+ M RG+TRE Y + + IR IP V +S+D I GFCGET E+H
Sbjct: 266 NAIHLPVQSGSTRMLKLMNRGHTREEYFEKIAMIRSAIPGVTVSTDLIAGFCGETLEDHQ 325
Query: 430 DTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD 489
TL++M+ V +D AYMF YS+R T+A ++ DDVPEE K+RRL E+I +G+
Sbjct: 326 ATLSMMEDVRFDFAYMFYYSVRPGTYAAKHLPDDVPEEEKKRRLEEIIALQGSISGERNA 385
Query: 490 SQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
++VG V VL E +K++ + L+G++D V F
Sbjct: 386 AEVGAVVEVLAESESKRSSEM-LMGRTDTNRVVVF 419
>sp|Q3B6A6|MIAB_PELLD (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Pelodictyon luteolum (strain DSM 273) GN=miaB PE=3
SV=1
Length = 446
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 259/447 (57%), Gaps = 42/447 (9%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R Y +T+GCQMN D I+ ++ +AG+ + ++A+V+ +NTCA+R+ A K+ L
Sbjct: 6 RFYIQTFGCQMNEADSGIIARVLLDAGFRRA-DTEQDADVVLLNTCAVRENAVEKIAHLL 64
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
+ K+ +K + G VLGC+ + ++++ +D + GPD+YR L
Sbjct: 65 EHLKGAKKR-RKTLQVG-----------VLGCVPQHQREEMFSRFPAIDFIAGPDSYRRL 112
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTR 257
P L+++ + ETY I VR + ++AF+ VMRGCNNMC+FC+VPFTR
Sbjct: 113 PSLIDDAASAVRSAMLDFDPSETYVGIRQVR--EGRISAFIPVMRGCNNMCAFCVVPFTR 170
Query: 258 GRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNS 317
GRERS+P+ + E EL + G +E+TLLGQNVNSY+D +
Sbjct: 171 GRERSQPLAMVTGEARELAEAGYREITLLGQNVNSYSDPAS------------------- 211
Query: 318 MCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQ 377
G F+ LLD ++L P++R R+T+ HPKD L+ + RPN+C+++HLP Q
Sbjct: 212 -------GATFSALLDAVALAAPDVRIRFTTSHPKDISVGLIDTIARRPNICRHVHLPVQ 264
Query: 378 TGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKA 437
+G+ +VL RM RG+ YL+ ++ IR +P V LS+D I GFCGE EE+H TL L++
Sbjct: 265 SGSDSVLRRMNRGHGISEYLEKIRIIRDALPGVTLSTDIIAGFCGEREEDHRATLDLLRT 324
Query: 438 VGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQL 497
V +D A+MF YS RE T A R DDV E K+RRL E+I+ +E + + QVGTV
Sbjct: 325 VRFDAAFMFHYSTREGTLAARTLPDDVAETDKKRRLQEIIDLQQEISAENNRRQVGTVAE 384
Query: 498 VLVEGPNKKAPDTELVGKSDRGHRVAF 524
VL E ++++P L+G++D V F
Sbjct: 385 VLAESESRRSPG-RLLGRTDGNRAVVF 410
>sp|B3EGT4|MIAB_CHLL2 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Chlorobium limicola (strain DSM 245 / NBRC 103803)
GN=miaB PE=3 SV=1
Length = 442
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/448 (38%), Positives = 258/448 (57%), Gaps = 45/448 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y T+GCQMN D I+ ++++ GY + + E A +I +NTCA+R+ A ++ L
Sbjct: 7 KFYIHTFGCQMNQADSGIIAALLEQDGYQQA-SSEEEAGIIMLNTCAVRENAVERIAHYL 65
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ KR K P +V L GC+ + ++++ ++D + GPD YR
Sbjct: 66 QHVKGFKR-------------KCPELLVGLTGCIPQYRREELFTVFPVIDFLAGPDTYRV 112
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+ E G + + ETY ++ R S+TAFV +MRGCNNMC+FC+VPFT
Sbjct: 113 LPVLIAEAGKG-RAARLDFNPFETYDGVTQAR--TQSLTAFVPIMRGCNNMCAFCVVPFT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P S++ EV L + G +E+TLLGQNVNSY+D+
Sbjct: 170 RGRERSHPFGSVLDEVRALAESGCREITLLGQNVNSYHDS-------------------- 209
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
+ G F+ LLD +S E PE R R+T+ HPKD L+ M RPN+C ++HLP
Sbjct: 210 ------QSGADFSRLLDAVSREAPETRIRFTTSHPKDMSHSLVETMASRPNICNHLHLPV 263
