Citrus Sinensis ID: 041528

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------
Protein Sequence
MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKTSFQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGTGYMTMGAYSSSVDVANGSSSVSELEQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKSSSIDMKISGANCVPNGNEFVEMNKSNDSKFKSAEIDDVSDNSDSGYFRNGPKKAESNASFDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTEFGKHLTKEEDFALVDRASTKHGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVIKQELDEMHGLIDLNLPAPVEDEVIRDAEFSRW
Secondary Structure (PSIPRED)
ccccccccccEEcccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccHHHHcccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHccEEEEEccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccEEEEcccccccEEEEccccccccccccHHHcccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccEEEEcccccccHcccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccEccc
Coil and Loop (DISEMBL)
MEAANQKKKLFVCKycnkrypcgkslgghirthmnngnsaeaegegevkLNIDKifsgrnikkdscfeaggqsgyvlranpkrtrrfvdsntltsqqEMVCKECGKVFQSLKALCghmachsekdnkMKTSFQVhlegsdlkqklvmdsesdtetsapsrprrskgtgymtmgAYSSSvdvangsssvsELEQEQEEVAICLMMLSrdssgckkglnsfadssdnnsVVLEAKSssidmkisgancvpngnefvemnksndskfksaeiddvsdnsdsgyfrngpkkaesnasfdgfirtgkckksgveygpgfeefDAKFEKSSNKRTEFGKHLTKEEDFALVdrastkhgsrkrakndssspqifrnnaqkrsqfkcltcnkvfhsprslwghtashskingccesinessensretdsfpvpmpnskfcksvngktpiaqnlstnvdkrlgskkskghecpfcfrvfksgqalgghkrshfvggsedkTVVIKQELDEmhglidlnlpapvedevirdaefsrw
Flexible Loop (DISEMBL)
MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNsaeaegegEVKLNIDKIFSGRNIkkdscfeaggqsgyvlranpkrtrRFVDsntltsqqemVCKECGKVFQSLKALCGHMACHSEKDNKMKTSFQVHLEgsdlkqklvmdsesdtetsapsrprrskgtgYMTMGAYSSSVDVANGSSSVSELEQEQEEVAICLMMLSRDSSGCKKGLnsfadssdnnsVVLEAKsssidmkisgANCVPNGNEFVEMNKsndskfksaeiddvsdnsdsgyfrngpkkaesnasfdgfIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTefgkhltkeedfalvdrastkhgsrkrakndssspqifrnnaqkrsqfKCLTCNKVFHsprslwghtashsKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNgktpiaqnlstnvdKRLGSKKSKGHECPFCFRVFKsgqalgghkrshfvggsedKTVVIKQELDEMHglidlnlpapvedevirdaefsrw
Low Complexity Region (SEG)
MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMnngnsaeaegegeVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKTSFQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGTGYMTMGAYsssvdvangsssvseleqeqeevAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKSSSIDMKISGANCVPNGNEFVEMNKSNDSKFKSAEIDDVSDNSDSGYFRNGPKKAESNASFDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTEFGKHLTKEEDFALVDRASTKHGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCesinessensreTDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVIKQELDEMHGLIDLNLPAPVEDEVIRDAEFSRW
Disordered region (IsUnstruct)
********KLFVCKYCNKRYPCGKSLGGHIR*****************KLNIDKIFSGRNIKKDSCFEAGGQSGYVLRA*******FV*********EMVCKECGKVFQ*****************************************************************************************AICLMML*******************************************************************************************FIRTGKC************************************************************************QFKCLTCNKVFHSPRSLWGHTASHSKINGCC*******************************************************ECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVIKQELDEMHGLIDLNLPA***************
Disordered Region (DISOPRED)
**AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHM********************************************************************ECGKVFQSLKAL**************************************************************************************CLMMLS*****************************************************************************************************************************************************************************LTCNKVFHSPRSLWGHTASHSKING**********************************************************CPFCFRVFKSGQALGGHK*************************IDLNLPAPVEDEVIR*A*FS**
Disordered Region (DISEMBL)
MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKTSFQVHLEGSDLKQKLV******************KGTGYMTMGAYSSSVD*************EQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKSSSIDMKISGANCVPNGNEFVEMNKSNDSKFKSAEIDDVSDNSDSGYFRNGPKKAESNASFDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTEFGKHLTKEEDFALVDR*****************PQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCES**************PVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVIKQELDEMHGLIDLNLPAPVEDEVIRDAEFSRW
Disordered Region (DISPRO)
******KKKLFVCKYCNKRYPCGKSL*********************************************QSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGH**************************************************GY**********************EQEQEEVAICLMMLSRD*******L**********************************************************NSDSGYFRNGPKKAES**SFD****************************************TKEEDFALVDRASTKHG*********************RSQFKCLTCNKVFHSPRSLWGH***************************************************************KGHECPFCFRVFKSGQAL*****************************IDLN*PAPV*************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKTSFQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGTGYMTMGAYSSSVDVANGSSSVSELEQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKSSSIDMKISGANCVPNGNEFVEMNKSNDSKFKSAEIDDVSDNSDSGYFRNGPKKAESNASFDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTEFGKHLTKEEDFALVDRASTKHGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVIKQELDEMHGLIDLNLPAPVEDEVIRDAEFSRW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	527	2.2.26 [Sep-21-2011]
Q9SHD0	314	Zinc finger protein ZAT4	no	no	0.214	0.359	0.370	1e-17
Q9M202	288	Zinc finger protein ZAT9	no	no	0.360	0.659	0.334	7e-16
Q39092	267	Zinc finger protein ZAT1	no	no	0.199	0.393	0.364	3e-12
O65499	284	Zinc finger protein ZAT3	no	no	0.212	0.394	0.310	2e-09
Q681X4	286	Zinc finger protein ZAT5	no	no	0.258	0.475	0.291	8e-09
Q9SIJ0	270	Zinc finger protein ZAT2	no	no	0.201	0.392	0.335	4e-08
Q9SSW2	273	Zinc finger protein AZF2	no	no	0.296	0.571	0.309	9e-07
Q9SSW1	245	Zinc finger protein AZF1	no	no	0.246	0.530	0.298	2e-06
Q9SSW0	193	Zinc finger protein AZF3	no	no	0.261	0.715	0.278	7e-06
O22533	238	Zinc finger protein ZAT6	no	no	0.333	0.739	0.264	4e-05

>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1

 Score = 92.0 bits (227), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 74/154 (48%), Gaps = 41/154 (26%)

Query: 370 NAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNS 429
           +++ R +FKC TC KVF S ++L GH ASH K   C                        
Sbjct: 187 SSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKAC------------------------ 222

Query: 430 KFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFV---- 485
                      + +      +  LG K+ K HECP CFRVF SGQALGGHKRSH      
Sbjct: 223 -----------MTKTEQVETEYVLGVKEKKVHECPICFRVFTSGQALGGHKRSHGSNIGA 271

Query: 486 --GGSEDKTVVIKQELDEMHGLIDLNLPAPVEDE 517
             G S  + V I++E+     +IDLNLPAP E++
Sbjct: 272 GRGLSVSQIVQIEEEVSVKQRMIDLNLPAPNEED 305

Probable transcription factor that may be involved in stress responses.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 105/245 (42%), Gaps = 55/245 (22%)

Query: 286 KKAESNASFDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTEFGKHLTKEEDFALVD 345
           K+++     D F+ T K K S + Y P   E D +   SS   T      T EED A   
Sbjct: 82  KRSKRTRKLDSFV-TKKVKTSQLGYKP---ESDQEPPHSSASDT------TTEEDLAFCL 131

Query: 346 RASTKHGSRKRAKNDSSSPQIFR----------NNAQKRSQFKCLTCNKVFHSPRSLWGH 395
              ++   +K   N     +I            N A  + ++KC TC KVF S ++L GH
Sbjct: 132 MMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCETCGKVFKSYQALGGH 191

Query: 396 TASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGS 455
            ASH K         + SE   E D+  V                        V KR+  
Sbjct: 192 RASHKKNRVSNNKTEQRSET--EYDNVVV------------------------VAKRI-- 223

Query: 456 KKSKGHECPFCFRVFKSGQALGGHKRSHFVGG-SEDKTVVIKQELDEMHGLIDLNLPAPV 514
                HECP C RVF SGQALGGHKRSH VG  S ++   + +       +IDLNLPAP 
Sbjct: 224 -----HECPICLRVFASGQALGGHKRSHGVGNLSVNQQRRVHRNESVKQRMIDLNLPAPT 278

Query: 515 -EDEV 518
            EDEV
Sbjct: 279 EEDEV 283

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39092|ZAT1_ARATH Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1

 Score = 73.9 bits (180), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 67/151 (44%), Gaps = 46/151 (30%)

Query: 377 FKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVN 436
           F+C TC KVF S ++L GH ASH K                ETD                
Sbjct: 160 FECETCEKVFKSYQALGGHRASHKK-------------KIAETD---------------- 190

Query: 437 GKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSE---DKTV 493
                 Q  S  + K+     S  HECP C +VF SGQALGGHKRSH    +E      +
Sbjct: 191 ------QLGSDELKKKKKKSTSSHHECPICAKVFTSGQALGGHKRSHASANNEFTRRSGI 244

Query: 494 VIKQELDEMHGLIDLNLPAPVEDEVIRDAEF 524
           +I         LIDLNLPAP E+E +  + F
Sbjct: 245 II--------SLIDLNLPAPSEEEEMASSVF 267

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|O65499|ZAT3_ARATH Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 36/148 (24%)

Query: 376 QFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSV 435
           +F+C  C KVF S ++L GH ASH  + GC    N + +                     
Sbjct: 161 RFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDD--------------------- 199

Query: 436 NGKTPIAQNLSTNVDKRLGSKKSKGH-ECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVV 494
               P+  + S+  D +       GH +C  CFRVF SGQALGGH R H+          
Sbjct: 200 ----PMTVSTSSGHDHQGKILTFSGHHKCNICFRVFSSGQALGGHMRCHWE--------- 246

Query: 495 IKQELDEMHGLIDLNLPAPVEDEVIRDA 522
            K+E   + G +DLN+P  ++D    D 
Sbjct: 247 -KEEEPMISGALDLNVPPTIQDLSTSDT 273

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 32/168 (19%)

Query: 377 FKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKS-V 435
           ++C TCN+ F S ++L GH ASH K     E          E    P+  P S   +   
Sbjct: 115 YECKTCNRTFSSFQALGGHRASHKKPRTSTE----------EKTRLPLTQPKSSASEEGQ 164

Query: 436 NGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVI 495
           N    ++ +   +    + +K +K HEC  C   F SGQALGGH R H    +    V  
Sbjct: 165 NSHFKVSGSALASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHRTAVTTISPVAA 224

Query: 496 KQEL------DEM-------------HGLIDLNLPAPVEDEVIRDAEF 524
             E+      +E+             +  +DLNLPAP +D  +R+++F
Sbjct: 225 TAEVSRNSTEEEIEINIGRSMEQQRKYLPLDLNLPAPEDD--LRESKF 270

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIJ0|ZAT2_ARATH Zinc finger protein ZAT2 OS=Arabidopsis thaliana GN=ZAT2 PE=2 SV=1

 Score = 60.1 bits (144), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 62/137 (45%), Gaps = 31/137 (22%)

Query: 376 QFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSV 435
           +F+C  C KVF S ++L GH A+H  + GC  + N + +         V     K  K V
Sbjct: 147 RFECDGCKKVFGSHQALGGHRATHKDVKGCFANKNITEDPPPPPPQEIVDQDKGKSVKLV 206

Query: 436 NGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVI 495
           +G                       H C  C RVF SGQALGGH R H+    +D     
Sbjct: 207 SGMN---------------------HRCNICSRVFSSGQALGGHMRCHW---EKD----- 237

Query: 496 KQELDEMHGLIDLNLPA 512
            QE +++ G IDLN+PA
Sbjct: 238 -QEENQVRG-IDLNVPA 252

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW2|AZF2_ARATH Zinc finger protein AZF2 OS=Arabidopsis thaliana GN=AZF2 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 81/210 (38%), Gaps = 54/210 (25%)

Query: 335 LTKEEDFALVDRASTK-HGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLW 393
           LT+EE  AL      K   S+ R    S S  +      K   +KC  C K F S ++L 
Sbjct: 65  LTEEEYLALCLLMLAKDQPSQTRFHQQSQS--LTPPPESKNLPYKCNVCEKAFPSYQALG 122

Query: 394 GHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNG-KTPIAQNLSTNVDKR 452
           GH ASH         I   +  S   D    P         V G K PIA +        
Sbjct: 123 GHKASHR--------IKPPTVISTTADDSTAPT-----ISIVAGEKHPIAAS-------- 161

Query: 453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHF--------------VGGSEDKTVVIKQE 498
                 K HEC  C +VF +GQALGGHKR H+              +  S   +  + +E
Sbjct: 162 -----GKIHECSICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSEE 216

Query: 499 LDEMHGLIDLNLPA---------PVEDEVI 519
                G IDLNLPA         P+ DE I
Sbjct: 217 RSH-RGFIDLNLPALPELSLHHNPIVDEEI 245

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner. Acts as a negative regulator of abscisic acid (ABA) signaling during seed germination. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade. May act as a positive regulator of leaf senescence. Has been identified as a suppressor of the deficiency of yeast snf4 mutant to grow on non-fermentable carbon source.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW1|AZF1_ARATH Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1

 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 31/161 (19%)

Query: 330 EFGKHLTKEEDFA-----LVDRASTKHGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNK 384
           E  K+L  EE++      ++ R S             +SP   R+       +KC  C K
Sbjct: 52  ETNKNLPSEEEYLALCLLMLARGSAVQSPPLPPLPSRASPSDHRD-------YKCTVCGK 104

Query: 385 VFHSPRSLWGHTASHSK-INGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQ 443
            F S ++L GH  SH K  N    S N+   N+  ++S  V +                 
Sbjct: 105 SFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVI----------------- 147

Query: 444 NLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHF 484
           N++ N    + S+  K H C  CF+ F SGQALGGHKR H+
Sbjct: 148 NVTVNTGNGV-SQSGKIHTCSICFKSFASGQALGGHKRCHY 187

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW0|AZF3_ARATH Zinc finger protein AZF3 OS=Arabidopsis thaliana GN=AZF3 PE=1 SV=1

 Score = 52.8 bits (125), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 72/205 (35%), Gaps = 67/205 (32%)

Query: 283 NGPKKAESNASFDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTEFGKHLTKEEDFA 342
           N P+  E    F+G  +  KCKK                 K S         LT+EE  A
Sbjct: 7   NSPRLVEDPLRFNGVEQWTKCKKR---------------SKRSRSDLHHNHRLTEEEYLA 51

Query: 343 LVDRASTKHGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKI 402
                  + G       D  S  +    A+K S +KC  C K F S ++L GH ASH  +
Sbjct: 52  FCLMLLARDG------GDLDSVTV----AEKPS-YKCGVCYKTFSSYQALGGHKASHRSL 100

Query: 403 NGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHE 462
            G         EN + T S  V                                  K H 
Sbjct: 101 YG-------GGENDKSTPSTAV----------------------------------KSHV 119

Query: 463 CPFCFRVFKSGQALGGHKRSHFVGG 487
           C  C + F +GQALGGHKR H+ GG
Sbjct: 120 CSVCGKSFATGQALGGHKRCHYDGG 144

Transcriptional repressor probably involved in abiotic stress responses. Binds DNA in a sequence-specific manner and can repress the transactivation activity of other transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|O22533|ZAT6_ARATH Zinc finger protein ZAT6 OS=Arabidopsis thaliana GN=ZAT6 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 36/212 (16%)

Query: 319 AKFEKSSNKRTEFGKH-LTKEEDFALVDRASTKHGSRKRAKNDSSSPQIFRNNAQKRSQ- 376
           +K ++S   R+EF +  LT++E  AL      + G R R  +  SS           +  
Sbjct: 29  SKGKRSKRSRSEFDRQSLTEDEYIALCLMLLARDGDRNRDLDLPSSSSSPPLLPPLPTPI 88

Query: 377 FKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVN 436
           +KC  C+K F S ++L GH ASH K      S+ +S+     + S            S  
Sbjct: 89  YKCSVCDKAFSSYQALGGHKASHRK----SFSLTQSAGGDELSTS------------SAI 132

Query: 437 GKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVIK 496
             + I+     +V         K H C  C + F +GQALGGHKR H+ G +        
Sbjct: 133 TTSGISGGGGGSV---------KSHVCSICHKSFATGQALGGHKRCHYEGKNGGGVSSSV 183

Query: 497 QELDEM---------HGLIDLNLPAPVEDEVI 519
              +++         H   DLN+P   E  ++
Sbjct: 184 SNSEDVGSTSHVSSGHRGFDLNIPPIPEFSMV 215

Probable transcription factor that regulates root development and phosphate (Pi) acquisition and homeostasis. Probably acts as a repressor of primary root growth and regulates Pi homeostasis through the control of root architecture.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	527
225423513	522	PREDICTED: uncharacterized protein LOC10	0.920	0.929	0.514	1e-129
224112130	497	predicted protein [Populus trichocarpa]	0.914	0.969	0.512	1e-120
255542084	519	hypothetical protein RCOM_1621120 [Ricin	0.924	0.938	0.508	1e-120
147819420	509	hypothetical protein VITISV_040088 [Viti	0.895	0.927	0.479	1e-116
224098958	509	predicted protein [Populus trichocarpa]	0.920	0.952	0.491	1e-114
359491301	563	PREDICTED: uncharacterized protein LOC10	0.912	0.854	0.440	1e-88
255547263	557	hypothetical protein RCOM_1470470 [Ricin	0.941	0.890	0.416	9e-85
2081604	554	PEThy; ZPT4-2 [Petunia x hybrida]	0.954	0.907	0.425	4e-83
15222739	455	C2H2-like zinc finger protein [Arabidops	0.804	0.931	0.417	4e-80
357487487	514	PEThy ZPT4-2 [Medicago truncatula] gi|35	0.863	0.885	0.429	1e-77

>gi|225423513|ref|XP_002274495.1| PREDICTED: uncharacterized protein LOC100245765 [Vitis vinifera]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/546 (51%), Positives = 353/546 (64%), Gaps = 61/546 (11%)

Query: 1   MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRN 60
           ME  +QK K  VCK CNKRYP GKSLGGH+R+HM  GNSAEA      +  I  +  GR+
Sbjct: 1   MEEEDQKTK-HVCKLCNKRYPSGKSLGGHMRSHMI-GNSAEAA----ERKKISSLNGGRS 54

Query: 61  IKKDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMAC 120
            KK+S FE GG S Y LR NPK+T R  +S +  SQQE VCKECGKVFQSLKALCGHMAC
Sbjct: 55  SKKESGFEGGGHSAYGLRENPKKTWRLANSRS-GSQQENVCKECGKVFQSLKALCGHMAC 113

Query: 121 HSEKDNKMKTSFQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGTGY-MTMGAYSSSV 179
           HSEK+ ++ ++ + H   ++  QK VMD           R +RSK T +  T+  Y S  
Sbjct: 114 HSEKE-RLSSNLEDH-SWTNASQKPVMD-----------RRKRSKRTNFNRTLAVYPSP- 159

Query: 180 DVANGSSSVSELEQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKSSSIDM 239
                  SVS+ EQEQ+E+AICLMMLSRDS G   GLNS   SSDNNSVVLEAKSSSIDM
Sbjct: 160 -------SVSDTEQEQQELAICLMMLSRDS-GHWGGLNSLVYSSDNNSVVLEAKSSSIDM 211

Query: 240 KI---SGANCVPNGNEFVEMNKSNDSKFKSAEIDDVS---DNSDSGYFRNGPKKAESNAS 293
           +I      NCV +G+E VE  K  D K KSA +D  +   +NSDSGYF NG ++ ES+ S
Sbjct: 212 RICRGEDMNCVSDGDEIVETKKLGDGKSKSAVLDSEAGPFENSDSGYFMNGAQRVESDVS 271

Query: 294 FDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNK------------------RTEFGKHL 335
            DG  R  +  +  +E G GF+ F A+  K   +                  +TE GK L
Sbjct: 272 VDGVFRNVESLELKLEDGSGFDVFGAESGKGLKRLKCMKAGLGKDLKRPKCVKTELGKGL 331

Query: 336 TKEEDFALVDRASTKHGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGH 395
            K+E +  V+RAS ++   KRAKNDS S +    N +KRS+++CLTCNK FHS ++L GH
Sbjct: 332 LKQEGYDRVNRASVEYDLSKRAKNDSYSEE----NVRKRSKYQCLTCNKTFHSHQALGGH 387

Query: 396 TASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGS 455
            A+H ++ GC  S  ES ENS ETD+ P P P+ K  +  +GKTPIAQ+LS   +K++GS
Sbjct: 388 RANHKRVEGCNSSNYESIENSIETDTCPGPTPHKKLARFGSGKTPIAQDLSGKAEKKIGS 447

Query: 456 KKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSED---KTVVIKQELDEMHGLIDLNLPA 512
           +KS GH CP CF+VF+SGQALGGHK+SHFVG  ED   +T+VIKQE  E+ GLIDLNLPA
Sbjct: 448 RKSNGHMCPICFKVFRSGQALGGHKKSHFVGVCEDENSRTLVIKQEPLEIPGLIDLNLPA 507

Query: 513 PVEDEV 518
           P+E+E 
Sbjct: 508 PIEEEA 513

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112130|ref|XP_002316093.1| predicted protein [Populus trichocarpa] gi|222865133|gb|EEF02264.1| predicted protein [Populus trichocarpa]

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 275/537 (51%), Positives = 343/537 (63%), Gaps = 55/537 (10%)

Query: 4   ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMN-NGNSAEAEGEGEVKLNIDKIFSGRNIK 62
           ANQK   FVCK+CNKRYPCGKSLGGHIR H+N NG S+  E   E K+ + K  S  N K
Sbjct: 3   ANQKNN-FVCKFCNKRYPCGKSLGGHIRIHLNANGTSSTDE---EAKVQVSKTES--NSK 56

Query: 63  KDSCFEAGGQSGYVLRANPKRTRRFV-DSNTLTSQQEMVCKECGKVFQSLKALCGHMACH 121
           + S  EA GQSGYVLR NPK+  RFV DS+  TS  E VCKECGK FQSLKALCGHMACH
Sbjct: 57  QISVPEAVGQSGYVLRENPKKKSRFVADSSNTTSLPEKVCKECGKGFQSLKALCGHMACH 116

Query: 122 SEKDNKMKTSFQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGTGYMTMGAYSSSVDV 181
           S      K  FQ     ++  +++V D++SD+ET+ P +PRRSK   Y T+  +++S+  
Sbjct: 117 S------KNYFQDQSGTTEKLKEIVSDNQSDSETTDPRKPRRSKRMRYKTIDVFTTSL-- 168

Query: 182 ANGSSSVSELEQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKSSSIDMKI 241
               SS S++EQEQEEVA CLMMLS+DS G K   +S ADSSDNNSVVLE KSSS   +I
Sbjct: 169 ----SSTSDIEQEQEEVAKCLMMLSKDS-GFKGCFSSLADSSDNNSVVLEGKSSSTKTRI 223

Query: 242 S---GANCVPNGNEFVEMNKSNDSKFKSAEIDDVSDNSDSGYFRNGPKKAESNASFDGFI 298
           +     N V +G E +E+ KS      S E +D S+NSDSGYFR GPKK ES+ S  GF 
Sbjct: 224 NVNNAVNFVSSGIESLEVKKSMQRGVISTE-NDQSENSDSGYFRKGPKKVESDVSVHGFA 282

Query: 299 RTGKCKKSGVEYGPGFEE-FDAKFEKSSNK----RTEFGKHLTKEEDFALVDRASTKHGS 353
           R  + KK  VE+G  +++  DA+  K  ++    RT+ GK   +E+ +   DRAS    S
Sbjct: 283 RNDEIKKYKVEFGSSYDDAIDAESGKRLSRFRRVRTQLGKDFIEEDVYDQADRASMD--S 340

Query: 354 RKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESS 413
           +KR KN+S     +   + +R   KC+           L G  ASH+K NGC +SI ES 
Sbjct: 341 QKRCKNES-----YEFLSSRRG--KCVP----------LGGRRASHNKTNGCSDSIYESG 383

Query: 414 ENSRETDSFPVPMPNS-KFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKS 472
           ENS +TD  P P+PNS +  +S +GKTPI QN S N +K LG KK K HECPFC +VF+S
Sbjct: 384 ENSVDTDYVPNPIPNSSRMIQSRSGKTPIEQNSSGNAEKNLGLKKGKLHECPFCPKVFRS 443

Query: 473 GQALGGHKRSHFVGGSEDKTVVIKQELDE--MHGLIDLNLPAPVEDEVIRDAEFSRW 527
           GQALGGHKRSHF G + D+TVVIKQ++ E  M GLIDLNLP  VE+E      F  W
Sbjct: 444 GQALGGHKRSHFAGAARDRTVVIKQDVPEISMRGLIDLNLPVSVEEEA---GGFGPW 497

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542084|ref|XP_002512106.1| hypothetical protein RCOM_1621120 [Ricinus communis] gi|223549286|gb|EEF50775.1| hypothetical protein RCOM_1621120 [Ricinus communis]

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 272/535 (50%), Positives = 345/535 (64%), Gaps = 48/535 (8%)

Query: 5   NQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG----EGEVKLNIDKIFSGRN 60
           N KKKLF+CK+CNKRYPCGKSLGGHIR H+N   +         E ++KLN  K F+  N
Sbjct: 4   NAKKKLFICKFCNKRYPCGKSLGGHIRIHLNGNGNGYGNSTDIEEEDMKLNTSKSFAAAN 63

Query: 61  I---KKDSCFEAGGQSGYVLRANPKRTRRFV-DSNTLTSQQEMVCKECGKVFQSLKALCG 116
           +   K++   EAG +SGY LR NPK+T+RF+ DS+     QE VCKECGK FQSLKALCG
Sbjct: 64  VSNSKQELELEAGARSGYGLRENPKKTKRFMADSSKGNLLQEKVCKECGKGFQSLKALCG 123

Query: 117 HMACHSEKDNKMKTSFQVHLEGSDLKQKLVMDSESDTETS-APSRPRRSKGTGYMTMGAY 175
           HMACHS      K SF+   E ++  +  V DS+SDTETS APS+ RRSK   Y  +G Y
Sbjct: 124 HMACHS------KNSFEDQSETTEKLKDQVFDSQSDTETSSAPSKRRRSKRMRYKAIGVY 177

Query: 176 SSSVDVANGS-SSVSELEQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKS 234
           SSS+ + NGS SS S++EQEQEEVA CLMMLS+DS G K   +S ADSSDN SVVLE KS
Sbjct: 178 SSSLSLVNGSLSSASDVEQEQEEVAKCLMMLSKDS-GFKGCFSSVADSSDN-SVVLETKS 235

Query: 235 SSIDMKIS---GANCVPNGNEFVEMNKSNDSKFKSAEIDDVSDNSDSGYFRNGPKKAESN 291
           SS  ++IS   G +CV NGN  +E+ K+   +  S   ++ S+NSDSGYF+NGPKK ES+
Sbjct: 236 SSPKLRISVKNGVSCVYNGNGILEIKKAKQHEVMSVG-NEYSENSDSGYFKNGPKKVESD 294

Query: 292 ASFDGFIRTGKCKKSGVEYGPGFE-----EFDAKFEKSSNKRTEFGKHLTKEEDFALVDR 346
            S  GF    + KK  +E+G  FE     E   +  +    +TE GK L +E+ +   D 
Sbjct: 295 ISVHGFTGIDEFKKQKIEFGSRFEDGFSPELGKRLSRVRRIKTELGKDLIEEDGYGETDG 354

Query: 347 ASTKHGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCC 406
           AS K+ SRKR K +   P++  N A K       TC  V             H + NGC 
Sbjct: 355 ASFKYDSRKRDKRND--PELLSNIASK-------TCIGV---------QRTRHRRTNGCS 396

Query: 407 ESINESSENSRETDSFPVPMP-NSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPF 465
           ES+  S ENS ETD  P P+P ++K  +S NGKT I Q LS +V+K+L  +K K HECPF
Sbjct: 397 ESVYGSGENSIETDCAPSPLPSHNKKSQSCNGKTAIEQKLSGSVEKKLSLRKGKIHECPF 456

Query: 466 CFRVFKSGQALGGHKRSHFVGGSEDKTVVIKQELDE--MHGLIDLNLPAPVEDEV 518
           CF+VF+SGQALGGHKRSHFVGG++D+T+VI Q++ E  M  LIDLNLPAPVE++ 
Sbjct: 457 CFKVFRSGQALGGHKRSHFVGGAQDRTLVINQQVSEISMPALIDLNLPAPVEEDA 511

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147819420|emb|CAN60166.1| hypothetical protein VITISV_040088 [Vitis vinifera]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 262/546 (47%), Positives = 336/546 (61%), Gaps = 74/546 (13%)

Query: 1   MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRN 60
           ME  +QK K  VCK CNKRYP GKSLGGH+R+HM  GNSAEA      +  I  +  GR+
Sbjct: 1   MEEEDQKTK-HVCKLCNKRYPSGKSLGGHMRSHMI-GNSAEAA----ERKKISSLNGGRS 54

Query: 61  IKKDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMAC 120
            KK S FE GG S Y LR NPK+T R  +                + F + ++LCGHMAC
Sbjct: 55  SKKXSGFEGGGHSAYGLRENPKKTWRLANFK--------------EWFTARESLCGHMAC 100

Query: 121 HSEKDNKMKTSFQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGTGY-MTMGAYSSSV 179
           HSEK+ ++ ++ + H   ++  QK VMD           R +RSK T +  T+  Y S  
Sbjct: 101 HSEKE-RLSSNLEDH-SWTNASQKPVMD-----------RRKRSKRTNFNRTLAVYPSP- 146

Query: 180 DVANGSSSVSELEQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKSSSIDM 239
                  SVS+  QEQ+E+AICLMMLSRDS G   GLNS   SSDNNSVVLEAKSSSIDM
Sbjct: 147 -------SVSDTXQEQQELAICLMMLSRDS-GHWGGLNSLVYSSDNNSVVLEAKSSSIDM 198

Query: 240 KI---SGANCVPNGNEFVEMNKSNDSKFKSAEIDDVS---DNSDSGYFRNGPKKAESNAS 293
           +I      NCV +G+E VE  K  D K KSA +D  +   +NSDSGYF NG ++ ES+ S
Sbjct: 199 RICRGEDMNCVSDGDEIVETKKLGDGKSKSAVLDSEAGPFENSDSGYFMNGAQRVESDVS 258

Query: 294 FDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNK------------------RTEFGKHL 335
            DG  R  +  +  +E G GF+ F A+  K   +                  +TE GK L
Sbjct: 259 VDGVFRNVESLELKLEDGSGFDVFGAESGKGLKRLKCMKAGLGKDLKRPKCVKTELGKGL 318

Query: 336 TKEEDFALVDRASTKHGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGH 395
            K+E +  V+RAS ++   KRAKNDS S +    N +KRS+++CLTCNK FHS ++L GH
Sbjct: 319 LKQEGYDRVNRASVEYDLSKRAKNDSYSEE----NVRKRSKYQCLTCNKTFHSHQALGGH 374

Query: 396 TASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGS 455
            A+H ++ GC  S  ES ENS ETD+ P P P+ K  +  +GKTPIAQ+LS   +K++GS
Sbjct: 375 RANHKRVEGCNSSNYESIENSIETDTCPGPTPHKKLARFGSGKTPIAQDLSGKAEKKIGS 434

Query: 456 KKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSED---KTVVIKQELDEMHGLIDLNLPA 512
           +KS GH CP CF+VF+SGQALGGHK+SHFVG  ED   +T+VIKQE  E+ GLIDLNLPA
Sbjct: 435 RKSNGHMCPICFKVFRSGQALGGHKKSHFVGVCEDENSRTLVIKQEPLEIPGLIDLNLPA 494

Query: 513 PVEDEV 518
           P+E+E 
Sbjct: 495 PIEEEA 500

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098958|ref|XP_002311333.1| predicted protein [Populus trichocarpa] gi|222851153|gb|EEE88700.1| predicted protein [Populus trichocarpa]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 260/529 (49%), Positives = 337/529 (63%), Gaps = 44/529 (8%)

Query: 4   ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKK 63
            NQK   FVCKYCNKRYPCGKSLGGHIR H+N   +   + + +VK++  +  S    K+
Sbjct: 3   TNQKNN-FVCKYCNKRYPCGKSLGGHIRIHLNANGTCSTDEDAKVKMSTTENKS----KQ 57

Query: 64  DSCFEAGGQSGYVLRANPKRTRRFV-DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHS 122
            S  EAGGQ GY LR NPK+T RFV DS+  TS  E +CKECGK FQSLKALCGHMACHS
Sbjct: 58  ISVSEAGGQFGYALRENPKKTTRFVADSSNTTSLPEQLCKECGKGFQSLKALCGHMACHS 117

Query: 123 EKDNKMKTSFQVHLEGSDLKQK-LVMDSESDTETSAPSRPRRSKGTGYMTMGAYSSSVDV 181
                 K  FQ    G+ +K K ++MD +SD+ET+ P  PRRSK   Y  +  Y+SS+ +
Sbjct: 118 ------KNFFQDQ-SGATMKLKGIIMDKQSDSETTDPIEPRRSKRMRYKAIDVYTSSLSL 170

Query: 182 ANGSS--SVSELEQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKSSSIDM 239
            N +S  S S++EQEQEEVA  LMMLS+DS G K   +S ADSSDNNSVVLE KSS + M
Sbjct: 171 TNTASLSSTSDIEQEQEEVAKSLMMLSKDS-GFKGCFSSVADSSDNNSVVLEGKSSYMKM 229

Query: 240 KIS---GANCVPNGNEFVEMNKSNDSKFKSAEIDDVSDNSDSGYFRNGPKKAESNASFDG 296
           +I+   G N V +G E +EM K+      SAE +D S+NSDSGYFRNGPKK ES+ S  G
Sbjct: 230 RINVNDGINFVSSGIESLEMKKATQRGVNSAE-NDQSENSDSGYFRNGPKKVESDVSVHG 288

Query: 297 FIRTGKCKKSGVEYGPGFE-EFDA----KFEKSSNKRTEFGKHLTKEEDFALVDRASTKH 351
           F R G+ KK  V+    ++ E DA    +   S + RT+ GK    ++ +   DRA    
Sbjct: 289 FARNGEFKKQEVDSVFSYDDELDAESGKRLSMSRHIRTQLGKDFIVDDVYNQGDRALMD- 347

Query: 352 GSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINE 411
            S+K  KN+S     + +++ +    KC+          SL G   SH++INGC +SI E
Sbjct: 348 -SQKGCKNESCE---YLSSSVRNRGSKCV----------SLGGRRTSHNRINGCSDSIYE 393

Query: 412 SSENSRETDSFPVPMPNS-KFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVF 470
           S ENS +TD  P P+ NS K  +S +GKTPI ++ S   +K+LG K  K HECPFC +VF
Sbjct: 394 SGENSVDTDYVPNPIANSSKMIQSRSGKTPIEKSSSGKAEKKLGLKIEKVHECPFCPKVF 453

Query: 471 KSGQALGGHKRSHFVGGSEDKTVVIKQELDEM--HGLIDLNLPAPVEDE 517
           +SGQALGGHKRSHF+G +  + VVI+Q++ E+   GLIDLNLP  +E+E
Sbjct: 454 RSGQALGGHKRSHFIGAARVRPVVIEQDVPEISTRGLIDLNLPVSMEEE 502

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491301|ref|XP_002281438.2| PREDICTED: uncharacterized protein LOC100241686 [Vitis vinifera]

 Score =  333 bits (854), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 243/552 (44%), Positives = 304/552 (55%), Gaps = 71/552 (12%)

Query: 12  VCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGG 71
           VCK+C K +PCG+SLGGH+R+HM N     +  E + KL+  K+ S      +   E   
Sbjct: 14  VCKFCKKSFPCGRSLGGHMRSHMIN-----SSFETDEKLSKTKLSSLHKAATNPGSETAT 68

Query: 72  QSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKTS 131
           Q GY LR NPK+T R  DS+  TS     CK+CGK FQS KAL GHM  HSEK+ ++  S
Sbjct: 69  QIGYGLRENPKKTWRIADSSEDTSLLGKFCKDCGKGFQSWKALFGHMRSHSEKE-RLSNS 127

Query: 132 FQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGTGYMTMGAYSSSVDVANGSSSVSEL 191
            +     +   QKLVMDS+SDTET+ P+R +RS+        A SSS   AN SSSVSE+
Sbjct: 128 LEEEDSWTSANQKLVMDSQSDTETAVPNRKKRSRRRTRYMATATSSSFSFANASSSVSEI 187

Query: 192 EQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKSS-------SIDMKISGA 244
           EQEQEEVAI LMMLSRD SG   GLNS  +SSDNNSV LEA SS        I+ K +  
Sbjct: 188 EQEQEEVAISLMMLSRD-SGNWGGLNSVTESSDNNSVFLEAPSSFPTNRNTRIESKTTNG 246

Query: 245 NCVPNGNEFVEMNK-SNDSKFKSAEIDD--------VSDNSDSGYFRNGPKKAESNASFD 295
            C  +G E V++ K   D KF  + +D          S+   SG  RN  K  +S     
Sbjct: 247 -C--DGGEVVKLKKLIKDEKFNPSALDSEDFQFYCKQSEFGASGNSRNDSKLNKSEV--- 300

Query: 296 GFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTEFGKHLTKEEDFALVDRASTKHGSRK 355
             + T K  K  VE G        +FE S N   E GK L KE      +  S K+ S K
Sbjct: 301 --LETNKSNKLKVEDG-------FRFESSEN---ELGKKLVKENGLDQAELFSIKYNSNK 348

Query: 356 RAKNDSSSPQIFRN-----------------NAQKRSQFKCLTCNKVFHSPRSLWGHTAS 398
           R   D   P++  N                 ++QKRS+F+C TCNK FHS ++L GH AS
Sbjct: 349 RKFRDFYDPELKVNCSKKTTNNDGTDSEICRDSQKRSKFECTTCNKTFHSYQALGGHRAS 408

Query: 399 HSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTP----------IAQNLSTN 448
           H KI GC  S  +SSENS + +  P P  +SK  K  N  +P           A   +  
Sbjct: 409 HKKIKGCFASRIDSSENSIDPELSPDPTADSKLTKPCNNHSPSRSPGPIHGHTASASAVK 468

Query: 449 VDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDK---TVVIKQELDEMHGL 505
            +  LGSKKSKGHECP C +VF SGQALGGHKRSH VGGS+ +   T+VI + L E+  L
Sbjct: 469 AETILGSKKSKGHECPICLKVFSSGQALGGHKRSHLVGGSDTRGSQTIVIPKPLPEIRDL 528

Query: 506 IDLNLPAPVEDE 517
           +DLNLPAP E+E
Sbjct: 529 LDLNLPAPAEEE 540

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547263|ref|XP_002514689.1| hypothetical protein RCOM_1470470 [Ricinus communis] gi|223546293|gb|EEF47795.1| hypothetical protein RCOM_1470470 [Ricinus communis]

 Score =  320 bits (821), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 234/562 (41%), Positives = 314/562 (55%), Gaps = 66/562 (11%)

Query: 6   QKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKI-------FSG 58
           Q+ K  VCK+C+K + CG+SLGGH+R+HM N  SA+A+G    K  +  +          
Sbjct: 5   QELKQHVCKFCSKSFSCGRSLGGHMRSHMINDISAQADGTKLTKKKLPSLTNYNNNGADN 64

Query: 59  RNIKKDSCFEAGGQSGYVLRANPKRTRRFV---DSNTLTSQQEMVCKECGKVFQSLKALC 115
            N   ++   +   +GY LR NPK+T R V    S+  TS  +  CKECG+VFQS KAL 
Sbjct: 65  NNKNNNTTTISADITGYGLRENPKKTWRIVADHHSSEDTSLVDKSCKECGRVFQSWKALF 124

Query: 116 GHMACHS--EKDNKMKTSFQVHLE-------GSDLKQKLVMDSESDTETSAPSRPRRSKG 166
           GHM CH   EK+    ++    LE        S   QKLVMDS+SD ET+AP+R +RSK 
Sbjct: 125 GHMKCHPSLEKEKVKASNINNSLEEEQQDSWTSANNQKLVMDSQSDNETAAPNRRKRSKR 184

Query: 167 TG-YMTMGAYSSSVDVAN---GSSSVSEL-EQEQEEVAICLMMLSRDSSGCKKGLNSFAD 221
              YM   A SSS+  AN    SSSVSE+ +QEQEEVA+CLMMLSRD      GLNS A+
Sbjct: 185 RTRYMGGTANSSSLSFANNINASSSVSEIDQQEQEEVAMCLMMLSRDVGQWGSGLNSVAE 244

Query: 222 SSDNNSVVLEAK---SSSIDMKISGANCVPNGNEFVEMNKSNDSKFKSAEIDDVSDNSDS 278
           SSDN+SV LE     SS  ++K S    V NG E +++    D K    E DD+   S  
Sbjct: 245 SSDNSSVFLENNNLVSSRNEVKAS----VCNGTETLKVKNFGDKKNGKLEDDDLRVESRK 300

Query: 279 GYFRNGPKKAESNASFDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTEFGKHLTKE 338
             F           S  G  R G  K   V+  P  +E  A+     N   E GK+L+KE
Sbjct: 301 SEF-----------SVSGISRKGFTKNDKVKKSPADDERAAE-----NSAVELGKNLSKE 344

Query: 339 EDFALVDRASTKHGSRKRAKNDSSSPQI---FRNNAQKRSQFKCLTCNKVFHSPRSLWGH 395
            D       S+K  S KR  +DS  P++   +  N+ + S+F+C TCNKVFHS ++L GH
Sbjct: 345 TDMI-----SSKRNSNKRKYDDSFHPELKSDYLKNSDRSSRFECTTCNKVFHSYQALGGH 399

Query: 396 TASHSKINGCCESINESSENSRETDSFPVPMPNSKF-CKSVNGKTPIAQNLSTNVDKR-- 452
            ASH K  GC  S ++S+ENS ET+  P P  +SK   KS+  +  + Q L+   D +  
Sbjct: 400 RASHKKTKGCFASRSDSNENSIETELSPDPTADSKLIIKSIKNEISVDQ-LAIERDNKAE 458

Query: 453 --LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSE----DKTVVIKQEL-DEMHGL 505
              G+KKSKGHECP CF+VF SGQALGGHKRSH + G++    D+++ +++ +   +   
Sbjct: 459 TSYGAKKSKGHECPVCFKVFPSGQALGGHKRSHLLAGTDQGKNDRSISVQESMPPPIRDF 518

Query: 506 IDLNLPAPVEDEVIRDAEFSRW 527
           +DLNLPAP E+E      F+ W
Sbjct: 519 LDLNLPAPAEEESNGLVGFNPW 540

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2081604|dbj|BAA19926.1| PEThy; ZPT4-2 [Petunia x hybrida]

 Score =  315 bits (807), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 238/560 (42%), Positives = 310/560 (55%), Gaps = 57/560 (10%)

Query: 11  FVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFS--GRNIKKD--SC 66
           + CK CNKRYPCGKS GGH+R+H+   NSA+ E + E K      ++  G+  K+D  S 
Sbjct: 9   YFCKLCNKRYPCGKSFGGHMRSHVL-ANSAKLEEKVEFKQKKVPSWTNGGKIHKRDHKSK 67

