Query 041526
Match_columns 252
No_of_seqs 294 out of 2197
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 13:32:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041526.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041526hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ded_A Probable hemolysin; str 99.9 1.8E-21 6.2E-26 153.7 11.3 92 91-215 16-111 (113)
2 3llb_A Uncharacterized protein 99.8 9.4E-21 3.2E-25 141.5 11.4 81 109-217 2-82 (83)
3 2pli_A Uncharacterized protein 99.8 8.3E-21 2.8E-25 144.1 11.2 80 109-216 11-90 (91)
4 2r2z_A Hemolysin; APC85144, en 99.8 1.1E-20 3.7E-25 143.8 10.5 82 109-216 9-90 (93)
5 3lae_A UPF0053 protein HI0107; 99.8 1.8E-20 6.2E-25 139.3 11.3 80 109-216 2-81 (81)
6 2pls_A CBS domain protein; APC 99.8 4.8E-20 1.6E-24 138.3 11.7 81 109-216 2-85 (86)
7 2p4p_A Hypothetical protein HD 99.8 3.3E-20 1.1E-24 139.3 10.8 81 110-217 3-84 (86)
8 2oai_A Hemolysin; PFAM03471, x 99.8 3.7E-20 1.3E-24 141.4 11.0 81 109-216 11-93 (94)
9 2p13_A CBS domain; alpha-beta 99.8 3.8E-20 1.3E-24 140.1 10.0 81 109-216 8-89 (90)
10 2o3g_A Putative protein; APC85 99.8 4.2E-20 1.5E-24 140.3 9.7 80 110-216 11-91 (92)
11 2rk5_A Putative hemolysin; str 99.8 1.8E-19 6.2E-24 135.5 11.8 78 110-215 2-85 (87)
12 2nqw_A CBS domain protein; PFA 99.8 4.8E-19 1.6E-23 134.8 10.3 78 109-215 8-91 (93)
13 2p3h_A Uncharacterized CBS dom 99.7 1.8E-18 6.1E-23 134.0 6.5 81 109-218 5-90 (101)
14 3lfr_A Putative metal ION tran 99.7 2.8E-17 9.4E-22 130.4 7.6 96 1-98 39-134 (136)
15 3hf7_A Uncharacterized CBS-dom 99.7 1.1E-16 3.9E-21 126.0 8.8 92 1-93 38-129 (130)
16 3lhh_A CBS domain protein; str 99.7 2.5E-16 8.6E-21 129.9 10.7 94 1-98 78-171 (172)
17 3ocm_A Putative membrane prote 99.7 2.3E-16 7.8E-21 131.3 9.3 94 1-99 72-165 (173)
18 3oco_A Hemolysin-like protein 99.6 2.6E-16 8.8E-21 126.9 7.5 95 1-99 56-151 (153)
19 3jtf_A Magnesium and cobalt ef 99.6 7.6E-16 2.6E-20 120.8 8.9 88 1-93 41-128 (129)
20 3i8n_A Uncharacterized protein 99.6 1.5E-15 5E-20 119.1 9.5 89 1-92 42-130 (130)
21 3lv9_A Putative transporter; C 99.6 1.9E-15 6.3E-20 120.9 9.7 90 1-94 59-148 (148)
22 3nqr_A Magnesium and cobalt ef 99.6 2.2E-15 7.5E-20 117.6 8.5 89 1-92 39-127 (127)
23 3k6e_A CBS domain protein; str 99.5 2.3E-14 7.8E-19 117.2 8.2 92 1-95 51-146 (156)
24 3oi8_A Uncharacterized protein 99.5 4.1E-14 1.4E-18 114.7 6.3 83 1-87 74-156 (156)
25 3kpb_A Uncharacterized protein 99.4 1.3E-12 4.6E-17 100.1 9.5 86 1-91 35-120 (122)
26 2yzi_A Hypothetical protein PH 99.4 2.1E-12 7E-17 101.3 9.2 93 1-96 41-134 (138)
27 3kxr_A Magnesium transporter, 99.4 1.3E-12 4.6E-17 111.5 8.4 87 1-94 91-177 (205)
28 3gby_A Uncharacterized protein 99.4 1.3E-12 4.5E-17 101.7 7.4 88 1-91 39-126 (128)
29 2ef7_A Hypothetical protein ST 99.4 3.6E-12 1.2E-16 99.3 9.9 90 1-93 38-127 (133)
30 1pbj_A Hypothetical protein; s 99.3 3.9E-12 1.3E-16 97.7 9.7 88 1-91 35-122 (125)
31 2nyc_A Nuclear protein SNF4; b 99.3 4.8E-12 1.6E-16 99.3 10.0 90 1-91 45-141 (144)
32 1y5h_A Hypothetical protein RV 99.3 1.9E-12 6.6E-17 100.8 7.4 89 1-91 42-131 (133)
33 2rih_A Conserved protein with 99.3 3.6E-12 1.2E-16 100.6 9.0 88 1-91 39-128 (141)
34 3fhm_A Uncharacterized protein 99.3 3.6E-12 1.2E-16 103.7 9.1 94 1-96 61-155 (165)
35 1pvm_A Conserved hypothetical 99.3 2.8E-12 9.5E-17 106.3 8.1 94 1-95 43-138 (184)
36 2yvy_A MGTE, Mg2+ transporter 99.3 2.4E-12 8.3E-17 114.2 8.3 87 1-94 174-260 (278)
37 2p9m_A Hypothetical protein MJ 99.3 5.1E-12 1.7E-16 98.9 9.2 91 1-93 42-138 (138)
38 2uv4_A 5'-AMP-activated protei 99.3 9.6E-12 3.3E-16 99.7 10.4 89 1-90 55-150 (152)
39 4gqw_A CBS domain-containing p 99.3 4.1E-12 1.4E-16 100.4 8.0 92 1-93 41-145 (152)
40 3fv6_A YQZB protein; CBS domai 99.3 7.7E-12 2.6E-16 101.1 9.7 90 1-91 50-144 (159)
41 3lqn_A CBS domain protein; csg 99.3 9.6E-12 3.3E-16 99.0 9.7 91 1-94 51-146 (150)
42 3ctu_A CBS domain protein; str 99.3 9E-12 3.1E-16 99.9 9.1 92 1-95 51-146 (156)
43 2rc3_A CBS domain; in SITU pro 99.3 1.8E-11 6E-16 95.7 10.3 89 1-92 43-132 (135)
44 2o16_A Acetoin utilization pro 99.3 1.6E-11 5.4E-16 99.5 10.3 91 1-93 39-137 (160)
45 4esy_A CBS domain containing m 99.3 3.5E-12 1.2E-16 104.4 6.0 90 1-92 52-163 (170)
46 4fry_A Putative signal-transdu 99.3 2.3E-11 7.9E-16 97.6 10.4 94 1-97 47-141 (157)
47 1o50_A CBS domain-containing p 99.3 2.4E-11 8.2E-16 97.8 10.1 90 1-93 51-155 (157)
48 2emq_A Hypothetical conserved 99.3 2.1E-11 7.1E-16 97.5 9.5 92 1-95 47-143 (157)
49 3sl7_A CBS domain-containing p 99.3 1.2E-11 4.2E-16 100.7 8.1 94 1-95 40-160 (180)
50 3k2v_A Putative D-arabinose 5- 99.2 1.6E-11 5.4E-16 98.1 7.6 85 1-87 64-148 (149)
51 3t4n_C Nuclear protein SNF4; C 99.2 2.7E-11 9.3E-16 108.0 9.7 91 1-92 224-321 (323)
52 2j9l_A Chloride channel protei 99.2 2.7E-11 9.1E-16 99.3 8.7 93 1-94 51-168 (185)
53 1yav_A Hypothetical protein BS 99.2 3.4E-11 1.2E-15 97.0 8.8 93 1-96 50-147 (159)
54 3kh5_A Protein MJ1225; AMPK, A 99.2 7E-11 2.4E-15 102.3 11.4 94 1-94 38-145 (280)
55 2oux_A Magnesium transporter; 99.2 3.4E-11 1.2E-15 107.6 9.2 87 1-94 176-262 (286)
56 2zy9_A Mg2+ transporter MGTE; 99.2 2.7E-11 9.2E-16 116.0 8.9 138 1-156 194-331 (473)
57 3ddj_A CBS domain-containing p 99.2 2.5E-11 8.5E-16 106.9 8.0 94 1-95 190-289 (296)
58 3ddj_A CBS domain-containing p 99.2 1E-10 3.4E-15 103.0 11.3 90 1-93 127-216 (296)
59 2pfi_A Chloride channel protei 99.2 8E-11 2.7E-15 94.4 9.8 92 1-93 47-149 (164)
60 3kh5_A Protein MJ1225; AMPK, A 99.1 6.1E-11 2.1E-15 102.7 6.9 87 1-89 182-279 (280)
61 2qrd_G Protein C1556.08C; AMPK 99.1 2.8E-10 9.7E-15 101.8 10.7 93 1-94 219-318 (334)
62 3usb_A Inosine-5'-monophosphat 99.1 2.4E-10 8E-15 110.6 9.3 86 1-91 147-234 (511)
63 3t4n_C Nuclear protein SNF4; C 99.1 4.3E-10 1.5E-14 100.1 9.9 130 1-133 148-288 (323)
64 3pc3_A CG1753, isoform A; CBS, 99.0 3E-10 1E-14 109.7 8.4 91 1-93 419-513 (527)
65 1vr9_A CBS domain protein/ACT 99.0 3.3E-10 1.1E-14 96.6 7.6 86 1-93 47-132 (213)
66 2v8q_E 5'-AMP-activated protei 99.0 1.1E-09 3.8E-14 97.9 11.3 93 1-93 71-179 (330)
67 2qrd_G Protein C1556.08C; AMPK 99.0 1.3E-09 4.3E-14 97.5 10.0 92 1-92 58-173 (334)
68 2yzq_A Putative uncharacterize 99.0 3.7E-10 1.3E-14 98.2 6.2 116 1-133 35-152 (282)
69 2v8q_E 5'-AMP-activated protei 99.0 1.4E-09 4.8E-14 97.2 10.1 90 1-91 227-323 (330)
70 3l2b_A Probable manganase-depe 99.0 2.4E-09 8.1E-14 92.4 9.6 57 33-89 185-242 (245)
71 1zfj_A Inosine monophosphate d 98.9 1.6E-09 5.4E-14 103.5 9.0 85 1-90 124-210 (491)
72 1me8_A Inosine-5'-monophosphat 98.9 1.1E-10 3.7E-15 112.6 -0.0 89 1-93 131-223 (503)
73 3org_A CMCLC; transporter, tra 98.9 1.9E-10 6.5E-15 113.6 1.3 88 1-90 490-624 (632)
74 2yzq_A Putative uncharacterize 98.9 3E-09 1E-13 92.4 8.2 86 1-87 94-180 (282)
75 4fxs_A Inosine-5'-monophosphat 98.9 6.4E-10 2.2E-14 107.2 2.6 83 1-89 123-207 (496)
76 2cu0_A Inosine-5'-monophosphat 98.8 3E-10 1E-14 108.9 0.0 101 1-126 127-227 (486)
77 4avf_A Inosine-5'-monophosphat 98.7 1.4E-09 4.7E-14 104.7 0.0 82 1-89 122-205 (490)
78 2d4z_A Chloride channel protei 98.7 4.1E-08 1.4E-12 86.7 9.0 54 38-92 194-247 (250)
79 1vrd_A Inosine-5'-monophosphat 98.5 2E-08 6.8E-13 96.1 0.4 87 1-93 129-217 (494)
80 4esy_A CBS domain containing m 98.4 2.3E-07 7.8E-12 75.5 5.3 58 33-90 18-75 (170)
81 3kpb_A Uncharacterized protein 98.4 6.8E-07 2.3E-11 67.8 6.5 58 34-91 2-59 (122)
82 3k2v_A Putative D-arabinose 5- 98.3 1.8E-06 6.2E-11 68.3 8.7 58 34-91 29-88 (149)
83 3fio_A A cystathionine beta-sy 98.3 9.1E-07 3.1E-11 61.3 5.7 49 42-91 1-49 (70)
84 2yzi_A Hypothetical protein PH 98.3 2.9E-06 1E-10 65.8 9.2 57 33-89 7-63 (138)
85 1pbj_A Hypothetical protein; s 98.3 2.9E-06 9.9E-11 64.4 8.6 56 35-91 3-58 (125)
86 2o16_A Acetoin utilization pro 98.3 4.1E-06 1.4E-10 67.3 9.8 59 33-91 5-63 (160)
87 3fv6_A YQZB protein; CBS domai 98.3 1.5E-06 5.2E-11 69.7 6.9 58 33-91 17-74 (159)
88 2p9m_A Hypothetical protein MJ 98.2 2.9E-06 1E-10 65.6 7.9 58 33-90 8-66 (138)
89 1jcn_A Inosine monophosphate d 98.2 3.1E-08 1.1E-12 95.4 -5.5 87 1-90 142-232 (514)
90 3l2b_A Probable manganase-depe 98.2 2.8E-06 9.6E-11 72.9 7.3 61 32-92 6-66 (245)
91 1y5h_A Hypothetical protein RV 98.2 3E-06 1E-10 65.3 6.5 55 33-87 8-62 (133)
92 3lqn_A CBS domain protein; csg 98.1 3.3E-06 1.1E-10 66.6 6.3 58 33-90 15-74 (150)
93 3gby_A Uncharacterized protein 98.1 1.8E-06 6.1E-11 66.5 4.7 58 32-90 4-61 (128)
94 2rih_A Conserved protein with 98.1 8.3E-06 2.8E-10 63.6 8.6 59 33-91 5-65 (141)
95 2ef7_A Hypothetical protein ST 98.1 6.1E-06 2.1E-10 63.5 7.5 59 33-92 4-62 (133)
96 3ctu_A CBS domain protein; str 98.1 2.7E-06 9.3E-11 67.6 5.5 59 33-91 15-75 (156)
97 3lv9_A Putative transporter; C 98.1 4.7E-06 1.6E-10 65.7 6.5 89 32-133 22-113 (148)
98 3lfr_A Putative metal ION tran 98.1 6.4E-06 2.2E-10 64.3 6.8 90 33-133 3-95 (136)
99 4af0_A Inosine-5'-monophosphat 98.1 5.3E-07 1.8E-11 87.4 0.0 83 1-89 172-256 (556)
100 3ghd_A A cystathionine beta-sy 98.1 6.6E-06 2.2E-10 58.6 5.7 49 43-92 2-50 (70)
101 3fhm_A Uncharacterized protein 98.0 8.9E-06 3E-10 65.5 7.2 61 32-92 23-86 (165)
102 2nyc_A Nuclear protein SNF4; b 98.0 1E-05 3.6E-10 62.7 7.3 58 34-91 9-69 (144)
103 1yav_A Hypothetical protein BS 98.0 6.6E-06 2.3E-10 65.6 5.9 59 32-90 13-73 (159)
104 3nqr_A Magnesium and cobalt ef 98.0 4.5E-06 1.5E-10 64.3 4.7 89 33-133 3-94 (127)
105 2emq_A Hypothetical conserved 98.0 6.7E-06 2.3E-10 65.1 5.5 58 33-90 11-70 (157)
106 1pvm_A Conserved hypothetical 98.0 9.2E-06 3.2E-10 66.7 6.4 58 33-90 9-66 (184)
107 2pfi_A Chloride channel protei 98.0 9.6E-06 3.3E-10 64.4 6.3 59 32-90 12-72 (164)
108 3jtf_A Magnesium and cobalt ef 98.0 6.3E-06 2.1E-10 63.7 5.0 87 33-133 5-94 (129)
109 2rc3_A CBS domain; in SITU pro 98.0 1.4E-05 4.6E-10 61.8 6.5 56 34-90 7-65 (135)
110 4gqw_A CBS domain-containing p 98.0 9.7E-06 3.3E-10 63.3 5.7 56 33-88 5-62 (152)
111 3sl7_A CBS domain-containing p 97.9 9.2E-06 3.1E-10 65.5 5.4 54 34-87 5-60 (180)
112 2j9l_A Chloride channel protei 97.9 2.4E-05 8.1E-10 63.4 7.0 60 32-91 10-77 (185)
113 3i8n_A Uncharacterized protein 97.9 9.1E-06 3.1E-10 62.7 4.2 89 33-133 6-97 (130)
114 3lhh_A CBS domain protein; str 97.9 1.4E-05 4.8E-10 65.0 5.6 116 32-160 41-169 (172)
115 3pc3_A CG1753, isoform A; CBS, 97.9 3.5E-05 1.2E-09 74.2 8.7 93 32-133 383-477 (527)
116 1o50_A CBS domain-containing p 97.9 2.2E-05 7.5E-10 62.5 6.1 59 32-91 15-74 (157)
117 3hf7_A Uncharacterized CBS-dom 97.8 1.9E-05 6.4E-10 61.3 5.2 113 34-156 3-128 (130)
118 3k6e_A CBS domain protein; str 97.8 2.3E-05 7.7E-10 63.3 5.9 58 34-91 16-75 (156)
119 3oco_A Hemolysin-like protein 97.8 1.6E-05 5.5E-10 63.1 4.8 114 33-159 20-147 (153)
120 4fry_A Putative signal-transdu 97.8 6.1E-05 2.1E-09 59.7 7.9 57 34-91 8-70 (157)
121 3oi8_A Uncharacterized protein 97.8 2E-05 6.9E-10 63.0 5.0 88 33-133 38-128 (156)
122 3ocm_A Putative membrane prote 97.8 3.8E-05 1.3E-09 63.1 6.4 117 33-163 36-165 (173)
123 2uv4_A 5'-AMP-activated protei 97.8 3.1E-05 1.1E-09 61.3 5.6 51 41-91 29-79 (152)
124 3kxr_A Magnesium transporter, 97.7 5.9E-05 2E-09 63.8 7.2 56 32-87 53-111 (205)
125 2d4z_A Chloride channel protei 97.7 5.7E-05 1.9E-09 66.4 6.4 62 33-94 13-76 (250)
126 1vr9_A CBS domain protein/ACT 97.5 0.00011 3.9E-09 62.0 6.1 57 33-89 13-69 (213)
127 2oux_A Magnesium transporter; 97.5 0.00014 4.9E-09 64.4 6.3 56 32-87 136-196 (286)
128 2yvy_A MGTE, Mg2+ transporter 97.3 0.00037 1.3E-08 61.2 7.0 56 33-88 135-195 (278)
129 3fio_A A cystathionine beta-sy 96.8 0.00089 3E-08 45.7 3.6 43 1-45 26-69 (70)
130 4fxs_A Inosine-5'-monophosphat 96.8 0.00035 1.2E-08 67.1 1.8 51 36-86 92-142 (496)
131 3org_A CMCLC; transporter, tra 96.7 0.00063 2.1E-08 67.0 2.6 61 32-92 452-515 (632)
132 3ghd_A A cystathionine beta-sy 96.6 0.0014 4.9E-08 46.2 3.3 44 1-46 26-70 (70)
133 2zy9_A Mg2+ transporter MGTE; 96.5 0.0039 1.3E-07 59.3 6.8 56 32-87 154-214 (473)
134 3usb_A Inosine-5'-monophosphat 96.2 0.0077 2.6E-07 58.0 7.2 50 38-87 118-169 (511)
135 1vrd_A Inosine-5'-monophosphat 96.0 0.001 3.5E-08 63.3 -0.1 53 35-87 97-149 (494)
136 1zfj_A Inosine monophosphate d 95.9 0.011 3.9E-07 55.9 6.6 53 35-87 92-146 (491)
137 4avf_A Inosine-5'-monophosphat 95.8 0.00062 2.1E-08 65.2 -2.9 51 35-86 90-140 (490)
138 1jcn_A Inosine monophosphate d 95.1 0.0042 1.4E-07 59.5 0.5 53 35-87 110-165 (514)
139 1me8_A Inosine-5'-monophosphat 94.5 0.0065 2.2E-07 58.2 0.0 49 39-87 103-154 (503)
140 2cu0_A Inosine-5'-monophosphat 93.4 0.022 7.4E-07 54.2 1.3 50 37-87 97-146 (486)
141 4af0_A Inosine-5'-monophosphat 92.7 0.042 1.4E-06 53.3 2.2 48 39-86 144-194 (556)
142 3ukx_C Bimax2 peptide; arm rep 60.6 2.7 9.2E-05 23.8 0.7 14 236-249 10-23 (28)
143 3iz6_Q 40S ribosomal protein S 42.9 5.7 0.0002 31.7 0.3 57 137-205 41-100 (141)
144 1tif_A IF3-N, translation init 39.0 30 0.001 24.7 3.6 25 64-88 13-37 (78)
145 2jpp_A Translational repressor 32.3 38 0.0013 23.8 3.1 20 194-214 16-35 (70)
146 2bti_A Carbon storage regulato 30.1 45 0.0015 22.9 3.1 20 194-214 18-37 (63)
147 1vpz_A Carbon storage regulato 29.3 46 0.0016 23.5 3.1 20 194-214 28-47 (73)
148 2amw_A Hypothetical protein NE 27.1 51 0.0017 22.5 3.2 26 126-151 46-75 (83)
149 1vd2_A Protein kinase C, IOTA 26.9 89 0.003 22.7 4.5 47 43-89 19-71 (89)
150 1v95_A Nuclear receptor coacti 22.7 1.9E+02 0.0066 22.3 6.0 48 47-94 44-106 (130)
151 1f0z_A THis protein; ubiquitin 22.3 88 0.003 20.6 3.5 31 41-71 7-37 (66)
152 1dv5_A APO-DCP, APO-D-alanyl c 21.5 60 0.002 22.1 2.6 28 126-153 45-76 (80)
No 1
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=99.86 E-value=1.8e-21 Score=153.67 Aligned_cols=92 Identities=23% Similarity=0.440 Sum_probs=75.4
Q ss_pred hhhccCCCcHHHHhhhcccEEEecCceEEEeCCcChHHhHhhcCCC--CCC--CCccCCHHHHHHHHhCCCCCCCcEEEE
Q 041526 91 GEIFDESDSKEEIQKKTGYIVMRAEGIYDVDANTSIDQLSEDLNIK--MPE--GHQYETVSGFVCEAFGYIPRTGESIKV 166 (252)
Q Consensus 91 Gei~DE~d~~~~~~~~~~~i~~~~dg~~~v~G~~~L~dl~~~lgi~--l~~--~~~~~TLaGlil~~lg~iP~~Gd~i~~ 166 (252)
.+|.||+|... +.+.++.+|+|+|+|.++|++|++.||++ ||+ .++|+||||||+++||++|++|++|.+
T Consensus 16 ~~I~DE~D~ee------~~i~~~~dg~~~v~G~~~l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~lg~iP~~Gd~v~~ 89 (113)
T 3ded_A 16 NLYFQGHDGEE------DEIVQREDGSWLVDGMVSLDRFREFFELEAPLPGEAGGNIHTLAGVMLYQLGRVPSVTDRFEW 89 (113)
T ss_dssp -----------------CCEEECTTSCEEEETTCBHHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHHCSSCCTTCEEEE
T ss_pred CcCcCCCCCCC------CceEEecCCEEEEecccCHHHHHHHhCCCccCCcccCCCCccHHHHHHHHhCCCCCCCCEEEE
Confidence 47899998542 45788999999999999999999999999 986 347999999999999999999999999
Q ss_pred eeecccccccccccCCCCCccccccccceEEEEEEEecCCeeeEEEEEE
Q 041526 167 VVEKENQEENDEDTENGSDRQDSKEKHQIYKLEILAGNARKVSAVRFER 215 (252)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~ri~~V~i~~ 215 (252)
++|+|+|++|+++||.+|+|++
T Consensus 90 ---------------------------~g~~f~V~~~d~~RI~~V~v~~ 111 (113)
T 3ded_A 90 ---------------------------NGFSFEVVDMDRTRVDKILVQR 111 (113)
T ss_dssp ---------------------------TTEEEEEEEEETTEEEEEEEEE
T ss_pred ---------------------------CCEEEEEEEEeCCeEEEEEEEE
Confidence 5899999999999999999985
No 2
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=99.84 E-value=9.4e-21 Score=141.46 Aligned_cols=81 Identities=25% Similarity=0.546 Sum_probs=74.9
Q ss_pred cEEEecCceEEEeCCcChHHhHhhcCCCCCCCCccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCCCCCccc
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTENGSDRQD 188 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~lgi~l~~~~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~~~~ 188 (252)
.+.+.++|+|+++|+++|+||++.||+++|+ ++|+|||||++++||++|++|+++.+
T Consensus 2 ~i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~-~~~~Tl~G~i~~~lg~iP~~Gd~v~~---------------------- 58 (83)
T 3llb_A 2 YIKPLPSGDFIVKALTPVDAFNDFFGSEFSD-EEFDTVGGLVMSAFGHLPKRNEVVEL---------------------- 58 (83)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHCCCCCT-TTCSBHHHHHHHHHSSCCCTTCEEEE----------------------
T ss_pred ceEEeCCCEEEEEccCCHHHHHHHhCCCCCC-CCCcCHHHHHHHHhCcCCCCCCEEEE----------------------
Confidence 3677899999999999999999999999986 47999999999999999999999999
Q ss_pred cccccceEEEEEEEecCCeeeEEEEEEcC
Q 041526 189 SKEKHQIYKLEILAGNARKVSAVRFERIN 217 (252)
Q Consensus 189 ~~~~~~~~~~~V~~~~~~ri~~V~i~~~~ 217 (252)
++|+|+|++|+++||.+|++++..