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L RM RG+ E Y + ++ +R+ IP + LS+D I GFCGE++ +H TL LM+
Sbjct: 264 QSGSTRMLARMNRGHDIEDYRNKIELLRERIPGISLSTDLIAGFCGESDADHCQTLELMR 323
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D A+MF YS+R T A R DDVPEEVK++RL E+I+ + + +G+V
Sbjct: 324 EVRFDSAFMFYYSVRPGTLAARTMPDDVPEEVKKQRLQEIIDLQNGISAELLRLAIGSVV 383
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE ++++ D +L+G++ V F
Sbjct: 384 EVLVESESRRSSD-QLMGRTGGNRVVVF 410
>sp|A1BIX2|MIAB_CHLPD (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Chlorobium phaeobacteroides (strain DSM 266) GN=miaB
PE=3 SV=1
Length = 442
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/448 (38%), Positives = 255/448 (56%), Gaps = 45/448 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y T+GCQMN D I+ ++++ GY + + E A +I +NTCA+R+ A ++ L
Sbjct: 7 KFYIHTFGCQMNQADSGIITALLEKEGYQQAAS-EEEAGIIMLNTCAVRENAVERISHYL 65
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVL-GCMAERLKDKILDADKMVDVVCGPDAYRD 196
+ KR K P IV L GC+ + ++++ ++D + GPD YR
Sbjct: 66 QHVKGFKR-------------KCPELIVGLTGCIPQYRREELFTVFPVIDFLAGPDTYRV 112
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+ E + + ETY + R S+ AFV ++RGCNNMC+FC+VPFT
Sbjct: 113 LPALIAEAG-DSRSARLEFNAFETYDGVRQAR--TQSLNAFVPIIRGCNNMCAFCVVPFT 169
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRERS P ES++ EV L +G +E+TLLGQNVNSY+D +
Sbjct: 170 RGRERSHPFESVLDEVRALADDGCREITLLGQNVNSYHDPAS------------------ 211
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
G F+ LLD +S E PE R R+T+ HPKD L+ M RPN+C ++HLP
Sbjct: 212 --------GADFSRLLDAVSREAPETRIRFTTSHPKDMSHSLVETMALRPNICNHLHLPV 263
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q+G++ +L RM RG+ E Y + ++ +R+ IP + LS+D I GFCGE+E +H TL LM+
Sbjct: 264 QSGSTRMLARMNRGHDIEEYRNKIELLRKWIPGISLSTDLIAGFCGESEADHDQTLELMR 323
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
V +D +MF YS+R+ T A R DDVPEEVK++RL E+I+ + + G+V
Sbjct: 324 EVRFDSVFMFYYSVRQGTLAARTMPDDVPEEVKKQRLQEIIDLQNGISAELLGLAPGSVV 383
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVE ++++ D +L+G++D V F
Sbjct: 384 EVLVESESRRSSD-QLMGRTDGNRVVVF 410
>sp|B1KSA4|MIAB_CLOBM (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Clostridium botulinum (strain Loch Maree / Type A3)
GN=miaB PE=3 SV=1
Length = 450
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 174/456 (38%), Positives = 260/456 (57%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
++++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINAIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV I + E++ + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSILKIQEKEDSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEDEIKKLISEGYKEITLLGQNVNSYG------KDLEPK-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FADLL+R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFADLLERVNTIDGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVVNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>sp|B1IM69|MIAB_CLOBK (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Clostridium botulinum (strain Okra / Type B1) GN=miaB
PE=3 SV=1
Length = 450
Score = 295 bits (754), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 260/456 (57%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