Query: 67  FEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDN 126
           FE G  SGY LR NPK+T R  DS +   + + VC++CGKVFQSLKALCGHMACHS KD 
Sbjct: 68  FEHGEHSGYGLRDNPKKTWRISDSRSPLPR-DNVCQQCGKVFQSLKALCGHMACHSGKDR 126

Query: 127 KMKTSFQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGTGYMTMGAYSSSVDVANGSS 186
            MK       E     + LVMDS SDTE   P    +S    Y  + A SSS    N  S
Sbjct: 127 GMKDDNSWTSE----TKNLVMDSNSDTEAEEPRLRSKSNSKRYNRLIAKSSSFCFVNNKS 182

Query: 187 SVSEL----EQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVVLEAKSSSIDMKI- 241
             S +    +QEQEEVA CLMMLS D+  C  G+NS  +SSDNNSVVLE KSSS+DMKI 
Sbjct: 183 VSSSVSEIDDQEQEEVAKCLMMLSMDTWICN-GVNSIVESSDNNSVVLETKSSSVDMKIE 241

Query: 242 --SGANCVPNGNEFVEMNKSNDSKFKSAEI--DDVSDNSDSGYFRNGPKKAESNASFDGF 297
                 CV N +E     K  D   K   +  +  S+NSDS YF    KK ES+AS D F
Sbjct: 242 RKDSPKCVNNLDETPRSKKKADRNLKLDLLNAEAQSENSDSEYFLGEYKKVESDASVDEF 301

Query: 298 IRTG--KCKKSGVEYGPGFEEFDA----KFEKSSNKRTEFGKHLTKE---EDFALVDRAS 348
            R G  +   S    G  F+E       +  +  N  T+  K L+K+   + + +V    
Sbjct: 302 HRNGNYQWNTSNTSLGCWFDESGPAEKKELTRMKNYVTDSRKDLSKDYKYDSYGMVSHLD 361

Query: 349 TKHGSRKRAKNDSSSPQI----FRN------------NAQKRSQFKCLTCNKVFHSPRSL 392
            K  SRKR K+ S  P +    F+N            + QK+ +++CL C K F S ++L
Sbjct: 362 -KRESRKRIKDSSYPPNLSNETFKNVKPSFKSPEGSKHTQKKKKYECLNCKKTFSSYQAL 420

Query: 393 WGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQ--NLSTNVD 450
            GH   +   N   ES  E+ ENSR+ D+ P  +   K  ++++ K P A   + S+N +
Sbjct: 421 GGHRPCNKNTNAYFESTYETGENSRDADNGPNYINKGKHRETLSNK-PAAHSHDYSSNPE 479

Query: 451 KRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDK---TVVIKQELDEMHGLID 507
           K++  KK KGH CPFC R+FKSGQALGGHKRSHF+  SE+    + V  + +D    L+D
Sbjct: 480 KKMKPKKFKGHACPFCPRMFKSGQALGGHKRSHFIVSSENHYQASAVQGKIVD----LLD 535

Query: 508 LNLPAPVEDEVIRDAEFSRW 527
           LNLPAPVED V  +  F  W
Sbjct: 536 LNLPAPVED-VNGEPAFVSW 554

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15222739|ref|NP_173983.1| C2H2-like zinc finger protein [Arabidopsis thaliana] gi|9797768|gb|AAF98586.1|AC013427_29 Contains similarity to C2H2 zinc finger protein (PEThy;ZPT4-2) from Petunia hybrida gb|AB000456 and contains three Zinc finger (C2H2 type) PF|00096 motifs [Arabidopsis thaliana] gi|225897972|dbj|BAH30318.1| hypothetical protein [Arabidopsis thaliana] gi|332192588|gb|AEE30709.1| C2H2-like zinc finger protein [Arabidopsis thaliana]

 Score =  305 bits (780), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 224/537 (41%), Positives = 290/537 (54%), Gaps = 113/537 (21%)

Query: 7   KKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSC 66
           K++ FVCK+C+KR+PCGKSLGGHIRTHMN  ++   E E +    ID             
Sbjct: 5   KERKFVCKFCSKRFPCGKSLGGHIRTHMNENSADSDEDEADKLKMID------------- 51

Query: 67  FEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMV----------CKECGKVFQSLKALCG 116
            E GGQS Y LR NPK+ +RFVD   + + ++            C+ECGK F S KALCG
Sbjct: 52  -ENGGQSSYGLRENPKKNKRFVDHRQIMALKQQQQQQQLQELRRCRECGKGFVSSKALCG 110

Query: 117 HMACHSEKDNKMKTSFQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGT-------GY 169
           HMACHSE+                  +K+VMDS+SDTE S+    RRSK           
Sbjct: 111 HMACHSER------------------EKIVMDSQSDTEASSSPIRRRSKRVVVKPHHKAA 152

Query: 170 MTMGAYSSSVDVANGSSSVSELEQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVV 229
             +G         + SS  SE+E EQEE+A  LMMLSRDSS  KKG NS A+SSDNNSV+
Sbjct: 153 FVVGGNGIMNQSISASSDASEIEPEQEEMARSLMMLSRDSS-FKKGHNSLAESSDNNSVI 211

Query: 230 LEAKSSSIDMKISGANCVPNGNEFVEMNK-SNDSKFKSAEID-DV---SDNSDSGYFRNG 284
           LE KSSS + ++   N V N  E  + NK   D++ +S E + DV   SDNSDSGYFRNG
Sbjct: 212 LETKSSSGE-QVKMFN-VKNVEELCKKNKLVVDNQMRSGEENGDVHYDSDNSDSGYFRNG 269

Query: 285 PKKAESNASFDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTEFGKHLTKEEDFALV 344
           PKK +S+ S DGF R     K+ +  G GF     K ++  N+   F K   KE      
Sbjct: 270 PKKLDSDVSVDGFFRN----KTIMGSGSGFNSSPTKQDRDMNR---FRKEWYKEGGSGSG 322

Query: 345 DRAS---TKHGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGHTASHSK 401
             +    TK+  RK       S + F ++ +K+ +++                       
Sbjct: 323 SGSGRSSTKYDLRK-------SKRGFPSHGRKKIKYEF---------------------- 353

Query: 402 INGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKK-SKG 460
                ES+ +S E+S ETDS          C   N +T    + S  V K  G+KK SKG
Sbjct: 354 ----TESVYDSGEHSLETDS----------CADTN-RTIKIHSKSPMVKKANGAKKKSKG 398

Query: 461 HECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVIKQEL-DEMHGLIDLNLPAPVED 516
           HECP CFRVFKSGQALGGHKRSHF+G  E +T+VI+ ++  EMH LIDLNLPAP+++
Sbjct: 399 HECPICFRVFKSGQALGGHKRSHFIGNQEHRTLVIQHQVAHEMHTLIDLNLPAPIDE 455

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357487487|ref|XP_003614031.1| PEThy ZPT4-2 [Medicago truncatula] gi|355515366|gb|AES96989.1| PEThy ZPT4-2 [Medicago truncatula]

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 238/554 (42%), Positives = 297/554 (53%), Gaps = 99/554 (17%)

Query: 12  VCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLN--IDKIF---SGRNIKKDSC 66
           VCKYC KR+PCGKSLGGHIRTHM + NS ++  E  +  N  ++ +F    GR  K+   
Sbjct: 5   VCKYCLKRFPCGKSLGGHIRTHMMSENSLQSNEEKRMNANASVNAMFKFDEGRKRKRLDL 64

Query: 67  FEAGGQSG-------YVLRANPKRTRRFVDSNTL-TSQQEMVCKECGKVFQSLKALCGHM 118
              GG SG       Y LR NPK+T RFV SN   T Q E  CKECGK F SLKALCGHM
Sbjct: 65  GSNGGGSGGDDGNLIYGLRENPKKTTRFVHSNAAATVQMEKFCKECGKGFPSLKALCGHM 124

Query: 119 ACHSEKD---NKMKTSFQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGTGYMTMGA- 174
           ACHSEKD   N++++     + G   KQKLVMDS+SDTE S  +  RRS+   +  +   
Sbjct: 125 ACHSEKDKGANRIES-----VSGVREKQKLVMDSQSDTEASVQTDSRRSRRMKFKNLSGG 179

Query: 175 -----YSSSVDVANGSSSVSELEQEQEEVAICLMMLSRDSSGCKKGLNSFADSSDNNSVV 229
                 SSS+   N SSSVSE+EQEQE+VA CLM+LSRDS+  K       +SSDNNSVV
Sbjct: 180 GGDNKSSSSLHWGNCSSSVSEVEQEQEDVARCLMLLSRDST-YKGRFPLVTESSDNNSVV 238

Query: 230 LEAKSSSIDMKIS----GANCVP---NGNEFVEMNKSNDSKFKSAEIDDVSDNSDSGYFR 282
           +E KS S+D K +    G N V    NG E  E   + D K KS EI  VSDNSDSGYF 
Sbjct: 239 VEEKSPSVDTKFAVMNRGKNIVGAKNNGFELAEKKLNKDGKMKSVEIGYVSDNSDSGYFT 298

Query: 283 NGPKKAESNASFDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNKRTEFGKHLTKEEDFA 342
            GPKK ES+ S DGF R    K S V Y   F++ D  FE                    
Sbjct: 299 YGPKKVESDDSSDGFFRN-DAKSSKVGYFSSFQDHD--FE-------------------- 335

Query: 343 LVDRASTKHGSRKRAKNDSSSPQIFRNNAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKI 402
               +S K  SR R +N +   ++   N+ K++  K    N+V+ S   L     S+S+ 
Sbjct: 336 ----SSKKIISRGRNRNSAEFKKVVLENSSKKT--KNGYNNEVYES---LKIDRESYSE- 385

Query: 403 NGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHE 462
               +S  ES ENS E+DS+P P   S   K++NGKT    +       +    K   HE
Sbjct: 386 ----DSAYESDENSSESDSYPAPKAQSN--KNMNGKTNKKSSYKGKKKMKSKKSKE--HE 437

Query: 463 CPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVIKQELDEMH------------------- 503
           CP C ++FKSGQALGGHKRSHF+GG++D T+VI+                          
Sbjct: 438 CPICNKIFKSGQALGGHKRSHFIGGNDDNTLVIRPAAAAHAHAAPAAHAHAAPAPPAFAA 497

Query: 504 ----GLIDLNLPAP 513
                L DLNLPAP
Sbjct: 498 AANPSLFDLNLPAP 511

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	527
TAIR|locus:2197890	455	AT1G26610 "AT1G26610" [Arabido	0.586	0.679	0.408	3.7e-74
TAIR|locus:2197915	361	AT1G26590 "AT1G26590" [Arabido	0.447	0.653	0.339	2.3e-27
TAIR|locus:2055583	314	AT2G45120 "AT2G45120" [Arabido	0.140	0.235	0.506	3e-24
TAIR|locus:2103311	288	AT3G60580 "AT3G60580" [Arabido	0.151	0.277	0.494	1.1e-21
TAIR|locus:2205649	267	AT1G02030 "AT1G02030" [Arabido	0.140	0.277	0.443	1.7e-18
TAIR|locus:2122118	284	DAZ2 "AT4G35280" [Arabidopsis	0.149	0.278	0.358	3.8e-15
TAIR|locus:2059672	270	DAZ1 "AT2G17180" [Arabidopsis	0.110	0.214	0.428	3.6e-14
TAIR|locus:2156435	493	AT5G56200 "AT5G56200" [Arabido	0.187	0.200	0.315	9.2e-13
TAIR|locus:2083053	215	AT3G49930 "AT3G49930" [Arabido	0.157	0.386	0.402	4.2e-12
TAIR|locus:2205583	324	AT1G02040 "AT1G02040" [Arabido	0.062	0.101	0.606	6.6e-11

TAIR|locus:2197890 AT1G26610 "AT1G26610" [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
 Identities = 152/372 (40%), Positives = 192/372 (51%)

Query:     7 KKKLFVCKYCNKRYPCGKSLGGHIRTHMXXXXXXXXXXXXXVKLNIDKIFSGRNIKKDSC 66
             K++ FVCK+C+KR+PCGKSLGGHIRTHM                  DK+   + I     
Sbjct:     5 KERKFVCKFCSKRFPCGKSLGGHIRTHMNENSADSDEDEA------DKL---KMID---- 51

Query:    67 FEAGGQSGYVLRANPKRTRRFVDSNTLTS-----QQEMV-----CKECGKVFQSLKALCG 116
              E GGQS Y LR NPK+ +RFVD   + +     QQ+ +     C+ECGK F S KALCG
Sbjct:    52 -ENGGQSSYGLRENPKKNKRFVDHRQIMALKQQQQQQQLQELRRCRECGKGFVSSKALCG 110

Query:   117 HMACHSEKDNKMKTSFQVHLEGSDLKQKLVMDSESDTETSAPSRPRRSKGT-------GY 169
             HMACHSE++                  K+VMDS+SDTE S+    RRSK           
Sbjct:   111 HMACHSERE------------------KIVMDSQSDTEASSSPIRRRSKRVVVKPHHKAA 152

Query:   170 MTMGAYXXXXXXXXXXXXXXXXXXXXXXXAICLMMLSRDSSGCKKGLNSFADSSDNNSVV 229
               +G                         A  LMMLSRDSS  KKG NS A+SSDNNSV+
Sbjct:   153 FVVGGNGIMNQSISASSDASEIEPEQEEMARSLMMLSRDSS-FKKGHNSLAESSDNNSVI 211

Query:   230 LEAKSSSIDMKISGANCVPNGNEFVEMNKSN-DSKFKSAEID-DV---SDNSDSGYFRNG 284
             LE KSSS + ++   N V N  E  + NK   D++ +S E + DV   SDNSDSGYFRNG
Sbjct:   212 LETKSSSGE-QVKMFN-VKNVEELCKKNKLVVDNQMRSGEENGDVHYDSDNSDSGYFRNG 269

Query:   285 PKKAESNASFDGFIRTGKCKKSGVEYGPGFEEFDAKFEKSSNK-RTEFGKHLTKEEDFAL 343
             PKK +S+ S DGF R     K+ +  G GF     K ++  N+ R E+ K          
Sbjct:   270 PKKLDSDVSVDGFFRN----KTIMGSGSGFNSSPTKQDRDMNRFRKEWYKEGGSGSGSGS 325

Query:   344 VDRASTKHGSRK 355
               R+STK+  RK
Sbjct:   326 -GRSSTKYDLRK 336

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2197915 AT1G26590 "AT1G26590" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
 Identities = 94/277 (33%), Positives = 129/277 (46%)

Query:   143 QKLVMD--SESDTETSAPSRPRRSKGTGYMTMGAYXXXXXXXXXXXXXXXXXXXXXXXAI 200
             +K++MD  S+SDTE+   S P R K +  + M                          A 
Sbjct:    90 KKMLMDDNSQSDTESETSSAPMR-KRSKRVVMKQSNSESLSNGSSSFGSEIDQERRDGAY 148

Query:   201 CLMMLSRDSSGCKKG----LNSFADSSDNNSVVLEAKSSSIDMKISGANCVPNGNEFVEM 256
              LMMLS DSS  KK     +NS  +SSDNNS ++E KSSS             G+EF  M
Sbjct:   149 NLMMLSSDSSSFKKRRNMVMNSLGESSDNNSAIVENKSSS-------------GDEFKIM 195

Query:   257 NKSN--DSKFKSAEIDDVS----DNSDSGYFRNGPKKAESNASFDGFIRTGKCKKSGVEY 310
             N  N  D +++SA+ D VS    D SDS YF NGP K+ES+ S D    TG        +
Sbjct:   196 NVKNAVDDQWRSADDDGVSLCDSDGSDSDYFMNGPSKSESDISVDR--NTG--------F 245

Query:   311 GPGFEEFDAKFEKSSNKRTEFGKHLTKEEDFAL-VDR-ASTKHGSRKRAKNDSSSPQIFR 368
             G GF     +F  S+   T++    +K   F+   D  A T      R K DS S  + +
Sbjct:   246 GSGFNNSLIRFRNSNEGGTKYELSKSKRALFSYETDSCADTNSKIHHRFK-DSKSSMVKK 304

Query:   369 NNAQK-RSQ-FKCLTCNKVFHSPRSLWGHTASHSKIN 403
                +K +S+  +C  C ++F S ++L GH  SHS  N
Sbjct:   305 EGGEKVKSKGHECPICFRMFKSGQALGGHKRSHSIAN 341

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2055583 AT2G45120 "AT2G45120" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.0e-24, Sum P(3) = 3.0e-24
 Identities = 41/81 (50%), Positives = 50/81 (61%)

Query:   453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHF--VGG----SEDKTVVIKQELDEMHGLI 506
             LG K+ K HECP CFRVF SGQALGGHKRSH   +G     S  + V I++E+     +I
Sbjct:   235 LGVKEKKVHECPICFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQRMI 294

Query:   507 DLNLPAPVEDEVIRDAEFSRW 527
             DLNLPAP E++      F  W
Sbjct:   295 DLNLPAPNEEDET-SLVFDEW 314

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2103311 AT3G60580 "AT3G60580" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
 Identities = 42/85 (49%), Positives = 49/85 (57%)

Query:   436 NGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG-SEDKTVV 494
             N KT   Q   T  D  +   K + HECP C RVF SGQALGGHKRSH VG  S ++   
Sbjct:   202 NNKTE--QRSETEYDNVVVVAK-RIHECPICLRVFASGQALGGHKRSHGVGNLSVNQQRR 258

Query:   495 IKQELDEMHGLIDLNLPAPVE-DEV 518
             + +       +IDLNLPAP E DEV
Sbjct:   259 VHRNESVKQRMIDLNLPAPTEEDEV 283

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2205649 AT1G02030 "AT1G02030" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
 Identities = 35/79 (44%), Positives = 44/79 (55%)

Query:   446 STNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVIKQELDEMHGL 505
             S  + K+     S  HECP C +VF SGQALGGHKRSH    +E       +    +  L
Sbjct:   194 SDELKKKKKKSTSSHHECPICAKVFTSGQALGGHKRSHASANNE-----FTRRSGIIISL 248

Query:   506 IDLNLPAPVEDEVIRDAEF 524
             IDLNLPAP E+E +  + F
Sbjct:   249 IDLNLPAPSEEEEMASSVF 267

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2122118 DAZ2 "AT4G35280" [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
 Identities = 33/92 (35%), Positives = 47/92 (51%)

Query:   428 NSKFCKSVNGKT--PIAQNLSTNVDKRLGSKKSKGH-ECPFCFRVFKSGQALGGHKRSHF 484
             N K C ++   T  P+  + S+  D +       GH +C  CFRVF SGQALGGH R H+
Sbjct:   186 NVKGCFAITNVTDDPMTVSTSSGHDHQGKILTFSGHHKCNICFRVFSSGQALGGHMRCHW 245

Query:   485 VGGSEDKTVVIKQELDEMHGLIDLNLPAPVED 516
                        K+E   + G +DLN+P  ++D
Sbjct:   246 E----------KEEEPMISGALDLNVPPTIQD 267

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2059672 DAZ1 "AT2G17180" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
 Identities = 30/70 (42%), Positives = 37/70 (52%)

Query:   450 DKRLGSKKSKG--HECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVVIKQELDEMHGLID 507
             DK    K   G  H C  C RVF SGQALGGH R H+    +D      QE +++ G ID
Sbjct:   198 DKGKSVKLVSGMNHRCNICSRVFSSGQALGGHMRCHW---EKD------QEENQVRG-ID 247

Query:   508 LNLPAPVEDE 517
             LN+PA    +
Sbjct:   248 LNVPAATSSD 257

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

TAIR|locus:2156435 AT5G56200 "AT5G56200" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 9.2e-13, Sum P(4) = 9.2e-13
 Identities = 36/114 (31%), Positives = 50/114 (43%)

Query:   371 AQKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCXXXXXXXXXXXXTDSFPVPMPNSK 430
             A  R +  C+TCNK F S ++L GH ASH+K+                  +  +      
Sbjct:   336 AGAREKHVCVTCNKSFSSYQALGGHRASHNKVKILENHQARANAEASLLGTEAI------ 389

Query:   431 FCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHF 484
                 + G   +A    TN    L S  +  H C  C + F +GQALGGHKR H+
Sbjct:   390 ----ITG---LASAQGTNTS--LSSSHNGDHVCNICHKSFSTGQALGGHKRCHW 434

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2083053 AT3G49930 "AT3G49930" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
 Identities = 37/92 (40%), Positives = 46/92 (50%)

Query:   435 VNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDKTVV 494
             VN       N + N+   L  +  K H C  CF+ F SGQALGGHKR H+ GG+ +    
Sbjct:   124 VNNSNGTVTN-NGNISNGLVGQSGKTHNCSICFKSFPSGQALGGHKRCHYDGGNGNSNG- 181

Query:   495 IKQELDEMHGLIDLNLPAP-VEDEVIRDAEFS 525
                  D  H   DLNLPA  V DE I  ++ S
Sbjct:   182 -----DNSHKF-DLNLPADQVSDETIGKSQLS 207

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

TAIR|locus:2205583 AT1G02040 "AT1G02040" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
 Identities = 20/33 (60%), Positives = 24/33 (72%)

Query:   453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFV 485
             +  K+S  HEC  C RVF SGQALGGHKR H++
Sbjct:   217 IARKRSNAHECTICHRVFSSGQALGGHKRCHWL 249

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00030062001 SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (522 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	527
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	6e-04
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	0.003

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 14/23 (60%), Positives = 16/23 (69%)

Query: 461 HECPFCFRVFKSGQALGGHKRSH 483
           H C  C + F S QALGGHK+SH
Sbjct: 2   HTCGVCGKTFSSLQALGGHKKSH 24

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 34.9 bits (81), Expect = 0.003
 Identities = 12/21 (57%), Positives = 13/21 (61%)

Query: 101 CKECGKVFQSLKALCGHMACH 121
           C  CGK F SL+AL GH   H
Sbjct: 4   CGVCGKTFSSLQALGGHKKSH 24

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	527
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.97
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.89
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.86
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.83
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.82
KOG3608	467	consensus Zn finger proteins [General function pre	99.59
KOG3576	267	consensus Ovo and related transcription factors [T	99.54
KOG3608	467	consensus Zn finger proteins [General function pre	99.49
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.34
KOG3576	267	consensus Ovo and related transcription factors [T	99.34
PHA00733	128	hypothetical protein	98.82
PHA02768	55	hypothetical protein; Provisional	98.72
PHA02768	55	hypothetical protein; Provisional	98.72
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.62
PLN03086	567	PRLI-interacting factor K; Provisional	98.58
KOG3993	500	consensus Transcription factor (contains Zn finger	98.5
PHA00733	128	hypothetical protein	98.44
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.4
PLN03086	567	PRLI-interacting factor K; Provisional	98.39
PHA00732	79	hypothetical protein	98.35
PHA00616	44	hypothetical protein	98.28
KOG3993	500	consensus Transcription factor (contains Zn finger	98.12
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.99
PHA00616	44	hypothetical protein	97.93
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.82
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.81
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.8
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.53
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.47
PHA00732	79	hypothetical protein	97.46
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.45
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.36
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.35
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.22
smart00355	26	ZnF_C2H2 zinc finger.	97.09
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.81
smart00355	26	ZnF_C2H2 zinc finger.	96.71
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.66
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.57
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.52
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.51
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.47
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.29
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.26
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.32
PRK04860	160	hypothetical protein; Provisional	94.9
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.76
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.25
PRK04860	160	hypothetical protein; Provisional	93.71
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.01
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.78
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.19
KOG2893	341	consensus Zn finger protein [General function pred	92.12
COG5048	467	FOG: Zn-finger [General function prediction only]	91.73
KOG1146	1406	consensus Homeobox protein [General function predi	91.37
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	90.81
COG5048	467	FOG: Zn-finger [General function prediction only]	90.63
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	89.7
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	88.4
KOG1146	1406	consensus Homeobox protein [General function predi	86.07
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	85.73
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	85.0
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	84.63
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	83.6

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.97  E-value=1.9e-31  Score=273.04  Aligned_cols=61  Identities=18%  Similarity=0.164  Sum_probs=57.2

Q ss_pred             CcccccCCCCcccccCccccccccccCCCCCccCCCcCccccchhhhcccccccccCCCCCcc
Q 041528          430 KFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSEDKT  492 (527)
Q Consensus       430 ~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~~~~~~  492 (527)
                      ++.|..|||.|  .....|.+|+++|+|+|||.|.+|+++|.++.+|+.||++|+|.....+.
T Consensus       879 ~h~C~vCgk~F--sSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srr  939 (958)
T KOG1074|consen  879 AHVCNVCGKQF--SSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRR  939 (958)
T ss_pred             hhhhccchhcc--cchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCccC
Confidence            45699999999  89999999999999999999999999999999999999999998887654

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.89  E-value=1.3e-23  Score=215.97  Aligned_cols=55  Identities=22%  Similarity=0.284  Sum_probs=45.6

Q ss_pred             cccCCCCCcc----cccchhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCC
Q 041528           74 GYVLRANPKR----TRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKM  128 (527)
Q Consensus        74 ~~~c~~c~~~----~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~  128 (527)
                      +.+|-+|.+.    ..|.-|.|+|+|||||+|.|||++|.+++||+.||-+|.-+.+..
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R  663 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPAR  663 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCcccc
Confidence            5566666654    355569999999999999999999999999999999998665544

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.86  E-value=3.2e-22  Score=202.00  Aligned_cols=82  Identities=18%  Similarity=0.315  Sum_probs=74.9

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      .++.|.|+.|.|+|...+.|.+|+=-|+|.++                          |.|.+|.|.|  ..+..|.-|+
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRP--------------------------yqC~iCkKAF--KHKHHLtEHk  942 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRP--------------------------YQCIICKKAF--KHKHHLTEHK  942 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCC--------------------------cccchhhHhh--hhhhhhhhhh
Confidence            46899999999999999999999999998553                          4588999999  8999999999


Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccc
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRS  482 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~  482 (527)
                      |.|.|||||.|+.|+|+|..+++.-.||.-
T Consensus       943 RLHSGEKPfQCdKClKRFSHSGSYSQHMNH  972 (1007)
T KOG3623|consen  943 RLHSGEKPFQCDKCLKRFSHSGSYSQHMNH  972 (1007)
T ss_pred             hhccCCCcchhhhhhhhcccccchHhhhcc
Confidence            999999999999999999999999999973

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.83  E-value=1.9e-21  Score=177.76  Aligned_cols=135  Identities=21%  Similarity=0.230  Sum_probs=122.2

Q ss_pred             ccccccCcccccccCCCChhhhcC-----CcccCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcC
Q 041528          346 RASTKHGSRKRAKNDSSSPQIFRN-----NAQKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETD  420 (527)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~  420 (527)
                      .....+.|..|++..++.+.|..|     .....+.+.|++|||.|.+--+|..|+|+|+-.-.|.+|++.|+..=+|.+
T Consensus       126 ~~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  126 AKHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             ccCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhc
Confidence            345577888999998888888776     234578999999999999999999999999987899999999999999999


Q ss_pred             CCCCCCCCCCcccccCCCCcccccCccccccccccCCCCCccCCCcCccccchhhhcccccc
Q 041528          421 SFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRS  482 (527)
Q Consensus       421 ~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~  482 (527)
                      |.+.+.+.++|.|++|+|.|  +.+++|+-|+.+|.+.|+|+|+.|+|.|..++.|.+|...
T Consensus       206 HiRTHTGEKPF~C~hC~kAF--ADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAF--ADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccccccCCCCccCCcccchh--cchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            99999999999999999999  8999999999999999999999999999999999999753

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.82  E-value=2.8e-21  Score=176.63  Aligned_cols=111  Identities=17%  Similarity=0.203  Sum_probs=102.6

Q ss_pred             cCCccccccccccccCccccccccccCCC-----CCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSK-----INGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLST  447 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~-----~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~  447 (527)
                      ....|.|..|||.+.+.++|.+|+.+|-.     -..|+.|++.+.....|+.|..++.  -+..|.+|||.|  +..++
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaF--SRPWL  202 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAF--SRPWL  202 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccc--cchHH
Confidence            45779999999999999999999999983     2399999999999999999988876  466799999999  99999


Q ss_pred             ccccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          448 NVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       448 l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      |+-|.|+|||||||.|+.|+|+|..+++|.-||+||.+..
T Consensus       203 LQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K  242 (279)
T KOG2462|consen  203 LQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVK  242 (279)
T ss_pred             hhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCc
Confidence            9999999999999999999999999999999999999865

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.59  E-value=4.6e-17  Score=152.38  Aligned_cols=80  Identities=25%  Similarity=0.390  Sum_probs=63.9

Q ss_pred             CCccccccccccccCccccccccccCCCCC-CCCc--ccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccc
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHTASHSKIN-GCCE--SINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVD  450 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~-~C~~--c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~  450 (527)
                      .+||+|+.|.+.|...+.|..|..+|.+.. .|..  |.++|                              .++..++.
T Consensus       290 dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~------------------------------r~~~q~~~  339 (467)
T KOG3608|consen  290 DKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSV------------------------------RTYTQMRR  339 (467)
T ss_pred             CCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHH------------------------------HHHHHHHH
Confidence            689999999999999999999999999754 7663  55555                              45555556


Q ss_pred             cccc-cC--CCCCccCCCcCccccchhhhccc-cccc
Q 041528          451 KRLG-SK--KSKGHECPFCFRVFKSGQALGGH-KRSH  483 (527)
Q Consensus       451 h~~~-Ht--~ekp~~C~iC~k~F~~~~~L~~H-~r~H  483 (527)
                      |++- |.  .+-+|+|..|++.|++..+|..| ||.|
T Consensus       340 H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  340 HFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKH  376 (467)
T ss_pred             HHHHhccCCCCCceeeecchhhhccchhHHHHHHHhh
Confidence            6554 42  46789999999999999999999 4456

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.54  E-value=3.2e-16  Score=135.94  Aligned_cols=85  Identities=22%  Similarity=0.354  Sum_probs=76.6

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      ....|.|.+|||.|.....|.+|++.|...+                          ++.|..|||.|  ...-+|++|+
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vk--------------------------r~lct~cgkgf--ndtfdlkrh~  165 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVK--------------------------RHLCTFCGKGF--NDTFDLKRHT  165 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHH--------------------------HHHHhhccCcc--cchhhhhhhh
Confidence            4578999999999999999999999998744                          56688999999  8999999999


Q ss_pred             cccCCCCCccCCCcCccccchhhhccccc-cccc
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKR-SHFV  485 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r-~H~~  485 (527)
                      |+|||.+||+|..|+|+|+++-+|..|++ +|--
T Consensus       166 rthtgvrpykc~~c~kaftqrcsleshl~kvhgv  199 (267)
T KOG3576|consen  166 RTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGV  199 (267)
T ss_pred             ccccCccccchhhhhHHHHhhccHHHHHHHHcCc
Confidence            99999999999999999999999999965 5643

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.49  E-value=1.3e-15  Score=142.77  Aligned_cols=110  Identities=16%  Similarity=0.161  Sum_probs=99.9

Q ss_pred             ccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCC-CCCCCcccccCCCCcccccCccccccccc
Q 041528          376 QFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVP-MPNSKFCKSVNGKTPIAQNLSTNVDKRLG  454 (527)
Q Consensus       376 ~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~-~~~~~~~c~~C~K~f~~~~~~~l~~h~~~  454 (527)
                      +|.|..|-|.|.+...|..|++-|..-++|+.|..+....+.|..|.+.. ....+++|..|.++|  .+.+.|.+|..+
T Consensus       237 ~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c--~~esdL~kH~~~  314 (467)
T KOG3608|consen  237 SFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRC--VRESDLAKHVQV  314 (467)
T ss_pred             chHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhh--ccHHHHHHHHHh
Confidence            58999999999999999999999999999999999999999898887764 367899999999999  899999999999


Q ss_pred             cCCCCCccCCC--cCccccchhhhcccccccccCCC
Q 041528          455 SKKSKGHECPF--CFRVFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       455 Ht~ekp~~C~i--C~k~F~~~~~L~~H~r~H~~~~~  488 (527)
                      |. +..|.|+.  |...|++...|.+|++.|..+.+
T Consensus       315 HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~n  349 (467)
T KOG3608|consen  315 HS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNN  349 (467)
T ss_pred             cc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCC
Confidence            99 88999999  99999999999999998765444

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.34  E-value=1.5e-13  Score=139.98  Aligned_cols=80  Identities=16%  Similarity=0.301  Sum_probs=71.1

Q ss_pred             CCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcccccc
Q 041528            8 KKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRF   87 (527)
Q Consensus         8 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~~   87 (527)
                      +-.|.|++|+|+|...++|-||...|+|.||| +|                        .+|.|.|..       ++.|.
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPy-qC------------------------~iCkKAFKH-------KHHLt  939 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPY-QC------------------------IICKKAFKH-------KHHLT  939 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCc-cc------------------------chhhHhhhh-------hhhhh
Confidence            45899999999999999999999999999999 44                        455566655       45677


Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHh
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMA  119 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~  119 (527)
                      .|+|.|.|+|||+|+-|+|+|.+.+...+||.
T Consensus       940 EHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  940 EHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             hhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            89999999999999999999999999999996

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.34  E-value=1.7e-13  Score=119.12  Aligned_cols=83  Identities=22%  Similarity=0.389  Sum_probs=73.7

Q ss_pred             CCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcccccc
Q 041528            8 KKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRF   87 (527)
Q Consensus         8 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~~   87 (527)
                      ...|.|.+|+|.|.--.-|.+|++.|...+-|                         -|..||+.|.-       .|.|+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~-------------------------lct~cgkgfnd-------tfdlk  162 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRH-------------------------LCTFCGKGFND-------TFDLK  162 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHH-------------------------HHhhccCcccc-------hhhhh
Confidence            45799999999999999999999999776554                         77888888876       57999


Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHH-hhhc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHM-ACHS  122 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~-~~H~  122 (527)
                      +|.|+|+|.+||+|.+|+++|.+.-.|..|. ++|.
T Consensus       163 rh~rthtgvrpykc~~c~kaftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  163 RHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHG  198 (267)
T ss_pred             hhhccccCccccchhhhhHHHHhhccHHHHHHHHcC
Confidence            9999999999999999999999999999999 4554

>PHA00733 hypothetical protein

Probab=98.82  E-value=7.9e-10  Score=93.53  Aligned_cols=85  Identities=9%  Similarity=0.067  Sum_probs=68.4

Q ss_pred             cCCccccccccccccCccccccc--cccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGH--TASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVD  450 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H--~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~  450 (527)
                      ..+++.|.+|++.|.....|..|  ++.|..                       .....+|.|+.||+.|  .....|..
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~-----------------------~~~~kPy~C~~Cgk~F--ss~s~L~~   91 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLT-----------------------SKAVSPYVCPLCLMPF--SSSVSLKQ   91 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcc-----------------------cCCCCCccCCCCCCcC--CCHHHHHH
Confidence            46889999999999999988887  333321                       1123456788999999  88899999


Q ss_pred             cccccCCCCCccCCCcCccccchhhhcccccccc
Q 041528          451 KRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       451 h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~  484 (527)
                      |+++|  +.+|.|++|+++|....+|..|++...
T Consensus        92 H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         92 HIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             HHhcC--CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            99987  468999999999999999999987643

>PHA02768 hypothetical protein; Provisional

Probab=98.72  E-value=2e-09  Score=74.56  Aligned_cols=44  Identities=7%  Similarity=-0.004  Sum_probs=40.1

Q ss_pred             cccccCCCCcccccCccccccccccCCCCCccCCCcCccccchhhhcc
Q 041528          431 FCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGG  478 (527)
Q Consensus       431 ~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~  478 (527)
                      |.|+.|||.|  +....|..|+++|+  +||+|..|+|.|.+++.|..
T Consensus         6 y~C~~CGK~F--s~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          6 YECPICGEIY--IKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             cCcchhCCee--ccHHHHHHHHHhcC--CcccCCcccceecccceeEE
Confidence            5699999999  89999999999999  79999999999998888763

>PHA02768 hypothetical protein; Provisional

Probab=98.72  E-value=3e-09  Score=73.76  Aligned_cols=43  Identities=14%  Similarity=0.277  Sum_probs=35.5

Q ss_pred             ccccccccccccCccccccccccCCCCCCCCcccccccCCCcC
Q 041528          376 QFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRE  418 (527)
Q Consensus       376 ~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~  418 (527)
                      -|+|+.|||.|...++|..||++|+...+|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcCCcccCCcccceeccccee
Confidence            4899999999999999999999999767777666666544433

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.62  E-value=3.6e-09  Score=62.66  Aligned_cols=26  Identities=19%  Similarity=0.393  Sum_probs=23.6

Q ss_pred             cccccccccCCCCCccCCCcCccccc
Q 041528          447 TNVDKRLGSKKSKGHECPFCFRVFKS  472 (527)
Q Consensus       447 ~l~~h~~~Ht~ekp~~C~iC~k~F~~  472 (527)
                      +|..|+++|+|+|||.|++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            36789999999999999999999974

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.58  E-value=1.3e-08  Score=105.46  Aligned_cols=101  Identities=15%  Similarity=0.174  Sum_probs=84.0

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccc---------
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQ---------  443 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~---------  443 (527)
                      .+..+.|+.||+.|. ...|..|+++|+....|+ |++.+ .+..|..|...+++...+.|++|++.|  .         
T Consensus       450 l~~H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v--~~g~~~~d~~  524 (567)
T PLN03086        450 AKNHVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMV--QAGGSAMDVR  524 (567)
T ss_pred             cccCccCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCcc--ccCccccchh
Confidence            346689999999996 688999999988888999 99654 668888888888889999999999999  4         


Q ss_pred             -cCccccccccccCCCCCccCCCcCccccchhhhcccc
Q 041528          444 -NLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHK  480 (527)
Q Consensus       444 -~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~  480 (527)
                       ....|..|+.++ |.+++.|..||+.|..+ -|..|+
T Consensus       525 d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~  560 (567)
T PLN03086        525 DRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQ  560 (567)
T ss_pred             hhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHH
Confidence             235788898886 89999999999998763 456664

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.50  E-value=3.3e-08  Score=95.88  Aligned_cols=113  Identities=20%  Similarity=0.252  Sum_probs=74.8

Q ss_pred             CccccccccccccCccccccccccCCCCC-------------------CCCcccccccCCCcCcCCC-CCCCCCCCcccc
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHTASHSKIN-------------------GCCESINESSENSRETDSF-PVPMPNSKFCKS  434 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~-------------------~C~~c~~~f~~~~~~~~~~-~~~~~~~~~~c~  434 (527)
                      ..|.|.+|||.|.....|+.|+.+|..--                   .|..|.-.+.....+.... -.-.......|.
T Consensus       355 gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp  434 (500)
T KOG3993|consen  355 GIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPP  434 (500)
T ss_pred             ceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCC
Confidence            57999999999999999999999988421                   1111111111111111110 011122344688


Q ss_pred             cCCCCcccccCccccccccccCCCCCccCCCcCccccchhhhccccc-ccccCCCC
Q 041528          435 VNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKR-SHFVGGSE  489 (527)
Q Consensus       435 ~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r-~H~~~~~~  489 (527)
                      +||-.|  +.++.-.-+.+.-..+--|.|.+|--+|.+...|.+|.. .|..+..+
T Consensus       435 ~~~~pp--sss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse~rq  488 (500)
T KOG3993|consen  435 YDGSPP--SSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSELRQ  488 (500)
T ss_pred             CCCCCc--ccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHHhhh
Confidence            999888  666666666655555778999999999999999999965 58776653

>PHA00733 hypothetical protein

Probab=98.44  E-value=8e-08  Score=81.34  Aligned_cols=82  Identities=12%  Similarity=0.087  Sum_probs=59.6

Q ss_pred             CCceecccCCCccCCchhHHHH--hhh---hcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCc
Q 041528            8 KKLFVCKYCNKRYPCGKSLGGH--IRT---HMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPK   82 (527)
Q Consensus         8 ~~~~~C~~C~k~f~~~~~L~~H--~~~---H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~   82 (527)
                      .+++.|.+|.+.|.....|..|  ++.   +.+.+||                         .|..|++.|....     
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy-------------------------~C~~Cgk~Fss~s-----   87 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPY-------------------------VCPLCLMPFSSSV-----   87 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCc-------------------------cCCCCCCcCCCHH-----
Confidence            4678899999888887777766  222   2234454                         6666666665532     


Q ss_pred             ccccchhhhhccCCCccccccccccccChhhHHHHHhhhcC
Q 041528           83 RTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        83 ~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~  123 (527)
                        .|..|++.|  ..+|.|++|++.|.....|..|++..++
T Consensus        88 --~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         88 --SLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             --HHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence              566788776  4579999999999999999999966553

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.40  E-value=8.1e-08  Score=56.86  Aligned_cols=25  Identities=28%  Similarity=0.438  Sum_probs=23.0

Q ss_pred             cchhhhhccCCCccccccccccccC
Q 041528           86 RFVDSNTLTSQQEMVCKECGKVFQS  110 (527)
Q Consensus        86 ~~~H~~~h~~~k~~~C~~Cgk~F~~  110 (527)
                      |..|+++|+|++||+|++|+++|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            5679999999999999999999974

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.39  E-value=2.9e-07  Score=95.62  Aligned_cols=109  Identities=13%  Similarity=0.157  Sum_probs=68.9

Q ss_pred             CCCceecccCCCccCCchhHHHHhhhhcCCCCcccccccccccccc-cccccc--CCcccccccccCCCccccCC---CC
Q 041528            7 KKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNI-DKIFSG--RNIKKDSCFEAGGQSGYVLR---AN   80 (527)
Q Consensus         7 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~-~~~~~~--~~~~~~~c~~c~~~~~~~c~---~c   80 (527)
                      -++.+.|++|++.|. ...|..|+++|+  +|+ .|+ ||+.+... ...|..  -..+++.|..|+..+...-.   .-
T Consensus       450 l~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv-~Cp-Cg~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~  524 (567)
T PLN03086        450 AKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPL-QCP-CGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVR  524 (567)
T ss_pred             cccCccCCCCCCccc-hHHHHHHHHhcC--CCc-cCC-CCCCcchhHHHhhhhccCCCCceeCCCCCCccccCccccchh
Confidence            356789999999996 678999999985  788 999 97533222 112211  11234444444444321000   00


Q ss_pred             CcccccchhhhhccCCCccccccccccccChhhHHHHH-hhhc
Q 041528           81 PKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHM-ACHS  122 (527)
Q Consensus        81 ~~~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~-~~H~  122 (527)
                      .....|..|+..+ |.+++.|..||+.|..+ .|..|+ .+|.
T Consensus       525 d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        525 DRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             hhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence            0011355688886 89999999999998876 778887 5564

>PHA00732 hypothetical protein

Probab=98.35  E-value=1.6e-07  Score=71.81  Aligned_cols=25  Identities=28%  Similarity=0.429  Sum_probs=19.2

Q ss_pred             ccccccccccccCcccccccccc-CC
Q 041528          376 QFKCLTCNKVFHSPRSLWGHTAS-HS  400 (527)
Q Consensus       376 ~~~C~~Cgk~F~~~~~L~~H~~~-H~  400 (527)
                      ||.|.+||+.|.+.++|..|++. |+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~   26 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT   26 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC
Confidence            47788888888888888888774 44

>PHA00616 hypothetical protein

Probab=98.28  E-value=2.3e-07  Score=61.17  Aligned_cols=34  Identities=15%  Similarity=0.259  Sum_probs=31.6

Q ss_pred             ceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528           10 LFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ||+|..||++|...++|.+|++.|++++++ .|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~-~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL-TLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc-ceeE
Confidence            699999999999999999999999999998 6654

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.12  E-value=3e-07  Score=89.38  Aligned_cols=110  Identities=15%  Similarity=0.166  Sum_probs=56.3