T Consensus 59 -----~~~~f~V~~~~~~rI~~v~v~~~~ 82 (83)
T 3llb_A 59 -----GEFRFRVLNADSRRVHLLRLSPLQ 82 (83)
T ss_dssp -----TTEEEEEEEECSSCEEEEEEEEC-
T ss_pred -----CCEEEEEEEeeCCEEEEEEEEECC
Confidence 589999999999999999998654
No 3
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=99.84 E-value=8.3e-21 Score=144.09 Aligned_cols=80 Identities=16% Similarity=0.351 Sum_probs=74.6
Q ss_pred cEEEecCceEEEeCCcChHHhHhhcCCCCCCCCccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCCCCCccc
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTENGSDRQD 188 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~lgi~l~~~~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~~~~ 188 (252)
.+.+.++|+|+++|+++|++|++.||++||++ +|+|||||++++||++|++|+++.+
T Consensus 11 ~i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~-~~dTlgG~i~~~lg~iP~~Ge~v~~---------------------- 67 (91)
T 2pli_A 11 NIHAVSSERWRIHAATEIEDINTFFGTEYSSE-EADTIGGLVIQELGHLPVRGEKVLI---------------------- 67 (91)
T ss_dssp SEEEEETTEEEEETTCBHHHHHHHHCCCCCCS-SCCBHHHHHHHHHSSCCCTTCEEEE----------------------
T ss_pred ceEEeCCCEEEEEcCCCHHHHHHHhCCCCCCC-CCccHHHHHHHHhCCCCCCCCEEEE----------------------
Confidence 47788999999999999999999999999874 6999999999999999999999998
Q ss_pred cccccceEEEEEEEecCCeeeEEEEEEc
Q 041526 189 SKEKHQIYKLEILAGNARKVSAVRFERI 216 (252)
Q Consensus 189 ~~~~~~~~~~~V~~~~~~ri~~V~i~~~ 216 (252)
++|+|+|++|+++||.+|+|++.
T Consensus 68 -----~~~~f~V~~~d~~rI~~v~v~~~ 90 (91)
T 2pli_A 68 -----GGLQFTVARADNRRLHTLMATRV 90 (91)
T ss_dssp -----TTEEEEEEEECSSCEEEEEEEEC
T ss_pred -----CCEEEEEEEEeCCEEEEEEEEEC
Confidence 58999999999999999999753
No 4
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=99.84 E-value=1.1e-20 Score=143.76 Aligned_cols=82 Identities=22% Similarity=0.303 Sum_probs=74.3
Q ss_pred cEEEecCceEEEeCCcChHHhHhhcCCCCCCCCccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCCCCCccc
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTENGSDRQD 188 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~lgi~l~~~~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~~~~ 188 (252)
.+.+.++|+|+++|+++|++|++.||++||++ +|+|||||++++||++|++|+++.+..
T Consensus 9 ~i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~-~~~TlgG~i~~~lg~iP~~Gd~v~~~~-------------------- 67 (93)
T 2r2z_A 9 LYTQVADNEYLVQGRMLIDEFNEVFETDLHMS-DVDTMAGYLITALGTIPDEGEKPSFEV-------------------- 67 (93)
T ss_dssp CEEEEETTEEEEETTSBHHHHHHHHTCCCCCT-TCCBHHHHHHHHHSSCCCTTCCCEEEE--------------------
T ss_pred CeEEeCCCEEEEECCCCHHHHHHHhCCCCCCC-CcccHHHHHHHHhCCCCCCCCEEEEec--------------------
Confidence 47778999999999999999999999999874 699999999999999999999997610
Q ss_pred cccccceEEEEEEEecCCeeeEEEEEEc
Q 041526 189 SKEKHQIYKLEILAGNARKVSAVRFERI 216 (252)
Q Consensus 189 ~~~~~~~~~~~V~~~~~~ri~~V~i~~~ 216 (252)
++|+|+|++|+++||.+|+|++.
T Consensus 68 -----~~~~f~V~~~~~~rI~~v~v~~~ 90 (93)
T 2r2z_A 68 -----GNIKLTAEEMEGTRLLVLRVHFY 90 (93)
T ss_dssp -----TTEEEEEEEEETTEEEEEEEEEC
T ss_pred -----CCEEEEEEEeeCCEEEEEEEEec
Confidence 38999999999999999999854
No 5
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=99.84 E-value=1.8e-20 Score=139.27 Aligned_cols=80 Identities=15% Similarity=0.306 Sum_probs=74.6
Q ss_pred cEEEecCceEEEeCCcChHHhHhhcCCCCCCCCccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCCCCCccc
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTENGSDRQD 188 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~lgi~l~~~~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~~~~ 188 (252)
.+.+.++|+|+++|+++|+||++.||+++|++ +|+|||||++++||++|++||++.+
T Consensus 2 ~i~~~~dg~~~v~g~~~l~dl~~~l~~~l~~~-~~~Tl~G~i~~~lg~iP~~Gd~v~~---------------------- 58 (81)
T 3lae_A 2 NAIQQSDGSMIIDGSANLRDLNKMFNWELDTE-DARTFNGLILEHLEEIPDEGTICEI---------------------- 58 (81)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHCCCCCCS-SCSBHHHHHHHHCSSCCCTTCEEEE----------------------
T ss_pred CcEEeCCCEEEEEeeCCHHHHHHHhCCCCCCC-CCccHHHHHHHHhCCCCCCCCEEEE----------------------
Confidence 36778999999999999999999999999874 7999999999999999999999999
Q ss_pred cccccceEEEEEEEecCCeeeEEEEEEc
Q 041526 189 SKEKHQIYKLEILAGNARKVSAVRFERI 216 (252)
Q Consensus 189 ~~~~~~~~~~~V~~~~~~ri~~V~i~~~ 216 (252)
++|+|+|++|+++||.+|+++++
T Consensus 59 -----~~~~f~V~~~~~~rI~~v~v~~~ 81 (81)
T 3lae_A 59 -----DGLLITILEVGDNMIKQAKVVKL 81 (81)
T ss_dssp -----TTEEEEEEEEETTEEEEEEEEEC
T ss_pred -----CCEEEEEEEeeCCEEEEEEEEEC
Confidence 58999999999999999999753
No 6
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=99.83 E-value=4.8e-20 Score=138.32 Aligned_cols=81 Identities=25% Similarity=0.501 Sum_probs=74.2
Q ss_pred cEEEecCceEEEeCCcChHHhHhhcCCC-CCCC--CccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCCCCC
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDLNIK-MPEG--HQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTENGSD 185 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~lgi~-l~~~--~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~ 185 (252)
.+.+.++|+|+++|+++|++|++.||++ ||++ ++|+|||||++++||++|++|+++.+
T Consensus 2 ~i~~~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~------------------- 62 (86)
T 2pls_A 2 NAVQREDGSWLLDGLIAVPELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFW------------------- 62 (86)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHTCSCCTTTTSCSCCBHHHHHHHHHTSCCCTTCEEEE-------------------
T ss_pred ceEEeCCCeEEEEcccCHHHHHHHhCCCcCCCccCCCcccHHHHHHHHhCCCCCCCCEEEE-------------------
Confidence 3567789999999999999999999999 9862 46999999999999999999999998
Q ss_pred ccccccccceEEEEEEEecCCeeeEEEEEEc
Q 041526 186 RQDSKEKHQIYKLEILAGNARKVSAVRFERI 216 (252)
Q Consensus 186 ~~~~~~~~~~~~~~V~~~~~~ri~~V~i~~~ 216 (252)
++|+|+|++|+++||.+|++++.
T Consensus 63 --------~~~~f~V~~~~~~rI~~v~v~~~ 85 (86)
T 2pls_A 63 --------ENWRLEVIDMDSKRIDKVLATKI 85 (86)
T ss_dssp --------TTEEEEEEEEETTEEEEEEEEEC
T ss_pred --------CCEEEEEEEeeCCEEEEEEEEEC
Confidence 58999999999999999999754
No 7
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=99.83 E-value=3.3e-20 Score=139.30 Aligned_cols=81 Identities=22% Similarity=0.405 Sum_probs=73.4
Q ss_pred EEEecCceEEEeCCcChHHhHhhcCCC-CCCCCccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCCCCCccc
Q 041526 110 IVMRAEGIYDVDANTSIDQLSEDLNIK-MPEGHQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTENGSDRQD 188 (252)
Q Consensus 110 i~~~~dg~~~v~G~~~L~dl~~~lgi~-l~~~~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~~~~ 188 (252)
+.+.++|+|+++|+++|++|++.||++ +|++++|+|||||++++||++|+.|+++.+
T Consensus 3 i~~~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~---------------------- 60 (86)
T 2p4p_A 3 AMRRNEDSWLIDGATPLEDVMRALNIHTFPRDENYETIGGFMMYMLRXIPXXTDFVLY---------------------- 60 (86)
T ss_dssp CCCCCCSEEEEETTSBHHHHHHHTTCCCSCCSCSSCBHHHHHHHHHCSCCCTTCEEEE----------------------
T ss_pred eEEeCCCEEEEEccCCHHHHHHHhCCCCCCcCCCCccHHHHHHHHhCCCCCCCcEEEE----------------------
Confidence 344679999999999999999999996 986447999999999999999999999998
Q ss_pred cccccceEEEEEEEecCCeeeEEEEEEcC
Q 041526 189 SKEKHQIYKLEILAGNARKVSAVRFERIN 217 (252)
Q Consensus 189 ~~~~~~~~~~~V~~~~~~ri~~V~i~~~~ 217 (252)
++|+|+|++|+++||.+|++++..
T Consensus 61 -----~~~~f~V~~~~~~rI~~v~v~~~~ 84 (86)
T 2p4p_A 61 -----DXYXFEIIDTENFRIDQLMVSFRX 84 (86)
T ss_dssp -----TTEEEEEEEEETTEEEEEEEEECC
T ss_pred -----eeEEEEEEEccCCEEEEEEEEECC
Confidence 589999999999999999998653
No 8
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=99.83 E-value=3.7e-20 Score=141.36 Aligned_cols=81 Identities=27% Similarity=0.593 Sum_probs=71.2
Q ss_pred cEEEecCceEEEeCCcChHHhHhhcCCCCCCC--CccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCCCCCc
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDLNIKMPEG--HQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTENGSDR 186 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~lgi~l~~~--~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~~ 186 (252)
.+.+.++|+|+++|+++|++|++.||++||++ ++|+||||||+++||++|++|++|.+
T Consensus 11 ~i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~~~dTlgG~i~~~lg~iP~~Gd~v~~-------------------- 70 (94)
T 2oai_A 11 LMVTREDGSFLIDGTLPIEELREVLGAELPDGEENNYHTLAGMCISYFGRIPHVGEYFDW-------------------- 70 (94)
T ss_dssp SEEECTTSCEEEETTCBHHHHHHHHTC-------CCCSBHHHHHHHHHSSCCCTTCEEEE--------------------
T ss_pred CeEEeCCCeEEEeccCCHHHHHHHhCCCCCcccCCCCccHHHHHHHHhCCCCCCCCEEEE--------------------
Confidence 47778999999999999999999999999862 36999999999999999999999998
Q ss_pred cccccccceEEEEEEEecCCeeeEEEEEEc
Q 041526 187 QDSKEKHQIYKLEILAGNARKVSAVRFERI 216 (252)
Q Consensus 187 ~~~~~~~~~~~~~V~~~~~~ri~~V~i~~~ 216 (252)
++|+|+|++|+++||.+|+|++.
T Consensus 71 -------~~~~f~V~~~d~~rI~~V~v~~~ 93 (94)
T 2oai_A 71 -------AGWRIEIVDLDGARIDXLLLQRL 93 (94)
T ss_dssp -------TTEEEEEEEEETTEEEEEEEEEC
T ss_pred -------CCEEEEEEEEcCCEEEEEEEEEC
Confidence 58999999999999999999854
No 9
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=99.82 E-value=3.8e-20 Score=140.08 Aligned_cols=81 Identities=31% Similarity=0.491 Sum_probs=74.6
Q ss_pred cEEEecCceEEEeCCcChHHhHhhcCCCCCCC-CccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCCCCCcc
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDLNIKMPEG-HQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTENGSDRQ 187 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~lgi~l~~~-~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~~~ 187 (252)
.+.+.++|+|+++|+++|++|++.||++||++ ++|+|||||++++||++|++|+++.+
T Consensus 8 ~i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~~~~~~TlgG~i~~~lg~iP~~Gd~v~~--------------------- 66 (90)
T 2p13_A 8 VAEQQADGTWLMDGWISIRKASNLLEHDLVDEAERYSTLGGYLLWQFGYIPAAGEQITV--------------------- 66 (90)
T ss_dssp SEEECTTSCEEEETTSBHHHHHHHHTSCCCCTTCCCCBHHHHHHHHHSSCCCTTCEEEE---------------------
T ss_pred ceEEeCCCEEEEECcCCHHHHHHHHCCCCCCcCCCCccHHHHHHHHhCCCCCCCCEEEE---------------------
Confidence 46778999999999999999999999999863 46999999999999999999999998
Q ss_pred ccccccceEEEEEEEecCCeeeEEEEEEc
Q 041526 188 DSKEKHQIYKLEILAGNARKVSAVRFERI 216 (252)
Q Consensus 188 ~~~~~~~~~~~~V~~~~~~ri~~V~i~~~ 216 (252)
++|+|+|++|+++||.+|++++.
T Consensus 67 ------~~~~f~V~~~d~~rI~~v~v~~~ 89 (90)
T 2p13_A 67 ------DGLIFEIVSVNKHNIGKVRVHRT 89 (90)
T ss_dssp ------TTEEEEECCBCSSSBCEEEEEEC
T ss_pred ------CCEEEEEEEEeCCEEEEEEEEEC
Confidence 58999999999999999999753
No 10
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=99.82 E-value=4.2e-20 Score=140.35 Aligned_cols=80 Identities=18% Similarity=0.406 Sum_probs=69.2
Q ss_pred EEEecCceEEEeCCcChHHhHhhcCCC-CCCCCccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCCCCCccc
Q 041526 110 IVMRAEGIYDVDANTSIDQLSEDLNIK-MPEGHQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTENGSDRQD 188 (252)
Q Consensus 110 i~~~~dg~~~v~G~~~L~dl~~~lgi~-l~~~~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~~~~ 188 (252)
+.+.++|+|+++|+++|++|++.||++ ||++++|+|||||++++||++|++|+++.+
T Consensus 11 i~~~~dg~~~v~G~~~l~dl~~~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~---------------------- 68 (92)
T 2o3g_A 11 VQGNPDESLTVEGALEYVELAPQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADF---------------------- 68 (92)
T ss_dssp ------CCSEEETTCBHHHHTTTTTCCCCCTTCSCSBHHHHHHHHHTSCCCTTCEEEE----------------------
T ss_pred eEEcCCCEEEEEccCCHHHHHHHhCCCCCCcCCCcccHHHHHHHHhCCCCCCCCEEEE----------------------
Confidence 566789999999999999999999999 983347999999999999999999999998
Q ss_pred cccccceEEEEEEEecCCeeeEEEEEEc
Q 041526 189 SKEKHQIYKLEILAGNARKVSAVRFERI 216 (252)
Q Consensus 189 ~~~~~~~~~~~V~~~~~~ri~~V~i~~~ 216 (252)
++|+|+|++|+++||.+|+|++.
T Consensus 69 -----~~~~f~V~~~~~~rI~~V~v~~~ 91 (92)
T 2o3g_A 69 -----HGWRFEVVEKEGQRIERVKITKL 91 (92)
T ss_dssp -----TTEEEEEEEEETTEEEEEEEEEC
T ss_pred -----CCEEEEEEEeeCCEEEEEEEEEC
Confidence 58999999999999999999754
No 11
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=99.81 E-value=1.8e-19 Score=135.52 Aligned_cols=78 Identities=18% Similarity=0.263 Sum_probs=72.4
Q ss_pred EEEecCceEEEeCCcChHHhHhhcCCCCCCCCccCCHHHHHHHHhCCCCCCCc--EEEEeeecccccccccccCCCCCcc
Q 041526 110 IVMRAEGIYDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGE--SIKVVVEKENQEENDEDTENGSDRQ 187 (252)
Q Consensus 110 i~~~~dg~~~v~G~~~L~dl~~~lgi~l~~~~~~~TLaGlil~~lg~iP~~Gd--~i~~~~~~~~~~~~~~~~~~~~~~~ 187 (252)
+.+.++|+|+++|+++|+||++.||++||++ +|+|||||++++||++|++|+ ++.+
T Consensus 2 i~~~~dg~~~v~G~~~l~dl~~~l~~~l~~~-~~dTl~G~v~~~lg~iP~~Gd~~~v~~--------------------- 59 (87)
T 2rk5_A 2 SREIADNTYIVLGTMTLNDFNEYFETDLESD-NVDTIAGFYLTGVGTIPSQEEKEHFEV--------------------- 59 (87)
T ss_dssp EEEEETTEEEEETTSBHHHHHHHHTCCCCCT-TCCBHHHHHHHHHCSCCCSSSCCEEEE---------------------
T ss_pred eEEeCCCEEEEEccCCHHHHHHHhCCCCCCC-CcccHHHHHHHHhCcCCCCCCcEEEEE---------------------
Confidence 4567899999999999999999999999874 699999999999999999999 9988
Q ss_pred ccccccce----EEEEEEEecCCeeeEEEEEE
Q 041526 188 DSKEKHQI----YKLEILAGNARKVSAVRFER 215 (252)
Q Consensus 188 ~~~~~~~~----~~~~V~~~~~~ri~~V~i~~ 215 (252)
++ |+|+|++|+++||.+|++++
T Consensus 60 ------~~~~~~~~f~V~~~~~~rI~~v~v~~ 85 (87)
T 2rk5_A 60 ------ESNGKHLELINDKVKDGRVTKLKILV 85 (87)
T ss_dssp ------EETTEEEEEEEEEEETTEEEEEEEEE
T ss_pred ------CCceEEEEEEEEEEeCCEEEEEEEEe
Confidence 46 99999999999999999974
No 12
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=99.79 E-value=4.8e-19 Score=134.76 Aligned_cols=78 Identities=18% Similarity=0.398 Sum_probs=71.4
Q ss_pred cEEEecCceEEEeCCcChHHhHhhcCCCCCCC------CccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCC
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDLNIKMPEG------HQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTEN 182 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~lgi~l~~~------~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~ 182 (252)
.+.+.++|+|+++|+++|++|++.||+ |+. ++|+||||||+++||++|+.|+++.+
T Consensus 8 ~i~~~~dg~~~v~G~~~l~dl~~~l~~--~~~~~~~~~~~~~TlgG~i~~~lg~iP~~Gd~v~~---------------- 69 (93)
T 2nqw_A 8 PFKVLGDGSYLFEGKTSLSDVRHYLDL--PENAFGELGDEVDTLSGLFLEIKQELPHVGDTAVY---------------- 69 (93)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHTC--CTTTTHHHHTTCSBHHHHHHHHHCSCCCTTCEEEE----------------
T ss_pred CeEEeCCCEEEEEcccCHHHHHHHhCC--CcccccccCCCcccHHHHHHHHhCcCCCCCCEEEE----------------
Confidence 477789999999999999999999998 542 46999999999999999999999998
Q ss_pred CCCccccccccceEEEEEEEecCCeeeEEEEEE
Q 041526 183 GSDRQDSKEKHQIYKLEILAGNARKVSAVRFER 215 (252)
Q Consensus 183 ~~~~~~~~~~~~~~~~~V~~~~~~ri~~V~i~~ 215 (252)
++|+|+|++|+++||.+|+|++
T Consensus 70 -----------~~~~f~V~~~d~~rI~~V~v~~ 91 (93)
T 2nqw_A 70 -----------EPFRFQVTQMDKRRIIEIKIFP 91 (93)
T ss_dssp -----------TTEEEEEEEECSSSEEEEEECC
T ss_pred -----------CCEEEEEEEeeCCEEEEEEEEE
Confidence 5899999999999999999863
No 13
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=99.74 E-value=1.8e-18 Score=134.01 Aligned_cols=81 Identities=20% Similarity=0.403 Sum_probs=74.5
Q ss_pred cEEEecCceEEEeCCcChHHhHhhcCCCCCCCCccCCHHHHHHHHhCCCCCCCcEEEEeeecccccccccccCCCCCccc
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGESIKVVVEKENQEENDEDTENGSDRQD 188 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~lgi~l~~~~~~~TLaGlil~~lg~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~~~~ 188 (252)
.+.+.++|+|+++|+++|+||++.||++||++ +|+|||||++++||++|+.|+++.+
T Consensus 5 ~i~~~~dg~~~v~G~~~l~dl~~~lg~~l~~e-~~dTlgGli~~~lg~iP~~Gd~v~~---------------------- 61 (101)
T 2p3h_A 5 DITETSPDKWLIDGDTPLDEVERAIGYELPEG-DYETISGLLFDHANALLKTGDVIEI---------------------- 61 (101)
T ss_dssp CEEEEETTEEEEETTCBHHHHHHHHTSCCCCS-SCCBHHHHHHHHHCSCCCTTCEEEE----------------------
T ss_pred ceEEeCCCEEEEEccCCHHHHHHHhCCCCCCC-CCccHHHHHHHHhCCCCCCCCEEEE----------------------
Confidence 46778999999999999999999999999874 7999999999999999999999998
Q ss_pred cccccceEEEEEEEecCC-----eeeEEEEEEcCC
Q 041526 189 SKEKHQIYKLEILAGNAR-----KVSAVRFERINN 218 (252)
Q Consensus 189 ~~~~~~~~~~~V~~~~~~-----ri~~V~i~~~~~ 218 (252)
+ |+|+|.+|+++ ||.+|++++...