++++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINAIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV + + E++ + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSVLKIQEKEDSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEDEIKKLISEGYKEITLLGQNVNSYG------KDLEPK-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL+R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLERVNTIDGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVVNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>sp|A7GE46|MIAB_CLOBL (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Clostridium botulinum (strain Langeland / NCTC 10281
/ Type F) GN=miaB PE=3 SV=1
Length = 450
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 259/456 (56%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
++++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINTIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV + + E++ + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSVLKIQEKEDSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEAEIKKLISEGYKEITLLGQNVNSYG------KDLEPN-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVVNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>sp|B1I241|MIAB_DESAP (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Desulforudis audaxviator (strain MP104C) GN=miaB PE=3
SV=1
Length = 443
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/448 (39%), Positives = 253/448 (56%), Gaps = 43/448 (9%)
Query: 79 IYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLN 138
++ T+GCQMN D E++ +++ GY ++ E A+++ INTC +R+ AE++VW L
Sbjct: 8 VHTITFGCQMNEFDSELMTGLLEGMGYEPAKSLRE-ADLVLINTCCVRESAENRVWGLLG 66
Query: 139 YFWFLKREWKKNVATGRSQSKHPPKIVVLGCMA--ERLKDKILDADKMVDVVCGPDAYRD 196
KR+ + + + V GC+ E ++I+ +VD+V G +
Sbjct: 67 SLKRYKRDKPELI------------VAVSGCLPQQEGTAEEIIRRFPVVDLVLGTHNRHE 114
Query: 197 LPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 256
LP L+EEV G++ + + + + PVR K+ + A+V V+ GCNN C++C+VP+
Sbjct: 115 LPGLIEEVRAGRRPVLGVRQPDSAVPEGLPVR-RKSGLRAWVPVIHGCNNFCTYCVVPYV 173
Query: 257 RGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFN 316
RGRE SR +++V EV L G +EVTLLGQNVNSY G
Sbjct: 174 RGRECSRRPDAVVDEVCGLAAAGYREVTLLGQNVNSYGRDLGE----------------- 216
Query: 317 SMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPA 376
G+ FA LL RL R R+T+ HP+DF D L+ ++ VC++IHLPA
Sbjct: 217 --------GIDFAALLARLDGVEGLWRIRFTTSHPRDFTDRLIEVVARAAKVCEHIHLPA 268
Query: 377 QTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMK 436
Q G++ VL+RM RGYTRE YLDLV +IR +PDV L++D + GF GETEE+ ADTL L++
Sbjct: 269 QAGSNRVLQRMNRGYTREDYLDLVARIRAAVPDVSLTTDLMVGFPGETEEDFADTLDLVR 328
Query: 437 AVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQ 496
VGYD A+ F Y+ R T A + D VPE+VK RR+ ELI+ +E ++ G V
Sbjct: 329 RVGYDQAFTFVYNPRRGTPAA-GWPDQVPEDVKSRRIQELIQVQKEIGLARNRAEEGKVL 387
Query: 497 LVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+ PD L G+S V F
Sbjct: 388 EVLVEGPSATRPDL-LSGRSRTNKTVVF 414
>sp|A5I2S3|MIAB_CLOBH (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC
13319 / Type A) GN=miaB PE=3 SV=1
Length = 450