Q ss_pred             CccccccccccccCcccccccc--ccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcc--cccCCCCcccccCccccc
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHT--ASHSKINGCCESINESSENSRETDSFPVPMPNSKFC--KSVNGKTPIAQNLSTNVD  450 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~--~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~--c~~C~K~f~~~~~~~l~~  450 (527)
                      +-|.|..|.-.|...-.|.+|.  ||-.-||+|++|.+.|+--..|..|.+-+-+.....  =..=.|.-. ......+-
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~-~~rae~~e  344 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAV-ETRAEVQE  344 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhh-hhhhhhhh
Confidence            4577777777777777777774  555556666666666653333333322211111000  000000000 00000000


Q ss_pred             cccc--cCCCCCccCCCcCccccchhhhccccccccc
Q 041528          451 KRLG--SKKSKGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       451 h~~~--Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      -.+.  -..+--|.|.+|+|.|.+...|+.|+-+|.-
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence            0000  0112369999999999999999999888753

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.99  E-value=9.3e-07  Score=50.83  Aligned_cols=23  Identities=39%  Similarity=0.756  Sum_probs=21.8

Q ss_pred             ccCCCcCccccchhhhccccccc
Q 041528          461 HECPFCFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       461 ~~C~iC~k~F~~~~~L~~H~r~H  483 (527)
                      |+|++|++.|.+...|..||++|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00616 hypothetical protein

Probab=97.93  E-value=4.8e-06  Score=54.97  Aligned_cols=31  Identities=19%  Similarity=0.477  Sum_probs=28.6

Q ss_pred             ccccccccccccChhhHHHHHhhhcCCCCCC
Q 041528           98 EMVCKECGKVFQSLKALCGHMACHSEKDNKM  128 (527)
Q Consensus        98 ~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~  128 (527)
                      ||+|..||+.|...++|..|++.|+++++..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~   31 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLT   31 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccc
Confidence            6999999999999999999999999987653

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.82  E-value=9.9e-06  Score=46.47  Aligned_cols=23  Identities=43%  Similarity=0.687  Sum_probs=21.8

Q ss_pred             cccccccccccChhhHHHHHhhh
Q 041528           99 MVCKECGKVFQSLKALCGHMACH  121 (527)
Q Consensus        99 ~~C~~Cgk~F~~~~~L~~H~~~H  121 (527)
                      |+|++|+++|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999876

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.81  E-value=4e-06  Score=59.54  Aligned_cols=51  Identities=22%  Similarity=0.203  Sum_probs=42.0

Q ss_pred             CcccccCCCCcccccCccccccccccCCC-CCccCCCcCccccchhhhcccccccc
Q 041528          430 KFCKSVNGKTPIAQNLSTNVDKRLGSKKS-KGHECPFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       430 ~~~c~~C~K~f~~~~~~~l~~h~~~Ht~e-kp~~C~iC~k~F~~~~~L~~H~r~H~  484 (527)
                      .|.|++||+.|  ....++.|....|..+ +.+.||||...++.  +|..||+++.
T Consensus         2 ~f~CP~C~~~~--~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~~--~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKGF--SESSLVEHCEDEHRSESKNVVCPICSSRVTD--NLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCcc--CHHHHHHHHHhHCcCCCCCccCCCchhhhhh--HHHHHHHHhc
Confidence            47799999987  7777777778888876 68999999997664  9999988754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.80  E-value=1e-05  Score=75.92  Aligned_cols=66  Identities=27%  Similarity=0.440  Sum_probs=50.1

Q ss_pred             CCcccccc--ccccccCcccccccccc-CCCCC----CCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCc
Q 041528          374 RSQFKCLT--CNKVFHSPRSLWGHTAS-HSKIN----GCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLS  446 (527)
Q Consensus       374 ~~~~~C~~--Cgk~F~~~~~L~~H~~~-H~~~~----~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~  446 (527)
                      .|||+|.+  |.|.|+....|+.||.- |-..+    +-++-...|                                  
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F----------------------------------  392 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF----------------------------------  392 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc----------------------------------
Confidence            49999998  99999999999999864 54333    222222222                                  


Q ss_pred             cccccccccCCCCCccCCCcCccccchhhhccccc
Q 041528          447 TNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKR  481 (527)
Q Consensus       447 ~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r  481 (527)
                              -...|||+|++|+|++...--|+.|.+
T Consensus       393 --------~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         393 --------SAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             --------cccCCceeccccchhhccCccceeccc
Confidence                    134799999999999999999999964

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.53  E-value=2.2e-05  Score=47.02  Aligned_cols=26  Identities=46%  Similarity=0.613  Sum_probs=24.2

Q ss_pred             CccCCCcCccccchhhhccccccccc
Q 041528          460 GHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      ||+|.+|++.|.+...|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            68999999999999999999999864

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.47  E-value=2.5e-05  Score=46.76  Aligned_cols=26  Identities=38%  Similarity=0.687  Sum_probs=24.1

Q ss_pred             ccccccccccccCccccccccccCCC
Q 041528          376 QFKCLTCNKVFHSPRSLWGHTASHSK  401 (527)
Q Consensus       376 ~~~C~~Cgk~F~~~~~L~~H~~~H~~  401 (527)
                      +|.|.+|++.|.+..+|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            58999999999999999999999864

>PHA00732 hypothetical protein

Probab=97.46  E-value=7.4e-05  Score=57.24  Aligned_cols=39  Identities=18%  Similarity=0.221  Sum_probs=32.4

Q ss_pred             ceecccCCCccCCchhHHHHhhh-hcCCCCcccccccccccccc
Q 041528           10 LFVCKYCNKRYPCGKSLGGHIRT-HMNNGNSAEAEGEGEVKLNI   52 (527)
Q Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~~C~~C~~~~~~~   52 (527)
                      ||.|..|++.|.....|.+|++. |.   ++ .|+.|++.|...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~-~C~~CgKsF~~l   40 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LT-KCPVCNKSYRRL   40 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CC-ccCCCCCEeCCh
Confidence            68999999999999999999985 65   46 888887766544

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.45  E-value=3.1e-05  Score=62.89  Aligned_cols=73  Identities=26%  Similarity=0.429  Sum_probs=22.1

Q ss_pred             ccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccccccCC
Q 041528          378 KCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKK  457 (527)
Q Consensus       378 ~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~~Ht~  457 (527)
                      +|.+|+..|.+...|..||...++...-.                              .+.+  .....+..+.+. .-
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~------------------------------~~~l--~~~~~~~~~~~~-~~   47 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPD------------------------------QKYL--VDPNRLLNYLRK-KV   47 (100)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             Ccccccccccccccccccccccccccccc------------------------------cccc--cccccccccccc-cc
Confidence            59999999999999999997766532100                              0000  011111111111 11


Q ss_pred             CCCccCCCcCccccchhhhccccccc
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H  483 (527)
                      ...+.|.+|++.|.+...|..||+.+
T Consensus        48 ~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   48 KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            23799999999999999999999975

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.36  E-value=9.5e-05  Score=69.58  Aligned_cols=70  Identities=23%  Similarity=0.350  Sum_probs=48.3

Q ss_pred             CCceeccc--CCCccCCchhHHHHhhh-hcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCccc
Q 041528            8 KKLFVCKY--CNKRYPCGKSLGGHIRT-HMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRT   84 (527)
Q Consensus         8 ~~~~~C~~--C~k~f~~~~~L~~H~~~-H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~   84 (527)
                      +|||+|++  |+|.|++...|+.|+.- |-..+..                 ...        .-               
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~-----------------~~p--------~p---------------  386 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLH-----------------ENP--------SP---------------  386 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccC-----------------CCC--------Cc---------------
Confidence            59999986  99999999999999743 3222111                 000        00               


Q ss_pred             ccchhhhhccCCCccccccccccccChhhHHHHHh
Q 041528           85 RRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMA  119 (527)
Q Consensus        85 ~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~  119 (527)
                        ..|.-.-...|||.|++|+|+|+....|+-|..
T Consensus       387 --~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         387 --EKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             --cccccccccCCceeccccchhhccCccceeccc
Confidence              011111245789999999999999999999874

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.35  E-value=0.00012  Score=42.14  Aligned_cols=24  Identities=42%  Similarity=0.738  Sum_probs=20.2

Q ss_pred             cccccccccccChhhHHHHHhhhc
Q 041528           99 MVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        99 ~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      |.|++|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998763

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.22  E-value=0.0002  Score=41.26  Aligned_cols=24  Identities=38%  Similarity=0.784  Sum_probs=20.4

Q ss_pred             eecccCCCccCCchhHHHHhhhhc
Q 041528           11 FVCKYCNKRYPCGKSLGGHIRTHM   34 (527)
Q Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~   34 (527)
                      |.|++|++.|.+...|.+|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998874

...

>smart00355 ZnF_C2H2 zinc finger

Probab=97.09  E-value=0.00017  Score=42.32  Aligned_cols=25  Identities=48%  Similarity=0.788  Sum_probs=22.9

Q ss_pred             ccCCCcCccccchhhhccccccccc
Q 041528          461 HECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       461 ~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      |.|+.|+++|.+...|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            6899999999999999999998864

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.81  E-value=0.001  Score=44.98  Aligned_cols=34  Identities=26%  Similarity=0.436  Sum_probs=24.0

Q ss_pred             cCCCccccccccccccChhhHHHHHhhhcCCCCC
Q 041528           94 TSQQEMVCKECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        94 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                      ..+.|-.|++|+..+.+..||++|+..+++.++.
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS--
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccCC
Confidence            3577889999999999999999999888877653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.71  E-value=0.0011  Score=38.77  Aligned_cols=24  Identities=54%  Similarity=0.893  Sum_probs=22.5

Q ss_pred             cccccccccccChhhHHHHHhhhc
Q 041528           99 MVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        99 ~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      |+|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999876

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.66  E-value=0.0014  Score=44.34  Aligned_cols=33  Identities=15%  Similarity=0.266  Sum_probs=24.3

Q ss_pred             cCCCceecccCCCccCCchhHHHHhhhhcCCCC
Q 041528            6 QKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGN   38 (527)
Q Consensus         6 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p   38 (527)
                      ..+.|..|++|+..+....+|++|+.++++.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            357899999999999999999999998888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.57  E-value=0.0015  Score=46.34  Aligned_cols=49  Identities=16%  Similarity=0.272  Sum_probs=34.6

Q ss_pred             ccccccCCCccccCCCCCcccccchhhhh-ccCC-CccccccccccccChhhHHHHHhhhc
Q 041528           64 DSCFEAGGQSGYVLRANPKRTRRFVDSNT-LTSQ-QEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        64 ~~c~~c~~~~~~~c~~c~~~~~~~~H~~~-h~~~-k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      |.|++|++.|..        ..|..|... |..+ +.+.|++|...+.  .+|..|++.++
T Consensus         3 f~CP~C~~~~~~--------~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGKGFSE--------SSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCCccCH--------HHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            566777664432        256678665 6654 5799999999766  49999997764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.52  E-value=0.00082  Score=40.05  Aligned_cols=23  Identities=39%  Similarity=0.654  Sum_probs=21.5

Q ss_pred             cccccccccccCccccccccccC
Q 041528          377 FKCLTCNKVFHSPRSLWGHTASH  399 (527)
Q Consensus       377 ~~C~~Cgk~F~~~~~L~~H~~~H  399 (527)
                      |.|.+|++.|.+...|..|++++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999999873

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.51  E-value=0.00052  Score=40.06  Aligned_cols=23  Identities=35%  Similarity=0.621  Sum_probs=21.4

Q ss_pred             ccCCCcCccccchhhhccccccc
Q 041528          461 HECPFCFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       461 ~~C~iC~k~F~~~~~L~~H~r~H  483 (527)
                      |.|++|++.|.+...|+.|++.|
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999999875

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.47  E-value=0.00045  Score=40.32  Aligned_cols=23  Identities=48%  Similarity=0.704  Sum_probs=21.5

Q ss_pred             cccccccccccCccccccccccC
Q 041528          377 FKCLTCNKVFHSPRSLWGHTASH  399 (527)
Q Consensus       377 ~~C~~Cgk~F~~~~~L~~H~~~H  399 (527)
                      |.|++|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999875

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.29  E-value=0.0019  Score=38.46  Aligned_cols=23  Identities=30%  Similarity=0.512  Sum_probs=21.3

Q ss_pred             ccCCCcCccccchhhhccccccc
Q 041528          461 HECPFCFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       461 ~~C~iC~k~F~~~~~L~~H~r~H  483 (527)
                      |-|.+|++.|.+...|..||+.+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999999863

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.26  E-value=0.0025  Score=51.47  Aligned_cols=73  Identities=19%  Similarity=0.367  Sum_probs=22.3

Q ss_pred             ecccCCCccCCchhHHHHhhhhcCC-CCccccccccccccccccccccCCcccccccccCCCccccCCCCCcccccchhh
Q 041528           12 VCKYCNKRYPCGKSLGGHIRTHMNN-GNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRFVDS   90 (527)
Q Consensus        12 ~C~~C~k~f~~~~~L~~H~~~H~~~-~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~~~H~   90 (527)
                      +|.+|+..|.....|..|+...++- .+-  ..                     ....-.              .+..+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~--~~---------------------~l~~~~--------------~~~~~~   43 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPD--QK---------------------YLVDPN--------------RLLNYL   43 (100)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             Ccccccccccccccccccccccccccccc--cc---------------------cccccc--------------cccccc
Confidence            5999999999999999999754332 110  00                     000000              111111


Q ss_pred             hhccCCCccccccccccccChhhHHHHHhhhc
Q 041528           91 NTLTSQQEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        91 ~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      +. .....+.|.+|++.|.....|..||+.+.
T Consensus        44 ~~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   44 RK-KVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             cc-ccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            11 11226899999999999999999998654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.32  E-value=0.011  Score=33.94  Aligned_cols=23  Identities=22%  Similarity=0.379  Sum_probs=18.9

Q ss_pred             cccccccccccChhhHHHHHhhhc
Q 041528           99 MVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        99 ~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      |+|+.|..+.. ...|.+|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999999998 999999998865

>PRK04860 hypothetical protein; Provisional

Probab=94.90  E-value=0.0079  Score=52.92  Aligned_cols=23  Identities=13%  Similarity=0.397  Sum_probs=18.1

Q ss_pred             CccccccccccccCccccccccccCCC
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHTASHSK  401 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~~~H~~  401 (527)
                      -+|.|. |++   ....+.+|.++|++
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g  140 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRG  140 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcC
Confidence            469998 988   77777888877776

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.76  E-value=0.018  Score=33.04  Aligned_cols=24  Identities=21%  Similarity=0.523  Sum_probs=19.2

Q ss_pred             eecccCCCccCCchhHHHHhhhhcC
Q 041528           11 FVCKYCNKRYPCGKSLGGHIRTHMN   35 (527)
Q Consensus        11 ~~C~~C~k~f~~~~~L~~H~~~H~~   35 (527)
                      |+|..|+...+ ...|.+|++.|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            78999999988 8999999998653

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.25  E-value=0.015  Score=33.75  Aligned_cols=21  Identities=33%  Similarity=0.694  Sum_probs=17.5

Q ss_pred             ccCCCcCccccchhhhcccccc
Q 041528          461 HECPFCFRVFKSGQALGGHKRS  482 (527)
Q Consensus       461 ~~C~iC~k~F~~~~~L~~H~r~  482 (527)
                      ..|++||+.| ...+|.+|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4699999999 77889999764

>PRK04860 hypothetical protein; Provisional

Probab=93.71  E-value=0.03  Score=49.34  Aligned_cols=42  Identities=12%  Similarity=0.229  Sum_probs=31.7

Q ss_pred             CCCccccCCCCCcc-cccchhhhhccCCCccccccccccccChh
Q 041528           70 GGQSGYVLRANPKR-TRRFVDSNTLTSQQEMVCKECGKVFQSLK  112 (527)
Q Consensus        70 ~~~~~~~c~~c~~~-~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~  112 (527)
                      ++.|+|.|. |+.. ..+..|.++|+++++|.|..|+..|....
T Consensus       115 ~~~~~Y~C~-C~~~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        115 GKTFPYRCK-CQEHQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             cCEEEEEcC-CCCeeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            345677776 7642 23456999999999999999999987653

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.01  E-value=0.027  Score=35.70  Aligned_cols=24  Identities=29%  Similarity=0.490  Sum_probs=21.6

Q ss_pred             CccccccccccccCcccccccccc
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHTAS  398 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~~~  398 (527)
                      .+|.|++|++.|.+..+|..|++.
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHCh
Confidence            468899999999999999999865

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.78  E-value=0.04  Score=34.87  Aligned_cols=23  Identities=22%  Similarity=0.546  Sum_probs=21.0

Q ss_pred             CccCCCcCccccchhhhcccccc
Q 041528          460 GHECPFCFRVFKSGQALGGHKRS  482 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~r~  482 (527)
                      +|.|++|++.|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999999875

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.19  E-value=0.11  Score=30.25  Aligned_cols=21  Identities=29%  Similarity=0.556  Sum_probs=17.4

Q ss_pred             cccccccccccChhhHHHHHhh
Q 041528           99 MVCKECGKVFQSLKALCGHMAC  120 (527)
Q Consensus        99 ~~C~~Cgk~F~~~~~L~~H~~~  120 (527)
                      ..|++||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3699999999 67788999864

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=92.12  E-value=0.04  Score=50.11  Aligned_cols=47  Identities=19%  Similarity=0.243  Sum_probs=37.8

Q ss_pred             cccCCCCcccccCccccccccccCCCCCccCCCcCccccchhhhccc-cccccc
Q 041528          433 KSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGH-KRSHFV  485 (527)
Q Consensus       433 c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H-~r~H~~  485 (527)
                      |=+|+.-|  ....    ....|.+.|-|+|.||.|..-+.-.|..| |..|..
T Consensus        13 cwycnref--ddek----iliqhqkakhfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   13 CWYCNREF--DDEK----ILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             eeeccccc--chhh----hhhhhhhhccceeeeehhhhccCCCceeehhhhhhh
Confidence            67888888  4443    44455667999999999999999999999 888864

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.73  E-value=0.12  Score=53.74  Aligned_cols=58  Identities=17%  Similarity=0.153  Sum_probs=51.6

Q ss_pred             CCcccccCCCCcccccCcccccccc--ccCCC--CCccCC--CcCccccchhhhcccccccccCCC
Q 041528          429 SKFCKSVNGKTPIAQNLSTNVDKRL--GSKKS--KGHECP--FCFRVFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       429 ~~~~c~~C~K~f~~~~~~~l~~h~~--~Ht~e--kp~~C~--iC~k~F~~~~~L~~H~r~H~~~~~  488 (527)
                      ..+.|..|...|  .....+..|.+  .|+++  +||.|+  .|++.|.+...|.+|..+|++-..
T Consensus       288 ~~~~~~~~~~~~--s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  351 (467)
T COG5048         288 LPIKSKQCNISF--SRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP  351 (467)
T ss_pred             cCCCCccccCCc--cccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCc
Confidence            356678899999  89999999999  89999  999999  899999999999999999987553

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=91.37  E-value=0.082  Score=59.88  Aligned_cols=79  Identities=22%  Similarity=0.219  Sum_probs=53.2

Q ss_pred             CccccccccccccCcccccccccc-CCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccccc
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHTAS-HSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRL  453 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~~~-H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~  453 (527)
                      +.|.|..|+..|+....|..|||+ |..... -.|...                               ++.-.+..-..
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~-~~c~~g-------------------------------q~~~~~arg~~  511 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQS-AYCKAG-------------------------------QNHPRLARGEV  511 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccch-hHhHhc-------------------------------ccccccccccc
Confidence            889999999999999999999998 433221 111111                               11111111111


Q ss_pred             ccCCCCCccCCCcCccccchhhhcccccc--ccc
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRS--HFV  485 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~--H~~  485 (527)
                      .--+-+||.|..|...|+++.+|-+||..  |..
T Consensus       512 ~~~~~~p~~C~~C~~stttng~LsihlqS~~h~~  545 (1406)
T KOG1146|consen  512 YRCPGKPYPCRACNYSTTTNGNLSIHLQSDLHRN  545 (1406)
T ss_pred             ccCCCCcccceeeeeeeecchHHHHHHHHHhhHH
Confidence            22346899999999999999999999874  543

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=90.81  E-value=0.045  Score=58.39  Aligned_cols=98  Identities=17%  Similarity=0.144  Sum_probs=50.7

Q ss_pred             cccccccccCccccccccccCCCCCCCCccccc---cc----------CCCcCcCCCCCC-CCCCCcccccCCCCccccc
Q 041528          379 CLTCNKVFHSPRSLWGHTASHSKINGCCESINE---SS----------ENSRETDSFPVP-MPNSKFCKSVNGKTPIAQN  444 (527)
Q Consensus       379 C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~---f~----------~~~~~~~~~~~~-~~~~~~~c~~C~K~f~~~~  444 (527)
                      |..| -.|.+...|+.||+.=++...|..|...   |.          ...++..-.+.. ....--.|..|...|  -.
T Consensus       118 ~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~f--ld  194 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERF--LD  194 (669)
T ss_pred             Cccc-cchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhh--cc
Confidence            3333 3344888999999554434445544332   21          011111111210 111123477777777  45


Q ss_pred             CccccccccccCCCCCccCCCcC------ccccchhhhccccccc
Q 041528          445 LSTNVDKRLGSKKSKGHECPFCF------RVFKSGQALGGHKRSH  483 (527)
Q Consensus       445 ~~~l~~h~~~Ht~ekp~~C~iC~------k~F~~~~~L~~H~r~H  483 (527)
                      ...|.+|++.    .-|.|.+|.      --|....-|..|.|.+
T Consensus       195 ~~el~rH~~~----~h~~chfC~~~~~~neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  195 DDELYRHLRF----DHEFCHFCDYKTGQNEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             HHHHHHhhcc----ceeheeecCcccccchhcccchHHHHHhhhc
Confidence            5556666553    236677773      4456777788887664

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.63  E-value=0.41  Score=49.59  Aligned_cols=51  Identities=16%  Similarity=0.062  Sum_probs=37.6

Q ss_pred             CCCCcccccCccccccccccCCCC--CccCCCcCccccchhhhcccccccccCCC
Q 041528          436 NGKTPIAQNLSTNVDKRLGSKKSK--GHECPFCFRVFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       436 C~K~f~~~~~~~l~~h~~~Ht~ek--p~~C~iC~k~F~~~~~L~~H~r~H~~~~~  488 (527)
                      |...+  .....+..|...|....  .+.+..|.+.|.....|..|++.|.....
T Consensus       394 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (467)
T COG5048         394 CIRNF--KRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAP  446 (467)
T ss_pred             hhhhh--ccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCc
Confidence            44444  56666666666666555  77889999999999999999999876543

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=89.70  E-value=0.31  Score=39.79  Aligned_cols=32  Identities=19%  Similarity=0.152  Sum_probs=25.4

Q ss_pred             CCcccccCCCCcccccCccccccccccCCCCCccCCCcCccccch
Q 041528          429 SKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSG  473 (527)
Q Consensus       429 ~~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~  473 (527)
                      ....|+.||++|             -=.+..|-.|+.||..|.-.
T Consensus         8 tKR~Cp~CG~kF-------------YDLnk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    8 TKRTCPSCGAKF-------------YDLNKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             CcccCCCCcchh-------------ccCCCCCccCCCCCCccCcc
Confidence            345699999999             23445789999999999876

The function of members of this family is unknown.

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=88.40  E-value=0.31  Score=34.45  Aligned_cols=34  Identities=24%  Similarity=0.353  Sum_probs=24.5

Q ss_pred             cccccccccCCCccccCCCCCcccccchhhhhccCCCccccccccc
Q 041528           61 IKKDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGK  106 (527)
Q Consensus        61 ~~~~~c~~c~~~~~~~c~~c~~~~~~~~H~~~h~~~k~~~C~~Cgk  106 (527)
                      ...|.|..||....+.|..|.+..            .+|.|+.||.
T Consensus        23 ~~~F~CPnCG~~~I~RC~~CRk~~------------~~Y~CP~CGF   56 (59)
T PRK14890         23 AVKFLCPNCGEVIIYRCEKCRKQS------------NPYTCPKCGF   56 (59)
T ss_pred             cCEeeCCCCCCeeEeechhHHhcC------------CceECCCCCC
Confidence            456788888877677777775333            3799999985

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=86.07  E-value=0.13  Score=58.29  Aligned_cols=93  Identities=13%  Similarity=0.081  Sum_probs=56.2

Q ss_pred             CCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccccc
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRL  453 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~  453 (527)
                      .+.+.|..|.+.|...-.+. |+-+-. .+.|..|...|.-.+.+..|.           ..|.+.|  ......--+.+
T Consensus      1258 sGe~~c~~~~~~~~~~~~~~-~l~~~~-~~~~~~~~~~~~~~~~l~~~~-----------~k~~~~~--~~~~~~~~~~l 1322 (1406)
T KOG1146|consen 1258 SGEGECGAVDELLTPSFGIS-TLDVTH-RYLCRQCKMAFDGEAPLTAHQ-----------RKFCFAG--RGSGGSMPPPL 1322 (1406)
T ss_pred             CCcchhhhccccccCcccee-ecccch-hHHHHHHHhhhcchhHHHHHH-----------HHHHhcc--CccccCCCCcc
Confidence            34555555555555555555 432211 134555555554444443332           1223333  44445555677


Q ss_pred             ccCCCCCccCCCcCccccchhhhcccccc
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRS  482 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~  482 (527)
                      .|...++| |.+|...|.....|..|||+
T Consensus      1323 ~~~d~~~~-c~~c~~~~~~~~alqihm~~ 1350 (1406)
T KOG1146|consen 1323 RVPDCTYH-CLACEVLLSGREALQIHMRS 1350 (1406)
T ss_pred             cCcccccc-chHHHhhcchhHHHHHHHHH
Confidence            77778889 99999999999999999997

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=85.73  E-value=0.75  Score=38.15  Aligned_cols=36  Identities=17%  Similarity=0.110  Sum_probs=28.1

Q ss_pred             CCcccccCCCCcccccCccccccccccCCCCCccCCCcCccccchhhhc
Q 041528          429 SKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALG  477 (527)
Q Consensus       429 ~~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~  477 (527)
                      .+..|+.||++|             .-.+..|-.|+.||..|.-...++
T Consensus         8 tKr~Cp~cg~kF-------------YDLnk~p~vcP~cg~~~~~~~~~~   43 (129)
T TIGR02300         8 TKRICPNTGSKF-------------YDLNRRPAVSPYTGEQFPPEEALK   43 (129)
T ss_pred             ccccCCCcCccc-------------cccCCCCccCCCcCCccCcchhhc
Confidence            445699999999             244568999999999997765555

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=85.00  E-value=0.46  Score=50.94  Aligned_cols=101  Identities=12%  Similarity=0.112  Sum_probs=53.2

Q ss_pred             CccCCchhHHHHhh-hhcCCCCcccccccccc---ccccccccccCCccccccc--ccCCCc--cccCCCCCcccccchh
Q 041528           18 KRYPCGKSLGGHIR-THMNNGNSAEAEGEGEV---KLNIDKIFSGRNIKKDSCF--EAGGQS--GYVLRANPKRTRRFVD   89 (527)
Q Consensus        18 k~f~~~~~L~~H~~-~H~~~~p~~~C~~C~~~---~~~~~~~~~~~~~~~~~c~--~c~~~~--~~~c~~c~~~~~~~~H   89 (527)
                      -.|..-..|++|++ .|.   .+ .|.+|...   |....+.|+...+..+.-.  .++..+  --.|..|...|.-..-
T Consensus       122 ~~~~s~~~Lk~H~~~~H~---~~-~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~e  197 (669)
T KOG2231|consen  122 TEFKSVENLKNHMRDQHK---LH-LCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDE  197 (669)
T ss_pred             cchhHHHHHHHHHHHhhh---hh-ccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHH
Confidence            33346778999995 563   34 88888542   2222444443322111111  012222  1245555544433333


Q ss_pred             hhhccCCCccccccc------cccccChhhHHHHHhhhc
Q 041528           90 SNTLTSQQEMVCKEC------GKVFQSLKALCGHMACHS  122 (527)
Q Consensus        90 ~~~h~~~k~~~C~~C------gk~F~~~~~L~~H~~~H~  122 (527)
                      +..|....-|.|.+|      +.-|.....|..|.|.++
T Consensus       198 l~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  198 LYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             HHHhhccceeheeecCcccccchhcccchHHHHHhhhcC
Confidence            333444445677777      355777788888887766

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=84.63  E-value=0.42  Score=33.72  Aligned_cols=38  Identities=24%  Similarity=0.344  Sum_probs=26.3

Q ss_pred             ccCCcccccccccCCCccccCCCCCcccccchhhhhccCCCccccccccc
Q 041528           57 SGRNIKKDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGK  106 (527)
Q Consensus        57 ~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~~~H~~~h~~~k~~~C~~Cgk  106 (527)
                      .+.....|.|..||....+.|..|.+.            ..+|.|+-||.
T Consensus        21 p~e~~v~F~CPnCGe~~I~Rc~~CRk~------------g~~Y~Cp~CGF   58 (61)
T COG2888          21 PGETAVKFPCPNCGEVEIYRCAKCRKL------------GNPYRCPKCGF   58 (61)
T ss_pred             cCCceeEeeCCCCCceeeehhhhHHHc------------CCceECCCcCc
Confidence            334445678888888888888766522            23899999984

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=83.60  E-value=0.76  Score=28.65  Aligned_cols=25  Identities=20%  Similarity=0.268  Sum_probs=17.9

Q ss_pred             cccccCCCCcccccCccccccccccCCCCCccCCCcCcc
Q 041528          431 FCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRV  469 (527)
Q Consensus       431 ~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~  469 (527)
                      |.|..||-.+.              ..+.++.|++||..
T Consensus         2 ~~C~~CGy~y~--------------~~~~~~~CP~Cg~~   26 (33)
T cd00350           2 YVCPVCGYIYD--------------GEEAPWVCPVCGAP   26 (33)
T ss_pred             EECCCCCCEEC--------------CCcCCCcCcCCCCc
Confidence            56788887762              22379999999863

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	527
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	1e-06
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	5e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	7e-04

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 458 SKGHECPFCFRVFKSGQALGGHKRSH 483
            + + C FC R F+S QALGGH   H
Sbjct: 4   PRSYTCSFCKREFRSAQALGGHMNVH 29

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query: 9  KLFVCKYCNKRYPCGKSLGGHIRTH 33
          + + C +C + +   ++LGGH+  H
Sbjct: 5  RSYTCSFCKREFRSAQALGGHMNVH 29

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 41.8 bits (97), Expect = 7e-04
 Identities = 20/169 (11%), Positives = 45/169 (26%), Gaps = 6/169 (3%)

Query: 322 EKSSNKRTEFGKHLTKEEDFALVDRAST-KHGSRKRAKNDSSSPQIFRNNAQKRSQFKCL 380
           E  ++ R ++             + A      + +   +   + +    N    ++ +  
Sbjct: 44  EPGTSNREQYRARPGIASVQRATESAELPMKNNDEGTPDKKGNTRGDLVNEHSEAKDEAD 103

Query: 381 TCNKVFHSPRSLWGHTASHSKINGCCESINESSENSR-ETDSFPVPMPNSKFCKSVNGKT 439
              +            A  +  +    + NE S +   + +      P S          
Sbjct: 104 EATQKQAKDTD--KSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAI 161

Query: 440 PIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGS 488
                    +          G++C  C  V  S   L  H  SH + G+
Sbjct: 162 VSKHPARVGLPPTAS--SGHGYQCHVCSAVLFSPLDLDAHVASHGLHGN 208

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	527
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.9
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.9
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.84
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.8
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.79
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.77
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.77
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.76
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.75
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.75
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.74
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.73
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.71
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.7
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.69
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.69
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.69
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.68
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.68
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.66
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.65
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.64
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.63
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.63
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.62
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.62
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.6
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.55
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.53
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.48
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.47
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.46
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.45
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.45
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.44
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.43
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.42
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.42
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.42
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.41
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.41
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.4
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.4
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.4
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.4
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.36
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.34
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.32
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.32
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.31
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.31
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.31
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.31
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.31
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.31
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.31
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.3
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.3
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.29
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.29
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.27
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.26
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.26
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.22
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.17
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.12
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.1
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.1
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.1
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.03
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.01
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.0
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.0
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.98
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.97
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.97
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.97
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.95
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.94
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.94
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.93
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.93
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.93
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.93
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.91
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.91
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.91
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.91
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.91
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.9
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.9
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.9
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.87
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.85
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.85
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.85
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.84
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.84
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.84
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.84
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.84
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.83
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.83
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.83
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.83
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.82
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.81
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.8
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.8
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.79
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.76
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.75
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.72
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.7
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.68
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.68
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.66
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.66
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.66
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.65
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.65
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.63
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.62
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.6
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.59
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.57
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.53
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.49
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.49
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.48
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.47
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.47
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.47
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.47
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.46
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.44
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.43
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.42
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.42
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.42
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.41
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.41
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.4
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.77
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.39
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.39
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.75
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.74
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.38
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.38
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.37
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.37
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.35
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.29
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.61
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.26
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.26
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.26
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.25
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.25
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.24
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.24
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.24
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.53
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.21
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.19
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.49
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.17
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.17
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.16
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.15
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.15
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.15
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.11
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.07
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.86
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.04
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.59
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.44
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.26
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.55
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.18
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.17
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	90.89
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.67
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	88.93
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	83.79
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	83.24
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.86

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=1.3e-32  Score=253.10  Aligned_cols=85  Identities=22%  Similarity=0.337  Sum_probs=75.3

Q ss_pred             CccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccccc
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLG  454 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~~  454 (527)
                      ++|.|.+|++.|.+...|..|+++|+++++                          |.|++||+.|  .....|..|+++
T Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------~~C~~C~~~f--~~~~~L~~H~~~  155 (190)
T 2i13_A          104 KPYACPECGKSFSQLAHLRAHQRTHTGEKP--------------------------YKCPECGKSF--SREDNLHTHQRT  155 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHCCCC--------------------------EECTTTCCEE--SCHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhCCCCC--------------------------eECCCCCccc--CCHHHHHHHHHh
Confidence            458899999999999999999999998653                          4588999999  899999999999


Q ss_pred             cCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          455 SKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       455 Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      |++++||.|++|+++|.+...|..|+++|+++.
T Consensus       156 H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          156 HTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             HHCCCCEECTTTCCEESSHHHHHHHHTTC----
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHhcCCCC
Confidence            999999999999999999999999999999864

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=2.1e-27  Score=218.05  Aligned_cols=81  Identities=19%  Similarity=0.100  Sum_probs=72.7

Q ss_pred             Ccccc--ccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCccccc--CCCCcccccCccccc
Q 041528          375 SQFKC--LTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSV--NGKTPIAQNLSTNVD  450 (527)
Q Consensus       375 ~~~~C--~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~--C~K~f~~~~~~~l~~  450 (527)
                      ++|.|  .+||+.|.+.+.|..|+++|+++++                          |.|++  ||+.|  .....|..
T Consensus       103 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~--------------------------~~C~~~~C~k~F--~~~~~L~~  154 (190)
T 1tf6_A          103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP--------------------------YECPHEGCDKRF--SLPSRLKR  154 (190)
T ss_dssp             SCCEECSSSSCEECSSHHHHHHHHGGGSSSCS--------------------------SBCCSSSCCCBC--SSHHHHHH
T ss_pred             ceeeCCCCCCccccCCHHHHHHHHHHhCCCCC--------------------------ccCCCCCCCchh--cCHHHHHH
Confidence            45889  9999999999999999999998653                          44767  99999  89999999


Q ss_pred             cccccCCCCCccCCC---cCccccchhhhcccccccccC
Q 041528          451 KRLGSKKSKGHECPF---CFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       451 h~~~Ht~ekp~~C~i---C~k~F~~~~~L~~H~r~H~~~  486 (527)
                      |+++|+|   |.|++   |++.|.+...|..|+++|+++
T Consensus       155 H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          155 HEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            9999999   99999   999999999999999999874

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.90  E-value=1e-25  Score=206.77  Aligned_cols=60  Identities=18%  Similarity=0.252  Sum_probs=48.7

Q ss_pred             CCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccccc
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRL  453 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~  453 (527)
                      +++|.|.+||+.|.+.+.|..|+++|+++++                          |.|++||+.|  .....|+.|++
T Consensus       131 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~--------------------------~~C~~C~~~f--~~~~~L~~H~~  182 (190)
T 2i13_A          131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKP--------------------------YKCPECGKSF--SRRDALNVHQR  182 (190)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC--------------------------EECTTTCCEE--SSHHHHHHHHT
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHhcCCCCC--------------------------eECCCCCCcc--CCHHHHHHHHH
Confidence            4679999999999999999999999998653                          4588999999  89999999999


Q ss_pred             ccCCCCCc
Q 041528          454 GSKKSKGH  461 (527)
Q Consensus       454 ~Ht~ekp~  461 (527)
                      +|+|++||
T Consensus       183 ~H~~~k~~  190 (190)
T 2i13_A          183 THTGKKTS  190 (190)
T ss_dssp             TC------
T ss_pred             hcCCCCCC
Confidence            99999997

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=9.7e-25  Score=193.28  Aligned_cols=88  Identities=17%  Similarity=0.203  Sum_probs=74.3

Q ss_pred             CCceecccCCCccCCchhHHHHhh---hhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCccc
Q 041528            8 KKLFVCKYCNKRYPCGKSLGGHIR---THMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRT   84 (527)
Q Consensus         8 ~~~~~C~~C~k~f~~~~~L~~H~~---~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~   84 (527)
                      +.+|.|+.|++.|.+...|.+|++   +|.++++| .|+.|                   .|..|++.|...       .
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~-~C~~c-------------------~C~~c~~~f~~~-------~   53 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEF-VCHWG-------------------GCSRELRPFKAQ-------Y   53 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCC-CCCBT-------------------TCTTTTCCCSSH-------H
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcce-eCCCC-------------------CccchhhhhhhH-------H
Confidence            468999999999999999999998   78889999 88887                   577777777653       3


Q ss_pred             ccchhhhhccCCCcccccc--ccccccChhhHHHHHhhhc
Q 041528           85 RRFVDSNTLTSQQEMVCKE--CGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        85 ~~~~H~~~h~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~  122 (527)
                      .|..|+++|.++++|.|++  |+++|.+...|..|+++|.
T Consensus        54 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (155)
T 2gli_A           54 MLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT   93 (155)
T ss_dssp             HHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcC
Confidence            6777888888888888885  8888888888888888776

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.84  E-value=4.8e-22  Score=182.26  Aligned_cols=83  Identities=22%  Similarity=0.348  Sum_probs=73.7

Q ss_pred             Cccccc--cccccccCcccccccc-ccCC-CCCCCCcccccccCCCcCcCCCCCCCCCCCccc--ccCCCCcccccCccc
Q 041528          375 SQFKCL--TCNKVFHSPRSLWGHT-ASHS-KINGCCESINESSENSRETDSFPVPMPNSKFCK--SVNGKTPIAQNLSTN  448 (527)
Q Consensus       375 ~~~~C~--~Cgk~F~~~~~L~~H~-~~H~-~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c--~~C~K~f~~~~~~~l  448 (527)
                      ++|.|.  +|++.|.+...|..|+ +.|. ++                          ..|.|  +.||+.|  .....|
T Consensus        71 ~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~--------------------------~~~~C~~~~C~k~f--~~~~~L  122 (190)
T 1tf6_A           71 KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKI--------------------------CVYVCHFENCGKAF--KKHNQL  122 (190)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHTTSSTTT--------------------------SCCEECSSSSCEEC--SSHHHH
T ss_pred             CceeCCCCCCCCccCCHHHHHHHHHHhcCCCc--------------------------ceeeCCCCCCcccc--CCHHHH
Confidence            458899  8999999999999999 6774 32                          23557  7899999  899999


Q ss_pred             cccccccCCCCCccCCC--cCccccchhhhccccccccc
Q 041528          449 VDKRLGSKKSKGHECPF--CFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       449 ~~h~~~Ht~ekp~~C~i--C~k~F~~~~~L~~H~r~H~~  485 (527)
                      ..|+++|++++||.|++  |+++|.+...|..|+++|++
T Consensus       123 ~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            99999999999999988  99999999999999999987

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.80  E-value=1.2e-20  Score=161.80  Aligned_cols=95  Identities=20%  Similarity=0.351  Sum_probs=84.1

Q ss_pred             cccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCC
Q 041528            2 EAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANP   81 (527)
Q Consensus         2 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~   81 (527)
                      +++|+|+++|+|++|++.|.....|.+|+++|++++||                         .|.+|++.|...     
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~-------------------------~C~~C~k~F~~~-----   63 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKY-------------------------PCRYCEKVFPLA-----   63 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCE-------------------------ECSSSSCEESSH-----
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCe-------------------------eCCccCeecccc-----
Confidence            45899999999999999999999999999999999998                         555566666553     


Q ss_pred             cccccchhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCC
Q 041528           82 KRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKM  128 (527)
Q Consensus        82 ~~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~  128 (527)
                        ..|..|+++|++++||.|++||++|.+...|..|+++|+++.+..
T Consensus        64 --~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~  108 (133)
T 2lt7_A           64 --EYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSG  108 (133)
T ss_dssp             --HHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTS
T ss_pred             --cchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCC
Confidence              367889999999999999999999999999999999999877654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=2.5e-21  Score=164.23  Aligned_cols=113  Identities=19%  Similarity=0.144  Sum_probs=101.5

Q ss_pred             cCCccccccccccccCccccccccccCCCCC--CCCcccccccCCCcCcCCCC---CCCCCCCcccccCCCCcccccCcc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKIN--GCCESINESSENSRETDSFP---VPMPNSKFCKSVNGKTPIAQNLST  447 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~--~C~~c~~~f~~~~~~~~~~~---~~~~~~~~~c~~C~K~f~~~~~~~  447 (527)
                      ++++|.|.+|++.|.+...|..|+++|.+++  .|+.|++.|.....|..|..   .......|.|++|++.|  .....
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f--~~~~~   81 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETF--RRRME   81 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEE--SSHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCcc--CCHHH
Confidence            5688999999999999999999999999765  99999999998888877755   24566789999999999  89999


Q ss_pred             ccccccccCCCCCccCCCcCccccchhhhccccc-ccccCC
Q 041528          448 NVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKR-SHFVGG  487 (527)
Q Consensus       448 l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r-~H~~~~  487 (527)
                      |..|+++|++++||.|++|++.|.+...|..|++ .|.++.
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            9999999999999999999999999999999997 577654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.77  E-value=5e-21  Score=164.11  Aligned_cols=88  Identities=17%  Similarity=0.223  Sum_probs=81.1

Q ss_pred             ccCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccc
Q 041528          372 QKRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDK  451 (527)
Q Consensus       372 ~~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h  451 (527)
                      .++++|.|++||+.|.+.+.|..|+++|+++++                          |.|++||+.|  .....|..|
T Consensus        18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~--------------------------~~C~~C~k~F--~~~~~L~~H   69 (133)
T 2lt7_A           18 DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKK--------------------------YPCRYCEKVF--PLAEYRTKH   69 (133)
T ss_dssp             TTEEEEEETTTCCEESCHHHHHHHHHHHHCCSC--------------------------EECSSSSCEE--SSHHHHHHH
T ss_pred             CCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCC--------------------------eeCCccCeec--ccccchhhh
Confidence            478999999999999999999999999998764                          4488999999  899999999