T Consensus 62 -----~-~~f~V~~~d~~~~~r~rI~~V~v~~~~~ 90 (101)
T 2p3h_A 62 -----P-LDFEPEDYLNNTSPTQRILRITVLEVER 90 (101)
T ss_dssp -----E-CCCCGGGGTTCSSCCCCEEEEEEEEEET
T ss_pred -----e-EEEEEEEEeCCCCcCCEEEEEEEEECCC
Confidence 6 99999999999 999999985433
No 14
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.69 E-value=2.8e-17 Score=130.40 Aligned_cols=96 Identities=47% Similarity=0.781 Sum_probs=76.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++.++++|+|+.+||+.++..+.. ...++.++| +++.++++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 39 ~pVvd~~~~~~vGivt~~dl~~~~~~~~~-~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGii 116 (136)
T 3lfr_A 39 YPVIGESHDDVLGVLLAKDLLPLILKADG-DSDDVKKLL-RPATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLV 116 (136)
T ss_dssp EEEESSSTTCEEEEEEGGGGGGGGGSSSG-GGCCGGGTC-BCCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEE
T ss_pred EEEEcCCCCcEEEEEEHHHHHHHHHhccC-CCcCHHHHc-CCCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEE
Confidence 59998755799999999999987653221 345788999 6789999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhccCCC
Q 041526 81 TLEDVVEEIVGEIFDESD 98 (252)
Q Consensus 81 TleDIleeIvGei~DE~d 98 (252)
|..||+++++|++.||++
T Consensus 117 t~~Dil~~l~~~~~de~~ 134 (136)
T 3lfr_A 117 TIEDVLEQIVGDIEDEHD 134 (136)
T ss_dssp EHHHHHTTC---------
T ss_pred EHHHHHHHHhCCCcCccc
Confidence 999999999999999875
No 15
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.67 E-value=1.1e-16 Score=126.04 Aligned_cols=92 Identities=25% Similarity=0.512 Sum_probs=79.6
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++.++++|+|+.+||+.++..+......++.++| +++.++++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 38 ~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGii 116 (130)
T 3hf7_A 38 IVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLV 116 (130)
T ss_dssp EEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEE
T ss_pred EEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEe
Confidence 599976557999999999999887654322235688888 8889999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhh
Q 041526 81 TLEDVVEEIVGEI 93 (252)
Q Consensus 81 TleDIleeIvGei 93 (252)
|..|++++++|++
T Consensus 117 t~~Dil~~l~g~i 129 (130)
T 3hf7_A 117 TVEDILEEIVGDF 129 (130)
T ss_dssp EHHHHHHHHHC--
T ss_pred eHHHHHHHHhCCC
Confidence 9999999999987
No 16
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.67 E-value=2.5e-16 Score=129.93 Aligned_cols=94 Identities=38% Similarity=0.664 Sum_probs=82.3
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++.++++|+|+.+||+.++..+. ..++.++| +++.+|++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 78 ~pVvd~~~~~lvGivt~~dl~~~~~~~~---~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGii 153 (172)
T 3lhh_A 78 FPVCRNNVDDMVGIISAKQLLSESIAGE---RLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLV 153 (172)
T ss_dssp EEEESSSTTSEEEEEEHHHHHHHHHTTC---CCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEE
T ss_pred EEEEeCCCCeEEEEEEHHHHHHHHhhcC---cccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEe
Confidence 5999875579999999999998776543 45789999 8999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhccCCC
Q 041526 81 TLEDVVEEIVGEIFDESD 98 (252)
Q Consensus 81 TleDIleeIvGei~DE~d 98 (252)
|..||+++++|++.||++
T Consensus 154 t~~Dil~~l~~~~~de~~ 171 (172)
T 3lhh_A 154 TLQDMMDALTGEFFQEDG 171 (172)
T ss_dssp EHHHHHHHHHTTCC----
T ss_pred eHHHHHHHHhCCCccccC
Confidence 999999999999998864
No 17
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.66 E-value=2.3e-16 Score=131.26 Aligned_cols=94 Identities=28% Similarity=0.450 Sum_probs=83.1
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+|||+++.++++|+|+.+||+.++..+. ..++. ++ +++.+|++++++.++++.|++++.++++|+|++|.++|||
T Consensus 72 ~pVvd~~~~~lvGivt~~Dl~~~~~~~~---~~~v~-~~-~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiI 146 (173)
T 3ocm_A 72 FPVCRGSLDEVVGIGRAKDLVADLITEG---RVRRN-RL-RDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLV 146 (173)
T ss_dssp EEEESSSTTSEEEEEEHHHHHHHHHHHS---SCCGG-GS-BCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEE
T ss_pred EEEEeCCCCCEEEEEEHHHHHHHHhcCC---cchhH-hc-CCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEE
Confidence 6999875579999999999998765432 24566 55 8899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhccCCCc
Q 041526 81 TLEDVVEEIVGEIFDESDS 99 (252)
Q Consensus 81 TleDIleeIvGei~DE~d~ 99 (252)
|..||+++++|++.||++.
T Consensus 147 T~~Dil~~l~~~i~de~~~ 165 (173)
T 3ocm_A 147 TPIDVFEAIAGEFPDEDEL 165 (173)
T ss_dssp CHHHHHHHHHCCCCCTTSC
T ss_pred eHHHHHHHHhCcCCCcccc
Confidence 9999999999999999874
No 18
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.64 E-value=2.6e-16 Score=126.95 Aligned_cols=95 Identities=35% Similarity=0.646 Sum_probs=77.9
Q ss_pred CeEE-ecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEE
Q 041526 1 VPVF-EQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGV 79 (252)
Q Consensus 1 lPV~-~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGI 79 (252)
+||+ +++.++++|+|+.+||+.++..+. ..++.++| +++.++++++++.++++.|++++.+.++|+|++|.++|+
T Consensus 56 ~pVv~d~~~~~lvGivt~~dl~~~~~~~~---~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGi 131 (153)
T 3oco_A 56 FPVTADNDKDKIIGYAYNYDIVRQARIDD---KAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGI 131 (153)
T ss_dssp EEEEETTEEEEEEEEEEHHHHHHHHHHHT---TSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEE
T ss_pred EEEEECCCCCcEEEEEEHHHHHhHHhcCC---CCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEE
Confidence 5899 544478999999999998765432 35688999 899999999999999999999999999999999999999
Q ss_pred EcchhHHHHHHhhhccCCCc
Q 041526 80 VTLEDVVEEIVGEIFDESDS 99 (252)
Q Consensus 80 VTleDIleeIvGei~DE~d~ 99 (252)
||..||+++++|++.||++.
T Consensus 132 vt~~dil~~l~~~~~de~~~ 151 (153)
T 3oco_A 132 ITDKDVYEELFGNLRDEQDD 151 (153)
T ss_dssp ECHHHHHHHHHC--------
T ss_pred eeHHHHHHHHhccCCCcccC
Confidence 99999999999999998863
No 19
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.63 E-value=7.6e-16 Score=120.79 Aligned_cols=88 Identities=45% Similarity=0.815 Sum_probs=77.8
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++.++++|+|+.+||+.++..+ ..++.++| +++.++++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 41 ~pVvd~~~~~~~Givt~~dl~~~~~~~----~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Gii 115 (129)
T 3jtf_A 41 FPVYEDDRDNIIGILLAKDLLRYMLEP----ALDIRSLV-RPAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLV 115 (129)
T ss_dssp EEEESSSTTCEEEEEEGGGGGGGGTCT----TSCGGGGC-BCCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEE
T ss_pred EEEEcCCCCcEEEEEEHHHHHhHhccC----CcCHHHHh-CCCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEE
Confidence 599987557999999999999776432 35688888 6789999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhh
Q 041526 81 TLEDVVEEIVGEI 93 (252)
Q Consensus 81 TleDIleeIvGei 93 (252)
|..||+++++|+|
T Consensus 116 t~~Dil~~l~gei 128 (129)
T 3jtf_A 116 TMEDVLEQIVGDI 128 (129)
T ss_dssp EHHHHHHHHHHTC
T ss_pred EHHHHHHHHhCCC
Confidence 9999999999987
No 20
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.62 E-value=1.5e-15 Score=119.10 Aligned_cols=89 Identities=28% Similarity=0.578 Sum_probs=79.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++.++++|+|+.+||+.++..+. ...++.++| +++.++++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 42 ~pVvd~~~~~~~Givt~~dl~~~~~~~~--~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGiv 118 (130)
T 3i8n_A 42 PLVYSEQKDNIIGFVHRLELFKMQQSGS--GQKQLGAVM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLV 118 (130)
T ss_dssp CEEESSSTTCEEEECCHHHHHHHHHTTT--TTSBHHHHS-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEE
T ss_pred EEEEeCCCCcEEEEEEHHHHHHHHhcCC--CcCCHHHHh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEE
Confidence 6999875579999999999998776543 246789999 7889999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhh
Q 041526 81 TLEDVVEEIVGE 92 (252)
Q Consensus 81 TleDIleeIvGe 92 (252)
|..||+++++|+
T Consensus 119 t~~dil~~l~ge 130 (130)
T 3i8n_A 119 TLEDIFEHLVGE 130 (130)
T ss_dssp EHHHHHHHHHTC
T ss_pred EHHHHHHHHcCC
Confidence 999999999885
No 21
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.61 E-value=1.9e-15 Score=120.86 Aligned_cols=90 Identities=33% Similarity=0.620 Sum_probs=80.1
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++.++++|+|+.+||+.++..+. ..++.++| +++.++++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 59 ~pVvd~~~~~lvGivt~~dl~~~~~~~~---~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Gii 134 (148)
T 3lv9_A 59 YPVCRKNKDDILGFVHIRDLYNQKINEN---KIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVV 134 (148)
T ss_dssp EEEESSSTTSEEEEEEHHHHHHHHHHHS---CCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEE
T ss_pred EEEEcCCCCcEEEEEEHHHHHHHHhcCC---CccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEE
Confidence 5999875479999999999998765432 35688999 8999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhc
Q 041526 81 TLEDVVEEIVGEIF 94 (252)
Q Consensus 81 TleDIleeIvGei~ 94 (252)
|..||+++++|+|.
T Consensus 135 t~~dil~~l~~~i~ 148 (148)
T 3lv9_A 135 TIEDILEEIVGEIQ 148 (148)
T ss_dssp EHHHHHHHHHHTC-
T ss_pred EHHHHHHHHhCcCC
Confidence 99999999999873
No 22
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.60 E-value=2.2e-15 Score=117.65 Aligned_cols=89 Identities=42% Similarity=0.719 Sum_probs=76.3
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++.++++|+|+.+||+.++..+. ...++.++| +++.++++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 39 ~pVvd~~~~~~vGivt~~dl~~~~~~~~--~~~~v~~~m-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Gii 115 (127)
T 3nqr_A 39 FPVISEDKDHIEGILMAKDLLPFMRSDA--EAFSMDKVL-RTAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLV 115 (127)
T ss_dssp EEEESSSTTCEEEEEEGGGGGGGGSTTC--CCCCHHHHC-BCCCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEE
T ss_pred EEEEcCCCCcEEEEEEHHHHHHHHhccC--CCCCHHHHc-CCCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEE
Confidence 5899875579999999999998764332 246789999 6789999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhh
Q 041526 81 TLEDVVEEIVGE 92 (252)
Q Consensus 81 TleDIleeIvGe 92 (252)
|..||+++++|+
T Consensus 116 t~~dll~~l~ge 127 (127)
T 3nqr_A 116 TIEDILELIVGE 127 (127)
T ss_dssp EHHHHHHHC---
T ss_pred EHHHHHHHHhCC
Confidence 999999999875
No 23
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.52 E-value=2.3e-14 Score=117.18 Aligned_cols=92 Identities=18% Similarity=0.332 Sum_probs=75.9
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCc----ccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGEL----LESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGT 76 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~----~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~ 76 (252)
+||+++ .++++|+|+.+|++.++..... ....++.++|.+++.++++++++.++++.|.+++ +++|||++|.+
T Consensus 51 ~pVvd~-~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l 127 (156)
T 3k6e_A 51 VPVVTD-EKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIF 127 (156)
T ss_dssp EEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBE
T ss_pred EEEEcC-CCcEEEEEEecchhhhhhhcccccccccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEE
Confidence 699975 4789999999999877643211 1235688899999999999999999999998654 58899999999
Q ss_pred EEEEcchhHHHHHHhhhcc
Q 041526 77 VGVVTLEDVVEEIVGEIFD 95 (252)
Q Consensus 77 vGIVTleDIleeIvGei~D 95 (252)
+||||..||++++.+.+.+
T Consensus 128 ~GiiT~~Dil~~~~~~~~~ 146 (156)
T 3k6e_A 128 QGIITRKSILKAVNALLHD 146 (156)
T ss_dssp EEEEEHHHHHHHHHHHSCC
T ss_pred EEEEEHHHHHHHHHHHhcc
Confidence 9999999999999776644
No 24
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.47 E-value=4.1e-14 Score=114.65 Aligned_cols=83 Identities=45% Similarity=0.785 Sum_probs=73.0
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++.++++|+|+.+||+.++..+ ...++.++| +++.+|++++++.++++.|++++.++++|+|++|.++|+|
T Consensus 74 ~pVvd~~~~~lvGivt~~dl~~~~~~~---~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Giv 149 (156)
T 3oi8_A 74 FPVIGEDKDEVLGILHAKDLLKYMFNP---EQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLV 149 (156)
T ss_dssp EEEESSSTTCEEEEEEGGGGGGGSSCG---GGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEE
T ss_pred EEEEcCCCCcEEEEEEHHHHHHHHHcC---CcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEE
Confidence 599987556999999999999765432 245789999 6789999999999999999999999999999999999999
Q ss_pred cchhHHH
Q 041526 81 TLEDVVE 87 (252)
Q Consensus 81 TleDIle 87 (252)
|..||++
T Consensus 150 t~~Dile 156 (156)
T 3oi8_A 150 TFEDIIE 156 (156)
T ss_dssp EHHHHCC
T ss_pred EHHHhcC
Confidence 9999864
No 25
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.39 E-value=1.3e-12 Score=100.10 Aligned_cols=86 Identities=17% Similarity=0.336 Sum_probs=76.1
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||+++ .++++|+|+.+|++.++..+. .++.++|.+++.++++++++.++++.|.+++.+.++|+|++|.++|+|
T Consensus 35 ~~Vvd~-~~~~~G~vt~~dl~~~~~~~~----~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giv 109 (122)
T 3kpb_A 35 LPIVDE-HGKLVGIITSWDIAKALAQNK----KTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIV 109 (122)
T ss_dssp EEEECT-TSBEEEEECHHHHHHHHHTTC----CBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE
T ss_pred EEEECC-CCCEEEEEEHHHHHHHHHhcc----cCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEE
Confidence 589975 378999999999998776543 368899988999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHh
Q 041526 81 TLEDVVEEIVG 91 (252)
Q Consensus 81 TleDIleeIvG 91 (252)
|..|+++.+.+
T Consensus 110 t~~dl~~~l~~ 120 (122)
T 3kpb_A 110 TSEDISRLFGG 120 (122)
T ss_dssp EHHHHHHHHC-
T ss_pred eHHHHHHHhhc
Confidence 99999998754
No 26
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.36 E-value=2.1e-12 Score=101.30 Aligned_cols=93 Identities=18% Similarity=0.263 Sum_probs=78.0
Q ss_pred CeEEecCCCCEEEEEEHHHHhH-HHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLD-YVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGV 79 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~-~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGI 79 (252)
+||+++ .++++|+|+.+||+. .+..+. ....++.++|.+++.++++++++.++++.|.+++.+.+ |+|+.|.++|+
T Consensus 41 ~~Vvd~-~~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Gi 117 (138)
T 2yzi_A 41 LVVIND-DGNVVGFFTKSDIIRRVIVPGL-PYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGI 117 (138)
T ss_dssp EEEECT-TSCEEEEEEHHHHHHHTTTTCC-CTTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEE
T ss_pred EEEEcC-CCcEEEEEeHHHHHHHHHhcCC-cccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEE
Confidence 589975 378999999999984 333322 23457889998899999999999999999999999988 99988999999
Q ss_pred EcchhHHHHHHhhhccC
Q 041526 80 VTLEDVVEEIVGEIFDE 96 (252)
Q Consensus 80 VTleDIleeIvGei~DE 96 (252)
||..||+..+.+.+..+
T Consensus 118 it~~dil~~~~~~~~~~ 134 (138)
T 2yzi_A 118 FTLSDLLEASRRRLETA 134 (138)
T ss_dssp EEHHHHHHHHHCCSCCC
T ss_pred EEHHHHHHHHHHHHHhh
Confidence 99999999998776543
No 27
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.36 E-value=1.3e-12 Score=111.52 Aligned_cols=87 Identities=10% Similarity=0.161 Sum_probs=76.1
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||+++ .++++|+|+.+||+... ...++.++|.+++.+|++++++.++++.|++++.+.++|||++|.++|+|
T Consensus 91 ~~Vvd~-~~~lvGivt~~dll~~~------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiI 163 (205)
T 3kxr_A 91 LFIVDE-ADKYLGTVRRYDIFKHE------PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRV 163 (205)
T ss_dssp EEEECT-TCBEEEEEEHHHHTTSC------TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEE
T ss_pred EEEEcC-CCeEEEEEEHHHHHhCC------CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEE
Confidence 477765 58999999999998531 23568899988999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhc
Q 041526 81 TLEDVVEEIVGEIF 94 (252)
Q Consensus 81 TleDIleeIvGei~ 94 (252)
|..||++.+..+..
T Consensus 164 T~~Dil~~i~~e~~ 177 (205)
T 3kxr_A 164 TLRAATALVREHYE 177 (205)
T ss_dssp EHHHHHHHHHHHHC
T ss_pred EHHHHHHHHHHHHH
Confidence 99999999866553
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.35 E-value=1.3e-12 Score=101.65 Aligned_cols=88 Identities=15% Similarity=0.172 Sum_probs=76.4
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||+++ ++++|+|+.+||+.++..+.. ...++.++|.+++.++++++++.++++.|.+++.+..+|+|++|.++|+|
T Consensus 39 ~~Vvd~--~~~~Givt~~dl~~~~~~~~~-~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Gii 115 (128)
T 3gby_A 39 APVLDG--ERYLGMVHLSRLLEGRKGWPT-VKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVV 115 (128)
T ss_dssp EEEEET--TEEEEEEEHHHHHTTCSSSCC-TTCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEE
T ss_pred EEEEEC--CEEEEEEEHHHHHHHHhhCCc-ccCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEE
Confidence 589987 899999999999976654321 12468899988999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHh
Q 041526 81 TLEDVVEEIVG 91 (252)
Q Consensus 81 TleDIleeIvG 91 (252)
|..|+++++..
T Consensus 116 t~~dll~~l~~ 126 (128)
T 3gby_A 116 SRKRILGFLAE 126 (128)
T ss_dssp EHHHHHHHHHT
T ss_pred EHHHHHHHHHh
Confidence 99999998754
No 29
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.35 E-value=3.6e-12 Score=99.29 Aligned_cols=90 Identities=19% Similarity=0.285 Sum_probs=78.1
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++ .++++|+|+.+|++..+..+.. ...++.++|.+++.++++++++.++++.|.+++.+.++|+|+.|.++|+|
T Consensus 38 ~~Vvd--~~~~~Givt~~dl~~~~~~~~~-~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Gii 114 (133)
T 2ef7_A 38 VIVVD--GNKPVGIITERDIVKAIGKGKS-LETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGII 114 (133)
T ss_dssp EEEEE--TTEEEEEEEHHHHHHHHHTTCC-TTCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE
T ss_pred EEEEE--CCEEEEEEcHHHHHHHHhcCCC-cccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEE
Confidence 58998 3789999999999877654422 24578899988999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhh
Q 041526 81 TLEDVVEEIVGEI 93 (252)
Q Consensus 81 TleDIleeIvGei 93 (252)
|..|++..+...+
T Consensus 115 t~~dll~~~~~~~ 127 (133)
T 2ef7_A 115 SIRDITRAIDDMF 127 (133)
T ss_dssp EHHHHHHHHHHHC
T ss_pred EHHHHHHHHHHHH
Confidence 9999999886554
No 30
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.35 E-value=3.9e-12 Score=97.71 Aligned_cols=88 Identities=17% Similarity=0.250 Sum_probs=76.1
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++ .++++|+|+.+|++..+..+......++.++|.+++.++++++++.++++.|.+++.+.++|+|+ |.++|+|
T Consensus 35 ~~Vvd--~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvi 111 (125)
T 1pbj_A 35 SVVVK--EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVI 111 (125)
T ss_dssp EEEEE--TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEE
T ss_pred EEEEe--CCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEE
Confidence 58998 37899999999999776554322346789999889999999999999999999999999999998 9999999
Q ss_pred cchhHHHHHHh
Q 041526 81 TLEDVVEEIVG 91 (252)
Q Consensus 81 TleDIleeIvG 91 (252)
|..|++..+.+
T Consensus 112 t~~dl~~~l~~ 122 (125)
T 1pbj_A 112 SATDILRAKMA 122 (125)
T ss_dssp EHHHHHHHHC-
T ss_pred EHHHHHHHHHh
Confidence 99999998754
No 31
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.34 E-value=4.8e-12 Score=99.31 Aligned_cols=90 Identities=23% Similarity=0.387 Sum_probs=74.2
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC-cccccchhhhhcC------CceecCCCCcHHHHHHHHHHcCCceEEEecCC
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE-LLESTKVADMAHK------PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY 73 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~-~~~~~~l~~~~~r------~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~ 73 (252)
+||++++ ++++|+|+.+|++..+..+. .....++.++|.+ ++.++++++++.++++.|.+++.+.++|+|++
T Consensus 45 ~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~ 123 (144)
T 2nyc_A 45 VPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDV 123 (144)
T ss_dssp EEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTT
T ss_pred eeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCC
Confidence 5899754 78999999999998765431 0123568888865 68999999999999999999999999999999
Q ss_pred CCEEEEEcchhHHHHHHh
Q 041526 74 GGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 74 G~~vGIVTleDIleeIvG 91 (252)
|.++|+||..||+..+.+
T Consensus 124 g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 124 GRLVGVLTLSDILKYILL 141 (144)
T ss_dssp SBEEEEEEHHHHHHHHHH
T ss_pred CCEEEEEEHHHHHHHHHh
Confidence 999999999999999864
No 32
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.34 E-value=1.9e-12 Score=100.84 Aligned_cols=89 Identities=20% Similarity=0.362 Sum_probs=75.0
Q ss_pred CeEEecCCCCEEEEEEHHHHh-HHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLL-DYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGV 79 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll-~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGI 79 (252)
+||++++ ++++|+|+.+||+ ..+..+......++.++|.+++.++++++++.++++.|.+++.+.++|+|+ |.++|+
T Consensus 42 ~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Gi 119 (133)
T 1y5h_A 42 LPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGI 119 (133)
T ss_dssp EEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEE
T ss_pred EEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEE
Confidence 5899653 7899999999998 455443322346799999889999999999999999999999999999998 999999
Q ss_pred EcchhHHHHHHh
Q 041526 80 VTLEDVVEEIVG 91 (252)
Q Consensus 80 VTleDIleeIvG 91 (252)
||..||+..+.+
T Consensus 120 it~~dil~~l~~ 131 (133)
T 1y5h_A 120 VTEADIARHLPE 131 (133)
T ss_dssp EEHHHHHHTCC-
T ss_pred EEHHHHHHHHHh
Confidence 999999988754
No 33
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.33 E-value=3.6e-12 Score=100.61 Aligned_cols=88 Identities=19% Similarity=0.228 Sum_probs=76.2
Q ss_pred CeEEecCCC--CEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEE
Q 041526 1 VPVFEQRID--NIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVG 78 (252)
Q Consensus 1 lPV~~~~~d--~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vG 78 (252)
+||++++ + +++|+|+.+||+.++..+.. ...++.++|.+++.+++++ ++.++++.|.+++.+.++|+|++|.++|
T Consensus 39 ~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~-~~~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~G 115 (141)
T 2rih_A 39 AVLTARD-NPKRPVAVVSERDILRAVAQRLD-LDGPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVG 115 (141)
T ss_dssp EEEEETT-EEEEEEEEEEHHHHHHHHHTTCC-TTSBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEE
T ss_pred EEEEcCC-CcceeEEEEEHHHHHHHHhcCCC-CCCCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEE
Confidence 5899863 4 89999999999987654422 2457889998899999999 9999999999999999999999999999
Q ss_pred EEcchhHHHHHHh
Q 041526 79 VVTLEDVVEEIVG 91 (252)
Q Consensus 79 IVTleDIleeIvG 91 (252)
+||..||++++.+
T Consensus 116 iit~~dll~~~~~ 128 (141)
T 2rih_A 116 VLSIRDLCFERAI 128 (141)
T ss_dssp EEEHHHHHSCHHH
T ss_pred EEEHHHHHHHHHH
Confidence 9999999988754
No 34
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.33 E-value=3.6e-12 Score=103.70 Aligned_cols=94 Identities=21% Similarity=0.220 Sum_probs=78.0
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC-cccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE-LLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGV 79 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~-~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGI 79 (252)
+||++++ ++++|+|+.+||+.++..+. .....++.++|.+++.++++++++.++++.|.+++.+.++|+|+ |.++|+
T Consensus 61 ~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Gi 138 (165)
T 3fhm_A 61 VVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGI 138 (165)
T ss_dssp EEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEE
T ss_pred EEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEE
Confidence 5899753 78999999999998765421 12346788999889999999999999999999999999999999 999999
Q ss_pred EcchhHHHHHHhhhccC
Q 041526 80 VTLEDVVEEIVGEIFDE 96 (252)
Q Consensus 80 VTleDIleeIvGei~DE 96 (252)
||..||+..+.++...+
T Consensus 139 it~~dil~~~~~~~~~~ 155 (165)
T 3fhm_A 139 ISIGDVVKARIGEIEAE 155 (165)
T ss_dssp EEHHHHHHHTTCC----
T ss_pred EEHHHHHHHHHHHHHHH
Confidence 99999999987776543
No 35
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.32 E-value=2.8e-12 Score=106.31 Aligned_cols=94 Identities=19% Similarity=0.238 Sum_probs=79.9
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHc-CCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQK-GELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGV 79 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~-~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGI 79 (252)
+||++++ ++++|+|+.+||+..+.. .......++.++|.+++.++++++++.++++.|.+++.+.++|+|++|.++|+
T Consensus 43 ~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Gi 121 (184)
T 1pvm_A 43 LVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGI 121 (184)
T ss_dssp EEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEE
T ss_pred EEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEE
Confidence 5899754 789999999999976542 11123457889998889999999999999999999999999999999999999
Q ss_pred EcchhHHHHHHh-hhcc
Q 041526 80 VTLEDVVEEIVG-EIFD 95 (252)
Q Consensus 80 VTleDIleeIvG-ei~D 95 (252)
||..||++.+.+ ++.+
T Consensus 122 vt~~dll~~~~~~~~~~ 138 (184)
T 1pvm_A 122 VTLTDLSRYLSRASITD 138 (184)
T ss_dssp EEHHHHTTTSCHHHHHH
T ss_pred EEHHHHHHHHHhhhHHH
Confidence 999999998887 7654
No 36
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.32 E-value=2.4e-12 Score=114.17 Aligned_cols=87 Identities=22% Similarity=0.315 Sum_probs=73.6
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++ ++++|+|+.+|++... ...++.++|.+++.+|++++++.++++.|++++.+.++|||++|.++|+|
T Consensus 174 ~~Vvd~~-~~lvGivt~~dll~~~------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiv 246 (278)
T 2yvy_A 174 IYVVDEK-GRLKGVLSLRDLIVAD------PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIV 246 (278)
T ss_dssp EEEECTT-CBEEEEEEHHHHHHSC------TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEE
T ss_pred EEEECCC-CCEEEEEEHHHHhcCC------CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEE
Confidence 5899764 7899999999998531 13568889988999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhc
Q 041526 81 TLEDVVEEIVGEIF 94 (252)
Q Consensus 81 TleDIleeIvGei~ 94 (252)
|.+||++.+.++..