Score = 292 bits (748), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 257/456 (56%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINVIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV + + E + + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSVLKIQEKENSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEAEIKKLISEGYKEITLLGQNVNSYG------KDLEPN-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVLNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>sp|A7FUL1|MIAB_CLOB1 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Clostridium botulinum (strain ATCC 19397 / Type A)
GN=miaB PE=3 SV=1
Length = 450
Score = 292 bits (748), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/456 (37%), Positives = 257/456 (56%), Gaps = 45/456 (9%)
Query: 72 EVHSQGRIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEH 131
+++ G + ET+GCQMN D E + ++K GY ENA+VI NTC +R+ AE
Sbjct: 9 DINVIGEFFIETWGCQMNEEDSEKLSGMLKKEGYIRT-EERENADVIIFNTCCVRENAEL 67
Query: 132 KVWQRLNYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMAER--LKDKILDADKMVDVV 188
KV+ L LK SK+P I+ V GCM ++ + + I VD++
Sbjct: 68 KVYGNLGILKGLK-------------SKNPNLIIAVTGCMMQQKGMAETIKKKFPFVDII 114
Query: 189 CGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMC 248
G + P L EV + + E + + P+ KNS+ AFV++M GCNN C
Sbjct: 115 IGTHNLHNFPNYLNEVKKKDTSVLKIQEKENSIIENMPID-RKNSMKAFVTIMYGCNNFC 173
Query: 249 SFCIVPFTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGAN 308
++CIVP+ RGRERSR E+I E+ +L EG KE+TLLGQNVNSY K++EP
Sbjct: 174 TYCIVPYVRGRERSRTPENIEAEIKKLISEGYKEITLLGQNVNSYG------KDLEPN-- 225
Query: 309 WRLSEGFNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNV 368
+ FA+LL R++ R R+ + HPKD D+++ + +
Sbjct: 226 -----------------VTFAELLKRVNNIEGLERVRFMTSHPKDLTDDVIEAIAKCDKL 268
Query: 369 CKYIHLPAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEH 428
C+ IHLP Q+G+S +L++M R Y RE YLD+V KI+++IP+V LS+D I GF GETE++
Sbjct: 269 CEQIHLPVQSGSSEILKKMNRHYDREKYLDVVSKIKKLIPNVALSTDIIVGFPGETEKDF 328
Query: 429 ADTLTLMKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCY 488
+TL+L+K V YD A+ F YS+R+ T A + + D VPE+VK +R L+E E + +
Sbjct: 329 EETLSLVKEVEYDSAFTFLYSIRKGTPAAK-FEDQVPEDVKHKRFNRLVEVLNEISAKKN 387
Query: 489 DSQVGTVQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
+ G ++ VLVEG +K + +L+G++ G V F
Sbjct: 388 KAYEGKIEEVLVEGTSKN-DENKLMGRTRTGKLVNF 422
>sp|B2IIK5|MIAB_BEII9 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Beijerinckia indica subsp. indica (strain ATCC 9039 /
DSM 1715 / NCIB 8712) GN=miaB PE=3 SV=1
Length = 510
Score = 292 bits (747), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 250/443 (56%), Gaps = 39/443 (8%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+++ ++YGCQMNV D E + ++ GY+E + PE+A+++ +NTC IR++A KV+ L
Sbjct: 35 KLFVKSYGCQMNVYDAERMADLLAPEGYAET-SAPEDADLVILNTCHIREHAAEKVFSEL 93
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 197
LK E + A GR P KIVV GC+A+ ++IL K VD+V GP +Y L
Sbjct: 94 GKLRLLKAEQQ---AAGR-----PVKIVVAGCVAQAEGEEILRRQKAVDLVVGPQSYHRL 145
Query: 198 PRLLEEVDYGQKGINTLLSLEETYADI---SPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
P LL V + ++T E+ + + P +I++ V AFV+V GC+ CSFC+VP
Sbjct: 146 PDLLRRVAHTPGLVDTEFPAEDKFDHLVAPQPEKIAERGVGAFVTVQEGCDKFCSFCVVP 205
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG E SRPVE+I+ EV+ L GV+EVTL+GQNVN+Y+ G