Q ss_pred             ccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          452 RLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       452 ~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +++|+|++||.|++||++|.+...|..|+++|+++.
T Consensus        70 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           70 EIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQD  105 (133)
T ss_dssp             HHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCC
T ss_pred             ccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCC
Confidence            999999999999999999999999999999998764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.77  E-value=4.4e-19  Score=156.73  Aligned_cols=95  Identities=17%  Similarity=0.245  Sum_probs=59.4

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhh-hcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCc
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRT-HMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPK   82 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~   82 (527)
                      ++..+.+|.|..|++.|.+...|.+|+++ |.++.+. ....|                ..|.|.+|++.|...      
T Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~-~~~~~----------------~~~~C~~C~~~f~~~------   75 (155)
T 2rpc_A           19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ-NNHVC----------------YWEECPREGKSFKAK------   75 (155)
T ss_dssp             CCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTC-SSCCC----------------CBTTCTTSSCCCSSH------
T ss_pred             echhhcccccccCCcccCCHHHHHHHHHhhcCCCccc-CCccc----------------cccCCCCcccccCCH------
Confidence            34567899999999999999999999997 7776554 22222                123444444444331      


Q ss_pred             ccccchhhhhccCCCcccccc--ccccccChhhHHHHHhhhc
Q 041528           83 RTRRFVDSNTLTSQQEMVCKE--CGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        83 ~~~~~~H~~~h~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~  122 (527)
                       ..|..|+++|+++++|.|.+  |+++|.+...|..|+++|.
T Consensus        76 -~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~  116 (155)
T 2rpc_A           76 -YKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT  116 (155)
T ss_dssp             -HHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTC
T ss_pred             -HHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhC
Confidence             23444555555555555555  5555555555555555544

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=4.2e-19  Score=150.44  Aligned_cols=111  Identities=19%  Similarity=0.189  Sum_probs=93.1

Q ss_pred             cCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccccccccccc--cccc-----ccCCcccccccccCCCccccCC
Q 041528            6 QKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNI--DKIF-----SGRNIKKDSCFEAGGQSGYVLR   78 (527)
Q Consensus         6 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~--~~~~-----~~~~~~~~~c~~c~~~~~~~c~   78 (527)
                      +++++|+|++|++.|.....|.+|+++|++++|| .|+.|++.|...  ...+     ......+|.|.+|++.|...  
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~--   79 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPF-ECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR--   79 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSC-BCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSH--
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCe-ECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCH--
Confidence            5789999999999999999999999999999999 999999987655  2222     12344667788887777653  


Q ss_pred             CCCcccccchhhhhccCCCccccccccccccChhhHHHHHh-hhcCC
Q 041528           79 ANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMA-CHSEK  124 (527)
Q Consensus        79 ~c~~~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~-~H~~~  124 (527)
                           ..|..|+++|++++||.|++|++.|.+...|..|++ +|.++
T Consensus        80 -----~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           80 -----MELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             -----HHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             -----HHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence                 367779999999999999999999999999999996 67654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.75  E-value=5.2e-21  Score=161.08  Aligned_cols=109  Identities=17%  Similarity=0.236  Sum_probs=100.8

Q ss_pred             cCCcccccc--ccccccCccccccccccCCCCC--CCC--cccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCc
Q 041528          373 KRSQFKCLT--CNKVFHSPRSLWGHTASHSKIN--GCC--ESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLS  446 (527)
Q Consensus       373 ~~~~~~C~~--Cgk~F~~~~~L~~H~~~H~~~~--~C~--~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~  446 (527)
                      ++++|.|.+  ||+.|.+...|..|+++|++++  .|+  .|++.|.....|..|...+....+|.|++||+.|  ....
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f--~~~~   80 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKF--SRSD   80 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE--SCHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchh--CCHH
Confidence            568899997  9999999999999999998765  888  7999999888888887777778889999999999  8999


Q ss_pred             cccccccccCCCCCccC--CCcCccccchhhhccccccc
Q 041528          447 TNVDKRLGSKKSKGHEC--PFCFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       447 ~l~~h~~~Ht~ekp~~C--~iC~k~F~~~~~L~~H~r~H  483 (527)
                      .|..|+++|++++||.|  ++|++.|.+...|..|+++|
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999  89999999999999999998

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.75  E-value=2.6e-20  Score=158.07  Aligned_cols=111  Identities=20%  Similarity=0.239  Sum_probs=97.7

Q ss_pred             CCccccc--cccccccCccccccccccCCCCC--CCCcccccccCCCcCcCCCCCCCCCCCccccc--CCCCcccccCcc
Q 041528          374 RSQFKCL--TCNKVFHSPRSLWGHTASHSKIN--GCCESINESSENSRETDSFPVPMPNSKFCKSV--NGKTPIAQNLST  447 (527)
Q Consensus       374 ~~~~~C~--~Cgk~F~~~~~L~~H~~~H~~~~--~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~--C~K~f~~~~~~~  447 (527)
                      .++|.|.  .||+.|.+...|..|+++| +++  .|+.|++.|.....|..|...+....+|.|..  |++.|  .....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f--~~~~~   79 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRF--SLDFN   79 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEE--SCHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCcc--CCHHH
Confidence            4689999  8999999999999999999 443  89999999998888888888888888899986  99999  89999


Q ss_pred             ccccccccCCCCCccCCC--cCccccchhhhcccccccccCC
Q 041528          448 NVDKRLGSKKSKGHECPF--CFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       448 l~~h~~~Ht~ekp~~C~i--C~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      |..|+++|++++||.|++  |++.|.+...|..|+++|+++.
T Consensus        80 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           80 LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             HHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             HHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            999999999999999965  9999999999999999998864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.8e-19  Score=145.50  Aligned_cols=90  Identities=18%  Similarity=0.251  Sum_probs=82.5

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      ++++|.|.+|++.|.+...|..|+++|+++++                          |.|++|++.|  .....|..|+
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------~~C~~C~~~f--~~~~~l~~H~   56 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP--------------------------YKCKTCDYAA--ADSSSLNKHL   56 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCS--------------------------EECSSSCCEE--SSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCC--------------------------EeCCCCCCcc--CCHHHHHHHH
Confidence            56899999999999999999999999998543                          4578999999  8899999999


Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccCCCCC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSED  490 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~~~~  490 (527)
                      ++|+++++|.|++|++.|.+...|..|+++|+++.++.
T Consensus        57 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           57 RIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS   94 (96)
T ss_dssp             HHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCCC
T ss_pred             HHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            99999999999999999999999999999999887654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.74  E-value=6.8e-20  Score=162.01  Aligned_cols=114  Identities=17%  Similarity=0.179  Sum_probs=103.5

Q ss_pred             cCCccccccccccccCcccccccccc-CCCC----------CCCCcccccccCCCcCcCCCCCCCCCCCccccc--CCCC
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTAS-HSKI----------NGCCESINESSENSRETDSFPVPMPNSKFCKSV--NGKT  439 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~-H~~~----------~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~--C~K~  439 (527)
                      ...+|.|.+||+.|.+...|..|+++ |.+.          +.|+.|++.|.....|..|...+.....|.|.+  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            45789999999999999999999998 7764          369999999998888888887777788899998  9999


Q ss_pred             cccccCccccccccccCCCCCccCCC--cCccccchhhhcccccccccCCC
Q 041528          440 PIAQNLSTNVDKRLGSKKSKGHECPF--CFRVFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       440 f~~~~~~~l~~h~~~Ht~ekp~~C~i--C~k~F~~~~~L~~H~r~H~~~~~  488 (527)
                      |  .....|..|+++|++++||.|++  |+++|.+...|..|+++|+++..
T Consensus       102 f--~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~  150 (155)
T 2rpc_A          102 F--ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS  150 (155)
T ss_dssp             E--SCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCC
T ss_pred             c--CCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            9  89999999999999999999998  99999999999999999998753

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=1.9e-19  Score=130.72  Aligned_cols=59  Identities=22%  Similarity=0.456  Sum_probs=52.5

Q ss_pred             CCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccccc
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRL  453 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~  453 (527)
                      ++||.|++|||.|...+.|..|+++|++                                                    
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~----------------------------------------------------   29 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLG----------------------------------------------------   29 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHT----------------------------------------------------
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCC----------------------------------------------------
Confidence            5889999999999999988888888776                                                    


Q ss_pred             ccCCCCCccCCCcCccccchhhhcccccccccCCC
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~~  488 (527)
                          +|||.|++|||+|.+..+|.+||++|+|+.+
T Consensus        30 ----ekp~~C~~C~k~F~~~~~L~~H~~~Htgepa   60 (60)
T 4gzn_C           30 ----YRPRSCPECGKCFRDQSEVNRHLKVHQNKPA   60 (60)
T ss_dssp             ----CCCEECTTTCCEESSHHHHHHHGGGGSCC--
T ss_pred             ----CcCeECCCCCCCcCCHHHHHHHhCccCCCCC
Confidence                8999999999999999999999999998754

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.73  E-value=8.9e-19  Score=144.18  Aligned_cols=89  Identities=22%  Similarity=0.337  Sum_probs=81.6

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      .+++|.|.+|++.|.+...|..|+++|+++++                          |.|.+|++.|  .....|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------~~C~~C~~~f--~~~~~l~~H~   65 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERP--------------------------YTCDICHKAF--RRQDHLRDHR   65 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCC--------------------------CBCSSSCCBC--SCHHHHHHHG
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCC--------------------------cCCCCccchh--CCHHHHHHHH
Confidence            56899999999999999999999999998553                          4488999999  8999999999


Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccCCCC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSE  489 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~~~  489 (527)
                      ++|+++++|.|++|++.|.+...|..|+++|.++...
T Consensus        66 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           66 YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSP  102 (106)
T ss_dssp             GGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCC
T ss_pred             HHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCC
Confidence            9999999999999999999999999999999987653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.71  E-value=2.6e-18  Score=144.47  Aligned_cols=106  Identities=24%  Similarity=0.362  Sum_probs=90.2

Q ss_pred             cCCCceeccc--CCCccCCchhHHHHhhhhcCCCCccccc--ccccccccc------ccccccCCcccccccccCCCccc
Q 041528            6 QKKKLFVCKY--CNKRYPCGKSLGGHIRTHMNNGNSAEAE--GEGEVKLNI------DKIFSGRNIKKDSCFEAGGQSGY   75 (527)
Q Consensus         6 ~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~~C~--~C~~~~~~~------~~~~~~~~~~~~~c~~c~~~~~~   75 (527)
                      +++++|.|.+  |++.|.+...|.+|+++|+++++| .|+  .|++.|...      .+.+.+  ..+|.|.+|++.|..
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~   78 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPY-QCDFKDCERRFSRSDQLKRHQRRHTG--VKPFQCKTCQRKFSR   78 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCE-ECCSTTCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCc-cCCCCCCcCccCCHHHHHHHHHHcCC--CCCccCCccCchhCC
Confidence            5789999997  999999999999999999999999 999  798887555      233332  356788888877765


Q ss_pred             cCCCCCcccccchhhhhccCCCcccc--ccccccccChhhHHHHHhhh
Q 041528           76 VLRANPKRTRRFVDSNTLTSQQEMVC--KECGKVFQSLKALCGHMACH  121 (527)
Q Consensus        76 ~c~~c~~~~~~~~H~~~h~~~k~~~C--~~Cgk~F~~~~~L~~H~~~H  121 (527)
                      .       ..|..|+++|+++++|.|  ++||++|.+...|..|+++|
T Consensus        79 ~-------~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           79 S-------DHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             H-------HHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             H-------HHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            3       367779999999999999  89999999999999999987

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.70  E-value=3.4e-19  Score=139.20  Aligned_cols=82  Identities=26%  Similarity=0.376  Sum_probs=75.5

Q ss_pred             ccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccccccc
Q 041528          376 QFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGS  455 (527)
Q Consensus       376 ~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~~H  455 (527)
                      ||.|.+||+.|.+...|..|+++|.++++                          |.|+.|++.|  .....|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------~~C~~C~~~f--~~~~~l~~H~~~h   52 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRP--------------------------YPCQYCGKRF--HQKSDMKKHTFIH   52 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCC--------------------------EECSSSCCEE--SSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCC--------------------------eeCCcCChhh--CCHHHHHHHHHHh
Confidence            58999999999999999999999987543                          4578999999  8999999999999


Q ss_pred             CCCCCccCCCcCccccchhhhccccccccc
Q 041528          456 KKSKGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       456 t~ekp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      ++++||.|++|++.|.+...|..|+++|+|
T Consensus        53 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           53 TGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             cCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            999999999999999999999999999975

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.69  E-value=7.1e-18  Score=142.95  Aligned_cols=110  Identities=19%  Similarity=0.310  Sum_probs=85.9

Q ss_pred             CCCceecc--cCCCccCCchhHHHHhhhhcCCCCcccccccccccccc------ccccccCCcccccccc--cCCCcccc
Q 041528            7 KKKLFVCK--YCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNI------DKIFSGRNIKKDSCFE--AGGQSGYV   76 (527)
Q Consensus         7 ~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~------~~~~~~~~~~~~~c~~--c~~~~~~~   76 (527)
                      ++++|.|+  .|++.|.+...|.+|+++| ++++| .|+.|++.|...      .+.+.+  ..+|.|.+  |++.|...
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~   77 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVH-VCAECGKAFVESSKLKRHQLVHTG--EKPFQCTFEGCGKRFSLD   77 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCE-ECTTTCCEESSHHHHHHHGGGTSC--CCCEECCSTTCCCEESCH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCe-ECCCCCchhCCHHHHHHHHHHcCC--CCCeeCCCCCCcCccCCH
Confidence            36899999  8999999999999999999 88999 999999887555      333332  25677764  77766552


Q ss_pred             CCCCCcccccchhhhhccCCCccccc--cccccccChhhHHHHHhhhcCCCCC
Q 041528           77 LRANPKRTRRFVDSNTLTSQQEMVCK--ECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        77 c~~c~~~~~~~~H~~~h~~~k~~~C~--~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                             ..|..|+++|.++++|.|+  .|+++|.+..+|..|+++|+++++.
T Consensus        78 -------~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           78 -------FNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             -------HHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             -------HHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence                   3677799999999999996  5999999999999999999987654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.6e-17  Score=133.92  Aligned_cols=92  Identities=14%  Similarity=0.243  Sum_probs=80.1

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcc
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKR   83 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~   83 (527)
                      .+.++++|.|.+|++.|.....|.+|+++|+++++|                         .|.+|++.|...       
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-------------------------~C~~C~~~f~~~-------   49 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPY-------------------------KCKTCDYAAADS-------   49 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSE-------------------------ECSSSCCEESSH-------
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCE-------------------------eCCCCCCccCCH-------
Confidence            467889999999999999999999999999999988                         445555555542       


Q ss_pred             cccchhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCC
Q 041528           84 TRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        84 ~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                      ..|..|+++|.++++|.|++|++.|.....|..|+++|+++.+.
T Consensus        50 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           50 SSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             HHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            36778999999999999999999999999999999999987654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=3.9e-17  Score=136.46  Aligned_cols=94  Identities=20%  Similarity=0.280  Sum_probs=79.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhh--hcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCC
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRT--HMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRAN   80 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~--H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c   80 (527)
                      ++|++++||.|.+|++.|.....|.+|+++  |.+.+++                        +.|.+|++.|.+..   
T Consensus        12 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~------------------------~~C~~C~~~f~f~~---   64 (115)
T 2dmi_A           12 SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNH------------------------ETDNNNPKRWSKPR---   64 (115)
T ss_dssp             CCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCC------------------------CCCCCCCSCCSSCC---
T ss_pred             eeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCC------------------------ccCCCCCccccccc---
Confidence            389999999999999999999999999998  7777766                        34666666663211   


Q ss_pred             CcccccchhhhhccCCCccccccccccccChhhHHHHHhhhcCCC
Q 041528           81 PKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        81 ~~~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                        ...|..|+++|++++||+|++|++.|.+..+|..|+++|....
T Consensus        65 --~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           65 --KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             --CCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             --HHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence              2367789999999999999999999999999999999987543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.7e-18  Score=138.19  Aligned_cols=88  Identities=25%  Similarity=0.271  Sum_probs=79.7

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      ++++|.|.+|++.|.+...|..|+++|+++++                          |.|++|++.|  .....|..|+
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------~~C~~C~~~f--~~~~~l~~H~   55 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKP--------------------------YSCPVCGLRF--KRKDRMSYHV   55 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCS--------------------------EECSSSCCEE--SCHHHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCC--------------------------CcCCCCCCcc--CCHHHHHHHH
Confidence            56899999999999999999999999998553                          4578999999  8999999999


Q ss_pred             cccCCC--CCccCCCcCccccchhhhccccc-ccccCCC
Q 041528          453 LGSKKS--KGHECPFCFRVFKSGQALGGHKR-SHFVGGS  488 (527)
Q Consensus       453 ~~Ht~e--kp~~C~iC~k~F~~~~~L~~H~r-~H~~~~~  488 (527)
                      ++|+++  ++|.|++|++.|.+...|..|++ +|.++++
T Consensus        56 ~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~s   94 (95)
T 2yt9_A           56 RSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPSS   94 (95)
T ss_dssp             HHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCCSC
T ss_pred             HHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCCCC
Confidence            999998  99999999999999999999986 8987653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=8.1e-19  Score=139.73  Aligned_cols=86  Identities=17%  Similarity=0.272  Sum_probs=77.1

Q ss_pred             CCccccc--cccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccc
Q 041528          374 RSQFKCL--TCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDK  451 (527)
Q Consensus       374 ~~~~~C~--~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h  451 (527)
                      +++|.|.  .|++.|.+...|..|+++|+++++                          |.|++|++.|  .....|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------~~C~~C~~~f--~~~~~l~~H   53 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKP--------------------------FQCRICMRNF--SRSDHLTTH   53 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC--------------------------EECTTTCCEE--SCHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCC--------------------------ccCCCCCccc--CCHHHHHHH
Confidence            5789998  599999999999999999987542                          4578999999  899999999


Q ss_pred             ccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          452 RLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       452 ~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus        54 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           54 IRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             HHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            999999999999999999999999999999999763

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=2e-17  Score=138.27  Aligned_cols=91  Identities=19%  Similarity=0.196  Sum_probs=77.4

Q ss_pred             ccCCccccccccccccCcccccccccc--CCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccc
Q 041528          372 QKRSQFKCLTCNKVFHSPRSLWGHTAS--HSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNV  449 (527)
Q Consensus       372 ~~~~~~~C~~Cgk~F~~~~~L~~H~~~--H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~  449 (527)
                      .++++|.|.+||+.|.+...|..|+++  |.++.+                         .+.|.+|++.|+......|.
T Consensus        15 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~-------------------------~~~C~~C~~~f~f~~~~~l~   69 (115)
T 2dmi_A           15 TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDN-------------------------HETDNNNPKRWSKPRKRSLL   69 (115)
T ss_dssp             CCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSC-------------------------CCCCCCCCSCCSSCCCCCCC
T ss_pred             CCCCCEECCccCchhcCHHHHHHHHHHhCccccCC-------------------------CccCCCCCcccccccHHHHH
Confidence            357899999999999999999999998  655432                         12367888887435788899


Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      .|+++|++++||.|++|++.|.+...|..|+++|....
T Consensus        70 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             HHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999986543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.68  E-value=4.3e-17  Score=134.03  Aligned_cols=91  Identities=23%  Similarity=0.386  Sum_probs=79.6

Q ss_pred             ccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCccc
Q 041528            5 NQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRT   84 (527)
Q Consensus         5 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~   84 (527)
                      ..++++|.|.+|++.|.....|.+|+++|+++++|                         .|.+|++.|...       .
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-------------------------~C~~C~~~f~~~-------~   59 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPY-------------------------TCDICHKAFRRQ-------D   59 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCC-------------------------BCSSSCCBCSCH-------H
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCc-------------------------CCCCccchhCCH-------H
Confidence            34578999999999999999999999999999998                         455556556542       3


Q ss_pred             ccchhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCC
Q 041528           85 RRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        85 ~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                      .|..|+++|.++++|.|.+|++.|.+...|..|+++|.+++++
T Consensus        60 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           60 HLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSP  102 (106)
T ss_dssp             HHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCC
T ss_pred             HHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCC
Confidence            6778999999999999999999999999999999999998776

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.66  E-value=3.1e-17  Score=130.44  Aligned_cols=87  Identities=21%  Similarity=0.368  Sum_probs=73.7

Q ss_pred             CCCceecc--cCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCccc
Q 041528            7 KKKLFVCK--YCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRT   84 (527)
Q Consensus         7 ~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~   84 (527)
                      +++||.|+  .|++.|.....|.+|+++|+++++|                         .|..|++.|...       .
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-------------------------~C~~C~~~f~~~-------~   48 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPF-------------------------QCRICMRNFSRS-------D   48 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCE-------------------------ECTTTCCEESCH-------H
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCc-------------------------cCCCCCcccCCH-------H
Confidence            47899998  6999999999999999999999988                         455555555542       3


Q ss_pred             ccchhhhhccCCCccccccccccccChhhHHHHHhhhcCCC
Q 041528           85 RRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        85 ~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      .|..|+++|.++++|.|++|+++|.+...|..|+++|++++
T Consensus        49 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           49 HLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             HHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            67789999999999999999999999999999999999764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=6.1e-17  Score=133.39  Aligned_cols=92  Identities=16%  Similarity=0.290  Sum_probs=79.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPK   82 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~   82 (527)
                      ++|+++++|.|.+|++.|.....|.+|+++|.  ++|                         .|.+|++.|...      
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~-------------------------~C~~C~~~f~~~------   55 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAA-------------------------VCPYCSLRFFSP------   55 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSB-------------------------CCTTTCCCBSSH------
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCc-------------------------cCCCCCCccCCH------
Confidence            48999999999999999999999999999994  576                         555666666542      


Q ss_pred             ccccchhhhhccCCCccccccccccccChhhHHHHHh-hhcCCCCCCC
Q 041528           83 RTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMA-CHSEKDNKMK  129 (527)
Q Consensus        83 ~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~-~H~~~~~~~~  129 (527)
                       ..|..|++ |+++++|+|++|++.|.+..+|..|++ +|.+++++..
T Consensus        56 -~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           56 -ELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             -HHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             -HHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence             36778986 999999999999999999999999997 9998887754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.64  E-value=6.1e-17  Score=126.28  Aligned_cols=82  Identities=23%  Similarity=0.385  Sum_probs=71.6

Q ss_pred             ceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcccccchh
Q 041528           10 LFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRFVD   89 (527)
Q Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~~~H   89 (527)
                      ||.|.+|++.|.....|.+|+++|.++++| .                        |..|++.|...       ..|..|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-~------------------------C~~C~~~f~~~-------~~l~~H   48 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPY-P------------------------CQYCGKRFHQK-------SDMKKH   48 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCE-E------------------------CSSSCCEESSH-------HHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCe-e------------------------CCcCChhhCCH-------HHHHHH
Confidence            699999999999999999999999999998 4                        45555555442       367789


Q ss_pred             hhhccCCCccccccccccccChhhHHHHHhhhcC
Q 041528           90 SNTLTSQQEMVCKECGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        90 ~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      +++|.++++|.|++|+++|.+..+|..|+++|+|
T Consensus        49 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           49 TFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             HHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            9999999999999999999999999999999975

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.8e-16  Score=139.75  Aligned_cols=110  Identities=18%  Similarity=0.252  Sum_probs=92.8

Q ss_pred             cccCCCceecccC-----CCccCCchhHHHHhhhhcCCCCcccccc--cccccccc------ccccccCCcccccccc--
Q 041528            4 ANQKKKLFVCKYC-----NKRYPCGKSLGGHIRTHMNNGNSAEAEG--EGEVKLNI------DKIFSGRNIKKDSCFE--   68 (527)
Q Consensus         4 ~h~~~~~~~C~~C-----~k~f~~~~~L~~H~~~H~~~~p~~~C~~--C~~~~~~~------~~~~~~~~~~~~~c~~--   68 (527)
                      +|+++++|.|.+|     ++.|.....|.+|+++|++++|| .|+.  |++.|...      .+.+.+  ..+|.|.+  
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~-~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~  104 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPH-KCTFEGCRKSYSRLENLKTHLRSHTG--EKPYMCEHEG  104 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCC-CCCSTTCCCCCSSHHHHHHHHHHTTT--CCCEECCSTT
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCc-cCCCCCCCCcccCHHHHHHHHHHcCC--CCCeeCCCCC
Confidence            6888999998753     49999999999999999999999 9985  99987655      333333  35788887  


Q ss_pred             cCCCccccCCCCCcccccchhh-hhccCCCcccccc--ccccccChhhHHHHHhhhcC
Q 041528           69 AGGQSGYVLRANPKRTRRFVDS-NTLTSQQEMVCKE--CGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        69 c~~~~~~~c~~c~~~~~~~~H~-~~h~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      |++.|...       ..|..|+ ++|+++++|.|++  |+++|.+...|..|+++|+|
T Consensus       105 C~~~f~~~-------~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          105 CSKAFSNA-------SDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCCEESSS-------STTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCccCCH-------HHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            88888663       3788898 8899999999999  99999999999999999875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.1e-16  Score=132.41  Aligned_cols=88  Identities=17%  Similarity=0.302  Sum_probs=77.7

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcc
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKR   83 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~   83 (527)
                      .|+++++|.| .|++.|.....|.+|+++|+++++|                         .|.+|++.|...       
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~-------------------------~C~~C~~~f~~~-------   50 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPY-------------------------GCGVCGKKFKMK-------   50 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSE-------------------------ECTTTSCEESSS-------
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCc-------------------------cCCCCCcccCCH-------
Confidence            6899999999 9999999999999999999999988                         455556556542       


Q ss_pred             cccchhhhhccCCCccccccccccccChhhHHHHHhhhcCC
Q 041528           84 TRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        84 ~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      ..|..|+++|.++++|.|++|++.|.....|..|++.|.+.
T Consensus        51 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           51 HHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence            36778999999999999999999999999999999998843

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.6e-17  Score=137.56  Aligned_cols=85  Identities=20%  Similarity=0.229  Sum_probs=78.2

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      ++++|.| +|++.|.+...|..|+++|+++++                          |.|.+|++.|  .....|..|+
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~--------------------------~~C~~C~~~f--~~~~~l~~H~   57 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRP--------------------------YGCGVCGKKF--KMKHHLVGHM   57 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCS--------------------------EECTTTSCEE--SSSHHHHHHH
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcC--------------------------ccCCCCCccc--CCHHHHHHHH
Confidence            5789999 999999999999999999998543                          4578999999  8999999999


Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      ++|+++++|.|++|++.|.+...|..||++|...
T Consensus        58 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           58 KIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             TTTCCCCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence            9999999999999999999999999999998764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=1.9e-17  Score=131.44  Aligned_cols=83  Identities=18%  Similarity=0.287  Sum_probs=75.8

Q ss_pred             CCcccccc--ccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccc--cCCCCcccccCcccc
Q 041528          374 RSQFKCLT--CNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKS--VNGKTPIAQNLSTNV  449 (527)
Q Consensus       374 ~~~~~C~~--Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~--~C~K~f~~~~~~~l~  449 (527)
                      .++|.|.+  ||+.|.+...|..|+++|+++.+                          |.|+  .|++.|  .....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------~~C~~~~C~~~f--~~~~~l~   54 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP--------------------------YHCDWDGCGWKF--ARSDELT   54 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCC--------------------------EECCSTTTCCEE--SSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC--------------------------cCCCCCCCCCcc--CCHHHHH
Confidence            47899999  99999999999999999998553                          4465  599999  8899999


Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccc
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~  484 (527)
                      .|+++|++++||.|++|++.|.+...|..|+++|+
T Consensus        55 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           55 RHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             HHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            99999999999999999999999999999999995

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.4e-17  Score=137.21  Aligned_cols=85  Identities=16%  Similarity=0.165  Sum_probs=75.7

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      ++++|.|.+|++.|.....|..|+++|.+.+.                            |.+|++.|  .....|..|+
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~----------------------------C~~C~~~f--~~~~~l~~H~   62 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV----------------------------CPYCSLRF--FSPELKQEHE   62 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBC----------------------------CTTTCCCB--SSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCCCCcc----------------------------CCCCCCcc--CCHHHHHHHH
Confidence            56899999999999999999999999965333                            66888888  7888999999


Q ss_pred             cccCCCCCccCCCcCccccchhhhccccc-ccccCCC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKR-SHFVGGS  488 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r-~H~~~~~  488 (527)
                      + |++++||.|++|++.|.+...|..|++ +|.++..
T Consensus        63 ~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~   98 (107)
T 1wjp_A           63 S-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNM   98 (107)
T ss_dssp             H-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             H-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCC
Confidence            6 999999999999999999999999997 8877654

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=2.4e-16  Score=126.66  Aligned_cols=87  Identities=22%  Similarity=0.342  Sum_probs=75.2

Q ss_pred             cCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcccc
Q 041528            6 QKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTR   85 (527)
Q Consensus         6 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~   85 (527)
                      +++++|.|.+|++.|.....|.+|+++|+++++| .                        |.+|++.|...       ..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~-~------------------------C~~C~~~f~~~-------~~   50 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPY-S------------------------CPVCGLRFKRK-------DR   50 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSE-E------------------------CSSSCCEESCH-------HH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCC-c------------------------CCCCCCccCCH-------HH
Confidence            5789999999999999999999999999999998 4                        45555555542       36


Q ss_pred             cchhhhhccCC--CccccccccccccChhhHHHHHh-hhcCC
Q 041528           86 RFVDSNTLTSQ--QEMVCKECGKVFQSLKALCGHMA-CHSEK  124 (527)
Q Consensus        86 ~~~H~~~h~~~--k~~~C~~Cgk~F~~~~~L~~H~~-~H~~~  124 (527)
                      |..|+++|.++  ++|+|++|++.|.+...|..|++ +|.+.
T Consensus        51 l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           51 MSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             HHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            77899999987  99999999999999999999995 88864

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.62  E-value=2.3e-17  Score=134.05  Aligned_cols=85  Identities=20%  Similarity=0.246  Sum_probs=77.2

Q ss_pred             cCCcccccc--ccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccc--cCCCCcccccCccc
Q 041528          373 KRSQFKCLT--CNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKS--VNGKTPIAQNLSTN  448 (527)
Q Consensus       373 ~~~~~~C~~--Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~--~C~K~f~~~~~~~l  448 (527)
                      ..++|.|.+  |++.|.....|..|+++|+++++                          |.|.  .|++.|  .....|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------~~C~~~~C~~~f--~~~~~l   63 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP--------------------------YKCTWEGCDWRF--ARSDEL   63 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCC--------------------------EECCSSSCCCEE--SSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCC--------------------------eeCCCCCCCCcc--CCHHHH
Confidence            568899997  99999999999999999998553                          3464  699999  899999


Q ss_pred             cccccccCCCCCccCCCcCccccchhhhccccccccc
Q 041528          449 VDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       449 ~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      ..|+++|++++||.|++|++.|.+...|..||++|++
T Consensus        64 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999974

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.60  E-value=5.5e-16  Score=112.32  Aligned_cols=37  Identities=24%  Similarity=0.498  Sum_probs=28.2

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      |+++|+|++||+|++||++|.+.++|.+|+++|+|++
T Consensus        23 H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C           23 HRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             HHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             HHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            3344445556678889999999999999999999864

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=2.7e-15  Score=121.63  Aligned_cols=87  Identities=22%  Similarity=0.358  Sum_probs=74.4

Q ss_pred             CCCceeccc--CCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCccc
Q 041528            7 KKKLFVCKY--CNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRT   84 (527)
Q Consensus         7 ~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~   84 (527)
                      ..++|.|..  |++.|.....|.+|+++|+++++| .|..                      ..|++.|...       .
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~----------------------~~C~~~f~~~-------~   61 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPY-KCTW----------------------EGCDWRFARS-------D   61 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCE-ECCS----------------------SSCCCEESSH-------H
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCe-eCCC----------------------CCCCCccCCH-------H
Confidence            467999997  999999999999999999999998 5531                      1355555542       3


Q ss_pred             ccchhhhhccCCCccccccccccccChhhHHHHHhhhcC
Q 041528           85 RRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        85 ~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      .|..|+++|+++++|.|++|++.|.+...|..|+++|.+
T Consensus        62 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           62 ELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            677899999999999999999999999999999999974

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.53  E-value=3.3e-15  Score=118.35  Aligned_cols=86  Identities=22%  Similarity=0.379  Sum_probs=73.0

Q ss_pred             CCCceeccc--CCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCccc
Q 041528            7 KKKLFVCKY--CNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRT   84 (527)
Q Consensus         7 ~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~   84 (527)
                      +.++|.|..  |++.|.....|.+|+++|+++++| .|+.                      ..|++.|...       .
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~----------------------~~C~~~f~~~-------~   51 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPY-HCDW----------------------DGCGWKFARS-------D   51 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCE-ECCS----------------------TTTCCEESSH-------H
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCc-CCCC----------------------CCCCCccCCH-------H
Confidence            357899999  999999999999999999999998 5531                      1356656542       3


Q ss_pred             ccchhhhhccCCCccccccccccccChhhHHHHHhhhc
Q 041528           85 RRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        85 ~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      .|..|+++|+++++|.|++|++.|.....|..|+++|.
T Consensus        52 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           52 ELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             HHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            67789999999999999999999999999999999984

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.48  E-value=7.1e-17  Score=127.91  Aligned_cols=83  Identities=13%  Similarity=0.090  Sum_probs=74.7

Q ss_pred             CCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccccc
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRL  453 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~  453 (527)
                      +++|.|.+||+.|.+.+.|..|+++|+++++                          |.|++||+.|  .....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~--------------------------~~C~~C~k~f--~~~~~L~~H~~   52 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP--------------------------FACDICGRKF--ARSDERKRHRD   52 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC--------------------------EECTTTCCEE--SSHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCC--------------------------ccCCCCCCcc--CCHHHHHHHHH
Confidence            4789999999999999999999999998653                          4578999999  89999999999


Q ss_pred             ccCCCCCccCCCcCccccchhhhccccccccc
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      +|++ ++|.|+.|++.|.+...|..|++.+.+
T Consensus        53 ~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           53 IQHI-LPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCC-CcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence            9985 899999999999999999999887543

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.3e-15  Score=115.51  Aligned_cols=71  Identities=17%  Similarity=0.192  Sum_probs=63.8

Q ss_pred             cCCcccccc--ccccccCccccccccc-cCCCCCCCCcccccccCCCcCcCCCCCCCCCCCccccc--CCCCcccccCcc
Q 041528          373 KRSQFKCLT--CNKVFHSPRSLWGHTA-SHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSV--NGKTPIAQNLST  447 (527)
Q Consensus       373 ~~~~~~C~~--Cgk~F~~~~~L~~H~~-~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~--C~K~f~~~~~~~  447 (527)
                      ++++|.|..  |++.|.+...|..|++ +|+++++                          |.|++  |++.|  .....
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~--------------------------~~C~~~~C~k~f--~~~~~   55 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS--------------------------FSCPEPACGKSF--NFKKH   55 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC--------------------------EECSCTTTCCEE--SSHHH
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC--------------------------eECCCCCCcCcc--CCHHH
Confidence            568899997  9999999999999999 7988553                          44777  99999  89999


Q ss_pred             ccccccccCCCCCccCCCcCcccc
Q 041528          448 NVDKRLGSKKSKGHECPFCFRVFK  471 (527)
Q Consensus       448 l~~h~~~Ht~ekp~~C~iC~k~F~  471 (527)
                      |+.|+++|++++||.|++|+++|.
T Consensus        56 L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           56 LKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             HHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCCCCCCCC
Confidence            999999999999999999999995

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.46  E-value=1.6e-15  Score=118.99  Aligned_cols=78  Identities=19%  Similarity=0.111  Sum_probs=71.5

Q ss_pred             cccc--ccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCccccc--CCCCcccccCcccccc
Q 041528          376 QFKC--LTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSV--NGKTPIAQNLSTNVDK  451 (527)
Q Consensus       376 ~~~C--~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~--C~K~f~~~~~~~l~~h  451 (527)
                      ||.|  ++||+.|.+.+.|..|+++|+++++                          |.|++  |++.|  .....|..|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--------------------------~~C~~~~C~~~f--~~~~~l~~H   52 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP--------------------------YECPHEGCDKRF--SLPSRLKRH   52 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC--------------------------EECCSTTCCCEE--SSHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC--------------------------eeCCCCCCcCcc--CCHHHHHHH
Confidence            5899  9999999999999999999998653                          44767  99999  899999999


Q ss_pred             ccccCCCCCccCCC---cCccccchhhhcccccccc
Q 041528          452 RLGSKKSKGHECPF---CFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       452 ~~~Ht~ekp~~C~i---C~k~F~~~~~L~~H~r~H~  484 (527)
                      +++|++   |.|++   |++.|.+...|..|+++|+
T Consensus        53 ~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           53 EKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            999999   99999   9999999999999999984

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.45  E-value=4.4e-15  Score=117.46  Aligned_cols=82  Identities=18%  Similarity=0.257  Sum_probs=70.3

Q ss_pred             CCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcccccc
Q 041528            8 KKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRF   87 (527)
Q Consensus         8 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~~   87 (527)
                      ++||.|.+|++.|.....|.+|+++|++++||                         .|.+|++.|...       ..|.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-------------------------~C~~C~k~f~~~-------~~L~   48 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF-------------------------ACDICGRKFARS-------DERK   48 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCE-------------------------ECTTTCCEESSH-------HHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCc-------------------------cCCCCCCccCCH-------HHHH
Confidence            58999999999999999999999999999998                         455556656542       3677


Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      .|+++|.+ .+|.|+.|++.|.+..+|..|++.+.
T Consensus        49 ~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           49 RHRDIQHI-LPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            89999875 78999999999999999999996654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.45  E-value=2.1e-14  Score=111.89  Aligned_cols=61  Identities=15%  Similarity=0.151  Sum_probs=55.6

Q ss_pred             CCCCCCcccccCCCCcccccCccccccccccCCCCCccCCCcCccccchhhhcccc-cccccCC
Q 041528          425 PMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHK-RSHFVGG  487 (527)
Q Consensus       425 ~~~~~~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~-r~H~~~~  487 (527)
                      ......|.|++|||.|  .....|..|+++|++++||.|++|+|+|.++.+|.+|+ ++|++|.
T Consensus        23 ~~~~~~h~C~~Cgk~F--~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           23 SASAECHLCPVCGESF--ASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCCTTEECTTSCCEE--SSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCEECCCCCCCc--CcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3456678999999999  89999999999999999999999999999999999996 6798764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=5.8e-15  Score=119.38  Aligned_cols=78  Identities=12%  Similarity=0.036  Sum_probs=69.6

Q ss_pred             cccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccc-cCccccccccccCC-CCC
Q 041528          383 NKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQ-NLSTNVDKRLGSKK-SKG  460 (527)
Q Consensus       383 gk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~-~~~~l~~h~~~Ht~-ekp  460 (527)
                      +..|.....+..|+++|+++++                          |.|.+|+|.|  . ....|+.|+++|++ ++|
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~--------------------------~~C~~C~k~f--~~~~~~L~~H~~~h~~~~~~   54 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGE--------------------------AVCPTCNVVT--RKTLVGLKKHMEVCQKLQDA   54 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSC--------------------------CCCTTTCCCC--SSCSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHhccCCC--------------------------cCCCCCCCCh--hhhHHHHHHHHHHHcCCCCC
Confidence            3467788889999999998664                          4488999999  8 99999999999999 999


Q ss_pred             ccCCCcCccccchhhhcccccccccCCC
Q 041528          461 HECPFCFRVFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       461 ~~C~iC~k~F~~~~~L~~H~r~H~~~~~  488 (527)
                      |.|++|+|.|.+...|.+||++|+++..
T Consensus        55 ~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           55 LKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             HSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             EECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999997654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=2.1e-14  Score=108.24  Aligned_cols=60  Identities=22%  Similarity=0.289  Sum_probs=52.9

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      ++++|.|.+|++.|.....|..|+++|++                                                   
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~---------------------------------------------------   34 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIHCT---------------------------------------------------   34 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCC---------------------------------------------------
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCC---------------------------------------------------
Confidence            56788888888888888888888877776                                                   


Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccCCC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~~  488 (527)
                           ++||.|++|++.|.+...|..||++|.++..
T Consensus        35 -----~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A           35 -----DRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             -----SCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             -----CCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence                 7899999999999999999999999998754

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=3.2e-14  Score=103.57  Aligned_cols=32  Identities=25%  Similarity=0.334  Sum_probs=28.7

Q ss_pred             CCCCccCCCcCccccchhhhcccc-cccccCCC
Q 041528          457 KSKGHECPFCFRVFKSGQALGGHK-RSHFVGGS  488 (527)
Q Consensus       457 ~ekp~~C~iC~k~F~~~~~L~~H~-r~H~~~~~  488 (527)
                      +++||.|++|++.|.+...|..|+ ++|.++.+
T Consensus        27 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~   59 (60)
T 2adr_A           27 NEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNLG   59 (60)
T ss_dssp             SSCSEECTTTCCEESSHHHHHHHHTTTSCCSSC
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHHHcCCcCC
Confidence            388999999999999999999996 78988765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.8e-14  Score=109.29  Aligned_cols=60  Identities=28%  Similarity=0.510  Sum_probs=49.8

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      ++++|.|.+|++.|.....|..|+++|++                                                   
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~---------------------------------------------------   39 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILVQHQRVHTG---------------------------------------------------   39 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGC---------------------------------------------------
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHhcCC---------------------------------------------------
Confidence            45677777777777777777777766665                                                   


Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccCCC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~~  488 (527)
                           ++||.|++|++.|.+...|.+|+++|+++.+
T Consensus        40 -----~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           40 -----EKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             -----SCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             -----CCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence                 8899999999999999999999999998754

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.42  E-value=1.9e-14  Score=109.68  Aligned_cols=59  Identities=25%  Similarity=0.420  Sum_probs=52.3

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      +.++|.|.+|++.|.+...|..|+++|++                                                   
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~---------------------------------------------------   42 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTG---------------------------------------------------   42 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCC---------------------------------------------------
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCC---------------------------------------------------
Confidence            56788899999999888888888887776                                                   


Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                           ++||.|++|++.|.+...|.+|+++|+++.
T Consensus        43 -----~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           43 -----EKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             -----CCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             -----CCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence                 789999999999999999999999998764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.41  E-value=3e-14  Score=102.52  Aligned_cols=34  Identities=21%  Similarity=0.342  Sum_probs=29.8

Q ss_pred             ccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +|++++||.|++|++.|.+...|..|+++|.++.
T Consensus        23 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A           23 THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             HTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             hcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            3334889999999999999999999999998764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=6.2e-14  Score=107.74  Aligned_cols=59  Identities=32%  Similarity=0.572  Sum_probs=48.9

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      ++++|.|.+|++.|.....|..|+++|++                                                   
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------------------------------   43 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTG---------------------------------------------------   43 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCC---------------------------------------------------
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCC---------------------------------------------------
Confidence            56889999999999999999999888876                                                   


Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                           ++||.|++|++.|.+...|.+|+++|+++.
T Consensus        44 -----~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   73 (77)
T 2cot_A           44 -----EKPYKCDECGKAFIQRSHLIGHHRVHTGSG   73 (77)
T ss_dssp             -----SCSEECSSSCCEESSHHHHHHHGGGSCCCC
T ss_pred             -----CcCeeCCCCCCccCCHHHHHHHHHHhCCCC
Confidence                 677888888888888888888888887653

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.40  E-value=1.6e-14  Score=104.05  Aligned_cols=56  Identities=29%  Similarity=0.391  Sum_probs=45.2

Q ss_pred             CCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccccc
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRL  453 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~  453 (527)
                      +++|.|.+||+.|.+...|..|+++|++                                                    
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~----------------------------------------------------   29 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTG----------------------------------------------------   29 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHC----------------------------------------------------
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCC----------------------------------------------------
Confidence            4677788888888887777777776665                                                    