T Consensus 247 T~~Dil~~i~~e~~ 260 (278)
T 2yvy_A 247 TVDDVLDVLEAEAT 260 (278)
T ss_dssp EHHHHHHHC-----
T ss_pred EHHHHHHHHHHHhH
Confidence 99999999877654
No 37
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.32 E-value=5.1e-12 Score=98.85 Aligned_cols=91 Identities=18% Similarity=0.391 Sum_probs=76.6
Q ss_pred CeEEecCCCCEEEEEEHHHH-hHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcC-----CceEEEecCCC
Q 041526 1 VPVFEQRIDNIVGIAYAMDL-LDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRK-----VHMAVVLNEYG 74 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDl-l~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~-----~~~AiVVDE~G 74 (252)
+||++++ ++++|+|+.+|+ +..+..+. ....++.++|.+++.++++++++.++++.|.+++ .+.++|+|+.|
T Consensus 42 ~~Vvd~~-~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g 119 (138)
T 2p9m_A 42 LPVIDDE-NKVIGIVTTTDIGYNLIRDKY-TLETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNN 119 (138)
T ss_dssp EEEECTT-CBEEEEEEHHHHHHHHTTTCC-CSSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTS
T ss_pred EEEECCC-CeEEEEEEHHHHHHHHHhhcc-cCCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCC
Confidence 5899753 789999999999 87654332 1345789999889999999999999999999999 99999999899
Q ss_pred CEEEEEcchhHHHHHHhhh
Q 041526 75 GTVGVVTLEDVVEEIVGEI 93 (252)
Q Consensus 75 ~~vGIVTleDIleeIvGei 93 (252)
.++|+||..|++..+.++|
T Consensus 120 ~~~Giit~~dll~~~~~~i 138 (138)
T 2p9m_A 120 KLVGIISDGDIIRTISKII 138 (138)
T ss_dssp BEEEEEEHHHHHHHHHHC-
T ss_pred eEEEEEEHHHHHHHHHhhC
Confidence 9999999999999886643
No 38
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.31 E-value=9.6e-12 Score=99.66 Aligned_cols=89 Identities=18% Similarity=0.289 Sum_probs=75.4
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC-cccccchhhhhc------CCceecCCCCcHHHHHHHHHHcCCceEEEecCC
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE-LLESTKVADMAH------KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY 73 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~-~~~~~~l~~~~~------r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~ 73 (252)
+||++++ ++++|+|+.+||+..+..+. .....++.++|. +++.++++++++.++++.|.+++.+.++|+|++
T Consensus 55 ~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 133 (152)
T 2uv4_A 55 LPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDEN 133 (152)
T ss_dssp EEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTT
T ss_pred EeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCC
Confidence 5899753 78999999999998765431 012346788885 688999999999999999999999999999999
Q ss_pred CCEEEEEcchhHHHHHH
Q 041526 74 GGTVGVVTLEDVVEEIV 90 (252)
Q Consensus 74 G~~vGIVTleDIleeIv 90 (252)
|.++|+||..||+..+.
T Consensus 134 g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 134 DVVKGIVSLSDILQALV 150 (152)
T ss_dssp SBEEEEEEHHHHHHHHC
T ss_pred CeEEEEEEHHHHHHHHH
Confidence 99999999999999874
No 39
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.31 E-value=4.1e-12 Score=100.42 Aligned_cols=92 Identities=20% Similarity=0.248 Sum_probs=74.6
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcC-------------CcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKG-------------ELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMA 67 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~-------------~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~A 67 (252)
+||++++ ++++|+|+.+||+..+..+ ......++.++|.+++.++++++++.++++.|.+++.+.+
T Consensus 41 ~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l 119 (152)
T 4gqw_A 41 FPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRL 119 (152)
T ss_dssp EEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEE
T ss_pred EEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEE
Confidence 5899764 7899999999998532111 0012356899998888999999999999999999999999
Q ss_pred EEecCCCCEEEEEcchhHHHHHHhhh
Q 041526 68 VVLNEYGGTVGVVTLEDVVEEIVGEI 93 (252)
Q Consensus 68 iVVDE~G~~vGIVTleDIleeIvGei 93 (252)
+|+|+.|.++|+||..||+..+....
T Consensus 120 ~Vvd~~g~~~Giit~~dil~~~~~~~ 145 (152)
T 4gqw_A 120 PVVDSDGKLVGIITRGNVVRAALQIK 145 (152)
T ss_dssp EEECTTSBEEEEEEHHHHHHHHHC--
T ss_pred EEECCCCcEEEEEEHHHHHHHHHhcc
Confidence 99999999999999999999987644
No 40
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.31 E-value=7.7e-12 Score=101.11 Aligned_cols=90 Identities=17% Similarity=0.204 Sum_probs=77.5
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEecCCC---C
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYG---G 75 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G---~ 75 (252)
+||++++ ++++|+|+.+||+..+..+......++.++|.+ ++.++++++++.++++.|.+++.+.++|+|+.| .
T Consensus 50 ~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~ 128 (159)
T 3fv6_A 50 LFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFE 128 (159)
T ss_dssp EEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEE
T ss_pred EEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCccee
Confidence 5899753 789999999999987644332234678999977 889999999999999999999999999999988 9
Q ss_pred EEEEEcchhHHHHHHh
Q 041526 76 TVGVVTLEDVVEEIVG 91 (252)
Q Consensus 76 ~vGIVTleDIleeIvG 91 (252)
++|+||..||+..+..
T Consensus 129 ~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 129 VIGRVTKTNMTKILVS 144 (159)
T ss_dssp EEEEEEHHHHHHHHHH
T ss_pred EEEEEEHHHHHHHHHH
Confidence 9999999999998854
No 41
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.30 E-value=9.6e-12 Score=98.97 Aligned_cols=91 Identities=19% Similarity=0.179 Sum_probs=75.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC-----cccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCC
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE-----LLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGG 75 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~-----~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~ 75 (252)
+||+++ .++++|+|+.+||+..+.... .....++.++|.+++.++++++++.++++.|.+++. .+|+|+.|.
T Consensus 51 ~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~ 127 (150)
T 3lqn_A 51 IPVLDP-MYKLHGLISTAMILDGILGLERIEFERLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGY 127 (150)
T ss_dssp EEEECT-TCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCB
T ss_pred EEEECC-CCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCc
Confidence 589975 378999999999998764211 112456889998899999999999999999998875 888999999
Q ss_pred EEEEEcchhHHHHHHhhhc
Q 041526 76 TVGVVTLEDVVEEIVGEIF 94 (252)
Q Consensus 76 ~vGIVTleDIleeIvGei~ 94 (252)
++|+||..||+..+.+.+.
T Consensus 128 ~~Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 128 FEGILTRRAILKLLNKKVR 146 (150)
T ss_dssp EEEEEEHHHHHHHHHHHC-
T ss_pred EEEEEEHHHHHHHHHHHhH
Confidence 9999999999999877664
No 42
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.29 E-value=9e-12 Score=99.92 Aligned_cols=92 Identities=18% Similarity=0.325 Sum_probs=76.3
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcc----cccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELL----ESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGT 76 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~----~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~ 76 (252)
+||++++ ++++|+|+.+||+..+..+... ...++.++|.+++.++++++++.++++.|.+++ .++|+|+.|.+
T Consensus 51 ~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~ 127 (156)
T 3ctu_A 51 VPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIF 127 (156)
T ss_dssp EEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBE
T ss_pred EeEECCC-CEEEEEEcHHHHHHHHHhccccccccccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeE
Confidence 5899753 7899999999999876532110 135688999889999999999999999999875 58889999999
Q ss_pred EEEEcchhHHHHHHhhhcc
Q 041526 77 VGVVTLEDVVEEIVGEIFD 95 (252)
Q Consensus 77 vGIVTleDIleeIvGei~D 95 (252)
+|+||..||++.+.+.+.+
T Consensus 128 ~Giit~~dil~~l~~~~~~ 146 (156)
T 3ctu_A 128 QGIITRKSILKAVNALLHD 146 (156)
T ss_dssp EEEEETTHHHHHHHHHSCC
T ss_pred EEEEEHHHHHHHHHHHHHh
Confidence 9999999999999877754
No 43
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.28 E-value=1.8e-11 Score=95.73 Aligned_cols=89 Identities=17% Similarity=0.274 Sum_probs=74.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHH-HcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYV-QKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGV 79 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~-~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGI 79 (252)
+||++ .++++|+|+.+||+..+ ..+......++.++|.+++.++++++++.++++.|.+++.+.++|+| .|.++|+
T Consensus 43 ~~Vvd--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Gi 119 (135)
T 2rc3_A 43 LLVMK--DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGL 119 (135)
T ss_dssp EEEEE--TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEE
T ss_pred EEEEE--CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEE
Confidence 58997 37899999999998643 33221234678899988999999999999999999999999999999 6999999
Q ss_pred EcchhHHHHHHhh
Q 041526 80 VTLEDVVEEIVGE 92 (252)
Q Consensus 80 VTleDIleeIvGe 92 (252)
||..|++..+.++
T Consensus 120 it~~dll~~~~~~ 132 (135)
T 2rc3_A 120 LSIGDLVKDAISQ 132 (135)
T ss_dssp EEHHHHHHHHHC-
T ss_pred EEHHHHHHHHHhc
Confidence 9999999988653
No 44
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.28 E-value=1.6e-11 Score=99.53 Aligned_cols=91 Identities=20% Similarity=0.234 Sum_probs=76.5
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHc--------CCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecC
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQK--------GELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNE 72 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~--------~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE 72 (252)
+||+++ .++++|+|+.+||+..+.. .......++.++|.+++.++++++++.+++..|.+++.+.++|+|+
T Consensus 39 ~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 117 (160)
T 2o16_A 39 VPIVDA-NKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK 117 (160)
T ss_dssp EEEECT-TCBEEEEEEHHHHHHHHHHHCC---------CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET
T ss_pred EEEEcC-CCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC
Confidence 589975 3789999999999876532 0111245789999889999999999999999999999999999998
Q ss_pred CCCEEEEEcchhHHHHHHhhh
Q 041526 73 YGGTVGVVTLEDVVEEIVGEI 93 (252)
Q Consensus 73 ~G~~vGIVTleDIleeIvGei 93 (252)
|.++|+||..||+..+...+
T Consensus 118 -g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 118 -DVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp -TEEEEEECHHHHHHHHHHHH
T ss_pred -CEEEEEEEHHHHHHHHHHHh
Confidence 99999999999999987655
No 45
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.28 E-value=3.5e-12 Score=104.45 Aligned_cols=90 Identities=23% Similarity=0.282 Sum_probs=74.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC----------------------cccccchhhhhcCCceecCCCCcHHHHHHH
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE----------------------LLESTKVADMAHKPAYFVPDSMSVWNLLRE 58 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~----------------------~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~ 58 (252)
+||++++ ++++|+|+.+|++++..... .....++.++|.+++.+|++++++.++++.
T Consensus 52 ~pVvd~~-g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~ 130 (170)
T 4esy_A 52 APVVDQN-GHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQ 130 (170)
T ss_dssp EEEECTT-SCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHH
T ss_pred EEEEcCC-ccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHH
Confidence 5999764 78999999999986532110 001246888999999999999999999999
Q ss_pred HHHcCCceEEEecCCCCEEEEEcchhHHHHHHhh
Q 041526 59 FRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVGE 92 (252)
Q Consensus 59 mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvGe 92 (252)
|.+++.+..+|+|+ |.++||||..||++.|+.+
T Consensus 131 m~~~~~~~lpVvd~-g~lvGivt~~Dil~~l~~~ 163 (170)
T 4esy_A 131 MRRHGIHRIPVVQD-GVPVGIVTRRDLLKLLLLE 163 (170)
T ss_dssp HHHTTCSEEEEEET-TEEEEEEEHHHHTTTSCCC
T ss_pred HHHcCCcEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 99999999999985 9999999999999988654
No 46
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.27 E-value=2.3e-11 Score=97.59 Aligned_cols=94 Identities=20% Similarity=0.260 Sum_probs=79.3
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC-cccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE-LLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGV 79 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~-~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGI 79 (252)
+||.+ .++++|+|+.+||+.++.... .....++.++|.+++.++++++++.++++.|.+++.+.++|+| .|.++|+
T Consensus 47 ~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Gi 123 (157)
T 4fry_A 47 LLVVD--GDDIAGIVTERDYARKVVLQERSSKATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGL 123 (157)
T ss_dssp EEEES--SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEE
T ss_pred EEEee--CCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEE
Confidence 47854 479999999999998764322 1134679999988999999999999999999999999999999 6999999
Q ss_pred EcchhHHHHHHhhhccCC
Q 041526 80 VTLEDVVEEIVGEIFDES 97 (252)
Q Consensus 80 VTleDIleeIvGei~DE~ 97 (252)
||..||+..+.+....+.
T Consensus 124 it~~dil~~l~~~~~~~~ 141 (157)
T 4fry_A 124 ISIGDLVKSVIADQQFTI 141 (157)
T ss_dssp EEHHHHHHHHHTTCCCCC
T ss_pred EEHHHHHHHHHHHHHhhH
Confidence 999999999988776544
No 47
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.26 E-value=2.4e-11 Score=97.83 Aligned_cols=90 Identities=17% Similarity=0.172 Sum_probs=76.0
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHc---------------CCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCc
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQK---------------GELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVH 65 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~---------------~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~ 65 (252)
+||++++ +++|+|+.+||+.++.. .......++.++|.+ +.++++++++.++++.|.+++.+
T Consensus 51 ~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~ 127 (157)
T 1o50_A 51 VYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQ 127 (157)
T ss_dssp EEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCS
T ss_pred EEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCc
Confidence 5899874 89999999999976431 011134578999977 99999999999999999999999
Q ss_pred eEEEecCCCCEEEEEcchhHHHHHHhhh
Q 041526 66 MAVVLNEYGGTVGVVTLEDVVEEIVGEI 93 (252)
Q Consensus 66 ~AiVVDE~G~~vGIVTleDIleeIvGei 93 (252)
..+|+|+.|.++|+||..||+..+.+.+
T Consensus 128 ~lpVvd~~g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 128 EMPVVDEKGEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp EEEEECTTSCEEEEEEHHHHHHHHHHSC
T ss_pred EEEEEcCCCEEEEEEEHHHHHHHHHHhh
Confidence 9999998999999999999999987654
No 48
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.26 E-value=2.1e-11 Score=97.52 Aligned_cols=92 Identities=17% Similarity=0.217 Sum_probs=76.6
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC-----cccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCC
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE-----LLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGG 75 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~-----~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~ 75 (252)
+||+++ .++++|+|+.+||+..+..+. .....++.++|.+++.++++++++.++++.|.+++. ++|+|+.|.
T Consensus 47 ~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~ 123 (157)
T 2emq_A 47 IPVLDT-SYKLHGLISMTMMMDAILGLERIEFERLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGY 123 (157)
T ss_dssp EEEECT-TCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSS
T ss_pred EEEEcC-CCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCe
Confidence 589975 378999999999997654321 112456889998899999999999999999999876 788999999
Q ss_pred EEEEEcchhHHHHHHhhhcc
Q 041526 76 TVGVVTLEDVVEEIVGEIFD 95 (252)
Q Consensus 76 ~vGIVTleDIleeIvGei~D 95 (252)
++|+||..||+..+.+.+..
T Consensus 124 ~~Giit~~dil~~~~~~~~~ 143 (157)
T 2emq_A 124 FAGIFTRREVLKQLNKQLHR 143 (157)
T ss_dssp EEEEEEHHHHHHHHHHTTCC
T ss_pred EEEEEEHHHHHHHHHHHhhc
Confidence 99999999999999877653
No 49
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.25 E-value=1.2e-11 Score=100.70 Aligned_cols=94 Identities=21% Similarity=0.245 Sum_probs=77.1
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC---------------------------cccccchhhhhcCCceecCCCCcHH
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE---------------------------LLESTKVADMAHKPAYFVPDSMSVW 53 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~---------------------------~~~~~~l~~~~~r~~~~Vpe~~~l~ 53 (252)
+||++++ ++++|+|+.+||+....... .....++.++|.+++.++++++++.
T Consensus 40 ~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~ 118 (180)
T 3sl7_A 40 LPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLE 118 (180)
T ss_dssp EEEECTT-CBEEEEEEHHHHTCC-------------------CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHH
T ss_pred EEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccchhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHH
Confidence 5899763 78999999999984311000 0124568999988899999999999
Q ss_pred HHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHhhhcc
Q 041526 54 NLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVGEIFD 95 (252)
Q Consensus 54 ~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvGei~D 95 (252)
++++.|.+++.+.++|+|+.|.++|+||..||+.++......
T Consensus 119 ~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~~~ 160 (180)
T 3sl7_A 119 DAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRN 160 (180)
T ss_dssp HHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999876543
No 50
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.23 E-value=1.6e-11 Score=98.10 Aligned_cols=85 Identities=19% Similarity=0.279 Sum_probs=73.6
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++ ++++|+|+.+||+..+..+......++.++|.+++.++++++++.++++.|.+++.+.++|+|+. .++|+|
T Consensus 64 ~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Gii 141 (149)
T 3k2v_A 64 TAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVV 141 (149)
T ss_dssp EEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEE
T ss_pred EEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEE
Confidence 5899753 78999999999998776543223567999998889999999999999999999999999999975 999999
Q ss_pred cchhHHH
Q 041526 81 TLEDVVE 87 (252)
Q Consensus 81 TleDIle 87 (252)
|..||++
T Consensus 142 t~~dil~ 148 (149)
T 3k2v_A 142 HMHDLLR 148 (149)
T ss_dssp EHHHHTC
T ss_pred EHHHhhc
Confidence 9999874
No 51
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.23 E-value=2.7e-11 Score=107.96 Aligned_cols=91 Identities=23% Similarity=0.369 Sum_probs=78.3
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC-cccccchhhhhcC------CceecCCCCcHHHHHHHHHHcCCceEEEecCC
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE-LLESTKVADMAHK------PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY 73 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~-~~~~~~l~~~~~r------~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~ 73 (252)
+||+++ .++++|+|+.+|++.++..+. .....++.++|.+ ++.++++++++.++++.|.+++.+.++|+|++
T Consensus 224 ~pVvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~ 302 (323)
T 3t4n_C 224 VPIIDE-NGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDV 302 (323)
T ss_dssp EEEECT-TCBEEEEEETTHHHHHHHTTHHHHTTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTT
T ss_pred EEEECC-CCeEEEEEeHHHHHHHHhhchhhhccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCC
Confidence 589975 378999999999998765432 0123468899976 78999999999999999999999999999999
Q ss_pred CCEEEEEcchhHHHHHHhh
Q 041526 74 GGTVGVVTLEDVVEEIVGE 92 (252)
Q Consensus 74 G~~vGIVTleDIleeIvGe 92 (252)
|.++|+||..||+..++++
T Consensus 303 ~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 303 GRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp SBEEEEEEHHHHHHHHHHC
T ss_pred CcEEEEEEHHHHHHHHHhc
Confidence 9999999999999999875
No 52
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.22 E-value=2.7e-11 Score=99.27 Aligned_cols=93 Identities=19% Similarity=0.297 Sum_probs=77.1
Q ss_pred CeEEe-cCCCCEEEEEEHHHHhHHHHcCC------------------------cccccchhhhhcCCceecCCCCcHHHH
Q 041526 1 VPVFE-QRIDNIVGIAYAMDLLDYVQKGE------------------------LLESTKVADMAHKPAYFVPDSMSVWNL 55 (252)
Q Consensus 1 lPV~~-~~~d~IvGiv~~kDll~~~~~~~------------------------~~~~~~l~~~~~r~~~~Vpe~~~l~~l 55 (252)
+||++ ++.++++|+|+.+||+..+..+. .....++.++|.+++.+|++++++.++
T Consensus 51 ~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a 130 (185)
T 2j9l_A 51 FPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIV 130 (185)
T ss_dssp EEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHH
T ss_pred eeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHH
Confidence 58984 33579999999999997654210 012356888998899999999999999
Q ss_pred HHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHhhhc
Q 041526 56 LREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVGEIF 94 (252)
Q Consensus 56 L~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvGei~ 94 (252)
+..|.+++.+.++|+| +|.++|+||..||+..+.+...
T Consensus 131 ~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~~~ 168 (185)
T 2j9l_A 131 VDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQMAN 168 (185)
T ss_dssp HHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHCC
T ss_pred HHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHhhc
Confidence 9999999999999998 7999999999999999876543
No 53
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.22 E-value=3.4e-11 Score=97.00 Aligned_cols=93 Identities=14% Similarity=0.080 Sum_probs=76.0
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCc-----ccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCC
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGEL-----LESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGG 75 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~-----~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~ 75 (252)
+||++++ ++++|+|+.+||+..+..... ....++.++|.+++.++++++++.++++.|.+++. ++|+|+.|.