Sbjct: 206 YTRGAETSRPVEAILAEVETLIASGVREVTLIGQNVNAYH-------------------G 246
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F++M A L+ R++ +R RYT+ HP D ++L+ RD P + ++HL
Sbjct: 247 FDAMTGAPA---SLASLMARVAAMPGLLRIRYTTSHPNDMGEDLIAAHRDIPALMPFLHL 303
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G+ +L M R + YL+L+ IR PD+ LSSDFI GF GETE + TL L
Sbjct: 304 PVQSGSDKILAAMNRRHKAGDYLELIASIRAARPDIALSSDFIVGFPGETEADFEATLAL 363
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYD-SQVG 493
++ VG+ A+ F YS R T + D + E+VK +RL L +A E Q ++ + +G
Sbjct: 364 IEQVGFASAFSFKYSQRPGTPG-ADRPDQIDEDVKAQRLARL-QALLEEQRQAFNKAMIG 421
Query: 494 TVQLVLVEGPNKKAPDTELVGKS 516
V VL E P + ++ GK+
Sbjct: 422 RVLPVLFEKPGRHP--GQIAGKT 442
>sp|Q8XLE9|MIAB_CLOPE (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Clostridium perfringens (strain 13 / Type A) GN=miaB
PE=3 SV=1
Length = 447
Score = 288 bits (736), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 249/445 (55%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN D E + ++K+ GY N E A +I NTC +R+ AE+KV+ L
Sbjct: 16 TYGCQMNEEDSEKLSGMLKSQGYERTEN-KEEASIIIFNTCCVRENAENKVFGNLGQLKQ 74
Query: 143 LKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK+ K+P ++ + GCM ++ + DK+L VD++ G P
Sbjct: 75 LKK-------------KNPNLVIAICGCMMQQVGMADKVLKTFPYVDIIFGTHNAHKFPE 121
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L V + +L+ EE + P+ K+ V AFV++M GCNN C++CIVP+ RGR
Sbjct: 122 YLHRVLQEGVQVKEILNKEEGIVEGLPID-RKSDVKAFVTIMYGCNNFCTYCIVPYVRGR 180
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+KE++EL +G KE+TLLGQNVNSY G+E++++
Sbjct: 181 ERSRKSEDIIKEIEELVSQGYKEITLLGQNVNSYG--KGLEEDID--------------- 223
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
FA LL +++ R R+ + HPKD D+++ +++ +C+ +HLP Q+G
Sbjct: 224 --------FAGLLRKVNEVKGLERVRFMTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSG 275
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S +L+ M R Y RE YLDLV+KI+ IPDV L++D I GF GETEE+ DTL+L + VG
Sbjct: 276 SSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVG 335
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
YD A+ F YS R T A + + +P+++K R L+EA + G V VL
Sbjct: 336 YDSAFTFIYSRRNHTPADK-MENQIPDDIKHDRFNRLVEAINKKVVIKNKEYEGKVVEVL 394
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEGP+K +T+L G++ G V F
Sbjct: 395 VEGPSKN-DETKLTGRTRNGKLVNF 418
>sp|Q0TRE5|MIAB_CLOP1 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=miaB PE=3 SV=1
Length = 447
Score = 288 bits (736), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 249/445 (55%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN D E + ++K+ GY N E A +I NTC +R+ AE+KV+ L
Sbjct: 16 TYGCQMNEEDSEKLSGMLKSQGYERTEN-KEEASIIIFNTCCVRENAENKVFGNLGQLKQ 74
Query: 143 LKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK+ K+P ++ + GCM ++ + DK+L VD++ G P
Sbjct: 75 LKK-------------KNPNLVIAICGCMMQQVGMADKVLKTFPYVDIIFGTHNAHKFPE 121
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L V + +L+ EE + P+ K+ V AFV++M GCNN C++CIVP+ RGR
Sbjct: 122 YLHRVLQEGVQVKEILNKEEGIVEGLPID-RKSDVKAFVTIMYGCNNFCTYCIVPYVRGR 180
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+KE++EL +G KE+TLLGQNVNSY G+E++++
Sbjct: 181 ERSRKSEDIIKEIEELVSQGYKEITLLGQNVNSYG--KGLEEDID--------------- 223