Q ss_pred             ccCCCCCccCCCcCccccchhhhccccccccc
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                          ++||.|++|++.|.+...|..|+++|.+
T Consensus        30 ----~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C           30 ----EKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             ----CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence                8899999999999999999999999863

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=8.5e-14  Score=107.44  Aligned_cols=72  Identities=15%  Similarity=0.340  Sum_probs=61.9

Q ss_pred             cCCCceeccc--CCCccCCchhHHHHhh-hhcCCCCccccccccccccccccccccCCcccccccc--cCCCccccCCCC
Q 041528            6 QKKKLFVCKY--CNKRYPCGKSLGGHIR-THMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFE--AGGQSGYVLRAN   80 (527)
Q Consensus         6 ~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~--c~~~~~~~c~~c   80 (527)
                      +++++|.|..  |++.|.....|.+|++ +|+++++|                         .|.+  |++.|...    
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~-------------------------~C~~~~C~k~f~~~----   53 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSF-------------------------SCPEPACGKSFNFK----   53 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCE-------------------------ECSCTTTCCEESSH----
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCe-------------------------ECCCCCCcCccCCH----
Confidence            5789999997  9999999999999999 79999998                         4444  66666542    


Q ss_pred             CcccccchhhhhccCCCcccccccccccc
Q 041528           81 PKRTRRFVDSNTLTSQQEMVCKECGKVFQ  109 (527)
Q Consensus        81 ~~~~~~~~H~~~h~~~k~~~C~~Cgk~F~  109 (527)
                         ..|..|+++|++++||.|++||++|.
T Consensus        54 ---~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           54 ---KHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             ---HHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             ---HHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence               36778999999999999999999995

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.40  E-value=8.5e-14  Score=108.93  Aligned_cols=80  Identities=19%  Similarity=0.245  Sum_probs=67.8

Q ss_pred             ceec--ccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcccccc
Q 041528           10 LFVC--KYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRF   87 (527)
Q Consensus        10 ~~~C--~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~~   87 (527)
                      ||+|  +.|++.|.....|.+|+++|++++|| .|+.                      ..|++.|...       ..|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~-~C~~----------------------~~C~~~f~~~-------~~l~   50 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY-ECPH----------------------EGCDKRFSLP-------SRLK   50 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCE-ECCS----------------------TTCCCEESSH-------HHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCe-eCCC----------------------CCCcCccCCH-------HHHH
Confidence            6999  99999999999999999999999998 4443                      0055556542       3677


Q ss_pred             hhhhhccCCCcccccc---ccccccChhhHHHHHhhhc
Q 041528           88 VDSNTLTSQQEMVCKE---CGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~---Cgk~F~~~~~L~~H~~~H~  122 (527)
                      .|+++|++   |.|.+   |++.|.....|..|+++|+
T Consensus        51 ~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           51 RHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            89999998   99999   9999999999999999874

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=3.5e-14  Score=109.14  Aligned_cols=72  Identities=18%  Similarity=0.143  Sum_probs=61.4

Q ss_pred             ccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccccc-ccCCC-CCccCCCcCc
Q 041528          391 SLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRL-GSKKS-KGHECPFCFR  468 (527)
Q Consensus       391 ~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~-~Ht~e-kp~~C~iC~k  468 (527)
                      +|.+|+++|+++++                          |.|.+|++.|  .....|..|++ .|+++ ++|.|++|++
T Consensus         2 s~~~H~~~H~~~k~--------------------------~~C~~C~k~f--~~~~~L~~H~~~~h~~~~~~~~C~~C~~   53 (77)
T 2ct1_A            2 SSGSSGRTHSGEKP--------------------------YECYICHARF--TQSGTMKMHILQKHTENVAKFHCPHCDT   53 (77)
T ss_dssp             CCCCCCCCCSCCCS--------------------------EECTTTCCEE--SCHHHHHHHHHHHSSSSCSSEECSSSSC
T ss_pred             CCCccccccCCCCC--------------------------eECCCcCchh--CCHHHHHHHHHHhcCCCCCccCCCCCCC
Confidence            57889999998664                          4488999999  88899999986 78875 9999999999


Q ss_pred             cccchhhhcccccccccCCCCC
Q 041528          469 VFKSGQALGGHKRSHFVGGSED  490 (527)
Q Consensus       469 ~F~~~~~L~~H~r~H~~~~~~~  490 (527)
                      .|.+...|..|+++|.+...+.
T Consensus        54 ~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A           54 VIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             EESSHHHHHHHHHHTSCCSCCC
T ss_pred             ccCCHHHHHHHHHHhCCCCCCC
Confidence            9999999999999876655443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=3.8e-14  Score=114.55  Aligned_cols=72  Identities=10%  Similarity=0.083  Sum_probs=48.9

Q ss_pred             CcccCCccccccccccccCccccccccc-cCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccc
Q 041528          370 NAQKRSQFKCLTCNKVFHSPRSLWGHTA-SHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTN  448 (527)
Q Consensus       370 ~~~~~~~~~C~~Cgk~F~~~~~L~~H~~-~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l  448 (527)
                      +..++++|.|.+||+.|...+.|..|++ +|++..                       ...+|.|.+|||.|  .....|
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~-----------------------~ekpf~C~~Cgk~F--~~~~~L   66 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVV-----------------------LNSSYVCVECNFLT--KRYDAL   66 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCC-----------------------CSCCEEETTTTEEE--SSTHHH
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCC-----------------------CCCCcCCCCCCccc--CCHHHH
Confidence            3457899999999999999999999998 585410                       01123355666666  555666


Q ss_pred             ccc-ccccCCCCCccCCCc
Q 041528          449 VDK-RLGSKKSKGHECPFC  466 (527)
Q Consensus       449 ~~h-~~~Ht~ekp~~C~iC  466 (527)
                      ..| +++|+|++||.|.++
T Consensus        67 ~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           67 SEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             HTHHHHTSTTCCCEEEEEC
T ss_pred             HHHHHHhcCCCCCeeCCcc
Confidence            666 566666666666653

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.1e-12  Score=99.34  Aligned_cols=64  Identities=27%  Similarity=0.498  Sum_probs=48.9

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPK   82 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~   82 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|+                                                
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~------------------------------------------------   38 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHT------------------------------------------------   38 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGG------------------------------------------------
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcC------------------------------------------------
Confidence            36777777777777777777777777765554                                                


Q ss_pred             ccccchhhhhccCCCccccccccccccChhhHHHHHhhhcCCCC
Q 041528           83 RTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDN  126 (527)
Q Consensus        83 ~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~  126 (527)
                                  ++++|+|++|++.|.+...|.+|+++|+++..
T Consensus        39 ------------~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           39 ------------GEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             ------------CSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             ------------CCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence                        44567888899999999999999999987654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.2e-13  Score=106.37  Aligned_cols=63  Identities=22%  Similarity=0.343  Sum_probs=53.1

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      ++++|.|.+|++.|.....|..|+++|+++                                                  
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~--------------------------------------------------   33 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAET--------------------------------------------------   33 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHH--------------------------------------------------
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhcc--------------------------------------------------
Confidence            568899999999999999999999888752                                                  


Q ss_pred             cccCCCCCccCCCcCccccchhhhccccc-ccccCCC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKR-SHFVGGS  488 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r-~H~~~~~  488 (527)
                         .++++|.|++|++.|.+...|.+|++ .|.++..
T Consensus        34 ---~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A           34 ---VAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             ---TTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             ---CCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence               13789999999999999999999995 5665544

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=2e-13  Score=109.62  Aligned_cols=58  Identities=21%  Similarity=0.291  Sum_probs=49.7

Q ss_pred             cCCccccccccccc-cCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccc
Q 041528          373 KRSQFKCLTCNKVF-HSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDK  451 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F-~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h  451 (527)
                      .+++|.|++||+.| .....|..|+++| +                                                  
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~--------------------------------------------------   59 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMENC-K--------------------------------------------------   59 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHHH-C--------------------------------------------------
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHHHHH-C--------------------------------------------------
Confidence            45778888888888 8888888888777 6                                                  


Q ss_pred             ccccCCCCCccCCCcCccccchhhhccc-ccccccCC
Q 041528          452 RLGSKKSKGHECPFCFRVFKSGQALGGH-KRSHFVGG  487 (527)
Q Consensus       452 ~~~Ht~ekp~~C~iC~k~F~~~~~L~~H-~r~H~~~~  487 (527)
                            ++||.|++|+|+|.+...|..| |++|++..
T Consensus        60 ------~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           60 ------QEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             ------CCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             ------CCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence                  7899999999999999999999 99998643

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=3e-13  Score=109.16  Aligned_cols=78  Identities=15%  Similarity=0.164  Sum_probs=66.1

Q ss_pred             CccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCcc-ccCCCCCcccccchhhhhccC-
Q 041528           18 KRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSG-YVLRANPKRTRRFVDSNTLTS-   95 (527)
Q Consensus        18 k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~-~~c~~c~~~~~~~~H~~~h~~-   95 (527)
                      ..+.....+.+|+++|+++++|                         .|.+|++.|. ..       ..|..|+++|++ 
T Consensus         4 ~s~~~~~~~~~h~~~h~~~~~~-------------------------~C~~C~k~f~~~~-------~~L~~H~~~h~~~   51 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAIHERGEA-------------------------VCPTCNVVTRKTL-------VGLKKHMEVCQKL   51 (98)
T ss_dssp             CCCCCCCSCSHHHHTTTTTSCC-------------------------CCTTTCCCCSSCS-------HHHHHHHHHHHHH
T ss_pred             CCCCCCCcHHHHHHHhccCCCc-------------------------CCCCCCCChhhhH-------HHHHHHHHHHcCC
Confidence            4567778889999999999998                         4555666665 42       368889999999 


Q ss_pred             CCccccccccccccChhhHHHHHhhhcCCCCC
Q 041528           96 QQEMVCKECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                      +++|+|++|++.|.+...|.+|+++|+++++.
T Consensus        52 ~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           52 QDALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             HHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            99999999999999999999999999988775

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1e-12  Score=97.53  Aligned_cols=64  Identities=22%  Similarity=0.389  Sum_probs=53.4

Q ss_pred             CcccccCCCceecccCCCccCCchhHHHHhhh-hcCCCCccccccccccccccccccccCCcccccccccCCCccccCCC
Q 041528            1 MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRT-HMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRA   79 (527)
Q Consensus         1 m~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~   79 (527)
                      |+++|++++||.|+.|++.|.....|.+|+++ |.                                             
T Consensus         1 i~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~---------------------------------------------   35 (66)
T 2drp_A            1 MEFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK---------------------------------------------   35 (66)
T ss_dssp             --CEEEETTEEECTTTCCEESSHHHHHHHHHHHSS---------------------------------------------
T ss_pred             CccccCCCcceECCCCcchhCCHHHHHHHHHHHcC---------------------------------------------
Confidence            67799999999999999999999999999876 41                                             


Q ss_pred             CCcccccchhhhhccCCCccccccccccccChhhHHHHHhhhcC
Q 041528           80 NPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        80 c~~~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~  123 (527)
                                    ++++||+|++|+++|.+...|..|+++|++
T Consensus        36 --------------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           36 --------------RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             --------------SSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             --------------CCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence                          234567888999999999999999998875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.31  E-value=1.5e-12  Score=101.33  Aligned_cols=54  Identities=24%  Similarity=0.369  Sum_probs=39.3

Q ss_pred             cccccCCCccccCCCCCcccccchhhhhccCCCccccccccccccChhhHHHHH-hhhcCCC
Q 041528           65 SCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHM-ACHSEKD  125 (527)
Q Consensus        65 ~c~~c~~~~~~~c~~c~~~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~-~~H~~~~  125 (527)
                      .|.+|++.|...       ..|..|+++|++++||+|++|+++|.+..+|.+|+ ++|+++.
T Consensus        30 ~C~~Cgk~F~~~-------~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           30 LCPVCGESFASK-------GAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             ECTTSCCEESSH-------HHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             ECCCCCCCcCcH-------HHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            455555555442       24555666667777888999999999999999997 6788764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.9e-13  Score=101.52  Aligned_cols=58  Identities=22%  Similarity=0.599  Sum_probs=50.9

Q ss_pred             cCCccccccccccccCcccccccccc-CCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTAS-HSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDK  451 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~-H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h  451 (527)
                      ++++|.|++||+.|.+...|..|+++ |.                                                   
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~---------------------------------------------------   35 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHK---------------------------------------------------   35 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS---------------------------------------------------
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcC---------------------------------------------------
Confidence            56889999999999999999999887 52                                                   


Q ss_pred             ccccCCCCCccCCCcCccccchhhhccccccccc
Q 041528          452 RLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       452 ~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                          ++++||.|++|+++|.+...|..|+++|.+
T Consensus        36 ----~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           36 ----RNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             ----SSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ----CCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence                137899999999999999999999999865

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.31  E-value=1.8e-12  Score=98.57  Aligned_cols=40  Identities=23%  Similarity=0.349  Sum_probs=29.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                      .|+++|+++++|+|++|++.|.+...|.+|+++|++++++
T Consensus        35 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           35 SHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             HHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             HHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3444445555677888888888888888888888877653

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.31  E-value=2e-14  Score=122.43  Aligned_cols=83  Identities=12%  Similarity=0.116  Sum_probs=70.7

Q ss_pred             cCCcccccccccccc------CccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCc
Q 041528          373 KRSQFKCLTCNKVFH------SPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLS  446 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~------~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~  446 (527)
                      ..+.+.|++|++.|.      ..+.|..|+ .|+++++                          |.|++|||.|  ....
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~--------------------------~~C~~C~k~f--~~~~   88 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQ--------------------------FVCPLCLMPF--SSSV   88 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCS--------------------------EECTTTCCEE--SSHH
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCC--------------------------eECCCCCccc--CCHh
Confidence            346788999998887      556666666 5777553                          4488999999  8999


Q ss_pred             cccccccccCCCCCccCCCcCccccchhhhcccccccccC
Q 041528          447 TNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       447 ~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      .|..|+++|  ++||.|++|+++|.+..+|.+|+++|++.
T Consensus        89 ~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           89 SLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            999999999  99999999999999999999999999875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=7.3e-13  Score=100.29  Aligned_cols=70  Identities=10%  Similarity=-0.153  Sum_probs=45.8

Q ss_pred             CccccccccccCCCCC--CCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccccccCCCCCccCCC
Q 041528          388 SPRSLWGHTASHSKIN--GCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPF  465 (527)
Q Consensus       388 ~~~~L~~H~~~H~~~~--~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~i  465 (527)
                      +.+.|..|+++|++++  .|+.|++.|.....|..       ..+|.|++||+.|  .....|..|+++|++++||.|++
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f--~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDS--CQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTC--SCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhh--cCHHHHHHHHHhhcCCCCCCCCC
Confidence            3556777777777655  55555555554444443       3456667777777  67777777777777777777777


Q ss_pred             c
Q 041528          466 C  466 (527)
Q Consensus       466 C  466 (527)
                      |
T Consensus        73 C   73 (73)
T 2ctu_A           73 G   73 (73)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=2.4e-12  Score=96.70  Aligned_cols=64  Identities=17%  Similarity=0.236  Sum_probs=50.2

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcc
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKR   83 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~   83 (527)
                      .|+++++|.|.+|++.|.....|.+|+++|+                                                 
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------------------------------------------   33 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHC-------------------------------------------------   33 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGC-------------------------------------------------
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcC-------------------------------------------------
Confidence            4667777888888888877777777766664                                                 


Q ss_pred             cccchhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCC
Q 041528           84 TRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        84 ~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                                 ++++|+|++|++.|.+...|..|+++|+++++.
T Consensus        34 -----------~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A           34 -----------TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             -----------CSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             -----------CCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence                       444567888999999999999999999987764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=8.9e-13  Score=103.36  Aligned_cols=73  Identities=12%  Similarity=0.215  Sum_probs=53.1

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhhcCC----CCccccccccccccccccccccCCcccccccccCCCccccCCC
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNN----GNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRA   79 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~   79 (527)
                      +|++++||.|.+|++.|.....|.+|+++|++.    ++|                         .|.+|++.|...   
T Consensus         9 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~-------------------------~C~~C~~~f~~~---   60 (86)
T 1x6h_A            9 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAF-------------------------VCSKCGKTFTRR---   60 (86)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCE-------------------------ECSSSCCEESCH---
T ss_pred             eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcce-------------------------ECCCCCChhCCH---
Confidence            888899999999999999999999998877654    444                         444455555432   


Q ss_pred             CCcccccchhhhhccCCCccccccccccc
Q 041528           80 NPKRTRRFVDSNTLTSQQEMVCKECGKVF  108 (527)
Q Consensus        80 c~~~~~~~~H~~~h~~~k~~~C~~Cgk~F  108 (527)
                          ..|..|+++|.+++++.|..||.+|
T Consensus        61 ----~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           61 ----NTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             ----HHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             ----HHHHHHHHHccCCCCcccCCCCCCC
Confidence                2556677777777777777777665

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.1e-12  Score=100.63  Aligned_cols=36  Identities=22%  Similarity=0.520  Sum_probs=24.9

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhhcCCCCc
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNS   39 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~   39 (527)
                      .+.++++|.|.+|++.|.....|.+|+++|++++||
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   47 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPY   47 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSE
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCe
Confidence            345667777777777777777777777766666555

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=3.7e-13  Score=105.61  Aligned_cols=72  Identities=13%  Similarity=0.050  Sum_probs=61.4

Q ss_pred             ccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccccccCCC----CCccCCCc
Q 041528          391 SLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKS----KGHECPFC  466 (527)
Q Consensus       391 ~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~~Ht~e----kp~~C~iC  466 (527)
                      +|..|+++|+++++                          |.|.+|++.|  .....|..|+++|.++    ++|.|++|
T Consensus         2 s~~~H~~~H~~~k~--------------------------~~C~~C~~~f--~~~~~l~~H~~~~~~~~~~~~~~~C~~C   53 (86)
T 1x6h_A            2 SSGSSGRTHTGEKP--------------------------YACSHCDKTF--RQKQLLDMHFKRYHDPNFVPAAFVCSKC   53 (86)
T ss_dssp             TTTCCSTTCCCCCC--------------------------EECSSSSCEE--SSHHHHHHHHHHTTCSSCCCCCEECSSS
T ss_pred             CcccccceecCCCC--------------------------CcCCCCCCcc--CCHHHHHHHHHHhcCCcCCCcceECCCC
Confidence            57889999998654                          4478999999  7888999998876655    89999999


Q ss_pred             CccccchhhhcccccccccCCCCC
Q 041528          467 FRVFKSGQALGGHKRSHFVGGSED  490 (527)
Q Consensus       467 ~k~F~~~~~L~~H~r~H~~~~~~~  490 (527)
                      ++.|.+...|..|+++|.++....
T Consensus        54 ~~~f~~~~~L~~H~~~h~~~~~~~   77 (86)
T 1x6h_A           54 GKTFTRRNTMARHADNCAGPDGVE   77 (86)
T ss_dssp             CCEESCHHHHHHHHHHCCCCCSCC
T ss_pred             CChhCCHHHHHHHHHHccCCCCcc
Confidence            999999999999999999876543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=9.9e-13  Score=106.23  Aligned_cols=68  Identities=15%  Similarity=0.182  Sum_probs=48.3

Q ss_pred             ccCCCceecccCCCccCCchhHHHHhh-hh---cCCCCccccccccccccccccccccCCcccccccccCCCccccCCCC
Q 041528            5 NQKKKLFVCKYCNKRYPCGKSLGGHIR-TH---MNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRAN   80 (527)
Q Consensus         5 h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H---~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c   80 (527)
                      -+|++||.|..|++.|...+.|.+|++ +|   .+++||                         .|.+|++.|...    
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf-------------------------~C~~Cgk~F~~~----   63 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSY-------------------------VCVECNFLTKRY----   63 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCE-------------------------EETTTTEEESST----
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCc-------------------------CCCCCCcccCCH----
Confidence            357899999999999999999999997 58   446666                         444445445442    


Q ss_pred             Ccccccchh-hhhccCCCccccccc
Q 041528           81 PKRTRRFVD-SNTLTSQQEMVCKEC  104 (527)
Q Consensus        81 ~~~~~~~~H-~~~h~~~k~~~C~~C  104 (527)
                         ..|..| +++|++++||.|.++
T Consensus        64 ---~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           64 ---DALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             ---HHHHTHHHHTSTTCCCEEEEEC
T ss_pred             ---HHHHHHHHHhcCCCCCeeCCcc
Confidence               256667 677777777777763

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=5.7e-13  Score=101.09  Aligned_cols=57  Identities=28%  Similarity=0.587  Sum_probs=49.2

Q ss_pred             ccCCccccc--cccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccc
Q 041528          372 QKRSQFKCL--TCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNV  449 (527)
Q Consensus       372 ~~~~~~~C~--~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~  449 (527)
                      .++++|.|.  .||+.|.....|..|+++|++                                                
T Consensus        15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~------------------------------------------------   46 (73)
T 1f2i_G           15 PKMRPYACPVESCDRRFSRSDELTRHIRIHTG------------------------------------------------   46 (73)
T ss_dssp             CCCCCEECSSTTBCCEESSHHHHHHHHHHHHC------------------------------------------------
T ss_pred             CCCCccCCcCCCCCCccCCHHHHHHHHHhhCC------------------------------------------------
Confidence            356788886  488888888888888877766                                                


Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccc
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~  484 (527)
                              ++||.|++|++.|.+...|.+|+++|+
T Consensus        47 --------~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           47 --------QKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --------CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             --------CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence                    889999999999999999999999995

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=2.4e-12  Score=103.22  Aligned_cols=77  Identities=21%  Similarity=0.296  Sum_probs=65.2

Q ss_pred             CCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCc-cccCCCCCcccccchhhhhccC
Q 041528           17 NKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQS-GYVLRANPKRTRRFVDSNTLTS   95 (527)
Q Consensus        17 ~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~-~~~c~~c~~~~~~~~H~~~h~~   95 (527)
                      ...|.....|.+|++.|+++++|                         .|.+|++.| ...       ..|..|+++| +
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------~C~~C~k~F~~~~-------~~L~~H~~~h-~   59 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSV-------------------------SCPTCQAVGRKTI-------EGLKKHMENC-K   59 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCE-------------------------ECTTTCSCEESSH-------HHHHHHHHHH-C
T ss_pred             CCCCCCchHHHHHHHHhcCCCCc-------------------------CCCCCCCCcccCH-------HHHHHHHHHH-C
Confidence            45788899999999999999998                         555566666 542       3678899999 9


Q ss_pred             CCccccccccccccChhhHHHH-HhhhcCCCC
Q 041528           96 QQEMVCKECGKVFQSLKALCGH-MACHSEKDN  126 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H-~~~H~~~~~  126 (527)
                      +++|.|.+||+.|.+...|+.| +++|+++..
T Consensus        60 ~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           60 QEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            9999999999999999999999 899987543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=1.1e-12  Score=97.31  Aligned_cols=57  Identities=19%  Similarity=0.280  Sum_probs=48.1

Q ss_pred             cCCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKR  452 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~  452 (527)
                      +.++|.|.+||+.|. .+.|..|+++ ++                                                   
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~---------------------------------------------------   33 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CP---------------------------------------------------   33 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CS---------------------------------------------------
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cC---------------------------------------------------
Confidence            457788888888888 8888888766 54                                                   


Q ss_pred             cccCCCCCccCC-CcCccccchhhhcccccccccCC
Q 041528          453 LGSKKSKGHECP-FCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       453 ~~Ht~ekp~~C~-iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                           ++||.|+ +||++|..+..|..|+++|.+..
T Consensus        34 -----~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A           34 -----RLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             -----SSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             -----CcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence                 8899999 99999999999999999997654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.18  E-value=1.3e-11  Score=88.39  Aligned_cols=38  Identities=18%  Similarity=0.233  Sum_probs=28.1

Q ss_pred             cchhhhhccCCCccccccccccccChhhHHHHHhhhcC
Q 041528           86 RFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        86 ~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      |..|+++|++++||.|++|+++|.....|..|+++|++
T Consensus        20 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C           20 LNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             HHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             HHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            33344445556677888899999999999999988863

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.9e-11  Score=93.81  Aligned_cols=67  Identities=21%  Similarity=0.347  Sum_probs=55.1

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcc
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKR   83 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~   83 (527)
                      +|++++||+|.+|++.|.....|.+|+++|+++                                               
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~-----------------------------------------------   33 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAET-----------------------------------------------   33 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHH-----------------------------------------------
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc-----------------------------------------------
Confidence            488899999999999999999999998888531                                               


Q ss_pred             cccchhhhhccCCCccccccccccccChhhHHHHH-hhhcCCCCC
Q 041528           84 TRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHM-ACHSEKDNK  127 (527)
Q Consensus        84 ~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~-~~H~~~~~~  127 (527)
                                .++++|.|++|++.|....+|..|+ +.|.+..+.
T Consensus        34 ----------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A           34 ----------VAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             ----------TTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             ----------CCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence                      1355788999999999999999999 667766554

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.15  E-value=2.1e-12  Score=109.87  Aligned_cols=107  Identities=13%  Similarity=-0.006  Sum_probs=70.4

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhh---cCCCCccccccccccccc-----c------ccccccCCccccccccc
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTH---MNNGNSAEAEGEGEVKLN-----I------DKIFSGRNIKKDSCFEA   69 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H---~~~~p~~~C~~C~~~~~~-----~------~~~~~~~~~~~~~c~~c   69 (527)
                      ++++.++|.|..++...  ...+..|.+.|   ...+++ .|+.|++.+..     .      ...++  ..++|.|.+|
T Consensus         6 ~~~~~k~~~~~~k~~~~--~~s~ee~~~~~~l~~~~~~~-~c~~~~~~~~~~~~~~~~~~l~~h~~h~--~~~~~~C~~C   80 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFI--HVTLEELKRYHQLTPEQKRL-IRAIVKTLIHNPQLLDESSYLYRLLASK--AISQFVCPLC   80 (129)
T ss_dssp             CCTTCCGGGGCSSCEEE--ECCHHHHHHHTTSCHHHHHH-HHHHHHHHHHCGGGTTTHHHHHHHHHHH--HHCSEECTTT
T ss_pred             hcccccccccccCCeee--eecHHhhhccccCChhhCcc-cchhhhcccCCCcccCCHHHHHHHHHhC--CCCCeECCCC
Confidence            56777888777654332  23444453322   234556 77777654321     1      01111  1245677777


Q ss_pred             CCCccccCCCCCcccccchhhhhccCCCccccccccccccChhhHHHHHhhhcCC
Q 041528           70 GGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        70 ~~~~~~~c~~c~~~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      ++.|...       ..|..|+++|  ++||.|++||++|.+..+|.+|+++|++.
T Consensus        81 ~k~f~~~-------~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           81 LMPFSSS-------VSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CCEESSH-------HHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CcccCCH-------hHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            7777653       3677799999  89999999999999999999999999875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=6.3e-12  Score=96.36  Aligned_cols=68  Identities=18%  Similarity=0.204  Sum_probs=54.3

Q ss_pred             hHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcccccchhhh-hccCC-Cccccc
Q 041528           25 SLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRFVDSN-TLTSQ-QEMVCK  102 (527)
Q Consensus        25 ~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~~~H~~-~h~~~-k~~~C~  102 (527)
                      .|.+|+++|++++||                         .|.+|++.|...       ..|..|++ .|.+. ++|+|+
T Consensus         2 s~~~H~~~H~~~k~~-------------------------~C~~C~k~f~~~-------~~L~~H~~~~h~~~~~~~~C~   49 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPY-------------------------ECYICHARFTQS-------GTMKMHILQKHTENVAKFHCP   49 (77)
T ss_dssp             CCCCCCCCCSCCCSE-------------------------ECTTTCCEESCH-------HHHHHHHHHHSSSSCSSEECS
T ss_pred             CCCccccccCCCCCe-------------------------ECCCcCchhCCH-------HHHHHHHHHhcCCCCCccCCC
Confidence            466799999999998                         555566666542       36778987 68875 899999


Q ss_pred             cccccccChhhHHHHHhhhcCC
Q 041528          103 ECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus       103 ~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      +|++.|.....|..|+++|.+.
T Consensus        50 ~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           50 HCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             SSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCCccCCHHHHHHHHHHhCCC
Confidence            9999999999999999876543

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.12  E-value=4.4e-11  Score=81.57  Aligned_cols=42  Identities=21%  Similarity=0.367  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSC-SCCCC
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3999999999999999999999999999999999999 99887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.5e-11  Score=81.52  Aligned_cols=42  Identities=21%  Similarity=0.374  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~c   46 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPS-GPSSG   46 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCS-CCCCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.4e-11  Score=80.70  Aligned_cols=42  Identities=24%  Similarity=0.376  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|+.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPS-GPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSC-SCCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.2e-11  Score=81.21  Aligned_cols=42  Identities=26%  Similarity=0.438  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTS-GPSSG   46 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCC-CSCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=5e-11  Score=81.27  Aligned_cols=42  Identities=21%  Similarity=0.434  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPS-GPSSG   46 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCS-STTCC
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.6e-11  Score=81.43  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=40.7

Q ss_pred             CcccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            1 MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         1 m~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      |. +|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         4 ~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2epz_A            4 GS-SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPS-GPSSG   46 (46)
T ss_dssp             CS-SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCC-SSCCC
T ss_pred             CC-CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            44 899999999999999999999999999999999999 99887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.2e-11  Score=81.18  Aligned_cols=42  Identities=24%  Similarity=0.424  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPS-GPSSG   46 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCS-CSSCC
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.3e-11  Score=81.14  Aligned_cols=42  Identities=21%  Similarity=0.370  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCC-SCCCC
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.7e-11  Score=81.37  Aligned_cols=42  Identities=19%  Similarity=0.308  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2emm_A            5 SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPS-GPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTT-SSSCC
T ss_pred             CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.10  E-value=5e-11  Score=81.22  Aligned_cols=42  Identities=21%  Similarity=0.314  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2el4_A            5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPS-GPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCS-CCTTC
T ss_pred             cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.10  E-value=1.5e-11  Score=87.10  Aligned_cols=49  Identities=18%  Similarity=0.381  Sum_probs=45.9

Q ss_pred             CCCcccccCccccccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          437 GKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       437 ~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +|.|  .....|..|+++|++++||.|++||+.|.+...|..|+++|+++.
T Consensus         3 ~k~~--~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A            3 AKRA--KHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CCCC--SCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             cccc--CCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            5777  789999999999999999999999999999999999999999874

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.8e-11  Score=81.37  Aligned_cols=42  Identities=21%  Similarity=0.390  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPS-GPSSG   46 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCC-SCCCC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.10  E-value=5.4e-11  Score=81.13  Aligned_cols=42  Identities=24%  Similarity=0.388  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCS-SCCCC
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.09  E-value=5.8e-11  Score=80.92  Aligned_cols=42  Identities=19%  Similarity=0.354  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPS-GPSSG   46 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCS-CSSCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCc-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.09  E-value=5.8e-11  Score=80.93  Aligned_cols=42  Identities=19%  Similarity=0.299  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPS-GPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCC-SCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            4999999999999999999999999999999999999 99887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.8e-11  Score=80.95  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPS-GPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSS-CCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.09  E-value=5.5e-11  Score=81.03  Aligned_cols=42  Identities=19%  Similarity=0.395  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~c   46 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPS-GPSSG   46 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCC-SSSCC
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.5e-11  Score=81.05  Aligned_cols=42  Identities=21%  Similarity=0.404  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCS-SCCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.6e-11  Score=80.99  Aligned_cols=42  Identities=26%  Similarity=0.427  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPS-GPSSG   46 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCC-CCCCC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.9e-11  Score=81.33  Aligned_cols=42  Identities=24%  Similarity=0.339  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLS-GPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCC-CSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCC-CCCCC
Confidence            3999999999999999999999999999999999999 99887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.5e-11  Score=80.65  Aligned_cols=42  Identities=26%  Similarity=0.500  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|++|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2eme_A            5 SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPS-GPSSG   46 (46)
T ss_dssp             CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCC-SSCCC
T ss_pred             CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=5.7e-11  Score=80.98  Aligned_cols=43  Identities=19%  Similarity=0.322  Sum_probs=40.6

Q ss_pred             CcccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            1 MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         1 m~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      |. +|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         4 ~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2em5_A            4 GS-SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPS-GPSSG   46 (46)
T ss_dssp             CC-CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCS-SCCCC
T ss_pred             cC-CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            44 899999999999999999999999999999999999 99887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.5e-11  Score=81.03  Aligned_cols=42  Identities=21%  Similarity=0.400  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPS-GPSSG   46 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCS-CSCCC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6e-11  Score=80.85  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPS-GPSSG   46 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSS-SCCCC
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.8e-11  Score=80.94  Aligned_cols=42  Identities=19%  Similarity=0.341  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~c   46 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCS-CCSCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.08  E-value=3.9e-11  Score=85.92  Aligned_cols=55  Identities=20%  Similarity=0.225  Sum_probs=47.3

Q ss_pred             ccccccCCCccccCCCCCcccccchhhhhccCCCccccccccccccChhhHHHHHhhhcCCC
Q 041528           64 DSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        64 ~~c~~c~~~~~~~c~~c~~~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      |.|..|++.|...       ..|..|+++|+++++|.|++|+++|.+..+|..|+++|.+++
T Consensus         2 ~~C~~C~~~f~~~-------~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            2 YICEECGIRXKKP-------SMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CBCTTTCCBCSSH-------HHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcCCCCcCcCCCH-------HHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            5677777777653       367789999999999999999999999999999999998764

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.08  E-value=6.6e-11  Score=80.60  Aligned_cols=42  Identities=24%  Similarity=0.398  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPS-GPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCC-STTCC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6e-11  Score=80.84  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCS-CSSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.3e-11  Score=80.71  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPS-GPSSG   46 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCS-CCCCC
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=6.8e-11  Score=89.40  Aligned_cols=38  Identities=21%  Similarity=0.343  Sum_probs=30.5

Q ss_pred             ccchhhhhccCCCccccccccccccChhhHHHHHhhhc
Q 041528           85 RRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        85 ~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      .|..|+++|.++++|.|++||++|.+...|.+|+++|+
T Consensus        36 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           36 ELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             HHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             HHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            44456666666777889999999999999999999884

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=6.1e-11  Score=80.81  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=40.3

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPS-GPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCC-SSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCC-CCCCC
Confidence            4899999999999999999999999999999999999 99887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.8e-11  Score=80.54  Aligned_cols=42  Identities=19%  Similarity=0.374  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHS-GPSSG   46 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSC-CSCCC
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.5e-11  Score=81.06  Aligned_cols=42  Identities=17%  Similarity=0.398  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2eoo_A            5 SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSS-GPSSG   46 (46)
T ss_dssp             CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSS-CCSCC
T ss_pred             CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.1e-11  Score=80.46  Aligned_cols=42  Identities=24%  Similarity=0.363  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHS-GPSSG   46 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCS-CCCCC
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.3e-11  Score=80.74  Aligned_cols=42  Identities=19%  Similarity=0.356  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~c   46 (46)
T 2ep2_A            5 SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPS-GPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSC-CSCCC
T ss_pred             CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.5e-11  Score=81.03  Aligned_cols=42  Identities=17%  Similarity=0.391  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~c   46 (46)
T 2emh_A            5 SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPS-GPSSG   46 (46)
T ss_dssp             CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCS-SSCCC
T ss_pred             CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.8e-11  Score=80.93  Aligned_cols=42  Identities=26%  Similarity=0.398  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2ytg_A            5 SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSS-CSCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.5e-11  Score=81.03  Aligned_cols=42  Identities=21%  Similarity=0.390  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2eoe_A            5 SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPS-GPSSG   46 (46)
T ss_dssp             SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSC-SSCCC
T ss_pred             CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.08  E-value=2.2e-11  Score=91.96  Aligned_cols=57  Identities=25%  Similarity=0.279  Sum_probs=52.2

Q ss_pred             CCCCCCccccc--CCCCcccccCccccccccccCCCCCccCCC--cCccccchhhhccccccc
Q 041528          425 PMPNSKFCKSV--NGKTPIAQNLSTNVDKRLGSKKSKGHECPF--CFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       425 ~~~~~~~~c~~--C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~i--C~k~F~~~~~L~~H~r~H  483 (527)
                      ......|.|.+  |+|.|  .....|..|+++|++++||.|++  |+++|.+...|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f--~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTY--FKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEE--SSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCcccc--CCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            44556788988  99999  89999999999999999999976  999999999999999998

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.8e-11  Score=80.93  Aligned_cols=42  Identities=21%  Similarity=0.357  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPS-GPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCC-SCCCC
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=6.6e-11  Score=80.62  Aligned_cols=42  Identities=24%  Similarity=0.353  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCS-GPSSG   46 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSS-CCSCC
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.7e-11  Score=80.62  Aligned_cols=42  Identities=21%  Similarity=0.368  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPS-GPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSS-CSSCC
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.8e-11  Score=80.56  Aligned_cols=42  Identities=19%  Similarity=0.396  Sum_probs=40.0

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~c   46 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPS-GPSSG   46 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCS-SCSCC
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.6e-11  Score=81.05  Aligned_cols=42  Identities=21%  Similarity=0.334  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPS-GPSSG   46 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCC-CCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.5e-11  Score=80.65  Aligned_cols=42  Identities=21%  Similarity=0.408  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2ytr_A            5 SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCC-CSCCC
T ss_pred             cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=7.1e-11  Score=80.48  Aligned_cols=42  Identities=24%  Similarity=0.310  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNS-GPSSG   46 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCC-CTTCC
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            4999999999999999999999999999999999999 99877

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6e-11  Score=80.84  Aligned_cols=42  Identities=21%  Similarity=0.389  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|++|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPS-GPSSG   46 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSS-CCSCC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=1.5e-11  Score=98.34  Aligned_cols=68  Identities=13%  Similarity=-0.011  Sum_probs=45.3

Q ss_pred             CccccccccccccCcccccccccc-CCCCCCC--CcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccc
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHTAS-HSKINGC--CESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDK  451 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~~~-H~~~~~C--~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h  451 (527)
                      ..|.|.+|++.|.....|..|+++ |+++..-  ..|                    ..|.|.+||+.|  .....|+.|
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c--------------------~~~~C~~C~k~f--~~~~~L~~H   81 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC--------------------YWEECPREGKSF--KAKYKLVNH   81 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC--------------------CCTTCSSTTCCC--SSHHHHHHH
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccce--------------------eccCCCCCCccc--CCHHHHHHH
Confidence            458899999999999999999998 8875421  100                    113455666666  555556666


Q ss_pred             ccccCCCCCccCC
Q 041528          452 RLGSKKSKGHECP  464 (527)
Q Consensus       452 ~~~Ht~ekp~~C~  464 (527)
                      +++|++++||.|+
T Consensus        82 ~~~H~~~k~~~C~   94 (95)
T 2ej4_A           82 IRVHTGEKSGPSS   94 (95)
T ss_dssp             HHHHHTCCCCSSC
T ss_pred             HHhcCCCCCCCCC
Confidence            6666666666654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.4e-11  Score=81.12  Aligned_cols=42  Identities=21%  Similarity=0.371  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|+++++|.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPS-GPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCC-SCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            4899999999999999999999999999999999999 99887

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.8e-11  Score=80.01  Aligned_cols=42  Identities=26%  Similarity=0.479  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPS-GPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCC-SCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCC-CCCCC
Confidence            4899999999999999999999999999999999999 99887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=7.4e-11  Score=80.38  Aligned_cols=42  Identities=26%  Similarity=0.480  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~C   46 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPS-GPSSG   46 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCS-CCCCC
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 99887

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=4.6e-11  Score=84.61  Aligned_cols=30  Identities=30%  Similarity=0.622  Sum_probs=24.1

Q ss_pred             ccCCccccccccccccCccccccccc-cCCC
Q 041528          372 QKRSQFKCLTCNKVFHSPRSLWGHTA-SHSK  401 (527)
Q Consensus       372 ~~~~~~~C~~Cgk~F~~~~~L~~H~~-~H~~  401 (527)
                      ..+++|.|.+|++.|.....|..|++ +|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   38 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTS   38 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            35678888888888888888888876 7776

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7e-11  Score=80.51  Aligned_cols=42  Identities=24%  Similarity=0.420  Sum_probs=40.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   46 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCS-SSCCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCC-CCCCC
Confidence            4899999999999999999999999999999999999 99887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.8e-11  Score=79.76  Aligned_cols=42  Identities=19%  Similarity=0.332  Sum_probs=39.7

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~~   46 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPS-GPSSG   46 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCC-CTTCC
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 88865

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.05  E-value=1.7e-11  Score=89.59  Aligned_cols=59  Identities=17%  Similarity=0.204  Sum_probs=48.7

Q ss_pred             cccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccccccCCCCCccCCCcCcccc
Q 041528          392 LWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFK  471 (527)
Q Consensus       392 L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~  471 (527)
                      |..|+++|+++++                          |.|++||+.|  .....|.   ++|++++||.|++||+.|.
T Consensus         2 L~~h~~~H~~~k~--------------------------~~C~~C~k~F--~~~~~l~---~~H~~~k~~~C~~C~k~f~   50 (62)
T 1vd4_A            2 IETDERDSTNRAS--------------------------FKCPVCSSTF--TDLEANQ---LFDPMTGTFRCTFCHTEVE   50 (62)
T ss_dssp             CCCCSSSCCSSSE--------------------------EECSSSCCEE--EHHHHHH---HEETTTTEEBCSSSCCBCE
T ss_pred             hhhHHHHcCCCCC--------------------------ccCCCCCchh--ccHHHhH---hhcCCCCCEECCCCCCccc
Confidence            7789999998664                          4477899999  5555555   7899999999999999999


Q ss_pred             chhhhccccc
Q 041528          472 SGQALGGHKR  481 (527)
Q Consensus       472 ~~~~L~~H~r  481 (527)
                      ...++..|..
T Consensus        51 ~~~~~~~~~~   60 (62)
T 1vd4_A           51 EDESAMPKKD   60 (62)
T ss_dssp             ECTTCSCCCC
T ss_pred             cCcccccccc
Confidence            9998887653

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=79.60  Aligned_cols=42  Identities=26%  Similarity=0.355  Sum_probs=40.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhh-hhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIR-THMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~~C~~C   45 (527)
                      ++|++++||.|.+|++.|.....|.+|++ +|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~-~C~~C   47 (47)
T 2epx_A            5 SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPS-GPSSG   47 (47)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSS-SCCCC
T ss_pred             cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCC-CCCCC
Confidence            38999999999999999999999999999 99999999 99887

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=3.1e-11  Score=91.14  Aligned_cols=71  Identities=11%  Similarity=0.071  Sum_probs=38.0

Q ss_pred             chhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcccccchhhhhccCCCccccc
Q 041528           23 GKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCK  102 (527)
Q Consensus        23 ~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~~~H~~~h~~~k~~~C~  102 (527)
                      ...|..|+++|++++|| .|+.|++.|......-.   .++|.|.+|++.|...       ..|..|+++|++++||+|+
T Consensus         3 ~~~l~~H~~~h~~~~~~-~C~~C~k~f~~~~~l~~---~~~~~C~~C~~~f~~~-------~~l~~H~~~H~~~~~~~C~   71 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQ-KCSKCGIIFIRRSTLSR---RKTPMCEKCRKDSCQE-------AALNKDEGNESGKKTSGPS   71 (73)
T ss_dssp             CCSCCCCCCCCCCCSEE-ECSSSCCEEECCCCCCC---SSSCCCHHHHHTCSCC-------CSSCCCSSCCCCCCCSSCC
T ss_pred             chhHHHHHHHhCCCCCe-eCCcccchhCCHHHhCc---CCCCCCCCCChhhcCH-------HHHHHHHHhhcCCCCCCCC
Confidence            34455555556555555 55555433322200000   2334566666666542       2566677777777777777