T Consensus 50 ~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~ 126 (159)
T 1yav_A 50 IPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQV 126 (159)
T ss_dssp EEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCB
T ss_pred EEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCe
Confidence 5899763 689999999999987643211 12457899998899999999999999999998765 888998999
Q ss_pred EEEEEcchhHHHHHHhhhccC
Q 041526 76 TVGVVTLEDVVEEIVGEIFDE 96 (252)
Q Consensus 76 ~vGIVTleDIleeIvGei~DE 96 (252)
++|+||..||+..+.+.+...
T Consensus 127 ~vGiit~~dil~~~~~~~~~~ 147 (159)
T 1yav_A 127 FEGIFTRRVVLKELNKHIRSL 147 (159)
T ss_dssp EEEEEEHHHHHHHHHHHC---
T ss_pred EEEEEEHHHHHHHHHHHHHhh
Confidence 999999999999998777543
No 54
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.21 E-value=7e-11 Score=102.34 Aligned_cols=94 Identities=19% Similarity=0.362 Sum_probs=79.1
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCc--------------ccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCce
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGEL--------------LESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHM 66 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~--------------~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~ 66 (252)
+||++++.++++|+++.+|++..+..+.. ....+++++|.+++.++++++++.++++.|++++.+.
T Consensus 38 lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~ 117 (280)
T 3kh5_A 38 LPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGG 117 (280)
T ss_dssp EEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSE
T ss_pred eeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCE
Confidence 59998656899999999999976532110 0124688999889999999999999999999999999
Q ss_pred EEEecCCCCEEEEEcchhHHHHHHhhhc
Q 041526 67 AVVLNEYGGTVGVVTLEDVVEEIVGEIF 94 (252)
Q Consensus 67 AiVVDE~G~~vGIVTleDIleeIvGei~ 94 (252)
++|+|++|.++|++|..|++..+.+...
T Consensus 118 ~~Vvd~~~~~~Givt~~dl~~~~~~~~~ 145 (280)
T 3kh5_A 118 APIVNDENQLISLITERDVIRALLDKID 145 (280)
T ss_dssp EEEECTTCBEEEEEEHHHHHHHHGGGSC
T ss_pred EEEEcCCCEEEEEEEHHHHHHHHhhcCC
Confidence 9999999999999999999998876554
No 55
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.21 E-value=3.4e-11 Score=107.60 Aligned_cols=87 Identities=22% Similarity=0.248 Sum_probs=76.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++ ++++|+|+.+|++.+. ...++.++|.+++.+|++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 176 ~pVvd~~-~~lvGivt~~dll~~~------~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiI 248 (286)
T 2oux_A 176 VYVVDQE-NHLVGVISLRDLIVND------DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIV 248 (286)
T ss_dssp EEEECTT-CBEEEEEEHHHHTTSC------TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE
T ss_pred EEEEcCC-CeEEEEEEHHHHHcCC------CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEE
Confidence 5899763 7899999999998641 23568999988999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhc
Q 041526 81 TLEDVVEEIVGEIF 94 (252)
Q Consensus 81 TleDIleeIvGei~ 94 (252)
|..||++.+.++..
T Consensus 249 T~~Dil~~i~~e~~ 262 (286)
T 2oux_A 249 TVDDIIDVIDDEAA 262 (286)
T ss_dssp EHHHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHhH
Confidence 99999999866553
No 56
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.20 E-value=2.7e-11 Score=115.96 Aligned_cols=138 Identities=17% Similarity=0.230 Sum_probs=99.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++ ++++|+|+.+|++.. . ...+++++|.+++.+|++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 194 ipVvd~~-~~lvGiVt~~Dll~~---~---~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiI 266 (473)
T 2zy9_A 194 IYVVDEK-GRLKGVLSLRDLIVA---D---PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIV 266 (473)
T ss_dssp EEEECTT-SBEEEEEEHHHHHHS---C---TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEE
T ss_pred EEEECCC-CcEEEEEEHHHHhcC---C---CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEE
Confidence 5899864 889999999999853 1 23578999988999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhccCCCcHHHHhhhcccEEEecCceEEEeCCcChHHhHhhcCCCCCCCCccCCHHHHHHHHhCC
Q 041526 81 TLEDVVEEIVGEIFDESDSKEEIQKKTGYIVMRAEGIYDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGY 156 (252)
Q Consensus 81 TleDIleeIvGei~DE~d~~~~~~~~~~~i~~~~dg~~~v~G~~~L~dl~~~lgi~l~~~~~~~TLaGlil~~lg~ 156 (252)
|.+|+++.+.++..++.. . . ..+. ..++.|..++. +..+.+.+++.+.. .-..+++|+++..+++
T Consensus 267 T~~Dil~~i~~e~~ed~~---~-~---~~i~-~~~~~~~~~~v--~~~~~~R~~wl~~~-~~~~~l~~~vi~~fe~ 331 (473)
T 2zy9_A 267 TVDDVLDVLEAEATEDIH---K-L---GAVD-VPDLVYSEAGP--VALWLARVRWLVIL-ILTGMVTSSILQGFES 331 (473)
T ss_dssp EHHHHHHHHHHHHHHHHH---H-H---TTCC-CTTCCSSSCCH--HHHHHHHHHHHHHH-HHHHHHHHHHHHHTHH
T ss_pred ehHhhHHHHHHHhhhhhh---h-c---cccc-cCcchhhhhHH--HHHHHHHhHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999876542211 0 0 1111 12334443332 44455555443221 1356888888887653
No 57
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.20 E-value=2.5e-11 Score=106.94 Aligned_cols=94 Identities=17% Similarity=0.280 Sum_probs=80.0
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcC------CcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCC
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKG------ELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYG 74 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~------~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G 74 (252)
+||+++ .++++|+|+.+|++..+... ......++.++|.+++.++++++++.++++.|.+++.+.++|+|++|
T Consensus 190 ~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g 268 (296)
T 3ddj_A 190 LPVIDD-DNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDN 268 (296)
T ss_dssp EEEECT-TSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTS
T ss_pred EEEEcC-CCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCC
Confidence 589975 37899999999999876421 00123568899988999999999999999999999999999999999
Q ss_pred CEEEEEcchhHHHHHHhhhcc
Q 041526 75 GTVGVVTLEDVVEEIVGEIFD 95 (252)
Q Consensus 75 ~~vGIVTleDIleeIvGei~D 95 (252)
.++|+||..||++++.+.+..
T Consensus 269 ~~~Giit~~Dil~~l~~~~~~ 289 (296)
T 3ddj_A 269 TIRGIITERDLLIALHHILVM 289 (296)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH
T ss_pred eEEEEEcHHHHHHHHHHHhcc
Confidence 999999999999999887754
No 58
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.19 E-value=1e-10 Score=103.02 Aligned_cols=90 Identities=17% Similarity=0.235 Sum_probs=78.5
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++ ++++|+++.+|++..+.... ...++.++|.+++.++++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 127 lpVvd~~-~~lvGivt~~dl~~~~~~~~--~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Giv 203 (296)
T 3ddj_A 127 LPVVDIN-DKPVGIVTEREFLLLYKDLD--EIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIV 203 (296)
T ss_dssp EEEECTT-SCEEEEEEHHHHGGGGGGSC--CCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE
T ss_pred EEEEcCC-CcEEEEEeHHHHHHhhhccc--ccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEE
Confidence 5899753 78999999999997665432 24579999989999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhh
Q 041526 81 TLEDVVEEIVGEI 93 (252)
Q Consensus 81 TleDIleeIvGei 93 (252)
|..|++..+...+
T Consensus 204 t~~dl~~~~~~~~ 216 (296)
T 3ddj_A 204 TVVNAIKQLAKAV 216 (296)
T ss_dssp EHHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHH
Confidence 9999999986443
No 59
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.19 E-value=8e-11 Score=94.42 Aligned_cols=92 Identities=16% Similarity=0.226 Sum_probs=75.5
Q ss_pred CeEEec-CCCCEEEEEEHHHHhHHHHcCCcc----cccchhhhhcCC------ceecCCCCcHHHHHHHHHHcCCceEEE
Q 041526 1 VPVFEQ-RIDNIVGIAYAMDLLDYVQKGELL----ESTKVADMAHKP------AYFVPDSMSVWNLLREFRIRKVHMAVV 69 (252)
Q Consensus 1 lPV~~~-~~d~IvGiv~~kDll~~~~~~~~~----~~~~l~~~~~r~------~~~Vpe~~~l~~lL~~mr~~~~~~AiV 69 (252)
+||+++ +.++++|+|+.+||+..+..+... ...++.++|.++ +.++++++++.++++.|.+++.+.++|
T Consensus 47 ~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpV 126 (164)
T 2pfi_A 47 YPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFV 126 (164)
T ss_dssp EEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEE
T ss_pred eeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEE
Confidence 589975 357899999999999776432210 124688888665 789999999999999999999999999
Q ss_pred ecCCCCEEEEEcchhHHHHHHhhh
Q 041526 70 LNEYGGTVGVVTLEDVVEEIVGEI 93 (252)
Q Consensus 70 VDE~G~~vGIVTleDIleeIvGei 93 (252)
+| .|.++|+||..||+..+.+..
T Consensus 127 vd-~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 127 TS-RGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp EE-TTEEEEEEEHHHHHHHHHHHH
T ss_pred EE-CCEEEEEEEHHHHHHHHHhhh
Confidence 99 699999999999999987755
No 60
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.13 E-value=6.1e-11 Score=102.70 Aligned_cols=87 Identities=14% Similarity=0.241 Sum_probs=74.0
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC-----------cccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE-----------LLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVV 69 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~-----------~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiV 69 (252)
+||++ .++++|+|+.+|++..+..+. .....++.++|.+++.++++++++.++++.|.+++.+.++|
T Consensus 182 ~~Vv~--~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~V 259 (280)
T 3kh5_A 182 LPVVS--EGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPV 259 (280)
T ss_dssp EEEEE--TTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEE
T ss_pred EEEEE--CCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEE
Confidence 58884 378999999999998764211 00235688999899999999999999999999999999999
Q ss_pred ecCCCCEEEEEcchhHHHHH
Q 041526 70 LNEYGGTVGVVTLEDVVEEI 89 (252)
Q Consensus 70 VDE~G~~vGIVTleDIleeI 89 (252)
+|++|.++|+||..||+.++
T Consensus 260 vd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 260 VDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp ECTTCBEEEEEEHHHHGGGG
T ss_pred ECCCCeEEEEEeHHHHHHhh
Confidence 99999999999999999865
No 61
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.11 E-value=2.8e-10 Score=101.77 Aligned_cols=93 Identities=16% Similarity=0.261 Sum_probs=78.4
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC-cccccchhhhhcC------CceecCCCCcHHHHHHHHHHcCCceEEEecCC
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE-LLESTKVADMAHK------PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY 73 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~-~~~~~~l~~~~~r------~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~ 73 (252)
+||+++ .++++|+|+.+||+.++..+. .....++.++|.+ ++.++++++++.++++.|.+++.+.++|+|++
T Consensus 219 ~~Vvd~-~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~ 297 (334)
T 2qrd_G 219 VPIVNS-EGTLLNVYESVDVMHLIQDGDYSNLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDEN 297 (334)
T ss_dssp EEEECT-TCBEEEEEETHHHHHHHTTSCGGGGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTT
T ss_pred EEEEcC-CCcEEEEEEHHHHHHHhhccccccccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCC
Confidence 588875 368999999999998765432 1124568889963 78999999999999999999999999999999
Q ss_pred CCEEEEEcchhHHHHHHhhhc
Q 041526 74 GGTVGVVTLEDVVEEIVGEIF 94 (252)
Q Consensus 74 G~~vGIVTleDIleeIvGei~ 94 (252)
|.++|+||..||+..+.+...
T Consensus 298 g~l~Giit~~dil~~~~~~~~ 318 (334)
T 2qrd_G 298 LKLEGILSLADILNYIIYDKT 318 (334)
T ss_dssp CBEEEEEEHHHHHHHHHSCCC
T ss_pred CeEEEEEeHHHHHHHHHhccc
Confidence 999999999999999876553
No 62
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.08 E-value=2.4e-10 Score=110.60 Aligned_cols=86 Identities=21% Similarity=0.255 Sum_probs=75.1
Q ss_pred CeEEecC-CCCEEEEEEHHHHhHHHHcCCcccccchhhhhcC-CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEE
Q 041526 1 VPVFEQR-IDNIVGIAYAMDLLDYVQKGELLESTKVADMAHK-PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVG 78 (252)
Q Consensus 1 lPV~~~~-~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r-~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vG 78 (252)
+||+++. .++++|+|+.+||+.. .. ...++.++|++ +++++++++++.++++.|++++.+.++|||++|.++|
T Consensus 147 ~pVvd~g~~~~lvGiVt~rDl~~~--~~---~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~G 221 (511)
T 3usb_A 147 VPVVNNLDERKLVGIITNRDMRFI--QD---YSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQG 221 (511)
T ss_dssp EEEESCTTTCBEEEEEEHHHHTTC--CC---SSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEE
T ss_pred EEEEecCCCCEEEEEEEehHhhhh--cc---CCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEee
Confidence 5999751 4799999999999741 11 24679999976 8999999999999999999999999999999999999
Q ss_pred EEcchhHHHHHHh
Q 041526 79 VVTLEDVVEEIVG 91 (252)
Q Consensus 79 IVTleDIleeIvG 91 (252)
+||.+||++++.-
T Consensus 222 iIT~~Dil~~~~~ 234 (511)
T 3usb_A 222 LITIKDIEKVIEF 234 (511)
T ss_dssp EEEHHHHHHHHHC
T ss_pred eccHHHHHHhhhc
Confidence 9999999999853
No 63
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.07 E-value=4.3e-10 Score=100.13 Aligned_cols=130 Identities=17% Similarity=0.311 Sum_probs=94.4
Q ss_pred CeEEecCCC----CEEEEEEHHHHhHHHHcC---Ccccccchhhh---hcCCceecCCCCcHHHHHHHHHHcCCceEEEe
Q 041526 1 VPVFEQRID----NIVGIAYAMDLLDYVQKG---ELLESTKVADM---AHKPAYFVPDSMSVWNLLREFRIRKVHMAVVL 70 (252)
Q Consensus 1 lPV~~~~~d----~IvGiv~~kDll~~~~~~---~~~~~~~l~~~---~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVV 70 (252)
+||++++.. +++|+|+.+|++..+... ......++.++ |.+++.++++++++.++++.|.+++.+.++|+
T Consensus 148 lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVv 227 (323)
T 3t4n_C 148 IPLIDQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPII 227 (323)
T ss_dssp EEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred EEEEecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEE
Confidence 589986422 299999999999765421 11123468888 87889999999999999999999999999999
Q ss_pred cCCCCEEEEEcchhHHHHHHhhhccCCC-cHHHHhhhcccEEEecCceEEEeCCcChHHhHhhc
Q 041526 71 NEYGGTVGVVTLEDVVEEIVGEIFDESD-SKEEIQKKTGYIVMRAEGIYDVDANTSIDQLSEDL 133 (252)
Q Consensus 71 DE~G~~vGIVTleDIleeIvGei~DE~d-~~~~~~~~~~~i~~~~dg~~~v~G~~~L~dl~~~l 133 (252)
|++|.++|+||..|++..+.+...+..+ .-.++..... ....+.+.+.+.+++.++.+.+
T Consensus 228 d~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~---~~~~~~~~v~~~~~l~~~~~~m 288 (323)
T 3t4n_C 228 DENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRS---DDFEGVYTCTKNDKLSTIMDNI 288 (323)
T ss_dssp CTTCBEEEEEETTHHHHHHHTTHHHHTTSBHHHHGGGSC---TTCCCCEEECTTCBHHHHHHHH
T ss_pred CCCCeEEEEEeHHHHHHHHhhchhhhccCCHHHHHhhcc---ccCCCCEEECCCCCHHHHHHHH
Confidence 9999999999999999998776543222 1222221100 0001467889999988876654
No 64
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.05 E-value=3e-10 Score=109.70 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=75.6
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecC----CCCE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNE----YGGT 76 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE----~G~~ 76 (252)
+||++++.++++|||+.+||+..+..+......++.++|.+++.+|++++++.++++.|.+++ +++|||+ +|.+
T Consensus 419 lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~l 496 (527)
T 3pc3_A 419 LPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALNKRVIRLNESEILGKLARVLEVDP--SVLILGKNPAGKVEL 496 (527)
T ss_dssp EEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEETTCCEEETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEE
T ss_pred EEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhcCCCeEECCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeE
Confidence 599983457999999999999876543222356799999999999999999999999996544 5799998 5999
Q ss_pred EEEEcchhHHHHHHhhh
Q 041526 77 VGVVTLEDVVEEIVGEI 93 (252)
Q Consensus 77 vGIVTleDIleeIvGei 93 (252)
+||||..||++.+....
T Consensus 497 vGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 497 KALATKLDVTTFIAAGK 513 (527)
T ss_dssp EEEEEHHHHHHHHHTCC
T ss_pred EEEEEHHHHHHHHHhcc
Confidence 99999999999986544
No 65
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.04 E-value=3.3e-10 Score=96.62 Aligned_cols=86 Identities=22% Similarity=0.300 Sum_probs=74.8
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||++++ ++++|+|+.+|++.... ..++.++|.+++.++++++++.++++.|.+++.+.++|+|+.|.++|+|
T Consensus 47 ~pVvd~~-~~l~Givt~~dl~~~~~------~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGii 119 (213)
T 1vr9_A 47 CIVKDRE-GHFRGVVNKEDLLDLDL------DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAV 119 (213)
T ss_dssp EEEECTT-SBEEEEEEGGGGTTSCT------TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEE
T ss_pred EEEEcCC-CEEEEEEEHHHHHhhcC------CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEE
Confidence 5899753 78999999999986542 2458889988899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhh
Q 041526 81 TLEDVVEEIVGEI 93 (252)
Q Consensus 81 TleDIleeIvGei 93 (252)
|..|++..+....
T Consensus 120 t~~Dil~~~~~~~ 132 (213)
T 1vr9_A 120 SLHDFLEALIEAL 132 (213)
T ss_dssp EHHHHHHHHHHSC
T ss_pred EHHHHHHHHHHHh
Confidence 9999999876443
No 66
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.04 E-value=1.1e-09 Score=97.92 Aligned_cols=93 Identities=18% Similarity=0.332 Sum_probs=74.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCC--------cccccchh-------hhhcCCceecCCCCcHHHHHHHHHHcCCc
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGE--------LLESTKVA-------DMAHKPAYFVPDSMSVWNLLREFRIRKVH 65 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~--------~~~~~~l~-------~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~ 65 (252)
+||++++.++++|+|+.+|++..+.... ......+. ++|.+++.++++++++.++++.|++++.+
T Consensus 71 ~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~ 150 (330)
T 2v8q_E 71 APLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIH 150 (330)
T ss_dssp EEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred EEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCC
Confidence 5999987688999999999987543210 00011222 34678999999999999999999999999
Q ss_pred eEEEecC-CCCEEEEEcchhHHHHHHhhh
Q 041526 66 MAVVLNE-YGGTVGVVTLEDVVEEIVGEI 93 (252)
Q Consensus 66 ~AiVVDE-~G~~vGIVTleDIleeIvGei 93 (252)
.++|+|+ +|.++|+||..|+++.+.+..
T Consensus 151 ~~~Vvd~~~~~~~Givt~~dl~~~~~~~~ 179 (330)
T 2v8q_E 151 RLPVIDPESGNTLYILTHKRILKFLKLFI 179 (330)
T ss_dssp CEEEECTTTCCEEEEECHHHHHHHHHHHS
T ss_pred eEEEEeCCCCcEEEEEcHHHHHHHHHHHh
Confidence 9999998 899999999999999886543
No 67
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.00 E-value=1.3e-09 Score=97.52 Aligned_cols=92 Identities=12% Similarity=0.226 Sum_probs=73.1
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHc------CCc----ccccchhhh-------hcCCc--eecCCCCcHHHHHHHHHH
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQK------GEL----LESTKVADM-------AHKPA--YFVPDSMSVWNLLREFRI 61 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~------~~~----~~~~~l~~~-------~~r~~--~~Vpe~~~l~~lL~~mr~ 61 (252)
+|||+++.++++|+|+.+|++..+.. ... ....++..+ |.+++ .++++++++.++++.|++
T Consensus 58 ~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~ 137 (334)
T 2qrd_G 58 APLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSK 137 (334)
T ss_dssp EEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHH
T ss_pred EEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHH
Confidence 59999877899999999999875421 110 001223333 45777 999999999999999999
Q ss_pred cCCceEEEecCCCC-----EEEEEcchhHHHHHHhh
Q 041526 62 RKVHMAVVLNEYGG-----TVGVVTLEDVVEEIVGE 92 (252)
Q Consensus 62 ~~~~~AiVVDE~G~-----~vGIVTleDIleeIvGe 92 (252)
++.+.++|+|++|+ ++|+||..|+++.+.+.
T Consensus 138 ~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~ 173 (334)
T 2qrd_G 138 SRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMN 173 (334)
T ss_dssp SCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhh
Confidence 99999999999876 99999999999988754
No 68
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.00 E-value=3.7e-10 Score=98.21 Aligned_cols=116 Identities=16% Similarity=0.206 Sum_probs=83.8
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||+++ .++++|+++.+|++..+. ..++.++|.+++.++++++++.++++.|.+++.+.++|+|++|.++|+|
T Consensus 35 ~pV~d~-~~~~~Giv~~~dl~~~~~------~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Gii 107 (282)
T 2yzq_A 35 FPVVNK-EGKLVGIISVKRILVNPD------EEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGIL 107 (282)
T ss_dssp EEEECT-TCCEEEEEESSCC----------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE
T ss_pred EEEEcC-CCcEEEEEEHHHHHhhhc------cCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEE
Confidence 589985 479999999999986542 2457788877789999999999999999999999999999999999999
Q ss_pred cchhHHH-HHHhh-hccCCCcHHHHhhhcccEEEecCceEEEeCCcChHHhHhhc
Q 041526 81 TLEDVVE-EIVGE-IFDESDSKEEIQKKTGYIVMRAEGIYDVDANTSIDQLSEDL 133 (252)
Q Consensus 81 TleDIle-eIvGe-i~DE~d~~~~~~~~~~~i~~~~dg~~~v~G~~~L~dl~~~l 133 (252)
|..|++. .+.+. ...... -.+ +. ..+.+.+++.+++.++.+.+
T Consensus 108 t~~di~~~~~~~~~~~~~~~-v~~-------~m--~~~~~~v~~~~~l~~~~~~~ 152 (282)
T 2yzq_A 108 TVGDIIRRYFAKSEKYKGVE-IEP-------YY--QRYVSIVWEGTPLKAALKAL 152 (282)
T ss_dssp EHHHHHHHTTTTCSGGGGCB-STT-------TS--BSCCCCEETTSBHHHHHHHH
T ss_pred EHHHHHHHHHhccCCcccCc-HHH-------Hh--CCCCEEECCCCCHHHHHHHH
Confidence 9999998 66543 111110 011 11 23456788888888877665
No 69
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.99 E-value=1.4e-09 Score=97.24 Aligned_cols=90 Identities=18% Similarity=0.252 Sum_probs=75.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCc-ccccchhhhh------cCCceecCCCCcHHHHHHHHHHcCCceEEEecCC
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGEL-LESTKVADMA------HKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY 73 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~-~~~~~l~~~~------~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~ 73 (252)
+||+++ .++++|+|+.+|++..+..+.. ....++.++| .+++.++++++++.++++.|.+++.+.++|+|++
T Consensus 227 ~~Vvd~-~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~ 305 (330)
T 2v8q_E 227 LPVVDE-KGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEH 305 (330)
T ss_dssp EEEECT-TSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTT
T ss_pred EEEECC-CCcEEEEEEHHHHHHHHhccccccccCcHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCC
Confidence 589875 3789999999999987653311 1134678887 3789999999999999999999999999999999
Q ss_pred CCEEEEEcchhHHHHHHh
Q 041526 74 GGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 74 G~~vGIVTleDIleeIvG 91 (252)
|.++|+||..||+..+..