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
FA LL +++ R R+ + HPKD D+++ +++ +C+ +HLP Q+G
Sbjct: 224 --------FAGLLRKVNEVKGLERVRFMTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSG 275
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S +L+ M R Y RE YLDLV+KI+ IPDV L++D I GF GETEE+ DTL+L + VG
Sbjct: 276 SSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVG 335
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
YD A+ F YS R T A + + +P+++K R L+EA + G V VL
Sbjct: 336 YDSAFTFIYSRRNHTPADK-MENQIPDDIKHDRFNRLVEAINKKVVIKNKEYEGKVVEVL 394
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEGP+K +T+L G++ G V F
Sbjct: 395 VEGPSKN-DETKLTGRTRNGKLVNF 418
>sp|Q0STS9|MIAB_CLOPS (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Clostridium perfringens (strain SM101 / Type A)
GN=miaB PE=3 SV=1
Length = 447
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/445 (37%), Positives = 249/445 (55%), Gaps = 45/445 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN D E + ++K+ GY N E A +I NTC +R+ AE+KV+ L
Sbjct: 16 TYGCQMNEEDSEKLSGMLKSQGYERTEN-KEEASIIIFNTCCVRENAENKVFGNLGQLKQ 74
Query: 143 LKREWKKNVATGRSQSKHPPKIVVL-GCMAER--LKDKILDADKMVDVVCGPDAYRDLPR 199
LK+ K+P ++ + GCM ++ + DK+L VD++ G P
Sbjct: 75 LKK-------------KNPNLVIAICGCMMQQVGMADKVLKTFPYVDIIFGTHNAHKFPE 121
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L V + +L+ EE + P+ K+ V AFV++M GCNN C++CIVP+ RGR
Sbjct: 122 YLHRVLQEGVQVKEILNKEEGIVEGLPID-RKSDVKAFVTIMYGCNNFCTYCIVPYVRGR 180
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR E I+KE++EL +G KE+TLLGQNVNSY G+E++++
Sbjct: 181 ERSRKSEDIIKEIEELVSKGYKEITLLGQNVNSYG--KGLEEDID--------------- 223
Query: 320 KVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQTG 379
FA LL +++ R R+ + HPKD D+++ +++ +C+ +HLP Q+G
Sbjct: 224 --------FAGLLRKVNEVKGLERVRFMTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSG 275
Query: 380 NSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAVG 439
+S +L+ M R Y RE YLDLV+KI+ IPDV L++D I GF GETEE+ DTL+L + VG
Sbjct: 276 SSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVG 335
Query: 440 YDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLVL 499
YD A+ F YS R T A + + +P+++K R L+EA + G V VL
Sbjct: 336 YDSAFTFIYSRRNHTPADK-MENQIPDDIKHDRFNRLVEAINKKVVIKNKEYEGKVVEVL 394
Query: 500 VEGPNKKAPDTELVGKSDRGHRVAF 524
VEGP+K +T+L G++ G V F
Sbjct: 395 VEGPSKN-DETKLTGRTRNGKLVNF 418
>sp|Q8EQR4|MIAB_OCEIH (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM
11309 / KCTC 3954 / HTE831) GN=miaB PE=3 SV=1
Length = 519
Score = 286 bits (732), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 257/446 (57%), Gaps = 47/446 (10%)
Query: 83 TYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRLNYFWF 142
TYGCQMN +D E++ I+ GY E V E A++I +NTCAIR+ AE+KV+ + +
Sbjct: 82 TYGCQMNEHDTEVMAGILSEMGY-ESTTVTEEADIILLNTCAIRENAENKVFGEIGHLKP 140
Query: 143 LKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAYRDLPR 199
LK E +P I+ V GCM+ E + D+IL + +D++ G LP
Sbjct: 141 LKLE-------------NPDLIIGVCGCMSQEESVVDRILQKHQHIDLIFGTHNIHRLPH 187
Query: 200 LLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 259
L++E +G++ I + S E + P + K + A+V++M GC+ C++CIVP TRG+