Q ss_pred             cc
Q 041528          103 EC  104 (527)
Q Consensus       103 ~C  104 (527)
                      +|
T Consensus        72 ~C   73 (73)
T 2ctu_A           72 SG   73 (73)
T ss_dssp             CC
T ss_pred             CC
Confidence            76

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.4e-10  Score=78.93  Aligned_cols=42  Identities=26%  Similarity=0.473  Sum_probs=39.7

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|+++++|.|.+|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~~   46 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPS-GPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSS-CSSCC
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            3899999999999999999999999999999999999 88865

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.01  E-value=1.1e-10  Score=75.41  Aligned_cols=36  Identities=31%  Similarity=0.528  Sum_probs=34.3

Q ss_pred             cccccCCCCCccCCCcCccccchhhhcccccccccC
Q 041528          451 KRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       451 h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      |+++|++++||.|++|++.|.+...|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            788999999999999999999999999999999874

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=1.5e-10  Score=78.44  Aligned_cols=43  Identities=19%  Similarity=0.443  Sum_probs=40.7

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEG   46 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~   46 (527)
                      .+|++++||.|.+|++.|.....|.+|+++|+++++| .|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~-~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK-SGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCC-CCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCC-CCcCCC
Confidence            3799999999999999999999999999999999999 999884

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2e-10  Score=76.11  Aligned_cols=41  Identities=24%  Similarity=0.454  Sum_probs=38.6

Q ss_pred             CcccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccc
Q 041528            1 MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEA   42 (527)
Q Consensus         1 m~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C   42 (527)
                      |.++|++++||.|.+|++.|.....|.+|+++|++++|| .|
T Consensus         1 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C   41 (41)
T 2ept_A            1 GSSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS-SG   41 (41)
T ss_dssp             CCSSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCS-CC
T ss_pred             CCCccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCc-CC
Confidence            557999999999999999999999999999999999999 66

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=1.6e-10  Score=79.53  Aligned_cols=43  Identities=16%  Similarity=0.273  Sum_probs=40.4

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccc
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGE   47 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~   47 (527)
                      .|.++++|.|.+|++.|.....|.+|+++|++++|| .|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPY-SSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCC-CSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCc-cCCCCCC
Confidence            578899999999999999999999999999999999 9999964

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.98  E-value=2e-10  Score=83.09  Aligned_cols=55  Identities=16%  Similarity=0.175  Sum_probs=46.9

Q ss_pred             cccccccCCCccccCCCCCcccccchhhhhccCCCccccccccccccChhhHHHHH-hhhcCC
Q 041528           63 KDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHM-ACHSEK  124 (527)
Q Consensus        63 ~~~c~~c~~~~~~~c~~c~~~~~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~-~~H~~~  124 (527)
                      +|.|.+|++.|...       ..|..|+++|+++++|.|++|+++|.+...|..|+ ++|.++
T Consensus         2 ~~~C~~C~~~f~~~-------~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQ-------EHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCH-------HHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCH-------HHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            45777777777653       36778999999999999999999999999999997 788865

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.97  E-value=3e-10  Score=90.62  Aligned_cols=70  Identities=17%  Similarity=0.241  Sum_probs=51.6

Q ss_pred             CCceecccCCCccCCchhHHHHhhh-hcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCccccc
Q 041528            8 KKLFVCKYCNKRYPCGKSLGGHIRT-HMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRR   86 (527)
Q Consensus         8 ~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~   86 (527)
                      ...|.|..|++.|.....|.+|+++ |.++++. .+..|                                         
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~-~~~~c-----------------------------------------   60 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ-NNHVC-----------------------------------------   60 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTC-SCCCC-----------------------------------------
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCC-Cccce-----------------------------------------
Confidence            3457899999999999999999997 8887765 21111                                         


Q ss_pred             chhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           87 FVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        87 ~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                                ++|.|++|+++|....+|..|+++|++++++.+
T Consensus        61 ----------~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           61 ----------YWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             ----------CCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             ----------eccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence                      136777777777777777777777777776644

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.97  E-value=3.4e-10  Score=75.34  Aligned_cols=40  Identities=20%  Similarity=0.410  Sum_probs=37.8

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~   42 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGP-SSG   42 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSC-CCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 774

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.1e-10  Score=77.26  Aligned_cols=41  Identities=20%  Similarity=0.387  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPS-GPSS   45 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSC-TTSC
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.7e-10  Score=75.79  Aligned_cols=38  Identities=26%  Similarity=0.273  Sum_probs=35.5

Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      .|+++|++++||.|++|+++|.+...|..|+++|+++.
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   38 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG   38 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCS
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCC
Confidence            47889999999999999999999999999999998764

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.1e-10  Score=76.64  Aligned_cols=40  Identities=25%  Similarity=0.444  Sum_probs=38.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~   44 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPS-GPS   44 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCC-CCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 876

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.3e-10  Score=77.10  Aligned_cols=41  Identities=20%  Similarity=0.367  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPS-GPSS   45 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCC-SSCC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8864

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=3.6e-10  Score=79.93  Aligned_cols=45  Identities=20%  Similarity=0.392  Sum_probs=41.1

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhh-hhcCCCCccccccccccc
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIR-THMNNGNSAEAEGEGEVK   49 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~~C~~C~~~~   49 (527)
                      .|++++||.|.+|++.|.....|.+|++ +|++++|| .|+.|++.|
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~-~C~~C~k~F   51 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH-KCQVWVSGP   51 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCC-CSSSSCCSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCc-cCCCCCCCC
Confidence            6788999999999999999999999997 99999999 888886544

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.96  E-value=3.5e-10  Score=76.95  Aligned_cols=41  Identities=24%  Similarity=0.454  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSS-SSCC
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=3.6e-10  Score=76.93  Aligned_cols=41  Identities=22%  Similarity=0.386  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCC-CCCC
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=3.8e-10  Score=76.83  Aligned_cols=41  Identities=17%  Similarity=0.277  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCS-SCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4e-10  Score=76.66  Aligned_cols=41  Identities=20%  Similarity=0.339  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2enf_A            5 SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCC-CCSC
T ss_pred             cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.4e-10  Score=76.45  Aligned_cols=41  Identities=22%  Similarity=0.434  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~-~C~~   45 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSS-CCCC
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCc-CCCC
Confidence            3899999999999999999999999999999999999 8864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.9e-10  Score=76.19  Aligned_cols=41  Identities=22%  Similarity=0.370  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|+++++|.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPS-GPSS   45 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCC-SSSC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.5e-10  Score=76.41  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~~   45 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPS-GPSS   45 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCS-CSCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.4e-10  Score=76.45  Aligned_cols=41  Identities=32%  Similarity=0.507  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPS-GPSS   45 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCC-SCCC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.4e-10  Score=76.47  Aligned_cols=41  Identities=24%  Similarity=0.459  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|++
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~-~C~~   45 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCC-CSCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.6e-10  Score=76.35  Aligned_cols=41  Identities=22%  Similarity=0.412  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPS-GPSS   45 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCC-CCCC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5e-10  Score=76.17  Aligned_cols=41  Identities=20%  Similarity=0.373  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|+++++|.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPS-GPSS   45 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCC-SCCC
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8763

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.7e-10  Score=74.61  Aligned_cols=40  Identities=15%  Similarity=0.371  Sum_probs=37.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|.
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~   42 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGP-SSG   42 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSC-CCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 763

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.95  E-value=4.4e-10  Score=75.29  Aligned_cols=41  Identities=20%  Similarity=0.408  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|..|++.|.....|.+|+++|++++|| .|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSG-PSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCS-SSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCc-cCCC
Confidence            4899999999999999999999999999999999999 8864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.3e-10  Score=76.48  Aligned_cols=41  Identities=24%  Similarity=0.402  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2eow_A            5 SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPS-GPSS   45 (46)
T ss_dssp             CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCS-CTTC
T ss_pred             CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.3e-10  Score=76.50  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2yti_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCS-STTC
T ss_pred             cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.2e-10  Score=76.11  Aligned_cols=41  Identities=27%  Similarity=0.497  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPS-GPSS   45 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCS-SCCC
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.6e-10  Score=76.32  Aligned_cols=41  Identities=27%  Similarity=0.412  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPS-GPSS   45 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSS-CCCC
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5e-10  Score=76.20  Aligned_cols=41  Identities=22%  Similarity=0.443  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPS-GPSS   45 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCC-CTTC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.7e-10  Score=76.33  Aligned_cols=40  Identities=28%  Similarity=0.423  Sum_probs=38.0

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~   44 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSS-GPS   44 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSC-STT
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 875

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.2e-10  Score=76.08  Aligned_cols=41  Identities=22%  Similarity=0.395  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2yrj_A            5 SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSS-CSCC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3.4e-10  Score=75.33  Aligned_cols=38  Identities=29%  Similarity=0.328  Sum_probs=35.5

Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      .|+++|++++||.|++|+++|.+...|..|+++|+++.
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   38 (42)
T 2eos_A            1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG   38 (42)
T ss_dssp             CCCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCS
T ss_pred             CCCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCC
Confidence            37889999999999999999999999999999998764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=2.4e-10  Score=78.65  Aligned_cols=29  Identities=38%  Similarity=0.592  Sum_probs=25.0

Q ss_pred             cCCccccccccccccCccccccccccCCC
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTASHSK  401 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~H~~  401 (527)
                      .+++|.|.+|++.|.....|..|+++|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSG   37 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCS
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCC
Confidence            56789999999999999999999888876

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=5e-10  Score=76.17  Aligned_cols=41  Identities=20%  Similarity=0.373  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~   45 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCS-SCCC
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=5e-10  Score=75.29  Aligned_cols=40  Identities=25%  Similarity=0.426  Sum_probs=37.8

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~   44 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGP-SSG   44 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSS-CCC
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 774

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=6e-10  Score=75.77  Aligned_cols=41  Identities=34%  Similarity=0.662  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcC-CCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMN-NGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++ ++|| .|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~-~C~~   46 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSG-PSSG   46 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTS-SSCC
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCC-CCCC
Confidence            389999999999999999999999999999999 9999 8863

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.93  E-value=5.4e-10  Score=74.32  Aligned_cols=41  Identities=24%  Similarity=0.470  Sum_probs=38.2

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      |+++|+++++|+|++||++|.+..+|..|+++|.+++++.+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            67899999999999999999999999999999999988754

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.5e-10  Score=76.21  Aligned_cols=39  Identities=23%  Similarity=0.201  Sum_probs=36.5

Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccccCCC
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~~  488 (527)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG   40 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC
Confidence            588999999999999999999999999999999998754

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.3e-10  Score=75.65  Aligned_cols=40  Identities=18%  Similarity=0.370  Sum_probs=37.8

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~   44 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGP-SSG   44 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSC-CCC
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 774

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.93  E-value=4.3e-10  Score=76.51  Aligned_cols=38  Identities=18%  Similarity=0.229  Sum_probs=35.1

Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~   39 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK   39 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSS
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCC
Confidence            58889999999999999999999999999999998765

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=5.8e-10  Score=74.99  Aligned_cols=40  Identities=23%  Similarity=0.432  Sum_probs=37.8

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~   44 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGP-SSG   44 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCS-CCC
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 774

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.9e-10  Score=76.20  Aligned_cols=41  Identities=22%  Similarity=0.408  Sum_probs=38.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~-~C~~   45 (46)
T 2eor_A            5 SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPS-GPSS   45 (46)
T ss_dssp             SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCS-SSTT
T ss_pred             cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCC-CCCC
Confidence            3899999999999999999999999999999999999 8864

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=6.5e-10  Score=74.79  Aligned_cols=40  Identities=20%  Similarity=0.434  Sum_probs=37.8

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~   44 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGP-SSG   44 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCT-TCC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCc-CCC
Confidence            3899999999999999999999999999999999999 774

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=5.8e-10  Score=75.85  Aligned_cols=40  Identities=20%  Similarity=0.390  Sum_probs=38.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~   44 (46)
T 2yto_A            5 SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHS-GPS   44 (46)
T ss_dssp             CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBT-TTB
T ss_pred             cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 876

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.7e-10  Score=76.34  Aligned_cols=38  Identities=21%  Similarity=0.306  Sum_probs=35.7

Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      .|+++|++++||.|++|++.|.+...|.+|+++|+++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK   39 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCC
Confidence            58899999999999999999999999999999998764

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.8e-10  Score=76.27  Aligned_cols=38  Identities=21%  Similarity=0.284  Sum_probs=34.7

Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      .|+++|++++||.|++|+++|.+...|.+|+++|+++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK   39 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCC
Confidence            57889999999999999999999999999999998764

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=6.3e-10  Score=74.02  Aligned_cols=39  Identities=26%  Similarity=0.577  Sum_probs=37.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEA   42 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C   42 (527)
                      ++|++++||+|.+|++.|...+.|.+|+++|++++|| .|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS-SG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST-TC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCC-CC
Confidence            3899999999999999999999999999999999999 66

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=6.3e-10  Score=82.27  Aligned_cols=32  Identities=19%  Similarity=0.377  Sum_probs=23.5

Q ss_pred             cCCCccccc-cccccccChhhHHHHHhhhcCCC
Q 041528           94 TSQQEMVCK-ECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        94 ~~~k~~~C~-~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      ++++||+|+ +||++|...+.|..|+++|.+..
T Consensus        32 ~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A           32 CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            445566777 78888888888888888876543

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=8e-10  Score=74.35  Aligned_cols=40  Identities=20%  Similarity=0.411  Sum_probs=37.6

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~   44 (44)
T 2yu5_A            5 SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP-SSG   44 (44)
T ss_dssp             CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSS-CCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 773

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.3e-10  Score=74.35  Aligned_cols=39  Identities=23%  Similarity=0.471  Sum_probs=37.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEA   42 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C   42 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS-SG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSS-CC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCC-CC
Confidence            4899999999999999999999999999999999999 66

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.5e-10  Score=74.25  Aligned_cols=39  Identities=31%  Similarity=0.511  Sum_probs=37.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEA   42 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C   42 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C   42 (42)
T 2ytb_A            4 GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS-SG   42 (42)
T ss_dssp             CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC-CC
T ss_pred             cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCC-CC
Confidence            4899999999999999999999999999999999999 66

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.6e-10  Score=75.55  Aligned_cols=41  Identities=24%  Similarity=0.479  Sum_probs=38.5

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSG-PSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCC-CSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCC-CCCC
Confidence            4899999999999999999999999999999999999 8863

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.1e-10  Score=75.76  Aligned_cols=40  Identities=23%  Similarity=0.473  Sum_probs=38.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~C~   44 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLS-GPS   44 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSS-SCC
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.2e-10  Score=76.53  Aligned_cols=38  Identities=18%  Similarity=0.282  Sum_probs=35.2

Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      .|+++|++++||.|++|++.|.+...|.+|+++|+++.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK   39 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCC
Confidence            58889999999999999999999999999999998764

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=7.4e-10  Score=74.52  Aligned_cols=40  Identities=18%  Similarity=0.275  Sum_probs=37.8

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|+++++|.|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~   44 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGP-SSG   44 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCC-CCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 774

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.7e-10  Score=76.83  Aligned_cols=39  Identities=21%  Similarity=0.252  Sum_probs=35.8

Q ss_pred             cccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          449 VDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       449 ~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +.|+++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2ep2_A            1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK   39 (46)
T ss_dssp             CCSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCC
T ss_pred             CCCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            368899999999999999999999999999999998764

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=8.6e-10  Score=73.29  Aligned_cols=41  Identities=22%  Similarity=0.400  Sum_probs=38.0

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      |+++|++++||+|++|+++|.+..+|.+|+++|.+++++.+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            67899999999999999999999999999999999887643

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.90  E-value=8e-10  Score=73.44  Aligned_cols=39  Identities=23%  Similarity=0.444  Sum_probs=37.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEA   42 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C   42 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~-~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS-SG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCC-CC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCC-CC
Confidence            4899999999999999999999999999999999999 66

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7.9e-10  Score=75.88  Aligned_cols=42  Identities=24%  Similarity=0.408  Sum_probs=39.9

Q ss_pred             ccccCCCceecc--cCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCK--YCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||+|.  .|++.|.....|.+|+++|++++|| .|+.|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPS-GPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSC-SSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCC-CCCCC
Confidence            489999999998  8999999999999999999999999 99887

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=4.8e-10  Score=75.44  Aligned_cols=39  Identities=21%  Similarity=0.298  Sum_probs=36.2

Q ss_pred             cccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          449 VDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       449 ~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +.|+++|++++||.|++|+++|.+...|..|+++|+++.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (44)
T 2emb_A            1 GSSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKS   39 (44)
T ss_dssp             CCCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCC
T ss_pred             CCcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCC
Confidence            358899999999999999999999999999999998764

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6e-10  Score=75.80  Aligned_cols=41  Identities=24%  Similarity=0.480  Sum_probs=38.6

Q ss_pred             CcccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            1 MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         1 m~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      |. +|++++||+|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         4 ~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~   44 (46)
T 2emz_A            4 GS-SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSS-GPS   44 (46)
T ss_dssp             CS-CSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCC-CSC
T ss_pred             Cc-CCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCC-CCC
Confidence            44 899999999999999999999999999999999999 876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6e-10  Score=75.78  Aligned_cols=38  Identities=18%  Similarity=0.253  Sum_probs=34.7

Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      .|+++|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK   39 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCC
Confidence            58889999999999999999999999999999998764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1e-09  Score=74.61  Aligned_cols=43  Identities=23%  Similarity=0.389  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|+|++||++|.+..+|.+|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887654

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.3e-10  Score=75.30  Aligned_cols=40  Identities=23%  Similarity=0.417  Sum_probs=38.1

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~-~C~   44 (46)
T 2eq3_A            5 SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPS-GPS   44 (46)
T ss_dssp             CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCC-CSC
T ss_pred             cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 876

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.9e-10  Score=75.16  Aligned_cols=40  Identities=28%  Similarity=0.458  Sum_probs=37.9

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~-~C~   44 (46)
T 2en3_A            5 SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPS-GPS   44 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCS-SCS
T ss_pred             cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCC-CCC
Confidence            3899999999999999999999999999999999999 775

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=9.7e-10  Score=74.72  Aligned_cols=43  Identities=26%  Similarity=0.432  Sum_probs=39.9

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|+++|....+|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.87  E-value=1.1e-09  Score=74.48  Aligned_cols=43  Identities=23%  Similarity=0.413  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|+++|....+|.+|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887653

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.2e-09  Score=74.24  Aligned_cols=43  Identities=26%  Similarity=0.450  Sum_probs=39.8

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|+|++|++.|.+..+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887654

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.5e-10  Score=73.34  Aligned_cols=40  Identities=20%  Similarity=0.414  Sum_probs=37.6

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKM  128 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~  128 (527)
                      |+++|++++||+|++|+++|.+...|..|+++|++++++.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            7889999999999999999999999999999999988763

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.2e-09  Score=74.19  Aligned_cols=43  Identities=26%  Similarity=0.446  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|+|++|+++|....+|.+|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887553

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=74.47  Aligned_cols=43  Identities=21%  Similarity=0.386  Sum_probs=39.5

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|+++|....+|.+|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3889999999999999999999999999999999999887553

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=74.51  Aligned_cols=43  Identities=23%  Similarity=0.403  Sum_probs=39.8

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|++.|.+..+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887654

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1e-09  Score=73.79  Aligned_cols=42  Identities=29%  Similarity=0.471  Sum_probs=38.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+..+|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999887643

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.3e-09  Score=74.01  Aligned_cols=43  Identities=23%  Similarity=0.428  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|.|++|+++|.+..+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887653

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.5e-09  Score=73.71  Aligned_cols=43  Identities=21%  Similarity=0.376  Sum_probs=39.8

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|+|++|++.|.+..+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887654

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.2e-09  Score=73.38  Aligned_cols=41  Identities=24%  Similarity=0.340  Sum_probs=38.4

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      |+++|++++||+|++||++|.+..+|..|+++|++++++.+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP   41 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            68899999999999999999999999999999999988754

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.3e-09  Score=74.11  Aligned_cols=43  Identities=23%  Similarity=0.408  Sum_probs=39.6

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++||++|.+..+|.+|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887543

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.2e-09  Score=73.34  Aligned_cols=42  Identities=29%  Similarity=0.457  Sum_probs=38.9

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|+++++|.|++||+.|.+...|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            488999999999999999999999999999999999888743

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8e-10  Score=74.34  Aligned_cols=39  Identities=18%  Similarity=0.372  Sum_probs=37.2

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEA   42 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C   42 (527)
                      ++|++++||.|.+|++.|.....|.+|+++|++++|| .|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~-~C   43 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGP-SS   43 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCC-SC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCC-CC
Confidence            3899999999999999999999999999999999999 76

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=74.07  Aligned_cols=42  Identities=24%  Similarity=0.426  Sum_probs=39.2

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      |+++|++++||+|++|++.|.+..+|.+|+++|.+++++.+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            788999999999999999999999999999999999887654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=4.5e-10  Score=72.67  Aligned_cols=33  Identities=18%  Similarity=0.188  Sum_probs=30.7

Q ss_pred             ccCCCCCccCCC--cCccccchhhhcccccccccC
Q 041528          454 GSKKSKGHECPF--CFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       454 ~Ht~ekp~~C~i--C~k~F~~~~~L~~H~r~H~~~  486 (527)
                      .++++|||+|++  |+|+|.++.+|++||++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            478999999987  999999999999999999975

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.2e-09  Score=74.32  Aligned_cols=42  Identities=21%  Similarity=0.380  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||.|++||++|.+..+|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP   43 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCC
Confidence            588999999999999999999999999999999999988754

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=73.99  Aligned_cols=43  Identities=28%  Similarity=0.467  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|+++|.+..+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.4e-09  Score=73.97  Aligned_cols=43  Identities=21%  Similarity=0.357  Sum_probs=39.8

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|+++|....+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.6e-09  Score=72.86  Aligned_cols=39  Identities=23%  Similarity=0.362  Sum_probs=36.9

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEA   42 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C   42 (527)
                      ++|++++||.|.+|++.|...+.|.+|+++|++++|| .|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~-~~   43 (44)
T 2epv_A            5 SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGP-SS   43 (44)
T ss_dssp             CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCC-CC
T ss_pred             cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCC-CC
Confidence            3899999999999999999999999999999999999 54

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.2e-09  Score=73.39  Aligned_cols=42  Identities=19%  Similarity=0.401  Sum_probs=38.8

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++|+++|.+..+|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            488999999999999999999999999999999999887643

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=73.17  Aligned_cols=42  Identities=21%  Similarity=0.387  Sum_probs=38.8

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|+++++|+|++|+++|.+..+|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999887643

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=4.6e-10  Score=72.36  Aligned_cols=36  Identities=14%  Similarity=0.381  Sum_probs=33.4

Q ss_pred             ccccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          452 RLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       452 ~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +++|++++||.|++|+++|.+..+|..|+++|+++.
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            467999999999999999999999999999999864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.4e-09  Score=73.91  Aligned_cols=43  Identities=21%  Similarity=0.370  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|+++|.+..+|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887653

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=74.11  Aligned_cols=43  Identities=21%  Similarity=0.377  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|+++|.+..+|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887653

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.5e-09  Score=73.71  Aligned_cols=43  Identities=23%  Similarity=0.419  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|+++|.+..+|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            4889999999999999999999999999999999999887653

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.7e-09  Score=73.51  Aligned_cols=43  Identities=19%  Similarity=0.337  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|+|++|+++|.+...|..|+++|++++++.+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887653

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.6e-09  Score=73.64  Aligned_cols=43  Identities=23%  Similarity=0.450  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|.|++||++|.+..+|.+|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887553

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.6e-09  Score=73.66  Aligned_cols=42  Identities=26%  Similarity=0.400  Sum_probs=39.1

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+...|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCS
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.85  E-value=1.3e-09  Score=72.35  Aligned_cols=40  Identities=23%  Similarity=0.404  Sum_probs=37.5

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKM  128 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~  128 (527)
                      |+++|++++||+|++||++|.+..+|..|+++|++++++.
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            7889999999999999999999999999999999988763

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.85  E-value=1.6e-09  Score=73.62  Aligned_cols=42  Identities=26%  Similarity=0.448  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+...|.+|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.5e-09  Score=73.80  Aligned_cols=43  Identities=26%  Similarity=0.450  Sum_probs=39.6

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|+|++|+++|.+..+|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887553

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.5e-09  Score=73.78  Aligned_cols=43  Identities=23%  Similarity=0.449  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|+|++|+++|....+|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887654

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.84  E-value=1.8e-09  Score=76.17  Aligned_cols=43  Identities=16%  Similarity=0.162  Sum_probs=40.2

Q ss_pred             ccchhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCC
Q 041528           85 RRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        85 ~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                      .|..|+++|+++++|.|++||++|.+..+|..|+++|++++++
T Consensus        11 ~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A           11 GTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             chhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            5667999999999999999999999999999999999998765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.4e-09  Score=73.86  Aligned_cols=43  Identities=23%  Similarity=0.413  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|+|++||++|.+..+|.+|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887553

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.6e-09  Score=73.56  Aligned_cols=43  Identities=19%  Similarity=0.312  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|++.|.+..+|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887553

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.84  E-value=1.6e-09  Score=73.62  Aligned_cols=42  Identities=26%  Similarity=0.377  Sum_probs=39.1

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+..+|.+|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.8e-09  Score=73.31  Aligned_cols=42  Identities=17%  Similarity=0.298  Sum_probs=39.0

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+..+|..|+++|++++++.+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP   43 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCS
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.4e-09  Score=73.86  Aligned_cols=42  Identities=21%  Similarity=0.402  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++|++.|.+...|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.6e-09  Score=73.56  Aligned_cols=42  Identities=29%  Similarity=0.403  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++|+++|.+..+|.+|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.6e-09  Score=73.64  Aligned_cols=43  Identities=23%  Similarity=0.379  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||.|++|++.|.+..+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887654

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.6e-09  Score=73.61  Aligned_cols=42  Identities=24%  Similarity=0.403  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+..+|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.6e-09  Score=73.53  Aligned_cols=43  Identities=23%  Similarity=0.402  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|+|++|+++|....+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887654

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.9e-09  Score=73.19  Aligned_cols=42  Identities=24%  Similarity=0.441  Sum_probs=39.1

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+...|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP   43 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.83  E-value=1.7e-09  Score=73.41  Aligned_cols=43  Identities=26%  Similarity=0.455  Sum_probs=39.6

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||.|++||++|.+..+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887543

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.6e-09  Score=73.65  Aligned_cols=43  Identities=21%  Similarity=0.411  Sum_probs=39.6

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++||++|.+..+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4889999999999999999999999999999999999887543

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.7e-09  Score=73.43  Aligned_cols=42  Identities=26%  Similarity=0.434  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++|+++|.+...|.+|+++|++++++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP   43 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSS
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.83  E-value=5.7e-10  Score=76.74  Aligned_cols=37  Identities=24%  Similarity=0.467  Sum_probs=30.4

Q ss_pred             ccCCCCCccCCCcCccccchhhhccccc-ccccCCCCC
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKR-SHFVGGSED  490 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r-~H~~~~~~~  490 (527)
                      +|+++|||.|++|+|+|....+|..||+ +|+++....
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~~   38 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGE   38 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCCC
Confidence            5899999999999999999999999999 999877653

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.7e-09  Score=73.41  Aligned_cols=42  Identities=21%  Similarity=0.376  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++|+++|.+..+|.+|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSS
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.7e-09  Score=73.48  Aligned_cols=42  Identities=24%  Similarity=0.377  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+..+|.+|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSS
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.83  E-value=1.6e-09  Score=73.58  Aligned_cols=42  Identities=19%  Similarity=0.263  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+...|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.8e-09  Score=73.36  Aligned_cols=43  Identities=23%  Similarity=0.442  Sum_probs=39.6

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|.|++||++|.+..+|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4889999999999999999999999999999999999887553

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.8e-09  Score=73.27  Aligned_cols=42  Identities=24%  Similarity=0.381  Sum_probs=39.1

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+..+|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.9e-09  Score=73.25  Aligned_cols=42  Identities=29%  Similarity=0.411  Sum_probs=39.0

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|+++++|+|++|+++|.+..+|.+|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP   43 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCC
Confidence            388999999999999999999999999999999999988754

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.83  E-value=2.4e-09  Score=80.50  Aligned_cols=33  Identities=24%  Similarity=0.456  Sum_probs=22.8

Q ss_pred             hhhhccCCCcccccc--ccccccChhhHHHHHhhh
Q 041528           89 DSNTLTSQQEMVCKE--CGKVFQSLKALCGHMACH  121 (527)
Q Consensus        89 H~~~h~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H  121 (527)
                      |+++|++++||+|.+  |++.|.....|.+|+++|
T Consensus        38 H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           38 HTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             HHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             HHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            333444445556654  888888888888888876

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.8e-09  Score=73.31  Aligned_cols=43  Identities=21%  Similarity=0.340  Sum_probs=39.3

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|+++|.+..+|..|+++|.+++++.+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3788999999999999999999999999999999999887553

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.9e-09  Score=73.26  Aligned_cols=43  Identities=23%  Similarity=0.481  Sum_probs=39.6

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|+++++|+|++|++.|.+..+|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887553

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.6e-09  Score=73.61  Aligned_cols=42  Identities=26%  Similarity=0.440  Sum_probs=39.1

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+..+|.+|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.8e-09  Score=73.28  Aligned_cols=42  Identities=24%  Similarity=0.407  Sum_probs=39.0

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|+++++|+|++|+++|.+..+|.+|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSST
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            388999999999999999999999999999999999988754

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.7e-09  Score=73.41  Aligned_cols=42  Identities=24%  Similarity=0.448  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.....|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.9e-09  Score=73.25  Aligned_cols=43  Identities=26%  Similarity=0.449  Sum_probs=39.4

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|+++|.+..+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4888999999999999999999999999999999999887543

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2e-09  Score=73.07  Aligned_cols=42  Identities=24%  Similarity=0.438  Sum_probs=39.0

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||.|++||++|.+...|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCS
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            488999999999999999999999999999999999888754

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.8e-09  Score=73.31  Aligned_cols=42  Identities=19%  Similarity=0.324  Sum_probs=38.8

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcC-CCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSE-KDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~-~~~~~~  129 (527)
                      .|+++|++++||+|++|+++|.+..+|..|+++|.+ ++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            488999999999999999999999999999999999 887754

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.81  E-value=2.2e-09  Score=72.87  Aligned_cols=42  Identities=29%  Similarity=0.432  Sum_probs=39.0

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||.|++||++|.+...|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP   43 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCST
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-09  Score=73.55  Aligned_cols=42  Identities=26%  Similarity=0.430  Sum_probs=39.1

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+..+|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCS
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.4e-09  Score=73.86  Aligned_cols=43  Identities=26%  Similarity=0.427  Sum_probs=39.5

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|++.|....+|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999998887553

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-09  Score=73.55  Aligned_cols=43  Identities=26%  Similarity=0.510  Sum_probs=39.6

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||+|++|++.|.+..+|..|+++|++++++.+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887653

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.2e-09  Score=72.94  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++|+++|.+...|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCS
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.5e-09  Score=72.60  Aligned_cols=42  Identities=21%  Similarity=0.379  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||.|++||++|.+...|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSS
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2e-09  Score=73.10  Aligned_cols=43  Identities=26%  Similarity=0.448  Sum_probs=39.7

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .|+++|++++||.|++|++.|.....|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4889999999999999999999999999999999999887653

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.2e-09  Score=72.95  Aligned_cols=42  Identities=21%  Similarity=0.353  Sum_probs=38.9

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++|+++|.+...|.+|+++|.+++++.+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP   43 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            378899999999999999999999999999999999988754

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.1e-09  Score=73.02  Aligned_cols=42  Identities=21%  Similarity=0.349  Sum_probs=39.2

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|+++++|+|++||++|.+..+|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.1e-09  Score=72.98  Aligned_cols=42  Identities=24%  Similarity=0.365  Sum_probs=39.1

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+...|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.1e-09  Score=72.97  Aligned_cols=42  Identities=24%  Similarity=0.366  Sum_probs=39.1

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++|+++|.+...|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP   43 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.4e-09  Score=72.68  Aligned_cols=42  Identities=21%  Similarity=0.423  Sum_probs=39.1

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|+++++|+|++||++|.+..+|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.5e-09  Score=72.91  Aligned_cols=42  Identities=26%  Similarity=0.472  Sum_probs=38.8

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||.|++|+++|.+..+|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999887643

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.80  E-value=1.3e-09  Score=69.13  Aligned_cols=34  Identities=21%  Similarity=0.374  Sum_probs=31.7

Q ss_pred             ccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +|++++||.|++|++.|.+...|.+|+++|+++.
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            4889999999999999999999999999998764

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.5e-09  Score=72.62  Aligned_cols=42  Identities=21%  Similarity=0.378  Sum_probs=38.9

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+...|..|+++|++++++.+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP   43 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSS
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCC
Confidence            378899999999999999999999999999999999988754

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.3e-09  Score=72.77  Aligned_cols=42  Identities=21%  Similarity=0.420  Sum_probs=39.1

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|+++++|+|++|+++|....+|..|+++|++++++.+
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSS
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.80  E-value=2.4e-09  Score=68.84  Aligned_cols=36  Identities=19%  Similarity=0.322  Sum_probs=34.1

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      |+++|++++||+|++|++.|.+...|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            788999999999999999999999999999999864

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.1e-09  Score=72.95  Aligned_cols=42  Identities=21%  Similarity=0.322  Sum_probs=39.0

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++|+++|.+..+|.+|+++|.+++++.+
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCC
Confidence            488999999999999999999999999999999999988754

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=2.8e-09  Score=71.62  Aligned_cols=41  Identities=24%  Similarity=0.483  Sum_probs=38.2

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      |+++|+++++|.|++|++.|.+..+|..|+++|++++++.+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            78899999999999999999999999999999999888743

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.79  E-value=2.9e-09  Score=72.27  Aligned_cols=42  Identities=17%  Similarity=0.256  Sum_probs=38.9

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|+++++|+|++|+++|.+..+|..|+++|.+++++.+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP   43 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            378899999999999999999999999999999999988754

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.6e-09  Score=72.54  Aligned_cols=42  Identities=21%  Similarity=0.440  Sum_probs=39.0

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.....|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGP   43 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCT
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            478999999999999999999999999999999999988754

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=8.9e-10  Score=71.08  Aligned_cols=35  Identities=14%  Similarity=0.079  Sum_probs=32.5

Q ss_pred             ccccCCCCCccCCCcCccccchhhhccc-ccccccC
Q 041528          452 RLGSKKSKGHECPFCFRVFKSGQALGGH-KRSHFVG  486 (527)
Q Consensus       452 ~~~Ht~ekp~~C~iC~k~F~~~~~L~~H-~r~H~~~  486 (527)
                      +++|++++||+|++|+++|.+...|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            4679999999999999999999999999 9999864

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.78  E-value=1.3e-09  Score=69.14  Aligned_cols=34  Identities=32%  Similarity=0.531  Sum_probs=31.7

Q ss_pred             ccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +|++++||.|++|+++|.+..+|..|+++|+++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            4889999999999999999999999999998763

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.9e-09  Score=72.34  Aligned_cols=42  Identities=19%  Similarity=0.281  Sum_probs=38.9

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|+++|+++++|+|++|+++|.+..+|..|+++|.+++++.+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP   43 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCS
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCC
Confidence            378899999999999999999999999999999999988754

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.9e-09  Score=68.51  Aligned_cols=37  Identities=16%  Similarity=0.409  Sum_probs=34.8

Q ss_pred             CcccccCCCceecccCCCccCCchhHHHHhhhhcCCCC
Q 041528            1 MEAANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGN   38 (527)
Q Consensus         1 m~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p   38 (527)
                      |. +|++++||.|.+|++.|.....|.+|+++|++++|
T Consensus         1 ~~-~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GS-SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CC-CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CC-CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            55 99999999999999999999999999999999875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=4.4e-09  Score=71.69  Aligned_cols=42  Identities=24%  Similarity=0.385  Sum_probs=38.9

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHh-hhcCCCCCCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMA-CHSEKDNKMK  129 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~-~H~~~~~~~~  129 (527)
                      .|+++|++++||+|++||++|.+...|..|++ +|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C   44 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP   44 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCC
Confidence            48899999999999999999999999999999 9999988754

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=5.7e-10  Score=84.74  Aligned_cols=69  Identities=13%  Similarity=0.036  Sum_probs=57.6

Q ss_pred             ccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccccccccccCCCCCccCCCcCc
Q 041528          389 PRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFR  468 (527)
Q Consensus       389 ~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k  468 (527)
                      +..|..|+++|.++++                          +.|.+|++.|  . ...|..|+ .|.+++||.|+.|++
T Consensus         2 ~~~L~~H~~~~c~~r~--------------------------~~C~~C~~~~--~-~~~L~~H~-~~c~~~~~~C~~C~~   51 (75)
T 2d9k_A            2 SSGSSGHEETECPLRL--------------------------AVCQHCDLEL--S-ILKLKEHE-DYCGARTELCGNCGR   51 (75)
T ss_dssp             CCCCSCCCCCCCCCCC--------------------------EECSSSCCEE--C-HHHHHHHH-HHHHHCEEECSSSCC
T ss_pred             chHHHhhCcccCCCcc--------------------------cCCcccChHh--h-HHHHHHHH-hHcCCCceEcccCCC
Confidence            4567778777777654                          4488999999  4 78888898 899999999999999


Q ss_pred             cccchhhhcccccccccCCC
Q 041528          469 VFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       469 ~F~~~~~L~~H~r~H~~~~~  488 (527)
                      .|. ...|..|+++|.++..
T Consensus        52 ~~~-~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A           52 NVL-VKDLKTHPEVCGREGS   70 (75)
T ss_dssp             EEE-TTGGGTHHHHBTTBSS
T ss_pred             cCc-HHHHHHHHHHccCCcC
Confidence            988 5999999999988643

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.4e-09  Score=68.47  Aligned_cols=34  Identities=21%  Similarity=0.186  Sum_probs=31.7

Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      +.|++++||.|++|++.|.+...|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            3588999999999999999999999999999875

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=1.7e-09  Score=69.68  Aligned_cols=34  Identities=21%  Similarity=0.356  Sum_probs=32.0

Q ss_pred             cccCCCCCccCCCcCccccch-hhhcccccccccC
Q 041528          453 LGSKKSKGHECPFCFRVFKSG-QALGGHKRSHFVG  486 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~-~~L~~H~r~H~~~  486 (527)
                      ++|++++||.|++|++.|.+. ..|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            579999999999999999999 9999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.7e-09  Score=68.11  Aligned_cols=34  Identities=35%  Similarity=0.551  Sum_probs=31.8

Q ss_pred             ccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +|++++||.|++|++.|.+...|..|+++|+++.
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5889999999999999999999999999999763

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.2e-09  Score=68.58  Aligned_cols=34  Identities=24%  Similarity=0.260  Sum_probs=31.8

Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      .+|++++||.|++|++.|.....|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3689999999999999999999999999999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.6e-09  Score=68.27  Aligned_cols=34  Identities=21%  Similarity=0.333  Sum_probs=31.8

Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      +.|++++||+|++|++.|.+...|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            4689999999999999999999999999999875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=5.2e-09  Score=70.62  Aligned_cols=41  Identities=24%  Similarity=0.454  Sum_probs=37.6

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      +.++|+++++|+|++|++.|.+..+|..|+++|.+++++.+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            46789999999999999999999999999999999988754

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=7.5e-09  Score=70.23  Aligned_cols=42  Identities=17%  Similarity=0.362  Sum_probs=38.3

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      ++++|+++++|+|++|++.|.+..+|..|+++|++++++.+.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            467899999999999999999999999999999999887653

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.70  E-value=7.4e-09  Score=67.46  Aligned_cols=35  Identities=20%  Similarity=0.689  Sum_probs=33.2

Q ss_pred             ccCCCceecccCCCccCCchhHHHHhhhhcCCCCc
Q 041528            5 NQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNS   39 (527)
Q Consensus         5 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~   39 (527)
                      |++++||.|.+|++.|...+.|.+|+++|++++||
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   35 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   35 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            67899999999999999999999999999999998

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=9.5e-09  Score=67.74  Aligned_cols=38  Identities=26%  Similarity=0.434  Sum_probs=35.2

Q ss_pred             hhccCCCccccccccccccChhhHHHHHhhhcCCCCCC
Q 041528           91 NTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKM  128 (527)
Q Consensus        91 ~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~  128 (527)
                      ++|++++||+|++|+++|....+|..|+++|++++++.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            56899999999999999999999999999999988763

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.68  E-value=4.5e-09  Score=76.54  Aligned_cols=43  Identities=9%  Similarity=0.064  Sum_probs=38.0

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGEGEVK   49 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C~~~~   49 (527)
                      ++|++++||.|+.|++.|.....|.   ++|++++|| .|+.|++.|
T Consensus         7 ~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~-~C~~C~k~f   49 (62)
T 1vd4_A            7 RDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTF-RCTFCHTEV   49 (62)
T ss_dssp             SSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEE-BCSSSCCBC
T ss_pred             HHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCE-ECCCCCCcc
Confidence            4899999999999999999988886   789999999 888886544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=4.7e-09  Score=82.22  Aligned_cols=42  Identities=17%  Similarity=0.394  Sum_probs=38.3

Q ss_pred             ccccCCCceecccCCCccCCchhHHHHhhhhcCCCCccccccc
Q 041528            3 AANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEGE   45 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~C   45 (527)
                      ++|++++||+|.+|++.|.....|.+|+++|++++|| +|..|
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~-~C~~~   59 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQK-RAKRQ   59 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHH-HCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCc-ccchh
Confidence            4799999999999999999999999999999999998 66554

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.66  E-value=1.5e-08  Score=67.59  Aligned_cols=39  Identities=15%  Similarity=0.251  Sum_probs=36.1

Q ss_pred             hhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           91 NTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        91 ~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      ++|+++++|+|++|++.|....+|..|+++|++++++.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            568999999999999999999999999999999988754

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1.2e-08  Score=69.12  Aligned_cols=41  Identities=20%  Similarity=0.289  Sum_probs=37.7

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      ++++|+++++|+|++|+++|.+..+|.+|+++|.+++++.+
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCC
Confidence            46789999999999999999999999999999999988754

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.65  E-value=1.2e-08  Score=64.43  Aligned_cols=35  Identities=23%  Similarity=0.456  Sum_probs=33.0

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhhcCCCC
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGN   38 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p   38 (527)
                      +|++++||.|.+|++.|...+.|.+|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            58899999999999999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.3e-08  Score=74.57  Aligned_cols=36  Identities=25%  Similarity=0.391  Sum_probs=32.9

Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccCCC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGS  488 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~~  488 (527)
                      .+|+++|||+|++|+|+|.+..+|.+||++|+++..
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            357889999999999999999999999999998754

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.65  E-value=1.5e-08  Score=64.13  Aligned_cols=35  Identities=20%  Similarity=0.517  Sum_probs=33.0

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhhcCCCC
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGN   38 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p   38 (527)
                      +|++++||.|.+|++.|.....|.+|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            58899999999999999999999999999998875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=1.6e-08  Score=73.22  Aligned_cols=39  Identities=13%  Similarity=0.173  Sum_probs=35.0

Q ss_pred             cccCCCceeccc--CCCccCCchhHHHHh-hhhcCCCCccccc
Q 041528            4 ANQKKKLFVCKY--CNKRYPCGKSLGGHI-RTHMNNGNSAEAE   43 (527)
Q Consensus         4 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~-~~H~~~~p~~~C~   43 (527)
                      .++++|||+|.+  |+|.|...+.|.+|+ ++|++++|| .|.
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~-~~~   62 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPA-FSA   62 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCC-CCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCc-ccc
Confidence            467899999976  999999999999998 689999999 663