T Consensus 306 g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 306 DVVKGIVSLSDILQALVL 323 (330)
T ss_dssp SBEEEEEEHHHHHHHHHS
T ss_pred CcEEEEEeHHHHHHHHHh
Confidence 999999999999998754
No 70
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.96 E-value=2.4e-09 Score=92.39 Aligned_cols=57 Identities=12% Similarity=0.035 Sum_probs=48.0
Q ss_pred cchhhhhc-CCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHH
Q 041526 33 TKVADMAH-KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEI 89 (252)
Q Consensus 33 ~~l~~~~~-r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeI 89 (252)
.++.++|. +++.++++++++.++++.|++++.+..+|+|+.|.++|+||..|++...
T Consensus 185 ~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 185 LPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp SBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred CceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 35778897 8999999999999999999999999999999999999999999998753
No 71
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.95 E-value=1.6e-09 Score=103.53 Aligned_cols=85 Identities=15% Similarity=0.210 Sum_probs=74.4
Q ss_pred CeEEec-CCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcC-CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEE
Q 041526 1 VPVFEQ-RIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHK-PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVG 78 (252)
Q Consensus 1 lPV~~~-~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r-~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vG 78 (252)
+||+++ +.++++|+|+.+||+... . ...++.++|.+ ++.++++++++.++++.|++++.+.++|||++|.++|
T Consensus 124 ~pVvd~~~~~~lvGivt~~Dl~~~~--~---~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvG 198 (491)
T 1zfj_A 124 VPIVETLANRKLVGIITNRDMRFIS--D---YNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSG 198 (491)
T ss_dssp EEEESCTTTCBEEEEEEHHHHHHCS--C---SSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEE
T ss_pred EEEEEeCCCCEEEEEEEHHHHhhhc--c---CCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEE
Confidence 589872 358999999999998531 1 24568899976 8899999999999999999999999999999999999
Q ss_pred EEcchhHHHHHH
Q 041526 79 VVTLEDVVEEIV 90 (252)
Q Consensus 79 IVTleDIleeIv 90 (252)
+||.+||++.+.
T Consensus 199 ivt~~Dil~~~~ 210 (491)
T 1zfj_A 199 LITIKDIEKVIE 210 (491)
T ss_dssp EEEHHHHHHHHH
T ss_pred EEEHHHHHHHHh
Confidence 999999999986
No 72
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.92 E-value=1.1e-10 Score=112.59 Aligned_cols=89 Identities=15% Similarity=0.052 Sum_probs=0.9
Q ss_pred CeEEecC--CCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCC--ceecCCCCcHHHHHHHHHHcCCceEEEecCCCCE
Q 041526 1 VPVFEQR--IDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKP--AYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGT 76 (252)
Q Consensus 1 lPV~~~~--~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~--~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~ 76 (252)
+||++++ .++++|+|+.+||+.. ... ...++.++|.++ +.++++++++.++++.|++++.+.++|+|++|.+
T Consensus 131 ~pVvd~~~~~g~lvGiVt~~Dl~~~-~~~---~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~l 206 (503)
T 1me8_A 131 VAVTDDGTPHGVLLGLVTQRDYPID-LTQ---TETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHL 206 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEECCCcCCeEEEEEEHHHHHhh-hcc---ccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeE
Confidence 6899864 3799999999999853 111 245688999665 8999999999999999999999999999999999
Q ss_pred EEEEcchhHHHHHHhhh
Q 041526 77 VGVVTLEDVVEEIVGEI 93 (252)
Q Consensus 77 vGIVTleDIleeIvGei 93 (252)
+||||.+||++.+....
T Consensus 207 vGiIT~~Dil~~~~~~~ 223 (503)
T 1me8_A 207 RYIVFRKDYDRSQVCHN 223 (503)
T ss_dssp ---------------CC
T ss_pred EEEEEecHHHHhhhccc
Confidence 99999999999987544
No 73
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.91 E-value=1.9e-10 Score=113.63 Aligned_cols=88 Identities=22% Similarity=0.186 Sum_probs=71.0
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCc-----------------------------------------------cccc
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGEL-----------------------------------------------LEST 33 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~-----------------------------------------------~~~~ 33 (252)
+||+++ .++++|+|+.+||+..+..... ....
T Consensus 490 ~PVvd~-~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 568 (632)
T 3org_A 490 FPVIDA-NGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTS 568 (632)
T ss_dssp ECBBCT-TCBBCCEESHHHHTTTTTTC-----------------------------------------------------
T ss_pred EEEEec-CCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeecccc
Confidence 599986 4789999999999976533200 0001
Q ss_pred chhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHH
Q 041526 34 KVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIV 90 (252)
Q Consensus 34 ~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIv 90 (252)
++.++|.+++.+|++++++.++++.|++++.+.++|+ |+|+++||||.+||+.++.
T Consensus 569 ~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 569 SLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGYS 624 (632)
T ss_dssp --CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECCC
T ss_pred ccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHHh
Confidence 2667899999999999999999999999999999999 7899999999999987653
No 74
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.90 E-value=3e-09 Score=92.39 Aligned_cols=86 Identities=20% Similarity=0.300 Sum_probs=72.9
Q ss_pred CeEEecCCCCEEEEEEHHHHhH-HHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLD-YVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGV 79 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~-~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGI 79 (252)
+||++++ ++++|+++.+|++. .+..+......++.++|.++++++++++++.++++.|.+++.+.++|+|++|.++|+
T Consensus 94 ~~Vvd~~-~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Gi 172 (282)
T 2yzq_A 94 VVVVDSK-GKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGI 172 (282)
T ss_dssp EEEECTT-SCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEE
T ss_pred EEEEcCC-CEEEEEEEHHHHHHHHHhccCCcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEE
Confidence 5898764 78999999999998 655332122356788898889999999999999999999999999999999999999
Q ss_pred EcchhHHH
Q 041526 80 VTLEDVVE 87 (252)
Q Consensus 80 VTleDIle 87 (252)
||..|++.
T Consensus 173 it~~dl~~ 180 (282)
T 2yzq_A 173 VDETDLLR 180 (282)
T ss_dssp EEGGGGGG
T ss_pred EEHHHHhh
Confidence 99999983
No 75
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.85 E-value=6.4e-10 Score=107.18 Aligned_cols=83 Identities=19% Similarity=0.213 Sum_probs=60.8
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhc-C-CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAH-K-PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVG 78 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~-r-~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vG 78 (252)
+||++++ ++++|+|+.+||+.. .. ...++.++|+ + +++++++++++.++++.|++++.+.++|||++|.++|
T Consensus 123 ~PVvd~~-~~lvGiVt~rDL~~~--~~---~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~G 196 (496)
T 4fxs_A 123 FPVVTEN-NELVGIITGRDVRFV--TD---LTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKG 196 (496)
T ss_dssp EEEECSS-SBEEEEEEHHHHTTC--CC---TTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCE
T ss_pred EEEEccC-CEEEEEEEHHHHhhc--cc---CCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEE
Confidence 6999864 899999999999732 11 2456889995 3 6899999999999999999999999999999999999
Q ss_pred EEcchhHHHHH
Q 041526 79 VVTLEDVVEEI 89 (252)
Q Consensus 79 IVTleDIleeI 89 (252)
+||.+||++..
T Consensus 197 iIT~~DIl~~~ 207 (496)
T 4fxs_A 197 MITAKDFHKAE 207 (496)
T ss_dssp EECCC-----C
T ss_pred eehHhHHHHhh
Confidence 99999999864
No 76
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.85 E-value=3e-10 Score=108.95 Aligned_cols=101 Identities=28% Similarity=0.388 Sum_probs=10.3
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVV 80 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIV 80 (252)
+||+++ ++++|+|+.+||+. . ...++.++|.+++.++++++++.++++.|++++.+.++|+|++|.++|+|
T Consensus 127 ~pVvd~--~~lvGivt~~Dl~~---~----~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGii 197 (486)
T 2cu0_A 127 LPVVED--EKVVGIITKKDIAA---R----EGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLI 197 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEC--CEEEEEEEHHHhcc---C----CCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEE
Confidence 689976 89999999999975 1 13568889977899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhccCCCcHHHHhhhcccEEEecCceEEEeCCcCh
Q 041526 81 TLEDVVEEIVGEIFDESDSKEEIQKKTGYIVMRAEGIYDVDANTSI 126 (252)
Q Consensus 81 TleDIleeIvGei~DE~d~~~~~~~~~~~i~~~~dg~~~v~G~~~L 126 (252)
|.+||++++. ++. ..+...|.|.+.|.+++
T Consensus 198 T~~Dil~~~~------~~~----------~~~~~~g~~~v~~~~~~ 227 (486)
T 2cu0_A 198 TMSDLVARKK------YKN----------AVRDENGELLVAAAVSP 227 (486)
T ss_dssp ---------C------CTT----------CCBCTTSCBCCEEEECT
T ss_pred EHHHHHHhhh------ccc----------cccccCCceeecceech
Confidence 9999999852 110 01124567777777766
No 77
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.72 E-value=1.4e-09 Score=104.67 Aligned_cols=82 Identities=21% Similarity=0.236 Sum_probs=0.0
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhc-C-CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAH-K-PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVG 78 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~-r-~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vG 78 (252)
+||++ .++++|+|+.+||.... . ...++.++|. + ++.++++++++.++++.|++++.+.++|||++|.++|
T Consensus 122 ~pVvd--~g~lvGIVt~rDl~~~~--~---~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvG 194 (490)
T 4avf_A 122 FPVVE--QGELVGIVTGRDLRVKP--N---AGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRG 194 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEE--CCEEEEEEEhHHhhhcc--c---cCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEE
Confidence 68998 47999999999996322 1 2356889996 3 6899999999999999999999999999999999999
Q ss_pred EEcchhHHHHH
Q 041526 79 VVTLEDVVEEI 89 (252)
Q Consensus 79 IVTleDIleeI 89 (252)
+||..||++.+
T Consensus 195 iIT~~Dil~~~ 205 (490)
T 4avf_A 195 LVTFRDIEKAK 205 (490)
T ss_dssp -----------
T ss_pred EEehHHhhhhc
Confidence 99999999975
No 78
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.70 E-value=4.1e-08 Score=86.66 Aligned_cols=54 Identities=22% Similarity=0.314 Sum_probs=49.1
Q ss_pred hhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHhh
Q 041526 38 MAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVGE 92 (252)
Q Consensus 38 ~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvGe 92 (252)
+|...|++|.++++|..+...|+..+.+.++|++ .|.++||||..||+.+|.|-
T Consensus 194 ~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~~ 247 (250)
T 2d4z_A 194 RIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEGS 247 (250)
T ss_dssp CEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred cccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 4677888999999999999999999999999997 59999999999999998753
No 79
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.47 E-value=2e-08 Score=96.12 Aligned_cols=87 Identities=17% Similarity=0.265 Sum_probs=7.0
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCcccccchhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEE
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGELLESTKVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVG 78 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vG 78 (252)
+||++++ ++++|+|+.+||+... . ...++.++|.+ ++.++++++++.++++.|.+++.+..+|||+.|.++|
T Consensus 129 ~pVvd~~-~~lvGivt~~Dl~~~~--~---~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvG 202 (494)
T 1vrd_A 129 LPVVDEE-GRLVGLLTNRDVRFEK--N---LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVG 202 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEcCC-CEEEEEEEHHHHHhhc--C---CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEE
Confidence 5888753 6899999999998531 1 23568899976 8999999999999999999999999999999999999
Q ss_pred EEcchhHHHHHHhhh
Q 041526 79 VVTLEDVVEEIVGEI 93 (252)
Q Consensus 79 IVTleDIleeIvGei 93 (252)
+||..|+++.+....
T Consensus 203 iIt~~Dll~~~~~~~ 217 (494)
T 1vrd_A 203 LITIKDIMSVIEHPN 217 (494)
T ss_dssp ------CHHHHTCTT
T ss_pred EEEHHHHHhhhcccc
Confidence 999999999987653
No 80
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.41 E-value=2.3e-07 Score=75.46 Aligned_cols=58 Identities=17% Similarity=0.296 Sum_probs=54.0
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHH
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIV 90 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIv 90 (252)
.+++++|.+++.+|++++++.++++.|.+++.+.++|+|+.|.++|+||..|++..+.
T Consensus 18 ~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~ 75 (170)
T 4esy_A 18 VPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSI 75 (170)
T ss_dssp SBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTC
T ss_pred CCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHh
Confidence 4688999999999999999999999999999999999999999999999999987643
No 81
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.36 E-value=6.8e-07 Score=67.83 Aligned_cols=58 Identities=19% Similarity=0.320 Sum_probs=53.6
Q ss_pred chhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 34 KVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 34 ~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
+++++|.+++.++++++++.++++.|++++.+.++|+|+.|.++|+||..|++..+..
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~ 59 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ 59 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 4678898889999999999999999999999999999999999999999999988754
No 82
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.34 E-value=1.8e-06 Score=68.33 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=53.6
Q ss_pred chhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 34 KVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 34 ~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
++.++|.+ ++.++++++++.++++.|.+++...++|+|+.|.++|+||..|++..+..
T Consensus 29 ~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 88 (149)
T 3k2v_A 29 RVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDT 88 (149)
T ss_dssp BGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCS
T ss_pred CHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhc
Confidence 68889977 79999999999999999999999999999999999999999999987753
No 83
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.31 E-value=9.1e-07 Score=61.25 Aligned_cols=49 Identities=27% Similarity=0.329 Sum_probs=45.3
Q ss_pred CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 42 PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 42 ~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
++.++++++++.++++.|++++.+.++|+|+ |.++|+||..|++..+..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 4678999999999999999999999999998 999999999999998754
No 84
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.31 E-value=2.9e-06 Score=65.78 Aligned_cols=57 Identities=26% Similarity=0.240 Sum_probs=52.2
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHH
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEI 89 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeI 89 (252)
.+++++|.+++.++++++++.++++.|.+++.+.++|+|+.|.++|+||..|++..+
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 63 (138)
T 2yzi_A 7 APIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRV 63 (138)
T ss_dssp SBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHT
T ss_pred hhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHH
Confidence 457888988999999999999999999999999999999889999999999998544
No 85
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.29 E-value=2.9e-06 Score=64.41 Aligned_cols=56 Identities=29% Similarity=0.306 Sum_probs=51.0
Q ss_pred hhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 35 VADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 35 l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
++++|.+++.++++++++.++++.|++++.+.++|+| .|.++|+||..|++..+..
T Consensus 3 v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~ 58 (125)
T 1pbj_A 3 VEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAE 58 (125)
T ss_dssp HHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred HHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhc
Confidence 5678888899999999999999999999999999999 7999999999999977643
No 86
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.28 E-value=4.1e-06 Score=67.26 Aligned_cols=59 Identities=12% Similarity=0.170 Sum_probs=54.2
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
.++.++|.+++.++++++++.++++.|++++...++|+|+.|.++|+||..|++..+..
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~ 63 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQES 63 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHH
Confidence 45788998889999999999999999999999999999988999999999999988764
No 87
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.27 E-value=1.5e-06 Score=69.66 Aligned_cols=58 Identities=19% Similarity=0.348 Sum_probs=52.5
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
.++.++|.+ ++++++++++.++++.|.+++...++|+|+.|.++|+||..|++..+++
T Consensus 17 ~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 74 (159)
T 3fv6_A 17 LQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIG 74 (159)
T ss_dssp CBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTS
T ss_pred CCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhc
Confidence 468889965 5699999999999999999999999999999999999999999998754
No 88
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.25 E-value=2.9e-06 Score=65.64 Aligned_cols=58 Identities=21% Similarity=0.237 Sum_probs=52.8
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhH-HHHHH
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDV-VEEIV 90 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDI-leeIv 90 (252)
.++.++|.+++.++++++++.++++.|++++.+.++|+|+.|.++|+||..|+ +..+.
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTT
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 45788898889999999999999999999999999999988999999999999 87654
No 89
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.20 E-value=3.1e-08 Score=95.39 Aligned_cols=87 Identities=15% Similarity=0.208 Sum_probs=56.0
Q ss_pred CeEEecC--CCCEEEEEEHHHHhHHHHcCCcccccchhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCE
Q 041526 1 VPVFEQR--IDNIVGIAYAMDLLDYVQKGELLESTKVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGT 76 (252)
Q Consensus 1 lPV~~~~--~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~ 76 (252)
+||++++ .++++|+|+.+|+....... ...++.++|.+ ++.++++++++.++++.|.+++.+..+|||+.|.+
T Consensus 142 ~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~---~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~l 218 (514)
T 1jcn_A 142 IPITETGTMGSKLVGIVTSRDIDFLAEKD---HTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDEL 218 (514)
T ss_dssp EESCC--------CCEECTTTTC-------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCC
T ss_pred EEEEeCCCcCCEEEEEEEHHHHHhhhhcc---CCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeE
Confidence 4788653 37899999999987532111 23568889977 89999999999999999999999999999999999
Q ss_pred EEEEcchhHHHHHH
Q 041526 77 VGVVTLEDVVEEIV 90 (252)
Q Consensus 77 vGIVTleDIleeIv 90 (252)
+|+||..||+..+.
T Consensus 219 vGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 219 VAIIARTDLKKNRD 232 (514)
T ss_dssp C----CCCCSSCCC
T ss_pred EEEEEHHHHHHHhh
Confidence 99999999987653
No 90
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.19 E-value=2.8e-06 Score=72.92 Aligned_cols=61 Identities=11% Similarity=0.122 Sum_probs=56.2
Q ss_pred ccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHhh
Q 041526 32 STKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVGE 92 (252)
Q Consensus 32 ~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvGe 92 (252)
..+++++|.+++.++++++++.++++.|++++.+.++|+|+.|.++|+||..|++..+...
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~ 66 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDI 66 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCC
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 3568899999999999999999999999999999999999999999999999999988643
No 91
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.17 E-value=3e-06 Score=65.27 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=50.8
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHH
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVE 87 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIle 87 (252)
.++.++|.+++.++++++++.++++.|++++.+.++|+|+.|.++|+||..|++.
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 8 TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVI 62 (133)
T ss_dssp CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHH
T ss_pred cCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHH
Confidence 3578899888999999999999999999999999999998899999999999985
No 92
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.15 E-value=3.3e-06 Score=66.56 Aligned_cols=58 Identities=14% Similarity=0.067 Sum_probs=53.1
Q ss_pred cchhhhhc--CCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHH
Q 041526 33 TKVADMAH--KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIV 90 (252)
Q Consensus 33 ~~l~~~~~--r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIv 90 (252)
.+++++|. +++.++++++++.++++.|.+++.+.++|+|+.|.++|+||..|++..+.
T Consensus 15 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 74 (150)
T 3lqn_A 15 IFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGIL 74 (150)
T ss_dssp CBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTB
T ss_pred CChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 45888996 45899999999999999999999999999999999999999999999875
No 93
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.15 E-value=1.8e-06 Score=66.53 Aligned_cols=58 Identities=19% Similarity=0.115 Sum_probs=53.3
Q ss_pred ccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHH
Q 041526 32 STKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIV 90 (252)
Q Consensus 32 ~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIv 90 (252)
+.+++++|.+++.++++++++.++++.|++++.+.++|+|+ |.++|+||..|++..+.
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~ 61 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRK 61 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCS
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHh
Confidence 45688999999999999999999999999999999999999 99999999999987653
No 94
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.15 E-value=8.3e-06 Score=63.64 Aligned_cols=59 Identities=17% Similarity=0.384 Sum_probs=53.6
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCC--CEEEEEcchhHHHHHHh
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYG--GTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G--~~vGIVTleDIleeIvG 91 (252)
.++.++|.+++.++++++++.++++.|++++.+.++|+|+.| .++|+||..|++..+..
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~ 65 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQ 65 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHT
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhc
Confidence 357788988899999999999999999999999999999888 99999999999987754
No 95
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.14 E-value=6.1e-06 Score=63.52 Aligned_cols=59 Identities=15% Similarity=0.241 Sum_probs=53.0
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHhh
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVGE 92 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvGe 92 (252)
.+++++|.+++.++++++++.++++.|++++.+.++|+| .|.++|+||..|++..+...
T Consensus 4 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~ 62 (133)
T 2ef7_A 4 EIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKG 62 (133)
T ss_dssp CBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred ccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcC
Confidence 457888988889999999999999999999999999999 79999999999999877543
No 96
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.13 E-value=2.7e-06 Score=67.58 Aligned_cols=59 Identities=12% Similarity=0.048 Sum_probs=52.8
Q ss_pred cchhhhhc--CCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 33 TKVADMAH--KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 33 ~~l~~~~~--r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
.+++++|. +++.++++++++.++++.|.+++.+.++|+|+.|.++|+||..|++..+..
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHH
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHh
Confidence 34778887 678999999999999999999999999999999999999999999998864
No 97
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.11 E-value=4.7e-06 Score=65.71 Aligned_cols=89 Identities=20% Similarity=0.242 Sum_probs=68.6
Q ss_pred ccchhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEecCC-CCEEEEEcchhHHHHHHhhhccCCCcHHHHhhhcc
Q 041526 32 STKVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY-GGTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTG 108 (252)
Q Consensus 32 ~~~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~-G~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~ 108 (252)
..+++++|.+ ++.++++++++.++++.|++++.+..+|+|+. |.++|+||..|++..+...- .. .-.+
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~--~~-~v~~------ 92 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN--KI-ELEE------ 92 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS--CC-CGGG------
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC--Cc-cHHH------
Confidence 4568899976 78999999999999999999999999999988 89999999999998875432 11 1111
Q ss_pred cEEEecCceEEEeCCcChHHhHhhc
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDL 133 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~l 133 (252)
+. ..-..+...+++.++.+.+
T Consensus 93 -~m---~~~~~v~~~~~l~~~~~~m 113 (148)
T 3lv9_A 93 -IL---RDIIYISENLTIDKALERI 113 (148)
T ss_dssp -TC---BCCEEEETTSBHHHHHHHH
T ss_pred -hc---CCCeEECCCCCHHHHHHHH
Confidence 11 1235688888888876544
No 98
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.09 E-value=6.4e-06 Score=64.33 Aligned_cols=90 Identities=14% Similarity=0.137 Sum_probs=66.0
Q ss_pred cchhhhhc--CCceecCCCCcHHHHHHHHHHcCCceEEEecCC-CCEEEEEcchhHHHHHHhhhccCCCcHHHHhhhccc
Q 041526 33 TKVADMAH--KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY-GGTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTGY 109 (252)
Q Consensus 33 ~~l~~~~~--r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~-G~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~~ 109 (252)
.+++++|. +++.++++++++.++++.|++++.+..+|+|+. |.++|+||..|++..+...-..... -.+
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~-v~~------- 74 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDD-VKK------- 74 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCC-GGG-------
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcC-HHH-------
Confidence 35778886 567899999999999999999999999999987 8999999999999876521111111 111
Q ss_pred EEEecCceEEEeCCcChHHhHhhc
Q 041526 110 IVMRAEGIYDVDANTSIDQLSEDL 133 (252)
Q Consensus 110 i~~~~dg~~~v~G~~~L~dl~~~l 133 (252)
+.. . -+.+...+++.++.+.+
T Consensus 75 ~m~--~-~~~v~~~~~l~~~~~~m 95 (136)
T 3lfr_A 75 LLR--P-ATFVPESKRLNVLLREF 95 (136)
T ss_dssp TCB--C-CCEEETTCBHHHHHHHH
T ss_pred HcC--C-CeEECCCCcHHHHHHHH
Confidence 111 1 45688888888876543
No 99
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.06 E-value=5.3e-07 Score=87.39 Aligned_cols=83 Identities=16% Similarity=0.178 Sum_probs=0.0
Q ss_pred CeEEecC--CCCEEEEEEHHHHhHHHHcCCcccccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEE
Q 041526 1 VPVFEQR--IDNIVGIAYAMDLLDYVQKGELLESTKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVG 78 (252)
Q Consensus 1 lPV~~~~--~d~IvGiv~~kDll~~~~~~~~~~~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vG 78 (252)
+||.++. .++++|||+.||+... . ...++.++|+++++++++.+++.++.+.|++++...++|||+.|.++|
T Consensus 172 vpVvd~g~~~~kLvGIvT~RD~rf~---d---~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvG 245 (556)
T 4af0_A 172 VPITETGEPDSKLLGIVTGRDVQFQ---D---AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVS 245 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccCcCCEEEEEEeccccccc---c---cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEE
Confidence 5888752 4689999999998532 1 245789999999999999999999999999999999999999999999
Q ss_pred EEcchhHHHHH
Q 041526 79 VVTLEDVVEEI 89 (252)
Q Consensus 79 IVTleDIleeI 89 (252)
+||..|++...