Sbjct: 188 LVKEALFGKEMIVEVWSKEGDIIENLP-KARKGKIKAWVNIMYGCDKFCTYCIVPMTRGK 246
Query: 260 ERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEGFNSMC 319
ERSR + I++EV L +G +EVTLLGQNVN+Y +++E G
Sbjct: 247 ERSRRPKDIIQEVRHLVAQGYQEVTLLGQNVNAYGKDF---EDIEYG------------- 290
Query: 320 KVKKMGLRFADLLDRL-SLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHLPAQT 378
DL++ + ++ P R R+T+ HP+DF D L+ ++ N+ +IHLP Q+
Sbjct: 291 --------LGDLMNDIHKIDIP--RVRFTTSHPRDFDDRLIEVLAQGGNLLDHIHLPVQS 340
Query: 379 GNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTLMKAV 438
G+S +L++M R YTRE YL+LV+KIR +P+ L++D I GF ETEE+ +T+TL++ V
Sbjct: 341 GSSEILKKMNRKYTREEYLELVRKIRIAMPNATLTTDIIVGFPNETEEQFEETMTLVEEV 400
Query: 439 GYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGTVQLV 498
G++ AY F YS RE T A R DDVPEEVK++RL L E + + G V
Sbjct: 401 GFEAAYTFIYSPREGTPAARKK-DDVPEEVKKQRLYRLNELVNKQSAASMKDYAGKKVKV 459
Query: 499 LVEGPNKKAPDTELVGKSDRGHRVAF 524
LVEG +KK P+ L G +++ V F
Sbjct: 460 LVEGESKKDPEV-LAGYTEKNKLVNF 484
>sp|A0Q0M5|MIAB_CLONN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Clostridium novyi (strain NT) GN=miaB PE=3 SV=1
Length = 452
Score = 284 bits (727), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 169/450 (37%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
R + T+GCQMN D E + ++K GY+ ++ + A+V+ NTC +R+ AE KV+ L
Sbjct: 17 RFFISTWGCQMNEEDSEKISGLLKGIGYTRT-DIRDEADVVIFNTCCVRENAEQKVYGHL 75
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKI-VVLGCMAER--LKDKILDADKMVDVVCGPDAY 194
LKR K+P I +V GCM ++ + +K+++ VD++ G
Sbjct: 76 GELKALKR-------------KNPNLILIVTGCMMQQKGMPEKVMEKFPHVDIIAGTYNS 122
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +E V I + E+ + PV K+ + AFV++M GCNN CS+CIVP
Sbjct: 123 YKLPEYIERVKTEGNSIIEIWDKEKGIVEGLPVD-RKSDIKAFVTIMYGCNNFCSYCIVP 181
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+ RGRERSR ++I+ E+ +L +G KE+TLLGQNVNSY G+E E+
Sbjct: 182 YVRGRERSRDPQNIIDEIKDLVSKGYKEITLLGQNVNSYG--KGLEPEI----------N 229
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F ++ LR + +D L R R+ + HPKD DEL+ M + VC+ H
Sbjct: 230 FATL-------LRMVNKIDGLE------RIRFMTSHPKDVSDELIKAMAECEKVCEQGHF 276
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
Q+G++ +L++M R YTRE YL LV+K+R+ +P+VG+S+D I G+ GETE++ DTL++
Sbjct: 277 ALQSGSTEILQKMNRKYTREDYLTLVKKLRKAMPNVGISTDIIIGYPGETEKDFEDTLSI 336
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+K + +D A+ F YS RE T A + D VPE+VK R +L+EA E + G
Sbjct: 337 VKEIEFDSAFTFIYSKREGTPAAK-LEDQVPEDVKHTRFNKLVEAVNEIMARKNKEFEGK 395
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
VLVEGP+K DT+L+G++ G V F
Sbjct: 396 TVEVLVEGPSKN-DDTKLMGRTRSGKLVNF 424
>sp|A4IMH7|MIAB_GEOTN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=miaB PE=3 SV=2
Length = 523
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 257/450 (57%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE+A VI +NTCAIR+ AE+KV+ L
Sbjct: 81 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDRPEDANVILLNTCAIRENAENKVFGEL 139
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
Y LK + +P ++ V GCM+ E + +KIL + VD++ G
Sbjct: 140 GYLKPLK-------------TTNPDLLLGVCGCMSQEEAVVNKILKQYQYVDLIFGTHNI 186
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L E ++ + + S E + P ++ K ++ A+V++M GC+ C++CIVP