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.4e-08  Score=68.80  Aligned_cols=40  Identities=23%  Similarity=0.409  Sum_probs=37.0

Q ss_pred             hhhccCCCccccccccccccChhhHHHHHhhhcCCCCCCC
Q 041528           90 SNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        90 ~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      +++|+++++|.|++|+++|.+..+|..|+++|.+++++.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP   43 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            5789999999999999999999999999999999888754

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.62  E-value=5.3e-09  Score=71.42  Aligned_cols=39  Identities=21%  Similarity=0.324  Sum_probs=33.9

Q ss_pred             cccccccccCCCCCccCC--CcCccccchhhhcccccccccC
Q 041528          447 TNVDKRLGSKKSKGHECP--FCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       447 ~l~~h~~~Ht~ekp~~C~--iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      ++.+ .+.|++++||.|+  +||++|.+..+|.+|+++|+++
T Consensus         6 ~~~~-~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            6 SIDK-YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGG-SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHH-HhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3444 4569999999996  7999999999999999999876

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=7.4e-09  Score=66.09  Aligned_cols=33  Identities=30%  Similarity=0.508  Sum_probs=31.0

Q ss_pred             ccCCCCCccCCCcCccccchhhhcccccccccC
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      .|++++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            478899999999999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2e-08  Score=64.82  Aligned_cols=33  Identities=18%  Similarity=0.253  Sum_probs=30.5

Q ss_pred             hccCCCcccccc--ccccccChhhHHHHHhhhcCC
Q 041528           92 TLTSQQEMVCKE--CGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        92 ~h~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      .+++++||+|++  |+++|.+.++|++|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            368999999987  999999999999999999975

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.60  E-value=2.1e-08  Score=65.26  Aligned_cols=36  Identities=28%  Similarity=0.559  Sum_probs=32.8

Q ss_pred             ccCCCccccccccccccChhhHHHHHhhhcCCCCCC
Q 041528           93 LTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKM  128 (527)
Q Consensus        93 h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~  128 (527)
                      |++++||+|++||+.|.+.++|..|+++|++++++.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            678999999999999999999999999999988763

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.59  E-value=8e-09  Score=66.47  Aligned_cols=33  Identities=30%  Similarity=0.434  Sum_probs=30.8

Q ss_pred             ccCCCCCccCCC--cCccccchhhhcccccccccC
Q 041528          454 GSKKSKGHECPF--CFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       454 ~Ht~ekp~~C~i--C~k~F~~~~~L~~H~r~H~~~  486 (527)
                      .|++++||.|++  |+++|.+...|..|+++|+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            488999999996  999999999999999999876

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=3e-08  Score=66.75  Aligned_cols=40  Identities=18%  Similarity=0.337  Sum_probs=36.5

Q ss_pred             hhccCCCccccccccccccChhhHHHHHhhhcCCCCCCCc
Q 041528           91 NTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDNKMKT  130 (527)
Q Consensus        91 ~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~~~~  130 (527)
                      .+|++++||+|++|+++|....+|..|+++|++++++.++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~   42 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGP   42 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCc
Confidence            4689999999999999999999999999999999887654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=3.2e-08  Score=63.45  Aligned_cols=35  Identities=20%  Similarity=0.415  Sum_probs=32.7

Q ss_pred             ccccCCCceecccCCCccCCc-hhHHHHhhhhcCCC
Q 041528            3 AANQKKKLFVCKYCNKRYPCG-KSLGGHIRTHMNNG   37 (527)
Q Consensus         3 ~~h~~~~~~~C~~C~k~f~~~-~~L~~H~~~H~~~~   37 (527)
                      ++|++++||+|.+|++.|... +.|.+|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            489999999999999999999 99999999998864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=3e-08  Score=63.16  Aligned_cols=34  Identities=26%  Similarity=0.365  Sum_probs=31.6

Q ss_pred             hhccCCCccccccccccccChhhHHHHHhhhcCC
Q 041528           91 NTLTSQQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        91 ~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      +.|++++||+|++|++.|....+|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            3588999999999999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=2.9e-08  Score=63.76  Aligned_cols=35  Identities=23%  Similarity=0.384  Sum_probs=32.5

Q ss_pred             CcccccCCCceecccCCCccCCchhHHHH-hhhhcCC
Q 041528            1 MEAANQKKKLFVCKYCNKRYPCGKSLGGH-IRTHMNN   36 (527)
Q Consensus         1 m~~~h~~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~~   36 (527)
                      |. +|++++||+|..|++.|...+.|.+| +++|+++
T Consensus         1 ~~-~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GS-SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CC-SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CC-ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            55 99999999999999999999999999 8899875

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=3.5e-08  Score=62.77  Aligned_cols=33  Identities=18%  Similarity=0.264  Sum_probs=31.3

Q ss_pred             hccCCCccccccccccccChhhHHHHHhhhcCC
Q 041528           92 TLTSQQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        92 ~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      +|++++||+|++|++.|....+|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            588999999999999999999999999999875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.53  E-value=2.2e-08  Score=61.99  Aligned_cols=29  Identities=28%  Similarity=0.537  Sum_probs=26.7

Q ss_pred             CCccCCCcCccccchhhhcccccccccCC
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +||.|++||++|.+..+|..|+++|+++.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=4.6e-08  Score=62.26  Aligned_cols=34  Identities=15%  Similarity=0.384  Sum_probs=32.1

Q ss_pred             cccCCCceecccCCCccCCchhHHHHhhhhcCCC
Q 041528            4 ANQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNG   37 (527)
Q Consensus         4 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~   37 (527)
                      .|++++||+|.+|++.|...+.|.+|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999999998764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6.3e-08  Score=61.55  Aligned_cols=34  Identities=29%  Similarity=0.501  Sum_probs=31.5

Q ss_pred             hccCCCccccccccccccChhhHHHHHhhhcCCC
Q 041528           92 TLTSQQEMVCKECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        92 ~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      .|+++++|.|++|++.|.+..+|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999763

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=5.7e-09  Score=81.76  Aligned_cols=55  Identities=5%  Similarity=-0.144  Sum_probs=45.1

Q ss_pred             CCcccccCCCCcccccCccccccccccCCCCCccCCCcCccccchhhhcccccccccCCCC
Q 041528          429 SKFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGGSE  489 (527)
Q Consensus       429 ~~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~~~  489 (527)
                      .+|.|++|+|.|  .....|..|+++|++++||+|..    |..+..|..|.++|.+.-++
T Consensus        24 kpy~C~~C~k~F--~~~~~L~~H~~~Ht~ekp~~C~~----~~~~~~~~~~~~~~~~~~~~   78 (88)
T 1x6f_A           24 STYQCKHCDSKL--QSTAELTSHLNIHNEEFQKRAKR----QERRKQLLSKQKYADGAFAD   78 (88)
T ss_dssp             SCEECSSSCCEE--SSHHHHHHHHHHHHHHHHHHCCC----CSCCCCCCCCCCCCCCSSSC
T ss_pred             CCCcCCCCCCEe--CCHHHHHHHHHHhCCCCCcccch----hhhHHHHHhhhccccccccc
Confidence            346688999999  78889999999999999999965    45688899999999886653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.49  E-value=4.3e-08  Score=67.13  Aligned_cols=36  Identities=22%  Similarity=0.441  Sum_probs=30.2

Q ss_pred             hccCCCccccccccccccChhhHHHHHh-hhcCCCCC
Q 041528           92 TLTSQQEMVCKECGKVFQSLKALCGHMA-CHSEKDNK  127 (527)
Q Consensus        92 ~h~~~k~~~C~~Cgk~F~~~~~L~~H~~-~H~~~~~~  127 (527)
                      +|++++||.|.+||++|....+|..|++ +|.++...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            5899999999999999999999999999 99987554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.48  E-value=5.9e-08  Score=60.52  Aligned_cols=31  Identities=32%  Similarity=0.520  Sum_probs=30.0

Q ss_pred             CceecccCCCccCCchhHHHHhhhhcCCCCc
Q 041528            9 KLFVCKYCNKRYPCGKSLGGHIRTHMNNGNS   39 (527)
Q Consensus         9 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~   39 (527)
                      +||.|.+|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5899999999999999999999999999998

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.47  E-value=2.9e-08  Score=59.14  Aligned_cols=28  Identities=21%  Similarity=0.366  Sum_probs=26.3

Q ss_pred             CCCccCCCcCccccchhhhccccccccc
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      ++||.|++|+++|.+...|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5899999999999999999999999975

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=6.1e-08  Score=62.50  Aligned_cols=35  Identities=23%  Similarity=0.373  Sum_probs=33.2

Q ss_pred             ccCCCceecc--cCCCccCCchhHHHHhhhhcCCCCc
Q 041528            5 NQKKKLFVCK--YCNKRYPCGKSLGGHIRTHMNNGNS   39 (527)
Q Consensus         5 h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~   39 (527)
                      |++++||.|.  .|++.|...+.|.+|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6789999999  5999999999999999999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=7.4e-08  Score=65.72  Aligned_cols=41  Identities=22%  Similarity=0.353  Sum_probs=37.7

Q ss_pred             hhhhccCCCccccc--cccccccChhhHHHHHhhhcCCCCCCC
Q 041528           89 DSNTLTSQQEMVCK--ECGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        89 H~~~h~~~k~~~C~--~Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      |.++|+++++|+|.  +|+++|.....|..|+++|.+++++.+
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C   45 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP   45 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSS
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            56789999999998  899999999999999999999988754

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.47  E-value=2.2e-08  Score=59.25  Aligned_cols=27  Identities=26%  Similarity=0.437  Sum_probs=25.5

Q ss_pred             CCCccCCCcCccccchhhhcccccccc
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~  484 (527)
                      ++||.|++||++|.+...|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            589999999999999999999999995

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=9.7e-08  Score=69.19  Aligned_cols=38  Identities=18%  Similarity=0.262  Sum_probs=34.0

Q ss_pred             hccCCCcccccc--ccccccChhhHHHHH-hhhcCCCCCCC
Q 041528           92 TLTSQQEMVCKE--CGKVFQSLKALCGHM-ACHSEKDNKMK  129 (527)
Q Consensus        92 ~h~~~k~~~C~~--Cgk~F~~~~~L~~H~-~~H~~~~~~~~  129 (527)
                      .++|+|||+|.+  |+++|.+.++|.+|+ ++|++++|+.+
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            368999999976  999999999999998 79999999844

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=9.6e-08  Score=60.73  Aligned_cols=33  Identities=27%  Similarity=0.534  Sum_probs=30.8

Q ss_pred             hccCCCccccccccccccChhhHHHHHhhhcCC
Q 041528           92 TLTSQQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        92 ~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      .|++++||+|++|++.|.....|..|+++|+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            478899999999999999999999999999875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.44  E-value=1.1e-07  Score=59.34  Aligned_cols=31  Identities=26%  Similarity=0.477  Sum_probs=29.2

Q ss_pred             CccccccccccccChhhHHHHHhhhcCCCCC
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                      +||+|++||+.|....+|..|+++|++++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5899999999999999999999999998875

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=3.5e-08  Score=58.31  Aligned_cols=27  Identities=26%  Similarity=0.400  Sum_probs=25.5

Q ss_pred             CCCccCCCcCccccchhhhcccccccc
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~  484 (527)
                      ++||.|++||++|.+...|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            589999999999999999999999985

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=8.5e-09  Score=78.18  Aligned_cols=69  Identities=14%  Similarity=0.203  Sum_probs=54.5

Q ss_pred             chhHHHHhhhhcCCCCccccccccccccccccccccCCcccccccccCCCccccCCCCCcccccchhhhhccCCCccccc
Q 041528           23 GKSLGGHIRTHMNNGNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRTRRFVDSNTLTSQQEMVCK  102 (527)
Q Consensus        23 ~~~L~~H~~~H~~~~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~~~~~H~~~h~~~k~~~C~  102 (527)
                      +..|..|+++|.+++|+ .                        |..|++.|..        ..|..|+ .|.+++||.|+
T Consensus         2 ~~~L~~H~~~~c~~r~~-~------------------------C~~C~~~~~~--------~~L~~H~-~~c~~~~~~C~   47 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLA-V------------------------CQHCDLELSI--------LKLKEHE-DYCGARTELCG   47 (75)
T ss_dssp             CCCCSCCCCCCCCCCCE-E------------------------CSSSCCEECH--------HHHHHHH-HHHHHCEEECS
T ss_pred             chHHHhhCcccCCCccc-C------------------------CcccChHhhH--------HHHHHHH-hHcCCCceEcc
Confidence            35677888888888888 4                        4455555532        2677798 89999999999


Q ss_pred             cccccccChhhHHHHHhhhcCCCC
Q 041528          103 ECGKVFQSLKALCGHMACHSEKDN  126 (527)
Q Consensus       103 ~Cgk~F~~~~~L~~H~~~H~~~~~  126 (527)
                      .|++.|. ...|..|+++|+++..
T Consensus        48 ~C~~~~~-~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A           48 NCGRNVL-VKDLKTHPEVCGREGS   70 (75)
T ss_dssp             SSCCEEE-TTGGGTHHHHBTTBSS
T ss_pred             cCCCcCc-HHHHHHHHHHccCCcC
Confidence            9999988 5999999999997643

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.42  E-value=7.3e-08  Score=65.62  Aligned_cols=40  Identities=18%  Similarity=0.300  Sum_probs=35.1

Q ss_pred             cchhhhhccCCCccccc--cccccccChhhHHHHHhhhcCCC
Q 041528           86 RFVDSNTLTSQQEMVCK--ECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        86 ~~~H~~~h~~~k~~~C~--~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      ++.|...|++++||+|+  .||++|....+|+.|+++|++++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            44566779999999996  79999999999999999999763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.42  E-value=7.5e-08  Score=59.39  Aligned_cols=29  Identities=28%  Similarity=0.397  Sum_probs=27.3

Q ss_pred             CCCccCC--CcCccccchhhhcccccccccC
Q 041528          458 SKGHECP--FCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       458 ekp~~C~--iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      ++||.|+  .|+++|.+...|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            5899999  8999999999999999999976

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.41  E-value=5.3e-08  Score=58.86  Aligned_cols=29  Identities=24%  Similarity=0.386  Sum_probs=27.3

Q ss_pred             CCCccCCCcCccccchhhhcccccccccC
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      ++||.|++|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            58999999999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.41  E-value=5.5e-08  Score=58.39  Aligned_cols=28  Identities=25%  Similarity=0.276  Sum_probs=26.5

Q ss_pred             CCccCCCcCccccchhhhcccccccccC
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      +||.|++||+.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            6899999999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=1.4e-07  Score=60.75  Aligned_cols=35  Identities=20%  Similarity=0.414  Sum_probs=32.2

Q ss_pred             ccCCCccccc--cccccccChhhHHHHHhhhcCCCCC
Q 041528           93 LTSQQEMVCK--ECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        93 h~~~k~~~C~--~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                      |++++||+|.  .|+++|....+|.+|+++|++++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            6789999999  5999999999999999999988765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.77  E-value=3.4e-08  Score=59.82  Aligned_cols=29  Identities=34%  Similarity=0.378  Sum_probs=27.1

Q ss_pred             CCCccCCCcCccccchhhhcccccccccC
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      ++||.|++||+.|.+..+|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            47999999999999999999999999875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.39  E-value=8.2e-08  Score=56.55  Aligned_cols=27  Identities=33%  Similarity=0.528  Sum_probs=24.2

Q ss_pred             CccCCCcCccccchhhhcccccccccC
Q 041528          460 GHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      ||.|++|++.|.+...|.+|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            699999999999999999999999864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.39  E-value=6.2e-08  Score=59.94  Aligned_cols=30  Identities=23%  Similarity=0.385  Sum_probs=27.9

Q ss_pred             CccccccccccccCccccccccccCCCCCC
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHTASHSKING  404 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~  404 (527)
                      ++|.|.+||+.|...+.|..|+++|+++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            479999999999999999999999999764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=3.9e-08  Score=59.15  Aligned_cols=28  Identities=29%  Similarity=0.482  Sum_probs=26.3

Q ss_pred             CCccCCCcCccccchhhhcccccccccC
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      +||.|++|+++|.+..+|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            5899999999999999999999999875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.74  E-value=4.1e-08  Score=57.41  Aligned_cols=26  Identities=31%  Similarity=0.424  Sum_probs=24.6

Q ss_pred             CCccCCCcCccccchhhhcccccccc
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~  484 (527)
                      |||.|++||++|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            68999999999999999999999985

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=6.3e-08  Score=57.97  Aligned_cols=29  Identities=34%  Similarity=0.713  Sum_probs=26.9

Q ss_pred             CCccCCCcCccccchhhhcccccccccCC
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +||.|++|+++|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            68999999999999999999999998763

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.38  E-value=7.6e-08  Score=57.71  Aligned_cols=28  Identities=32%  Similarity=0.549  Sum_probs=26.3

Q ss_pred             CCccCCCcCccccchhhhcccccccccC
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      +||.|++|+++|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.37  E-value=6.6e-08  Score=61.40  Aligned_cols=29  Identities=24%  Similarity=0.235  Sum_probs=26.4

Q ss_pred             cCCCCCccCCCcCccccchhhhccccccc
Q 041528          455 SKKSKGHECPFCFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       455 Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H  483 (527)
                      ++|||||.|++|||+|.++++|.+||..+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py~   31 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAYY   31 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHHT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCeE
Confidence            67899999999999999999999999443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.37  E-value=1.6e-07  Score=60.13  Aligned_cols=34  Identities=24%  Similarity=0.555  Sum_probs=30.9

Q ss_pred             hccCCCcccccc--ccccccChhhHHHHHhhhcCCC
Q 041528           92 TLTSQQEMVCKE--CGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        92 ~h~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      .|++++||.|.+  ||++|...++|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            378999999995  9999999999999999999763

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.35  E-value=1.2e-07  Score=57.94  Aligned_cols=28  Identities=29%  Similarity=0.572  Sum_probs=26.4

Q ss_pred             CCccCC--CcCccccchhhhcccccccccC
Q 041528          459 KGHECP--FCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       459 kp~~C~--iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      +||.|+  +||++|.+...|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            689998  9999999999999999999876

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=1e-07  Score=57.09  Aligned_cols=28  Identities=25%  Similarity=0.315  Sum_probs=26.4

Q ss_pred             CCccCCCcCccccchhhhcccccccccC
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      +||.|++|++.|.+...|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.61  E-value=9.4e-08  Score=57.39  Aligned_cols=29  Identities=28%  Similarity=0.581  Sum_probs=26.7

Q ss_pred             CccccccccccccCccccccccccCCCCC
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHTASHSKIN  403 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  403 (527)
                      ++|.|.+||+.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47999999999999999999999999863

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=2.9e-07  Score=54.25  Aligned_cols=27  Identities=30%  Similarity=0.427  Sum_probs=25.2

Q ss_pred             CCccccccccccccChhhHHHHHhhhc
Q 041528           96 QQEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      ++||+|++||++|...++|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999884

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.26  E-value=4.9e-07  Score=53.97  Aligned_cols=28  Identities=25%  Similarity=0.610  Sum_probs=26.3

Q ss_pred             CccccccccccccChhhHHHHHhhhcCC
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      +||.|++||++|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=4.8e-07  Score=66.11  Aligned_cols=36  Identities=31%  Similarity=0.433  Sum_probs=32.6

Q ss_pred             hhccCCCccccccccccccChhhHHHHHhhhcCCCC
Q 041528           91 NTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKDN  126 (527)
Q Consensus        91 ~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~  126 (527)
                      ..|.+++||+|.+|+++|.+..+|.+|+++|++...
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            347889999999999999999999999999998654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.25  E-value=2.5e-07  Score=58.72  Aligned_cols=32  Identities=19%  Similarity=0.286  Sum_probs=28.7

Q ss_pred             ccCCCceecccCCCccCCchhHHHHhhhhcCCCCcccccc
Q 041528            5 NQKKKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNSAEAEG   44 (527)
Q Consensus         5 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~~C~~   44 (527)
                      +.+++||+|..|+|.|.+.+.|.+|+       || .|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py-~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AY-YCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HH-TSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------Ce-ECcC
Confidence            57899999999999999999999998       77 6654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.25  E-value=3.9e-07  Score=54.03  Aligned_cols=28  Identities=25%  Similarity=0.498  Sum_probs=26.0

Q ss_pred             CCccccccccccccChhhHHHHHhhhcC
Q 041528           96 QQEMVCKECGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      ++||+|++||++|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5799999999999999999999999974

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.24  E-value=4.7e-07  Score=54.45  Aligned_cols=29  Identities=21%  Similarity=0.520  Sum_probs=27.1

Q ss_pred             CCccccccccccccChhhHHHHHhhhcCC
Q 041528           96 QQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      ++||.|++||++|.....|..|+++|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            47999999999999999999999999875

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=4.2e-07  Score=53.44  Aligned_cols=27  Identities=19%  Similarity=0.501  Sum_probs=25.3

Q ss_pred             CCccccccccccccChhhHHHHHhhhc
Q 041528           96 QQEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      ++||+|++||++|.+...|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999985

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.24  E-value=3.1e-07  Score=55.43  Aligned_cols=28  Identities=29%  Similarity=0.470  Sum_probs=26.1

Q ss_pred             CCccCCCcCccccchhhhccc-ccccccC
Q 041528          459 KGHECPFCFRVFKSGQALGGH-KRSHFVG  486 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H-~r~H~~~  486 (527)
                      +||.|++|++.|.+...|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            589999999999999999999 8999875

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.53  E-value=1.6e-07  Score=56.76  Aligned_cols=29  Identities=24%  Similarity=0.615  Sum_probs=27.0

Q ss_pred             CccccccccccccCccccccccccCCCCC
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHTASHSKIN  403 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  403 (527)
                      ++|.|.+||+.|...+.|..|+++|++++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            68999999999999999999999999753

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.21  E-value=7.7e-07  Score=53.14  Aligned_cols=29  Identities=34%  Similarity=0.498  Sum_probs=27.0

Q ss_pred             CceecccCCCccCCchhHHHHhhhhcCCC
Q 041528            9 KLFVCKYCNKRYPCGKSLGGHIRTHMNNG   37 (527)
Q Consensus         9 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~   37 (527)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999998864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=6.5e-07  Score=53.36  Aligned_cols=28  Identities=36%  Similarity=0.692  Sum_probs=26.4

Q ss_pred             CccccccccccccChhhHHHHHhhhcCC
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      +||.|++||++|....+|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            5899999999999999999999999875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.49  E-value=2.1e-07  Score=54.28  Aligned_cols=26  Identities=27%  Similarity=0.544  Sum_probs=24.4

Q ss_pred             CccccccccccccCccccccccccCC
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHTASHS  400 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~~~H~  400 (527)
                      ++|.|.+||+.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            57999999999999999999999985

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.17  E-value=9.1e-07  Score=53.13  Aligned_cols=29  Identities=17%  Similarity=0.287  Sum_probs=26.9

Q ss_pred             CccccccccccccChhhHHHHHhhhcCCC
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      +||+|++||+.|...+.|..|+++|.++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999998764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.17  E-value=1e-06  Score=54.03  Aligned_cols=29  Identities=31%  Similarity=0.559  Sum_probs=27.1

Q ss_pred             CCccccc--cccccccChhhHHHHHhhhcCC
Q 041528           96 QQEMVCK--ECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        96 ~k~~~C~--~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      ++||.|+  .||++|.....|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            4799999  8999999999999999999976

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.16  E-value=8.3e-07  Score=52.83  Aligned_cols=28  Identities=29%  Similarity=0.578  Sum_probs=26.4

Q ss_pred             CccccccccccccChhhHHHHHhhhcCC
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      +||.|++||++|....+|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5899999999999999999999999875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.15  E-value=9.2e-07  Score=51.81  Aligned_cols=27  Identities=26%  Similarity=0.476  Sum_probs=24.1

Q ss_pred             ccccccccccccChhhHHHHHhhhcCC
Q 041528           98 EMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        98 ~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      ||+|++||++|.+...|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999863

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.15  E-value=1.1e-06  Score=53.53  Aligned_cols=28  Identities=29%  Similarity=0.591  Sum_probs=26.3

Q ss_pred             Cccccc--cccccccChhhHHHHHhhhcCC
Q 041528           97 QEMVCK--ECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        97 k~~~C~--~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      +||+|+  +||++|....+|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            589998  9999999999999999999976

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.15  E-value=1.3e-06  Score=52.49  Aligned_cols=30  Identities=30%  Similarity=0.608  Sum_probs=27.7

Q ss_pred             CceecccCCCccCCchhHHHHhhhhcCCCC
Q 041528            9 KLFVCKYCNKRYPCGKSLGGHIRTHMNNGN   38 (527)
Q Consensus         9 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p   38 (527)
                      +||.|.+|++.|...+.|.+|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            589999999999999999999999998764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.11  E-value=7.6e-07  Score=53.64  Aligned_cols=29  Identities=28%  Similarity=0.438  Sum_probs=26.6

Q ss_pred             CccccccccccccCccccccc-cccCCCCC
Q 041528          375 SQFKCLTCNKVFHSPRSLWGH-TASHSKIN  403 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H-~~~H~~~~  403 (527)
                      ++|.|.+||+.|...+.|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            479999999999999999999 89999864

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.07  E-value=6.3e-07  Score=53.50  Aligned_cols=27  Identities=30%  Similarity=0.383  Sum_probs=25.3

Q ss_pred             CCccCC--CcCccccchhhhccccccccc
Q 041528          459 KGHECP--FCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       459 kp~~C~--iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      +||.|+  +|++.|.+...|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999974

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.86  E-value=6.2e-06  Score=48.92  Aligned_cols=27  Identities=30%  Similarity=0.647  Sum_probs=25.1

Q ss_pred             Cccccc--cccccccChhhHHHHHhhhcC
Q 041528           97 QEMVCK--ECGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        97 k~~~C~--~Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      ++|.|+  .||++|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.04  E-value=3.9e-05  Score=62.72  Aligned_cols=33  Identities=27%  Similarity=0.293  Sum_probs=29.8

Q ss_pred             cccccCCCCCccCCCcCccccchhhhccccccc
Q 041528          451 KRLGSKKSKGHECPFCFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       451 h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H  483 (527)
                      +-.-|+|++||.|.+|+|.|.+..+|..|+|+.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            445699999999999999999999999999874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.59  E-value=0.00048  Score=57.34  Aligned_cols=80  Identities=20%  Similarity=0.275  Sum_probs=54.5

Q ss_pred             CCccccccccccccCcccccccc--ccCCCCC---CCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCccc
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHT--ASHSKIN---GCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTN  448 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~--~~H~~~~---~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l  448 (527)
                      .+++.|.+|+..|.+.+.+..|.  +.|....   .+. ++...          +           .=++.|.  ..   
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~-~~~~~----------~-----------~~~~~~~--~~---   82 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAI-NQGED----------S-----------VPAKKFK--AA---   82 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHH-TTCCC----------C-----------CSCCCCS--CC---
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcc-cCccc----------C-----------CCCCccC--CC---
Confidence            36799999999999999999998  6676421   110 00000          0           0022221  11   


Q ss_pred             cccccccCCCCCccCCCcCccccchhhhccccc
Q 041528          449 VDKRLGSKKSKGHECPFCFRVFKSGQALGGHKR  481 (527)
Q Consensus       449 ~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r  481 (527)
                       -+...+.+.+.|-|.+|++.|.+...|..|..
T Consensus        83 -~~~~~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           83 -PAEISDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             -SSCCSSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             -ccccccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence             13345778899999999999999999999965

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.44  E-value=0.00073  Score=55.18  Aligned_cols=33  Identities=18%  Similarity=0.311  Sum_probs=29.2

Q ss_pred             hhhccCCCccccccccccccChhhHHHHHhhhc
Q 041528           90 SNTLTSQQEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        90 ~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      -.-|+|+++|.|.+|++.|.+.++|..|+++..
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~   74 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSKD   74 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCHH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhhh
Confidence            355899999999999999999999999997644

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.26  E-value=0.0016  Score=54.16  Aligned_cols=85  Identities=19%  Similarity=0.202  Sum_probs=55.4

Q ss_pred             CCceecccCCCccCCchhHHHHh--hhhcCC-CCccccccccccccccccccccCCcccccccccCCCccccCCCCCccc
Q 041528            8 KKLFVCKYCNKRYPCGKSLGGHI--RTHMNN-GNSAEAEGEGEVKLNIDKIFSGRNIKKDSCFEAGGQSGYVLRANPKRT   84 (527)
Q Consensus         8 ~~~~~C~~C~k~f~~~~~L~~H~--~~H~~~-~p~~~C~~C~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~c~~c~~~~   84 (527)
                      .+++.|.+|+..|.+.+.+..|.  +.|... +.+ .+.                         ++...+..    ++.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~-~~~-------------------------~~~~~~~~----~~~~   79 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRY-MAI-------------------------NQGEDSVP----AKKF   79 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHH-HHH-------------------------TTCCCCCS----CCCC
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHH-hcc-------------------------cCcccCCC----CCcc
Confidence            36789999999999999999999  567543 222 110                         11000000    0111


Q ss_pred             ccchhhhhccCCCccccccccccccChhhHHHHH--hhhc
Q 041528           85 RRFVDSNTLTSQQEMVCKECGKVFQSLKALCGHM--ACHS  122 (527)
Q Consensus        85 ~~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~--~~H~  122 (527)
                      ....+...+.+.+.|-|.+|.+.|.+...|..|+  +.|.
T Consensus        80 ~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~~H~~gk~H~  119 (127)
T 1zu1_A           80 KAAPAEISDGEDRSKCCPVCNMTFSSPVVAESHYIGKTHI  119 (127)
T ss_dssp             SCCSSCCSSCCCTTTEETTTTEECSSHHHHHHHHTSHHHH
T ss_pred             CCCccccccCCCCCeEcCCCCCEeCCHHHHHHHHCCHHHH
Confidence            1111333466778899999999999999999998  4554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.55  E-value=0.0034  Score=40.87  Aligned_cols=25  Identities=32%  Similarity=0.514  Sum_probs=22.9

Q ss_pred             CCccCCCcCccccchhhhccccccc
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H  483 (527)
                      -+|.|+-|++.|.....|++||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            6799999999999999999999853

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.18  E-value=0.0029  Score=45.59  Aligned_cols=47  Identities=9%  Similarity=0.007  Sum_probs=40.8

Q ss_pred             cCCCCcccccCccccccc-cccCCCC------CccCC--CcCccccchhhhccccccc
Q 041528          435 VNGKTPIAQNLSTNVDKR-LGSKKSK------GHECP--FCFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       435 ~C~K~f~~~~~~~l~~h~-~~Ht~ek------p~~C~--iC~k~F~~~~~L~~H~r~H  483 (527)
                      .|++.|  .+...|..|. ..|.+.+      +|.|.  -|++.+.....|..|+|..
T Consensus         8 ~C~~~f--~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESA--SSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCC--SSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcC--CCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            689999  7888888886 5798776      89996  9999999999999999864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.17  E-value=0.044  Score=35.69  Aligned_cols=24  Identities=33%  Similarity=0.707  Sum_probs=22.2

Q ss_pred             CccccccccccccChhhHHHHHhh
Q 041528           97 QEMVCKECGKVFQSLKALCGHMAC  120 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~  120 (527)
                      -+|.|+-|+..|.....|+.||+-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            578999999999999999999984

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=90.89  E-value=0.14  Score=36.49  Aligned_cols=48  Identities=13%  Similarity=0.209  Sum_probs=36.4

Q ss_pred             cccCCCccccCCCCCcccccchhh-hhccCCC------ccccc--cccccccChhhHHHHHhhh
Q 041528           67 FEAGGQSGYVLRANPKRTRRFVDS-NTLTSQQ------EMVCK--ECGKVFQSLKALCGHMACH  121 (527)
Q Consensus        67 ~~c~~~~~~~c~~c~~~~~~~~H~-~~h~~~k------~~~C~--~Cgk~F~~~~~L~~H~~~H  121 (527)
                      ..|++.|...       ..|..|+ +.|.+.+      +|.|.  -|++.+.....|..|+++.
T Consensus         7 ~~C~~~f~~~-------~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSL-------FDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSH-------HHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCH-------HHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            3466655542       2566687 4688766      79997  8999999999999999875

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.67  E-value=0.22  Score=30.34  Aligned_cols=26  Identities=31%  Similarity=0.590  Sum_probs=22.9

Q ss_pred             ccccccccccccChhhHHHHH-hhhcC
Q 041528           98 EMVCKECGKVFQSLKALCGHM-ACHSE  123 (527)
Q Consensus        98 ~~~C~~Cgk~F~~~~~L~~H~-~~H~~  123 (527)
                      .|.|++|-+.|.+...|..|. ..|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            489999999999999999999 55653

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=88.93  E-value=0.1  Score=31.81  Aligned_cols=27  Identities=33%  Similarity=0.603  Sum_probs=22.6

Q ss_pred             CccCCCcCccccchhhhccccc-ccccC
Q 041528          460 GHECPFCFRVFKSGQALGGHKR-SHFVG  486 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~r-~H~~~  486 (527)
                      .|.|++|.+.|.+...|..|-. .|..+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4899999999999999999965 46543

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=83.79  E-value=2.1  Score=31.26  Aligned_cols=49  Identities=12%  Similarity=0.069  Sum_probs=34.6

Q ss_pred             CCccc-ccCCCCcccccCccccccccccCCCCCccCCCcCccccchhhhccccc
Q 041528          429 SKFCK-SVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRVFKSGQALGGHKR  481 (527)
Q Consensus       429 ~~~~c-~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r  481 (527)
                      ....| ..|+..+   .+..|..|....=..++-.|..|+..|.. ..|..|..
T Consensus        15 ~~v~C~~~C~~~v---~r~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H~~   64 (76)
T 2yuc_A           15 NVIPCPNRCPMKL---SRRDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESHEG   64 (76)
T ss_dssp             SCCBCTTCCSCBC---CSSSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHTTT
T ss_pred             cccCCCccccHHh---hHhHHHhhCHhhCCCcceECCCCCCccCH-HHHHHHHh
Confidence            34456 4787776   56777777765556778889999999875 45777764

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=83.24  E-value=0.47  Score=35.66  Aligned_cols=29  Identities=28%  Similarity=0.485  Sum_probs=24.1

Q ss_pred             CCceecccCCCccCCchhHHHHhhhhcCCCCc
Q 041528            8 KKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNS   39 (527)
Q Consensus         8 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~   39 (527)
                      +.--+|-.|||.|+   .|++|++.|+|..|.
T Consensus        19 ~d~iiClecGK~fK---~LkRHL~~~hgltpe   47 (87)
T 2jsp_A           19 DDHIVCLECGGSFK---SLKRHLTTHHSMTPE   47 (87)
T ss_dssp             SSCEECTBTCCEES---BHHHHHHHTTCSCHH
T ss_pred             CCceEecccchhhH---HHHHHHHHccCCCHH
Confidence            34468999999999   499999998888775

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.86  E-value=0.25  Score=37.18  Aligned_cols=26  Identities=27%  Similarity=0.321  Sum_probs=21.2

Q ss_pred             CCCccCCCcCccccchhhhcccccccccC
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      +.-..|-+|||.|.   .|++|+++|+|-
T Consensus        19 ~d~iiClecGK~fK---~LkRHL~~~hgl   44 (87)
T 2jsp_A           19 DDHIVCLECGGSFK---SLKRHLTTHHSM   44 (87)
T ss_dssp             SSCEECTBTCCEES---BHHHHHHHTTCS
T ss_pred             CCceEecccchhhH---HHHHHHHHccCC
Confidence            55678999999998   488999997653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	527
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-09
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	3e-06
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	1e-05
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-04

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.3 bits (123), Expect = 2e-09
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 458 SKGHECPFCFRVFKSGQALGGHKRSH 483
            + + C FC R F+S QALGGH   H
Sbjct: 3   PRSYTCSFCKREFRSAQALGGHMNVH 28

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.6 bits (98), Expect = 3e-06
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query: 9  KLFVCKYCNKRYPCGKSLGGHIRTH 33
          + + C +C + +   ++LGGH+  H
Sbjct: 4  RSYTCSFCKREFRSAQALGGHMNVH 28

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.1 bits (94), Expect = 1e-05
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 100 VCKECGKVFQSLKALCGHMACHSEKDNKMK 129
            C  C + F+S +AL GHM  H     +++
Sbjct: 7   TCSFCKREFRSAQALGGHMNVHRRDRARLR 36

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 376 QFKCLTCNKVFHSPRSLWGHTASHSK 401
            + C  C + F S ++L GH   H +
Sbjct: 5   SYTCSFCKREFRSAQALGGHMNVHRR 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	527
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.63
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.48
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.44
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.43
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.39
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.39
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.38
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.31
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.29
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.26
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.24
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.23
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.23
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.19
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.19
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.18
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.17
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.13
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.13
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.09
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.07
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.04
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.03
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.0
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.99
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.91
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.91
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.89
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.88
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.84
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.8
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.78
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.78
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.77
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.77
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.7
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.7
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.63
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.58
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.55
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.46
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.41
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.37
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.32
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.15
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.14
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.07
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.04
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.04
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.02
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.97
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.89
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.82
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.74
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.71
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.69
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.69
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.66
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.52
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.46
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.46
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.43
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.42
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.37
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.33
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.31
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.27
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.25
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.2
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.18
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.04
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.92
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.91
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.82
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.77
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.74
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.65
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.6
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.41
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.24
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.18
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.18
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.66
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.4
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.36
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.28
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.97
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.95
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.81
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.5
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.32
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.21
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.83
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.78
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.55
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.29
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.18
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.12
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.07
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.7
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.5
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.8
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.81
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	89.96
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.07
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.96
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.81
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.6
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.56
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	87.26
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.0
d1y0jb1	36	U-shaped transcription factor, different fingers {	86.71
d1y0jb1	36	U-shaped transcription factor, different fingers {	85.3
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	85.15
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	84.56
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	81.62
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	80.57

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=8.8e-18  Score=116.90  Aligned_cols=53  Identities=26%  Similarity=0.456  Sum_probs=47.4

Q ss_pred             CCccccccccccccCccccccccccCCCCCCCCcccccccCCCcCcCCCCCCCCCCCcccccCCCCcccccCcccccccc
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHTASHSKINGCCESINESSENSRETDSFPVPMPNSKFCKSVNGKTPIAQNLSTNVDKRL  453 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~C~~c~~~f~~~~~~~~~~~~~~~~~~~~c~~C~K~f~~~~~~~l~~h~~  453 (527)
                      +++|.|+ |||.|...++|..|+++|++                                                    
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~----------------------------------------------------   27 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLG----------------------------------------------------   27 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSC----------------------------------------------------
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhcccc----------------------------------------------------
Confidence            4788885 88888888888888877776                                                    


Q ss_pred             ccCCCCCccCCCcCccccchhhhccccccc
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSH  483 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H  483 (527)
                          ++||.|++||++|.+..+|..||++|
T Consensus        28 ----ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1          28 ----LRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             ----CCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             ----ccCCcCCCcCCEecCHHHHHHHHhcC
Confidence                89999999999999999999999998

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=5e-15  Score=93.77  Aligned_cols=37  Identities=19%  Similarity=0.389  Sum_probs=35.9

Q ss_pred             ccccccCCCCCccCCCcCccccchhhhcccccccccC
Q 041528          450 DKRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       450 ~h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      .|+++|+++|||+|++|||+|...++|.+|+|+|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=2.9e-14  Score=98.77  Aligned_cols=36  Identities=31%  Similarity=0.454  Sum_probs=27.1

Q ss_pred             cchhhhhccCCCccccccccccccChhhHHHHHhhh
Q 041528           86 RFVDSNTLTSQQEMVCKECGKVFQSLKALCGHMACH  121 (527)
Q Consensus        86 ~~~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H  121 (527)
                      |..|+++|+|++||.|++||++|.+.++|.+|+++|
T Consensus        18 l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1          18 RDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             HHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             hHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            333445555666678888889999999999999887

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1e-14  Score=88.22  Aligned_cols=33  Identities=24%  Similarity=0.257  Sum_probs=32.0

Q ss_pred             ccCCCCCccCCCcCccccchhhhcccccccccC
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      +|||+|||+|++|||+|..+++|..|+|+|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.39  E-value=3.8e-14  Score=88.98  Aligned_cols=35  Identities=31%  Similarity=0.575  Sum_probs=33.5

Q ss_pred             cccccCCCCCccCCCcCccccchhhhccccccccc
Q 041528          451 KRLGSKKSKGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       451 h~~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      |.|+|||||||+|++|+|+|.++++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            78999999999999999999999999999999974

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.39  E-value=3.8e-14  Score=86.92  Aligned_cols=34  Identities=21%  Similarity=0.374  Sum_probs=32.0

Q ss_pred             ccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          454 GSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       454 ~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +|||||||+|++|+|+|+++.+|++|||+|+.+.
T Consensus         1 g~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            4899999999999999999999999999998764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=4e-14  Score=88.19  Aligned_cols=35  Identities=20%  Similarity=0.252  Sum_probs=32.9

Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccccCC
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      |+|||||||+|++|||+|..+++|++||++|.++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            68999999999999999999999999999998763

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=3.5e-13  Score=85.11  Aligned_cols=37  Identities=24%  Similarity=0.449  Sum_probs=35.5

Q ss_pred             hhhhhccCCCccccccccccccChhhHHHHHhhhcCC
Q 041528           88 VDSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        88 ~H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      .|+++|+++|||+|++||++|.+.++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4899999999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6.1e-13  Score=80.31  Aligned_cols=33  Identities=27%  Similarity=0.535  Sum_probs=31.8

Q ss_pred             hccCCCccccccccccccChhhHHHHHhhhcCC
Q 041528           92 TLTSQQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        92 ~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      +|+|+|||+|.+||++|.+.++|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            699999999999999999999999999999985

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=4.4e-13  Score=83.18  Aligned_cols=32  Identities=19%  Similarity=0.260  Sum_probs=29.2

Q ss_pred             cccCCCCCccCCCcCccccchhhhcccccccc
Q 041528          453 LGSKKSKGHECPFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       453 ~~Ht~ekp~~C~iC~k~F~~~~~L~~H~r~H~  484 (527)
                      |+|||||||+|++|+|+|+++.+|++|++.|.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            58999999999999999999999999976543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.7e-12  Score=80.68  Aligned_cols=35  Identities=23%  Similarity=0.423  Sum_probs=33.0

Q ss_pred             hhccCCCccccccccccccChhhHHHHHhhhcCCC
Q 041528           91 NTLTSQQEMVCKECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        91 ~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      |+|+|+|||+|++||++|.+.++|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            68999999999999999999999999999999764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=3.9e-13  Score=77.69  Aligned_cols=28  Identities=32%  Similarity=0.600  Sum_probs=27.2

Q ss_pred             CCCccCCCcCccccchhhhccccccccc
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      ||||+|++|+|+|.++.+|.+|||+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7999999999999999999999999987

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=1.9e-12  Score=81.06  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=33.5

Q ss_pred             hhhhccCCCccccccccccccChhhHHHHHhhhcC
Q 041528           89 DSNTLTSQQEMVCKECGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        89 H~~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      |.|+|+|+|||+|++||++|.+.++|++|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            78999999999999999999999999999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.19  E-value=1.9e-12  Score=75.86  Aligned_cols=29  Identities=31%  Similarity=0.518  Sum_probs=27.6

Q ss_pred             CCccCCCcCccccchhhhcccccccccCC
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      |||.|++|||+|+++.+|++|||+|+||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            79999999999999999999999999973

