BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041525
PTYSRKLSRVRCNVENSSTKGEPEPRNALLKIAWYGSELLGIAASFLRSPSPSDVENDLK
LATDGSGAAELDRATVVEAIKEDFARSYFVTGNITLDAYEEDCEFADPAGSFKGLRRFKR
NCTNFGLLIDKSNMNLTRWDDFEDKGIGHWRFNCIMSFPWRPILSATGYTEYYFNAETGR
VCRHVEHWNVPKMALFKQILRPSRVGRRKSGG

High Scoring Gene Products

Symbol, full name Information P value
AT2G46100 protein from Arabidopsis thaliana 2.2e-73
AT3G04890 protein from Arabidopsis thaliana 5.6e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041525
        (212 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2062989 - symbol:AT2G46100 "AT2G46100" species...   741  2.2e-73   1
TAIR|locus:2114875 - symbol:AT3G04890 "AT3G04890" species...   171  5.6e-13   1


>TAIR|locus:2062989 [details] [associations]
            symbol:AT2G46100 "AT2G46100" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002685
            GenomeReviews:CT485783_GR InterPro:IPR018790 Pfam:PF10184
            UniGene:At.48599 UniGene:At.66444 EMBL:BT014789 EMBL:BT015018
            IPI:IPI00526559 RefSeq:NP_182134.2 ProteinModelPortal:Q6ID84
            STRING:Q6ID84 PRIDE:Q6ID84 ProMEX:Q6ID84 EnsemblPlants:AT2G46100.1
            GeneID:819218 KEGG:ath:AT2G46100 TAIR:At2g46100
            HOGENOM:HOG000240965 InParanoid:Q6ID84 OMA:ATGYTEY
            ProtClustDB:CLSN2680274 Genevestigator:Q6ID84 Uniprot:Q6ID84
        Length = 240

 Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
 Identities = 134/190 (70%), Positives = 158/190 (83%)

Query:    15 ENSSTKGEPEPRNALLKIAWYGSELLGIAASFLRSPSPSDVENDLKLATDGSGAAELDRA 74
             E  ++KG PEP N LLKIAWYGSELLGIAAS  RSP  S +    ++  D SG A   R 
Sbjct:    47 EPQTSKG-PEPDNVLLKIAWYGSELLGIAASVFRSPETSPIVTGFEVPVDCSGRAV--RV 103

Query:    75 TVVEAIKEDFARSYFVTGNITLDAYEEDCEFADPAGSFKGLRRFKRNCTNFGLLIDKSNM 134
              VV++IK+DF RSYFVTGN+T + YEE CEFADPAGSFKGL RFKRNCTNFG LI+KSNM
Sbjct:   104 AVVDSIKQDFKRSYFVTGNLTPEVYEEKCEFADPAGSFKGLARFKRNCTNFGSLIEKSNM 163

Query:   135 NLTRWDDFEDKGIGHWRFNCIMSFPWRPILSATGYTEYYFNAETGRVCRHVEHWNVPKMA 194
              L +W++FEDKGIGHW+F+C+MSFPW+PILSATGYTEYYF+ E+G++CRHVEHWNVPK+A
Sbjct:   164 KLMKWENFEDKGIGHWKFSCVMSFPWKPILSATGYTEYYFDTESGKICRHVEHWNVPKIA 223

Query:   195 LFKQILRPSR 204
             LFKQ+LRPSR
Sbjct:   224 LFKQLLRPSR 233


>TAIR|locus:2114875 [details] [associations]
            symbol:AT3G04890 "AT3G04890" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 EMBL:AC009465 InterPro:IPR018790
            Pfam:PF10184 EMBL:AK318619 IPI:IPI00892084 RefSeq:NP_001118575.1
            UniGene:At.19068 ProteinModelPortal:B3H4P9 STRING:B3H4P9
            PaxDb:B3H4P9 PRIDE:B3H4P9 EnsemblPlants:AT3G04890.2 GeneID:819649
            KEGG:ath:AT3G04890 TAIR:At3g04890 eggNOG:NOG13822
            HOGENOM:HOG000012487 OMA:NYILATW PhylomeDB:B3H4P9
            ProtClustDB:CLSN2688075 Genevestigator:B3H4P9 Uniprot:B3H4P9
        Length = 221

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 44/158 (27%), Positives = 77/158 (48%)

Query:    21 GEPEPRN-ALLKIAWYG-SELLGIAASFLRSPSPSDVENDLKLATDGSGAAELDRATVVE 78
             G PE +  A+LK A  G +E L + +    +PS + +  +   + +   A ++D   V+ 
Sbjct:    28 GSPEKKTPAVLKWAVSGVTEFLRLISG---APSSTSIATNKDRSKNEVTAGDVD--DVMG 82

Query:    79 AIKEDFARSYFVTGNITLDAYEEDCEFADPAGSFKGLRRFKRNCTNFGLLIDKSNMNLTR 138
              ++ D+   YFVTG +T   Y +DC F DP  SF+G   ++RN       ++ +++ L  
Sbjct:    83 ILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDASIELQN 142

Query:   139 WDDFEDKG----IGHWRFNCIMSFPWRPILSATGYTEY 172
              +  E       +  W+    +  PWRP++S  G T Y
Sbjct:   143 MEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVY 180


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      212       212   0.00083  112 3  11 22  0.37    33
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  195 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.15u 0.08s 17.23t   Elapsed:  00:00:01
  Total cpu time:  17.15u 0.08s 17.23t   Elapsed:  00:00:01
  Start:  Fri May 10 17:42:42 2013   End:  Fri May 10 17:42:43 2013

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