Sbjct: 187 HRLPYILHEAYMSKEMVVEVWSKEGDVVENLP-KVRKGNIKAWVNIMYGCDKFCTYCIVP 245
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++EV +L +G KE+TLLGQNVN+Y +
Sbjct: 246 YTRGKERSRRPEDIIQEVRQLAAQGYKEITLLGQNVNAY------------------GKD 287
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
FN + + GL DL+D L + R R+T+ HP+DF D L+ ++ R N+ ++IHL
Sbjct: 288 FNDI----QYGL--GDLMDELR-KIDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHL 340
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE YL+LV+KI+ IPDV L++D I GF ET+E+ +TL+L
Sbjct: 341 PVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETDEQFEETLSL 400
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A + D+VP EVK+ RL L +E + G
Sbjct: 401 YREVEFDSAYTFIYSPREGTPAAK-MNDNVPMEVKKERLQRLNALVQEIAAKKMKQYEGQ 459
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K PD L G + + V F
Sbjct: 460 VVEVLVEGESKTNPDV-LAGYTRKNKLVHF 488
>sp|Q5L0E8|MIAB_GEOKA (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Geobacillus kaustophilus (strain HTA426) GN=miaB PE=3
SV=1
Length = 531
Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 254/450 (56%), Gaps = 45/450 (10%)
Query: 78 RIYQETYGCQMNVNDMEIVLSIMKNAGYSEVINVPENAEVIFINTCAIRDYAEHKVWQRL 137
+ Y TYGCQMN +D E++ I GY E + PE A VI +NTCAIR+ AE+KV+ L
Sbjct: 81 KFYIRTYGCQMNEHDTEVMAGIFMALGY-EPTDRPEEANVILLNTCAIRENAENKVFGEL 139
Query: 138 NYFWFLKREWKKNVATGRSQSKHPPKIV-VLGCMA--ERLKDKILDADKMVDVVCGPDAY 194
Y LK + +P ++ V GCM+ E + KIL + VD++ G
Sbjct: 140 GYLKPLK-------------TTNPDLLLGVCGCMSQEESVVKKILKQYQYVDLIFGTHNI 186
Query: 195 RDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 254
LP +L E ++ + + S E + P ++ K + A+V++M GC+ C++CIVP
Sbjct: 187 HRLPYILHEAYMSKEMVVEVWSKEGDVVENLP-KVRKGKIKAWVNIMYGCDKFCTYCIVP 245
Query: 255 FTRGRERSRPVESIVKEVDELWKEGVKEVTLLGQNVNSYNDTSGMEKEVEPGANWRLSEG 314
+TRG+ERSR E I++EV +L +G KE+TLLGQNVN+Y +
Sbjct: 246 YTRGKERSRRPEDIIQEVRQLAAQGYKEITLLGQNVNAY------------------GKD 287
Query: 315 FNSMCKVKKMGLRFADLLDRLSLEFPEMRFRYTSPHPKDFPDELLYIMRDRPNVCKYIHL 374
F + + GL DL+D L + R R+T+ HP+DF D L+ ++ R N+ ++IHL
Sbjct: 288 FTDI----QYGL--GDLMDELR-KIDIARIRFTTSHPRDFDDRLIEVLAKRGNLVEHIHL 340
Query: 375 PAQTGNSAVLERMRRGYTREAYLDLVQKIRQIIPDVGLSSDFICGFCGETEEEHADTLTL 434
P Q+G++ +L+ M R YTRE YL+LV+KI+ IPDV L++D I GF ET+E+ +TL+L
Sbjct: 341 PVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVALTTDIIVGFPNETDEQFEETLSL 400
Query: 435 MKAVGYDMAYMFAYSMRERTHAHRNYVDDVPEEVKQRRLTELIEAFRESTGQCYDSQVGT 494
+ V +D AY F YS RE T A N D+VP EVK+ RL L + +E + G
Sbjct: 401 YREVEFDSAYTFIYSPREGTPAA-NMKDNVPMEVKKERLKRLNDLVQEIAAKKMKQYEGQ 459
Query: 495 VQLVLVEGPNKKAPDTELVGKSDRGHRVAF 524
V VLVEG +K PD L G + + V F
Sbjct: 460 VVEVLVEGESKTNPDV-LAGYTRKNKLVHF 488
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,450,789
Number of Sequences: 539616
Number of extensions: 8350352
Number of successful extensions: 27374
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 22501
Number of HSP's gapped (non-prelim): 1364
length of query: 524
length of database: 191,569,459
effective HSP length: 122
effective length of query: 402
effective length of database: 125,736,307
effective search space: 50545995414
effective search space used: 50545995414
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)