T Consensus 246 lIT~kDi~k~~ 256 (556)
T 4af0_A 246 LVARSDLLKNQ 256 (556)
T ss_dssp -----------
T ss_pred EEEechhhhhh
Confidence 99999998653
No 100
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.05 E-value=6.6e-06 Score=58.58 Aligned_cols=49 Identities=27% Similarity=0.342 Sum_probs=44.3
Q ss_pred ceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHhh
Q 041526 43 AYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVGE 92 (252)
Q Consensus 43 ~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvGe 92 (252)
+++|.+++++.++++.|.+++...++|+|+ |.++||||-.|++..++..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~-~~lvGIvT~~Di~~~~~~~ 50 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAK 50 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 578999999999999999999999999975 9999999999999877543
No 101
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.05 E-value=8.9e-06 Score=65.48 Aligned_cols=61 Identities=23% Similarity=0.329 Sum_probs=54.6
Q ss_pred ccchhhhhcC---CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHhh
Q 041526 32 STKVADMAHK---PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVGE 92 (252)
Q Consensus 32 ~~~l~~~~~r---~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvGe 92 (252)
..+++++|.+ ++.++++++++.++++.|.+++.+.++|+|+.|.++|+||..|++..+...
T Consensus 23 ~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 86 (165)
T 3fhm_A 23 ATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQ 86 (165)
T ss_dssp SCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred hcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhc
Confidence 4568899963 689999999999999999999999999999999999999999999987643
No 102
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.05 E-value=1e-05 Score=62.67 Aligned_cols=58 Identities=17% Similarity=0.245 Sum_probs=52.1
Q ss_pred chhh---hhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 34 KVAD---MAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 34 ~l~~---~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
++.+ +|.+++.++++++++.++++.|.+++.+.++|+|+.|.++|+||..|++..+..
T Consensus 9 ~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 69 (144)
T 2nyc_A 9 PIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKG 69 (144)
T ss_dssp BGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred chhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcc
Confidence 4555 677889999999999999999999999999999988999999999999987754
No 103
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.02 E-value=6.6e-06 Score=65.63 Aligned_cols=59 Identities=12% Similarity=0.054 Sum_probs=53.7
Q ss_pred ccchhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHH
Q 041526 32 STKVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIV 90 (252)
Q Consensus 32 ~~~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIv 90 (252)
..++.++|.+ ++.++++++++.++++.|++++...++|+|+.|.++|+||..|++..+.
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 73 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIF 73 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHB
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhh
Confidence 3568889976 7899999999999999999999999999999999999999999998774
No 104
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.02 E-value=4.5e-06 Score=64.26 Aligned_cols=89 Identities=11% Similarity=0.115 Sum_probs=65.1
Q ss_pred cchhhhhcCC--ceecCCCCcHHHHHHHHHHcCCceEEEecCC-CCEEEEEcchhHHHHHHhhhccCCCcHHHHhhhccc
Q 041526 33 TKVADMAHKP--AYFVPDSMSVWNLLREFRIRKVHMAVVLNEY-GGTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTGY 109 (252)
Q Consensus 33 ~~l~~~~~r~--~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~-G~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~~ 109 (252)
.+++++|.++ +.++++++++.++++.|++++....+|+|+. |.++|+||..|++..+...-. .. .-.++
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~-~~-~v~~~------ 74 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAE-AF-SMDKV------ 74 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCC-CC-CHHHH------
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCC-CC-CHHHH------
Confidence 3577888743 8899999999999999999999999999988 899999999999987643211 11 11121
Q ss_pred EEEecCceEEEeCCcChHHhHhhc
Q 041526 110 IVMRAEGIYDVDANTSIDQLSEDL 133 (252)
Q Consensus 110 i~~~~dg~~~v~G~~~L~dl~~~l 133 (252)
.. . -+.+...+++.++.+.+
T Consensus 75 -m~-~--~~~v~~~~~l~~a~~~m 94 (127)
T 3nqr_A 75 -LR-T--AVVVPESKRVDRMLKEF 94 (127)
T ss_dssp -CB-C--CCEEETTCBHHHHHHHH
T ss_pred -cC-C--CeEECCCCcHHHHHHHH
Confidence 11 1 24577888887765543
No 105
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.00 E-value=6.7e-06 Score=65.09 Aligned_cols=58 Identities=12% Similarity=0.056 Sum_probs=52.5
Q ss_pred cchhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHH
Q 041526 33 TKVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIV 90 (252)
Q Consensus 33 ~~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIv 90 (252)
.++.++|.+ ++.++++++++.++++.|.+++.+.++|+|+.|.++|+||..|++..+.
T Consensus 11 ~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 70 (157)
T 2emq_A 11 MTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAIL 70 (157)
T ss_dssp CBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSB
T ss_pred CcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 457788865 7899999999999999999999999999998899999999999998764
No 106
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.00 E-value=9.2e-06 Score=66.66 Aligned_cols=58 Identities=14% Similarity=0.265 Sum_probs=53.6
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHH
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIV 90 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIv 90 (252)
.++.++|.+++.++++++++.++++.|.+++.+.++|+|+.|.++|+||..||+..+.
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTG
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Confidence 4578899889999999999999999999999999999998899999999999998765
No 107
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.99 E-value=9.6e-06 Score=64.38 Aligned_cols=59 Identities=10% Similarity=0.144 Sum_probs=53.8
Q ss_pred ccchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecC--CCCEEEEEcchhHHHHHH
Q 041526 32 STKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNE--YGGTVGVVTLEDVVEEIV 90 (252)
Q Consensus 32 ~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE--~G~~vGIVTleDIleeIv 90 (252)
..+++++|.+++.++++++++.++++.|.+++.+.++|+|+ .|.++|+||..|++..+.
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHH
Confidence 35688999888999999999999999999999999999996 799999999999998764
No 108
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.99 E-value=6.3e-06 Score=63.71 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=65.8
Q ss_pred cchhhhhc--CCceecCCCCcHHHHHHHHHHcCCceEEEecCC-CCEEEEEcchhHHHHHHhhhccCCCcHHHHhhhccc
Q 041526 33 TKVADMAH--KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY-GGTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTGY 109 (252)
Q Consensus 33 ~~l~~~~~--r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~-G~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~~ 109 (252)
.+++++|. +++.++++++++.++++.|++++....+|+|+. |.++|+||..|++..+.. ... .-.+
T Consensus 5 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~---~~~-~v~~------- 73 (129)
T 3jtf_A 5 RTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE---PAL-DIRS------- 73 (129)
T ss_dssp CBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC---TTS-CGGG-------
T ss_pred CCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc---CCc-CHHH-------
Confidence 46888896 567899999999999999999999999999985 999999999999887532 111 1111
Q ss_pred EEEecCceEEEeCCcChHHhHhhc
Q 041526 110 IVMRAEGIYDVDANTSIDQLSEDL 133 (252)
Q Consensus 110 i~~~~dg~~~v~G~~~L~dl~~~l 133 (252)
+.. .-+.+...+++.++.+.+
T Consensus 74 ~m~---~~~~v~~~~~l~~~~~~m 94 (129)
T 3jtf_A 74 LVR---PAVFIPEVKRLNVLLREF 94 (129)
T ss_dssp GCB---CCCEEETTCBHHHHHHHH
T ss_pred HhC---CCeEeCCCCcHHHHHHHH
Confidence 111 135688888888876554
No 109
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.96 E-value=1.4e-05 Score=61.80 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=50.8
Q ss_pred chhhhhc---CCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHH
Q 041526 34 KVADMAH---KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIV 90 (252)
Q Consensus 34 ~l~~~~~---r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIv 90 (252)
+++++|. +++.++++++++.++++.|++++.+.++|+| .|.++|+||..|++..+.
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~ 65 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSY 65 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGG
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHH
Confidence 5778887 7889999999999999999999999999998 799999999999997554
No 110
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.96 E-value=9.7e-06 Score=63.29 Aligned_cols=56 Identities=20% Similarity=0.135 Sum_probs=50.8
Q ss_pred cchhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHH
Q 041526 33 TKVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEE 88 (252)
Q Consensus 33 ~~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIlee 88 (252)
.+++++|.+ ++.++++++++.++++.|++++.+.++|+|+.|.++|+||..|++..
T Consensus 5 ~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~ 62 (152)
T 4gqw_A 5 YTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLAL 62 (152)
T ss_dssp SBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTC
T ss_pred EEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHh
Confidence 457788866 68999999999999999999999999999999999999999999854
No 111
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.95 E-value=9.2e-06 Score=65.49 Aligned_cols=54 Identities=28% Similarity=0.213 Sum_probs=49.8
Q ss_pred chhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHH
Q 041526 34 KVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVE 87 (252)
Q Consensus 34 ~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIle 87 (252)
+++++|.+ ++.++++++++.++++.|++++.+.++|+|+.|.++|+||..|++.
T Consensus 5 ~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~ 60 (180)
T 3sl7_A 5 TVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLA 60 (180)
T ss_dssp BHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTC
T ss_pred eHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHh
Confidence 57788866 6899999999999999999999999999999999999999999985
No 112
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.89 E-value=2.4e-05 Score=63.43 Aligned_cols=60 Identities=23% Similarity=0.155 Sum_probs=53.3
Q ss_pred ccchhhhhcCC----ceec--CCCCcHHHHHHHHHHcCCceEEEe--cCCCCEEEEEcchhHHHHHHh
Q 041526 32 STKVADMAHKP----AYFV--PDSMSVWNLLREFRIRKVHMAVVL--NEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 32 ~~~l~~~~~r~----~~~V--pe~~~l~~lL~~mr~~~~~~AiVV--DE~G~~vGIVTleDIleeIvG 91 (252)
..+++++|.+. +.++ ++++++.++++.|.+++.+.++|+ |+.|.++|+||..|++..+..
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~ 77 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIEN 77 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHH
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 35688899665 6888 999999999999999999999999 789999999999999998764
No 113
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.89 E-value=9.1e-06 Score=62.74 Aligned_cols=89 Identities=13% Similarity=0.163 Sum_probs=65.0
Q ss_pred cchhhhhc--CCceecCCCCcHHHHHHHHHHcCCceEEEecCC-CCEEEEEcchhHHHHHHhhhccCCCcHHHHhhhccc
Q 041526 33 TKVADMAH--KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY-GGTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTGY 109 (252)
Q Consensus 33 ~~l~~~~~--r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~-G~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~~ 109 (252)
.+++++|. .++.++++++++.++++.|++++.+..+|+|+. |.++|+||..|++..+...-. .. .-.++
T Consensus 6 ~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~-~~-~v~~~------ 77 (130)
T 3i8n_A 6 VPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSG-QK-QLGAV------ 77 (130)
T ss_dssp -CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTT-TS-BHHHH------
T ss_pred CCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCC-cC-CHHHH------
Confidence 45778886 334589999999999999999999999999987 999999999999998754321 11 11221
Q ss_pred EEEecCceEEEeCCcChHHhHhhc
Q 041526 110 IVMRAEGIYDVDANTSIDQLSEDL 133 (252)
Q Consensus 110 i~~~~dg~~~v~G~~~L~dl~~~l 133 (252)
+ . .-+.+...+++.++.+.+
T Consensus 78 m-~---~~~~v~~~~~l~~~~~~m 97 (130)
T 3i8n_A 78 M-R---PIQVVLNNTALPKVFDQM 97 (130)
T ss_dssp S-E---ECCEEETTSCHHHHHHHH
T ss_pred h-c---CCcCcCCCCcHHHHHHHH
Confidence 1 1 134688888888876544
No 114
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=97.88 E-value=1.4e-05 Score=65.05 Aligned_cols=116 Identities=12% Similarity=0.086 Sum_probs=81.8
Q ss_pred ccchhhhhc--CCceecCCCCcHHHHHHHHHHcCCceEEEecCC-CCEEEEEcchhHHHHHHhhhccCCCcHHHHhhhcc
Q 041526 32 STKVADMAH--KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY-GGTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTG 108 (252)
Q Consensus 32 ~~~l~~~~~--r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~-G~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~ 108 (252)
..+++++|. +++.++++++++.++++.|++++...++|+|+. |.++|+||..|++..+...- .. .-.+
T Consensus 41 ~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~--~~-~v~~------ 111 (172)
T 3lhh_A 41 ERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE--RL-ELVD------ 111 (172)
T ss_dssp --CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC--CC-CGGG------
T ss_pred CCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC--cc-cHHH------
Confidence 346788997 678899999999999999999999999999988 99999999999999875321 11 1111
Q ss_pred cEEEecCceEEEeCCcChHHhHhhc---CCC-CC--CC-C---ccCCHHHHHHHHhCCCCCC
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDL---NIK-MP--EG-H---QYETVSGFVCEAFGYIPRT 160 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~l---gi~-l~--~~-~---~~~TLaGlil~~lg~iP~~ 160 (252)
+. ..-+.+...+++.++.+.+ ++. +| ++ + ...|...++-..++.+...
T Consensus 112 -im---~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~~de 169 (172)
T 3lhh_A 112 -LV---KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFFQE 169 (172)
T ss_dssp -GC---BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTCC--
T ss_pred -Hh---cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCCccc
Confidence 11 2335788889988876544 333 22 21 1 2367888887777776543
No 115
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.86 E-value=3.5e-05 Score=74.22 Aligned_cols=93 Identities=18% Similarity=0.269 Sum_probs=68.9
Q ss_pred ccchhhhhcCCceecCCC-CcHHHHHHHHHHcCCceEEEec-CCCCEEEEEcchhHHHHHHhhhccCCCcHHHHhhhccc
Q 041526 32 STKVADMAHKPAYFVPDS-MSVWNLLREFRIRKVHMAVVLN-EYGGTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTGY 109 (252)
Q Consensus 32 ~~~l~~~~~r~~~~Vpe~-~~l~~lL~~mr~~~~~~AiVVD-E~G~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~~ 109 (252)
..++.++|.+++.+++++ +++.++++.|++++....+|+| +.|.++|+||..||+..+...-......-.+
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~------- 455 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIK------- 455 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGG-------
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHH-------
Confidence 456899999999999999 9999999999999999999999 7899999999999999887532211111111
Q ss_pred EEEecCceEEEeCCcChHHhHhhc
Q 041526 110 IVMRAEGIYDVDANTSIDQLSEDL 133 (252)
Q Consensus 110 i~~~~dg~~~v~G~~~L~dl~~~l 133 (252)
+.. ..-..++..+++.++.+.+
T Consensus 456 im~--~~~~~v~~~~~l~~a~~~m 477 (527)
T 3pc3_A 456 ALN--KRVIRLNESEILGKLARVL 477 (527)
T ss_dssp GEE--TTCCEEETTSBHHHHHHHH
T ss_pred Hhc--CCCeEECCCCcHHHHHHHH
Confidence 111 1234566667777666554
No 116
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.86 E-value=2.2e-05 Score=62.50 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=53.3
Q ss_pred ccchhhhhcCCceecCCCCcHHHHHHHHHHcCCce-EEEecCCCCEEEEEcchhHHHHHHh
Q 041526 32 STKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHM-AVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 32 ~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~-AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
..+++++|.+++.++++++++.++++.|.+++.+. ++|+|+. .++|+||..|++..+..
T Consensus 15 ~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~ 74 (157)
T 1o50_A 15 VKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGF 74 (157)
T ss_dssp HHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHH
T ss_pred cccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhh
Confidence 34678899889999999999999999999999999 9999987 99999999999988653
No 117
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.84 E-value=1.9e-05 Score=61.28 Aligned_cols=113 Identities=15% Similarity=0.112 Sum_probs=74.1
Q ss_pred chhhhhc--CCceecCCCCcHHHHHHHHHHcCCceEEEecC-CCCEEEEEcchhHHHHHHhhhccCCCcHHHHhhhcccE
Q 041526 34 KVADMAH--KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNE-YGGTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTGYI 110 (252)
Q Consensus 34 ~l~~~~~--r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE-~G~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~~i 110 (252)
+++++|. +++.++++++++.++++.|++++.+..+|+|+ .|.++|+||..|++..+...- ... ...+. .+
T Consensus 3 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~--~~~-~~~v~----~~ 75 (130)
T 3hf7_A 3 SVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKK--EFT-KEIML----RA 75 (130)
T ss_dssp BHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSS--CCC-HHHHH----HH
T ss_pred CHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccC--ccc-hhhHH----Hh
Confidence 4677884 35789999999999999999999999999965 689999999999998875321 011 11111 01
Q ss_pred EEecCceEEEeCCcChHHhHhhc---CCC-CC---CCC---ccCCHHHHHHHHhCC
Q 041526 111 VMRAEGIYDVDANTSIDQLSEDL---NIK-MP---EGH---QYETVSGFVCEAFGY 156 (252)
Q Consensus 111 ~~~~dg~~~v~G~~~L~dl~~~l---gi~-l~---~~~---~~~TLaGlil~~lg~ 156 (252)
. ..-+.++..+++.++.+.+ ++. +| +++ +..|...++-..+|.
T Consensus 76 m---~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 76 A---DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp S---BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC-
T ss_pred c---cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCC
Confidence 1 1235688888888875544 332 22 111 124666666555553
No 118
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.83 E-value=2.3e-05 Score=63.34 Aligned_cols=58 Identities=12% Similarity=0.055 Sum_probs=50.6
Q ss_pred chhhhhc--CCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 34 KVADMAH--KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 34 ~l~~~~~--r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
.+.++|. ..+.+|+++.++.+++..|.+++....+|+|+.|.++|+||..|++..+..
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~ 75 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHH
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhh
Confidence 3556774 467899999999999999999999999999999999999999999988764
No 119
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.82 E-value=1.6e-05 Score=63.13 Aligned_cols=114 Identities=14% Similarity=0.118 Sum_probs=80.1
Q ss_pred cchhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEe-cC-CCCEEEEEcchhHHHHHHhhhccCCCcHHHHhhhcc
Q 041526 33 TKVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVL-NE-YGGTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTG 108 (252)
Q Consensus 33 ~~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVV-DE-~G~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~ 108 (252)
.+++++|.+ ++.++++++++.++++.|++++.+.++|+ |+ .|.++|+||..|++..+...- .. .-.+
T Consensus 20 ~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~--~~-~v~~------ 90 (153)
T 3oco_A 20 KVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD--KA-KIST------ 90 (153)
T ss_dssp CBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT--TS-BGGG------
T ss_pred CEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC--CC-cHHH------
Confidence 468899964 78999999999999999999999999999 65 489999999999998876432 11 1111
Q ss_pred cEEEecCceEEEeCCcChHHhHhhc---CCC-CC--CC-C---ccCCHHHHHHHHhCCCCC
Q 041526 109 YIVMRAEGIYDVDANTSIDQLSEDL---NIK-MP--EG-H---QYETVSGFVCEAFGYIPR 159 (252)
Q Consensus 109 ~i~~~~dg~~~v~G~~~L~dl~~~l---gi~-l~--~~-~---~~~TLaGlil~~lg~iP~ 159 (252)
+. ..-..+...+++.++.+.+ ++. +| .+ + +..|...++-..+|.+..
T Consensus 91 -~m---~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~d 147 (153)
T 3oco_A 91 -IM---RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRD 147 (153)
T ss_dssp -TC---BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC----
T ss_pred -Hh---CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCC
Confidence 11 1345788899998876554 332 22 21 1 236888888888876644
No 120
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.80 E-value=6.1e-05 Score=59.67 Aligned_cols=57 Identities=19% Similarity=0.304 Sum_probs=49.4
Q ss_pred chhhhhc------CCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 34 KVADMAH------KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 34 ~l~~~~~------r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
+++++|. +++.++++++++.++++.|++++.+.++|+| .|.++|+||..|++..+..
T Consensus 8 ~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~ 70 (157)
T 4fry_A 8 TVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVL 70 (157)
T ss_dssp BHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGG
T ss_pred HHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHh
Confidence 4777776 4568999999999999999999988888854 7999999999999988754
No 121
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.80 E-value=2e-05 Score=62.99 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=65.2
Q ss_pred cchhhhhcC--CceecCCCCcHHHHHHHHHHcCCceEEEecCCC-CEEEEEcchhHHHHHHhhhccCCCcHHHHhhhccc
Q 041526 33 TKVADMAHK--PAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYG-GTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTGY 109 (252)
Q Consensus 33 ~~l~~~~~r--~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G-~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~~ 109 (252)
.+++++|.+ ++.++++++++.++++.|++++....+|+|+.| .++|+||..|++..+... ... .-.++
T Consensus 38 ~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~--~~~-~v~~i------ 108 (156)
T 3oi8_A 38 LEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP--EQF-HLKSI------ 108 (156)
T ss_dssp CBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG--GGC-CHHHH------
T ss_pred CCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC--Ccc-cHHHH------
Confidence 468889964 688999999999999999999999999999875 999999999998875432 111 11111
Q ss_pred EEEecCceEEEeCCcChHHhHhhc
Q 041526 110 IVMRAEGIYDVDANTSIDQLSEDL 133 (252)
Q Consensus 110 i~~~~dg~~~v~G~~~L~dl~~~l 133 (252)
.. . -+.+...+++.++.+.+
T Consensus 109 -m~--~-~~~v~~~~~l~~a~~~m 128 (156)
T 3oi8_A 109 -LR--P-AVFVPEGKSLTALLKEF 128 (156)
T ss_dssp -CB--C-CCEEETTSBHHHHHHHH
T ss_pred -cC--C-CEEECCCCCHHHHHHHH
Confidence 11 1 35677888887766544
No 122
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.77 E-value=3.8e-05 Score=63.08 Aligned_cols=117 Identities=14% Similarity=0.083 Sum_probs=84.8
Q ss_pred cchhhhhc--CCceecCCCCcHHHHHHHHHHcCCceEEEecCC-CCEEEEEcchhHHHHHHhhhccCCCcHHHHhhhccc
Q 041526 33 TKVADMAH--KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY-GGTVGVVTLEDVVEEIVGEIFDESDSKEEIQKKTGY 109 (252)
Q Consensus 33 ~~l~~~~~--r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~-G~~vGIVTleDIleeIvGei~DE~d~~~~~~~~~~~ 109 (252)
.++.++|. +++.++++++++.++++.|++++....+|+|+. |.++|+||..|++..+...- ... -. .
T Consensus 36 ~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~--~~~-v~-~------ 105 (173)
T 3ocm_A 36 RSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG--RVR-RN-R------ 105 (173)
T ss_dssp SCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS--SCC-GG-G------
T ss_pred CCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC--cch-hH-h------
Confidence 45788885 457899999999999999999999999999886 89999999999999875331 111 00 1
Q ss_pred EEEecCceEEEeCCcChHHhHhhc---CCC-CC---CCC---ccCCHHHHHHHHhCCCCCCCcE
Q 041526 110 IVMRAEGIYDVDANTSIDQLSEDL---NIK-MP---EGH---QYETVSGFVCEAFGYIPRTGES 163 (252)
Q Consensus 110 i~~~~dg~~~v~G~~~L~dl~~~l---gi~-l~---~~~---~~~TLaGlil~~lg~iP~~Gd~ 163 (252)
...-+.+...+++.++.+.+ ++. +| +.+ +..|...++-..+|.+....+.