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=4.1e-12  Score=79.85  Aligned_cols=37  Identities=24%  Similarity=0.563  Sum_probs=34.3

Q ss_pred             CCCceecccCCCccCCchhHHHHhh-hhcCCCCcccccc
Q 041528            7 KKKLFVCKYCNKRYPCGKSLGGHIR-THMNNGNSAEAEG   44 (527)
Q Consensus         7 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~p~~~C~~   44 (527)
                      -+|||+|.+|||.|...+.|.+|++ +|++++|| .|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy-~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH-KCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCC-CSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCc-CCcC
Confidence            4799999999999999999999986 79999999 8874

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.18  E-value=1.3e-12  Score=86.34  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=38.0

Q ss_pred             CccccccccccCCCCCccCCC--cCccccchhhhcccccccccCC
Q 041528          445 LSTNVDKRLGSKKSKGHECPF--CFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       445 ~~~l~~h~~~Ht~ekp~~C~i--C~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      .+.+.+|+. |+|||||.|++  |+|+|.++++|..||++|+|+.
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            456778885 99999999998  9999999999999999999973

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.17  E-value=5.3e-12  Score=77.21  Aligned_cols=32  Identities=19%  Similarity=0.506  Sum_probs=30.6

Q ss_pred             ccCCCccccccccccccChhhHHHHHhhhcCC
Q 041528           93 LTSQQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        93 h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      |+|+|||+|++|+++|.+.++|++|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            79999999999999999999999999999864

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=4.1e-12  Score=79.83  Aligned_cols=28  Identities=32%  Similarity=0.684  Sum_probs=23.9

Q ss_pred             CCccccccccccccCccccccccc-cCCC
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHTA-SHSK  401 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~~-~H~~  401 (527)
                      ++||.|++|||.|...++|.+||+ +|++
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~   31 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTS   31 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCC
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCC
Confidence            588999999999999999999975 6777

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=5.1e-12  Score=73.78  Aligned_cols=29  Identities=28%  Similarity=0.482  Sum_probs=27.5

Q ss_pred             CCccCCCcCccccchhhhcccccccccCC
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      |||.|++|||+|.++++|.+|+|+|+|+.
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            79999999999999999999999999973

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2e-11  Score=75.52  Aligned_cols=32  Identities=16%  Similarity=0.254  Sum_probs=29.1

Q ss_pred             hhccCCCccccccccccccChhhHHHHHhhhc
Q 041528           91 NTLTSQQEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        91 ~~h~~~k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      |+|+|+|||+|++||++|.+.++|++|++.++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            57999999999999999999999999985444

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=2e-11  Score=70.42  Aligned_cols=28  Identities=25%  Similarity=0.535  Sum_probs=27.0

Q ss_pred             CCccccccccccccChhhHHHHHhhhcC
Q 041528           96 QQEMVCKECGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      ||||+|++||++|.+..+|.+|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.04  E-value=4e-11  Score=70.09  Aligned_cols=29  Identities=24%  Similarity=0.595  Sum_probs=27.7

Q ss_pred             CccccccccccccChhhHHHHHhhhcCCC
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      |||+|++||++|.+.++|++|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999874

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2.3e-11  Score=71.37  Aligned_cols=28  Identities=36%  Similarity=0.616  Sum_probs=27.0

Q ss_pred             CCccCCC--cCccccchhhhcccccccccC
Q 041528          459 KGHECPF--CFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       459 kp~~C~i--C~k~F~~~~~L~~H~r~H~~~  486 (527)
                      |||.|++  |||+|.++++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            7999999  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.9e-11  Score=71.89  Aligned_cols=28  Identities=32%  Similarity=0.485  Sum_probs=26.9

Q ss_pred             CCccCCC--cCccccchhhhcccccccccC
Q 041528          459 KGHECPF--CFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       459 kp~~C~i--C~k~F~~~~~L~~H~r~H~~~  486 (527)
                      |||.|++  |||+|+++++|++|||+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            7999998  999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.8e-11  Score=68.64  Aligned_cols=26  Identities=31%  Similarity=0.482  Sum_probs=25.2

Q ss_pred             CCccCCCcCccccchhhhcccccccc
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~  484 (527)
                      |||+|+.|||+|..+++|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999996

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=9.5e-11  Score=68.29  Aligned_cols=29  Identities=31%  Similarity=0.630  Sum_probs=27.6

Q ss_pred             CccccccccccccChhhHHHHHhhhcCCC
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      |||.|++||++|.+.++|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999874

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2e-10  Score=64.31  Aligned_cols=26  Identities=35%  Similarity=0.675  Sum_probs=25.1

Q ss_pred             CccccccccccccChhhHHHHHhhhc
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      |||+|++|||+|.+.++|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999995

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=1.7e-10  Score=68.43  Aligned_cols=29  Identities=28%  Similarity=0.540  Sum_probs=26.7

Q ss_pred             CCccCC--CcCccccchhhhcccccccccCC
Q 041528          459 KGHECP--FCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       459 kp~~C~--iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      |||.|+  .|||+|++..+|++|||+|+|+.
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            799996  59999999999999999999973

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.89  E-value=2.1e-10  Score=75.51  Aligned_cols=39  Identities=18%  Similarity=0.224  Sum_probs=34.8

Q ss_pred             cchhhhhccCCCcccccc--ccccccChhhHHHHHhhhcCCC
Q 041528           86 RFVDSNTLTSQQEMVCKE--CGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        86 ~~~H~~~h~~~k~~~C~~--Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      +..|+ .|++++||+|.+  |+++|...++|+.|+++|+|++
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            44466 499999999988  9999999999999999999874

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.88  E-value=2.7e-10  Score=67.81  Aligned_cols=30  Identities=27%  Similarity=0.445  Sum_probs=27.9

Q ss_pred             CCCccCCC--cCccccchhhhcccccccccCC
Q 041528          458 SKGHECPF--CFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       458 ekp~~C~i--C~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      ||||.|++  |+|+|++..+|++|+++|+..+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~ks   32 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCCC
Confidence            79999999  9999999999999999998753

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=4.2e-10  Score=59.40  Aligned_cols=26  Identities=31%  Similarity=0.561  Sum_probs=25.0

Q ss_pred             CccCCCcCccccchhhhccccccccc
Q 041528          460 GHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      |++|++|+|.|.++..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            78999999999999999999999986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=2.7e-10  Score=66.11  Aligned_cols=27  Identities=33%  Similarity=0.541  Sum_probs=25.9

Q ss_pred             CCccCCC--cCccccchhhhccccccccc
Q 041528          459 KGHECPF--CFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       459 kp~~C~i--C~k~F~~~~~L~~H~r~H~~  485 (527)
                      |||.|++  |+|+|++..+|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            7999988  99999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.1e-09  Score=67.27  Aligned_cols=32  Identities=28%  Similarity=0.567  Sum_probs=30.3

Q ss_pred             eeccc--CCCccCCchhHHHHhhhhcCCCCccccc
Q 041528           11 FVCKY--CNKRYPCGKSLGGHIRTHMNNGNSAEAE   43 (527)
Q Consensus        11 ~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~~C~   43 (527)
                      |.|+.  |+|.|...+.|++|+++|+|++|| .|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy-~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDY-ICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCC-SCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCE-eCC
Confidence            78987  999999999999999999999999 886

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.1e-09  Score=64.26  Aligned_cols=28  Identities=29%  Similarity=0.470  Sum_probs=26.7

Q ss_pred             Ccccccc--ccccccChhhHHHHHhhhcCC
Q 041528           97 QEMVCKE--CGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        97 k~~~C~~--Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      |||.|++  ||++|.+.++|++|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999998  999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.4e-09  Score=63.62  Aligned_cols=28  Identities=25%  Similarity=0.533  Sum_probs=26.8

Q ss_pred             Ccccccc--ccccccChhhHHHHHhhhcCC
Q 041528           97 QEMVCKE--CGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        97 k~~~C~~--Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      |||+|++  ||++|.+.++|++|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999999  999999999999999999985

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=6e-10  Score=63.77  Aligned_cols=26  Identities=31%  Similarity=0.636  Sum_probs=25.0

Q ss_pred             CCccCCC--cCccccchhhhcccccccc
Q 041528          459 KGHECPF--CFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       459 kp~~C~i--C~k~F~~~~~L~~H~r~H~  484 (527)
                      |||.|++  |||+|++..+|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7999999  9999999999999999996

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=3.2e-09  Score=62.77  Aligned_cols=29  Identities=28%  Similarity=0.558  Sum_probs=26.7

Q ss_pred             Ccccccc--ccccccChhhHHHHHhhhcCCC
Q 041528           97 QEMVCKE--CGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus        97 k~~~C~~--Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      |||.|++  ||++|.+.++|++|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6999965  9999999999999999999874

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=1.5e-09  Score=59.34  Aligned_cols=27  Identities=26%  Similarity=0.509  Sum_probs=26.0

Q ss_pred             CCCccCCCcCccccchhhhcccccccc
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~  484 (527)
                      ||||.|++||+.|.++...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            699999999999999999999999995

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=2.8e-09  Score=56.21  Aligned_cols=26  Identities=31%  Similarity=0.554  Sum_probs=24.6

Q ss_pred             ccccccccccccCccccccccccCCC
Q 041528          376 QFKCLTCNKVFHSPRSLWGHTASHSK  401 (527)
Q Consensus       376 ~~~C~~Cgk~F~~~~~L~~H~~~H~~  401 (527)
                      |++|++|||.|+.+..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.58  E-value=1.4e-08  Score=60.19  Aligned_cols=29  Identities=31%  Similarity=0.573  Sum_probs=27.3

Q ss_pred             CCcccccc--ccccccChhhHHHHHhhhcCC
Q 041528           96 QQEMVCKE--CGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        96 ~k~~~C~~--Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      ||||.|++  ||++|.+..+|++|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999999  999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.55  E-value=1.1e-08  Score=59.11  Aligned_cols=27  Identities=22%  Similarity=0.524  Sum_probs=25.8

Q ss_pred             Ccccccc--ccccccChhhHHHHHhhhcC
Q 041528           97 QEMVCKE--CGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        97 k~~~C~~--Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      |||+|++  ||++|.+..+|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999999  99999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=2.2e-08  Score=57.17  Aligned_cols=26  Identities=31%  Similarity=0.575  Sum_probs=24.9

Q ss_pred             Ccccccc--ccccccChhhHHHHHhhhc
Q 041528           97 QEMVCKE--CGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        97 k~~~C~~--Cgk~F~~~~~L~~H~~~H~  122 (527)
                      |||.|++  ||++|.+..+|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999999  9999999999999999996

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=5.9e-08  Score=59.42  Aligned_cols=32  Identities=38%  Similarity=0.626  Sum_probs=28.8

Q ss_pred             cccccc--ccccccChhhHHHHHhhhcCCCCCCC
Q 041528           98 EMVCKE--CGKVFQSLKALCGHMACHSEKDNKMK  129 (527)
Q Consensus        98 ~~~C~~--Cgk~F~~~~~L~~H~~~H~~~~~~~~  129 (527)
                      .|.|++  ||++|.+..+|++|+++|+|++|+.+
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            378887  99999999999999999999999864

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=3e-08  Score=54.94  Aligned_cols=30  Identities=33%  Similarity=0.401  Sum_probs=28.1

Q ss_pred             CCCccCCCcCccccchhhhcccccccccCC
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      ||||.|+||+.+|.++..+..|.|.|-|+-
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~v   30 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSV   30 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCcc
Confidence            699999999999999999999999998764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=1.3e-07  Score=51.61  Aligned_cols=27  Identities=22%  Similarity=0.490  Sum_probs=25.8

Q ss_pred             CCccccccccccccChhhHHHHHhhhc
Q 041528           96 QQEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      +|||.|++||+.|...-..++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999995

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=5.5e-07  Score=48.40  Aligned_cols=28  Identities=25%  Similarity=0.502  Sum_probs=25.7

Q ss_pred             CceecccCCCccCCchhHHHHhhhhcCC
Q 041528            9 KLFVCKYCNKRYPCGKSLGGHIRTHMNN   36 (527)
Q Consensus         9 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~   36 (527)
                      +.+.|..|||.|..++.|++|+.+|+|+
T Consensus         1 r~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           1 RVHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             CcchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            3578999999999999999999999985

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.14  E-value=2.9e-07  Score=55.32  Aligned_cols=32  Identities=41%  Similarity=0.741  Sum_probs=28.8

Q ss_pred             CCCccCCCcCccccchhhhcccccccccCCCC
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHFVGGSE  489 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~~~~~~  489 (527)
                      .+.|+|.+|+|.|.+.++|-.||+.|.-+.+.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~~   34 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   34 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHHH
Confidence            46799999999999999999999999877664

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=4.5e-07  Score=48.99  Aligned_cols=29  Identities=24%  Similarity=0.379  Sum_probs=27.5

Q ss_pred             CCCccCCCcCccccchhhhcccccccccC
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      |+||+|.+|..+-+.++.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            68999999999999999999999999984

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=6.1e-07  Score=48.21  Aligned_cols=27  Identities=26%  Similarity=0.364  Sum_probs=24.0

Q ss_pred             CccCCCcCccccchhhhcccccccccC
Q 041528          460 GHECPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      -+.|..|||+|..++.|++|.-+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            467999999999999999999999885

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1e-06  Score=49.90  Aligned_cols=32  Identities=22%  Similarity=0.347  Sum_probs=29.7

Q ss_pred             CCceecccCCCccCCchhHHHHhhhhcCCCCc
Q 041528            8 KKLFVCKYCNKRYPCGKSLGGHIRTHMNNGNS   39 (527)
Q Consensus         8 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~   39 (527)
                      .+...|..|||.|.....|.+|...|++++||
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            35678999999999999999999999999998

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.3e-06  Score=48.29  Aligned_cols=29  Identities=21%  Similarity=0.488  Sum_probs=27.2

Q ss_pred             CCccccccccccccChhhHHHHHhhhcCC
Q 041528           96 QQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      +|||+|++|+..|..+-.+.-|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999864

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.97  E-value=6.1e-07  Score=53.86  Aligned_cols=30  Identities=27%  Similarity=0.589  Sum_probs=27.6

Q ss_pred             CCccccccccccccCccccccccccCCCCC
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHTASHSKIN  403 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~~  403 (527)
                      .+.|+|.+|+|.|.+-.+|-.||++|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            467999999999999999999999998765

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.89  E-value=1.3e-06  Score=46.24  Aligned_cols=26  Identities=38%  Similarity=0.575  Sum_probs=24.1

Q ss_pred             cCCCcCccccchhhhcccccccccCC
Q 041528          462 ECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       462 ~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      +|++|.|.|.++..|+.|-|.|+|+.
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999873

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=4.3e-06  Score=47.29  Aligned_cols=31  Identities=29%  Similarity=0.624  Sum_probs=28.5

Q ss_pred             CccccccccccccChhhHHHHHhhhcCCCCC
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHSEKDNK  127 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~~~~~~  127 (527)
                      +...|++||+.|+....|.+|.-.|++++|+
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4567999999999999999999999999986

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=1.7e-06  Score=46.32  Aligned_cols=27  Identities=26%  Similarity=0.304  Sum_probs=25.6

Q ss_pred             CCccCCCcCccccchhhhccccccccc
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      |||+|..|..+-...++|+.|+|+|..
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs~   28 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHSD   28 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCcccccccchhcchhhHhhhhhcccC
Confidence            799999999999999999999999973

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=8.2e-06  Score=44.30  Aligned_cols=28  Identities=32%  Similarity=0.542  Sum_probs=26.1

Q ss_pred             ceecccCCCccCCchhHHHHhhhhcCCC
Q 041528           10 LFVCKYCNKRYPCGKSLGGHIRTHMNNG   37 (527)
Q Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~   37 (527)
                      .|.|+.||...+..+-|+.|||.|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3899999999999999999999999875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=9.5e-06  Score=43.73  Aligned_cols=29  Identities=24%  Similarity=0.527  Sum_probs=27.2

Q ss_pred             CCceecccCCCccCCchhHHHHhhhhcCC
Q 041528            8 KKLFVCKYCNKRYPCGKSLGGHIRTHMNN   36 (527)
Q Consensus         8 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   36 (527)
                      ++||+|.+|...-..++.|..|+|.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            68999999999999999999999999974

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=3.5e-06  Score=46.62  Aligned_cols=27  Identities=19%  Similarity=0.381  Sum_probs=24.6

Q ss_pred             CCccCCC--cCccccchhhhccccccccc
Q 041528          459 KGHECPF--CFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       459 kp~~C~i--C~k~F~~~~~L~~H~r~H~~  485 (527)
                      |||.|.+  |+|+++..++|..||+.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6999998  99999999999999997654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.69  E-value=1.1e-05  Score=41.83  Aligned_cols=24  Identities=29%  Similarity=0.526  Sum_probs=23.0

Q ss_pred             cccccccccccChhhHHHHHhhhc
Q 041528           99 MVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        99 ~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      |+|.+|.++|..++.|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999996

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.1e-05  Score=44.67  Aligned_cols=27  Identities=26%  Similarity=0.453  Sum_probs=24.5

Q ss_pred             Ccccccc--ccccccChhhHHHHHhhhcC
Q 041528           97 QEMVCKE--CGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        97 k~~~C~~--Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      |||.|.+  |+++|...+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899999  99999999999999997653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.52  E-value=2.6e-05  Score=41.14  Aligned_cols=26  Identities=31%  Similarity=0.365  Sum_probs=24.4

Q ss_pred             ccccccccccChhhHHHHHhhhcCCC
Q 041528          100 VCKECGKVFQSLKALCGHMACHSEKD  125 (527)
Q Consensus       100 ~C~~Cgk~F~~~~~L~~H~~~H~~~~  125 (527)
                      +|+.|.++|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999874

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=2.6e-05  Score=46.70  Aligned_cols=27  Identities=22%  Similarity=0.406  Sum_probs=24.7

Q ss_pred             cCCCccccccccccccChhhHHHHHhh
Q 041528           94 TSQQEMVCKECGKVFQSLKALCGHMAC  120 (527)
Q Consensus        94 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~  120 (527)
                      +|.|||.|.+|||.|.+.-.+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            588999999999999999999999854

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.46  E-value=1.8e-05  Score=44.15  Aligned_cols=29  Identities=24%  Similarity=0.342  Sum_probs=25.4

Q ss_pred             CccCCCcCccccchhhhccc-ccccccCCC
Q 041528          460 GHECPFCFRVFKSGQALGGH-KRSHFVGGS  488 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H-~r~H~~~~~  488 (527)
                      ||.|.+|++.|+++.-|.+| .+.|.|.-+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~cg   30 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGNLG   30 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCSSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCcCC
Confidence            79999999999999999999 667877543

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=1.8e-05  Score=42.89  Aligned_cols=27  Identities=26%  Similarity=0.144  Sum_probs=24.6

Q ss_pred             ccCCCcCccccchhhhcccccccccCC
Q 041528          461 HECPFCFRVFKSGQALGGHKRSHFVGG  487 (527)
Q Consensus       461 ~~C~iC~k~F~~~~~L~~H~r~H~~~~  487 (527)
                      |.|+.||.+-...+-|+.|.|+|+++.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999863

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.42  E-value=1.7e-05  Score=41.17  Aligned_cols=25  Identities=28%  Similarity=0.596  Sum_probs=23.4

Q ss_pred             cccccccccccCccccccccccCCC
Q 041528          377 FKCLTCNKVFHSPRSLWGHTASHSK  401 (527)
Q Consensus       377 ~~C~~Cgk~F~~~~~L~~H~~~H~~  401 (527)
                      |+|..|.+.|-.+++|.+|+|+|.+
T Consensus         1 ykcglcersfveksalsrhqrvhkn   25 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHKN   25 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhcc
Confidence            7899999999999999999999963

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.37  E-value=1e-05  Score=43.76  Aligned_cols=29  Identities=28%  Similarity=0.500  Sum_probs=26.9

Q ss_pred             CCccccccccccccCccccccccccCCCC
Q 041528          374 RSQFKCLTCNKVFHSPRSLWGHTASHSKI  402 (527)
Q Consensus       374 ~~~~~C~~Cgk~F~~~~~L~~H~~~H~~~  402 (527)
                      +..|.|.+|...|..+-.|+.||.+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            35799999999999999999999999985

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=4.7e-05  Score=45.61  Aligned_cols=26  Identities=27%  Similarity=0.558  Sum_probs=24.0

Q ss_pred             cCCCceecccCCCccCCchhHHHHhh
Q 041528            6 QKKKLFVCKYCNKRYPCGKSLGGHIR   31 (527)
Q Consensus         6 ~~~~~~~C~~C~k~f~~~~~L~~H~~   31 (527)
                      +|-+||.|..|+|.|.++.++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            57899999999999999999999974

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.31  E-value=5.5e-05  Score=40.83  Aligned_cols=26  Identities=27%  Similarity=0.425  Sum_probs=23.8

Q ss_pred             Ccccccc--ccccccChhhHHHHHhhhc
Q 041528           97 QEMVCKE--CGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        97 k~~~C~~--Cgk~F~~~~~L~~H~~~H~  122 (527)
                      .||+|+.  |+++|...+.|++|.++|+
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            5899987  9999999999999999984

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=2.8e-05  Score=43.36  Aligned_cols=28  Identities=25%  Similarity=0.469  Sum_probs=23.1

Q ss_pred             CCccCCC--cCccccchhhhcccc-cccccC
Q 041528          459 KGHECPF--CFRVFKSGQALGGHK-RSHFVG  486 (527)
Q Consensus       459 kp~~C~i--C~k~F~~~~~L~~H~-r~H~~~  486 (527)
                      |||.|.+  |.|+|...+..-.|. |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6888888  999998888888886 888754

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=0.0001  Score=39.81  Aligned_cols=29  Identities=28%  Similarity=0.529  Sum_probs=26.7

Q ss_pred             CCccccccccccccChhhHHHHHhhhcCC
Q 041528           96 QQEMVCKECGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      +..|.|.+|...|+....|+.||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999999875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.0001  Score=39.27  Aligned_cols=27  Identities=26%  Similarity=0.437  Sum_probs=25.4

Q ss_pred             CCccccccccccccChhhHHHHHhhhc
Q 041528           96 QQEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        96 ~k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      .+||+|..|...-...+.|+.|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            379999999999999999999999996

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.18  E-value=2.8e-05  Score=42.20  Aligned_cols=28  Identities=29%  Similarity=0.311  Sum_probs=25.1

Q ss_pred             CCccCC--CcCccccchhhhcccccccccC
Q 041528          459 KGHECP--FCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       459 kp~~C~--iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      |||.|.  -|.|.|.+...|.+|.-+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            688885  5999999999999999999985

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=5.2e-05  Score=41.07  Aligned_cols=23  Identities=30%  Similarity=0.553  Sum_probs=21.8

Q ss_pred             CccCCCcCccccchhhhcccccc
Q 041528          460 GHECPFCFRVFKSGQALGGHKRS  482 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~r~  482 (527)
                      ||.|..|.-+|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999985

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00018  Score=38.89  Aligned_cols=25  Identities=24%  Similarity=0.460  Sum_probs=22.5

Q ss_pred             ccccccccccccChhhHHHHHhhhc
Q 041528           98 EMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        98 ~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      ||.|..|..+|.+++||-.||+..+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            7999999999999999999997543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.91  E-value=0.00025  Score=38.42  Aligned_cols=28  Identities=36%  Similarity=0.561  Sum_probs=25.6

Q ss_pred             Cceeccc--CCCccCCchhHHHHhhhhcCC
Q 041528            9 KLFVCKY--CNKRYPCGKSLGGHIRTHMNN   36 (527)
Q Consensus         9 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~   36 (527)
                      +||.|..  |.|.|.+-..|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            6899975  999999999999999999885

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00028  Score=39.21  Aligned_cols=28  Identities=32%  Similarity=0.663  Sum_probs=25.0

Q ss_pred             Cceeccc--CCCccCCchhHHHHh-hhhcCC
Q 041528            9 KLFVCKY--CNKRYPCGKSLGGHI-RTHMNN   36 (527)
Q Consensus         9 ~~~~C~~--C~k~f~~~~~L~~H~-~~H~~~   36 (527)
                      |||.|.+  |.|.|++.+.--.|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6999988  999999999999998 888653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.77  E-value=0.0003  Score=39.10  Aligned_cols=26  Identities=27%  Similarity=0.473  Sum_probs=23.8

Q ss_pred             ccccccccccccChhhHHHHH-hhhcC
Q 041528           98 EMVCKECGKVFQSLKALCGHM-ACHSE  123 (527)
Q Consensus        98 ~~~C~~Cgk~F~~~~~L~~H~-~~H~~  123 (527)
                      ||.|.+|++.|...--|.+|. +.|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999998 67775

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.00059  Score=37.05  Aligned_cols=28  Identities=36%  Similarity=0.714  Sum_probs=24.5

Q ss_pred             CceecccCCCccCCchhHHHHhhh-hcCC
Q 041528            9 KLFVCKYCNKRYPCGKSLGGHIRT-HMNN   36 (527)
Q Consensus         9 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~~   36 (527)
                      +||+|.+|...-..+++|+.|+.+ |..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            699999999999999999999986 5443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.65  E-value=0.0004  Score=37.40  Aligned_cols=25  Identities=28%  Similarity=0.604  Sum_probs=23.1

Q ss_pred             Cceeccc--CCCccCCchhHHHHhhhh
Q 041528            9 KLFVCKY--CNKRYPCGKSLGGHIRTH   33 (527)
Q Consensus         9 ~~~~C~~--C~k~f~~~~~L~~H~~~H   33 (527)
                      .||.|++  |+|.|...+.|++|-++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899986  999999999999999887

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00072  Score=36.69  Aligned_cols=26  Identities=15%  Similarity=0.241  Sum_probs=23.4

Q ss_pred             CccccccccccccChhhHHHHHhhhc
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      +||+|..|...-...+||+.|+++.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            69999999999999999999996544

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0009  Score=36.25  Aligned_cols=26  Identities=19%  Similarity=0.296  Sum_probs=23.2

Q ss_pred             CccccccccccccChhhHHHHHhhhc
Q 041528           97 QEMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        97 k~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      +||+|++|..--.+.+||..|++.-+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            69999999999999999999996543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.00044  Score=40.83  Aligned_cols=28  Identities=32%  Similarity=0.476  Sum_probs=25.9

Q ss_pred             CCCCccC--CCcCccccchhhhcccccccc
Q 041528          457 KSKGHEC--PFCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       457 ~ekp~~C--~iC~k~F~~~~~L~~H~r~H~  484 (527)
                      .+|||.|  +=|+.+|.+...|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            5899999  789999999999999999885

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.18  E-value=0.00038  Score=36.11  Aligned_cols=22  Identities=32%  Similarity=0.856  Sum_probs=20.4

Q ss_pred             ccCCCcCccccchhhhcccccc
Q 041528          461 HECPFCFRVFKSGQALGGHKRS  482 (527)
Q Consensus       461 ~~C~iC~k~F~~~~~L~~H~r~  482 (527)
                      |.|++|.|.|+++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.18  E-value=0.0012  Score=34.06  Aligned_cols=21  Identities=33%  Similarity=0.645  Sum_probs=20.4

Q ss_pred             ccccccccccccChhhHHHHH
Q 041528           98 EMVCKECGKVFQSLKALCGHM  118 (527)
Q Consensus        98 ~~~C~~Cgk~F~~~~~L~~H~  118 (527)
                      ||+|.-|...|.++..|..||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            899999999999999999998

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0032  Score=37.09  Aligned_cols=28  Identities=29%  Similarity=0.577  Sum_probs=25.3

Q ss_pred             CCCceec--ccCCCccCCchhHHHHhhhhc
Q 041528            7 KKKLFVC--KYCNKRYPCGKSLGGHIRTHM   34 (527)
Q Consensus         7 ~~~~~~C--~~C~k~f~~~~~L~~H~~~H~   34 (527)
                      .+|||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            5899999  669999999999999988775

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.40  E-value=0.0016  Score=33.60  Aligned_cols=22  Identities=23%  Similarity=0.406  Sum_probs=20.7

Q ss_pred             CccCCCcCccccchhhhccccc
Q 041528          460 GHECPFCFRVFKSGQALGGHKR  481 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~r  481 (527)
                      ||+|..|...|-.+..|+.||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999974

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.36  E-value=0.0025  Score=33.69  Aligned_cols=21  Identities=29%  Similarity=0.550  Sum_probs=19.6

Q ss_pred             CccCCCcCccccchhhhcccc
Q 041528          460 GHECPFCFRVFKSGQALGGHK  480 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~  480 (527)
                      ||+|..|||.+-++.+|..|-
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            799999999999999999884

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.28  E-value=0.0047  Score=33.39  Aligned_cols=25  Identities=24%  Similarity=0.582  Sum_probs=22.8

Q ss_pred             CceecccCCCccCCchhHHHHhhhh
Q 041528            9 KLFVCKYCNKRYPCGKSLGGHIRTH   33 (527)
Q Consensus         9 ~~~~C~~C~k~f~~~~~L~~H~~~H   33 (527)
                      +||+|.+|..--+..++|..|++.-
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHH
Confidence            6999999999999999999999753

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.97  E-value=0.0073  Score=32.13  Aligned_cols=25  Identities=32%  Similarity=0.361  Sum_probs=23.2

Q ss_pred             ccccccccccccChhhHHHHHhhhc
Q 041528           98 EMVCKECGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        98 ~~~C~~Cgk~F~~~~~L~~H~~~H~  122 (527)
                      |-+|+.|..+-..+..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999995

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.95  E-value=0.0047  Score=38.20  Aligned_cols=26  Identities=31%  Similarity=0.496  Sum_probs=23.4

Q ss_pred             CccCCCcCccccchhhhccccccccc
Q 041528          460 GHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      -|.|-+|||.|+....|+.|-.-|-.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            58899999999999999999888754

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.81  E-value=0.0028  Score=36.50  Aligned_cols=24  Identities=33%  Similarity=0.344  Sum_probs=18.4

Q ss_pred             CCCcCccccchhhhcccccccccC
Q 041528          463 CPFCFRVFKSGQALGGHKRSHFVG  486 (527)
Q Consensus       463 C~iC~k~F~~~~~L~~H~r~H~~~  486 (527)
                      |+-=++.|..++.|..|||+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333456688899999999999886

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.50  E-value=0.011  Score=32.38  Aligned_cols=28  Identities=21%  Similarity=0.553  Sum_probs=24.7

Q ss_pred             Ccccccc--ccccccChhhHHHHHhhhcCC
Q 041528           97 QEMVCKE--CGKVFQSLKALCGHMACHSEK  124 (527)
Q Consensus        97 k~~~C~~--Cgk~F~~~~~L~~H~~~H~~~  124 (527)
                      |.|.|.+  |+..|...+.|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4577776  999999999999999999975

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.32  E-value=0.0022  Score=36.99  Aligned_cols=24  Identities=21%  Similarity=0.221  Sum_probs=19.9

Q ss_pred             cccccccccCccccccccccCCCC
Q 041528          379 CLTCNKVFHSPRSLWGHTASHSKI  402 (527)
Q Consensus       379 C~~Cgk~F~~~~~L~~H~~~H~~~  402 (527)
                      |.-=++-|..+..|..|||+||||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            334456799999999999999986

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.21  E-value=0.012  Score=31.01  Aligned_cols=21  Identities=29%  Similarity=0.626  Sum_probs=19.8

Q ss_pred             ccccccccccccChhhHHHHH
Q 041528           98 EMVCKECGKVFQSLKALCGHM  118 (527)
Q Consensus        98 ~~~C~~Cgk~F~~~~~L~~H~  118 (527)
                      ||+|.-||+.|-.+-+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            799999999999999999996

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.83  E-value=0.015  Score=29.98  Aligned_cols=22  Identities=23%  Similarity=0.401  Sum_probs=20.5

Q ss_pred             cccccccccccChhhHHHHHhh
Q 041528           99 MVCKECGKVFQSLKALCGHMAC  120 (527)
Q Consensus        99 ~~C~~Cgk~F~~~~~L~~H~~~  120 (527)
                      |.|++|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999865

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.016  Score=32.71  Aligned_cols=27  Identities=22%  Similarity=0.533  Sum_probs=23.8

Q ss_pred             ceecccCCCccCCchhHHHHhhhhcCC
Q 041528           10 LFVCKYCNKRYPCGKSLGGHIRTHMNN   36 (527)
Q Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~~~   36 (527)
                      .|+|..|+|+|..+..+.+|....+|.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            599999999999999999998776653

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.011  Score=31.40  Aligned_cols=26  Identities=31%  Similarity=0.390  Sum_probs=23.2

Q ss_pred             CccCCCcCccccchhhhccccccccc
Q 041528          460 GHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      |-+|+.|...-.++.+|+.|-|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            55799999999999999999999954

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.29  E-value=0.03  Score=30.12  Aligned_cols=25  Identities=20%  Similarity=0.490  Sum_probs=22.0

Q ss_pred             ceecccCCCccCCchhHHHHhhhhc
Q 041528           10 LFVCKYCNKRYPCGKSLGGHIRTHM   34 (527)
Q Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~H~   34 (527)
                      -|.|.+|||-.++...++.|+..-+
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            4899999999999999999997643

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.18  E-value=0.021  Score=35.22  Aligned_cols=26  Identities=38%  Similarity=0.595  Sum_probs=23.5

Q ss_pred             ccccccccccccChhhHHHHHhhhcC
Q 041528           98 EMVCKECGKVFQSLKALCGHMACHSE  123 (527)
Q Consensus        98 ~~~C~~Cgk~F~~~~~L~~H~~~H~~  123 (527)
                      -|.|-+|||.|.....|++|..-|--
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            47899999999999999999988863

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.12  E-value=0.022  Score=29.88  Aligned_cols=24  Identities=38%  Similarity=0.671  Sum_probs=20.4

Q ss_pred             ccccc--ccccccChhhHHHHHhhhc
Q 041528           99 MVCKE--CGKVFQSLKALCGHMACHS  122 (527)
Q Consensus        99 ~~C~~--Cgk~F~~~~~L~~H~~~H~  122 (527)
                      |.|.+  |++.|.....|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45544  9999999999999998886

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.07  E-value=0.023  Score=30.06  Aligned_cols=23  Identities=22%  Similarity=0.430  Sum_probs=20.9

Q ss_pred             ccccccccccccChhhHHHHHhh
Q 041528           98 EMVCKECGKVFQSLKALCGHMAC  120 (527)
Q Consensus        98 ~~~C~~Cgk~F~~~~~L~~H~~~  120 (527)
                      .|+|+.|+-....++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            48999999999999999999963

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.70  E-value=0.028  Score=29.72  Aligned_cols=23  Identities=30%  Similarity=0.598  Sum_probs=21.3

Q ss_pred             ceecccCCCccCCchhHHHHhhh
Q 041528           10 LFVCKYCNKRYPCGKSLGGHIRT   32 (527)
Q Consensus        10 ~~~C~~C~k~f~~~~~L~~H~~~   32 (527)
                      .|+|++|+-....++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            58999999999999999999974

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.50  E-value=0.027  Score=29.52  Aligned_cols=24  Identities=29%  Similarity=0.589  Sum_probs=20.9

Q ss_pred             eecc--cCCCccCCchhHHHHhhhhc
Q 041528           11 FVCK--YCNKRYPCGKSLGGHIRTHM   34 (527)
Q Consensus        11 ~~C~--~C~k~f~~~~~L~~H~~~H~   34 (527)
                      |.|.  -|+|.|+....|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            6775  49999999999999998875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.80  E-value=0.025  Score=31.92  Aligned_cols=27  Identities=15%  Similarity=0.304  Sum_probs=22.9

Q ss_pred             CCccCCCcCccccchhhhccccccccc
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRSHFV  485 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~H~~  485 (527)
                      ..|.|..|||.|+++-.+.+|-..-+|
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCC
Confidence            358999999999999999999766555

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.81  E-value=0.021  Score=39.20  Aligned_cols=26  Identities=27%  Similarity=0.506  Sum_probs=23.4

Q ss_pred             cCCccccccccccccCcccccccccc
Q 041528          373 KRSQFKCLTCNKVFHSPRSLWGHTAS  398 (527)
Q Consensus       373 ~~~~~~C~~Cgk~F~~~~~L~~H~~~  398 (527)
                      +.+.|.|-+|+|.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            34679999999999999999999877

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.96  E-value=0.034  Score=29.60  Aligned_cols=20  Identities=25%  Similarity=0.486  Sum_probs=18.1

Q ss_pred             CcCccccchhhhcccccccc
Q 041528          465 FCFRVFKSGQALGGHKRSHF  484 (527)
Q Consensus       465 iC~k~F~~~~~L~~H~r~H~  484 (527)
                      -|+|.|+..+++..|+-+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            49999999999999999884

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.07  E-value=0.088  Score=29.76  Aligned_cols=28  Identities=25%  Similarity=0.767  Sum_probs=23.3

Q ss_pred             CCCccccccccccccChhhHHHHH-hhhc
Q 041528           95 SQQEMVCKECGKVFQSLKALCGHM-ACHS  122 (527)
Q Consensus        95 ~~k~~~C~~Cgk~F~~~~~L~~H~-~~H~  122 (527)
                      |+-.|.|.+|.++|.+-+|+.+|. ..|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            345699999999999999999998 4443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.96  E-value=0.027  Score=29.98  Aligned_cols=20  Identities=25%  Similarity=0.596  Sum_probs=18.3

Q ss_pred             cccccccCccccccccccCC
Q 041528          381 TCNKVFHSPRSLWGHTASHS  400 (527)
Q Consensus       381 ~Cgk~F~~~~~L~~H~~~H~  400 (527)
                      -|+|.|...++++.|+-+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            49999999999999998884

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.81  E-value=0.17  Score=30.91  Aligned_cols=27  Identities=26%  Similarity=0.436  Sum_probs=24.0

Q ss_pred             cCCCccccccccccccChhhHHHHHhh
Q 041528           94 TSQQEMVCKECGKVFQSLKALCGHMAC  120 (527)
Q Consensus        94 ~~~k~~~C~~Cgk~F~~~~~L~~H~~~  120 (527)
                      ..+.|-.|++|+...++..||++|+..
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            457788999999999999999999954

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.60  E-value=0.11  Score=28.38  Aligned_cols=28  Identities=25%  Similarity=0.583  Sum_probs=24.7

Q ss_pred             Cceecc--cCCCccCCchhHHHHhhhhcCC
Q 041528            9 KLFVCK--YCNKRYPCGKSLGGHIRTHMNN   36 (527)
Q Consensus         9 ~~~~C~--~C~k~f~~~~~L~~H~~~H~~~   36 (527)
                      +.|.|.  .|+-.|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            468886  4999999999999999999885

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.56  E-value=0.17  Score=30.95  Aligned_cols=31  Identities=13%  Similarity=0.225  Sum_probs=26.0

Q ss_pred             CCCceecccCCCccCCchhHHHHhhhhcCCC
Q 041528            7 KKKLFVCKYCNKRYPCGKSLGGHIRTHMNNG   37 (527)
Q Consensus         7 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~   37 (527)
                      .+.|-.|++|+-....+.+|++|+..-+-.+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            5789999999999999999999997544333

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.26  E-value=0.1  Score=31.03  Aligned_cols=25  Identities=20%  Similarity=0.352  Sum_probs=19.8

Q ss_pred             CcccccCCCCcccccCccccccccccCCCCCccCCCcCcc
Q 041528          430 KFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRV  469 (527)
Q Consensus       430 ~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~  469 (527)
                      -|.|..||-.+               .|+.|-.|++||..
T Consensus         5 ~~~C~vCG~i~---------------~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           5 VYICPICGYTA---------------VDEAPEYCPVCGAP   29 (37)
T ss_dssp             EEECTTTCCEE---------------ESCCCSBCTTTCCB
T ss_pred             EEECCCCCCEe---------------cCCCCCcCCCCCCc
Confidence            46688888776               57889999999863

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.00  E-value=0.095  Score=28.09  Aligned_cols=24  Identities=21%  Similarity=0.355  Sum_probs=20.4

Q ss_pred             CccCCCcCccccchhhhccc-cccc
Q 041528          460 GHECPFCFRVFKSGQALGGH-KRSH  483 (527)
Q Consensus       460 p~~C~iC~k~F~~~~~L~~H-~r~H  483 (527)
                      -|.|..|||...+...++.| |.-|
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            38899999999999999999 4444

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.71  E-value=0.14  Score=28.48  Aligned_cols=25  Identities=24%  Similarity=0.315  Sum_probs=21.7

Q ss_pred             CCCccCCCcCccccchhhhcccccc
Q 041528          458 SKGHECPFCFRVFKSGQALGGHKRS  482 (527)
Q Consensus       458 ekp~~C~iC~k~F~~~~~L~~H~r~  482 (527)
                      .-.|.|.-||-+|.+.+.|..|+.-
T Consensus         6 parf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ccceeccccceeecChhHHHhhhhe
Confidence            4568999999999999999999753

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.30  E-value=0.093  Score=29.23  Aligned_cols=22  Identities=41%  Similarity=0.875  Sum_probs=20.4

Q ss_pred             CccccccccccccCcccccccc
Q 041528          375 SQFKCLTCNKVFHSPRSLWGHT  396 (527)
Q Consensus       375 ~~~~C~~Cgk~F~~~~~L~~H~  396 (527)
                      ..|.|.-||-.|.+.+.|..|+
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            4699999999999999999996

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.15  E-value=0.088  Score=35.96  Aligned_cols=24  Identities=38%  Similarity=0.521  Sum_probs=21.8

Q ss_pred             CCccCCCcCccccchhhhcccccc
Q 041528          459 KGHECPFCFRVFKSGQALGGHKRS  482 (527)
Q Consensus       459 kp~~C~iC~k~F~~~~~L~~H~r~  482 (527)
                      -.|-|-+|+|.|.+...|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            358899999999999999999886

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=84.56  E-value=0.27  Score=27.74  Aligned_cols=26  Identities=23%  Similarity=0.477  Sum_probs=23.6

Q ss_pred             CCCceecccCCCccCCchhHHHHhhh
Q 041528            7 KKKLFVCKYCNKRYPCGKSLGGHIRT   32 (527)
Q Consensus         7 ~~~~~~C~~C~k~f~~~~~L~~H~~~   32 (527)
                      ++-.|.|.+|.++|...+++-+|..+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            56789999999999999999999864

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=81.62  E-value=0.48  Score=25.27  Aligned_cols=24  Identities=21%  Similarity=0.542  Sum_probs=19.5

Q ss_pred             cccccc--ccccccChhhHHHHH-hhh
Q 041528           98 EMVCKE--CGKVFQSLKALCGHM-ACH  121 (527)
Q Consensus        98 ~~~C~~--Cgk~F~~~~~L~~H~-~~H  121 (527)
                      .|.|.-  |..+|.++.+++.|. |.|
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhc
Confidence            466654  999999999999998 555

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=80.57  E-value=0.29  Score=28.72  Aligned_cols=25  Identities=28%  Similarity=0.501  Sum_probs=19.2

Q ss_pred             CcccccCCCCcccccCccccccccccCCCCCccCCCcCcc
Q 041528          430 KFCKSVNGKTPIAQNLSTNVDKRLGSKKSKGHECPFCFRV  469 (527)
Q Consensus       430 ~~~c~~C~K~f~~~~~~~l~~h~~~Ht~ekp~~C~iC~k~  469 (527)
                      -|.|..||-..               .|+-|-+|++||..
T Consensus         5 ~~vC~vCGyi~---------------~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           5 FHLCPICGYIH---------------KGEDFEKCPICFRP   29 (36)
T ss_dssp             EEECSSSCCEE---------------ESSCCSBCTTTCCB
T ss_pred             EEECCCCCCEe---------------eCCCCCcCCCCCCc
Confidence            46688887765               57889999999853