T Consensus 106 ----~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de~~~ 165 (173)
T 3ocm_A 106 ----LRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDEL 165 (173)
T ss_dssp ----SBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCCTTSC
T ss_pred ----cCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCCcccc
Confidence 11235688899998876544 333 22 222 2468899888888887765553
No 123
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.76 E-value=3.1e-05 Score=61.32 Aligned_cols=51 Identities=22% Similarity=0.229 Sum_probs=47.2
Q ss_pred CCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHHHh
Q 041526 41 KPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEIVG 91 (252)
Q Consensus 41 r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeIvG 91 (252)
+++.++++++++.++++.|++++...++|+|+.|.++|+||..|++..+..
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~ 79 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAE 79 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcc
Confidence 678899999999999999999999999999988999999999999987653
No 124
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.74 E-value=5.9e-05 Score=63.79 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=50.7
Q ss_pred ccchhhhhcCCceecCCCCcHHHHHHHHHHc---CCceEEEecCCCCEEEEEcchhHHH
Q 041526 32 STKVADMAHKPAYFVPDSMSVWNLLREFRIR---KVHMAVVLNEYGGTVGVVTLEDVVE 87 (252)
Q Consensus 32 ~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~---~~~~AiVVDE~G~~vGIVTleDIle 87 (252)
..++.++|.+++.++++++++.++++.|++. +.+.++|+|+.|.++|+||..|++.
T Consensus 53 ~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~ 111 (205)
T 3kxr_A 53 ENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFK 111 (205)
T ss_dssp TTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTT
T ss_pred cchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHh
Confidence 3468899988999999999999999999996 6788899999999999999999874
No 125
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.68 E-value=5.7e-05 Score=66.40 Aligned_cols=62 Identities=15% Similarity=0.181 Sum_probs=55.5
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCC--CCEEEEEcchhHHHHHHhhhc
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY--GGTVGVVTLEDVVEEIVGEIF 94 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~--G~~vGIVTleDIleeIvGei~ 94 (252)
..++++|.+++.+|.+++++.++.+.|.+++.+..+|||+. |.++|+||..||+..+...+.
T Consensus 13 ~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~ 76 (250)
T 2d4z_A 13 IQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRIS 76 (250)
T ss_dssp CBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHH
T ss_pred CChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhh
Confidence 45789999999999999999999999999999999999874 679999999999998866553
No 126
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.54 E-value=0.00011 Score=61.97 Aligned_cols=57 Identities=25% Similarity=0.268 Sum_probs=51.8
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHHHH
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVEEI 89 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIleeI 89 (252)
.+..++|.+++.++++++++.++++.|++++...++|+|+.|.++|+||..|++..+
T Consensus 13 ~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~ 69 (213)
T 1vr9_A 13 MKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLD 69 (213)
T ss_dssp CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSC
T ss_pred cCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhc
Confidence 456788989999999999999999999999999999999889999999999997543
No 127
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.48 E-value=0.00014 Score=64.38 Aligned_cols=56 Identities=13% Similarity=0.217 Sum_probs=50.9
Q ss_pred ccchhhhhcCCceecCCCCcHHHHHHHHHHc-----CCceEEEecCCCCEEEEEcchhHHH
Q 041526 32 STKVADMAHKPAYFVPDSMSVWNLLREFRIR-----KVHMAVVLNEYGGTVGVVTLEDVVE 87 (252)
Q Consensus 32 ~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~-----~~~~AiVVDE~G~~vGIVTleDIle 87 (252)
..++.++|.+++.++++++++.++++.|+++ +.+.++|+|+.|.++|+||..|++.
T Consensus 136 ~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~ 196 (286)
T 2oux_A 136 DETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIV 196 (286)
T ss_dssp TTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTT
T ss_pred hHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHc
Confidence 4568899988999999999999999999997 6777999999999999999999975
No 128
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.33 E-value=0.00037 Score=61.16 Aligned_cols=56 Identities=23% Similarity=0.326 Sum_probs=50.4
Q ss_pred cchhhhhcCCceecCCCCcHHHHHHHHHHc-----CCceEEEecCCCCEEEEEcchhHHHH
Q 041526 33 TKVADMAHKPAYFVPDSMSVWNLLREFRIR-----KVHMAVVLNEYGGTVGVVTLEDVVEE 88 (252)
Q Consensus 33 ~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~-----~~~~AiVVDE~G~~vGIVTleDIlee 88 (252)
.++.++|.+++.++++++++.++++.|++. +...++|+|+.|.++|+||..|++..
T Consensus 135 ~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~ 195 (278)
T 2yvy_A 135 DEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA 195 (278)
T ss_dssp TBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS
T ss_pred chHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC
Confidence 467889988899999999999999999987 67888899999999999999999853
No 129
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=96.83 E-value=0.00089 Score=45.73 Aligned_cols=43 Identities=28% Similarity=0.336 Sum_probs=31.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHHcCCc-ccccchhhhhcCCcee
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQKGEL-LESTKVADMAHKPAYF 45 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~~~~~-~~~~~l~~~~~r~~~~ 45 (252)
+||+++ ++++|+|+.+|++.++..... ....++.++|.+++.+
T Consensus 26 ~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 26 AVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp EEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred EEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeE
Confidence 589986 799999999999987643321 2345788999776654
No 130
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.81 E-value=0.00035 Score=67.13 Aligned_cols=51 Identities=16% Similarity=0.085 Sum_probs=45.9
Q ss_pred hhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHH
Q 041526 36 ADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVV 86 (252)
Q Consensus 36 ~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIl 86 (252)
.++|.+++.++++++++.++++.|++++....+|+|+.|.++|+||..|++
T Consensus 92 ~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 92 EAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR 142 (496)
T ss_dssp CC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT
T ss_pred ccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh
Confidence 345778899999999999999999999999999999999999999999986
No 131
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=96.68 E-value=0.00063 Score=67.01 Aligned_cols=61 Identities=8% Similarity=0.133 Sum_probs=54.7
Q ss_pred ccchhhhhc--CCceecCCCCcHHHHHHHHH-HcCCceEEEecCCCCEEEEEcchhHHHHHHhh
Q 041526 32 STKVADMAH--KPAYFVPDSMSVWNLLREFR-IRKVHMAVVLNEYGGTVGVVTLEDVVEEIVGE 92 (252)
Q Consensus 32 ~~~l~~~~~--r~~~~Vpe~~~l~~lL~~mr-~~~~~~AiVVDE~G~~vGIVTleDIleeIvGe 92 (252)
..+++++|. +++.++++++++.++++.|+ +++.+..+|+|+.|.++|+||..|++..+...
T Consensus 452 ~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~ 515 (632)
T 3org_A 452 EMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHV 515 (632)
T ss_dssp TSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC
T ss_pred cCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHH
Confidence 456899998 88999999999999999999 78899999999999999999999999876443
No 132
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=96.58 E-value=0.0014 Score=46.20 Aligned_cols=44 Identities=32% Similarity=0.446 Sum_probs=32.7
Q ss_pred CeEEecCCCCEEEEEEHHHHhHHHH-cCCcccccchhhhhcCCceec
Q 041526 1 VPVFEQRIDNIVGIAYAMDLLDYVQ-KGELLESTKVADMAHKPAYFV 46 (252)
Q Consensus 1 lPV~~~~~d~IvGiv~~kDll~~~~-~~~~~~~~~l~~~~~r~~~~V 46 (252)
+||.++ ++++|||+.+||++++. .+......+++++|.+++.+|
T Consensus 26 ~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 26 AVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred EEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 589875 68999999999986653 333333457899998887664
No 133
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=96.51 E-value=0.0039 Score=59.30 Aligned_cols=56 Identities=23% Similarity=0.327 Sum_probs=49.5
Q ss_pred ccchhhhhcCCceecCCCCcHHHHHHHHHHc-----CCceEEEecCCCCEEEEEcchhHHH
Q 041526 32 STKVADMAHKPAYFVPDSMSVWNLLREFRIR-----KVHMAVVLNEYGGTVGVVTLEDVVE 87 (252)
Q Consensus 32 ~~~l~~~~~r~~~~Vpe~~~l~~lL~~mr~~-----~~~~AiVVDE~G~~vGIVTleDIle 87 (252)
..++.++|.+++.++++++++.++++.|++. +....+|+|+.|.++|+||..|++.
T Consensus 154 ~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~ 214 (473)
T 2zy9_A 154 EDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIV 214 (473)
T ss_dssp TTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHH
T ss_pred CCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhc
Confidence 3457789988899999999999999999986 4577889998899999999999985
No 134
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.23 E-value=0.0077 Score=57.95 Aligned_cols=50 Identities=16% Similarity=0.185 Sum_probs=45.8
Q ss_pred hhcCCceecCCCCcHHHHHHHHHHcCCceEEEecC--CCCEEEEEcchhHHH
Q 041526 38 MAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNE--YGGTVGVVTLEDVVE 87 (252)
Q Consensus 38 ~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE--~G~~vGIVTleDIle 87 (252)
.|.+++.++++++++.++++.|++++....+|+|+ .|.++|+||..|+..
T Consensus 118 ~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~ 169 (511)
T 3usb_A 118 GVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF 169 (511)
T ss_dssp CSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT
T ss_pred ccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh
Confidence 45677899999999999999999999999999998 899999999999863
No 135
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.02 E-value=0.001 Score=63.31 Aligned_cols=53 Identities=23% Similarity=0.140 Sum_probs=0.4
Q ss_pred hhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHH
Q 041526 35 VADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVE 87 (252)
Q Consensus 35 l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIle 87 (252)
+.++|.+++.++++++++.++++.|++++...++|+|+.|.++|+||..|++.
T Consensus 97 ~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~ 149 (494)
T 1vrd_A 97 TENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRF 149 (494)
T ss_dssp C----------------------------------------------------
T ss_pred HhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHh
Confidence 35667788999999999999999999999999999998899999999999975
No 136
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.92 E-value=0.011 Score=55.92 Aligned_cols=53 Identities=11% Similarity=0.108 Sum_probs=48.5
Q ss_pred hhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEec--CCCCEEEEEcchhHHH
Q 041526 35 VADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLN--EYGGTVGVVTLEDVVE 87 (252)
Q Consensus 35 l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVD--E~G~~vGIVTleDIle 87 (252)
+.++|..++.+++++.++.++++.|++++....+|+| +.|.++|+||..|++.
T Consensus 92 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 92 SENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRF 146 (491)
T ss_dssp HTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred HHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhh
Confidence 4567878889999999999999999999999999999 7899999999999985
No 137
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.76 E-value=0.00062 Score=65.24 Aligned_cols=51 Identities=24% Similarity=0.167 Sum_probs=1.3
Q ss_pred hhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHH
Q 041526 35 VADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVV 86 (252)
Q Consensus 35 l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIl 86 (252)
+.++|..++.++++++++.++++.|++++....+|+| .|.++|+||..|+.
T Consensus 90 ~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~ 140 (490)
T 4avf_A 90 HETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLR 140 (490)
T ss_dssp CCC-------------------------------------------------
T ss_pred cccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhh
Confidence 3456778889999999999999999999999999999 79999999999996
No 138
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=95.13 E-value=0.0042 Score=59.49 Aligned_cols=53 Identities=15% Similarity=0.029 Sum_probs=26.5
Q ss_pred hhhhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecC---CCCEEEEEcchhHHH
Q 041526 35 VADMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNE---YGGTVGVVTLEDVVE 87 (252)
Q Consensus 35 l~~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE---~G~~vGIVTleDIle 87 (252)
+.++|.+++.++++++++.++++.|++++.+..+|+|+ .|.++|+||..|+..
T Consensus 110 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~ 165 (514)
T 1jcn_A 110 FEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDF 165 (514)
T ss_dssp CCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-
T ss_pred hhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHh
Confidence 44667788999999999999999999999999999998 589999999999876
No 139
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=94.51 E-value=0.0065 Score=58.24 Aligned_cols=49 Identities=16% Similarity=0.053 Sum_probs=0.0
Q ss_pred hcCCceecCCCCcHHHHHHHHHHcCCceEEEecCC---CCEEEEEcchhHHH
Q 041526 39 AHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEY---GGTVGVVTLEDVVE 87 (252)
Q Consensus 39 ~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~---G~~vGIVTleDIle 87 (252)
|.+++.++++++++.++++.|++++....+|+|+. |.++|+||..|++.
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~ 154 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPI 154 (503)
T ss_dssp ----------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHh
Confidence 66788999999999999999999999999999987 89999999999985
No 140
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=93.41 E-value=0.022 Score=54.21 Aligned_cols=50 Identities=14% Similarity=0.142 Sum_probs=0.0
Q ss_pred hhhcCCceecCCCCcHHHHHHHHHHcCCceEEEecCCCCEEEEEcchhHHH
Q 041526 37 DMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGVVTLEDVVE 87 (252)
Q Consensus 37 ~~~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE~G~~vGIVTleDIle 87 (252)
+.|..++.+++++.++.++++.|++++....+|+|+ +.++|+||..|++.
T Consensus 97 ~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~ 146 (486)
T 2cu0_A 97 RLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA 146 (486)
T ss_dssp ---------------------------------------------------
T ss_pred hccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc
Confidence 456678899999999999999999998888899988 99999999999874
No 141
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=92.71 E-value=0.042 Score=53.34 Aligned_cols=48 Identities=15% Similarity=0.012 Sum_probs=0.0
Q ss_pred hcCCceecCCCCcHHHHHHHHHHcCCceEEEecC---CCCEEEEEcchhHH
Q 041526 39 AHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNE---YGGTVGVVTLEDVV 86 (252)
Q Consensus 39 ~~r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVDE---~G~~vGIVTleDIl 86 (252)
+...|+++.++.++.+++..|++.+..-.+|+|+ .|.++||||-.|+-
T Consensus 144 ~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~r 194 (556)
T 4af0_A 144 FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQ 194 (556)
T ss_dssp ---------------------------------------------------
T ss_pred ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccc
Confidence 4467899999999999999999999988999975 57899999999974
No 142
>3ukx_C Bimax2 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; 2.20A {Mus musculus}
Probab=60.58 E-value=2.7 Score=23.76 Aligned_cols=14 Identities=50% Similarity=1.165 Sum_probs=11.4
Q ss_pred HhhcccCCCCCCCC
Q 041526 236 MKRKWSSDDEPPIE 249 (252)
Q Consensus 236 ~~~~~~~~~~~~~~ 249 (252)
-||.|..||.||-.
T Consensus 10 rkrewdddddppkk 23 (28)
T 3ukx_C 10 RKREWDDDDDPPKK 23 (28)
T ss_dssp CCCCCCCSSSCCSC
T ss_pred hhcccccCCCchhh
Confidence 37889999999853
No 143
>3iz6_Q 40S ribosomal protein S17 (S17E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=42.90 E-value=5.7 Score=31.67 Aligned_cols=57 Identities=21% Similarity=0.289 Sum_probs=41.3
Q ss_pred CCCCCccCCHHHHHHHHh---CCCCCCCcEEEEeeecccccccccccCCCCCccccccccceEEEEEEEecC
Q 041526 137 MPEGHQYETVSGFVCEAF---GYIPRTGESIKVVVEKENQEENDEDTENGSDRQDSKEKHQIYKLEILAGNA 205 (252)
Q Consensus 137 l~~~~~~~TLaGlil~~l---g~iP~~Gd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 205 (252)
+|+-.--.-+|||+.+.. .+=|..|=+|.++ ++-+.+++++.+....+..+++++|.
T Consensus 41 I~SKklRNkIAGYVThlmKriq~Gpvrgisiklq------------EeERerrdnyvpe~S~ld~~~ieVD~ 100 (141)
T 3iz6_Q 41 LPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQ------------EEERERRMDFVPEKSALEVEEIRVDK 100 (141)
T ss_dssp CCCTTTHHHHHHHHHHHHHHHCSCCCCCSSCCSS------------CCCCCSCSSSSCCCSEEEECCCCSSH
T ss_pred ccchhhhhhhhheeeehhhccccCCccccceehh------------HHHHHHHhccCCccccccccceeECH
Confidence 443323467999998876 4558889888884 34577889999988888877666653
No 144
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=38.97 E-value=30 Score=24.73 Aligned_cols=25 Identities=12% Similarity=0.361 Sum_probs=20.9
Q ss_pred CceEEEecCCCCEEEEEcchhHHHH
Q 041526 64 VHMAVVLNEYGGTVGVVTLEDVVEE 88 (252)
Q Consensus 64 ~~~AiVVDE~G~~vGIVTleDIlee 88 (252)
.+-+-++|+.|.-.|+++..+.+..
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHH
Confidence 4556689999999999999998764
No 145
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=32.32 E-value=38 Score=23.76 Aligned_cols=20 Identities=15% Similarity=0.262 Sum_probs=15.0
Q ss_pred ceEEEEEEEecCCeeeEEEEE
Q 041526 194 QIYKLEILAGNARKVSAVRFE 214 (252)
Q Consensus 194 ~~~~~~V~~~~~~ri~~V~i~ 214 (252)
+++.++|+++.++.| ++.|.
T Consensus 16 d~I~ItVl~v~g~~V-rLGI~ 35 (70)
T 2jpp_A 16 DDITITILGVSGQQV-RIGIN 35 (70)
T ss_dssp TTEEEEEEEEETTEE-EEEEE
T ss_pred CCEEEEEEEEeCCEE-EEEEE
Confidence 579999999998753 45554
No 146
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=30.07 E-value=45 Score=22.89 Aligned_cols=20 Identities=10% Similarity=0.205 Sum_probs=15.2
Q ss_pred ceEEEEEEEecCCeeeEEEEE
Q 041526 194 QIYKLEILAGNARKVSAVRFE 214 (252)
Q Consensus 194 ~~~~~~V~~~~~~ri~~V~i~ 214 (252)
++..++|+++.++.+ ++.|.
T Consensus 18 d~I~I~Vl~i~g~~V-rlGI~ 37 (63)
T 2bti_A 18 DEVTVTVLGVKGNQV-RIGVN 37 (63)
T ss_dssp TTEEEEEEEEETTEE-EEEEE
T ss_pred CCEEEEEEEEeCCEE-EEEEE
Confidence 579999999998753 45554
No 147
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=29.27 E-value=46 Score=23.55 Aligned_cols=20 Identities=10% Similarity=0.187 Sum_probs=15.3
Q ss_pred ceEEEEEEEecCCeeeEEEEE
Q 041526 194 QIYKLEILAGNARKVSAVRFE 214 (252)
Q Consensus 194 ~~~~~~V~~~~~~ri~~V~i~ 214 (252)
++++++|+++.+..| ++.|.
T Consensus 28 ddI~ItVl~i~g~qV-rLGI~ 47 (73)
T 1vpz_A 28 DDVTVTVLGVKGNQV-RIGVN 47 (73)
T ss_dssp TTEEEEEEEEETTEE-EEEEE
T ss_pred CCEEEEEEEEeCCEE-EEEEE
Confidence 579999999998753 45554
No 148
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=27.14 E-value=51 Score=22.49 Aligned_cols=26 Identities=19% Similarity=0.417 Sum_probs=18.6
Q ss_pred hHHhHhhcCCCCCCCC--c--cCCHHHHHH
Q 041526 126 IDQLSEDLNIKMPEGH--Q--YETVSGFVC 151 (252)
Q Consensus 126 L~dl~~~lgi~l~~~~--~--~~TLaGlil 151 (252)
+..+++.||+.+|.++ . +.|++.++-
T Consensus 46 v~~lE~~fgi~i~~~~l~~~~~~Tv~~l~~ 75 (83)
T 2amw_A 46 ITALEEYFDFSVDDDEISAQTFETLGSLAL 75 (83)
T ss_dssp HHHHHHHTTCCCCTTTCCGGGSSSHHHHHH
T ss_pred HHHHHHHhCCeeCHHhhhHHhcCCHHHHHH
Confidence 4557889999998654 3 678877653
No 149
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=26.86 E-value=89 Score=22.68 Aligned_cols=47 Identities=19% Similarity=0.157 Sum_probs=36.6
Q ss_pred ceecCCCCcHHHHHHHHHHcCC----c-eEE-EecCCCCEEEEEcchhHHHHH
Q 041526 43 AYFVPDSMSVWNLLREFRIRKV----H-MAV-VLNEYGGTVGVVTLEDVVEEI 89 (252)
Q Consensus 43 ~~~Vpe~~~l~~lL~~mr~~~~----~-~Ai-VVDE~G~~vGIVTleDIleeI 89 (252)
.+.+|.+.+..++.++++..=. + +.+ =+||.|+.+=|-|-+|+-+++
T Consensus 19 ~~~v~~~i~~~~L~~kv~~~~~~~~~~~f~lky~DEeGD~itisSd~EL~eAl 71 (89)
T 1vd2_A 19 ITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAF 71 (89)
T ss_dssp EEEECTTCCHHHHHHHHHHHTTCCSSCCEEEEECCSSSCCEECCSHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCeEEEEEECCCCCcccccCHHHHHHHH
Confidence 4678999999999999986321 1 211 158999999999999999987
No 150
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=22.73 E-value=1.9e+02 Score=22.34 Aligned_cols=48 Identities=13% Similarity=0.134 Sum_probs=40.4
Q ss_pred CCCCcHHHHHHHHHHcCCceEEEec-------------CCC--CEEEEEcchhHHHHHHhhhc
Q 041526 47 PDSMSVWNLLREFRIRKVHMAVVLN-------------EYG--GTVGVVTLEDVVEEIVGEIF 94 (252)
Q Consensus 47 pe~~~l~~lL~~mr~~~~~~AiVVD-------------E~G--~~vGIVTleDIleeIvGei~ 94 (252)
.++.+|...++.-+..+.++++||- -+| +-.|-++++|++..|..++.
T Consensus 44 r~~e~Lg~kIR~a~~~kvPy~lVVG~kE~e~~sVsVR~r~~~~~e~~~m~lde~i~~l~~~~~ 106 (130)
T 1v95_A 44 NTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQEHRNMPQADAMVLVARNYE 106 (130)
T ss_dssp TTSSCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEECSSSCCEEEEEEHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHcCCCEEEEEechHHhcCeeEEEecCCCCCccCccCHHHHHHHHHHHHH
Confidence 3378999999999999999999983 244 78999999999999877774
No 151
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=22.27 E-value=88 Score=20.63 Aligned_cols=31 Identities=23% Similarity=0.317 Sum_probs=24.5
Q ss_pred CCceecCCCCcHHHHHHHHHHcCCceEEEec
Q 041526 41 KPAYFVPDSMSVWNLLREFRIRKVHMAVVLN 71 (252)
Q Consensus 41 r~~~~Vpe~~~l~~lL~~mr~~~~~~AiVVD 71 (252)
.....+++.+++.++|+.+......+++-+|
T Consensus 7 g~~~~~~~~~tv~~ll~~l~~~~~~v~vavN 37 (66)
T 1f0z_A 7 DQAMQCAAGQTVHELLEQLDQRQAGAALAIN 37 (66)
T ss_dssp SCEECCCTTCCHHHHHHHHTCCCSSEEEEET
T ss_pred CEEEEcCCCCcHHHHHHHcCCCCCCEEEEEC
Confidence 3445678889999999999877777777776
No 152
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=21.49 E-value=60 Score=22.14 Aligned_cols=28 Identities=11% Similarity=0.388 Sum_probs=20.0
Q ss_pred hHHhHhhcCCCCCCCC----ccCCHHHHHHHH
Q 041526 126 IDQLSEDLNIKMPEGH----QYETVSGFVCEA 153 (252)
Q Consensus 126 L~dl~~~lgi~l~~~~----~~~TLaGlil~~ 153 (252)
+..+++.||+.+|.++ .+.|++.++-..
T Consensus 45 v~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i 76 (80)
T 1dv5_A 45 LLELQSQFGVDAPVSEFDRKEWDTPNKIIAKV 76 (80)
T ss_dssp HHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHH
T ss_pred HHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHH
Confidence 4557788999998543 467998876543
Done!